Query 004456
Match_columns 752
No_of_seqs 332 out of 3830
Neff 10.4
Searched_HMMs 29240
Date Tue Mar 26 01:45:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 9.9E-55 3.4E-59 503.3 52.0 612 5-745 36-729 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 1.4E-51 4.6E-56 479.4 58.4 588 6-742 65-740 (741)
3 2z3z_A Dipeptidyl aminopeptida 100.0 1.4E-50 4.7E-55 468.1 56.8 566 32-741 83-706 (706)
4 3azo_A Aminopeptidase; POP fam 100.0 5.7E-50 1.9E-54 459.4 58.6 576 32-745 25-652 (662)
5 1xfd_A DIP, dipeptidyl aminope 100.0 1.5E-51 5.1E-56 477.7 44.8 613 5-742 37-722 (723)
6 3o4h_A Acylamino-acid-releasin 100.0 2.1E-50 7.1E-55 455.2 49.7 544 32-743 23-581 (582)
7 1z68_A Fibroblast activation p 100.0 4E-50 1.4E-54 465.0 48.6 604 4-742 35-719 (719)
8 2bkl_A Prolyl endopeptidase; m 100.0 1.1E-48 3.8E-53 449.4 59.5 589 36-751 73-685 (695)
9 2xdw_A Prolyl endopeptidase; a 100.0 5.2E-48 1.8E-52 445.2 60.2 587 32-744 75-707 (710)
10 3iuj_A Prolyl endopeptidase; h 100.0 6E-47 2E-51 433.6 59.3 581 36-745 82-688 (693)
11 1yr2_A Prolyl oligopeptidase; 100.0 5E-47 1.7E-51 438.6 56.2 582 36-746 112-722 (741)
12 2xe4_A Oligopeptidase B; hydro 100.0 4.3E-44 1.5E-48 411.8 54.5 570 32-744 118-744 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 4.5E-35 1.5E-39 327.8 50.7 509 157-744 156-709 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 1.8E-25 6.1E-30 238.1 30.0 354 6-463 12-386 (388)
15 4a5s_A Dipeptidyl peptidase 4 99.9 1.6E-23 5.3E-28 242.2 29.7 334 32-468 18-408 (740)
16 3c5m_A Oligogalacturonate lyas 99.9 3.2E-23 1.1E-27 221.1 26.2 339 19-468 21-391 (396)
17 1k32_A Tricorn protease; prote 99.9 4.6E-23 1.6E-27 247.5 30.5 375 5-469 33-469 (1045)
18 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-21 3.8E-26 227.5 35.5 330 32-469 38-423 (741)
19 3f67_A Putative dienelactone h 99.9 1.5E-22 5.2E-27 199.8 23.2 219 479-740 3-241 (241)
20 3hxk_A Sugar hydrolase; alpha- 99.9 8.5E-23 2.9E-27 206.2 21.0 238 486-746 18-271 (276)
21 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 3.1E-22 1.1E-26 212.3 26.0 233 479-745 124-368 (386)
22 1xfd_A DIP, dipeptidyl aminope 99.9 3.8E-22 1.3E-26 230.8 28.8 339 32-468 18-403 (723)
23 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.6E-22 1.6E-26 212.9 27.1 254 41-414 142-397 (415)
24 4ao6_A Esterase; hydrolase, th 99.9 3.4E-22 1.2E-26 199.0 22.3 230 460-742 9-259 (259)
25 3bxp_A Putative lipase/esteras 99.9 2.8E-22 9.7E-27 202.5 21.7 237 480-741 2-271 (277)
26 2i3d_A AGR_C_3351P, hypothetic 99.9 3.4E-21 1.2E-25 191.1 28.3 217 480-746 19-238 (249)
27 3pe7_A Oligogalacturonate lyas 99.9 2.2E-21 7.5E-26 206.4 28.8 310 61-472 10-340 (388)
28 3ebl_A Gibberellin receptor GI 99.9 1.3E-21 4.5E-26 204.8 25.8 245 478-746 60-356 (365)
29 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.6E-21 8.8E-26 207.1 26.3 250 5-365 159-410 (415)
30 3ga7_A Acetyl esterase; phosph 99.9 3.4E-21 1.2E-25 199.3 25.4 235 478-743 59-324 (326)
31 1z68_A Fibroblast activation p 99.9 1.6E-21 5.3E-26 225.4 24.5 331 33-468 18-402 (719)
32 1vlq_A Acetyl xylan esterase; 99.9 2.8E-21 9.5E-26 201.2 22.5 234 477-743 63-336 (337)
33 3ksr_A Putative serine hydrola 99.9 1.5E-21 5.1E-26 198.6 19.9 232 480-744 4-244 (290)
34 2wtm_A EST1E; hydrolase; 1.60A 99.9 8.5E-21 2.9E-25 188.5 24.7 227 485-742 4-250 (251)
35 3hlk_A Acyl-coenzyme A thioest 99.9 3.6E-21 1.2E-25 207.3 22.4 232 481-745 150-431 (446)
36 1zi8_A Carboxymethylenebutenol 99.9 1.4E-21 4.8E-26 192.1 17.5 208 482-743 3-234 (236)
37 3bjr_A Putative carboxylestera 99.9 5.5E-22 1.9E-26 201.0 14.8 240 477-740 14-282 (283)
38 3k2i_A Acyl-coenzyme A thioest 99.9 1.9E-21 6.5E-26 208.6 19.8 232 481-745 134-415 (422)
39 3fcy_A Xylan esterase 1; alpha 99.9 4.8E-21 1.7E-25 200.2 21.7 228 478-740 78-344 (346)
40 2o2g_A Dienelactone hydrolase; 99.9 4.6E-21 1.6E-25 186.5 19.4 210 478-742 8-223 (223)
41 1l7a_A Cephalosporin C deacety 99.9 9.2E-21 3.2E-25 195.4 22.7 231 478-742 52-317 (318)
42 2ojh_A Uncharacterized protein 99.9 5.7E-20 1.9E-24 186.9 28.2 264 3-373 20-292 (297)
43 3doh_A Esterase; alpha-beta hy 99.9 1.5E-20 5.2E-25 198.6 23.4 226 481-740 143-378 (380)
44 3fak_A Esterase/lipase, ESTE5; 99.9 1.2E-20 4.1E-25 194.4 21.9 234 478-746 55-313 (322)
45 3trd_A Alpha/beta hydrolase; c 99.9 1.8E-20 6E-25 180.3 21.1 204 480-737 4-207 (208)
46 2gop_A Trilobed protease; beta 99.9 8.8E-20 3E-24 190.7 28.0 309 30-474 14-343 (347)
47 4fbl_A LIPS lipolytic enzyme; 99.9 1.2E-20 4E-25 190.7 20.1 202 513-740 51-281 (281)
48 3i6y_A Esterase APC40077; lipa 99.9 5.4E-21 1.9E-25 193.4 16.0 239 480-742 15-279 (280)
49 2fuk_A XC6422 protein; A/B hyd 99.8 5.5E-20 1.9E-24 178.5 21.8 211 480-743 8-218 (220)
50 2o7r_A CXE carboxylesterase; a 99.8 3.1E-20 1.1E-24 193.2 21.2 281 437-744 6-334 (338)
51 2z3z_A Dipeptidyl aminopeptida 99.8 2.2E-19 7.6E-24 206.9 30.4 313 5-407 101-438 (706)
52 3e4d_A Esterase D; S-formylglu 99.8 7.9E-21 2.7E-25 191.9 16.0 237 480-742 13-278 (278)
53 2hdw_A Hypothetical protein PA 99.8 2.7E-20 9.1E-25 196.4 20.7 237 477-741 63-367 (367)
54 3ain_A 303AA long hypothetical 99.8 1.9E-19 6.4E-24 185.3 26.4 235 478-743 61-322 (323)
55 3qh4_A Esterase LIPW; structur 99.8 2.1E-20 7.2E-25 192.1 19.0 235 477-742 55-316 (317)
56 3ls2_A S-formylglutathione hyd 99.8 1.2E-20 4E-25 190.9 16.1 239 480-742 13-279 (280)
57 3fcx_A FGH, esterase D, S-form 99.8 6.9E-21 2.4E-25 192.8 14.1 241 481-742 15-281 (282)
58 1k32_A Tricorn protease; prote 99.8 4.8E-19 1.6E-23 212.6 32.4 247 6-372 227-491 (1045)
59 2hm7_A Carboxylesterase; alpha 99.8 7.9E-20 2.7E-24 187.7 21.8 235 478-742 44-310 (310)
60 3hju_A Monoglyceride lipase; a 99.8 2.6E-19 8.8E-24 186.8 25.9 237 478-744 30-315 (342)
61 3c5m_A Oligogalacturonate lyas 99.8 1.6E-19 5.4E-24 192.4 24.8 305 5-410 60-390 (396)
62 3pfb_A Cinnamoyl esterase; alp 99.8 1.9E-19 6.6E-24 180.7 23.7 228 481-740 21-267 (270)
63 1lzl_A Heroin esterase; alpha/ 99.8 1.4E-19 4.9E-24 186.9 22.2 238 478-744 47-319 (323)
64 2wir_A Pesta, alpha/beta hydro 99.8 7.9E-20 2.7E-24 188.0 19.6 233 479-742 48-312 (313)
65 1jfr_A Lipase; serine hydrolas 99.8 2.8E-19 9.6E-24 178.7 22.7 206 480-745 23-235 (262)
66 3h04_A Uncharacterized protein 99.8 7.6E-19 2.6E-23 176.5 26.1 225 482-742 3-274 (275)
67 2zsh_A Probable gibberellin re 99.8 6E-19 2.1E-23 184.4 26.1 238 478-739 68-350 (351)
68 3k6k_A Esterase/lipase; alpha/ 99.8 9.7E-20 3.3E-24 187.7 19.5 233 478-746 56-313 (322)
69 3pe6_A Monoglyceride lipase; a 99.8 8.4E-19 2.9E-23 178.9 25.3 236 480-745 14-298 (303)
70 2c7b_A Carboxylesterase, ESTE1 99.8 1.7E-19 5.7E-24 185.4 19.9 233 479-742 45-309 (311)
71 4e15_A Kynurenine formamidase; 99.8 1.4E-20 4.8E-25 192.6 11.4 228 482-739 58-299 (303)
72 1mpx_A Alpha-amino acid ester 99.8 2.8E-19 9.6E-24 199.6 22.8 249 479-744 22-357 (615)
73 3vis_A Esterase; alpha/beta-hy 99.8 1.7E-19 5.7E-24 184.6 18.2 188 496-744 84-278 (306)
74 1jjf_A Xylanase Z, endo-1,4-be 99.8 2.3E-18 7.7E-23 172.7 26.0 222 478-741 28-261 (268)
75 2ojh_A Uncharacterized protein 99.8 2.7E-18 9.3E-23 174.4 27.0 270 59-448 19-293 (297)
76 2pbl_A Putative esterase/lipas 99.8 3E-19 1E-23 178.5 18.0 201 483-721 39-245 (262)
77 1l0q_A Surface layer protein; 99.8 7.7E-17 2.6E-21 171.3 37.5 358 4-504 11-386 (391)
78 1fj2_A Protein (acyl protein t 99.8 1.1E-18 3.8E-23 170.7 21.3 198 499-743 14-230 (232)
79 2uz0_A Esterase, tributyrin es 99.8 7E-19 2.4E-23 175.9 20.3 242 480-744 5-259 (263)
80 1jkm_A Brefeldin A esterase; s 99.8 6.5E-19 2.2E-23 184.5 20.7 238 479-741 79-358 (361)
81 3fnb_A Acylaminoacyl peptidase 99.8 1.5E-19 5.2E-24 192.7 16.0 235 479-744 132-404 (405)
82 1auo_A Carboxylesterase; hydro 99.8 2.6E-18 9E-23 166.3 23.4 187 511-742 12-218 (218)
83 4b6g_A Putative esterase; hydr 99.8 7E-20 2.4E-24 185.4 12.1 237 481-742 21-283 (283)
84 4h0c_A Phospholipase/carboxyle 99.8 3.3E-19 1.1E-23 170.4 16.1 184 512-738 21-209 (210)
85 1ufo_A Hypothetical protein TT 99.8 1.8E-18 6.2E-23 169.8 21.9 212 490-743 10-237 (238)
86 2b9v_A Alpha-amino acid ester 99.8 6.8E-19 2.3E-23 197.0 21.0 251 480-744 35-369 (652)
87 4fhz_A Phospholipase/carboxyle 99.8 1.3E-18 4.4E-23 173.8 20.6 132 583-744 138-269 (285)
88 3azo_A Aminopeptidase; POP fam 99.8 2.7E-18 9.4E-23 196.2 25.5 285 19-414 58-379 (662)
89 3mve_A FRSA, UPF0255 protein V 99.8 4.5E-19 1.5E-23 188.5 17.3 230 479-742 165-414 (415)
90 3dkr_A Esterase D; alpha beta 99.8 1.9E-18 6.6E-23 171.0 20.0 204 513-741 22-249 (251)
91 1k8q_A Triacylglycerol lipase, 99.8 4.5E-18 1.5E-22 179.8 23.6 241 479-740 24-377 (377)
92 3og9_A Protein YAHD A copper i 99.8 4.9E-18 1.7E-22 163.2 21.3 180 512-740 16-208 (209)
93 3llc_A Putative hydrolase; str 99.8 5.1E-18 1.7E-22 170.1 22.1 227 481-739 10-268 (270)
94 1lns_A X-prolyl dipeptidyl ami 99.8 5.7E-18 2E-22 192.3 23.2 245 489-745 180-525 (763)
95 1jji_A Carboxylesterase; alpha 99.8 1.8E-18 6.2E-23 177.4 17.5 226 481-739 55-310 (311)
96 3vgz_A Uncharacterized protein 99.8 1E-16 3.4E-21 167.7 31.1 278 30-447 40-334 (353)
97 3bdi_A Uncharacterized protein 99.8 1.9E-17 6.7E-22 158.6 23.2 198 482-739 4-206 (207)
98 3u0v_A Lysophospholipase-like 99.8 1.4E-17 4.9E-22 163.7 22.5 190 512-744 22-234 (239)
99 3cn9_A Carboxylesterase; alpha 99.8 2.1E-17 7.3E-22 160.9 23.4 185 511-741 22-226 (226)
100 3d7r_A Esterase; alpha/beta fo 99.8 5.9E-18 2E-22 174.8 20.4 216 495-743 84-324 (326)
101 4f0j_A Probable hydrolytic enz 99.8 1.3E-17 4.4E-22 171.2 22.5 229 480-740 18-314 (315)
102 3rm3_A MGLP, thermostable mono 99.8 1.2E-17 4.1E-22 167.6 21.3 202 513-741 40-269 (270)
103 2h1i_A Carboxylesterase; struc 99.8 2.2E-17 7.7E-22 160.8 21.6 181 512-741 37-226 (226)
104 2gop_A Trilobed protease; beta 99.8 3.8E-17 1.3E-21 170.6 24.5 296 3-415 41-341 (347)
105 1tht_A Thioesterase; 2.10A {Vi 99.8 6.1E-17 2.1E-21 164.8 24.4 228 481-740 6-264 (305)
106 2ymu_A WD-40 repeat protein; u 99.8 2.6E-16 8.9E-21 176.6 31.9 291 6-458 285-577 (577)
107 2xdw_A Prolyl endopeptidase; a 99.8 1.5E-16 5E-21 183.0 29.7 298 6-411 99-423 (710)
108 2ymu_A WD-40 repeat protein; u 99.8 4.2E-16 1.4E-20 174.9 32.8 300 6-467 244-545 (577)
109 1vkh_A Putative serine hydrola 99.8 5.4E-18 1.9E-22 170.5 15.4 200 511-737 39-272 (273)
110 3d0k_A Putative poly(3-hydroxy 99.8 2E-17 6.7E-22 169.2 18.8 226 482-739 24-286 (304)
111 3o4h_A Acylamino-acid-releasin 99.7 1.7E-17 5.7E-22 186.4 19.2 264 7-410 46-320 (582)
112 3b5e_A MLL8374 protein; NP_108 99.7 6.4E-17 2.2E-21 157.1 20.6 197 491-742 14-218 (223)
113 3s25_A Hypothetical 7-bladed b 99.7 2.9E-16 9.9E-21 157.9 25.5 282 35-468 18-300 (302)
114 4ezi_A Uncharacterized protein 99.7 2.6E-16 8.9E-21 163.4 25.5 247 478-745 39-374 (377)
115 1sfr_A Antigen 85-A; alpha/bet 99.7 5.7E-17 2E-21 165.3 20.2 242 480-746 7-288 (304)
116 2r8b_A AGR_C_4453P, uncharacte 99.7 1.1E-17 3.9E-22 165.8 14.3 181 512-743 61-250 (251)
117 3ia2_A Arylesterase; alpha-bet 99.7 1.2E-16 4.2E-21 160.3 22.0 212 487-738 3-270 (271)
118 3u4y_A Uncharacterized protein 99.7 1E-15 3.5E-20 158.5 29.5 298 36-466 3-309 (331)
119 1gxr_A ESG1, transducin-like e 99.7 2.4E-15 8.4E-20 155.8 32.2 279 29-458 50-334 (337)
120 1qlw_A Esterase; anisotropic r 99.7 7.4E-17 2.5E-21 166.4 20.5 115 603-743 199-323 (328)
121 1l0q_A Surface layer protein; 99.7 1.1E-15 3.7E-20 162.4 30.0 270 59-466 9-280 (391)
122 3u4y_A Uncharacterized protein 99.7 1E-15 3.4E-20 158.6 28.8 277 5-409 20-309 (331)
123 3i2k_A Cocaine esterase; alpha 99.7 3.9E-17 1.3E-21 180.9 19.0 238 481-745 8-326 (587)
124 2bkl_A Prolyl endopeptidase; m 99.7 6.7E-16 2.3E-20 176.9 29.9 295 6-413 95-406 (695)
125 3iuj_A Prolyl endopeptidase; h 99.7 4.4E-16 1.5E-20 177.9 27.8 273 32-414 130-415 (693)
126 1a88_A Chloroperoxidase L; hal 99.7 2.4E-16 8.1E-21 158.6 22.7 214 487-738 3-274 (275)
127 3bws_A Protein LP49; two-domai 99.7 1.6E-15 5.5E-20 163.5 30.8 316 19-460 111-431 (433)
128 4g56_B MGC81050 protein; prote 99.7 1.3E-15 4.3E-20 159.5 28.8 288 32-461 44-343 (357)
129 2fx5_A Lipase; alpha-beta hydr 99.7 8.3E-17 2.8E-21 160.2 18.4 187 497-743 34-230 (258)
130 2qjw_A Uncharacterized protein 99.7 7.5E-17 2.5E-21 150.2 16.9 173 512-739 3-175 (176)
131 1tqh_A Carboxylesterase precur 99.7 4E-17 1.4E-21 161.3 15.9 201 513-740 16-245 (247)
132 3hfq_A Uncharacterized protein 99.7 3E-16 1E-20 163.8 23.3 286 5-411 16-326 (347)
133 1zoi_A Esterase; alpha/beta hy 99.7 1.7E-16 5.9E-21 159.7 20.7 214 487-738 4-275 (276)
134 1r88_A MPT51/MPB51 antigen; AL 99.7 1.9E-16 6.3E-21 159.3 20.8 238 478-742 7-274 (280)
135 1gkl_A Endo-1,4-beta-xylanase 99.7 4.8E-16 1.6E-20 157.4 23.6 206 479-720 38-272 (297)
136 2qru_A Uncharacterized protein 99.7 3.1E-16 1.1E-20 157.5 21.9 215 490-739 12-273 (274)
137 2ocg_A Valacyclovir hydrolase; 99.7 1.7E-16 5.8E-21 157.6 19.6 211 491-737 10-253 (254)
138 3v48_A Aminohydrolase, putativ 99.7 1.5E-16 5.2E-21 159.3 18.9 198 513-742 15-262 (268)
139 3zwl_B Eukaryotic translation 99.7 4.1E-15 1.4E-19 156.2 30.5 308 32-462 34-347 (369)
140 1nr0_A Actin interacting prote 99.7 2.4E-15 8.3E-20 169.6 30.5 234 32-372 20-259 (611)
141 4f21_A Carboxylesterase/phosph 99.7 1.8E-16 6.2E-21 155.0 18.4 132 583-742 114-245 (246)
142 3om8_A Probable hydrolase; str 99.7 2.1E-16 7.4E-21 158.0 19.4 211 487-738 9-265 (266)
143 3vdx_A Designed 16NM tetrahedr 99.7 7.2E-16 2.5E-20 166.4 24.4 220 482-742 3-281 (456)
144 3ow8_A WD repeat-containing pr 99.7 5.4E-15 1.9E-19 152.2 29.9 274 32-459 34-319 (321)
145 1a8s_A Chloroperoxidase F; hal 99.7 5.4E-16 1.8E-20 155.8 21.6 212 487-738 3-272 (273)
146 1mtz_A Proline iminopeptidase; 99.7 1.9E-16 6.3E-21 161.0 18.3 214 490-741 12-293 (293)
147 3u1t_A DMMA haloalkane dehalog 99.7 3E-16 1E-20 160.5 19.9 214 491-745 17-301 (309)
148 1a8q_A Bromoperoxidase A1; hal 99.7 9.7E-16 3.3E-20 154.0 23.0 213 487-738 3-273 (274)
149 2yys_A Proline iminopeptidase- 99.7 3.4E-16 1.2E-20 158.4 19.5 214 484-740 4-276 (286)
150 3scy_A Hypothetical bacterial 99.7 2.3E-15 7.8E-20 158.0 26.3 284 5-411 27-346 (361)
151 3fob_A Bromoperoxidase; struct 99.7 5.1E-16 1.8E-20 156.7 20.4 195 513-738 27-280 (281)
152 3iii_A COCE/NOND family hydrol 99.7 1.5E-16 5.3E-21 173.3 17.6 249 479-745 38-324 (560)
153 1yr2_A Prolyl oligopeptidase; 99.7 2E-15 6.8E-20 174.2 27.8 294 6-411 134-448 (741)
154 1brt_A Bromoperoxidase A2; hal 99.7 4.9E-16 1.7E-20 156.5 19.8 194 514-738 24-276 (277)
155 3d59_A Platelet-activating fac 99.7 3.7E-16 1.3E-20 165.1 19.5 186 511-744 96-353 (383)
156 3dqz_A Alpha-hydroxynitrIle ly 99.7 2.3E-16 7.8E-21 156.9 16.7 199 513-741 4-258 (258)
157 2y6u_A Peroxisomal membrane pr 99.7 9.6E-17 3.3E-21 171.1 14.6 233 487-744 25-348 (398)
158 3nuz_A Putative acetyl xylan e 99.7 1.1E-16 3.9E-21 169.3 14.8 219 477-714 87-346 (398)
159 3g8y_A SUSD/RAGB-associated es 99.7 3.8E-16 1.3E-20 165.0 18.8 154 477-638 82-260 (391)
160 1q0r_A RDMC, aclacinomycin met 99.7 1.3E-15 4.5E-20 155.2 22.0 211 490-742 8-295 (298)
161 1imj_A CIB, CCG1-interacting f 99.7 2.9E-17 1E-21 157.9 9.1 189 490-739 14-208 (210)
162 3r0v_A Alpha/beta hydrolase fo 99.7 1.8E-15 6.2E-20 150.6 22.3 206 486-738 6-261 (262)
163 3sty_A Methylketone synthase 1 99.7 2.6E-16 8.8E-21 157.4 16.1 199 512-740 11-266 (267)
164 1r5m_A SIR4-interacting protei 99.7 9.1E-15 3.1E-19 156.8 29.2 254 32-406 47-363 (425)
165 3qit_A CURM TE, polyketide syn 99.7 6.7E-16 2.3E-20 155.7 19.2 210 483-733 5-283 (286)
166 2qm0_A BES; alpha-beta structu 99.7 8E-17 2.7E-21 161.6 12.0 227 478-737 14-272 (275)
167 2pl5_A Homoserine O-acetyltran 99.7 1.1E-15 3.8E-20 160.7 20.5 178 551-740 85-365 (366)
168 1gxr_A ESG1, transducin-like e 99.7 1.6E-14 5.3E-19 149.7 28.9 251 5-371 72-325 (337)
169 3qvm_A OLEI00960; structural g 99.7 2E-16 6.7E-21 159.4 14.0 197 513-741 28-279 (282)
170 3guu_A Lipase A; protein struc 99.7 3.6E-15 1.2E-19 156.7 23.9 249 480-751 73-416 (462)
171 3oos_A Alpha/beta hydrolase fa 99.7 2E-16 6.9E-21 158.9 14.0 193 513-737 23-278 (278)
172 4gqb_B Methylosome protein 50; 99.7 2.1E-14 7.3E-19 149.0 29.7 289 32-462 32-332 (344)
173 2xua_A PCAD, 3-oxoadipate ENOL 99.7 1.9E-15 6.4E-20 151.2 20.7 211 490-739 9-264 (266)
174 4dnp_A DAD2; alpha/beta hydrol 99.7 3.8E-16 1.3E-20 156.1 15.7 197 513-740 20-269 (269)
175 3ei3_B DNA damage-binding prot 99.7 8.4E-14 2.9E-18 147.3 34.5 299 32-461 75-382 (383)
176 2r11_A Carboxylesterase NP; 26 99.7 6.5E-16 2.2E-20 158.1 17.5 217 482-738 45-305 (306)
177 3e0x_A Lipase-esterase related 99.7 2.9E-16 1E-20 154.5 14.2 195 513-737 16-245 (245)
178 3s25_A Hypothetical 7-bladed b 99.7 1.1E-14 3.9E-19 146.3 25.7 239 5-371 37-280 (302)
179 3fsg_A Alpha/beta superfamily 99.7 3.7E-16 1.3E-20 156.6 14.3 200 513-742 21-270 (272)
180 3i28_A Epoxide hydrolase 2; ar 99.7 1.5E-15 5.1E-20 169.5 20.8 224 481-745 236-550 (555)
181 1hkh_A Gamma lactamase; hydrol 99.7 9.3E-16 3.2E-20 154.6 17.3 194 514-738 24-278 (279)
182 3hfq_A Uncharacterized protein 99.7 9.1E-15 3.1E-19 152.5 25.2 298 61-469 17-327 (347)
183 3hss_A Putative bromoperoxidas 99.7 7E-16 2.4E-20 156.6 16.1 197 513-739 43-290 (293)
184 3ow8_A WD repeat-containing pr 99.7 1.7E-14 5.7E-19 148.5 26.4 224 32-371 82-309 (321)
185 3kxp_A Alpha-(N-acetylaminomet 99.7 1.4E-15 4.9E-20 156.1 18.4 208 490-739 55-314 (314)
186 1ri6_A Putative isomerase YBHE 99.7 2.9E-14 1E-18 148.1 28.5 284 5-411 15-317 (343)
187 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 2.7E-15 9.4E-20 151.7 20.0 198 513-739 33-285 (286)
188 4g9e_A AHL-lactonase, alpha/be 99.7 2.1E-16 7.1E-21 159.0 11.6 222 482-745 3-274 (279)
189 1c4x_A BPHD, protein (2-hydrox 99.7 2.1E-15 7.1E-20 152.6 18.9 214 489-739 13-284 (285)
190 1pby_B Quinohemoprotein amine 99.7 4.7E-14 1.6E-18 146.1 29.0 288 4-411 10-317 (337)
191 1dqz_A 85C, protein (antigen 8 99.7 1.9E-15 6.6E-20 152.2 17.9 237 480-743 4-280 (280)
192 3i1i_A Homoserine O-acetyltran 99.7 1.5E-15 5E-20 160.4 17.7 72 668-742 302-374 (377)
193 4h5i_A Guanine nucleotide-exch 99.7 3.7E-14 1.3E-18 148.8 28.1 206 176-461 135-343 (365)
194 3fm0_A Protein CIAO1; WDR39,SG 99.7 2.9E-14 1E-18 148.4 27.2 196 32-330 18-224 (345)
195 4fle_A Esterase; structural ge 99.7 4.2E-16 1.4E-20 148.7 12.1 183 513-738 2-190 (202)
196 1got_B GT-beta; complex (GTP-b 99.7 8.3E-14 2.8E-18 144.7 30.5 267 32-445 57-331 (340)
197 4ery_A WD repeat-containing pr 99.7 2.3E-13 8E-18 139.4 33.3 278 32-458 25-309 (312)
198 3nwo_A PIP, proline iminopepti 99.7 2.1E-15 7.3E-20 155.9 18.0 217 490-742 35-324 (330)
199 2pm9_A Protein WEB1, protein t 99.6 1.7E-14 6E-19 154.3 25.6 308 32-464 14-340 (416)
200 1erj_A Transcriptional repress 99.6 4.7E-14 1.6E-18 149.8 28.4 288 32-459 66-387 (393)
201 2qs9_A Retinoblastoma-binding 99.6 3E-15 1E-19 141.8 16.8 186 513-745 4-190 (194)
202 2b61_A Homoserine O-acetyltran 99.6 3.7E-15 1.3E-19 157.4 19.4 177 551-739 94-376 (377)
203 2pm9_A Protein WEB1, protein t 99.6 2.1E-14 7.2E-19 153.7 25.0 258 4-371 44-325 (416)
204 3frx_A Guanine nucleotide-bind 99.6 8.7E-14 3E-18 143.1 28.2 282 32-461 19-317 (319)
205 1pby_B Quinohemoprotein amine 99.6 8.6E-14 2.9E-18 144.1 28.4 277 59-466 8-315 (337)
206 1nr0_A Actin interacting prote 99.6 2.2E-13 7.6E-18 153.5 33.8 219 5-334 39-271 (611)
207 3c8d_A Enterochelin esterase; 99.6 1.6E-15 5.4E-20 160.0 15.0 228 478-742 164-399 (403)
208 2wue_A 2-hydroxy-6-OXO-6-pheny 99.6 8.9E-15 3.1E-19 148.3 20.1 213 490-739 20-289 (291)
209 2ynn_A Coatomer subunit beta'; 99.6 1.9E-13 6.5E-18 139.5 30.1 243 32-411 15-266 (304)
210 1j1i_A META cleavage compound 99.6 4E-15 1.4E-19 151.3 17.5 218 490-745 23-287 (296)
211 3bws_A Protein LP49; two-domai 99.6 1.4E-13 4.8E-18 148.2 30.6 301 33-467 63-396 (433)
212 1wom_A RSBQ, sigma factor SIGB 99.6 3.2E-15 1.1E-19 149.9 16.5 197 513-741 20-271 (271)
213 3mkq_A Coatomer beta'-subunit; 99.6 6.8E-14 2.3E-18 163.9 30.3 242 32-411 15-266 (814)
214 2xzm_R RACK1; ribosome, transl 99.6 1.3E-13 4.5E-18 143.4 29.1 290 32-461 23-340 (343)
215 1iup_A META-cleavage product h 99.6 7.7E-15 2.6E-19 148.1 19.1 211 491-740 13-273 (282)
216 2cjp_A Epoxide hydrolase; HET: 99.6 6.2E-15 2.1E-19 152.4 18.8 215 490-739 18-327 (328)
217 1wm1_A Proline iminopeptidase; 99.6 8.7E-15 3E-19 150.5 19.8 216 484-738 16-316 (317)
218 2e3j_A Epoxide hydrolase EPHB; 99.6 7.8E-15 2.7E-19 153.5 19.7 118 490-637 10-131 (356)
219 1uxo_A YDEN protein; hydrolase 99.6 1.8E-15 6.2E-20 143.0 13.5 183 513-743 4-189 (192)
220 2wfl_A Polyneuridine-aldehyde 99.6 8.8E-15 3E-19 146.0 19.1 196 513-738 10-263 (264)
221 3bf7_A Esterase YBFF; thioeste 99.6 3E-15 1E-19 148.6 15.6 196 513-740 16-255 (255)
222 1vyh_C Platelet-activating fac 99.6 1.4E-13 4.7E-18 147.0 29.5 274 32-458 110-408 (410)
223 3g9x_A Haloalkane dehalogenase 99.6 2.4E-15 8.1E-20 153.0 14.9 210 491-740 18-293 (299)
224 2pbi_B Guanine nucleotide-bind 99.6 2.7E-13 9.1E-18 141.6 30.7 268 32-445 66-345 (354)
225 2xmz_A Hydrolase, alpha/beta h 99.6 2.6E-15 8.9E-20 150.4 14.6 195 513-740 16-266 (269)
226 3vgz_A Uncharacterized protein 99.6 1.4E-13 4.6E-18 143.7 28.3 257 6-373 70-334 (353)
227 4e54_B DNA damage-binding prot 99.6 6.5E-14 2.2E-18 151.0 26.5 304 32-465 121-434 (435)
228 3iz6_a 40S ribosomal protein R 99.6 4.5E-13 1.5E-17 141.4 32.4 297 32-463 68-377 (380)
229 1b6g_A Haloalkane dehalogenase 99.6 9.1E-15 3.1E-19 149.6 18.7 209 493-739 34-308 (310)
230 3p2m_A Possible hydrolase; alp 99.6 3.5E-15 1.2E-19 154.4 15.8 204 493-739 70-329 (330)
231 3vl1_A 26S proteasome regulato 99.6 1.1E-13 3.8E-18 148.3 28.1 319 5-460 78-418 (420)
232 1ri6_A Putative isomerase YBHE 99.6 1.3E-13 4.4E-18 143.2 27.5 286 61-470 14-319 (343)
233 1u2e_A 2-hydroxy-6-ketonona-2, 99.6 1.6E-14 5.5E-19 146.3 19.7 173 549-738 61-287 (289)
234 1azw_A Proline iminopeptidase; 99.6 2.4E-14 8.2E-19 146.9 21.2 120 484-636 13-136 (313)
235 3bwx_A Alpha/beta hydrolase; Y 99.6 3.2E-14 1.1E-18 143.8 21.5 217 482-739 5-284 (285)
236 3r40_A Fluoroacetate dehalogen 99.6 1.3E-14 4.4E-19 148.0 18.6 209 490-740 20-303 (306)
237 2xe4_A Oligopeptidase B; hydro 99.6 8.6E-14 2.9E-18 159.9 27.5 263 32-413 175-467 (751)
238 3bdv_A Uncharacterized protein 99.6 1.1E-14 3.8E-19 137.4 16.6 130 579-742 58-189 (191)
239 2rau_A Putative esterase; NP_3 99.6 5.8E-15 2E-19 154.5 16.0 180 546-740 84-353 (354)
240 2xt0_A Haloalkane dehalogenase 99.6 1.7E-14 5.7E-19 146.7 18.8 208 493-738 33-296 (297)
241 1xkl_A SABP2, salicylic acid-b 99.6 2.2E-14 7.6E-19 143.8 19.3 200 513-742 4-261 (273)
242 1nir_A Nitrite reductase; hemo 99.6 9.1E-13 3.1E-17 145.2 33.5 328 5-468 159-521 (543)
243 3dw8_B Serine/threonine-protei 99.6 3.3E-13 1.1E-17 145.9 29.5 177 175-411 178-380 (447)
244 3vl1_A 26S proteasome regulato 99.6 8.2E-14 2.8E-18 149.4 24.3 275 33-461 59-365 (420)
245 2gzs_A IROE protein; enterobac 99.6 8.7E-15 3E-19 146.6 15.5 224 480-740 11-265 (278)
246 3i2n_A WD repeat-containing pr 99.6 9.1E-14 3.1E-18 145.2 23.9 300 32-462 20-354 (357)
247 2qvb_A Haloalkane dehalogenase 99.6 1.1E-14 3.8E-19 147.9 15.8 209 490-742 15-294 (297)
248 4aez_A CDC20, WD repeat-contai 99.6 6.1E-13 2.1E-17 141.6 30.1 267 61-465 112-384 (401)
249 3zwl_B Eukaryotic translation 99.6 3E-13 1E-17 141.9 27.3 267 5-406 54-348 (369)
250 3fla_A RIFR; alpha-beta hydrol 99.6 1.4E-14 4.8E-19 144.7 16.0 202 512-746 19-255 (267)
251 3h2g_A Esterase; xanthomonas o 99.6 4.2E-14 1.4E-18 150.1 20.1 151 479-638 43-210 (397)
252 2vdu_B TRNA (guanine-N(7)-)-me 99.6 8E-13 2.7E-17 143.1 30.6 235 157-468 125-399 (450)
253 4aez_A CDC20, WD repeat-contai 99.6 7.4E-13 2.5E-17 141.0 29.6 267 4-407 112-383 (401)
254 1m33_A BIOH protein; alpha-bet 99.6 1E-14 3.5E-19 145.0 14.2 190 514-739 13-255 (258)
255 2vat_A Acetyl-COA--deacetylcep 99.6 1.2E-14 4.2E-19 156.9 15.7 69 666-741 374-443 (444)
256 3c6x_A Hydroxynitrilase; atomi 99.6 2.4E-14 8.1E-19 142.2 16.0 198 513-740 3-256 (257)
257 4gqb_B Methylosome protein 50; 99.6 1.7E-13 5.7E-18 142.2 22.6 232 32-371 84-318 (344)
258 3afi_E Haloalkane dehalogenase 99.6 4.7E-14 1.6E-18 144.8 18.1 213 491-743 15-304 (316)
259 3scy_A Hypothetical bacterial 99.6 6.1E-13 2.1E-17 139.4 26.7 296 61-468 28-346 (361)
260 2q0x_A Protein DUF1749, unchar 99.6 3.7E-14 1.3E-18 146.4 17.1 219 483-741 16-295 (335)
261 1sq9_A Antiviral protein SKI8; 99.6 9.3E-13 3.2E-17 139.9 28.4 249 32-412 18-330 (397)
262 1k8k_C P40, ARP2/3 complex 41 99.6 2.1E-13 7.3E-18 143.3 23.1 225 32-370 10-262 (372)
263 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 3.1E-14 1.1E-18 141.9 15.8 210 491-738 7-263 (264)
264 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 2.2E-14 7.5E-19 146.1 15.0 210 490-743 16-296 (302)
265 4g56_B MGC81050 protein; prote 99.6 1.1E-13 3.7E-18 144.7 20.4 232 32-371 96-331 (357)
266 3kda_A CFTR inhibitory factor 99.6 1.4E-13 4.7E-18 140.1 20.6 208 490-741 17-295 (301)
267 3sfz_A APAF-1, apoptotic pepti 99.6 2.7E-13 9.2E-18 166.5 27.0 357 5-465 819-1211(1249)
268 1isp_A Lipase; alpha/beta hydr 99.6 8.3E-14 2.8E-18 130.1 17.1 169 513-740 3-176 (181)
269 2xzm_R RACK1; ribosome, transl 99.6 1.4E-12 4.6E-17 135.7 28.0 256 4-371 48-328 (343)
270 1pgu_A Actin interacting prote 99.6 1.2E-12 4E-17 147.9 29.6 284 32-464 20-331 (615)
271 1ycd_A Hypothetical 27.3 kDa p 99.6 5.5E-15 1.9E-19 145.6 9.0 207 513-743 5-240 (243)
272 3dm0_A Maltose-binding peripla 99.6 1.5E-12 5.1E-17 149.3 30.4 291 32-460 384-692 (694)
273 1ehy_A Protein (soluble epoxid 99.6 3.2E-13 1.1E-17 137.1 22.2 206 490-737 16-293 (294)
274 1yfq_A Cell cycle arrest prote 99.6 1.4E-12 4.9E-17 135.2 27.6 271 32-447 13-313 (342)
275 1pja_A Palmitoyl-protein thioe 99.5 7.6E-14 2.6E-18 142.3 17.2 197 512-737 35-301 (302)
276 3sfz_A APAF-1, apoptotic pepti 99.5 3.6E-12 1.2E-16 156.5 34.7 257 5-372 637-902 (1249)
277 1jof_A Carboxy-CIS,CIS-muconat 99.5 6.5E-13 2.2E-17 139.4 24.2 277 5-371 14-328 (365)
278 1r5m_A SIR4-interacting protei 99.5 5E-13 1.7E-17 143.2 23.5 239 32-334 110-362 (425)
279 3mkq_A Coatomer beta'-subunit; 99.5 1.2E-12 4E-17 153.3 28.6 242 5-367 35-285 (814)
280 3frx_A Guanine nucleotide-bind 99.5 1.2E-12 4E-17 134.6 25.0 229 32-371 67-305 (319)
281 4fol_A FGH, S-formylglutathion 99.5 1.8E-13 6.2E-18 137.0 18.3 246 480-742 12-297 (299)
282 2qmq_A Protein NDRG2, protein 99.5 1.1E-13 3.8E-18 139.8 16.8 213 491-738 19-285 (286)
283 4aow_A Guanine nucleotide-bind 99.5 5.6E-12 1.9E-16 130.6 30.1 289 32-463 40-339 (340)
284 2j04_A TAU60, YPL007P, hypothe 99.5 4E-13 1.4E-17 143.3 20.6 184 175-444 86-285 (588)
285 1jmx_B Amine dehydrogenase; ox 99.5 3.2E-12 1.1E-16 133.0 27.4 289 34-465 3-329 (349)
286 2j04_A TAU60, YPL007P, hypothe 99.5 2E-13 6.9E-18 145.6 17.9 244 30-445 85-349 (588)
287 1got_B GT-beta; complex (GTP-b 99.5 4.5E-12 1.5E-16 131.5 28.0 244 5-372 77-332 (340)
288 1sq9_A Antiviral protein SKI8; 99.5 1.2E-12 4.1E-17 139.0 24.2 230 4-334 35-323 (397)
289 1r3d_A Conserved hypothetical 99.5 1.3E-13 4.3E-18 137.6 15.4 194 513-741 16-263 (264)
290 4e54_B DNA damage-binding prot 99.5 2.1E-12 7.1E-17 139.1 25.5 275 4-408 141-434 (435)
291 3ei3_B DNA damage-binding prot 99.5 2.9E-12 1E-16 135.4 25.8 255 5-371 96-371 (383)
292 2psd_A Renilla-luciferin 2-mon 99.5 2.4E-13 8.3E-18 139.5 16.7 211 490-743 28-308 (318)
293 1vyh_C Platelet-activating fac 99.5 5.1E-12 1.7E-16 134.8 27.5 245 5-371 130-399 (410)
294 3dwl_C Actin-related protein 2 99.5 1.1E-13 3.7E-18 146.1 14.4 233 32-371 13-270 (377)
295 4a11_B DNA excision repair pro 99.5 1E-11 3.5E-16 132.1 29.8 293 31-464 44-368 (408)
296 4h5i_A Guanine nucleotide-exch 99.5 5E-13 1.7E-17 140.1 18.4 202 32-333 135-343 (365)
297 2aq5_A Coronin-1A; WD40 repeat 99.5 2.9E-12 9.9E-17 136.4 24.7 293 34-467 38-348 (402)
298 1erj_A Transcriptional repress 99.5 5.9E-12 2E-16 133.5 26.5 204 33-334 126-342 (393)
299 3qmv_A Thioesterase, REDJ; alp 99.5 2.9E-14 9.9E-19 143.7 7.8 227 480-737 13-280 (280)
300 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 8.2E-13 2.8E-17 132.5 18.2 214 490-740 11-272 (276)
301 1jmx_B Amine dehydrogenase; ox 99.5 5.6E-12 1.9E-16 131.1 25.0 289 4-410 20-331 (349)
302 4ery_A WD repeat-containing pr 99.5 1.5E-11 5E-16 125.9 27.4 224 157-465 45-272 (312)
303 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.5E-12 1.5E-16 131.8 23.7 223 5-331 38-283 (345)
304 3pic_A CIP2; alpha/beta hydrol 99.5 1.7E-12 5.9E-17 129.5 19.3 217 493-748 90-352 (375)
305 2pbi_B Guanine nucleotide-bind 99.5 1.5E-11 5.2E-16 128.2 27.7 246 5-372 86-346 (354)
306 3gff_A IROE-like serine hydrol 99.5 3.8E-13 1.3E-17 137.1 15.0 227 479-743 9-268 (331)
307 2aq5_A Coronin-1A; WD40 repeat 99.5 6.6E-12 2.2E-16 133.7 25.1 248 32-410 83-348 (402)
308 1nir_A Nitrite reductase; hemo 99.5 8.3E-12 2.8E-16 137.6 26.3 297 5-413 200-523 (543)
309 3odt_A Protein DOA1; ubiquitin 99.5 3.2E-11 1.1E-15 123.1 28.8 273 32-465 20-300 (313)
310 4gga_A P55CDC, cell division c 99.5 2.8E-11 9.5E-16 129.6 29.3 283 32-462 107-396 (420)
311 3i2n_A WD repeat-containing pr 99.5 4.2E-12 1.4E-16 132.4 22.3 218 4-333 43-291 (357)
312 4g4g_A 4-O-methyl-glucuronoyl 99.5 2.9E-12 9.8E-17 129.1 19.7 216 494-748 124-386 (433)
313 3k26_A Polycomb protein EED; W 99.5 5.4E-12 1.9E-16 132.1 22.7 289 32-460 20-365 (366)
314 3b12_A Fluoroacetate dehalogen 99.2 7E-15 2.4E-19 149.9 0.0 199 513-743 25-295 (304)
315 2ynn_A Coatomer subunit beta'; 99.4 2.7E-11 9.4E-16 123.4 25.8 221 157-466 35-264 (304)
316 4gga_A P55CDC, cell division c 99.4 4.2E-11 1.4E-15 128.2 28.2 255 5-372 125-384 (420)
317 3l80_A Putative uncharacterize 99.4 7.2E-14 2.5E-18 141.6 5.8 194 513-740 41-289 (292)
318 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.9E-11 9.9E-16 126.7 25.2 249 159-462 62-342 (365)
319 1k8k_C P40, ARP2/3 complex 41 99.4 2.5E-11 8.5E-16 127.4 24.5 218 4-316 29-262 (372)
320 2d81_A PHB depolymerase; alpha 99.4 1.1E-12 3.8E-17 131.9 12.7 145 597-743 6-178 (318)
321 3c5v_A PME-1, protein phosphat 99.4 1.4E-11 4.9E-16 126.2 21.2 197 513-741 38-301 (316)
322 3jrp_A Fusion protein of prote 99.4 2.7E-11 9.2E-16 127.4 23.3 227 32-371 13-275 (379)
323 3dw8_B Serine/threonine-protei 99.4 2.7E-11 9.2E-16 130.8 23.2 145 157-334 198-374 (447)
324 2hes_X YDR267CP; beta-propelle 99.4 1.2E-10 4.1E-15 120.2 26.5 180 32-317 16-218 (330)
325 4i19_A Epoxide hydrolase; stru 99.4 1.1E-11 3.7E-16 130.2 18.7 118 490-637 75-204 (388)
326 4ggc_A P55CDC, cell division c 99.4 2.3E-10 7.8E-15 117.1 28.4 283 33-462 28-316 (318)
327 3iz6_a 40S ribosomal protein R 99.4 1.3E-10 4.3E-15 122.6 26.8 236 157-465 88-333 (380)
328 3mmy_A MRNA export factor; mRN 99.4 8.8E-11 3E-15 122.8 25.1 272 32-447 41-336 (368)
329 3qyj_A ALR0039 protein; alpha/ 99.4 1.9E-11 6.7E-16 123.5 18.9 208 490-739 12-290 (291)
330 3k26_A Polycomb protein EED; W 99.4 2.4E-11 8.1E-16 127.1 20.2 263 6-371 45-354 (366)
331 2vdu_B TRNA (guanine-N(7)-)-me 99.4 9.8E-11 3.3E-15 126.6 25.5 195 32-331 104-337 (450)
332 3dm0_A Maltose-binding peripla 99.4 1E-10 3.4E-15 134.0 26.6 219 4-334 404-633 (694)
333 3lcr_A Tautomycetin biosynthet 99.4 1.2E-11 4.2E-16 126.4 16.9 202 513-743 81-305 (319)
334 1yfq_A Cell cycle arrest prote 99.4 1.7E-10 5.8E-15 119.4 25.8 245 4-373 32-313 (342)
335 1pgu_A Actin interacting prote 99.3 2.4E-10 8.1E-15 128.9 28.8 222 5-334 39-284 (615)
336 1qe3_A PNB esterase, para-nitr 99.3 8.8E-13 3E-17 142.2 7.4 211 494-722 82-316 (489)
337 3dwl_C Actin-related protein 2 99.3 2.2E-11 7.5E-16 128.2 18.0 217 4-317 32-270 (377)
338 3fle_A SE_1780 protein; struct 99.3 5.4E-11 1.9E-15 115.6 18.8 152 580-737 77-247 (249)
339 3ds8_A LIN2722 protein; unkonw 99.3 3.1E-11 1.1E-15 119.1 17.3 153 578-743 72-245 (254)
340 3f3f_A Nucleoporin SEH1; struc 99.3 2.5E-10 8.7E-15 118.1 25.1 205 32-333 13-249 (351)
341 2j04_B YDR362CP, TAU91; beta p 99.3 3E-10 1E-14 124.0 26.7 217 3-333 181-428 (524)
342 4ggc_A P55CDC, cell division c 99.3 4.9E-10 1.7E-14 114.6 26.8 255 5-372 45-304 (318)
343 2pm7_B Protein transport prote 99.3 3.8E-10 1.3E-14 114.4 25.6 228 32-371 11-273 (297)
344 1kez_A Erythronolide synthase; 99.3 1.5E-11 5.3E-16 124.8 15.1 201 512-743 66-284 (300)
345 2mad_H Methylamine dehydrogena 99.3 2.9E-09 9.9E-14 111.1 32.6 307 37-467 27-356 (373)
346 2oiz_A Aromatic amine dehydrog 99.3 1E-09 3.5E-14 114.4 29.2 280 6-408 32-338 (361)
347 4aow_A Guanine nucleotide-bind 99.3 7.9E-10 2.7E-14 114.2 27.2 272 4-406 60-339 (340)
348 3jrp_A Fusion protein of prote 99.3 2.7E-10 9.1E-15 119.7 23.8 227 157-461 33-287 (379)
349 1qks_A Cytochrome CD1 nitrite 99.3 3.7E-09 1.3E-13 116.1 33.5 325 6-466 178-543 (567)
350 2oaj_A Protein SNI1; WD40 repe 99.3 1.5E-09 5.1E-14 127.2 32.0 140 4-222 78-246 (902)
351 3bg1_A Protein SEC13 homolog; 99.3 1.6E-10 5.6E-15 118.3 20.7 227 32-371 15-281 (316)
352 2mad_H Methylamine dehydrogena 99.3 2.9E-09 9.8E-14 111.1 29.7 283 6-410 48-356 (373)
353 3odt_A Protein DOA1; ubiquitin 99.3 7E-10 2.4E-14 113.0 24.7 256 4-408 38-300 (313)
354 2hes_X YDR267CP; beta-propelle 99.3 3.4E-10 1.2E-14 116.7 22.0 253 5-371 34-316 (330)
355 3sjl_D Methylamine dehydrogena 99.3 1E-08 3.4E-13 105.5 31.6 308 36-466 38-368 (386)
356 3vu4_A KMHSV2; beta-propeller 99.2 7.5E-10 2.6E-14 115.4 23.4 242 32-334 21-272 (355)
357 2xyi_A Probable histone-bindin 99.2 7.2E-10 2.5E-14 118.9 23.9 198 32-333 130-353 (430)
358 3jro_A Fusion protein of prote 99.2 2.2E-10 7.4E-15 132.2 20.9 229 32-371 11-273 (753)
359 3v7d_B Cell division control p 99.2 3.5E-09 1.2E-13 114.8 29.4 284 37-466 127-426 (464)
360 2xyi_A Probable histone-bindin 99.2 3.6E-09 1.2E-13 113.4 28.3 213 175-461 182-410 (430)
361 2dg1_A DRP35, lactonase; beta 99.2 2.7E-09 9.3E-14 110.0 25.7 245 157-460 66-315 (333)
362 3lp5_A Putative cell surface h 99.2 1.5E-10 5.3E-15 112.4 15.1 146 579-739 77-233 (250)
363 3ils_A PKS, aflatoxin biosynth 99.2 1E-10 3.4E-15 116.4 14.1 199 512-737 20-264 (265)
364 3gre_A Serine/threonine-protei 99.2 1.5E-09 5.3E-14 116.6 24.4 197 32-334 65-293 (437)
365 2pm7_B Protein transport prote 99.2 4E-09 1.4E-13 106.8 25.5 232 157-466 31-291 (297)
366 3g02_A Epoxide hydrolase; alph 99.2 4.4E-10 1.5E-14 118.3 18.8 215 491-744 93-400 (408)
367 3f3f_A Nucleoporin SEH1; struc 99.2 3E-09 1E-13 109.9 25.0 164 157-371 33-237 (351)
368 3e5z_A Putative gluconolactona 99.2 7.1E-09 2.4E-13 104.9 26.8 231 157-466 50-291 (296)
369 4a11_B DNA excision repair pro 99.2 2.7E-09 9.2E-14 113.2 24.6 252 32-408 101-369 (408)
370 3dr2_A Exported gluconolactona 99.2 5.8E-09 2E-13 106.0 25.4 261 70-459 33-304 (305)
371 3e5z_A Putative gluconolactona 99.2 4.1E-09 1.4E-13 106.6 24.0 257 19-409 18-291 (296)
372 3v7d_B Cell division control p 99.2 1.8E-08 6E-13 109.2 30.4 258 4-409 141-426 (464)
373 1qks_A Cytochrome CD1 nitrite 99.2 2.1E-08 7.2E-13 110.1 30.4 338 34-501 157-523 (567)
374 2oiz_A Aromatic amine dehydrog 99.2 6E-09 2E-13 108.6 24.9 313 40-469 13-342 (361)
375 2j04_B YDR362CP, TAU91; beta p 99.1 1.2E-09 4.2E-14 119.3 19.9 235 30-371 133-416 (524)
376 3g4e_A Regucalcin; six bladed 99.1 4.7E-09 1.6E-13 106.3 23.0 224 157-449 35-264 (297)
377 3c75_H MADH, methylamine dehyd 99.1 2.1E-08 7.1E-13 105.1 28.1 310 39-466 81-407 (426)
378 3lrv_A PRE-mRNA-splicing facto 99.1 1.2E-08 4.2E-13 105.6 26.1 167 158-371 105-279 (343)
379 2oaj_A Protein SNI1; WD40 repe 99.1 1.9E-09 6.4E-14 126.3 21.9 204 32-334 19-243 (902)
380 3gre_A Serine/threonine-protei 99.1 1.7E-09 5.7E-14 116.4 19.8 249 33-412 30-300 (437)
381 2k2q_B Surfactin synthetase th 99.1 1.9E-10 6.4E-15 112.8 10.0 193 513-740 13-237 (242)
382 3dr2_A Exported gluconolactona 99.1 1E-08 3.5E-13 104.2 22.3 246 19-371 35-295 (305)
383 3jro_A Fusion protein of prote 99.1 4.5E-09 1.5E-13 121.2 20.6 230 157-461 31-285 (753)
384 3mmy_A MRNA export factor; mRN 99.1 3E-08 1E-12 103.3 25.0 249 5-372 64-335 (368)
385 3c75_H MADH, methylamine dehyd 99.0 1.5E-08 5.3E-13 106.1 22.2 276 5-410 99-408 (426)
386 4gq1_A NUP37; propeller, trans 99.0 4.7E-09 1.6E-13 111.0 17.7 113 36-221 95-221 (393)
387 3bg1_A Protein SEC13 homolog; 99.0 1.7E-08 5.9E-13 103.1 20.0 226 4-332 34-294 (316)
388 1tca_A Lipase; hydrolase(carbo 99.0 3E-09 1E-13 107.9 13.5 209 492-739 13-243 (317)
389 1ukc_A ESTA, esterase; fungi, 99.0 7.8E-10 2.7E-14 120.2 9.4 212 494-721 85-327 (522)
390 3lrv_A PRE-mRNA-splicing facto 99.0 4.1E-08 1.4E-12 101.6 22.0 184 32-317 127-321 (343)
391 2dg1_A DRP35, lactonase; beta 99.0 9.6E-08 3.3E-12 98.3 24.7 240 5-334 66-317 (333)
392 2ghs_A AGR_C_1268P; regucalcin 99.0 6.1E-08 2.1E-12 99.4 23.0 227 5-332 71-315 (326)
393 2ovr_B FBW7, F-BOX/WD repeat p 99.0 5.8E-07 2E-11 96.6 31.7 301 4-461 138-442 (445)
394 2ghs_A AGR_C_1268P; regucalcin 99.0 9.2E-08 3.2E-12 98.0 23.5 226 33-372 51-291 (326)
395 1npe_A Nidogen, entactin; glyc 98.9 1.4E-07 4.9E-12 93.6 23.9 239 42-410 1-244 (267)
396 2h7c_A Liver carboxylesterase 98.9 1.5E-09 5E-14 118.7 10.1 128 495-638 99-233 (542)
397 1ei9_A Palmitoyl protein thioe 98.9 4.1E-09 1.4E-13 104.9 11.7 87 546-637 26-116 (279)
398 1npe_A Nidogen, entactin; glyc 98.9 2.9E-07 9.9E-12 91.3 25.0 224 157-465 10-242 (267)
399 2ece_A 462AA long hypothetical 98.9 1.9E-06 6.7E-11 89.0 31.1 285 157-488 106-450 (462)
400 3g4e_A Regucalcin; six bladed 98.9 8.9E-08 3E-12 96.8 21.2 219 5-318 35-261 (297)
401 1gpl_A RP2 lipase; serine este 98.9 1.6E-09 5.5E-14 114.9 8.5 163 512-719 69-235 (432)
402 2ogt_A Thermostable carboxyles 98.9 3.2E-09 1.1E-13 114.7 10.8 128 495-638 85-224 (498)
403 3dsm_A Uncharacterized protein 98.9 2.3E-07 7.8E-12 95.2 24.1 229 157-463 64-303 (328)
404 2hfk_A Pikromycin, type I poly 98.9 3.6E-09 1.2E-13 108.2 10.4 175 553-743 115-314 (319)
405 3vu4_A KMHSV2; beta-propeller 98.9 2.1E-07 7E-12 96.8 23.2 195 176-463 60-273 (355)
406 2ha2_A ACHE, acetylcholinester 98.9 2.1E-09 7.1E-14 117.5 8.0 132 489-637 93-232 (543)
407 1mda_H Methylamine dehydrogena 98.9 1.8E-07 6E-12 96.5 21.0 280 63-466 47-351 (368)
408 1p0i_A Cholinesterase; serine 98.8 4.1E-09 1.4E-13 114.9 8.7 129 494-638 92-228 (529)
409 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1E-06 3.6E-11 94.6 27.3 268 37-466 124-396 (445)
410 4gq1_A NUP37; propeller, trans 98.8 1.3E-07 4.3E-12 99.9 19.6 221 4-317 110-378 (393)
411 1ea5_A ACHE, acetylcholinester 98.8 4.5E-09 1.5E-13 114.6 8.5 128 495-638 95-230 (537)
412 2fj0_A JuvenIle hormone estera 98.8 2.4E-09 8.1E-14 117.2 5.9 131 494-637 90-233 (551)
413 2cb9_A Fengycin synthetase; th 98.8 2.5E-08 8.5E-13 97.5 11.9 188 513-742 22-227 (244)
414 1ys1_X Lipase; CIS peptide Leu 98.8 3.6E-08 1.2E-12 99.9 13.2 105 513-637 8-114 (320)
415 3tej_A Enterobactin synthase c 98.8 1.4E-08 4.7E-13 104.2 9.9 194 513-737 101-327 (329)
416 1p22_A F-BOX/WD-repeat protein 98.8 5.6E-07 1.9E-11 96.4 22.9 214 36-371 137-353 (435)
417 1mda_H Methylamine dehydrogena 98.8 1.6E-07 5.4E-12 96.8 17.5 92 6-104 47-141 (368)
418 3v65_B Low-density lipoprotein 98.8 3.1E-06 1.1E-10 88.6 27.4 222 157-463 96-320 (386)
419 3dsm_A Uncharacterized protein 98.8 2.6E-06 8.8E-11 87.3 26.3 212 60-371 62-285 (328)
420 1jmk_C SRFTE, surfactin synthe 98.7 5.1E-08 1.7E-12 94.4 11.6 182 513-738 17-227 (230)
421 3v64_C Agrin; beta propeller, 98.7 6.3E-06 2.2E-10 84.9 28.0 222 157-463 53-277 (349)
422 2oit_A Nucleoporin 214KDA; NH2 98.7 1.7E-06 5.9E-11 92.2 24.1 118 175-333 150-278 (434)
423 3v65_B Low-density lipoprotein 98.7 2.1E-06 7E-11 90.0 24.2 180 61-334 95-278 (386)
424 1rwi_B Serine/threonine-protei 98.7 4.9E-06 1.7E-10 82.3 25.9 195 32-334 25-223 (270)
425 1bu8_A Protein (pancreatic lip 98.7 2E-08 7E-13 106.7 8.3 109 512-636 69-180 (452)
426 1thg_A Lipase; hydrolase(carbo 98.7 1.6E-08 5.3E-13 110.4 7.5 132 494-637 105-252 (544)
427 3sjl_D Methylamine dehydrogena 98.7 2.7E-06 9.2E-11 87.4 23.6 134 179-334 230-364 (386)
428 2ece_A 462AA long hypothetical 98.7 3.8E-06 1.3E-10 86.9 24.4 194 157-371 164-399 (462)
429 2w18_A PALB2, fancn, partner a 98.7 2.6E-06 8.8E-11 85.3 22.5 159 175-371 179-345 (356)
430 1fwx_A Nitrous oxide reductase 98.7 3.5E-07 1.2E-11 98.0 17.0 227 33-333 87-361 (595)
431 2bce_A Cholesterol esterase; h 98.7 2E-08 6.7E-13 110.0 7.7 135 495-636 81-222 (579)
432 3hrp_A Uncharacterized protein 98.7 6.4E-06 2.2E-10 87.0 26.4 201 32-334 132-355 (409)
433 1dx4_A ACHE, acetylcholinester 98.7 3.3E-08 1.1E-12 108.9 8.8 115 511-637 139-267 (585)
434 1llf_A Lipase 3; candida cylin 98.7 2.2E-08 7.4E-13 109.0 7.2 131 494-636 97-243 (534)
435 1w52_X Pancreatic lipase relat 98.7 3.3E-08 1.1E-12 105.1 8.3 109 512-636 69-180 (452)
436 3fvz_A Peptidyl-glycine alpha- 98.6 5.9E-06 2E-10 84.6 24.7 237 157-461 69-322 (329)
437 3v64_C Agrin; beta propeller, 98.6 5.7E-06 2E-10 85.2 24.5 180 61-334 52-235 (349)
438 3icv_A Lipase B, CALB; circula 98.6 2.4E-07 8.2E-12 92.1 12.9 119 494-638 49-170 (316)
439 1ex9_A Lactonizing lipase; alp 98.6 1.4E-07 4.9E-12 94.2 11.0 103 513-637 7-109 (285)
440 2z2n_A Virginiamycin B lyase; 98.6 4.5E-05 1.5E-09 76.4 29.8 192 31-331 15-211 (299)
441 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 9.8E-06 3.3E-10 82.2 25.0 236 157-461 46-299 (314)
442 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 8E-06 2.7E-10 82.8 24.2 239 5-334 46-300 (314)
443 1ijq_A LDL receptor, low-densi 98.6 2.4E-05 8.3E-10 79.4 27.5 224 157-463 10-240 (316)
444 3fvz_A Peptidyl-glycine alpha- 98.6 2.1E-06 7.2E-11 88.0 19.8 219 32-334 25-278 (329)
445 3sov_A LRP-6, low-density lipo 98.6 2.3E-05 7.8E-10 79.4 26.2 223 157-465 13-242 (318)
446 3bix_A Neuroligin-1, neuroligi 98.6 4.6E-08 1.6E-12 107.4 6.7 129 494-636 111-248 (574)
447 3p5b_L Low density lipoprotein 98.6 2.6E-05 8.8E-10 81.9 27.5 225 157-464 92-323 (400)
448 1ijq_A LDL receptor, low-densi 98.6 1.3E-05 4.4E-10 81.4 24.3 180 61-334 9-196 (316)
449 3p5b_L Low density lipoprotein 98.6 1.1E-05 3.6E-10 84.9 24.2 180 61-334 91-278 (400)
450 2oit_A Nucleoporin 214KDA; NH2 98.5 3.7E-06 1.3E-10 89.7 20.5 148 32-255 94-254 (434)
451 2x5x_A PHB depolymerase PHAZ7; 98.5 1.8E-07 6.3E-12 94.9 9.7 88 546-638 72-166 (342)
452 3n2z_B Lysosomal Pro-X carboxy 98.5 2.4E-07 8.1E-12 97.5 10.4 85 550-637 63-161 (446)
453 1q7f_A NHL, brain tumor CG1071 98.5 2.1E-05 7.2E-10 78.5 24.2 201 32-333 31-238 (286)
454 2w18_A PALB2, fancn, partner a 98.5 2.9E-05 9.9E-10 77.8 24.0 75 244-334 181-270 (356)
455 1hpl_A Lipase; hydrolase(carbo 98.5 2.6E-07 8.9E-12 97.5 9.5 109 512-636 68-179 (449)
456 3sov_A LRP-6, low-density lipo 98.5 1.7E-05 6E-10 80.2 22.6 180 61-334 12-198 (318)
457 3hrp_A Uncharacterized protein 98.5 1.9E-05 6.4E-10 83.4 23.5 229 6-331 153-408 (409)
458 1p22_A F-BOX/WD-repeat protein 98.5 2.1E-05 7.2E-10 84.0 23.9 207 4-333 152-365 (435)
459 1rp1_A Pancreatic lipase relat 98.4 2.7E-07 9.1E-12 97.5 8.1 107 513-636 70-179 (450)
460 1n7d_A LDL receptor, low-densi 98.4 4.4E-06 1.5E-10 94.4 18.3 180 61-334 385-572 (699)
461 4a0p_A LRP6, LRP-6, low-densit 98.4 4.5E-05 1.5E-09 84.8 25.5 182 61-334 14-198 (628)
462 1n7d_A LDL receptor, low-densi 98.4 5.1E-06 1.8E-10 93.8 18.1 227 157-466 386-619 (699)
463 3m0c_C LDL receptor, low-densi 98.4 3.1E-05 1E-09 88.0 24.3 180 61-334 403-590 (791)
464 1fwx_A Nitrous oxide reductase 98.4 2E-06 6.9E-11 92.2 13.4 222 5-283 112-359 (595)
465 1rwi_B Serine/threonine-protei 98.4 6.9E-05 2.3E-09 73.9 24.0 193 32-333 68-264 (270)
466 2zyr_A Lipase, putative; fatty 98.4 2.8E-07 9.5E-12 96.6 6.6 167 513-740 22-230 (484)
467 3m0c_C LDL receptor, low-densi 98.4 8.4E-05 2.9E-09 84.4 27.4 224 157-463 404-634 (791)
468 3s94_A LRP-6, low-density lipo 98.4 0.00078 2.7E-08 74.7 34.0 104 32-195 85-191 (619)
469 2qc5_A Streptogramin B lactona 98.4 0.00068 2.3E-08 67.7 30.9 193 32-333 21-218 (300)
470 3no2_A Uncharacterized protein 98.3 0.00015 5.1E-09 71.8 24.6 181 59-334 12-196 (276)
471 2dst_A Hypothetical protein TT 98.3 4.9E-06 1.7E-10 72.1 10.9 64 553-625 40-103 (131)
472 2qe8_A Uncharacterized protein 98.3 0.00026 8.9E-09 72.7 25.7 207 19-331 7-224 (343)
473 1q7f_A NHL, brain tumor CG1071 98.3 0.0002 6.7E-09 71.4 24.0 131 157-332 142-279 (286)
474 3tjm_A Fatty acid synthase; th 98.2 1.7E-06 5.7E-11 86.5 8.3 94 513-636 24-123 (283)
475 4a0p_A LRP6, LRP-6, low-densit 98.2 0.00054 1.9E-08 76.1 27.9 223 157-466 15-242 (628)
476 2p4o_A Hypothetical protein; p 98.2 0.00034 1.2E-08 70.5 24.1 247 19-372 20-277 (306)
477 2iwa_A Glutamine cyclotransfer 98.2 0.00011 3.9E-09 71.2 18.6 198 33-333 23-237 (266)
478 3s94_A LRP-6, low-density lipo 98.1 0.00039 1.3E-08 77.2 25.3 181 60-334 16-203 (619)
479 2iwa_A Glutamine cyclotransfer 98.1 0.00023 7.7E-09 69.1 19.7 166 157-371 44-224 (266)
480 2z2n_A Virginiamycin B lyase; 98.1 0.00085 2.9E-08 66.9 24.9 193 31-332 57-254 (299)
481 2qc5_A Streptogramin B lactona 98.1 0.0019 6.4E-08 64.4 27.0 193 32-333 63-260 (300)
482 3no2_A Uncharacterized protein 98.1 0.00054 1.9E-08 67.7 22.3 203 3-316 13-230 (276)
483 2p4o_A Hypothetical protein; p 98.0 0.00096 3.3E-08 67.1 23.8 209 157-447 53-278 (306)
484 2dsn_A Thermostable lipase; T1 97.9 4.2E-05 1.4E-09 78.7 11.5 37 601-637 103-164 (387)
485 3a9g_A Putative uncharacterize 97.9 0.0043 1.5E-07 63.6 26.5 154 157-331 49-229 (354)
486 2hih_A Lipase 46 kDa form; A1 97.9 3.6E-05 1.2E-09 80.4 10.7 36 602-637 151-212 (431)
487 3tc9_A Hypothetical hydrolase; 97.9 0.0015 5E-08 69.2 23.0 158 32-283 138-299 (430)
488 3nol_A Glutamine cyclotransfer 97.8 0.0019 6.6E-08 61.8 20.2 203 177-458 45-253 (262)
489 2fp8_A Strictosidine synthase; 97.8 0.0042 1.4E-07 62.9 23.3 148 158-333 102-269 (322)
490 2fp8_A Strictosidine synthase; 97.7 0.0034 1.2E-07 63.5 22.2 129 176-333 81-216 (322)
491 3nol_A Glutamine cyclotransfer 97.7 0.0013 4.6E-08 62.8 17.0 193 34-331 46-254 (262)
492 3qqz_A Putative uncharacterize 97.7 0.0097 3.3E-07 57.2 22.9 202 32-333 28-253 (255)
493 2qe8_A Uncharacterized protein 97.7 0.0021 7.1E-08 65.9 19.2 106 176-316 196-308 (343)
494 3qqz_A Putative uncharacterize 97.6 0.0088 3E-07 57.5 21.7 146 157-334 49-205 (255)
495 3das_A Putative oxidoreductase 97.6 0.013 4.5E-07 59.1 23.4 63 32-104 33-100 (347)
496 3das_A Putative oxidoreductase 97.6 0.046 1.6E-06 55.1 26.9 151 157-332 53-234 (347)
497 4hw6_A Hypothetical protein, I 97.5 0.01 3.5E-07 62.6 22.2 157 32-283 140-302 (433)
498 3sre_A PON1, serum paraoxonase 97.5 0.0032 1.1E-07 63.9 17.3 158 6-217 84-251 (355)
499 3nok_A Glutaminyl cyclase; bet 97.5 0.0064 2.2E-07 58.2 17.8 200 178-458 58-263 (268)
500 2ism_A Putative oxidoreductase 97.5 0.067 2.3E-06 54.6 27.2 141 157-317 51-220 (352)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=9.9e-55 Score=503.31 Aligned_cols=612 Identities=14% Similarity=0.064 Sum_probs=423.2
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCc--ee--ceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA--KI--NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~--~~--~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
..|+++++.. |+.+++....... .+ ..+.|||||++|||.+... .....+...++|++|+++|+.++|+..
T Consensus 36 ~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~-~~~r~~~~~~~~~~d~~~~~~~~l~~~ 110 (740)
T 4a5s_A 36 NNILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYV-KQWRHSYTASYDIYDLNKRQLITEERI 110 (740)
T ss_dssp TEEEEEETTT----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEE-ECSSSCEEEEEEEEETTTTEECCSSCC
T ss_pred CcEEEEECCC----CceEEEEechhhhhhcccccceEECCCCCEEEEEECCe-eeEEEccceEEEEEECCCCcEEEcccC
Confidence 4688888877 7766664222111 22 3389999999999987521 112234458899999999999999765
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
.. .+..++|||||+.|+|... ..||
T Consensus 111 ~~-----~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~ 135 (740)
T 4a5s_A 111 PN-----NTQWVTWSPVGHKLAYVWN--------------------------------------------------NDIY 135 (740)
T ss_dssp CT-----TEEEEEECSSTTCEEEEET--------------------------------------------------TEEE
T ss_pred CC-----cceeeEECCCCCEEEEEEC--------------------------------------------------CeEE
Confidence 54 3568899999999999832 5799
Q ss_pred EEcc-CCCccccCCccc---e-----------------eccccCCCCceEEEEecccCccc--ccc--------------
Q 004456 161 LGSL-DGTAKDFGTPAV---Y-----------------TAVEPSPDQKYVLITSMHRPYSY--KVP-------------- 203 (752)
Q Consensus 161 ~~~~-~G~~~~l~~~~~---~-----------------~~~~~SpDGk~l~~~~~~~~~~~--~~~-------------- 203 (752)
++++ +|+.++++..+. + ..+.|||||++|+|.+.+..... ..+
T Consensus 136 ~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (740)
T 4a5s_A 136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (740)
T ss_dssp EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCccee
Confidence 9999 567777765411 1 24889999999999876532100 000
Q ss_pred -----ccC--ccccEEEEecCC---c---eeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCcc
Q 004456 204 -----CAR--FSQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (752)
Q Consensus 204 -----~~~--~~~~l~~~d~~~---~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~ 270 (752)
.+. -...|++||+++ + ..+++.... .+......+..++|||||+. +++....
T Consensus 216 ~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~wspdg~~-~~~~~~r------- 280 (740)
T 4a5s_A 216 VPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA-------SMLIGDHYLCDVTWATQERI-SLQWLRR------- 280 (740)
T ss_dssp EECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH-------HHHTSCEEEEEEEEEETTEE-EEEEEES-------
T ss_pred ecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc-------cCCCCCeEEEEEEEeCCCeE-EEEEeCC-------
Confidence 000 012688999988 6 455554211 00011123567899999996 5544322
Q ss_pred ccCccceEEeccCCCCCCCC-------CeEEe-ec-ccc-----eeeeeeecCCceEE-EeeecccCceeEEEEcCCCCC
Q 004456 271 EVSPRDIIYTQPAEPAEGEK-------PEILH-KL-DLR-----FRSVSWCDDSLALV-NETWYKTSQTRTWLVCPGSKD 335 (752)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~-------~~~l~-~~-~~~-----~~~~~~spDg~~l~-~~~~~~~~~~~l~~~~~~~~~ 335 (752)
.+....|+++|+ ++++ ...+. .. ... ...++|||||+.|+ +.+ ...+..+||++++++
T Consensus 281 -~~~~~~i~~~d~---~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s-~~~G~~~l~~~~~~~-- 353 (740)
T 4a5s_A 281 -IQNYSVMDICDY---DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS-NEEGYRHICYFQIDK-- 353 (740)
T ss_dssp -STTEEEEEEEEE---ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE-CTTSCEEEEEEETTC--
T ss_pred -CCCEEEEEEEEC---CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE-cCCCceEEEEEECCC--
Confidence 122337889988 4444 33332 21 222 34789999999998 555 444678999999998
Q ss_pred ccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCcee-EEeecc
Q 004456 336 VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWESN 414 (752)
Q Consensus 336 ~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~~ 414 (752)
+..++++...... . -.+++||+.|+|.+... .......+||++++.++..+ .|+...
T Consensus 354 ~~~~~lT~g~~~v------~--~~~~~d~~~i~f~~~~~--------------~~~~~~~~ly~v~~~g~~~~~~lt~~~ 411 (740)
T 4a5s_A 354 KDCTFITKGTWEV------I--GIEALTSDYLYYISNEY--------------KGMPGGRNLYKIQLIDYTKVTCLSCEL 411 (740)
T ss_dssp SSCEESCCSSSCE------E--EEEEECSSEEEEEESCG--------------GGCTTCBEEEEEETTEEEEEEESSTTT
T ss_pred CceEecccCCEEE------E--EEEEEeCCEEEEEEecC--------------CCCCceeEEEEEECCCCCcceeecccc
Confidence 4667888654321 1 11346789999987320 00134668999999876654 454221
Q ss_pred chhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCC----CCCcCCCceEEEEEEcC
Q 004456 415 REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRK 490 (752)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~----~~~~~~~~~~~~~~~~~ 490 (752)
.. ...+...++||+|++++++..++.. ++.+++++..+++..+++..+.. .........+.+++ ..
T Consensus 412 ~~--------~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~ 481 (740)
T 4a5s_A 412 NP--------ERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-IL 481 (740)
T ss_dssp ST--------TTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EE
T ss_pred CC--------CCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-cc
Confidence 00 0012335689999999999998887 88899999988887777655432 12233345677778 67
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~ 569 (752)
+|..+++++++|+++++. +++|+||++||+++.... . ..+ ...+...++ ++||+|++++.++..+.
T Consensus 482 dg~~l~~~~~~P~~~~~~--~~~P~vv~~HGg~~~~~~-----~---~~~---~~~~~~~l~~~~G~~Vv~~D~rG~g~~ 548 (740)
T 4a5s_A 482 NETKFWYQMILPPHFDKS--KKYPLLLDVYAGPCSQKA-----D---TVF---RLNWATYLASTENIIVASFDGRGSGYQ 548 (740)
T ss_dssp TTEEEEEEEEECTTCCTT--SCEEEEEECCCCTTCCCC-----C---CCC---CCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred CCeEEEEEEEeCCCCCCC--CCccEEEEECCCCccccc-----c---ccc---CcCHHHHHHhcCCeEEEEEcCCCCCcC
Confidence 999999999999987654 359999999998643210 0 111 112345566 59999999666543333
Q ss_pred CCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCc
Q 004456 570 GDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF 646 (752)
Q Consensus 570 g~~~~---~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~ 646 (752)
|..+. ...+....++|+.+++++|.+++.+|++||+|+||||||++|+.++.++|++|+++|+++|+.++......+
T Consensus 549 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~ 628 (740)
T 4a5s_A 549 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVY 628 (740)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHH
T ss_pred ChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHH
Confidence 22111 112233468999999999998888999999999999999999999999999999999999988754322111
Q ss_pred ccc-cc--chhhhHHHHHhcChhhhcCCCCC-CEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc
Q 004456 647 QTE-FR--TLWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 722 (752)
Q Consensus 647 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 722 (752)
... .. ..+...+.+...+++..++++++ |+|++||+.|.+|| +.++++++++|+..+++++++++|+++|.+..
T Consensus 629 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~ 706 (740)
T 4a5s_A 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIAS 706 (740)
T ss_dssp HHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCS
T ss_pred HHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCC
Confidence 100 01 22556677888899888998886 99999999999999 99999999999999999999999999999865
Q ss_pred cccHHHHHHHHHHHHHHHhcCCC
Q 004456 723 RENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 723 ~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
.+....+.+.+.+||+++|+...
T Consensus 707 ~~~~~~~~~~i~~fl~~~l~~~~ 729 (740)
T 4a5s_A 707 STAHQHIYTHMSHFIKQCFSLPA 729 (740)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC-
T ss_pred CccHHHHHHHHHHHHHHHcCCCC
Confidence 66778899999999999997654
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.4e-51 Score=479.36 Aligned_cols=588 Identities=15% Similarity=0.182 Sum_probs=418.0
Q ss_pred eeEEeecCCCCCCCCceeecCCCCC-----------------------ceeceeEecCCCCeEEEeeccccccccccCcc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDG-----------------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKL 62 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~-----------------------~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~ 62 (752)
.|+++++.+ |+.+++...... ..+..++|||||++|+|++. .
T Consensus 65 ~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-----------~ 129 (741)
T 2ecf_A 65 DLWSYDIGS----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-----------G 129 (741)
T ss_dssp EEEEEETTT----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-----------T
T ss_pred EEEEEECCC----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-----------C
Confidence 699999988 887777643211 13688999999999999642 7
Q ss_pred eEEEEEcccC---cceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchh
Q 004456 63 RVWIADAETG---EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (752)
Q Consensus 63 ~l~v~~~~~g---~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (752)
+||+++++++ +.++++.... .+..+.|||||+.|+|.+.
T Consensus 130 ~i~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~SPDG~~la~~~~--------------------------------- 171 (741)
T 2ecf_A 130 ELYLYDLKQEGKAAVRQLTHGEG-----FATDAKLSPKGGFVSFIRG--------------------------------- 171 (741)
T ss_dssp EEEEEESSSCSTTSCCBCCCSSS-----CEEEEEECTTSSEEEEEET---------------------------------
T ss_pred cEEEEECCCCCcceEEEcccCCc-----ccccccCCCCCCEEEEEeC---------------------------------
Confidence 9999999999 8888876543 3568899999999999732
Q ss_pred hccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cc-----------------eeccccCCCCceEEEEecccCccc
Q 004456 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AV-----------------YTAVEPSPDQKYVLITSMHRPYSY 200 (752)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~-----------------~~~~~~SpDGk~l~~~~~~~~~~~ 200 (752)
.+|+++++ +|+.++++.. .. ...+.|||||++|++.+.+.....
T Consensus 172 -----------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 172 -----------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP 234 (741)
T ss_dssp -----------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC
T ss_pred -----------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc
Confidence 47999999 5566666654 21 478999999999999876532100
Q ss_pred c-----------------ccc-c--CccccEEEEecCC-ceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEE
Q 004456 201 K-----------------VPC-A--RFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (752)
Q Consensus 201 ~-----------------~~~-~--~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~ 259 (752)
. .+. + .....|++||+++ ++.+.+..... ....+..++| |||+. |++
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~-pDg~~-l~~ 302 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE----------QDIYLARVNW-RDPQH-LSF 302 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC----------SSEEEEEEEE-EETTE-EEE
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC----------cceEEEEEEe-CCCCE-EEE
Confidence 0 000 0 0112788999988 77666543310 1123567999 99998 777
Q ss_pred EEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc-----ceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
...... .....|+++|+ ++++...+..... .+..++|||||+ +++.+..+ +..+||.+++++
T Consensus 303 ~~~~~~-------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~-g~~~l~~~~~~~- 369 (741)
T 2ecf_A 303 QRQSRD-------QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT-GFQHLYRIDSKG- 369 (741)
T ss_dssp EEEETT-------SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT-SSCEEEEECSSS-
T ss_pred EEeccc-------CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC-CccEEEEEcCCC-
Confidence 653211 13447999998 5566665554332 345799999999 66655443 457899999876
Q ss_pred CccceeccccccccccCCCCCCce-eeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeec
Q 004456 335 DVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~p~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
. ...++.....- ..+ .|||||++|++..... + ....+||.++..++..+.|...
T Consensus 370 -~-~~~l~~~~~~v-------~~~~~~s~dg~~l~~~~~~~------------~----~~~~~l~~~~~~g~~~~~l~~~ 424 (741)
T 2ecf_A 370 -K-AAALTHGNWSV-------DELLAVDEKAGLAYFRAGIE------------S----ARESQIYAVPLQGGQPQRLSKA 424 (741)
T ss_dssp -C-EEESCCSSSCE-------EEEEEEETTTTEEEEEECSS------------C----TTCBEEEEEETTCCCCEECCCS
T ss_pred -C-eeeeeecceEE-------EeEeEEeCCCCEEEEEEeCC------------C----CceEEEEEEEcCCCCeeecccC
Confidence 3 45555432210 013 4999999998887321 1 1244678887766556666542
Q ss_pred cchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCC-----CCCCc--CCCceEEEE
Q 004456 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-----PYPTL--ASLQKEMIK 486 (752)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~-----~~~~~--~~~~~~~~~ 486 (752)
. .+ ..++|||||+.|++..++...|+++|+++..++..+.|+..+. ..... .....+.++
T Consensus 425 ~------~~-------~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (741)
T 2ecf_A 425 P------GM-------HSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGT 491 (741)
T ss_dssp C------SE-------EEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEE
T ss_pred C------Cc-------eEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEE
Confidence 1 11 2358999999999999999999999999987776666664332 11122 334789999
Q ss_pred EEcCCC-cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCc-hhHHHHHhCCcEEEecCCC
Q 004456 487 YQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGPSI 564 (752)
Q Consensus 487 ~~~~~g-~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~~ 564 (752)
++..+| ..+.++++.|+++.+. ++.|+||++||++..... ...|..... .++..|+++||+|+++++
T Consensus 492 ~~~~~g~~~l~~~~~~P~~~~~~--~~~p~vv~~hG~~~~~~~--------~~~~~~~~~~~~~~~l~~~G~~v~~~d~- 560 (741)
T 2ecf_A 492 LTAADGKTPLNYSVIKPAGFDPA--KRYPVAVYVYGGPASQTV--------TDSWPGRGDHLFNQYLAQQGYVVFSLDN- 560 (741)
T ss_dssp EECTTSSCEEEEEEECCSSCCTT--SCEEEEEECCCSTTCCSC--------SSCCCCSHHHHHHHHHHHTTCEEEEECC-
T ss_pred EEcCCCCEEEEEEEEeCCCCCCC--CCcCEEEEEcCCCCcccc--------cccccccchhHHHHHHHhCCCEEEEEec-
Confidence 999899 9999999999875433 358999999997632100 011211000 357788899999999555
Q ss_pred CCCCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 565 PIIGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 565 ~~~g~g~~~~~------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
+|.|.+... ..+....++|+.++++++.++..+|.+||+|+||||||++++.++.++|++|+++|+.+|+.+
T Consensus 561 --rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 638 (741)
T 2ecf_A 561 --RGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTD 638 (741)
T ss_dssp --TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred --CCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcc
Confidence 455443111 111234579999999999998888889999999999999999999999999999999999876
Q ss_pred CCCCccCccc-cccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004456 639 KTLTPFGFQT-EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 717 (752)
Q Consensus 639 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 717 (752)
+......+.. ....++...+.|...+|...+.++++|+|++||++|.++| +.++++++++++..+++++++++|+++
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 716 (741)
T 2ecf_A 639 WGLYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAK 716 (741)
T ss_dssp GGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCC
T ss_pred hhhhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCCC
Confidence 4321111100 1123445566777788988899999999999999999999 999999999999999999999999999
Q ss_pred ccCCccccHHHHHHHHHHHHHHHhc
Q 004456 718 HVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 718 H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
|.+.... ...+.+.+.+||+++|+
T Consensus 717 H~~~~~~-~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 717 HGLSGAD-ALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp SSCCHHH-HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCc-hhHHHHHHHHHHHHhcC
Confidence 9986433 37888999999999985
No 3
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.4e-50 Score=468.11 Aligned_cols=566 Identities=15% Similarity=0.142 Sum_probs=402.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+..++|||| ++|+|+. ...||++++++++.++++.... .+..+.|||||+.|+|+..
T Consensus 83 ~v~~~~~spd-~~~~~~~-----------~~~i~~~d~~~~~~~~l~~~~~-----~~~~~~~SpdG~~la~~~~----- 140 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT-----------QGGLVGFDMLARKVTYLFDTNE-----ETASLDFSPVGDRVAYVRN----- 140 (706)
T ss_dssp CCEEEEETTT-TEEEEEE-----------TTEEEEEETTTTEEEEEECCTT-----CCTTCEECTTSSEEEEEET-----
T ss_pred CceeEEECCC-CeEEEEE-----------CCEEEEEECCCCceEEccCCcc-----cccCCcCCCCCCEEEEEEC-----
Confidence 4788999999 8999953 2799999999999888876543 3567899999999999621
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-C-----CCccccCCc-cc--------
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D-----GTAKDFGTP-AV-------- 176 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~-----G~~~~l~~~-~~-------- 176 (752)
..|+++++ + |+.++++.. ..
T Consensus 141 ---------------------------------------------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 141 ---------------------------------------------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp ---------------------------------------------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred ---------------------------------------------CeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 57999999 6 776776654 22
Q ss_pred -------eeccccCCCCceEEEEecccCccccc-----------------c---ccCccccEEEEecCCceeEEecCCCC
Q 004456 177 -------YTAVEPSPDQKYVLITSMHRPYSYKV-----------------P---CARFSQKVQVWTTDGKLVRELCDLPP 229 (752)
Q Consensus 177 -------~~~~~~SpDGk~l~~~~~~~~~~~~~-----------------~---~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (752)
...+.|||||++|++.+.+....... + .......|++||+++++.+.+.....
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 37899999999999987432100000 0 00112579999999988766653211
Q ss_pred CCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCC-CCeEEeeccc-----ceee
Q 004456 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKLDL-----RFRS 303 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~~~~~-----~~~~ 303 (752)
....+..++|||||+. |++..... ......|+++|+ .++ ..+.+..... ....
T Consensus 256 ----------~~~~~~~~~~spdg~~-l~~~~~~~-------~~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 256 ----------KEKFLTNLSWSPDENI-LYVAEVNR-------AQNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp ----------TTCEEEEEEECTTSSE-EEEEEECT-------TSCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSC
T ss_pred ----------CceeEeeEEEECCCCE-EEEEEeCC-------CCCeeEEEEEEC---CCCceeeEEEEccCCCeECccCC
Confidence 1123567999999998 77765321 113347899998 455 4444442211 1256
Q ss_pred eeeec--CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEE
Q 004456 304 VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 381 (752)
Q Consensus 304 ~~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~ 381 (752)
++||| ||+.| +.+..+ +..+||.++.++ .....++.....- ...++|||||+.|++.....
T Consensus 315 ~~~sp~~dg~~l-~~~~~~-g~~~l~~~~~~~--~~~~~l~~~~~~v------~~~~~~spdg~~l~~~~~~~------- 377 (706)
T 2z3z_A 315 LTFLPGSNNQFI-WQSRRD-GWNHLYLYDTTG--RLIRQVTKGEWEV------TNFAGFDPKGTRLYFESTEA------- 377 (706)
T ss_dssp CEECTTCSSEEE-EEECTT-SSCEEEEEETTS--CEEEECCCSSSCE------EEEEEECTTSSEEEEEESSS-------
T ss_pred ceeecCCCCEEE-EEEccC-CccEEEEEECCC--CEEEecCCCCeEE------EeeeEEcCCCCEEEEEecCC-------
Confidence 79999 99855 444333 457899999765 3445555432111 01146999999999987331
Q ss_pred EEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 382 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 382 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
.....+||.+|+.+++.+.|.... .+ ..++|||||+.+++..++...|++|+++|+.+
T Consensus 378 ---------~~~~~~l~~~d~~~~~~~~l~~~~------~~-------~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 378 ---------SPLERHFYCIDIKGGKTKDLTPES------GM-------HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp ---------CTTCBEEEEEETTCCCCEESCCSS------SE-------EEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred ---------CCceEEEEEEEcCCCCceeccCCC------ce-------EEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 112357999999988877765321 11 23589999999999998888899999999988
Q ss_pred CCeeEeecCCCCCCCcCCCceEEEEEEcCCC-cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCcc
Q 004456 462 KKSSQITNFPHPYPTLASLQKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF 540 (752)
Q Consensus 462 g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~ 540 (752)
++...++..+ ..........+.+.+...+| ..+.+++++|+++++.+ ++|+||++||++..... ...|
T Consensus 436 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--~~p~iv~~HGg~~~~~~--------~~~~ 504 (706)
T 2z3z_A 436 GSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPHAQLV--------TKTW 504 (706)
T ss_dssp CEEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTS--CEEEEEECCCCTTCCCC--------CSCC
T ss_pred CeEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CccEEEEecCCCCceee--------cccc
Confidence 8755555432 33344455788999999899 89999999998765433 48999999997643210 0112
Q ss_pred CCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCC------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 004456 541 SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF 614 (752)
Q Consensus 541 ~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~------~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 614 (752)
......++..|+++||.|++++.+ |.|.+.. ...+....++|+.+++++|.+++.+|.+|++|+||||||+
T Consensus 505 ~~~~~~~~~~la~~G~~v~~~d~r---G~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 581 (706)
T 2z3z_A 505 RSSVGGWDIYMAQKGYAVFTVDSR---GSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGF 581 (706)
T ss_dssp ----CCHHHHHHHTTCEEEEECCT---TCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred ccCchHHHHHHHhCCcEEEEEecC---CCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHH
Confidence 211112577888999999995554 4444311 1123345679999999999988888889999999999999
Q ss_pred HHHHHHHhCCCceeEEEEccCCCCCCCCccCccc-cccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHH
Q 004456 615 MTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT-EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ 693 (752)
Q Consensus 615 ~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~ 693 (752)
+|+.++.++|++|+++|+.+|+.++......+.. ....++...+.+...++...+.++++|+|++||++|.+|| +.+
T Consensus 582 ~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~ 659 (706)
T 2z3z_A 582 MTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQH 659 (706)
T ss_dssp HHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THH
T ss_pred HHHHHHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCC--HHH
Confidence 9999999999999999999998764322111100 0123344566777788888899999999999999999999 999
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 694 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
+++++++++..+++++++++|+++|.+... ....+.+.+.+||+++|
T Consensus 660 ~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 660 SLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 999999999988899999999999998744 67889999999999886
No 4
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=5.7e-50 Score=459.38 Aligned_cols=576 Identities=16% Similarity=0.151 Sum_probs=410.7
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccc--cc--cceEEe--cCCcE-EEEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNA--VF--GSFVWV--NNSTL-LIFT 104 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~--~~--~~~~ws--pdg~~-l~~~ 104 (752)
.+..|+|||| +++|++.+. ..++...||++ ..+++.++||......... .. ..+.|+ |||+. |+|+
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRP----AEAGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp CCEEEEEETT--EEEEEEEET----TTTTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred ccceeEEcCC--eEEEEecCc----ccCCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 5888999965 788876421 12345788988 5788899998765321000 00 155677 99999 9987
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccC----CCccccCC-----c-
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGT-----P- 174 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~----G~~~~l~~-----~- 174 (752)
... ..+||+++++ |+.++++. .
T Consensus 98 ~~~------------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HFG------------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BTT------------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred ECC------------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 421 1579999997 77778876 3
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC------ceeEEec-CCCCCCCCCcccCCccccccce
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMRSI 247 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 247 (752)
.....++|||||++|++.+.+.... . ...-..+|++|++++ ++.+.++ ..... ...+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE--G-PSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRF-------------VTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS--S-TTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSE-------------ECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCC--C-CCCceeEEEEEECCCCccccCCceeEEEecCCCc-------------ccCc
Confidence 5677999999999999987652100 0 001125899999998 7777776 43221 4568
Q ss_pred eeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC-CC---CCeEEeec-ccceeeeeeecCCceEEEeeecccC
Q 004456 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYKTS 322 (752)
Q Consensus 248 ~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~---~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~ 322 (752)
+|||||++ |+|.+...... ......|+++++ + ++ ..+.++.. ...+..++|||||+ ++|.+..+ +
T Consensus 194 ~~SpDG~~-la~~~~~~~~~----~~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~-~ 263 (662)
T 3azo_A 194 RLSPDGRQ-AVWLAWDHPRM----PWEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT-G 263 (662)
T ss_dssp EECTTSSE-EEEEEECTTCC----TTTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT-S
T ss_pred eECCCCCE-EEEEECCCCCC----CCCCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC-C
Confidence 99999998 88886432111 112357999998 4 34 45566654 56788999999999 77877544 4
Q ss_pred ceeEEEEcCCCCCccceeccccccccccCCCCCC-------ceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCC
Q 004456 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-------MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (752)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p-------~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (752)
..+||+++++++ +.+.++...... ..| .++|++||+.++... + ...
T Consensus 264 ~~~l~~~~~~~~--~~~~l~~~~~~~-----~~p~w~~~~~~~~~~~~~~~~~~~~-------------------~-~~~ 316 (662)
T 3azo_A 264 WWNLHRVDPATG--AATQLCRREEEF-----AGPLWTPGMRWFAPLANGLIAVVHG-------------------K-GAA 316 (662)
T ss_dssp SCEEEEECTTTC--CEEESSCCSSBS-----SCCCCSTTCCSEEECTTSCEEEEEB-------------------S-SSC
T ss_pred CeEEEEEECCCC--ceeecccccccc-----cCccccccCceEeEeCCCEEEEEEE-------------------c-Ccc
Confidence 558999998763 445555433221 122 233445555333322 1 234
Q ss_pred eeEEEecCCCceeEEeeccchhhhhceeeeecCCcceec-ccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCC
Q 004456 396 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY 474 (752)
Q Consensus 396 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~ 474 (752)
+|+++|+++++.+.|...... + .++ ++|++.++|+..+...+.+||++|+.+++.++|+..+...
T Consensus 317 ~l~~~d~~~~~~~~l~~~~~~--------~------~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~ 382 (662)
T 3azo_A 317 VLGILDPESGELVDAAGPWTE--------W------AATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDP 382 (662)
T ss_dssp EEEEEETTTTEEEECCSSCCE--------E------EEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCS
T ss_pred EEEEEECCCCcEEEecCCCCe--------E------EEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCccc
Confidence 799999988887777543211 1 133 7889999999999888999999999999999998765432
Q ss_pred -CCcCCCceEEEEEEcCCCcEEEEEEEeCCCCC--CCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH
Q 004456 475 -PTLASLQKEMIKYQRKDGVPLTATLYLPPGYD--QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF 551 (752)
Q Consensus 475 -~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~--~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 551 (752)
........+.+.+...+|..+++++++|++.+ ....++.|+||++||++.... ...+...+..|
T Consensus 383 ~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l 449 (662)
T 3azo_A 383 VDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRV-------------PAVLDLDVAYF 449 (662)
T ss_dssp SCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCC-------------CCSCCHHHHHH
T ss_pred CCccccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccC-------------cccchHHHHHH
Confidence 22233468899999889999999999998753 001235899999999863211 11122467788
Q ss_pred HhCCcEEEecCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004456 552 LARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 628 (752)
Q Consensus 552 ~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~ 628 (752)
+++||+|+++++++..|+|.+.. ...+....++|+.++++++.++..+|.+||+|+||||||++++.++.+ |++|+
T Consensus 450 ~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~ 528 (662)
T 3azo_A 450 TSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYA 528 (662)
T ss_dssp HTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCS
T ss_pred HhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceE
Confidence 99999999988777666765522 122234558999999999999988999999999999999999998887 89999
Q ss_pred EEEEccCCCCCCCC------ccC--cc-ccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHH
Q 004456 629 CGIARSGSYNKTLT------PFG--FQ-TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 699 (752)
Q Consensus 629 ~~v~~~~~~~~~~~------~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 699 (752)
++|+.+|+.+.... .+. +. .......+..+.+...+|+..+.++++|+|++||++|.+|| +.+++++++
T Consensus 529 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~ 606 (662)
T 3azo_A 529 CGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFLE 606 (662)
T ss_dssp EEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHH
T ss_pred EEEecCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHHH
Confidence 99999998763210 000 00 00111124566777889999999999999999999999999 999999999
Q ss_pred HHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 700 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 700 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+|+..+.+++++++++++|.+...+....+.+.+.+||.++|+...
T Consensus 607 ~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 607 AVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVEV 652 (662)
T ss_dssp HHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999986566678899999999999997654
No 5
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=1.5e-51 Score=477.73 Aligned_cols=613 Identities=13% Similarity=0.050 Sum_probs=404.9
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCc--eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
..|+++++.+ |+.+++....... .+..++|||||++|||.+.... ....+....||++++++++.++++....
T Consensus 37 g~i~~~d~~~----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 37 GTVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-IYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp SCEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-CSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CCEEEEECCC----CcEEEEeccccccccccceEEECCCCCEEEEEecCcc-ceeecceeeEEEEECCCCceEeccCCcc
Confidence 4688888877 7776665322211 3788999999999999865210 1112345899999999999888875443
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
.. ..+..++|||||+.|+|.+. .+||++
T Consensus 112 ~~--~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~ 139 (723)
T 1xfd_A 112 SN--AKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYC 139 (723)
T ss_dssp CS--CCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEE
T ss_pred cc--ccccccEECCCCCEEEEEEC--------------------------------------------------CeEEEE
Confidence 21 12567899999999999842 479999
Q ss_pred cc-CCCccccCCc--cce------------------eccccCCCCceEEEEecccCcccc--cc----------------
Q 004456 163 SL-DGTAKDFGTP--AVY------------------TAVEPSPDQKYVLITSMHRPYSYK--VP---------------- 203 (752)
Q Consensus 163 ~~-~G~~~~l~~~--~~~------------------~~~~~SpDGk~l~~~~~~~~~~~~--~~---------------- 203 (752)
++ +|+.++++.. ..+ ..++|||||++|+|.+.+...... ..
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 99 5566666543 222 579999999999998765311000 00
Q ss_pred -cc--CccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEE
Q 004456 204 -CA--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIY 279 (752)
Q Consensus 204 -~~--~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~ 279 (752)
.+ .....|++||+.+++. +.+..... +......+..++|||||+. |++.... ......|+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~SpDg~~-l~~~~~~--------~~~~~~i~ 283 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDD-------PRMREYYITMVKWATSTKV-AVTWLNR--------AQNVSILT 283 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCC-------GGGSSEEEEEEEESSSSEE-EEEEEET--------TSCEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCcc-------CCCccceeEEEEEeCCCeE-EEEEEcC--------CCCeEEEE
Confidence 00 0113789999988763 45443210 0011123567999999996 5544322 11334789
Q ss_pred eccCCCCCCCCCeEEeecc--cce----eeeeeecCCceEEEeeecccC----ceeEEEEc-CCCCCcc---ceeccccc
Q 004456 280 TQPAEPAEGEKPEILHKLD--LRF----RSVSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRV 345 (752)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~--~~~----~~~~~spDg~~l~~~~~~~~~----~~~l~~~~-~~~~~~~---~~~l~~~~ 345 (752)
++|+ ++++...+.... ..+ ..++|||||+.|++.+....+ ..+||+++ ..+ +. .+.++...
T Consensus 284 ~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 284 LCDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITSGD 358 (723)
T ss_dssp EEET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCCSS
T ss_pred EEeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC--CCccceeEeecCC
Confidence 9998 555655554321 222 378999999999997322223 56899999 455 33 45555322
Q ss_pred cccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCC-ceeEEeeccchhhhhceee
Q 004456 346 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAVA 424 (752)
Q Consensus 346 ~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~~ 424 (752)
... ...++|||||++|++...+. .....+||.+++.++ +.+.|+.....
T Consensus 359 ~~~------~~~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~~-------- 408 (723)
T 1xfd_A 359 WDV------TKILAYDEKGNKIYFLSTED----------------LPRRRQLYSANTVGNFNRQCLSCDLVE-------- 408 (723)
T ss_dssp SCE------EEEEEEETTTTEEEEEESSS----------------CTTCCEEEEECSSTTCCCBCSSTTSSS--------
T ss_pred eEE------EeeeEEcCCCCEEEEEEcCC----------------CCcceEEEEEeCCCCCCcceecccccC--------
Confidence 111 11146999999999887321 013446888887654 34444321000
Q ss_pred eecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCC----CCCcCCCceEEEEEEcCCCcEEEEEEE
Q 004456 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVPLTATLY 500 (752)
Q Consensus 425 ~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~l~ 500 (752)
......++|||||+++++..++...|..++ ++..+++...+...+.. .........+.+.+++.+| .+.++++
T Consensus 409 -~~~~~~~~~spdg~~l~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~ 485 (723)
T 1xfd_A 409 -NCTYFSASFSHSMDFFLLKCEGPGVPMVTV-HNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQIL 485 (723)
T ss_dssp -SCCCCEEEECTTSSEEEEECCSSSSCCEEE-EETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEE
T ss_pred -CCCeEEEEECCCCCEEEEEccCCCCCeEEE-EECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEE
Confidence 011234689999999999998888887655 46655554333222211 1122334678888888888 9999999
Q ss_pred eCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCC---CCCch
Q 004456 501 LPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDR 577 (752)
Q Consensus 501 ~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~---~~~~~ 577 (752)
+|+++++. +++|+||++||+++.... ...|. .......|+++||+|+++++++..++|.. .....
T Consensus 486 ~P~~~~~~--~~~p~vv~~HG~~~~~~~--------~~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~ 553 (723)
T 1xfd_A 486 KPATFTDT--THYPLLLVVDGTPGSQSV--------AEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR 553 (723)
T ss_dssp BCSSCCSS--SCEEEEEECCCCTTCCCC--------CCCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC
T ss_pred eCCCCCCC--CccCEEEEEcCCCCcccc--------Ccccc--ccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhc
Confidence 99886543 358999999998643100 01111 11234456679999999665433332211 01112
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEccCCCCCCCCccCccc-cccc
Q 004456 578 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLTPFGFQT-EFRT 652 (752)
Q Consensus 578 ~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----p~~~~~~v~~~~~~~~~~~~~~~~~-~~~~ 652 (752)
+....++|+.++++++.++..+|.+||+|+||||||++++.++.++ |++|+++|+++|+.++......+.. ....
T Consensus 554 ~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 633 (723)
T 1xfd_A 554 LGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGL 633 (723)
T ss_dssp TTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCC
T ss_pred cCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCC
Confidence 2235678999999999988778889999999999999999999999 9999999999998775432110000 0011
Q ss_pred hhhhHHHHHhcChhhhcCCCC-CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHH
Q 004456 653 LWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 731 (752)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 731 (752)
++.....+...++...+.+++ +|+|++||++|.+|| +.++++++++|+..+.+++++++|+++|.+...+....+.+
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 711 (723)
T 1xfd_A 634 HGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYR 711 (723)
T ss_dssp CSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHH
T ss_pred ccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHH
Confidence 111112333456667788898 799999999999999 99999999999999999999999999999855666788999
Q ss_pred HHHHHHHHHhc
Q 004456 732 ETDRWLQKYCL 742 (752)
Q Consensus 732 ~~~~fl~~~l~ 742 (752)
.+.+||+++|+
T Consensus 712 ~i~~fl~~~l~ 722 (723)
T 1xfd_A 712 SIINFFVECFR 722 (723)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 6
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2.1e-50 Score=455.21 Aligned_cols=544 Identities=15% Similarity=0.106 Sum_probs=391.2
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++|||++.. ++..+||++ ++|+.+++|..... .+..+.|||| + |+|++....+.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~----~~~~~~~spd-~-~l~~~~~~~g~ 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPIN----SVLDPHYGVG-R-VILVRDVSKGA 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCS----EECEECTTCS-E-EEEEEECSTTS
T ss_pred chheeecCCCCCeEEEEEcc-------CCceeEEEE--cCCCcEeeeccccc----ccccccCCCC-e-EEEEeccCCCC
Confidence 37788999999999997642 445677775 69999999876531 3567899999 5 66654321111
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc--CCCccccCCccceeccccCCCCceE
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYV 189 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~--~G~~~~l~~~~~~~~~~~SpDGk~l 189 (752)
....||.+++ +|...+++........+|||||+.+
T Consensus 88 -------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 88 -------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAV 124 (582)
T ss_dssp -------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCE
T ss_pred -------------------------------------------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeE
Confidence 1157999999 7766677666445577999999999
Q ss_pred EEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCc
Q 004456 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (752)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~ 269 (752)
+|.+... ..+.+||+++++.++++..+. ..++|||||+. |++.+...+
T Consensus 125 ~~~s~~~------------~~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~-la~~~~~~~---- 172 (582)
T 3o4h_A 125 VFTGATE------------DRVALYALDGGGLRELARLPG---------------FGFVSDIRGDL-IAGLGFFGG---- 172 (582)
T ss_dssp EEEEECS------------SCEEEEEEETTEEEEEEEESS---------------CEEEEEEETTE-EEEEEEEET----
T ss_pred EEEecCC------------CCceEEEccCCcEEEeecCCC---------------ceEEECCCCCE-EEEEEEcCC----
Confidence 8876654 245688999988888775432 37899999998 777754321
Q ss_pred cccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccc
Q 004456 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 349 (752)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 349 (752)
....|+++|+ ++++.+.|+.....+..++|||||+.|+ .+ ...+...||+++++++ +.+.+..... ..
T Consensus 173 ----~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~-~~~~~~~i~~~d~~~~--~~~~~~~~~~-~~ 240 (582)
T 3o4h_A 173 ----GRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GL-ETAREARLVTVDPRDG--SVEDLELPSK-DF 240 (582)
T ss_dssp ----TEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EE-ECSSCEEEEEECTTTC--CEEECCCSCS-HH
T ss_pred ----CCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE-Ec-cCCCeeEEEEEcCCCC--cEEEccCCCc-Ch
Confidence 1236999998 6778888887778889999999999998 33 2224468999999985 3343322211 11
Q ss_pred cC--CCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeec
Q 004456 350 YS--DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (752)
Q Consensus 350 ~~--~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (752)
.. .......+||||| .+++..... | .+.+|++ |+..+.. . . .+.
T Consensus 241 ~~~~~~~~~~~~~spdg-~~~~~~~~~------------g--------~~~l~~~--g~~~~~~--~-~----~v~---- 286 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDG-RLAVVARRE------------G--------RSAVFID--GERVEAP--Q-G----NHG---- 286 (582)
T ss_dssp HHHCCSEEEEEEECTTS-CEEEEEEET------------T--------EEEEEET--TEEECCC--S-S----EEE----
T ss_pred hhhhhccccceeEcCCC-cEEEEEEcC------------C--------cEEEEEE--CCeeccC--C-C----ceE----
Confidence 00 0000112299999 666665331 1 3556666 5543311 0 1 111
Q ss_pred CCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCCCC---cCCCceEEEEEEcCCCcEEEEEEEeCCC
Q 004456 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPT---LASLQKEMIKYQRKDGVPLTATLYLPPG 504 (752)
Q Consensus 428 ~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~~P~~ 504 (752)
.++|| ||+. +++.++...|+++|+++..+ +.++| .... ......+.+++++.+|..++++++.|++
T Consensus 287 ---~~~~s-dg~~-l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~ 355 (582)
T 3o4h_A 287 ---RVVLW-RGKL-VTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGR 355 (582)
T ss_dssp ---EEEEE-TTEE-EEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHTEEEEEEEEEECTTSCEEEEEEEEETT
T ss_pred ---EEEec-CCEE-EEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccccCcceEEEEECCCCCEEEEEEEcCCC
Confidence 34788 6654 47777788899999999765 55544 1122 3445789999999999999999999987
Q ss_pred CCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC---CCchhHHH
Q 004456 505 YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQ 581 (752)
Q Consensus 505 ~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~ 581 (752)
..+ +.|+||++||+++... ...+...+..|+++||+|+++++++..++|.+. ....+...
T Consensus 356 ~~~----~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~ 418 (582)
T 3o4h_A 356 APT----PGPTVVLVHGGPFAED-------------SDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGG 418 (582)
T ss_dssp SCS----SEEEEEEECSSSSCCC-------------CSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTH
T ss_pred CCC----CCcEEEEECCCccccc-------------ccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccc
Confidence 432 5899999999864321 111235678899999999998877666676542 12233446
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc-----ccchhhh
Q 004456 582 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE-----FRTLWEA 656 (752)
Q Consensus 582 ~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~ 656 (752)
.++|+.++++++.++..+| +|+|+||||||++|+.++.++|++|+++|+++|+.++.......... ....-..
T Consensus 419 ~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
T 3o4h_A 419 ELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGS 496 (582)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTTTC
T ss_pred cHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHHHcCcC
Confidence 6899999999999997777 99999999999999999999999999999999977632100000000 0000135
Q ss_pred HHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHH
Q 004456 657 TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 736 (752)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 736 (752)
.+.+...+|+.++.++++|+|++||++|.+|| +.++++++++++..+.+++++++|+++|.+...+....+.+.+.+|
T Consensus 497 ~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 574 (582)
T 3o4h_A 497 REIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFF 574 (582)
T ss_dssp HHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999 9999999999999999999999999999987666778899999999
Q ss_pred HHHHhcC
Q 004456 737 LQKYCLS 743 (752)
Q Consensus 737 l~~~l~~ 743 (752)
|+++|++
T Consensus 575 l~~~l~~ 581 (582)
T 3o4h_A 575 LATQRER 581 (582)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9999975
No 7
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-50 Score=465.02 Aligned_cols=604 Identities=13% Similarity=0.078 Sum_probs=409.2
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCC--ceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc---eecc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLF 78 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~---~~lt 78 (752)
...|+++++.+ |+.++++..... ..+..++|||||++|||.+...+ .-..+....||++++++|+. ++++
T Consensus 35 d~~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~-~~~~s~~~~i~~~d~~~g~~~~~~~l~ 109 (719)
T 1z68_A 35 DNNIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSK-LWRYSYTATYYIYDLSNGEFVRGNELP 109 (719)
T ss_dssp TSCEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEE-CSSSCEEEEEEEEETTTTEECCSSCCC
T ss_pred CCCEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCce-eEEeecceEEEEEECCCCccccceecC
Confidence 35788999988 888888632111 02788999999999999864210 00012247899999999988 6663
Q ss_pred CCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
. .+..+.|||||+.|+|... ..
T Consensus 110 ---~-----~~~~~~~SPDG~~la~~~~--------------------------------------------------~~ 131 (719)
T 1z68_A 110 ---R-----PIQYLCWSPVGSKLAYVYQ--------------------------------------------------NN 131 (719)
T ss_dssp ---S-----SBCCEEECSSTTCEEEEET--------------------------------------------------TE
T ss_pred ---c-----ccccceECCCCCEEEEEEC--------------------------------------------------Ce
Confidence 2 3567899999999999732 57
Q ss_pred EEEEcc-CCCccccCCcc--c------------------eeccccCCCCceEEEEecccCcccc----------------
Q 004456 159 LVLGSL-DGTAKDFGTPA--V------------------YTAVEPSPDQKYVLITSMHRPYSYK---------------- 201 (752)
Q Consensus 159 i~~~~~-~G~~~~l~~~~--~------------------~~~~~~SpDGk~l~~~~~~~~~~~~---------------- 201 (752)
|+++++ +|+.++++..+ . ...++|||||++|+|.+.+......
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 999999 66766766431 1 1489999999999998765311000
Q ss_pred c--c-cc--CccccEEEEecCCceeE---EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccC
Q 004456 202 V--P-CA--RFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (752)
Q Consensus 202 ~--~-~~--~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~ 273 (752)
. + .+ .....|++||+++++.. .+... ..+......+..++|||||+ +++..... ..
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~SpD~~--~~~~~~~~-------~~ 275 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP-------AMIASSDYYFSWLTWVTDER--VCLQWLKR-------VQ 275 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC-------HHHHTSCEEEEEEEESSSSE--EEEEEEES-------ST
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCC-------ccCCCCcceEEEeEEeCCCe--EEEEEecc-------cc
Confidence 0 0 00 01137889999887642 32211 01111222356799999976 44443211 11
Q ss_pred ccceEEecc----CCCCCCCCCeEEee-----ccccee-----eeeeecCCceEEEeeecccCceeEEEEcCCCCCccce
Q 004456 274 PRDIIYTQP----AEPAEGEKPEILHK-----LDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (752)
Q Consensus 274 ~~~~l~~~~----~~~~~~~~~~~l~~-----~~~~~~-----~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (752)
....|+++| + .+++.+.+.. ....+. .++|||||+.|++......+..+||++++.++ +.+
T Consensus 276 ~~~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~ 350 (719)
T 1z68_A 276 NVSVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAI 350 (719)
T ss_dssp TEEEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCE
T ss_pred CeEEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceE
Confidence 234788888 6 4444444431 223333 78999999999886544446778999999874 456
Q ss_pred eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc--eeEEeeccchh
Q 004456 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNREK 417 (752)
Q Consensus 340 ~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~ 417 (752)
.++.....- .. +.++ ||+.|+|.+... .......+||.+++.+|. .+.|+..-..
T Consensus 351 ~lt~~~~~v-----~~--~~~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~- 407 (719)
T 1z68_A 351 QITSGKWEA-----IN--IFRV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRK- 407 (719)
T ss_dssp ECSCSSSCE-----EE--EEEE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTT-
T ss_pred ecccCceEE-----EE--EEEE-eCCEEEEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCccCC-
Confidence 666433211 01 2345 999999987320 001234578999886663 4555421100
Q ss_pred hhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCC----CCCcCCCceEEEEEEcCCCc
Q 004456 418 YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGV 493 (752)
Q Consensus 418 ~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~----~~~~~~~~~~~~~~~~~~g~ 493 (752)
.......++||+|++++++..++...| .++++|+.+++..+++..+.. .........+.++++..+ .
T Consensus 408 -------~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 478 (719)
T 1z68_A 408 -------ERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-I 478 (719)
T ss_dssp -------TTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-E
T ss_pred -------CCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-e
Confidence 001122358999999999988877766 688999988887777765432 223334468899999877 8
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCCCCCCCCCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDK 572 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~ 572 (752)
.+++++++|+++++. +++|+||++||++..... ...+ ...+...++ ++||+|++++++ |.|.+
T Consensus 479 ~l~~~~~~P~~~~~~--~~~p~vl~~hG~~~~~~~--------~~~~---~~~~~~~l~~~~G~~v~~~d~r---G~g~~ 542 (719)
T 1z68_A 479 TLWYKMILPPQFDRS--KKYPLLIQVYGGPCSQSV--------RSVF---AVNWISYLASKEGMVIALVDGR---GTAFQ 542 (719)
T ss_dssp EEEEEEEECTTCCSS--SCEEEEEEECCCTTBCCC--------CCCC---CCCHHHHHHHTTCCEEEEEECT---TBSSS
T ss_pred EEEEEEEeCCCCCCC--CCccEEEEECCCCCcCcc--------cccc---hhhHHHHHHhcCCeEEEEEcCC---CCCCC
Confidence 999999999876443 358999999998643210 0111 112345554 799999996654 44433
Q ss_pred CCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCc
Q 004456 573 LPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF 646 (752)
Q Consensus 573 ~~~------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~ 646 (752)
... ..+....++|+.++++++.++..+|.+||+|+||||||++|+.++.++|++|+++|+++|+.++......+
T Consensus 543 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~ 622 (719)
T 1z68_A 543 GDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVY 622 (719)
T ss_dssp CHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHH
T ss_pred chhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcccc
Confidence 110 11234568999999999999878888999999999999999999999999999999999987754321110
Q ss_pred cc-cccch--hhhHHHHHhcChhhhcCCCCC-CEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc
Q 004456 647 QT-EFRTL--WEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 722 (752)
Q Consensus 647 ~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 722 (752)
.. ....+ +.....+...++...+.++++ |+|++||++|.+|| +.++++++++|+..+++++++++|+++|.+ .
T Consensus 623 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~ 699 (719)
T 1z68_A 623 TERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-S 699 (719)
T ss_dssp HHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-C
T ss_pred chhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-C
Confidence 00 00111 344556777788888888887 89999999999999 999999999999999999999999999998 3
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 004456 723 RENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 723 ~~~~~~~~~~~~~fl~~~l~ 742 (752)
.+....+.+.+.+||+++|+
T Consensus 700 ~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 700 GLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp THHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHhhC
Confidence 55678899999999999884
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.1e-48 Score=449.37 Aligned_cols=589 Identities=15% Similarity=0.091 Sum_probs=401.7
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc--cccccccceEEecCCcEEEEEecCCCCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (752)
+..+|||++++|++... ......||+++..+++.++|+..... .....+..++|||||++|+|+.......
T Consensus 73 ~~p~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~-- 145 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHK-----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD-- 145 (695)
T ss_dssp CCCEEETTEEEEEEECT-----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS--
T ss_pred CCCEEECCEEEEEEEcC-----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc--
Confidence 44459999999987621 12357899999989988888753210 0011356889999999999986532111
Q ss_pred CCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc--cceeccccCCCCceEE
Q 004456 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--AVYTAVEPSPDQKYVL 190 (752)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~--~~~~~~~~SpDGk~l~ 190 (752)
..+|+++|+ +|+..+.... .....++|||||+.|+
T Consensus 146 ------------------------------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 146 ------------------------------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFY 183 (695)
T ss_dssp ------------------------------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEE
T ss_pred ------------------------------------------eEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEE
Confidence 168999999 5554412111 2237899999999999
Q ss_pred EEecccCccccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
|.+.+....-.........+|++|++.+++. +.+...+.. ......+.|||||++ |++.+....
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~-l~~~~~~~~--- 249 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKY-LFVYILRGW--- 249 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCC-EEEEEEETT---
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCE-EEEEEeCCC---
Confidence 9987542100000112345799999987752 334333211 011446899999998 777753311
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCcc-ceeccccccc
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA-PRVLFDRVFE 347 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~~~~~ 347 (752)
....|++++. .++..+.|.........+.| +||+ +++.++.+.....|++++++++... .+.+......
T Consensus 250 -----~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 250 -----SENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp -----TEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred -----CceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 2347888876 55677888766666666666 7888 8887765545678999999874210 1344332211
Q ss_pred cccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeec
Q 004456 348 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (752)
Q Consensus 348 ~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (752)
.. ...++|+ ++ .|++.... ....+|+++++.++..+.+...... .
T Consensus 320 ~~-----l~~~~~~-~~-~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~-------~--- 364 (695)
T 2bkl_A 320 AS-----LLSVSIV-GG-HLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG-------A--- 364 (695)
T ss_dssp CE-----EEEEEEE-TT-EEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS-------E---
T ss_pred Ce-----EEEEEEE-CC-EEEEEEEE------------------CCEEEEEEEeCCCCeeEEecCCCCe-------E---
Confidence 10 0014455 43 45555432 2234688999865545554322111 1
Q ss_pred CCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEeCCCCCC
Q 004456 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQ 507 (752)
Q Consensus 428 ~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~ 507 (752)
...+++|+|++.++|+.++...|+.||++|+.+++.+.|+..+.. .+...+..+.+.+.+.+|..+++++++|++...
T Consensus 365 -v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~ 442 (695)
T 2bkl_A 365 -ASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKR 442 (695)
T ss_dssp -ECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCCC
T ss_pred -EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCCC
Confidence 112478899999999999999999999999999998888876543 334557899999999999999999999987543
Q ss_pred CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC---CCchhHHHHHH
Q 004456 508 SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQLVS 584 (752)
Q Consensus 508 ~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~~~~ 584 (752)
. ++.|+||++|||++.... ..|. .....|+++||+|++++.++..++|... .........++
T Consensus 443 ~--~~~p~vl~~hGg~~~~~~---------~~~~----~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~ 507 (695)
T 2bkl_A 443 D--GNAPTLLYGYGGFNVNME---------ANFR----SSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFD 507 (695)
T ss_dssp S--SCCCEEEECCCCTTCCCC---------CCCC----GGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCccccC---------CCcC----HHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHH
Confidence 2 358999999998643210 1121 2344678999999997776655555431 11223456689
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc-----Cccccccch--hhhH
Q 004456 585 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEFRTL--WEAT 657 (752)
Q Consensus 585 d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~--~~~~ 657 (752)
|+.+++++|.+++.+|++||+|+|+||||++++.++.++|++|+++|+.+|+.+...... .+..+...+ .+..
T Consensus 508 D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~ 587 (695)
T 2bkl_A 508 DFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDF 587 (695)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHH
T ss_pred HHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHH
Confidence 999999999999989999999999999999999999999999999999999987542111 000011111 1223
Q ss_pred HHHHhcChhhhcCCCC--CCEEEEEeCCCCCCCCCHHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCc-cccHHHHHH
Q 004456 658 NVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAA-RENVMHVIW 731 (752)
Q Consensus 658 ~~~~~~~~~~~~~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~-~~~~~~~~~ 731 (752)
+.+...+|+.++.+++ +|+||+||++|.+|| +.++++++++|+. .+.++++++++++||++.. .........
T Consensus 588 ~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 665 (695)
T 2bkl_A 588 KTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSV 665 (695)
T ss_dssp HHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHH
T ss_pred HHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 4556778988888766 799999999999999 9999999999998 6789999999999999753 234567888
Q ss_pred HHHHHHHHHhcCCCCCCCCC
Q 004456 732 ETDRWLQKYCLSNTSDGKCG 751 (752)
Q Consensus 732 ~~~~fl~~~l~~~~~~~~~~ 751 (752)
.+.+||.++|+.......|.
T Consensus 666 ~~~~fl~~~l~~~~~~~~~~ 685 (695)
T 2bkl_A 666 DLYSFLFQVLDVQGAQGGVA 685 (695)
T ss_dssp HHHHHHHHHTTC--------
T ss_pred HHHHHHHHHcCCCCCCcchh
Confidence 89999999998876666663
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=5.2e-48 Score=445.22 Aligned_cols=587 Identities=13% Similarity=0.109 Sum_probs=402.0
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc--cccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
++..| +|||++++|+.+.. ......||+++..+++.+.|+..... .....+..++|||||++|+|.+....
T Consensus 75 ~~~~p--~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G 147 (710)
T 2xdw_A 75 KYSCH--FKKGKRYFYFYNTG-----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG 147 (710)
T ss_dssp EECCC--EEETTEEEEEEECS-----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT
T ss_pred cCCCC--EEECCEEEEEEEcC-----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC
Confidence 34555 49999999987521 12345899999888887755422110 00113568899999999999865321
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cceeccccCCCCc
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQK 187 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk 187 (752)
.. ..+|+++|+ +|+..+++.. ..+..++|||||+
T Consensus 148 ~~--------------------------------------------~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~ 183 (710)
T 2xdw_A 148 SD--------------------------------------------WVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGK 183 (710)
T ss_dssp CS--------------------------------------------CEEEEEEETTTTEEEEEEEEEECSCCEEECTTSS
T ss_pred Cc--------------------------------------------eEEEEEEECCCCCCCcccccCcccceEEEEeCCC
Confidence 11 148999999 6666554433 3467899999999
Q ss_pred eEEEEecccCcc---ccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEe
Q 004456 188 YVLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 188 ~l~~~~~~~~~~---~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~ 262 (752)
.|+|.+...... ..........+|++|++.+++. +.+...... ......+.|||||++ |++.+.
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----------~~~~~~~~~SpDg~~-l~~~~~ 252 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRY-VLLSIR 252 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCE-EEEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----------CeEEEEEEEcCCCCE-EEEEEE
Confidence 999998764310 0000112345799999987653 233222111 011346899999998 777753
Q ss_pred ccCCCCccccCccceEEeccCCCCCC------C--CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 263 QDRGDANVEVSPRDIIYTQPAEPAEG------E--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~------~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
.... ....|+++|+ ++ + ..+.+........ ..|+|||+.|++.++......+|++++++++
T Consensus 253 ~~~~-------~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 253 EGCD-------PVNRLWYCDL---QQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp CSSS-------SCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred ccCC-------CccEEEEEEC---cccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 2110 1447999988 33 2 4566665444433 3599999999999876655678999999874
Q ss_pred Cc-cceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc-eeEEee
Q 004456 335 DV-APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-KERIWE 412 (752)
Q Consensus 335 ~~-~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~-~~~l~~ 412 (752)
.. ..+.+........ .-.++|++++ .|++.... ....+|+++|+.+|+ .+.|..
T Consensus 322 ~~~~~~~l~~~~~~~~-----~~~~~~~~~~-~lv~~~~~------------------~g~~~l~~~~~~~g~~~~~l~~ 377 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDV-----LEWVACVRSN-FLVLCYLH------------------DVKNTLQLHDLATGALLKIFPL 377 (710)
T ss_dssp CGGGCEEEECCCSSCE-----EEEEEEETTT-EEEEEEEE------------------TTEEEEEEEETTTCCEEEEECC
T ss_pred CcccceeccCCCCCCe-----EEEEEEEcCC-EEEEEEEE------------------CCEEEEEEEECCCCCEEEecCC
Confidence 21 1234443221100 0015577554 55555532 223469999987776 455543
Q ss_pred ccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC--eeEeecCCCCCCCcCCCceEEEEEEcC
Q 004456 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQRK 490 (752)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~~~~~~~~ 490 (752)
... .+. .+++++|++.++|+.++...|+.||.+|+.+++ .+.+........+...+.++.+.+.+.
T Consensus 378 ~~~-----~v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 445 (710)
T 2xdw_A 378 EVG-----SVV-------GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSK 445 (710)
T ss_dssp CSS-----EEE-------EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECT
T ss_pred CCc-----eEE-------EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcC
Confidence 211 112 247889999999999999999999999999988 676766443322445678999999999
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGE 569 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~ 569 (752)
+|..|++++++|++.... ++.|+||++||++..... ..| ......|++ +||+|++++.++..++
T Consensus 446 dg~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~~---------~~~----~~~~~~l~~~~G~~v~~~d~rG~g~~ 510 (710)
T 2xdw_A 446 DGTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNISIT---------PNY----SVSRLIFVRHMGGVLAVANIRGGGEY 510 (710)
T ss_dssp TSCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCCCC---------CCC----CHHHHHHHHHHCCEEEEECCTTSSTT
T ss_pred CCCEEEEEEEecCCCCCC--CCccEEEEEcCCCCCcCC---------Ccc----cHHHHHHHHhCCcEEEEEccCCCCCC
Confidence 999999999999876432 358999999998632210 111 123456777 9999999776655444
Q ss_pred CCCC---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-
Q 004456 570 GDKL---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG- 645 (752)
Q Consensus 570 g~~~---~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~- 645 (752)
|... .........++|+.+++++|.+++.+|++||+|+|+||||++++.++.++|++|+++|+.+|+.+.......
T Consensus 511 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~ 590 (710)
T 2xdw_A 511 GETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT 590 (710)
T ss_dssp HHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST
T ss_pred ChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccC
Confidence 4321 111233456799999999999998899999999999999999999999999999999999998875322110
Q ss_pred ----ccccccc--hhhhHHHHHhcChhhhcC-----CCCC-CEEEEEeCCCCCCCCCHHHHHHHHHHHHhC-------CC
Q 004456 646 ----FQTEFRT--LWEATNVYIEMSPITHAN-----KIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGH-------GA 706 (752)
Q Consensus 646 ----~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~-------~~ 706 (752)
+..+... ..+..+.+...+|+.++. ++++ |+||+||++|.+|| +.++.+++++|+.. +.
T Consensus 591 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~ 668 (710)
T 2xdw_A 591 IGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNN 668 (710)
T ss_dssp TGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCS
T ss_pred CChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCc
Confidence 1011111 123344566778998888 7886 99999999999999 99999999999987 88
Q ss_pred cEEEEEeCCCCccCCcc-ccHHHHHHHHHHHHHHHhcCC
Q 004456 707 LSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 707 ~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~~~ 744 (752)
++++++++++||++... .........+.+||.++|+..
T Consensus 669 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 707 (710)
T 2xdw_A 669 PLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 707 (710)
T ss_dssp CEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999997643 235678889999999999754
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=6e-47 Score=433.58 Aligned_cols=581 Identities=13% Similarity=0.079 Sum_probs=397.0
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCC---CccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP---DICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~---~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
+..+++|.++.|..+. . .....-+|....++++. .|.... ... ...+..+.|||||++|+|+.......
T Consensus 82 ~~p~~~g~~~y~~~~~----~-~~~~~~~~r~~~~~~~~-vllD~n~la~~~-~~~l~~~~~SpDg~~lAy~~~~~G~~- 153 (693)
T 3iuj_A 82 GAPFREGRYHYFFKND----G-LQNQNVLWRQQEGKPAE-VFLDPNTLSPDG-TTALDQLSFSRDGRILAYSLSLAGSD- 153 (693)
T ss_dssp CCCEEETTEEEEEEEC----S-SCSSCEEEEECTTSCCE-EEECGGGGSTTS-CCEEEEEEECTTSSEEEEEEECSSCC-
T ss_pred CCCEEECCEEEEEEEc----C-CCceeEEEEeCCCCCcE-EEEehhhccCCC-cEEEEEEEECCCCCEEEEEEecCCCc-
Confidence 3446789999887541 1 12224566655444432 222110 111 11356789999999999986532221
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCccc-eeccccCCCCceEE
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV-YTAVEPSPDQKYVL 190 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~~~-~~~~~~SpDGk~l~ 190 (752)
...|+++|+ +|+..+.+.... ...++|| ||+.|+
T Consensus 154 -------------------------------------------~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 154 -------------------------------------------WREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFF 189 (693)
T ss_dssp -------------------------------------------EEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEE
T ss_pred -------------------------------------------eEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEE
Confidence 268999999 666555432222 5789999 999999
Q ss_pred EEecccCccccccccCccccEEEEecCCcee--EEecCCCC-CCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPP-AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~-~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|.+...+..........+.+|+++++.+... +.+...+. . ......+.|||||++ |++.+....
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~----------~~~~~~~~~SpDg~~-l~~~~~~~~-- 256 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ----------HHRYVGATVTEDDRF-LLISAANST-- 256 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG----------CCSEEEEEECTTSCE-EEEEEESSS--
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC----------CeEEEEEEEcCCCCE-EEEEEccCC--
Confidence 9987742100000112346899999886543 34443322 1 011346789999998 777653321
Q ss_pred CccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCc-cceecccccc
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRVF 346 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~~ 346 (752)
....++++++.. .....+.++........+ |+++|+.|+|.++.+..+.+|+.++++++.. ..+.++....
T Consensus 257 ------~~~~i~~~d~~~-~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 257 ------SGNRLYVKDLSQ-ENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp ------SCCEEEEEETTS-TTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred ------CCcEEEEEECCC-CCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 224799999831 112566776555444444 8999999999987665567899999988521 1133443322
Q ss_pred ccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeee
Q 004456 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (752)
Q Consensus 347 ~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (752)
.. +.|+++|++|++.... ....+|+++|++++..+.|...... .+.
T Consensus 329 ~~---------~~~s~~g~~lv~~~~~------------------~g~~~l~~~d~~g~~~~~l~~p~~~----~~~--- 374 (693)
T 3iuj_A 329 QV---------LTVHSGSGYLFAEYMV------------------DATARVEQFDYEGKRVREVALPGLG----SVS--- 374 (693)
T ss_dssp SC---------EEEEEETTEEEEEEEE------------------TTEEEEEEECTTSCEEEEECCSSSS----EEE---
T ss_pred CE---------EEEEEECCEEEEEEEE------------------CCeeEEEEEECCCCeeEEeecCCCc----eEE---
Confidence 11 2589999999988754 2234699999987777666433211 111
Q ss_pred cCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEeCCCCC
Q 004456 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYD 506 (752)
Q Consensus 427 ~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~ 506 (752)
.+++++|++.++|..++...|+.+|.+|+.+++.+.|+..+.. .+...+.++.+.+++.+|..|++++++|++..
T Consensus 375 ----~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~ 449 (693)
T 3iuj_A 375 ----GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAP-FKPEDYVSEQRFYQSKDGTRVPLIISYRKGLK 449 (693)
T ss_dssp ----ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSS-CCGGGEEEEEEEEECTTSCEEEEEEEEESSCC
T ss_pred ----eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCC-cChhhCeeEEEEEecCCCcEEEEEEEecCCCC
Confidence 2367899999999999999999999999999998888876643 33455789999999999999999999998754
Q ss_pred CCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC---CCchhHHHHH
Q 004456 507 QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQLV 583 (752)
Q Consensus 507 ~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~~~ 583 (752)
+. ++.|+||++|||++... ...+......|+++||+|+++++++..++|..+ .........+
T Consensus 450 ~~--~~~P~ll~~hGg~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 514 (693)
T 3iuj_A 450 LD--GSNPTILYGYGGFDVSL-------------TPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVF 514 (693)
T ss_dssp CS--SCCCEEEECCCCTTCCC-------------CCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred CC--CCccEEEEECCCCCcCC-------------CCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcH
Confidence 32 35899999999853211 111123456888999999998777666555431 1122334568
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc---C--ccccccchh--hh
Q 004456 584 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF---G--FQTEFRTLW--EA 656 (752)
Q Consensus 584 ~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~---~--~~~~~~~~~--~~ 656 (752)
+|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+...... + +..+...+. ..
T Consensus 515 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~ 594 (693)
T 3iuj_A 515 DDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEA 594 (693)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHH
T ss_pred HHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999988543211 0 000111111 11
Q ss_pred -HHHHHhcChhhhcCC-CCCC-EEEEEeCCCCCCCCCHHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCcc-ccHHHH
Q 004456 657 -TNVYIEMSPITHANK-IKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAAR-ENVMHV 729 (752)
Q Consensus 657 -~~~~~~~~~~~~~~~-~~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~-~~~~~~ 729 (752)
...+...+|+.++.+ +++| +||+||++|.+|| +.++++++++|++. +.++++++++++||++... ......
T Consensus 595 ~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 672 (693)
T 3iuj_A 595 MFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQ 672 (693)
T ss_dssp HHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHH
T ss_pred HHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHH
Confidence 345667899999998 8887 9999999999999 99999999999987 4789999999999997653 456678
Q ss_pred HHHHHHHHHHHhcCCC
Q 004456 730 IWETDRWLQKYCLSNT 745 (752)
Q Consensus 730 ~~~~~~fl~~~l~~~~ 745 (752)
...+.+||.++|+...
T Consensus 673 ~~~~~~fl~~~l~~~~ 688 (693)
T 3iuj_A 673 SADIYAFTLYEMGYRE 688 (693)
T ss_dssp HHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHcCCCC
Confidence 8899999999998764
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=5e-47 Score=438.57 Aligned_cols=582 Identities=12% Similarity=0.081 Sum_probs=389.7
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcc---cCcceeccCCCCc--cccccccceEEecCCcEEEEEecCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~---~g~~~~lt~~~~~--~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
+..+|||++++|+++.. ......||+++.. +++.++|+..... .....+..+.|||||+.|+|.+.....
T Consensus 112 ~~p~pdG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~ 186 (741)
T 1yr2_A 112 GLPQRRGASVFYSWNSG-----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS 186 (741)
T ss_dssp CCCEEETTEEEEEEECS-----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCEEECCEEEEEEEcC-----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC
Confidence 44469999999987621 1224789999987 7777775432110 001135688999999999998653211
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cceeccccCCCCce
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
...+|+++|+ +|+..+.... .....++|||| +.
T Consensus 187 --------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~ 221 (741)
T 1yr2_A 187 --------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DA 221 (741)
T ss_dssp --------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SE
T ss_pred --------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CE
Confidence 1158999999 5565544222 33468999999 99
Q ss_pred EEEEecccCcc-ccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 189 VLITSMHRPYS-YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 189 l~~~~~~~~~~-~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
|+|.+...+.. ..........+|+++++.+... +.+...+.. ......+.|||||++ |++.+....
T Consensus 222 l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~-l~~~~~~~~ 290 (741)
T 1yr2_A 222 LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----------PKRGHGASVSSDGRW-VVITSSEGT 290 (741)
T ss_dssp EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCE-EEEEEECTT
T ss_pred EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----------CeEEEEEEECCCCCE-EEEEEEccC
Confidence 99998654310 0001112245799999976642 233322211 011346899999998 777753211
Q ss_pred CCCccccCccceEEeccCCCCCCC--C-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecc
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 342 (752)
.....|+++|+ +++ . .+.|.........+ ++|||+.|++.++....+.+|++++++++....+.+.
T Consensus 291 -------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 291 -------DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp -------CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred -------CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 12447999998 444 5 66776554444444 5699999999987665577899999987311223343
Q ss_pred ccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhce
Q 004456 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (752)
Q Consensus 343 ~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (752)
....... ..++|+ +..|++.... ....+|++++++++..+.|...... .+
T Consensus 360 ~~~~~~l------~~~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~v 409 (741)
T 1yr2_A 360 PESKDNL------ESVGIA--GNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG----SA 409 (741)
T ss_dssp CCCSSEE------EEEEEE--BTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC----EE
T ss_pred cCCCCeE------EEEEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCceeeccCCCCe----EE
Confidence 3221110 013344 5566666533 2234689999866555555422111 11
Q ss_pred eeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEeC
Q 004456 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLP 502 (752)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~P 502 (752)
. .+++++|++.|+|+.++...|++||++|+.+++.+.++... ...+...+..+.+.+.+.+|..++++++.|
T Consensus 410 ~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p 481 (741)
T 1yr2_A 410 S-------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH-LTFDPADFRVEQVFYPSKDGTKVPMFIVRR 481 (741)
T ss_dssp E-------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC-CSSCGGGEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E-------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC-CCCChhHCEEEEEEEEcCCCCEEEEEEEec
Confidence 1 24789999999999999999999999999999877776532 222445678999999999999999999999
Q ss_pred CCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC---CCchhH
Q 004456 503 PGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFV 579 (752)
Q Consensus 503 ~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~ 579 (752)
++. .++.|+||++||++.... ...+......|+++||+|++++.++..++|..+ ......
T Consensus 482 ~~~----~~~~p~vl~~hGg~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 482 KDA----KGPLPTLLYGYGGFNVAL-------------TPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp TTC----CSCCCEEEECCCCTTCCC-------------CCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGT
T ss_pred CCC----CCCCcEEEEECCCCCccC-------------CCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcC
Confidence 874 235899999999863321 011123455788999999997766555544321 111223
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc---C--ccccccch-
Q 004456 580 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF---G--FQTEFRTL- 653 (752)
Q Consensus 580 ~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~---~--~~~~~~~~- 653 (752)
...++|+.+++++|.+++.+|++||+|+|+||||++++.++.++|++|+++|+.+|+.+...... + +..+...+
T Consensus 545 ~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~ 624 (741)
T 1yr2_A 545 QNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPE 624 (741)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTT
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCC
Confidence 45689999999999999889999999999999999999999999999999999999887543110 0 00111111
Q ss_pred -hhhHHHHHhcChhhhcCC-CC-CCEEEEEeCCCCCCCCCHHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCcc-ccH
Q 004456 654 -WEATNVYIEMSPITHANK-IK-KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-ENV 726 (752)
Q Consensus 654 -~~~~~~~~~~~~~~~~~~-~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~~-~~~ 726 (752)
.+..+.+...+|+.++.. ++ +|+||+||++|.+|| +.++++++++|+. .+.++++++++++||++... ...
T Consensus 625 ~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~ 702 (741)
T 1yr2_A 625 KEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQ 702 (741)
T ss_dssp SHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHH
T ss_pred CHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHH
Confidence 122345567889888887 88 499999999999999 9999999999999 88899999999999997542 334
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 004456 727 MHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 727 ~~~~~~~~~fl~~~l~~~~~ 746 (752)
......+.+||.++|+....
T Consensus 703 ~~~~~~~~~fl~~~l~~~~~ 722 (741)
T 1yr2_A 703 IEETADVQAFLAHFTGLTPR 722 (741)
T ss_dssp HHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHcCCCcc
Confidence 57888999999999986544
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=4.3e-44 Score=411.80 Aligned_cols=570 Identities=14% Similarity=0.066 Sum_probs=384.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEc---ccC--cceeccCCC----CccccccccceEEe-cCCcEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA---ETG--EAKPLFESP----DICLNAVFGSFVWV-NNSTLL 101 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~---~~g--~~~~lt~~~----~~~~~~~~~~~~ws-pdg~~l 101 (752)
..+.|. ++|.+++|+... . ......+|+.+. +++ ..+.|.... ...+ ..+..+.|| |||++|
T Consensus 118 ~~~~p~--~~g~~~yy~~~~----~-g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~-~~~~~~~~S~PDG~~l 189 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREV----K-GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF-CDVMEVKPAPPEHDLV 189 (751)
T ss_dssp EECCCE--EETTEEEEEEEC----T-TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC-CEEEEEEECTTTTCEE
T ss_pred cCCCCe--EECCEEEEEEEC----C-CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe-EEEeeeEecCCCCCEE
Confidence 455554 799999998652 1 122356788876 454 434433221 1010 024578999 999999
Q ss_pred EEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc--cce
Q 004456 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP--AVY 177 (752)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~--~~~ 177 (752)
+|+....... ..+||++++ +| + .+... ...
T Consensus 190 Ay~~~~~G~~--------------------------------------------~~~l~v~dl~~g~~--~l~~~~~~~~ 223 (751)
T 2xe4_A 190 AFSVDMSGNE--------------------------------------------VYTIEFKRISDPSQ--TIADKVSGTN 223 (751)
T ss_dssp EEEEESSSSS--------------------------------------------CEEEEEEETTCTTC--CCCCCEEEEC
T ss_pred EEEEeCCCCc--------------------------------------------eEEEEEEECCCCCE--eCCccccCce
Confidence 9986532111 157999999 55 4 22222 335
Q ss_pred eccccCCCCceEEEEecccCccccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCc
Q 004456 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (752)
Q Consensus 178 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~ 255 (752)
.++.|||||+.|+|++.+.. ..+.+|+++++.+++. +.+...+.. .....+.|||||++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~~~lv~~~~~~-----------~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSEDVCLYEEHNP-----------LFSAFMYKAADTNT 284 (751)
T ss_dssp SCCEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGGCEEEEECCCT-----------TCEEEEEECTTSSE
T ss_pred eeEEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchhcEEEEecCCC-----------ceEEEEEECCCCCE
Confidence 68999999999999976531 1235799999987642 233222111 00235789999998
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCCC--CC--eEEeecccceeeeeeecC---CceEEEeeecc-cCceeEE
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KP--EILHKLDLRFRSVSWCDD---SLALVNETWYK-TSQTRTW 327 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~--~~l~~~~~~~~~~~~spD---g~~l~~~~~~~-~~~~~l~ 327 (752)
|++.+... ....|+++++ +++ .. +.++... ..+.|+++ |+.|+|.++.+ ..+.+|+
T Consensus 285 -l~~~~~~~---------~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 285 -LCIGSQSP---------ETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp -EEEEEECS---------SCEEEEEEES---SSCTTCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEE
T ss_pred -EEEEecCC---------CCceEEEEEC---CCCCCCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEE
Confidence 77776321 3447999998 333 34 5555433 23456666 99999988765 4667899
Q ss_pred EEcCCCCCcccee-ccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEec----
Q 004456 328 LVCPGSKDVAPRV-LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI---- 402 (752)
Q Consensus 328 ~~~~~~~~~~~~~-l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~---- 402 (752)
+++++++ ...+. +....... . .-.+++++++|++.... ....+|+++|+
T Consensus 349 ~~d~~~~-~~~~~~li~~~~~~-----~--l~~~~~~~~~lv~~~~~------------------~g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 349 IAPRGQP-SDWSHVLVDHSEDV-----F--MESIAVRSNYLVVAGRR------------------AGLTRIWTMMADSQD 402 (751)
T ss_dssp EEETTST-TCCCCEEECCCSSE-----E--EEEEEECSSEEEEEEEE------------------TTEEEEEEEECCTTT
T ss_pred EEcCCCc-ccceeeEECCCCCc-----E--EEEEEEECCEEEEEEEe------------------CCEEEEEEEeccccc
Confidence 9998753 12222 32222110 0 01245567788877643 22346889986
Q ss_pred ---CCCc-eeEEeeccchhhhhceeeeecCCcceec----ccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCC-
Q 004456 403 ---NTGS-KERIWESNREKYFETAVALVFGQGEEDI----NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP- 473 (752)
Q Consensus 403 ---~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~----s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~- 473 (752)
.+++ .+.|...... .... +++ ++|++.++|+.++...|+++|.+|+.+++.++|+..+..
T Consensus 403 ~~~~~g~~~~~l~l~~~~----~~~~-------~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~ 471 (751)
T 2xe4_A 403 GVFKAGTGLREVVMEEPI----FTVH-------LVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGG 471 (751)
T ss_dssp SCCCTTTCCEECCCCCSS----CEEE-------ECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCT
T ss_pred ccccCCccceEECCCCce----eEEE-------eccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEecccccc
Confidence 5666 6666322211 0111 122 568999999999999999999999999998888876542
Q ss_pred CCCcCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh
Q 004456 474 YPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA 553 (752)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 553 (752)
..+...+.++.+++++.+|..|++++++|++..+. ++.|+||++||++..... ..|. .....|++
T Consensus 472 ~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~---------~~~~----~~~~~l~~ 536 (751)
T 2xe4_A 472 GFDAANYKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMD---------PQFS----IQHLPYCD 536 (751)
T ss_dssp TCCGGGEEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCC---------CCCC----GGGHHHHT
T ss_pred CCCccceEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCC---------Ccch----HHHHHHHh
Confidence 22334567899999999999999999999875432 358999999998632210 1121 23557889
Q ss_pred CCcEEEecCCCCCCCCCCCC----CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 554 RRFAVLAGPSIPIIGEGDKL----PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 554 ~G~~v~~~~~~~~~g~g~~~----~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
+||+|+++++++..++|..+ .........++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|++
T Consensus 537 ~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a 616 (751)
T 2xe4_A 537 RGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKV 616 (751)
T ss_dssp TTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSE
T ss_pred CCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeE
Confidence 99999998877666655431 11223346789999999999999889999999999999999999999999999999
Q ss_pred EEEccCCCCCCCC------ccC--ccccccch--hhhHHHHHhcChhhhcCCCCCC-EEEEEeCCCCCCCCCHHHHHHHH
Q 004456 630 GIARSGSYNKTLT------PFG--FQTEFRTL--WEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFF 698 (752)
Q Consensus 630 ~v~~~~~~~~~~~------~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~ 698 (752)
+|+.+|+.+.... ++. .......+ .+....+...+|+.++.++++| +||+||++|.+|| +.++.+++
T Consensus 617 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~ 694 (751)
T 2xe4_A 617 ALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWV 694 (751)
T ss_dssp EEEESCCCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHH
T ss_pred EEEeCCcchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHH
Confidence 9999998763211 100 00011111 1122345677999999999997 9999999999999 99999999
Q ss_pred HHHHhCC---CcEEEEEeCCCCccCCccc-cHHHHHHHHHHHHHHHhcCC
Q 004456 699 DALKGHG---ALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 699 ~~l~~~~---~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~~l~~~ 744 (752)
++|+..+ ..+.+.++++++|++.... ........+.+||.++|+..
T Consensus 695 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~ 744 (751)
T 2xe4_A 695 SKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKST 744 (751)
T ss_dssp HHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCC
Confidence 9999874 4567777899999976332 34566778999999999764
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=4.5e-35 Score=327.79 Aligned_cols=509 Identities=11% Similarity=0.059 Sum_probs=333.3
Q ss_pred cEEEEEcc-CCCcc--ccCCcc--------ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCce--eEE
Q 004456 157 AQLVLGSL-DGTAK--DFGTPA--------VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRE 223 (752)
Q Consensus 157 ~~i~~~~~-~G~~~--~l~~~~--------~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~ 223 (752)
..+..+|+ +|+.. .+.... .+..++|- |++.++|.+.-.+.+ .....++.+++.|.+.+.. .+.
T Consensus 156 ~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~Gt~~~~~~~ 232 (711)
T 4hvt_A 156 MFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE--ITSSLYPNSLYIWKRGESIEKAKK 232 (711)
T ss_dssp EEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC--BCTTSSBCEEEEEETTSCGGGCEE
T ss_pred eEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCC--cCcCCCCCEEEEEECCCChHHCeE
Confidence 57888888 66332 122001 12455887 777777765433321 2234556789999987653 334
Q ss_pred ecCCCCCCCCCcccCCccccccceeeeeCCCce--EEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccce
Q 004456 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPST--LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (752)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~--l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 301 (752)
+...+.... .-....++|+++. +.+++.. ....+..+|+++++. ..++...|.... .
T Consensus 233 v~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~-~~~~~~~l~~~~-~- 291 (711)
T 4hvt_A 233 LFEVPKEYI-----------YVSAGKLLSDTISSSLIFISAN-------KDFYNYDNYILDTKY-KNLKLQKINMPS-D- 291 (711)
T ss_dssp EEECCTTSC-----------EEEEEESSCTTTCSSEEEEEEE-------SSSSCEEEEEEECSS-SSCEEEECCSCT-T-
T ss_pred EeccCCCce-----------EEEEEEecCCCceEEEEEEEEe-------cccCceeEEEEcCCC-CCCcceEeecCC-c-
Confidence 443332210 1124456777752 1233221 011345788887621 112333442221 1
Q ss_pred eeeeeecCCceEEEee-e-cc----cCceeEEEEcCCCCC------cccee-ccccccccccCCCCCCceeeCCCCCeEE
Q 004456 302 RSVSWCDDSLALVNET-W-YK----TSQTRTWLVCPGSKD------VAPRV-LFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (752)
Q Consensus 302 ~~~~~spDg~~l~~~~-~-~~----~~~~~l~~~~~~~~~------~~~~~-l~~~~~~~~~~~~~~p~~~~s~dg~~l~ 368 (752)
..+.++.+++.++... + .. ....+|+.++++++. ...+. +......... .+.|+.+ +|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~--~l~ 363 (711)
T 4hvt_A 292 ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFN------FISTTKD--RVF 363 (711)
T ss_dssp CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEE------EEEECSS--CEE
T ss_pred ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEE------EEEEECC--EEE
Confidence 2345677776655542 1 11 145679999987631 11222 2221111100 1456655 455
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc--eeE-EeeccchhhhhceeeeecCCcceecccCCCEEEEEE
Q 004456 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KER-IWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 445 (752)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~ 445 (752)
+.... ....+|+++|+.+|+ .+. +...... ... ..+.+++++.++++.
T Consensus 364 ~~~~~------------------~~~~~l~~~~~~~g~~~~~~~i~lp~~~-----~~~------~~~~~~~~~~~~~~~ 414 (711)
T 4hvt_A 364 LATYD------------------NVVAKVVTFTLENEQWTKPVVLKLPYQN-----AIF------GMSSYEEEEEALITI 414 (711)
T ss_dssp EEEEE------------------TTEEEEEEECEETTEECCCEEECCCSTT-----CEE------EEECCTTCSCEEEEE
T ss_pred EEEEE------------------CCEEEEEEEECCCCceEEEeccCCCCCe-----EEE------EEeecCcCCEEEEEE
Confidence 55432 223368899987774 344 3211111 111 135678899999999
Q ss_pred ecCCCCcEEEEEECCCCCeeEeecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCc
Q 004456 446 ESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYK 525 (752)
Q Consensus 446 ~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~ 525 (752)
++...|+.+|.+|+. ++.++|+..+..+ ....+.++.+.+++.||..|++++++|++.++. ++.|+||++|||++.
T Consensus 415 ss~~~P~~~~~~d~~-~~~~~l~~~~~~~-~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~--~~~P~vl~~HGG~~~ 490 (711)
T 4hvt_A 415 ENSIVPPTIYLWVKT-HELKIIRKALYSF-DSENYVLEQKEATSFDGVKIPYFLVYKKGIKFD--GKNPTLLEAYGGFQV 490 (711)
T ss_dssp ECSSSCCEEEEECTT-SCEEEEECCSSCC-CGGGEEEEEEEEECTTSCEEEEEEEEETTCCCS--SCCCEEEECCCCTTC
T ss_pred ecCCCCCEEEEEeCC-CcEEEEecCCccc-CcccCeeEEEEEECCCCeEEEEEEEecCCCCCC--CCccEEEEECCCCCC
Confidence 999999999999988 8888888775433 334568999999999999999999999986443 358999999998643
Q ss_pred CcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCC
Q 004456 526 SKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPS 602 (752)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~ 602 (752)
... ..+. ....+.|+++||+|+.+++++..++|.. ..........++|+.++++||.+++.+|++
T Consensus 491 ~~~---------~~~~---~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~ 558 (711)
T 4hvt_A 491 INA---------PYFS---RIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPE 558 (711)
T ss_dssp CCC---------CCCC---HHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGG
T ss_pred CCC---------Cccc---HHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcc
Confidence 211 1111 1222478899999999888777666643 122344567789999999999999999999
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc-----Cccccccchh--hhHHHHHhcChhhhcCCCCC-
Q 004456 603 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEFRTLW--EATNVYIEMSPITHANKIKK- 674 (752)
Q Consensus 603 ~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 674 (752)
||+|+|+|+||++++.++.++|++|+++|+.+|+.++..... .+..+...++ +..+.+...+|+.++.++++
T Consensus 559 rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~ 638 (711)
T 4hvt_A 559 YLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKY 638 (711)
T ss_dssp GEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCC
T ss_pred cEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCC
Confidence 999999999999999999999999999999999988543211 0101111121 23455778899999998876
Q ss_pred -CEEEEEeCCCCCCCCCHHHHHHHHHHH-HhCCCcEEEEEeCCCCccCCcc-ccHHHHHHHHHHHHHHHhcCC
Q 004456 675 -PILIIHGEVDDKVGLFPMQAERFFDAL-KGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 675 -P~li~~G~~D~~v~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~~~ 744 (752)
|+||+||++|.+|| +.++.+++++| +..|.+++++++|+++|++... .........+.+||.++|+..
T Consensus 639 pPvLii~G~~D~~Vp--~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~~ 709 (711)
T 4hvt_A 639 PTVLITDSVLDQRVH--PWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKLK 709 (711)
T ss_dssp CEEEEEEETTCCSSC--THHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEecCCCCcCC--hHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999 99999999999 9999999999999999997543 334566778999999999753
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.94 E-value=1.8e-25 Score=238.08 Aligned_cols=354 Identities=11% Similarity=0.058 Sum_probs=222.4
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCc---eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGA---KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~---~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
.+|+.+..+ +..++++..+... ....|+|||||++|||++.. ++..+||++++++++.+++|....
T Consensus 12 ~~~~~~~~g----~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------~g~~~l~~~d~~~g~~~~lt~~~~ 80 (388)
T 3pe7_A 12 DTYQDASTG----AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF-------DGPWNYYLLDLNTQVATQLTEGRG 80 (388)
T ss_dssp EEEECTTTC----CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTCEEEECCCSSC
T ss_pred eEEecCCCC----cceEEecCCcccccchhhcCccCCCCCCEEEEEEcC-------CCCceEEEEeCCCCceEEeeeCCC
Confidence 456655555 7888888544321 12349999999999997642 345689999999999999987654
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
.. +..+.|||||+.|+|.... ..|+++
T Consensus 81 ~~----~~~~~~spdg~~l~~~~~~-------------------------------------------------~~l~~~ 107 (388)
T 3pe7_A 81 DN----TFGGFLSPDDDALFYVKDG-------------------------------------------------RNLMRV 107 (388)
T ss_dssp BC----SSSCEECTTSSEEEEEETT-------------------------------------------------TEEEEE
T ss_pred CC----ccceEEcCCCCEEEEEeCC-------------------------------------------------CeEEEE
Confidence 21 2356899999999998421 479999
Q ss_pred cc-CCCccccCCc--ccee--ccccCCCCceEEEEecccCccccc---------cccCccccEEEEecCCceeEEecCCC
Q 004456 163 SL-DGTAKDFGTP--AVYT--AVEPSPDQKYVLITSMHRPYSYKV---------PCARFSQKVQVWTTDGKLVRELCDLP 228 (752)
Q Consensus 163 ~~-~G~~~~l~~~--~~~~--~~~~SpDGk~l~~~~~~~~~~~~~---------~~~~~~~~l~~~d~~~~~~~~l~~~~ 228 (752)
++ +|+.+.+... .... ...++|||+.|+............ ........|+++|+.+++.+.++...
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 187 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN 187 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES
T ss_pred ECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC
Confidence 99 5666555433 2222 234599999998754332110000 00112368999999988888776543
Q ss_pred CCCCCCcccCCccccccceeeee-CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc--cceeeee
Q 004456 229 PAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVS 305 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~~~~ 305 (752)
.. +..+.||| ||+. |+|+..... ......|+++++ +++..+.++... ..+..++
T Consensus 188 ~~-------------~~~~~~sp~dg~~-l~~~~~~~~------~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 188 QW-------------LGHPIYRPYDDST-VAFCHEGPH------DLVDARMWLINE---DGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp SC-------------EEEEEEETTEEEE-EEEEECSCT------TTSSCSEEEEET---TSCCCEESCCCCTTEEEEEEE
T ss_pred cc-------------ccccEECCCCCCE-EEEEEecCC------CCCcceEEEEeC---CCCceEEeeeCCCCcccccce
Confidence 22 45789999 9998 888764210 112447999988 667777777655 3467899
Q ss_pred eecCCceEEEeeecccC-ceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEc
Q 004456 306 WCDDSLALVNETWYKTS-QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLN 384 (752)
Q Consensus 306 ~spDg~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 384 (752)
|||||+.|+|.+..... ...||+++++++ +.+.++......... ......+|||||++|++...+.
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~---------- 311 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETL--ENRQLTSMPACSHLM-SNYDGSLMVGDGSDAPVDVQDD---------- 311 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTC--CEEEEEEECCEEEEE-ECTTSSEEEEEECCC-----------------
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCC--ceEEEEcCCCceeee-ecCCCCeEccCCCcceeEeeec----------
Confidence 99999999998754432 235999999984 444554322200000 0011135899999999876321
Q ss_pred cCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 385 GRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 385 ~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
.|++ ......|+++|+++++.++|+..... +......-......++|||||++|+|+.... ..++||++++..+.
T Consensus 312 -~~~~-~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 312 -SGYK-IENDPFLYVFNMKNGTQHRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPESV 386 (388)
T ss_dssp -------CCCCEEEEEETTTTEEEEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGGG
T ss_pred -cccc-cCCCCEEEEEeccCCceEEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChhc
Confidence 1111 12234799999999998888765431 0000000000123468999999999986554 46689999987543
No 15
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.6e-23 Score=242.16 Aligned_cols=334 Identities=10% Similarity=0.040 Sum_probs=216.4
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc-cccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-CLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~-~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
....++|||||++|+. . ...|+++++++|+.+++...... ........+.|||||+.|+|.+.....
T Consensus 18 ~~~~~~w~~dg~~~~~-----------~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYK-----------Q-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp CCCCEEECSSSEEEEE-----------E-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred cccccEECCCCcEEEE-----------c-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeee
Confidence 4667999999987766 2 36899999999998777544331 111112247999999999998542111
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cceeccccCCCCce
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.+...+.+|++|+ +|+.++++.. .....++|||||++
T Consensus 86 ----------------------------------------~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~ 125 (740)
T 4a5s_A 86 ----------------------------------------WRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHK 125 (740)
T ss_dssp ----------------------------------------SSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTC
T ss_pred ----------------------------------------EEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCE
Confidence 11112368999999 6688888876 77899999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC----CCcccCCcc--ccccceeeeeCCCceEEEEEe
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IPVCYNSVR--EGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~~~~~~~~--~~~~~~~wspDG~~~l~~~~~ 262 (752)
|+|.+.. +|+++++.+++.++++....... .+.++..++ .....++|||||++ |+|.+.
T Consensus 126 la~~~~~--------------~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~ 190 (740)
T 4a5s_A 126 LAYVWNN--------------DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQF 190 (740)
T ss_dssp EEEEETT--------------EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEE
T ss_pred EEEEECC--------------eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEE
Confidence 9998532 79999999988888876432211 111110000 12346899999999 888875
Q ss_pred ccCCCCcc------------------------ccCccceEEeccCCCCCC---C---CCeEEee------cccceeeeee
Q 004456 263 QDRGDANV------------------------EVSPRDIIYTQPAEPAEG---E---KPEILHK------LDLRFRSVSW 306 (752)
Q Consensus 263 ~~~~~~~~------------------------~~~~~~~l~~~~~~~~~~---~---~~~~l~~------~~~~~~~~~~ 306 (752)
.+...... .......|+++|+ ++ + ....+.. ....+..++|
T Consensus 191 d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w 267 (740)
T 4a5s_A 191 NDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDVTW 267 (740)
T ss_dssp ECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred cccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence 44321110 0112236899998 55 4 3444543 3445788999
Q ss_pred ecCCceEEEeeecccCceeEEEEcCCCCCc-----cceec-cccccccccC-CCCCCceeeCCCCCeEE-EeeeecCCcc
Q 004456 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDV-----APRVL-FDRVFENVYS-DPGSPMMTRTSTGTNVI-AKIKKENDEQ 378 (752)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~~~l-~~~~~~~~~~-~~~~p~~~~s~dg~~l~-~~~~~~~~~~ 378 (752)
||||+.+++..+..+....|++++++++.. ....+ .+....+... .... .+|||||+.|+ +.+.+
T Consensus 268 spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~--p~fspDG~~l~~~~s~~----- 340 (740)
T 4a5s_A 268 ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE--PHFTLDGNSFYKIISNE----- 340 (740)
T ss_dssp EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC--CEECTTSSEEEEEEECT-----
T ss_pred eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC--ceEcCCCCEEEEEEEcC-----
Confidence 999998888776665667899999988520 01222 1212211110 0123 45899999998 55422
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEec--C-CCCcEEE
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYH 455 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~--~-~~~~~i~ 455 (752)
+| ..+||++|+++++.++|+..+.. +... +++|++.|+|.... . .....||
T Consensus 341 -------~G------~~~l~~~~~~~~~~~~lT~g~~~-----v~~~--------~~~d~~~i~f~~~~~~~~~~~~~ly 394 (740)
T 4a5s_A 341 -------EG------YRHICYFQIDKKDCTFITKGTWE-----VIGI--------EALTSDYLYYISNEYKGMPGGRNLY 394 (740)
T ss_dssp -------TS------CEEEEEEETTCSSCEESCCSSSC-----EEEE--------EEECSSEEEEEESCGGGCTTCBEEE
T ss_pred -------CC------ceEEEEEECCCCceEecccCCEE-----EEEE--------EEEeCCEEEEEEecCCCCCceeEEE
Confidence 22 35899999999999998876432 2222 33568899998754 2 3345799
Q ss_pred EEECCCCCee-Eee
Q 004456 456 ILSWPLKKSS-QIT 468 (752)
Q Consensus 456 ~~d~~~g~~~-~lt 468 (752)
++++.+++.+ +||
T Consensus 395 ~v~~~g~~~~~~lt 408 (740)
T 4a5s_A 395 KIQLIDYTKVTCLS 408 (740)
T ss_dssp EEETTEEEEEEESS
T ss_pred EEECCCCCcceeec
Confidence 9998876654 566
No 16
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.91 E-value=3.2e-23 Score=221.14 Aligned_cols=339 Identities=9% Similarity=0.042 Sum_probs=208.0
Q ss_pred CCceeecCCCCC---ceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEe
Q 004456 19 GPEKEVHGYPDG---AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWV 95 (752)
Q Consensus 19 g~~~~i~~~~~~---~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~ws 95 (752)
+..++++..... .....|+|||||++|||+... .+..+||++++++++.++++..... ....+.||
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~----~~~~~~~s 89 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGD----NTFGGFIS 89 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCB----CTTTCEEC
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCC----ccccceEC
Confidence 456777633221 126789999999999997642 3456899999999999999765431 12347999
Q ss_pred cCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc
Q 004456 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP 174 (752)
Q Consensus 96 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~ 174 (752)
|||+.|+|.... .+||++++ +|+.++++..
T Consensus 90 pdg~~l~~~~~~-------------------------------------------------~~l~~~d~~~~~~~~~~~~ 120 (396)
T 3c5m_A 90 TDERAFFYVKNE-------------------------------------------------LNLMKVDLETLEEQVIYTV 120 (396)
T ss_dssp TTSSEEEEEETT-------------------------------------------------TEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEEcC-------------------------------------------------CcEEEEECCCCCcEEEEec
Confidence 999999998431 36888888 4566655542
Q ss_pred -cc-eec-------------------cccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCC
Q 004456 175 -AV-YTA-------------------VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (752)
Q Consensus 175 -~~-~~~-------------------~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (752)
.. ... +.|||||+.|++..... ......|+++|+.+++.+.+......
T Consensus 121 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~--------~~~~~~l~~~d~~~g~~~~~~~~~~~--- 189 (396)
T 3c5m_A 121 DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH--------TNPTCRLIKVDIETGELEVIHQDTAW--- 189 (396)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH--------TCCCEEEEEEETTTCCEEEEEEESSC---
T ss_pred ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc--------CCCcceEEEEECCCCcEEeeccCCcc---
Confidence 11 111 45566665555432100 01125799999998877776633221
Q ss_pred CcccCCccccccceeeee-CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec--ccceeeeeeecCC
Q 004456 234 PVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDS 310 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~~~~~~~~~spDg 310 (752)
+..+.||| ||+. |+|++.. .. ......|+++++ +++..+.+... ...+..++|||||
T Consensus 190 ----------~~~~~~sp~dg~~-l~~~~~~--~~----~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg 249 (396)
T 3c5m_A 190 ----------LGHPIYRPFDDST-VGFCHEG--PH----DLVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDG 249 (396)
T ss_dssp ----------EEEEEEETTEEEE-EEEEECS--CS----SSCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTS
T ss_pred ----------cccceECCCCCCE-EEEEecC--CC----CCCCceEEEEEC---CCCceeEeeccCCCccccceEECCCC
Confidence 45789999 8987 8887531 11 012247889888 56666766653 2356778999999
Q ss_pred ceEEEeeeccc-CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCC-CCCeEEEeeeecCCcceEEEEccCCC
Q 004456 311 LALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGF 388 (752)
Q Consensus 311 ~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~ 388 (752)
+.|+|...... ....|+++++.++ +...+...... . ..||| ||++|++..... .+ .....+.
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~------~---~~~s~~dg~~l~~~~~~~----p~-~~~~~~~ 313 (396)
T 3c5m_A 250 SAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMPPC------S---HLMSNFDGSLMVGDGCDA----PV-DVADADS 313 (396)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECCSE------E---EEEECSSSSEEEEEECCC--------------
T ss_pred CEEEEEecCCCCccceEEEEECCCC--CeEEeeeCCCC------C---CCccCCCCceEEEecCCc----ce-eeccccc
Confidence 99999875432 2245999999874 34444432211 1 45899 999877754110 00 0000000
Q ss_pred CCCCCCCeeEEEecCCCceeEEeeccchhh--hhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 389 TPEGNIPFLDLFDINTGSKERIWESNREKY--FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 389 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
........|+++|+.+++.++|...... + +.. .. ......++|||||+.|+|..... ...+||++++.+++.+.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~-~~-~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKLCKHSTS-WDVLDG-DR-QITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHL 389 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEEEECCCC-CCCBTT-BS-STTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC--
T ss_pred cccCCCCcEEEEecccCceEEccCCCCc-cccccc-cc-cCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccccc
Confidence 0012335799999999988877654321 0 000 00 00122368999999999887654 46789999998877665
Q ss_pred ee
Q 004456 467 IT 468 (752)
Q Consensus 467 lt 468 (752)
+.
T Consensus 390 ~~ 391 (396)
T 3c5m_A 390 EH 391 (396)
T ss_dssp --
T ss_pred cc
Confidence 43
No 17
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=4.6e-23 Score=247.48 Aligned_cols=375 Identities=14% Similarity=0.035 Sum_probs=234.9
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+++++.+ |+.++++..+ ..+..|+|||||++|||++... ...+..+||++++++|+.++|+.+....
T Consensus 33 ~~l~~~~~~g----g~~~~lt~~~--~~v~~~~~SPDG~~la~~s~~~----~~~~~~~i~~~d~~~g~~~~lt~~~~~~ 102 (1045)
T 1k32_A 33 DDLWEHDLKS----GSTRKIVSNL--GVINNARFFPDGRKIAIRVMRG----SSLNTADLYFYNGENGEIKRITYFSGKS 102 (1045)
T ss_dssp TEEEEEETTT----CCEEEEECSS--SEEEEEEECTTSSEEEEEEEES----TTCCEEEEEEEETTTTEEEECCCCCEEE
T ss_pred CcEEEEECCC----CcEEEeeeCC--CcccCeEECCCCCEEEEEEeec----cCCCCCeEEEEECCCCCeEEcccCCCcc
Confidence 4789999988 9999998543 3589999999999999986521 0134579999999999999998765410
Q ss_pred --ccccccceEEecCCcEEEEEecCCCCC--CCCCcc--CCCCCceecccccc--------cc-----------------
Q 004456 85 --LNAVFGSFVWVNNSTLLIFTIPSSRRD--PPKKTM--VPLGPKIQSNEQKN--------II----------------- 133 (752)
Q Consensus 85 --~~~~~~~~~wspdg~~l~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~--------~~----------------- 133 (752)
-...+..++|||||+ |+|++...... ...... ...+.......... ..
T Consensus 103 ~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g 181 (1045)
T 1k32_A 103 TGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRG 181 (1045)
T ss_dssp ETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCS
T ss_pred cccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccC
Confidence 000026789999999 77765422110 000000 00000000000000 00
Q ss_pred --cccch-----------------hhccCChhhhhhhh--hhcccEEEEEccCC-CccccCCccceeccccCCCCceEEE
Q 004456 134 --ISRMT-----------------DNLLKDEYDESLFD--YYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLI 191 (752)
Q Consensus 134 --~~~~~-----------------~~~~~~~~d~~~~~--~~~~~~i~~~~~~G-~~~~l~~~~~~~~~~~SpDGk~l~~ 191 (752)
....+ .....++.+...+. ......||.++++| ..++++.+..+..++|||||++|++
T Consensus 182 ~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~ 261 (1045)
T 1k32_A 182 GTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILF 261 (1045)
T ss_dssp TTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEE
T ss_pred CCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEE
Confidence 00000 00011111210000 01235788888855 6777776655667899999999999
Q ss_pred EecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeee-eCCCceEEEEEeccCCCCcc
Q 004456 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDRGDANV 270 (752)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws-pDG~~~l~~~~~~~~~~~~~ 270 (752)
.. . ..|++|++.++....+...... ..+ ........+..++|| |||+. |++.+
T Consensus 262 ~~-~-------------~~i~~~d~~~~~l~~l~~~~~~-~~~-~~~~~~~~v~~~~~S~pdG~~-la~~~--------- 315 (1045)
T 1k32_A 262 SK-G-------------GSIYIFNPDTEKIEKIEIGDLE-SPE-DRIISIPSKFAEDFSPLDGDL-IAFVS--------- 315 (1045)
T ss_dssp EE-T-------------TEEEEECTTTCCEEECCCCCCC-BCC-SEEEECGGGGEEEEEECGGGC-EEEEE---------
T ss_pred Ee-C-------------CEEEEecCCceEeeeeccCccc-ccc-cccccccccceeeecCCCCCE-EEEEE---------
Confidence 74 2 3799999966655543331100 000 111112246789999 99998 88874
Q ss_pred ccCccceEEeccCCCCCCCCCeEEeeccc-ceeeeeeecCCceEEEeeecccCceeEE-EEcCCCCCccceecccccccc
Q 004456 271 EVSPRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLFDRVFEN 348 (752)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~-~~~~~~~~~~~~~l~~~~~~~ 348 (752)
++.++++++ .++....+..... .+..++|| ||+.|++.+. ...|| ++++.++ +...++. ....
T Consensus 316 ----~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~~-~~~~ 380 (1045)
T 1k32_A 316 ----RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFEE-NLGN 380 (1045)
T ss_dssp ----TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECCC-CCCS
T ss_pred ----cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEecC-Cccc
Confidence 337888888 5555566665555 77889999 9999999873 45799 9998874 4445542 1111
Q ss_pred ccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecC
Q 004456 349 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 428 (752)
Q Consensus 349 ~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~ 428 (752)
...++|||||++|++...+ ..|++||+++|+.+.+...... .
T Consensus 381 ------~~~~~~SpDG~~la~~~~~---------------------~~v~~~d~~tg~~~~~~~~~~~-----------~ 422 (1045)
T 1k32_A 381 ------VFAMGVDRNGKFAVVANDR---------------------FEIMTVDLETGKPTVIERSREA-----------M 422 (1045)
T ss_dssp ------EEEEEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSSS-----------C
T ss_pred ------eeeeEECCCCCEEEEECCC---------------------CeEEEEECCCCceEEeccCCCC-----------C
Confidence 1126799999999988622 2599999999998877643221 1
Q ss_pred CcceecccCCCEEEEEEecC------CCCcEEEEEECCCCCeeEeec
Q 004456 429 QGEEDINLNQLKILTSKESK------TEITQYHILSWPLKKSSQITN 469 (752)
Q Consensus 429 ~~~~~~s~d~~~l~~~~~~~------~~~~~i~~~d~~~g~~~~lt~ 469 (752)
...++|||||++|++..... .....|+++|+.+++...++.
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 23468999999999887643 345689999999888766664
No 18
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=1.1e-21 Score=227.55 Aligned_cols=330 Identities=13% Similarity=0.147 Sum_probs=213.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc------------------cc--ccccc
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC------------------LN--AVFGS 91 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~------------------~~--~~~~~ 91 (752)
.+..++|||||++|||++..+ .......||++++++++.++++...... .. ..+..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d----~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKD----SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCS----SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCceEecCCCEEEEEeccC----CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 578899999999999986411 0012358999999999988876543210 00 12568
Q ss_pred eEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC---C
Q 004456 92 FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T 167 (752)
Q Consensus 92 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G---~ 167 (752)
++|||||+.|+|.+. ..|+++++ +| +
T Consensus 114 ~~~SpDg~~l~~~~~--------------------------------------------------~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG--------------------------------------------------GELYLYDLKQEGKAA 143 (741)
T ss_dssp CEECTTSSEEEEEET--------------------------------------------------TEEEEEESSSCSTTS
T ss_pred eEECCCCCEEEEEeC--------------------------------------------------CcEEEEECCCCCcce
Confidence 899999999999732 47999999 66 6
Q ss_pred ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC---CCcccCCc-cc
Q 004456 168 AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED---IPVCYNSV-RE 242 (752)
Q Consensus 168 ~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~---~~~~~~~~-~~ 242 (752)
.++++.. ..+..++|||||++|+|.+.. +|++|++++++.++++....... .+.++... ..
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~~~--------------~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIRGR--------------NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEETT--------------EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEeCC--------------cEEEEecCCCCEEEeccCCccceeccccceeeeeccc
Confidence 7777766 778899999999999998632 79999999988877765432100 00000000 01
Q ss_pred cccceeeeeCCCceEEEEEeccCCCCc---------------------cccCccceEEeccCCCCCC-CCCeEEee---c
Q 004456 243 GMRSISWRADKPSTLYWVEAQDRGDAN---------------------VEVSPRDIIYTQPAEPAEG-EKPEILHK---L 297 (752)
Q Consensus 243 ~~~~~~wspDG~~~l~~~~~~~~~~~~---------------------~~~~~~~~l~~~~~~~~~~-~~~~~l~~---~ 297 (752)
.+..++|||||++ |++.+...+.... ........|+++|+ ++ ++...+.. .
T Consensus 210 ~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~ 285 (741)
T 2ecf_A 210 RHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKEQ 285 (741)
T ss_dssp CCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSCS
T ss_pred cccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCCc
Confidence 1467999999999 8887654321110 00112237889998 55 66665542 3
Q ss_pred ccceeeeeeecCCceEEEeee-cccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCC
Q 004456 298 DLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (752)
Q Consensus 298 ~~~~~~~~~spDg~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~ 376 (752)
...+..++| |||+.|++... .......|+++|+.++ +...+.......... ....++|||||+ +++.+..
T Consensus 286 ~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~~~--- 356 (741)
T 2ecf_A 286 DIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSSER--- 356 (741)
T ss_dssp SEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEECT---
T ss_pred ceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEecC---
Confidence 456788999 99999999874 3335678999999884 444444322211000 011256999999 5555421
Q ss_pred cceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCC-CcEEE
Q 004456 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE-ITQYH 455 (752)
Q Consensus 377 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~-~~~i~ 455 (752)
....+||.+|+.++ .+.|+..+.. +..+ ..|||||+.|+++...... ...||
T Consensus 357 ---------------~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 357 ---------------TGFQHLYRIDSKGK-AAALTHGNWS-----VDEL------LAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp ---------------TSSCEEEEECSSSC-EEESCCSSSC-----EEEE------EEEETTTTEEEEEECSSCTTCBEEE
T ss_pred ---------------CCccEEEEEcCCCC-eeeeeecceE-----EEeE------eEEeCCCCEEEEEEeCCCCceEEEE
Confidence 12347999998666 6656543321 1111 2589999999888754331 34588
Q ss_pred EEECCCCCeeEeec
Q 004456 456 ILSWPLKKSSQITN 469 (752)
Q Consensus 456 ~~d~~~g~~~~lt~ 469 (752)
.++..++..++|+.
T Consensus 410 ~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 410 AVPLQGGQPQRLSK 423 (741)
T ss_dssp EEETTCCCCEECCC
T ss_pred EEEcCCCCeeeccc
Confidence 88776666677764
No 19
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.5e-22 Score=199.76 Aligned_cols=219 Identities=18% Similarity=0.216 Sum_probs=164.9
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
.+..+.++++. +|..+.++++.|++. .++.|+||++||.+. .......++..|+++||.|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v 62 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLA 62 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEE
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEE
Confidence 35678899987 888999999999862 245899999999531 1111234667888999999
Q ss_pred EecCCCCCCCCCCCCCCc-------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004456 559 LAGPSIPIIGEGDKLPND-------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~-------------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~ 625 (752)
++++.+ |+|.+.... .......+|+.++++++.++. +|.++|+|+||||||.+++.++.++|+
T Consensus 63 ~~~d~~---g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~ 138 (241)
T 3f67_A 63 IAPELY---FRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ 138 (241)
T ss_dssp EEECTT---TTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT
T ss_pred EEeccc---ccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC
Confidence 996553 443221111 112456899999999999887 788899999999999999999999987
Q ss_pred ceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCC
Q 004456 626 LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 705 (752)
Q Consensus 626 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~ 705 (752)
++++|++.+........ +...+|...+.++++|+|+++|++|..+| +.+++.+++.+.+.+
T Consensus 139 -~~~~v~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~ 199 (241)
T 3f67_A 139 -LKAAVAWYGKLVGEKSL----------------NSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAAN 199 (241)
T ss_dssp -CCEEEEESCCCSCCCCS----------------SSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTT
T ss_pred -cceEEEEeccccCCCcc----------------CCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcC
Confidence 77777777653211100 11134555667788999999999999999 999999999999998
Q ss_pred CcEEEEEeCCCCccCCc-------cccHHHHHHHHHHHHHHH
Q 004456 706 ALSRLVLLPFEHHVYAA-------RENVMHVIWETDRWLQKY 740 (752)
Q Consensus 706 ~~~~~~~~~~~~H~~~~-------~~~~~~~~~~~~~fl~~~ 740 (752)
.+++++++++++|.+.. .+...+.++.+.+||++|
T Consensus 200 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 200 ATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp CSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999999998753 223456788899998764
No 20
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.90 E-value=8.5e-23 Score=206.21 Aligned_cols=238 Identities=15% Similarity=0.117 Sum_probs=169.3
Q ss_pred EEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCC
Q 004456 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (752)
Q Consensus 486 ~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (752)
++...+|..+.+++..|....+ .++.|+||++||+++..+. ......++..|+++||.|+++++
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~-- 81 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS------------QRESDPLALAFLAQGYQVLLLNY-- 81 (276)
T ss_dssp ECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC------------GGGSHHHHHHHHHTTCEEEEEEC--
T ss_pred cccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC------------chhhHHHHHHHHHCCCEEEEecC--
Confidence 4455677777776655543211 2458999999998644221 11123567788999999999554
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCC
Q 004456 566 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTL 641 (752)
Q Consensus 566 ~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~-~p~~~~~~v~~~~~~~~~~ 641 (752)
+|.|.+... ........|+.++++++.+.. .+|.++|+|+||||||++++.++.+ .+.+++++|+.+|..+...
T Consensus 82 -~g~g~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~ 159 (276)
T 3hxk_A 82 -TVMNKGTNY-NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTF 159 (276)
T ss_dssp -CCTTSCCCS-CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTS
T ss_pred -ccCCCcCCC-CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHh
Confidence 455543222 233467889999999999874 3788999999999999999999988 6789999999999876322
Q ss_pred CccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCC
Q 004456 642 TPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 721 (752)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 721 (752)
. +............ +. ...++...+.++.+|+|++||++|.++| +.++++++++++..+.+++++++++++|.+.
T Consensus 160 ~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 234 (276)
T 3hxk_A 160 G-WPSDLSHFNFEIE-NI-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHGVS 234 (276)
T ss_dssp S-CSSSSSSSCCCCS-CC-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTTCT
T ss_pred h-CCcchhhhhcCch-hh-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCCcc
Confidence 2 1100000000000 01 3446666777888999999999999999 9999999999999999999999999999876
Q ss_pred ccc------------cHHHHHHHHHHHHHHHhcCCCC
Q 004456 722 ARE------------NVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 722 ~~~------------~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
... ....+.+.+.+||+++....+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 271 (276)
T 3hxk_A 235 LANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLEH 271 (276)
T ss_dssp TCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC-
T ss_pred ccCccccccccccCchHHHHHHHHHHHHHhCcccccc
Confidence 432 3467889999999999866543
No 21
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.90 E-value=3.1e-22 Score=212.35 Aligned_cols=233 Identities=19% Similarity=0.185 Sum_probs=173.9
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
...++.+.++. +|..+++++++|++. ++.|+||++||.+.. ....+.....|+++||+|
T Consensus 124 ~~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~---------------~~~~~~~~~~l~~~G~~v 182 (386)
T 2jbw_A 124 SPPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLEST---------------KEESFQMENLVLDRGMAT 182 (386)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCC---------------TTTTHHHHHHHHHTTCEE
T ss_pred CCCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCcc---------------HHHHHHHHHHHHhCCCEE
Confidence 36789999987 889999999999872 358999999996311 111123467888999999
Q ss_pred EecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
++++ .+|+|.+............++.+++++|.+++.++.++|+|+|||+||++++.++.+ |++|+++|++ |+.+
T Consensus 183 ~~~d---~rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~ 257 (386)
T 2jbw_A 183 ATFD---GPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFS 257 (386)
T ss_dssp EEEC---CTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCS
T ss_pred EEEC---CCCCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCC
Confidence 9954 455555422111122334567889999999888888999999999999999999999 7899999999 8876
Q ss_pred CCCCccCcc----------ccccchhhhH-HHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHH-HhCCC
Q 004456 639 KTLTPFGFQ----------TEFRTLWEAT-NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL-KGHGA 706 (752)
Q Consensus 639 ~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l-~~~~~ 706 (752)
.......+. .....++... ..+...++...+.++++|+|+++|++|. || +.+++++++++ +.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~--- 331 (386)
T 2jbw_A 258 DLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE--- 331 (386)
T ss_dssp CSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---
T ss_pred hHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---
Confidence 432211000 0011223333 4556677777788899999999999999 98 89999998887 54
Q ss_pred cEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 707 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 707 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+++++++++++|.+ ......+.+.+.+||+++|+...
T Consensus 332 ~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~~ 368 (386)
T 2jbw_A 332 HLNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAGK 368 (386)
T ss_dssp GEEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSSC
T ss_pred CcEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCcC
Confidence 57999999999975 34567889999999999997653
No 22
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=3.8e-22 Score=230.79 Aligned_cols=339 Identities=11% Similarity=0.020 Sum_probs=209.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
....++|||||++++. +....|+++++++++.+++....... ...+..++|||||++|+|.+......
T Consensus 18 ~~~~~~~spdg~~~~~-----------~~dg~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-----------EQKGTVRLWNVETNTSTVLIEGKKIE-SLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSSSCBCCC-----------CSSSCEEEBCGGGCCCEEEECTTTTT-TTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred cccccEEcCCCcEEEE-----------eCCCCEEEEECCCCcEEEEecccccc-ccccceEEECCCCCEEEEEecCccce
Confidence 4677999999996533 22348999999999987776543210 00256889999999999985432111
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc----cceeccccCCCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP----AVYTAVEPSPDQ 186 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~----~~~~~~~~SpDG 186 (752)
. ......|+++++ +|+.++++.. ..+..++|||||
T Consensus 86 ~----------------------------------------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 86 Q----------------------------------------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp S----------------------------------------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred e----------------------------------------ecceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 0 001268999999 5676666654 237789999999
Q ss_pred ceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC----CCcccCCc--cccccceeeeeCCCceEEEE
Q 004456 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IPVCYNSV--REGMRSISWRADKPSTLYWV 260 (752)
Q Consensus 187 k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~~~~~~~--~~~~~~~~wspDG~~~l~~~ 260 (752)
++|+|.+.. +|++|++.+++.++++....... .+.+.... ......++|||||+. |++.
T Consensus 126 ~~la~~~~~--------------~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~ 190 (723)
T 1xfd_A 126 QQLIFIFEN--------------NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYA 190 (723)
T ss_dssp TCEEEEETT--------------EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEE
T ss_pred CEEEEEECC--------------eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE-EEEE
Confidence 999998752 79999999888777765432110 00000000 011357999999998 8887
Q ss_pred EeccCCCCc----------------------cccCccceEEeccCCCCCCCC-CeEEeec------ccceeeeeeecCCc
Q 004456 261 EAQDRGDAN----------------------VEVSPRDIIYTQPAEPAEGEK-PEILHKL------DLRFRSVSWCDDSL 311 (752)
Q Consensus 261 ~~~~~~~~~----------------------~~~~~~~~l~~~~~~~~~~~~-~~~l~~~------~~~~~~~~~spDg~ 311 (752)
+..+..... ........|+++|+ +++. ...+... ...+..++|||||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~---~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL---NGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES---SSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC---CCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 654321100 00112347899998 4454 3555533 45677899999999
Q ss_pred eEEEeeecccCceeEEEEcCCCCCccceeccccc-cccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCC
Q 004456 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 390 (752)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~ 390 (752)
.|++..........|+++++.++ +...+.... ...... ....++|||||++|++.+... +|.
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~-----------~~~-- 330 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLHR--QNEEPVFSKDGRKFFFIRAIP-----------QGG-- 330 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCCC--CCCCCEECTTSCSEEEEEEEC-----------CSS--
T ss_pred EEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEec--cCCCceEcCCCCeEEEEEecc-----------cCC--
Confidence 88776655445578999999884 333333221 111100 001256999999999873221 110
Q ss_pred CCCCCeeEEEe-cCCCc---eeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCC-CCcEEEEEECCCC-Ce
Q 004456 391 EGNIPFLDLFD-INTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYHILSWPLK-KS 464 (752)
Q Consensus 391 ~~~~~~l~~~d-~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~-~~~~i~~~d~~~g-~~ 464 (752)
.....+|+++| ..+++ .+.|+..... +.. .++|||||+.|+|...... ....||.++..++ +.
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~~~------~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 399 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWD-----VTK------ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNR 399 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSC-----EEE------EEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCC
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeE-----EEe------eeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCc
Confidence 11234799999 56666 5666533211 111 2479999999998865431 3446888876654 44
Q ss_pred eEee
Q 004456 465 SQIT 468 (752)
Q Consensus 465 ~~lt 468 (752)
+.|+
T Consensus 400 ~~l~ 403 (723)
T 1xfd_A 400 QCLS 403 (723)
T ss_dssp BCSS
T ss_pred ceec
Confidence 4454
No 23
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=4.6e-22 Score=212.93 Aligned_cols=254 Identities=17% Similarity=0.163 Sum_probs=184.7
Q ss_pred CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCC
Q 004456 41 DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (752)
Q Consensus 41 DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 120 (752)
.+++|||++... .......|+++|++++..+.++.+.. .+..++|||||+.|++.+...
T Consensus 142 ~~~~l~~~s~~~----~~~~~~~i~i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg~~la~~s~~~------------ 200 (415)
T 2hqs_A 142 FRTRIAYVVQTN----GGQFPYELRVSDYDGYNQFVVHRSPQ-----PLMSPAWSPDGSKLAYVTFES------------ 200 (415)
T ss_dssp TTCEEEEEEECS----SSSCCEEEEEEETTSCSCEEEEEESS-----CEEEEEECTTSSEEEEEECTT------------
T ss_pred CCCEEEEEEecC----CCCccceEEEEcCCCCCCEEEeCCCC-----cceeeEEcCCCCEEEEEEecC------------
Confidence 488999987521 00112799999999888888875543 467889999999999985421
Q ss_pred CCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cceeccccCCCCceEEEEecccCc
Q 004456 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPY 198 (752)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~ 198 (752)
....|+++|+ +|+.+++... ..+..++|||||++|+|......
T Consensus 201 ----------------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g- 245 (415)
T 2hqs_A 201 ----------------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG- 245 (415)
T ss_dssp ----------------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS-
T ss_pred ----------------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC-
Confidence 1158999999 6777777665 67889999999999998765421
Q ss_pred cccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceE
Q 004456 199 SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDII 278 (752)
Q Consensus 199 ~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l 278 (752)
...|++||+.+++.+.++..... +..++|||||+. |++.+..+ ....|
T Consensus 246 ---------~~~i~~~d~~~~~~~~l~~~~~~-------------~~~~~~spdg~~-l~~~s~~~---------g~~~i 293 (415)
T 2hqs_A 246 ---------SLNLYVMDLASGQIRQVTDGRSN-------------NTEPTWFPDSQN-LAFTSDQA---------GRPQV 293 (415)
T ss_dssp ---------SCEEEEEETTTCCEEECCCCSSC-------------EEEEEECTTSSE-EEEEECTT---------SSCEE
T ss_pred ---------CceEEEEECCCCCEEeCcCCCCc-------------ccceEECCCCCE-EEEEECCC---------CCcEE
Confidence 13699999998877776654322 557899999998 88876321 23379
Q ss_pred EeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCce
Q 004456 279 YTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM 358 (752)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~ 358 (752)
+++++ .++..+.++.....+..++|||||+.|++..... +...|+++++.++ +...++... .. ..+
T Consensus 294 ~~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~--~~~~l~~~~--~~------~~~ 359 (415)
T 2hqs_A 294 YKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATG--GVQVLSSTF--LD------ETP 359 (415)
T ss_dssp EEEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTC--CEEECCCSS--SC------EEE
T ss_pred EEEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCC--CEEEecCCC--Cc------CCe
Confidence 99998 5666677766666778899999999999987443 4568999999884 444554432 11 126
Q ss_pred eeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeecc
Q 004456 359 TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (752)
Q Consensus 359 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (752)
+|||||++|++.+.+. ....|++||++++..++|...+
T Consensus 360 ~~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 360 SLAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp EECTTSSEEEEEEEET------------------TEEEEEEEETTSCCEEECCCSS
T ss_pred EEcCCCCEEEEEEcCC------------------CccEEEEEECCCCcEEEeeCCC
Confidence 7999999999987441 2236999999877777775544
No 24
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.89 E-value=3.4e-22 Score=198.97 Aligned_cols=230 Identities=12% Similarity=0.086 Sum_probs=146.5
Q ss_pred CCCCeeEeecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCc
Q 004456 460 PLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 539 (752)
Q Consensus 460 ~~g~~~~lt~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~ 539 (752)
..|..+..+..+...........+.+++ ..||..|++++|+|++ .++.|+||++||++...
T Consensus 9 ~~~~~r~~~~~~~~~~~~~~~~e~~~~~-~~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~~------------- 69 (259)
T 4ao6_A 9 HHGSMRHQMSWNGKDERKLSVQERGFSL-EVDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTHK------------- 69 (259)
T ss_dssp --------CEECSCCEEETTEEEEEEEE-EETTEEEEEEEEEESS-----SCCSEEEEEEC-------------------
T ss_pred ccCcceeeeccCCCccccCCceEEEEEE-eeCCeEEEEEEEeCCC-----CCCCCEEEEeCCCcccc-------------
Confidence 3455444444432222112222333444 4699999999999986 34579999999975321
Q ss_pred cCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---------------------hhHHHHHHHHHHHHHHHHHcCC
Q 004456 540 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---------------------RFVEQLVSSAEAAVEEVVRRGV 598 (752)
Q Consensus 540 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---------------------~~~~~~~~d~~~~~~~l~~~~~ 598 (752)
........++.|+++||+|+++|. +|+|.+.... ......+.|..++++++...
T Consensus 70 ~~~~~~~~a~~la~~Gy~Vl~~D~---rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~-- 144 (259)
T 4ao6_A 70 KVEYIEQVAKLLVGRGISAMAIDG---PGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE-- 144 (259)
T ss_dssp --CHHHHHHHHHHHTTEEEEEECC---CC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--
T ss_pred cchHHHHHHHHHHHCCCeEEeecc---CCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--
Confidence 111123467789999999999554 4554331110 01223456788888888664
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEE
Q 004456 599 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI 678 (752)
Q Consensus 599 ~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li 678 (752)
+|.++|+++|+|+||++++.++...|. ++++|+..+..... . ..++...++++++|+|+
T Consensus 145 ~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~------------~--------~~~~~~~a~~i~~P~Li 203 (259)
T 4ao6_A 145 EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGV------------N--------GEDLVRLAPQVTCPVRY 203 (259)
T ss_dssp HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTST------------T--------HHHHHHHGGGCCSCEEE
T ss_pred cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccc------------c--------ccchhhhhccCCCCEEE
Confidence 578899999999999999999999875 67766655432110 0 11334456788999999
Q ss_pred EEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 679 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 679 ~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+||++|.+|| +++++++++++.. ....++++|+. |... ...+..+.+++||++||+
T Consensus 204 ~hG~~D~~vp--~~~~~~l~~al~~--~~k~l~~~~G~-H~~~---p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 204 LLQWDDELVS--LQSGLELFGKLGT--KQKTLHVNPGK-HSAV---PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEESSC-TTCC---CHHHHTHHHHHHHHHHCC
T ss_pred EecCCCCCCC--HHHHHHHHHHhCC--CCeEEEEeCCC-CCCc---CHHHHHHHHHHHHHHhcC
Confidence 9999999999 9999999998843 45678999874 5422 244677889999999985
No 25
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.89 E-value=2.8e-22 Score=202.47 Aligned_cols=237 Identities=15% Similarity=0.105 Sum_probs=163.9
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCC-CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~-~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
+..+.+++. .++..+.+.+|+|+.... ...++.|+||++|||++..+. .......+..|+++||.|
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v 68 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHS------------GREEAPIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCC------------CTTHHHHHHHHHHTTCEE
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCC------------CccchHHHHHHHHCCCEE
Confidence 346777774 567789999999973210 113458999999997653221 111224567888999999
Q ss_pred EecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC------------
Q 004456 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA------------ 623 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~------------ 623 (752)
+++++ +|+|.... .......|+.++++++.+.. .+|.++|+|+||||||++|+.++.+.
T Consensus 69 ~~~d~---~g~g~~~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 142 (277)
T 3bxp_A 69 VVLNY---QLIVGDQS---VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLD 142 (277)
T ss_dssp EEEEC---CCSTTTCC---CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCT
T ss_pred EEEec---ccCCCCCc---cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcc
Confidence 99554 44432111 23456788889999998763 36778999999999999999999985
Q ss_pred --CCceeEEEEccCCCCCCCCccCccccccchh-hhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHH
Q 004456 624 --PHLFCCGIARSGSYNKTLTPFGFQTEFRTLW-EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 700 (752)
Q Consensus 624 --p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 700 (752)
+.+++++|+++|..+.... +... .... .....+...++...+..+.+|+|++||++|.++| +.++++++++
T Consensus 143 ~~~~~~~~~v~~~p~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~ 216 (277)
T 3bxp_A 143 HYQGQHAAIILGYPVIDLTAG---FPTT-SAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQA 216 (277)
T ss_dssp TCCCCCSEEEEESCCCBTTSS---SSSS-HHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHH
T ss_pred cccCCcCEEEEeCCcccCCCC---CCCc-cccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHH
Confidence 6789999999998763321 1000 0000 0000122346666677778999999999999999 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCccCCccc--------------cHHHHHHHHHHHHHHHh
Q 004456 701 LKGHGALSRLVLLPFEHHVYAARE--------------NVMHVIWETDRWLQKYC 741 (752)
Q Consensus 701 l~~~~~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~~~~fl~~~l 741 (752)
++..+.+++++++++++|.+.... ....+++.+.+||.++.
T Consensus 217 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 217 MLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999999999999999765432 24678899999999874
No 26
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.89 E-value=3.4e-21 Score=191.09 Aligned_cols=217 Identities=18% Similarity=0.170 Sum_probs=163.3
Q ss_pred CceE--EEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcE
Q 004456 480 LQKE--MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (752)
Q Consensus 480 ~~~~--~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (752)
...| .+.+...+| .+.++++.|.+ .+.|+||++||.+...+. ........++..|+++||.
T Consensus 19 ~~~e~~~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~G~~ 81 (249)
T 2i3d_A 19 FQGHMPEVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGGT----------MNNQIVYQLFYLFQKRGFT 81 (249)
T ss_dssp -----CEEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTCC----------TTSHHHHHHHHHHHHTTCE
T ss_pred ccCceeEEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCCC----------ccchHHHHHHHHHHHCCCE
Confidence 3455 899998888 89999998864 237999999995321100 0001112456788899999
Q ss_pred EEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
|++++ .+|+|.+..........++|+.++++++.++. .+.++|+++|||+||.+++.++.+.|+ ++++|+++|..
T Consensus 82 v~~~d---~~g~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 156 (249)
T 2i3d_A 82 TLRFN---FRSIGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQP 156 (249)
T ss_dssp EEEEC---CTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCT
T ss_pred EEEEC---CCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCch
Confidence 99944 45666554432222334599999999999875 366799999999999999999999988 99999999875
Q ss_pred CCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEeCCC
Q 004456 638 NKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFE 716 (752)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 716 (752)
+... ...+.++++|+|+++|++|..+| ...++++++.+.. .+.++++++++++
T Consensus 157 ~~~~------------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~ 210 (249)
T 2i3d_A 157 NTYD------------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGA 210 (249)
T ss_dssp TTSC------------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTC
T ss_pred hhhh------------------------hhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCC
Confidence 4210 12345678999999999999999 9999999998875 4557899999999
Q ss_pred CccCCccccHHHHHHHHHHHHHHHhcCCCC
Q 004456 717 HHVYAARENVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 717 ~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
+|.+. +....+.+.+.+||++++.....
T Consensus 211 ~H~~~--~~~~~~~~~i~~fl~~~l~~~~~ 238 (249)
T 2i3d_A 211 NHFFN--GKVDELMGECEDYLDRRLNGELV 238 (249)
T ss_dssp CTTCT--TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred Ccccc--cCHHHHHHHHHHHHHHhcCCCCC
Confidence 99875 46788999999999999976554
No 27
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=2.2e-21 Score=206.36 Aligned_cols=310 Identities=9% Similarity=0.005 Sum_probs=204.0
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
..++|+...++++.++||..........+..++|||||+.|+|.+...
T Consensus 10 ~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------------------------- 57 (388)
T 3pe7_A 10 TFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD-------------------------------- 57 (388)
T ss_dssp CCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT--------------------------------
T ss_pred cceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC--------------------------------
Confidence 368898777788899998766432221223479999999999985421
Q ss_pred ccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-c-ceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~-~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
...+||++++ +|+.++++.. . ....+.|||||++|+|.... ..+++||+.
T Consensus 58 --------------g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~ 110 (388)
T 3pe7_A 58 --------------GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDLA 110 (388)
T ss_dssp --------------SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEETT
T ss_pred --------------CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 1158999999 5688888866 3 33478999999999999755 279999999
Q ss_pred CceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCC-CC---------ccccCccceEEeccCCCCC
Q 004456 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG-DA---------NVEVSPRDIIYTQPAEPAE 287 (752)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~-~~---------~~~~~~~~~l~~~~~~~~~ 287 (752)
+++.+.+...+.... ....+.++|||+. ++........ .+ .........|+++|+ +
T Consensus 111 ~g~~~~~~~~~~~~~----------~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~---~ 176 (388)
T 3pe7_A 111 TLEENVVYQVPAEWV----------GYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL---K 176 (388)
T ss_dssp TCCEEEEEECCTTEE----------EEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET---T
T ss_pred CCcceeeeechhhcc----------cccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEEC---C
Confidence 988777665442200 0112345899997 5544322110 00 001223468999998 6
Q ss_pred CCCCeEEeecccceeeeeeec-CCceEEEeeeccc--CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCC
Q 004456 288 GEKPEILHKLDLRFRSVSWCD-DSLALVNETWYKT--SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG 364 (752)
Q Consensus 288 ~~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg 364 (752)
+++.+.++.....+..++||| ||+.|+|...... ...+||++++++ ...+.++........ . .++|||||
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~---~--~~~~spdg 249 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESC---T--HEFWVPDG 249 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEE---E--EEEECTTS
T ss_pred CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCccc---c--cceECCCC
Confidence 677888887777788999999 9999999875321 245899999887 345566543321100 1 14699999
Q ss_pred CeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEE
Q 004456 365 TNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 444 (752)
Q Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~ 444 (752)
++|+|.+... + .....|++||+++|+.+.+...... ...........|||||+.|++.
T Consensus 250 ~~l~~~~~~~------------~----~~~~~l~~~d~~~g~~~~l~~~~~~------~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 250 SALVYVSYLK------------G----SPDRFIYSADPETLENRQLTSMPAC------SHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp SCEEEEEEET------------T----CCCEEEEEECTTTCCEEEEEEECCE------EEEEECTTSSEEEEEECCC---
T ss_pred CEEEEEecCC------------C----CCcceEEEEecCCCceEEEEcCCCc------eeeeecCCCCeEccCCCcceeE
Confidence 9999987431 1 1122499999999998887654321 1111112224799999999987
Q ss_pred Eec-----CCCCcEEEEEECCCCCeeEeecCCC
Q 004456 445 KES-----KTEITQYHILSWPLKKSSQITNFPH 472 (752)
Q Consensus 445 ~~~-----~~~~~~i~~~d~~~g~~~~lt~~~~ 472 (752)
... ......||++|+.+++.++|+....
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEECCC
T ss_pred eeeccccccCCCCEEEEEeccCCceEEeccccC
Confidence 543 1446689999999999998987654
No 28
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.89 E-value=1.3e-21 Score=204.78 Aligned_cols=245 Identities=14% Similarity=0.131 Sum_probs=164.8
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEe-CCCCC------------------CCCCCCceEEEEECCCCCcCcccCCcccCCCC
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN 538 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~-P~~~~------------------~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~ 538 (752)
..+..+.+.+...+| +.+.+|+ |+... ....++.|+||++||||+..+...
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~-------- 129 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSAS-------- 129 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTT--------
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCc--------
Confidence 446789999998887 7888887 87530 112346899999999976432211
Q ss_pred ccCCCCchhHHHHHhC-CcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChH
Q 004456 539 EFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYG 612 (752)
Q Consensus 539 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~----~~d~~-~i~l~G~S~G 612 (752)
...+..++..|+++ ||+|+.++++...+. .....++|+.++++|+.++. .+|++ ||+|+|+|+|
T Consensus 130 --~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 130 --STIYDSLCRRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp --BHHHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred --hhhHHHHHHHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 00012356677775 999999777643221 13456789999999999765 58898 9999999999
Q ss_pred HHHHHHHHHhCCC---ceeEEEEccCCCCCCCCccCccccccch---hhhHH-HHH------------hcChhh-hcCCC
Q 004456 613 AFMTAHLLAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFRTL---WEATN-VYI------------EMSPIT-HANKI 672 (752)
Q Consensus 613 G~~a~~~~~~~p~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~------------~~~~~~-~~~~~ 672 (752)
|++|+.++.+.++ .++++|+++|+++..............+ ..... .+. ..+|+. ....+
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987654 7999999999876432111000000000 00000 000 112221 22334
Q ss_pred C----CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc---cccHHHHHHHHHHHHHHHhcCCC
Q 004456 673 K----KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---RENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 673 ~----~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+ +|+||+||++|.+ ..++.+++++|++.|+++++++|++++|++.. .+...++++.+.+||+++++.+.
T Consensus 280 ~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp TTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred ccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 4 6999999999965 45678899999999999999999999998762 34567889999999999997754
Q ss_pred C
Q 004456 746 S 746 (752)
Q Consensus 746 ~ 746 (752)
.
T Consensus 356 ~ 356 (365)
T 3ebl_A 356 H 356 (365)
T ss_dssp -
T ss_pred c
Confidence 3
No 29
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=2.6e-21 Score=207.14 Aligned_cols=250 Identities=14% Similarity=0.094 Sum_probs=183.1
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+++++++ +..+.++... ..+..++|||||++|||++.. .+...|+++++++++.++++....
T Consensus 159 ~~i~i~d~~g----~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~~-------~~~~~i~~~d~~tg~~~~l~~~~~-- 223 (415)
T 2hqs_A 159 YELRVSDYDG----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPR-- 223 (415)
T ss_dssp EEEEEEETTS----CSCEEEEEES--SCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSS--
T ss_pred ceEEEEcCCC----CCCEEEeCCC--CcceeeEEcCCCCEEEEEEec-------CCCcEEEEEECCCCcEEEeecCCC--
Confidence 6789999877 7777777433 258899999999999998641 234799999999999888875543
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
.+..++|||||+.|+|+.... ....||++++
T Consensus 224 ---~~~~~~~spdg~~la~~~~~~----------------------------------------------g~~~i~~~d~ 254 (415)
T 2hqs_A 224 ---HNGAPAFSPDGSKLAFALSKT----------------------------------------------GSLNLYVMDL 254 (415)
T ss_dssp ---CEEEEEECTTSSEEEEEECTT----------------------------------------------SSCEEEEEET
T ss_pred ---cccCEEEcCCCCEEEEEEecC----------------------------------------------CCceEEEEEC
Confidence 356889999999999874311 1157999999
Q ss_pred -CCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccc
Q 004456 165 -DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (752)
Q Consensus 165 -~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (752)
+|+.++++.+ ..+..+.|||||++|++.+.... ...|++||+.+++.+.++....
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~~------------- 311 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEGS------------- 311 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSSS-------------
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCCC-------------
Confidence 6677778776 67889999999999999875421 1379999999887666554321
Q ss_pred cccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccC
Q 004456 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (752)
Q Consensus 243 ~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~ 322 (752)
.+..++|||||+. |++.+..+ ....|+++++ +++..+.+.... .+..++|||||+.|++.+... +
T Consensus 312 ~~~~~~~spdG~~-l~~~~~~~---------g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~-~ 376 (415)
T 2hqs_A 312 QNQDADVSSDGKF-MVMVSSNG---------GQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQG-M 376 (415)
T ss_dssp EEEEEEECTTSSE-EEEEEECS---------SCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEET-T
T ss_pred cccCeEECCCCCE-EEEEECcC---------CceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCC-C
Confidence 1457899999998 77776321 2347999998 566666666543 778899999999999987444 4
Q ss_pred ceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCC
Q 004456 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT 365 (752)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~ 365 (752)
...||++++++ .....++..... .. .++|||--.
T Consensus 377 ~~~l~~~d~~g--~~~~~l~~~~~~-v~------~~~~~~~~~ 410 (415)
T 2hqs_A 377 GSVLNLVSTDG--RFKARLPATDGQ-VK------FPAWSPYLH 410 (415)
T ss_dssp EEEEEEEETTS--CCEEECCCSSSE-EE------EEEECCCCC
T ss_pred ccEEEEEECCC--CcEEEeeCCCCC-Cc------CCccccccc
Confidence 56899999987 344555443211 11 156888654
No 30
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.88 E-value=3.4e-21 Score=199.29 Aligned_cols=235 Identities=13% Similarity=0.088 Sum_probs=165.7
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (752)
..+..+.+++++.+| .+.+.+|.|.+. +.|+||++|||+|..++ ... ....+..|++ .||
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~g~ 119 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILGN--------LDT----HDRIMRLLARYTGC 119 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSCC--------TTT----THHHHHHHHHHHCS
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccCC--------hhh----hHHHHHHHHHHcCC
Confidence 345669999998888 899999999752 24999999998754321 111 2245667777 899
Q ss_pred EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc------e
Q 004456 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------F 627 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~~------~ 627 (752)
+|++++++...+. .....++|+.++++|+.+.. .+|++||+|+|+|+||++|+.++.+.++. +
T Consensus 120 ~V~~~dyr~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 191 (326)
T 3ga7_A 120 TVIGIDYSLSPQA--------RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNV 191 (326)
T ss_dssp EEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEE
T ss_pred EEEEeeCCCCCCC--------CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCc
Confidence 9999777533221 12345689999999999874 47889999999999999999999887653 8
Q ss_pred eEEEEccCCCCCCCCccCccccc---cchhhhHH----HH-----HhcChhh-----hcCCCCCCEEEEEeCCCCCCCCC
Q 004456 628 CCGIARSGSYNKTLTPFGFQTEF---RTLWEATN----VY-----IEMSPIT-----HANKIKKPILIIHGEVDDKVGLF 690 (752)
Q Consensus 628 ~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~-----~~~~~~~-----~~~~~~~P~li~~G~~D~~v~~~ 690 (752)
+++|+++|+.+............ ........ .| ...++.. .+.+..+|+||+||+.|.++
T Consensus 192 ~~~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--- 268 (326)
T 3ga7_A 192 IAILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--- 268 (326)
T ss_dssp EEEEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH---
T ss_pred eEEEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH---
Confidence 99999999866432110000000 00000000 11 0112211 22334579999999999984
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc----ccHHHHHHHHHHHHHHHhcC
Q 004456 691 PMQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~ 743 (752)
.++.+++++|++.|.++++++|++++|++... +...++++.+.+||.++|+.
T Consensus 269 -~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 269 -DDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp -HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 57889999999999999999999999998533 23478899999999999865
No 31
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=225.38 Aligned_cols=331 Identities=10% Similarity=0.023 Sum_probs=201.9
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
...++|||||+ +++. .....||++++++|+.++++...... ...+..++|||||+.|+|.+.....
T Consensus 18 ~~~~~~s~dg~-~~~~----------~~d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~~~-- 83 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQ----------SADNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYSKL-- 83 (719)
T ss_dssp CCCCEESSSSE-EEEE----------CTTSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEEEC--
T ss_pred CCccEECCCCe-EEEE----------cCCCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCcee--
Confidence 34689999995 4443 22468999999999998887543210 0015688999999999998531100
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc---cccCCccceeccccCCCCce
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTPAVYTAVEPSPDQKY 188 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~---~~l~~~~~~~~~~~SpDGk~ 188 (752)
+.+.....|+++++ +|+. +++. ..+..++|||||++
T Consensus 84 --------------------------------------~~~s~~~~i~~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 84 --------------------------------------WRYSYTATYYIYDLSNGEFVRGNELP--RPIQYLCWSPVGSK 123 (719)
T ss_dssp --------------------------------------SSSCEEEEEEEEETTTTEECCSSCCC--SSBCCEEECSSTTC
T ss_pred --------------------------------------EEeecceEEEEEECCCCccccceecC--cccccceECCCCCE
Confidence 00012268999999 5566 5554 45778999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCC----CCCcccCCcc--ccccceeeeeCCCceEEEEEe
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE----DIPVCYNSVR--EGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~~~~~--~~~~~~~wspDG~~~l~~~~~ 262 (752)
|+|.+. .+|++|++.+++.++++...... +.+.++.... .....++|||||+. |++.+.
T Consensus 124 la~~~~--------------~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~ 188 (719)
T 1z68_A 124 LAYVYQ--------------NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEF 188 (719)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEE
T ss_pred EEEEEC--------------CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE-EEEEEE
Confidence 999852 27999999988877776433211 0110000000 11247999999998 888775
Q ss_pred ccCCCCcc----------------------ccCccceEEeccCCCCCCCCCe---EEe------ecccceeeeeeecCCc
Q 004456 263 QDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKPE---ILH------KLDLRFRSVSWCDDSL 311 (752)
Q Consensus 263 ~~~~~~~~----------------------~~~~~~~l~~~~~~~~~~~~~~---~l~------~~~~~~~~~~~spDg~ 311 (752)
.+...... .......|+++|+ +++... .+. .....+..++|||||+
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT---TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES---SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC---CCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 43221100 0112337888888 444331 332 2334568899999976
Q ss_pred eEEEeeecccCceeEEEEc----CCCCCccceeccc----cccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEE
Q 004456 312 ALVNETWYKTSQTRTWLVC----PGSKDVAPRVLFD----RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 383 (752)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~~----~~~~~~~~~~l~~----~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~ 383 (752)
.++...+......+||+++ +.++ +.+.+.. ........ .....++|||||+.|++.....
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~--------- 333 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTGWAGG-FFVSTPVFSYDAISYYKIFSDK--------- 333 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSSCSSS-SSCCCCEECTTSSCEEEEEECT---------
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCceEcc-ccCCccEECCCCCeEEEEEEcc---------
Confidence 4444333344556899999 7763 3444442 22111110 0000245999999988864321
Q ss_pred ccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEec--C-CCCcEEEEEECC
Q 004456 384 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYHILSWP 460 (752)
Q Consensus 384 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~--~-~~~~~i~~~d~~ 460 (752)
+ ...+|+++|+.+++.+.|+..... +.. +.++ |++.|+|+... . .....||.++.+
T Consensus 334 --~------g~~~l~~~~~~~~~~~~lt~~~~~-----v~~-------~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 334 --D------GYKHIHYIKDTVENAIQITSGKWE-----AIN-------IFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp --T------SCEEEEEESSCSTTCEECSCSSSC-----EEE-------EEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred --C------CceEEEEEECCCCceEecccCceE-----EEE-------EEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 1 234799999988887777644321 122 2445 89999998754 1 234578999886
Q ss_pred CC--CeeEee
Q 004456 461 LK--KSSQIT 468 (752)
Q Consensus 461 ~g--~~~~lt 468 (752)
++ +.+.|+
T Consensus 393 ~g~~~~~~l~ 402 (719)
T 1z68_A 393 SYPPSKKCVT 402 (719)
T ss_dssp SSSCCEEESS
T ss_pred CCCCCceecc
Confidence 66 345555
No 32
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.88 E-value=2.8e-21 Score=201.24 Aligned_cols=234 Identities=15% Similarity=0.168 Sum_probs=168.3
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (752)
...+.++.+++++.+|..+.++++.|++. .++.|+||++||+++.. . .......++++||
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~------------~----~~~~~~~l~~~G~ 122 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGR------------G----FPHDWLFWPSMGY 122 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCC------------C----CGGGGCHHHHTTC
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCC------------C----CchhhcchhhCCC
Confidence 34567999999988999999999999763 23589999999975321 0 1123446788999
Q ss_pred EEEecCCCCCCCCCCCC-----CC----------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Q 004456 557 AVLAGPSIPIIGEGDKL-----PN----------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGH 609 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~-----~~----------------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~ 609 (752)
+|++++++ |.|.+. .. .......+.|+.++++++.++..+|.++|+|+|+
T Consensus 123 ~v~~~d~r---G~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~ 199 (337)
T 1vlq_A 123 ICFVMDTR---GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGG 199 (337)
T ss_dssp EEEEECCT---TCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred EEEEecCC---CCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 99996554 444211 11 1123477899999999999988888899999999
Q ss_pred ChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc------Ccccc----ccchh---hhHHHHHhcChhhhcCCCCCCE
Q 004456 610 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF------GFQTE----FRTLW---EATNVYIEMSPITHANKIKKPI 676 (752)
Q Consensus 610 S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~------~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~P~ 676 (752)
|+||++++.++.+.| +++++|+.+|......... .+... ...+. .....+...++...+.++++|+
T Consensus 200 S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 278 (337)
T 1vlq_A 200 SQGGGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPA 278 (337)
T ss_dssp THHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCE
T ss_pred CHHHHHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCE
Confidence 999999999999998 5899999888644210000 00000 00000 0111223346777788899999
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 677 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 677 li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
|+++|+.|.++| +.++.+++++++. +++++++++++|.+. .....+.+.+||.++|..
T Consensus 279 lii~G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 279 LFSVGLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp EEEEETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC-
T ss_pred EEEeeCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHhc
Confidence 999999999999 9998888877653 589999999999864 335678899999999853
No 33
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.88 E-value=1.5e-21 Score=198.59 Aligned_cols=232 Identities=16% Similarity=0.128 Sum_probs=170.0
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
+..+.+.+.. +|..+.++++.|+ +.|+||++||++.. ...+..++..|+++||.|+
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~---------------~~~~~~~~~~l~~~g~~v~ 59 (290)
T 3ksr_A 4 AKLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS---------------QHHSLVRAREAVGLGCICM 59 (290)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC---------------TTTTHHHHHHHHTTTCEEE
T ss_pred CceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC---------------cCcHHHHHHHHHHCCCEEE
Confidence 4567788876 7789999999987 27999999996421 1122356778889999999
Q ss_pred ecCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 560 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
+ .+.+|+|.+... ........+|+.++++++.++..+|.++|+|+||||||++++.++.++| ++++++++|..
T Consensus 60 ~---~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~ 134 (290)
T 3ksr_A 60 T---FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPAL 134 (290)
T ss_dssp C---CCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCC
T ss_pred E---eecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcch
Confidence 9 445566655322 2245677899999999999988788889999999999999999999987 78888888865
Q ss_pred CCCCCccCccccccchhhhHHHH-------HhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEE
Q 004456 638 NKTLTPFGFQTEFRTLWEATNVY-------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 710 (752)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~ 710 (752)
.... .+..+............+ ...++...+.++++|+|++||+.|.++| ..+++.+++.+...+ ++++
T Consensus 135 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~ 210 (290)
T 3ksr_A 135 YKDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTS 210 (290)
T ss_dssp CCSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEE
T ss_pred hhhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceE
Confidence 4221 111110000000011111 1112333456688999999999999999 999999999887765 7899
Q ss_pred EEeCCCCccCCccccHHHHHHHHHHHHHHHhcCC
Q 004456 711 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 711 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 744 (752)
+++++++|.+...+....+.+.+.+||++++...
T Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 211 RVIAGADHALSVKEHQQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp EEETTCCTTCCSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEcCCCCCCCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 9999999987655667788899999999998754
No 34
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.87 E-value=8.5e-21 Score=188.47 Aligned_cols=227 Identities=18% Similarity=0.152 Sum_probs=159.5
Q ss_pred EEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCC
Q 004456 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 564 (752)
Q Consensus 485 ~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 564 (752)
+++. .+|.++.++++.|++. .++.|+||++||.+.. .....+..++..|+++||.|++ .
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~---~ 62 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLR---A 62 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC----CSSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEE---E
T ss_pred eEEe-cCCcEEEEEEEccCCC----CCCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEE---e
Confidence 4555 4788999999998752 1247999999996321 0011112456678889999999 5
Q ss_pred CCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-
Q 004456 565 PIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 641 (752)
Q Consensus 565 ~~~g~g~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~- 641 (752)
+.+|+|.+.... .......+|+.++++++.+...+ ++++|+||||||.+++.++.++|++++++|+++|......
T Consensus 63 D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp CCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 566777764432 23456788999999999765433 4899999999999999999999999999999998643100
Q ss_pred -----------CccCccccc---c---chhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhC
Q 004456 642 -----------TPFGFQTEF---R---TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 704 (752)
Q Consensus 642 -----------~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 704 (752)
.....+... . ............+....+.++++|+|++||++|..+| +..++++.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~--- 215 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQY--- 215 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHS---
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhC---
Confidence 000000000 0 0000011112233444566789999999999999999 88888777665
Q ss_pred CCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 705 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 705 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
.+.+++++++++|.+ .+.++.+.+.+.+||++++.
T Consensus 216 -~~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 216 -KNCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp -SSEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred -CCcEEEEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 357999999999987 67788899999999999875
No 35
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.87 E-value=3.6e-21 Score=207.29 Aligned_cols=232 Identities=13% Similarity=0.154 Sum_probs=158.8
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEe
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (752)
.++.+.+. ++ .+.+++++|++ .++.|+||++||++.. .....+..|+++||+|++
T Consensus 150 ~v~~~~~~--~g-~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-----------------~~~~~a~~La~~Gy~Vla 204 (446)
T 3hlk_A 150 GVRREPVR--VG-RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-----------------LLEYRASLLAGKGFAVMA 204 (446)
T ss_dssp TCEEEEEE--ET-TEEEEEEECSS-----SCCBCEEEEECCSSCS-----------------CCCHHHHHHHTTTCEEEE
T ss_pred CcEEEEec--CC-eEEEEEEeCCC-----CCCCCEEEEECCCCcc-----------------hhhHHHHHHHhCCCEEEE
Confidence 34555554 33 69999999976 3458999999996421 112457788999999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC
Q 004456 561 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 640 (752)
Q Consensus 561 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~ 640 (752)
++++ |++........ ..++|+.++++|+.++..+|.++|+|+||||||++|+.++.++|+ ++++|+++|.....
T Consensus 205 ~D~r---G~~~~~~~~~~--~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~ 278 (446)
T 3hlk_A 205 LAYY---NYEDLPKTMET--LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANV 278 (446)
T ss_dssp ECCS---SSTTSCSCCSE--EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCC
T ss_pred eccC---CCCCCCcchhh--CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCccccc
Confidence 6654 44443222111 126788899999999988888999999999999999999999987 89999998865321
Q ss_pred CCccCcc----------cc-----------ccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHH-HHHHH
Q 004456 641 LTPFGFQ----------TE-----------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFF 698 (752)
Q Consensus 641 ~~~~~~~----------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~~ 698 (752)
...+.+. .. ....+..............+.++++|+|++||++|.++| ..+ ++.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~ 356 (446)
T 3hlk_A 279 GGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEAC 356 (446)
T ss_dssp SSEEEETTEEECCCCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHH
T ss_pred CCCccccCccCCccccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHH
Confidence 1111000 00 000000000000111122356788999999999999998 744 47888
Q ss_pred HHHHhCCCc-EEEEEeCCCCccCC---------------------------ccccHHHHHHHHHHHHHHHhcCCC
Q 004456 699 DALKGHGAL-SRLVLLPFEHHVYA---------------------------ARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 699 ~~l~~~~~~-~~~~~~~~~~H~~~---------------------------~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+++++.+.+ +++++||+++|.+. ..+..+++.+.+.+||+++|+...
T Consensus 357 ~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~~ 431 (446)
T 3hlk_A 357 KRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHE 431 (446)
T ss_dssp HHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999998888 89999999999873 112256788999999999997654
No 36
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.87 E-value=1.4e-21 Score=192.13 Aligned_cols=208 Identities=15% Similarity=0.110 Sum_probs=157.6
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
.+.+++.+.+|..+.++++.|++ ++.|+||++||.+.. ......++..|+++||.|+++
T Consensus 3 ~~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~---------------~~~~~~~~~~l~~~g~~v~~~ 61 (236)
T 1zi8_A 3 TEGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGV---------------NAFMRETVSWLVDQGYAAVCP 61 (236)
T ss_dssp CTTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBS---------------CHHHHHHHHHHHHTTCEEEEE
T ss_pred cceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCC---------------CHHHHHHHHHHHhCCcEEEec
Confidence 34566777899999999999874 247999999996321 111224567888999999994
Q ss_pred CCCCCCCCCCCCCC-----------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004456 562 PSIPIIGEGDKLPN-----------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 624 (752)
Q Consensus 562 ~~~~~~g~g~~~~~-----------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p 624 (752)
+ .+|+|.+... ........+|+.++++++.++..++ .+|+++|||+||.+++.++.+.|
T Consensus 62 d---~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~ 137 (236)
T 1zi8_A 62 D---LYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY 137 (236)
T ss_dssp C---GGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC
T ss_pred c---ccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC
Confidence 4 4455543211 1123455789999999998876545 69999999999999999999997
Q ss_pred CceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhC
Q 004456 625 HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 704 (752)
Q Consensus 625 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 704 (752)
++++++++|.... ++...+.++++|+|+++|++|..+| ..+++++++.+...
T Consensus 138 --~~~~v~~~~~~~~------------------------~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~ 189 (236)
T 1zi8_A 138 --VDRAVGYYGVGLE------------------------KQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGAN 189 (236)
T ss_dssp --SSEEEEESCSSGG------------------------GCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTC
T ss_pred --ccEEEEecCcccc------------------------cchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhC
Confidence 8999988874210 1233456678999999999999999 99999999988765
Q ss_pred CCcEEEEEeCCCCccCCccc-------cHHHHHHHHHHHHHHHhcC
Q 004456 705 GALSRLVLLPFEHHVYAARE-------NVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 705 ~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~~~fl~~~l~~ 743 (752)
+ +++++++++++|.+.... ..+++.+.+.+||+++|..
T Consensus 190 ~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 190 P-LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp T-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred C-CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 5 789999999999876432 2357888999999999865
No 37
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.87 E-value=5.5e-22 Score=201.02 Aligned_cols=240 Identities=17% Similarity=0.075 Sum_probs=165.8
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCC-CCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCC
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~-~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 555 (752)
......+.+.+...++..+...+| |+... ....++.|+||++||+++..+. ...+..++..|+++|
T Consensus 14 ~~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~------------~~~~~~~~~~l~~~G 80 (283)
T 3bjr_A 14 NLYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIP------------VAQAESLAMAFAGHG 80 (283)
T ss_dssp ---CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCC------------HHHHHHHHHHHHTTT
T ss_pred ccCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCC------------ccccHHHHHHHHhCC
Confidence 344567788888888888888888 76421 0012458999999997643211 011124567888999
Q ss_pred cEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc------
Q 004456 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------ 626 (752)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~~------ 626 (752)
|.|+++++ +|.+.+. ........|+.++++++.+.. .+|.++|+|+||||||++|+.++.++|++
T Consensus 81 ~~v~~~d~---~g~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 154 (283)
T 3bjr_A 81 YQAFYLEY---TLLTDQQ---PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELN 154 (283)
T ss_dssp CEEEEEEC---CCTTTCS---SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHT
T ss_pred cEEEEEec---cCCCccc---cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcC
Confidence 99999554 4444321 012345678889999998753 46778999999999999999999999877
Q ss_pred -------eeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHH
Q 004456 627 -------FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 699 (752)
Q Consensus 627 -------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 699 (752)
++++|+.+|..+..... .............+...++...+.++.+|+|++||++|.++| +.+++++++
T Consensus 155 ~~~~~~~~~~~v~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~ 229 (283)
T 3bjr_A 155 VTPAMLKPNNVVLGYPVISPLLGF---PKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYAT 229 (283)
T ss_dssp CCHHHHCCSSEEEESCCCCTTSBC-----------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHH
T ss_pred CCcCCCCccEEEEcCCcccccccc---ccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHH
Confidence 89999999987532110 000000000000122345666677788999999999999999 999999999
Q ss_pred HHHhCCCcEEEEEeCCCCccCCccc------------cHHHHHHHHHHHHHHH
Q 004456 700 ALKGHGALSRLVLLPFEHHVYAARE------------NVMHVIWETDRWLQKY 740 (752)
Q Consensus 700 ~l~~~~~~~~~~~~~~~~H~~~~~~------------~~~~~~~~~~~fl~~~ 740 (752)
+++..+.+++++++++++|.+.... ....+++.+.+||+++
T Consensus 230 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 230 ALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 9999999999999999999765332 2357888899999864
No 38
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.87 E-value=1.9e-21 Score=208.55 Aligned_cols=232 Identities=18% Similarity=0.172 Sum_probs=160.1
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEe
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (752)
.++.+.+. ++ .+.++++.|++ .++.|+||++||++.. .....+..|+++||+|++
T Consensus 134 ~v~~~~~~--~~-~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a 188 (422)
T 3k2i_A 134 GVWRQSVR--AG-RVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLA 188 (422)
T ss_dssp TCEEEEEE--ET-TEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEE
T ss_pred CcEEEEEe--CC-cEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEE
Confidence 34555554 33 69999999986 3458999999996421 122457788999999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC
Q 004456 561 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 640 (752)
Q Consensus 561 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~ 640 (752)
++++ |+|....... ....+|+.+++++|.++..+|.++|+|+||||||++|+.++.++|+ ++++|+++|.....
T Consensus 189 ~D~r---G~g~~~~~~~--~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~ 262 (422)
T 3k2i_A 189 LAYY---NFEDLPNNMD--NISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISG 262 (422)
T ss_dssp EECS---SSTTSCSSCS--CEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCC
T ss_pred EccC---CCCCCCCCcc--cCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCccccc
Confidence 6554 4544322211 1226788899999999888888999999999999999999999987 89999988875321
Q ss_pred CCccCccc----------c-----------ccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHH-HHHH
Q 004456 641 LTPFGFQT----------E-----------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA-ERFF 698 (752)
Q Consensus 641 ~~~~~~~~----------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~-~~~~ 698 (752)
...+.+.. . ....+..............+.++++|+|++||++|.++| .... +.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~ 340 (422)
T 3k2i_A 263 NTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVS 340 (422)
T ss_dssp SSCEEETTEEECCCCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred CCchhhcCCcCCCcccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 11110000 0 000000000011112233456788999999999999998 7755 6888
Q ss_pred HHHHhCCCc-EEEEEeCCCCccCCc---------------------------cccHHHHHHHHHHHHHHHhcCCC
Q 004456 699 DALKGHGAL-SRLVLLPFEHHVYAA---------------------------RENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 699 ~~l~~~~~~-~~~~~~~~~~H~~~~---------------------------~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+++++.+.+ +++++||+++|.+.. .+..+++.+.+++||+++|+...
T Consensus 341 ~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~ 415 (422)
T 3k2i_A 341 ERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQ 415 (422)
T ss_dssp HHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 899998888 999999999999721 13456788999999999998654
No 39
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=4.8e-21 Score=200.19 Aligned_cols=228 Identities=14% Similarity=0.138 Sum_probs=165.1
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcE
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (752)
.....+.+.+.+.+|..+.++++.|++ .++.|+||++||++... ..+ .....++++||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~-----------~~~-----~~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNS-----------GDW-----NDKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCS-----------CCS-----GGGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCC-----------CCh-----hhhhHHHhCCcE
Confidence 456789999999999999999999986 34589999999975321 111 122367899999
Q ss_pred EEecCCCCCCCCCCCCC----------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 004456 558 VLAGPSIPIIGEGDKLP----------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 615 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~----------------------~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 615 (752)
|+++++ +|+|.+.. ...+....+.|+.++++++.....+|.+||+|+|||+||++
T Consensus 137 v~~~D~---rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~l 213 (346)
T 3fcy_A 137 VVAMDV---RGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGL 213 (346)
T ss_dssp EEEECC---TTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHH
T ss_pred EEEEcC---CCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHH
Confidence 999555 44443321 12234567899999999999988888899999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCCCCCCccCcc--cc---------------ccchhhhHHHHHhcChhhhcCCCCCCEEE
Q 004456 616 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ--TE---------------FRTLWEATNVYIEMSPITHANKIKKPILI 678 (752)
Q Consensus 616 a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~P~li 678 (752)
|+.++.++|+ ++++|+++|........+... .. ..........+...++...+.++++|+|+
T Consensus 214 a~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~li 292 (346)
T 3fcy_A 214 SLACAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLM 292 (346)
T ss_dssp HHHHHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEE
T ss_pred HHHHHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEE
Confidence 9999999987 999999998754110000000 00 00001111222334555667888999999
Q ss_pred EEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 679 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 679 ~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
++|+.|.++| +..+.++++++.. +++++++|+++|.+. ..+.+.+.+||.+.
T Consensus 293 i~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 293 CVGLMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp EEETTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred EeeCCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 9999999998 8887777765533 689999999999876 35677899999763
No 40
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.87 E-value=4.6e-21 Score=186.50 Aligned_cols=210 Identities=18% Similarity=0.183 Sum_probs=160.0
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcE
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (752)
..+..+.+.++. +|..+.++++.|++ +.|+||++||.+... ..+ .....+..|+++||.
T Consensus 8 ~~~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~-----------~~~--~~~~~~~~l~~~G~~ 66 (223)
T 2o2g_A 8 HQPQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR-----------YSP--RNRYVAEVLQQAGLA 66 (223)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT-----------TCH--HHHHHHHHHHHHTCE
T ss_pred CCceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC-----------Ccc--chHHHHHHHHHCCCE
Confidence 346788899886 88899999999875 379999999964211 111 012356688889999
Q ss_pred EEecCCCCCCCCCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004456 558 VLAGPSIPIIGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 631 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v 631 (752)
|++++ .+|+|.+.... .......+|+.++++++..+..+|.++++++|||+||.+++.++.++|++++++|
T Consensus 67 v~~~d---~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v 143 (223)
T 2o2g_A 67 TLLID---LLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVV 143 (223)
T ss_dssp EEEEC---SSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEE
T ss_pred EEEEc---CCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEE
Confidence 99944 44555432111 2345667899999999999888888999999999999999999999999999999
Q ss_pred EccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 004456 632 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 711 (752)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~ 711 (752)
+++|..+.. ...+.++++|+|+++|++|..+| ... .+.+.+.+.+++++
T Consensus 144 ~~~~~~~~~-------------------------~~~~~~~~~P~l~i~g~~D~~~~--~~~----~~~~~~~~~~~~~~ 192 (223)
T 2o2g_A 144 SRGGRPDLA-------------------------PSALPHVKAPTLLIVGGYDLPVI--AMN----EDALEQLQTSKRLV 192 (223)
T ss_dssp EESCCGGGC-------------------------TTTGGGCCSCEEEEEETTCHHHH--HHH----HHHHHHCCSSEEEE
T ss_pred EeCCCCCcC-------------------------HHHHhcCCCCEEEEEccccCCCC--HHH----HHHHHhhCCCeEEE
Confidence 999854311 12345578999999999998875 333 34555667789999
Q ss_pred EeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 712 LLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 712 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
++++++|.+...+....+.+.+.+||.++|+
T Consensus 193 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 193 IIPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp EETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred EeCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 9999999976556678899999999999873
No 41
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=9.2e-21 Score=195.43 Aligned_cols=231 Identities=14% Similarity=0.131 Sum_probs=164.6
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcE
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (752)
.....+.+++.+.+|..+.++++.|++ .++.|+||++||++.. + ...+.....++++||.
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~--------------~-~~~~~~~~~l~~~g~~ 111 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNAS--------------Y-DGEIHEMVNWALHGYA 111 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCC--------------S-GGGHHHHHHHHHTTCE
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCC--------------C-CCCcccccchhhCCcE
Confidence 445788899998889899999999976 2358999999997522 0 0011234477889999
Q ss_pred EEecCCCCCCCCCCCCCC--------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 004456 558 VLAGPSIPIIGEGDKLPN--------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 617 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~--------------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 617 (752)
|+++++ +|.|.+... ..++...+.|+.++++++.++..+|.++|+|+|||+||.+++
T Consensus 112 v~~~d~---rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 188 (318)
T 1l7a_A 112 TFGMLV---RGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTI 188 (318)
T ss_dssp EEEECC---TTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred EEEecC---CCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHH
Confidence 999655 444443221 112467789999999999998878889999999999999999
Q ss_pred HHHHhCCCceeEEEEccCCCCCCCCc------cCccccc-----c-chhhhH---HHHHhcChhhhcCCCCCCEEEEEeC
Q 004456 618 HLLAHAPHLFCCGIARSGSYNKTLTP------FGFQTEF-----R-TLWEAT---NVYIEMSPITHANKIKKPILIIHGE 682 (752)
Q Consensus 618 ~~~~~~p~~~~~~v~~~~~~~~~~~~------~~~~~~~-----~-~~~~~~---~~~~~~~~~~~~~~~~~P~li~~G~ 682 (752)
.++.++|+ ++++|+.+|........ ..+.... . ...... ......++...+.++++|+|+++|+
T Consensus 189 ~~a~~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~ 267 (318)
T 1l7a_A 189 AAAALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL 267 (318)
T ss_dssp HHHHHCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEET
T ss_pred HHhccCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEecc
Confidence 99999876 77888888754311000 0000000 0 000111 1122234666677889999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 683 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 683 ~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+|.++| +.++.++++++.. +++++++++++|.. .....+.+.+||.++|+
T Consensus 268 ~D~~~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 268 IDKVTP--PSTVFAAYNHLET---KKELKVYRYFGHEY-----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp TCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCSSC-----CHHHHHHHHHHHHHHHC
T ss_pred CCCCCC--cccHHHHHhhcCC---CeeEEEccCCCCCC-----cchhHHHHHHHHHHHhC
Confidence 999998 8888888776643 48999999999983 24568889999999985
No 42
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=5.7e-20 Score=186.92 Aligned_cols=264 Identities=12% Similarity=0.037 Sum_probs=184.8
Q ss_pred CcceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEccc-CcceeccCCC
Q 004456 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAKPLFESP 81 (752)
Q Consensus 3 ~~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~-g~~~~lt~~~ 81 (752)
....|+++++.. ++.+++.... ..+..++|||||++||+.. ...|+++++++ ++.++++...
T Consensus 20 ~~~~i~~~d~~~----~~~~~~~~~~--~~v~~~~~spdg~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRT----RKMRVVWQTP--ELFEAPNWSPDGKYLLLNS-----------EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CCEEEEEEETTT----TEEEEEEEES--SCCEEEEECTTSSEEEEEE-----------TTEEEEEESSSCCSCEECCCTT
T ss_pred cceeEEEEeCCC----CceeeeccCC--cceEeeEECCCCCEEEEEc-----------CCeEEEEeCCCCCCceEecccc
Confidence 346789999877 8777776432 3588999999999999953 35899999999 8888876443
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.. ..+..+.|||||+.|++...... ....||.
T Consensus 83 ~~---~~~~~~~~spdg~~l~~~~~~~~---------------------------------------------~~~~l~~ 114 (297)
T 2ojh_A 83 AT---ICNNDHGISPDGALYAISDKVEF---------------------------------------------GKSAIYL 114 (297)
T ss_dssp CC---CBCSCCEECTTSSEEEEEECTTT---------------------------------------------SSCEEEE
T ss_pred cc---ccccceEECCCCCEEEEEEeCCC---------------------------------------------CcceEEE
Confidence 21 13567899999999998753211 1168999
Q ss_pred Ecc-CCCccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCc
Q 004456 162 GSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (752)
Q Consensus 162 ~~~-~G~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (752)
+++ +++.+.+........+.|||||++|++...... ...||.+++.++..+.+......
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~~~---------- 174 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGEGR---------- 174 (297)
T ss_dssp EETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSSSC----------
T ss_pred EECCCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCCCc----------
Confidence 998 457677766655778899999999998765432 12566667777766666544322
Q ss_pred cccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecc
Q 004456 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (752)
Q Consensus 241 ~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 320 (752)
+..+.|+|||+. |++....+ ....++.++. .++....+......+..++|||||+.|++.....
T Consensus 175 ---~~~~~~s~dg~~-l~~~~~~~---------~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 175 ---NDGPDYSPDGRW-IYFNSSRT---------GQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp ---EEEEEECTTSSE-EEEEECTT---------SSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred ---cccceECCCCCE-EEEEecCC---------CCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 567999999997 77765321 3347788776 4556666766666778899999999999987543
Q ss_pred c-------CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeee
Q 004456 321 T-------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (752)
Q Consensus 321 ~-------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~ 373 (752)
. ....|+++++.++ +...+........ ....++|||||++|++...+
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGG--NVETLFDLFGGQG----TMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSC--SCEEEEEEEESTT----TSCSCCBCTTSSEEEEEEEC
T ss_pred CCCcccccCceEEEEEecCCC--CceeeeccCCCCc----ccccceECCCCCEEEEEEec
Confidence 2 2367999999884 3333432111100 11125699999999998744
No 43
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.86 E-value=1.5e-20 Score=198.59 Aligned_cols=226 Identities=18% Similarity=0.208 Sum_probs=163.6
Q ss_pred ceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
..+.+.|.+. +|..+.+.+++|+++.+. +++|+||++||+++.......+.... .+.. ...........|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~--~~~Pvvv~lHG~g~~~~~~~~~~~~~-~g~~--~~~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPD--RKYPLVVFLHGAGERGTDNYLQVAGN-RGAV--VWAQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTT--SCEEEEEEECCGGGCSSSSSHHHHSS-TTTT--GGGSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCCCCchhhhhhcc-ccce--eecCccccccCCEEEE
Confidence 4677888888 899999999999986543 35899999999864322111111000 0010 1112334457889999
Q ss_pred ecCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 560 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
+++.++..+++..... .......+.|+.++++++.++..+|++||+|+||||||++++.++.++|++|+++|+++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9766554444443221 1112355778889999999887788899999999999999999999999999999999996
Q ss_pred CCCCCCccCccccccchhhhHHHHHhcChhhhcCCCC-CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 004456 637 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 715 (752)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 715 (752)
.+. ..+..+. +|+|++||+.|..+| +.++++++++|++.+.++++++||+
T Consensus 298 ~~~---------------------------~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GDV---------------------------SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CCG---------------------------GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CCh---------------------------hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 421 1122333 899999999999999 9999999999999999999999999
Q ss_pred C---CccCCccccHHHHHH--HHHHHHHHH
Q 004456 716 E---HHVYAARENVMHVIW--ETDRWLQKY 740 (752)
Q Consensus 716 ~---~H~~~~~~~~~~~~~--~~~~fl~~~ 740 (752)
+ +|++.....+...+. .+.+||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 9 444443444555555 889999875
No 44
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.86 E-value=1.2e-20 Score=194.40 Aligned_cols=234 Identities=17% Similarity=0.085 Sum_probs=159.2
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (752)
..+.++.+.+ + .+.+++|.|++ .++.|+||++|||||..++. .. ...++..|+. .||
T Consensus 55 ~~~~~~~~~~---~--~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~~--------~~----~~~~~~~la~~~g~ 112 (322)
T 3fak_A 55 DDIQVEQVTV---A--GCAAEWVRAPG-----CQAGKAILYLHGGGYVMGSI--------NT----HRSMVGEISRASQA 112 (322)
T ss_dssp TTCEEEEEEE---T--TEEEEEEECTT-----CCTTCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTS
T ss_pred CCeeEEEEee---C--CeEEEEEeCCC-----CCCccEEEEEcCCccccCCh--------HH----HHHHHHHHHHhcCC
Confidence 3445555554 2 38999999976 23589999999987542211 11 1234556665 699
Q ss_pred EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 004456 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 632 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~v~ 632 (752)
+|++++++... +. .+...++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.++. ++++|+
T Consensus 113 ~vv~~dyr~~p---~~-----~~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl 183 (322)
T 3fak_A 113 AALLLDYRLAP---EH-----PFPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIP 183 (322)
T ss_dssp EEEEECCCCTT---TS-----CTTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred EEEEEeCCCCC---CC-----CCCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 99997765322 21 1345678999999999988 67899999999999999999999876553 899999
Q ss_pred ccCCCCCCCCccCcccc-------ccchhh-hHHHHH--------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHH
Q 004456 633 RSGSYNKTLTPFGFQTE-------FRTLWE-ATNVYI--------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 696 (752)
Q Consensus 633 ~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 696 (752)
++|+.+.......+... ...... ....|. ..+|+...-...+|+||+||+.|.+ ..++.+
T Consensus 184 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~ 259 (322)
T 3fak_A 184 ISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIK 259 (322)
T ss_dssp ESCCCCTTCCCTHHHHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHH
T ss_pred ECCEecCcCCCcCHHHhCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHH
Confidence 99988754321110000 000000 011111 1233322112236999999999976 567889
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCc----cccHHHHHHHHHHHHHHHhcCCCC
Q 004456 697 FFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
++++|++.|+++++++||+++|++.. .+...++++.+.+||.++|+....
T Consensus 260 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 313 (322)
T 3fak_A 260 LDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALAA 313 (322)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999998753 233578889999999999976543
No 45
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.86 E-value=1.8e-20 Score=180.33 Aligned_cols=204 Identities=16% Similarity=0.136 Sum_probs=149.8
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
+..+.+.+.+.+| .+.++++.|++ .++.|+||++||+++..+. ........++..|+++||.|+
T Consensus 4 ~~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~g~~v~ 67 (208)
T 3trd_A 4 MTNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGT----------MNNKVVTTLAKALDELGLKTV 67 (208)
T ss_dssp CSSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCC----------TTCHHHHHHHHHHHHTTCEEE
T ss_pred cccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCc----------cCCchHHHHHHHHHHCCCEEE
Confidence 3467788898899 99999999875 2347999999995321110 011111246678889999999
Q ss_pred ecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004456 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~ 639 (752)
++ +.+|+|.+...........+|+.++++++.++ .+.++|+++|||+||.+++.++ .+| +++++|+++|..+.
T Consensus 68 ~~---d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~ 140 (208)
T 3trd_A 68 RF---NFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY 140 (208)
T ss_dssp EE---CCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS
T ss_pred EE---ecCCCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc
Confidence 94 45566666444233456688999999999987 3458999999999999999999 666 89999999986521
Q ss_pred CCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCcc
Q 004456 640 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 719 (752)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 719 (752)
. ....+..+++|+|+++|++|..+| +.+++++++++.. .++++++++++|.
T Consensus 141 ~------------------------~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~H~ 191 (208)
T 3trd_A 141 E------------------------GFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISS---PVEFVVMSGASHF 191 (208)
T ss_dssp G------------------------GGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSS---CCEEEEETTCCSS
T ss_pred C------------------------CchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccC---ceEEEEeCCCCCc
Confidence 0 112234557999999999999999 8888888776543 3799999999998
Q ss_pred CCccccHHHHHHHHHHHH
Q 004456 720 YAARENVMHVIWETDRWL 737 (752)
Q Consensus 720 ~~~~~~~~~~~~~~~~fl 737 (752)
+... ..++.+.+.+||
T Consensus 192 ~~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 192 FHGR--LIELRELLVRNL 207 (208)
T ss_dssp CTTC--HHHHHHHHHHHH
T ss_pred cccc--HHHHHHHHHHHh
Confidence 7632 356666677776
No 46
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=8.8e-20 Score=190.74 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=195.1
Q ss_pred CceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 30 ~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
-..+..|++ ||++|||+...... .......+||++++++++.++| . .+..+.|||||+.|+|......
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~-~~~~~~~~l~~~d~~~~~~~~l---~------~~~~~~~SpDg~~la~~~~~~~ 81 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANL-KDNKYENTIVIENLKNNARRFI---E------NATMPRISPDGKKIAFMRANEE 81 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEET-TTTEEEEEEEEEETTTCCEEEE---E------SCEEEEECTTSSEEEEEEEETT
T ss_pred eEEcccceE--CCcEEEEEEeecCc-ccCCccceEEEEeCCCCceEEc---c------cCCCeEECCCCCEEEEEEeccC
Confidence 346788999 99999998752110 1113468899999999998888 1 3567899999999999854210
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCccceeccccCCCCce
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKY 188 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~~~~~~~~~SpDGk~ 188 (752)
. ...+||++++ +|+.++++....+..+.|||||++
T Consensus 82 ~--------------------------------------------~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~ 117 (347)
T 2gop_A 82 K--------------------------------------------KVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRK 117 (347)
T ss_dssp T--------------------------------------------TEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSE
T ss_pred C--------------------------------------------CcceEEEEECCCCceEEEEcCCCccceeECCCCCE
Confidence 0 1157999999 557777766522889999999999
Q ss_pred EEEEecccCcc--cc----cc---cc-----CccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 189 VLITSMHRPYS--YK----VP---CA-----RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 189 l~~~~~~~~~~--~~----~~---~~-----~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
|+|.+...+.. .. .+ .+ .....|+++++.+++. +.++. + . +..+.|||||
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~-------------~~~~~~spdg 182 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R-------------FSSGIWHRDK 182 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T-------------TCEEEEETTE
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C-------------cccccCCCCe
Confidence 99987541100 00 00 00 0125799999998877 66654 2 2 5578999999
Q ss_pred CceEEEEEeccCCCCccccCc-cceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeeccc----CceeEEE
Q 004456 254 PSTLYWVEAQDRGDANVEVSP-RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTWL 328 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~----~~~~l~~ 328 (752)
+++++..+.... ... ...|+.++ +++.+.++.. ..... +||||+.|+|.+.... ...+||+
T Consensus 183 ---~~~~~~~~~~~~---~~~~~~~l~~~d-----~~~~~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 183 ---IVVNVPHREIIP---QYFKFWDIYIWE-----DGKEEKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYI 248 (347)
T ss_dssp ---EEEEEECCCSSC---CSSCCEEEEEEE-----TTEEEEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEE
T ss_pred ---EEEEEecccccc---cccccccEEEeC-----CCceEEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEE
Confidence 344432221100 001 34678776 2456666655 44433 4999999999874331 3468999
Q ss_pred EcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCcee
Q 004456 329 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 408 (752)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 408 (752)
++ + ++.+.++....... .. .++|+ || +++.... ....+|| ++ +|+.+
T Consensus 249 ~d--~--~~~~~l~~~~~~~~----~~-~~~~s-dg--~~~~~~~------------------~~~~~l~-~~--~g~~~ 295 (347)
T 2gop_A 249 YD--G--KEVMGILDEVDRGV----GQ-AKIKD-GK--VYFTLFE------------------EGSVNLY-IW--DGEIK 295 (347)
T ss_dssp EC--S--SCEEESSTTCCSEE----EE-EEEET-TE--EEEEEEE------------------TTEEEEE-EE--SSSEE
T ss_pred EC--C--CceEeccccCCccc----CC-ccEEc-Cc--EEEEEec------------------CCcEEEE-Ec--CCceE
Confidence 99 3 34455543221110 00 14589 88 5555422 1233577 77 56666
Q ss_pred EEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCCCCC
Q 004456 409 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY 474 (752)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~ 474 (752)
.+...... +.. ++|++ .++++..+...|.+||.++ |+.++||..+..+
T Consensus 296 ~~~~~~~~-----v~~-------~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 296 PIAKGRHW-----IMG-------FDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp EEECSSSE-----EEE-------EEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred EEecCCCe-----EEe-------eeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 66544221 222 46777 5788888888888999998 7788899887543
No 47
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.86 E-value=1.2e-20 Score=190.70 Aligned_cols=202 Identities=17% Similarity=0.163 Sum_probs=142.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~ 590 (752)
.+.||++||.+ ++... +..++..|+++||.|++ .+.+|+|.+... .....+.++|+.+++
T Consensus 51 ~~~VlllHG~~-----------~s~~~----~~~la~~La~~Gy~Via---~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFT-----------GSPQS----MRFLAEGFARAGYTVAT---PRLTGHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTT-----------CCGGG----GHHHHHHHHHTTCEEEE---CCCTTSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCC-----------CCHHH----HHHHHHHHHHCCCEEEE---ECCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 56799999942 11111 23567889999999999 566788876321 223456688999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-----------ccCc-------cc----
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----------PFGF-------QT---- 648 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~-----------~~~~-------~~---- 648 (752)
++|.+.. ++++|+||||||.+++.++.++|++++++|+++|....... .... ..
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9997753 68999999999999999999999999999999987542110 0000 00
Q ss_pred ---cccchhhhHHHHHhc--ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc
Q 004456 649 ---EFRTLWEATNVYIEM--SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 723 (752)
Q Consensus 649 ---~~~~~~~~~~~~~~~--~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 723 (752)
....+......+... .....++++++|+|++||++|.++| +.+++.+++++. +.+++++++|++||.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIG--STEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCC--CSSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCC--CCCcEEEEECCCCCcCccc
Confidence 000111111111110 1123467889999999999999999 899888888764 3467999999999987655
Q ss_pred ccHHHHHHHHHHHHHHH
Q 004456 724 ENVMHVIWETDRWLQKY 740 (752)
Q Consensus 724 ~~~~~~~~~~~~fl~~~ 740 (752)
..++.+.+.+.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 56788999999999986
No 48
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.85 E-value=5.4e-21 Score=193.35 Aligned_cols=239 Identities=18% Similarity=0.171 Sum_probs=156.7
Q ss_pred CceEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~-~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
...+.+++.+ ..|..+.+.+|+|+++++. +++|+||++||++... ..+... ......+++.||.|
T Consensus 15 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~--~~~p~vv~lHG~~~~~-----------~~~~~~-~~~~~~~~~~g~~v 80 (280)
T 3i6y_A 15 GWHKQYSHVSNTLNCAMRFAIYLPPQASTG--AKVPVLYWLSGLTCSD-----------ENFMQK-AGAQRLAAELGIAI 80 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGGTT--CCEEEEEEECCTTCCS-----------SHHHHH-SCCHHHHHHHTCEE
T ss_pred CcEEEEEEeccccCCeeEEEEEeCCCCCCC--CCccEEEEecCCCCCh-----------hHHhhc-ccHHHHHhhCCeEE
Confidence 3466667665 4678999999999876433 3599999999975322 111110 01344566789999
Q ss_pred EecCCCCCCC------------CCCCCCC----c------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004456 559 LAGPSIPIIG------------EGDKLPN----D------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 616 (752)
Q Consensus 559 ~~~~~~~~~g------------~g~~~~~----~------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 616 (752)
+.++.+ .+| .|.+... . .+.....+ +++.++.+...+ ++||+|+||||||++|
T Consensus 81 v~pd~~-~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~i~l~G~S~GG~~a 155 (280)
T 3i6y_A 81 VAPDTS-PRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVN---ELPELIESMFPV-SDKRAIAGHSMGGHGA 155 (280)
T ss_dssp EEECSS-CCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHT---HHHHHHHHHSSE-EEEEEEEEETHHHHHH
T ss_pred EEeCCc-ccccccCcccccccccCccccccccCCCccchhhHHHHHHH---HHHHHHHHhCCC-CCCeEEEEECHHHHHH
Confidence 995532 111 1111100 0 11222223 444555554434 5799999999999999
Q ss_pred HHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCC--CCEEEEEeCCCCCCCCCHHH-
Q 004456 617 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQ- 693 (752)
Q Consensus 617 ~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~li~~G~~D~~v~~~~~~- 693 (752)
+.++.++|++|+++|+++|..+....++.........-.....+...++...+.+++ +|+|++||+.|.++| ...
T Consensus 156 ~~~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~ 233 (280)
T 3i6y_A 156 LTIALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLK 233 (280)
T ss_dssp HHHHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTC
T ss_pred HHHHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhh
Confidence 999999999999999999987643222110000000000111233445555555554 899999999999986 544
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 694 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
++++.+++++.+.+++++++|+++|.+. .+...++.+++|+.++|.
T Consensus 234 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 234 PEVLEAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 7899999999999999999999999853 356778889999999885
No 49
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.85 E-value=5.5e-20 Score=178.52 Aligned_cols=211 Identities=13% Similarity=0.134 Sum_probs=158.0
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
...+.+++++.+| .+.++++.|++..+ .+.|+||++||+++..+. ........++..|+++||.|+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGS----------MHNKVVTMAARALRELGITVV 73 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCS----------TTCHHHHHHHHHHHTTTCEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCc----------ccchHHHHHHHHHHHCCCeEE
Confidence 4678899998888 89999999976211 237999999996432110 011111245678889999999
Q ss_pred ecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004456 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~ 639 (752)
+++ .+|+|.+...........+|+.++++++.++. +.++|+++|||+||.+++.++.+. +++++|+++|....
T Consensus 74 ~~d---~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 74 RFN---FRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp EEC---CTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred EEe---cCCCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 944 45666654443344567899999999999874 567999999999999999999887 79999999987553
Q ss_pred CCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCcc
Q 004456 640 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 719 (752)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 719 (752)
.. ...+. ...|+|+++|++|..+| ...++++++++. .+++++++++++|.
T Consensus 147 ~~------------------------~~~~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~ 196 (220)
T 2fuk_A 147 WD------------------------FSDVQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHF 196 (220)
T ss_dssp BC------------------------CTTCC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTT
T ss_pred hh------------------------hhhcc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCce
Confidence 21 00111 25799999999999999 888877776653 45799999999998
Q ss_pred CCccccHHHHHHHHHHHHHHHhcC
Q 004456 720 YAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 720 ~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
+.. ....+.+.+.+||.++|..
T Consensus 197 ~~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 197 FHR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp CTT--CHHHHHHHHHHHHGGGCSS
T ss_pred ehh--hHHHHHHHHHHHHHHHhhc
Confidence 764 3667888999999999864
No 50
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.85 E-value=3.1e-20 Score=193.23 Aligned_cols=281 Identities=10% Similarity=0.025 Sum_probs=167.0
Q ss_pred CCCEEEEEEecCCCCcEEEEEECCCCCeeEeecCC-CC-CCC---cCCCceEEEEEEcCCCcEEEEEEEeCCCC-CCCCC
Q 004456 437 NQLKILTSKESKTEITQYHILSWPLKKSSQITNFP-HP-YPT---LASLQKEMIKYQRKDGVPLTATLYLPPGY-DQSKD 510 (752)
Q Consensus 437 d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~~-~~-~~~---~~~~~~~~~~~~~~~g~~~~~~l~~P~~~-~~~~~ 510 (752)
+...++|...+...+...++++. .|+..++...+ .+ .+. ...+..+.+.+.. +..+.+.+|+|+.. .+ .
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~ 80 (338)
T 2o7r_A 6 LETTGSSDPNTNLLKYLPIVLNP-DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--S 80 (338)
T ss_dssp ------------CTTTCSCEECT-TSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--S
T ss_pred CCCceeeccCcccccccceEECC-CCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--C
Confidence 34556665444444444445553 34444432111 11 111 1346688888875 45688889999763 11 2
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 589 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~ 589 (752)
++.|+||++|||++..+... . ..+..++..|+ +.||.|++++++ |.++. .....++|+.++
T Consensus 81 ~~~p~vv~~HGgg~~~~~~~--------~--~~~~~~~~~la~~~g~~vv~~d~r---g~~~~-----~~~~~~~d~~~~ 142 (338)
T 2o7r_A 81 AKLPLVVYFHGGGFILFSAA--------S--TIFHDFCCEMAVHAGVVIASVDYR---LAPEH-----RLPAAYDDAMEA 142 (338)
T ss_dssp CCEEEEEEECCSTTTSCCTT--------B--HHHHHHHHHHHHHHTCEEEEEECC---CTTTT-----CTTHHHHHHHHH
T ss_pred CCceEEEEEcCCcCcCCCCC--------c--hhHHHHHHHHHHHCCcEEEEecCC---CCCCC-----CCchHHHHHHHH
Confidence 35899999999875432111 0 00123566777 789999996654 43332 123567899999
Q ss_pred HHHHHHcC------CCCCCcEEEEEeChHHHHHHHHHHhCCC--------ceeEEEEccCCCCCCCCccC---ccc-ccc
Q 004456 590 VEEVVRRG------VADPSRIAVGGHSYGAFMTAHLLAHAPH--------LFCCGIARSGSYNKTLTPFG---FQT-EFR 651 (752)
Q Consensus 590 ~~~l~~~~------~~d~~~i~l~G~S~GG~~a~~~~~~~p~--------~~~~~v~~~~~~~~~~~~~~---~~~-~~~ 651 (752)
++|+.++. .+|.++++|+||||||++|+.++.++|+ +++++|+++|..+....... ... ...
T Consensus 143 ~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 222 (338)
T 2o7r_A 143 LQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRL 222 (338)
T ss_dssp HHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSS
T ss_pred HHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCccc
Confidence 99998763 2566899999999999999999999887 89999999997653211000 000 000
Q ss_pred chhhhHHHHHh------------cChh---------hhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEE
Q 004456 652 TLWEATNVYIE------------MSPI---------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 710 (752)
Q Consensus 652 ~~~~~~~~~~~------------~~~~---------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~ 710 (752)
........+.. .+++ ..+.++.+|+|+++|++|.+++ ++.+++++|++.+.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~----~~~~~~~~l~~~~~~~~~ 298 (338)
T 2o7r_A 223 PTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID----RQMELAERLEKKGVDVVA 298 (338)
T ss_dssp CHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH----HHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH----HHHHHHHHHHHCCCcEEE
Confidence 00000000000 0111 1222345699999999999864 457788999999999999
Q ss_pred EEeCCCCccCCcc--ccHHHHHHHHHHHHHHHhcCC
Q 004456 711 VLLPFEHHVYAAR--ENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 711 ~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~l~~~ 744 (752)
+++++++|.+... +....+.+.+.+||.++++..
T Consensus 299 ~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 334 (338)
T 2o7r_A 299 QFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTTK 334 (338)
T ss_dssp EEESSCCTTGGGTCHHHHHHHHHHHHHHHC------
T ss_pred EEECCCceEEeccChHHHHHHHHHHHHHHHhhcccc
Confidence 9999999987532 234788899999999988643
No 51
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2.2e-19 Score=206.90 Aligned_cols=313 Identities=14% Similarity=0.153 Sum_probs=197.3
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEccc-----CcceeccC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-----GEAKPLFE 79 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~-----g~~~~lt~ 79 (752)
..|+++++.. ++.++++... ..+..++|||||++|||+. ..+||++++++ ++.++++.
T Consensus 101 ~~i~~~d~~~----~~~~~l~~~~--~~~~~~~~SpdG~~la~~~-----------~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLA----RKVTYLFDTN--EETASLDFSPVGDRVAYVR-----------NHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTT----TEEEEEECCT--TCCTTCEECTTSSEEEEEE-----------TTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCC----CceEEccCCc--ccccCCcCCCCCCEEEEEE-----------CCeEEEEecCcccccCCCcEEecc
Confidence 5688999877 8877777432 3488899999999999953 26899999999 99998876
Q ss_pred CCCccc-c---------ccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhh
Q 004456 80 SPDICL-N---------AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (752)
Q Consensus 80 ~~~~~~-~---------~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (752)
...... + ..+..+.|||||+.|+|.+.+....... ...... .... ......++..+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~-~~~~~~------~~~~------~~~~~~y~~~g~ 230 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPT-PIVDYH------PLEA------ESKPLYYPMAGT 230 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCE-EEEECC------SSSC------EEEEECCCBTTS
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceE-EeeccC------CCCC------ceEEeeCCCCCC
Confidence 554211 0 0036789999999999986432221100 000000 0000 000111111110
Q ss_pred hhhhhcccEEEEEcc-CCCccccCC---c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCc-eeEE
Q 004456 150 LFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE 223 (752)
Q Consensus 150 ~~~~~~~~~i~~~~~-~G~~~~l~~---~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~ 223 (752)
.....+|+++|+ +|+.+++.. . ..+..++|||||++|++...+... ....+++||+.++ ..+.
T Consensus 231 ---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 231 ---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRT 299 (706)
T ss_dssp ---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEE
T ss_pred ---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeE
Confidence 012368999999 556555542 2 567799999999999997654321 1247899999887 5555
Q ss_pred ecCCCCCCCCCcccCCccccccceeeee--CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccce
Q 004456 224 LCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (752)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wsp--DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 301 (752)
+......... ..+..+.||| ||+. ++++..+ ....|+.++. +++..+.++.....+
T Consensus 300 ~~~~~~~~~~--------~~~~~~~~sp~~dg~~--l~~~~~~---------g~~~l~~~~~---~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 300 LFVETDKHYV--------EPLHPLTFLPGSNNQF--IWQSRRD---------GWNHLYLYDT---TGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEEECSSCC--------CCCSCCEECTTCSSEE--EEEECTT---------SSCEEEEEET---TSCEEEECCCSSSCE
T ss_pred EEEccCCCeE--------CccCCceeecCCCCEE--EEEEccC---------CccEEEEEEC---CCCEEEecCCCCeEE
Confidence 4422111000 0134679999 9984 4443221 2347888886 556667777666666
Q ss_pred ee-eeeecCCceEEEeeeccc-CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcce
Q 004456 302 RS-VSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (752)
Q Consensus 302 ~~-~~~spDg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~ 379 (752)
.. ++|||||+.|++....+. ....||.+++.++ ..+.++.... .-.++|||||++|++.....
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~--------~~~~~~spdg~~l~~~~~~~----- 422 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTPESG--------MHRTQLSPDGSAIIDIFQSP----- 422 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCCSSS--------EEEEEECTTSSEEEEEEECS-----
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccCCCc--------eEEEEECCCCCEEEEEecCC-----
Confidence 65 799999999999875432 2468999999874 3455542211 11267999999999886321
Q ss_pred EEEEccCCCCCCCCCCeeEEEecCCCce
Q 004456 380 YILLNGRGFTPEGNIPFLDLFDINTGSK 407 (752)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~ 407 (752)
.....|++||+++++.
T Consensus 423 ------------~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 423 ------------TVPRKVTVTNIGKGSH 438 (706)
T ss_dssp ------------SCSCEEEEEESSSCEE
T ss_pred ------------CCCcEEEEEECCCCeE
Confidence 2334699999988873
No 52
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.85 E-value=7.9e-21 Score=191.91 Aligned_cols=237 Identities=15% Similarity=0.117 Sum_probs=156.1
Q ss_pred CceEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~-~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
...+.+++.+ ..|..+.+.+|+|++.. .+++|+||++||++... ..+.... .....+.+.||.|
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~-----------~~~~~~~-~~~~~~~~~g~~v 77 (278)
T 3e4d_A 13 GMQGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTH-----------ANVMEKG-EYRRMASELGLVV 77 (278)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS-----------HHHHHHS-CCHHHHHHHTCEE
T ss_pred CcEEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCc-----------cchhhcc-cHHHHHhhCCeEE
Confidence 3455666644 46788999999998753 23589999999975321 1111000 1233445679999
Q ss_pred EecCCCCCCCCCCCCCCc-------------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHH
Q 004456 559 LAGPSIPIIGEGDKLPND-------------------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 613 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~-------------------------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG 613 (752)
++++. +|+|.+.... .+..... .++++++.+...+|+++|+|+||||||
T Consensus 78 v~~d~---~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~i~l~G~S~GG 151 (278)
T 3e4d_A 78 VCPDT---SPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVT---EELPALIGQHFRADMSRQSIFGHSMGG 151 (278)
T ss_dssp EECCS---SCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHH---THHHHHHHHHSCEEEEEEEEEEETHHH
T ss_pred EecCC---cccCcccccccccccccCCccccccCCcCcccchhhHHHHHH---HHHHHHHHhhcCCCcCCeEEEEEChHH
Confidence 99554 3443321110 1111222 245666766656777899999999999
Q ss_pred HHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCC--CCCEEEEEeCCCCCCCCCH
Q 004456 614 FMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI--KKPILIIHGEVDDKVGLFP 691 (752)
Q Consensus 614 ~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~li~~G~~D~~v~~~~ 691 (752)
++|+.++.++|+.|+++|+++|..+....++.........-.....+...++...+.++ .+|+|++||+.|.++| .
T Consensus 152 ~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~ 229 (278)
T 3e4d_A 152 HGAMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--K 229 (278)
T ss_dssp HHHHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--H
T ss_pred HHHHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--c
Confidence 99999999999999999999998764432222110000000011122334554444443 4699999999999976 4
Q ss_pred HH-HHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 692 MQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 692 ~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
.. ++++.+++++.+.+++++++|+++|.+. .+...++.+++|+.++|+
T Consensus 230 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 230 GLRPWLFEEAIKGTDIGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HTCTHHHHHHHTTSSCEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHcCCCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 22 6889999999999999999999999854 245678889999999874
No 53
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.85 E-value=2.7e-20 Score=196.37 Aligned_cols=237 Identities=17% Similarity=0.140 Sum_probs=165.1
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (752)
...+..+.+++.+.+|..+.++++.|++ .+ .++.|+||++||++... ..+ ...++..|+++||
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~~-----------~~~---~~~~~~~l~~~G~ 125 (367)
T 2hdw_A 63 SAKVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAVK-----------EQS---SGLYAQTMAERGF 125 (367)
T ss_dssp CTTEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCCT-----------TSH---HHHHHHHHHHTTC
T ss_pred CCCceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCcc-----------hhh---HHHHHHHHHHCCC
Confidence 3446788999999889999999999986 21 23589999999964211 111 1125678899999
Q ss_pred EEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEc
Q 004456 557 AVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~ 633 (752)
.|++++ .+|+|.+.... .......+|+.++++++.++..+|.++|+++|||+||.+++.++.++| +++++|++
T Consensus 126 ~v~~~d---~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~ 201 (367)
T 2hdw_A 126 VTLAFD---PSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTS 201 (367)
T ss_dssp EEEEEC---CTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEE
T ss_pred EEEEEC---CCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEe
Confidence 999954 45555543221 224677899999999999988788889999999999999999999997 58999999
Q ss_pred cCCCCC-----CCCc--------------------------cC----cc---cccc------------------------
Q 004456 634 SGSYNK-----TLTP--------------------------FG----FQ---TEFR------------------------ 651 (752)
Q Consensus 634 ~~~~~~-----~~~~--------------------------~~----~~---~~~~------------------------ 651 (752)
+|.... .... +. .+ ....
T Consensus 202 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (367)
T 2hdw_A 202 TMYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSG 281 (367)
T ss_dssp SCCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTT
T ss_pred ccccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCccccccc
Confidence 875210 0000 00 00 0000
Q ss_pred --chhhhHHHHHhcChhhhcCCCC-CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHH
Q 004456 652 --TLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 728 (752)
Q Consensus 652 --~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 728 (752)
........+...++...+.+++ +|+|++||++|. + +.++++++++ .+.+++++++++++|..........
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~ 354 (367)
T 2hdw_A 282 NAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRI 354 (367)
T ss_dssp CCCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTS
T ss_pred chhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhH
Confidence 0001122333445566677888 999999999998 6 7887777665 5678999999999997432221112
Q ss_pred HHHHHHHHHHHHh
Q 004456 729 VIWETDRWLQKYC 741 (752)
Q Consensus 729 ~~~~~~~fl~~~l 741 (752)
+.+.+.+||+++|
T Consensus 355 ~~~~i~~fl~~~l 367 (367)
T 2hdw_A 355 PFDRIAGFFDEHL 367 (367)
T ss_dssp CHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhC
Confidence 6788999999875
No 54
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.85 E-value=1.9e-19 Score=185.30 Aligned_cols=235 Identities=18% Similarity=0.108 Sum_probs=163.5
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (752)
..+.++.++++..++ .+.+.+|.|.+ .++.|+||++|||||..++ ... ...++..|++ .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g~--------~~~----~~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLGD--------IES----YDPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSCC--------TTT----THHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccCC--------hHH----HHHHHHHHHHhcCC
Confidence 456789999998777 89999999976 2347999999998754321 111 2245667775 499
Q ss_pred EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEEeChHHHHHHHHHHhCCCce---eEEE
Q 004456 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV-A-DPSRIAVGGHSYGAFMTAHLLAHAPHLF---CCGI 631 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~~~~~p~~~---~~~v 631 (752)
.|+++++ +|.++.. .....+|+.++++|+.+... . |.++|+|+|+||||++|+.++.+.|++. +++|
T Consensus 123 ~Vv~~Dy---rg~~~~~-----~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDY---RLAPENK-----FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECC---CCTTTSC-----TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecC---CCCCCCC-----CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 9999655 4554432 23457888999999988641 1 7889999999999999999999887665 8999
Q ss_pred EccCCCCCCCCccCcccc-ccchhh------hHHHHH---------hcChhhh-cCCCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 632 ARSGSYNKTLTPFGFQTE-FRTLWE------ATNVYI---------EMSPITH-ANKIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~---------~~~~~~~-~~~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
+++|..+.......+... ....+. ....|. ..+|+.. +..+ +|+||++|+.|.+ ..++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l----~~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPL----RDQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTT----HHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCcc----HHHH
Confidence 999987643211100000 000000 000110 1123322 2222 5999999999987 4577
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCcc----ccHHHHHHHHHHHHHHHhcC
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~ 743 (752)
.+++++++..+.+++++++++++|.+... +....+.+.+.+||.++|..
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 88999999999999999999999997642 34578889999999998853
No 55
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.85 E-value=2.1e-20 Score=192.08 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=165.3
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCC
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARR 555 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G 555 (752)
...+.++.+++++.+|..+.+.+|.|.+ ++.|+||++||||+..++. .. ....+..|+ +.|
T Consensus 55 ~~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~~--------~~----~~~~~~~la~~~g 116 (317)
T 3qh4_A 55 AAGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGNL--------DT----DHRQCLELARRAR 116 (317)
T ss_dssp HHCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCCT--------TT----THHHHHHHHHHHT
T ss_pred CCcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCCh--------HH----HHHHHHHHHHHcC
Confidence 3457789999999999899999999975 2489999999987543211 11 224566666 569
Q ss_pred cEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----cee
Q 004456 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 628 (752)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~p~----~~~ 628 (752)
|.|++++++...++ .....++|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .++
T Consensus 117 ~~vv~~dyr~~p~~--------~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~ 188 (317)
T 3qh4_A 117 CAVVSVDYRLAPEH--------PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVI 188 (317)
T ss_dssp SEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCC
T ss_pred CEEEEecCCCCCCC--------CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCee
Confidence 99999777533321 2245578899999999886 35788899999999999999999987544 489
Q ss_pred EEEEccCCCCCCCCccCccccccchhh------hHHHHHh-------cChhhhcCCCC--CCEEEEEeCCCCCCCCCHHH
Q 004456 629 CGIARSGSYNKTLTPFGFQTEFRTLWE------ATNVYIE-------MSPITHANKIK--KPILIIHGEVDDKVGLFPMQ 693 (752)
Q Consensus 629 ~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-------~~~~~~~~~~~--~P~li~~G~~D~~v~~~~~~ 693 (752)
++++++|+.+...............+. ....|.. .+|.. ...+. +|+||+||+.|.++ .+
T Consensus 189 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~l~~lpP~li~~G~~D~~~----~~ 263 (317)
T 3qh4_A 189 FQLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGR-RGQLAGLPATLITCGEIDPFR----DE 263 (317)
T ss_dssp EEEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGG-CSCCTTCCCEEEEEEEESTTH----HH
T ss_pred EEEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCc-ccccCCCCceeEEecCcCCCc----hh
Confidence 999999988754111000000000000 0111111 11211 11222 59999999999874 47
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCCc----cccHHHHHHHHHHHHHHHhc
Q 004456 694 AERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 742 (752)
+.+++++|++.+.++++++|++++|++.. .+...++++.+.+||.++|.
T Consensus 264 ~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 264 VLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 78899999999999999999999998642 24457889999999999985
No 56
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.84 E-value=1.2e-20 Score=190.92 Aligned_cols=239 Identities=16% Similarity=0.174 Sum_probs=156.2
Q ss_pred CceEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~-~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
...+.+++.+ ..|..+.+.+|+|+++++. +++|+||++||+++... .+... ......+.+.||.|
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~--~~~P~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~v 78 (280)
T 3ls2_A 13 GWHKQYTHSAVSTHCTMRFAVFLPPGASES--NKVPVLYWLSGLTCTDE-----------NFMQK-AGAFKKAAELGIAI 78 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECTTCBTT--BCEEEEEEECCTTCCSH-----------HHHHH-SCCHHHHHHHTCEE
T ss_pred ceEEEEEEechhcCCceEEEEEcCCCCCCC--CCcCEEEEeCCCCCChh-----------hhhcc-hhHHHHHhhCCeEE
Confidence 4566677765 4678899999999986533 35999999999753221 11100 01244566789999
Q ss_pred EecCCCCCCC------------CCCCCCC----------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004456 559 LAGPSIPIIG------------EGDKLPN----------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 616 (752)
Q Consensus 559 ~~~~~~~~~g------------~g~~~~~----------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 616 (752)
++++.. .+| .|.+... ..+.....+ +++.++.+...+ .++++|+||||||++|
T Consensus 79 v~~d~~-~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~-~~~~~l~G~S~GG~~a 153 (280)
T 3ls2_A 79 VAPDTS-PRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVN---ELPALIEQHFPV-TSTKAISGHSMGGHGA 153 (280)
T ss_dssp EECCSS-CCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHT---HHHHHHHHHSSE-EEEEEEEEBTHHHHHH
T ss_pred EEeCCc-ccccccccccccccccCCccccccccccccccccHHHHHHH---HHHHHHHhhCCC-CCCeEEEEECHHHHHH
Confidence 995532 111 1111100 012222333 334455544333 3799999999999999
Q ss_pred HHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCC----CCCEEEEEeCCCCCCCCCHH
Q 004456 617 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI----KKPILIIHGEVDDKVGLFPM 692 (752)
Q Consensus 617 ~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~P~li~~G~~D~~v~~~~~ 692 (752)
+.++.++|+.|+++++++|..+....++...............+...++...+.++ .+|+|++||+.|.+++ ..
T Consensus 154 ~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~ 231 (280)
T 3ls2_A 154 LMIALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQ 231 (280)
T ss_dssp HHHHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CC
T ss_pred HHHHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--Cc
Confidence 99999999999999999998764322211000000000011123344555555555 4599999999999998 53
Q ss_pred H-HHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 693 Q-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 693 ~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
. +++++++|++.+.+++++++|+++|.+. .+...++.+++|+.++|.
T Consensus 232 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 232 LKPQNLVAVAKQKDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHhCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 3 7889999999999999999999999854 255678889999999885
No 57
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.84 E-value=6.9e-21 Score=192.79 Aligned_cols=241 Identities=18% Similarity=0.166 Sum_probs=154.0
Q ss_pred ceEEEEEEc-CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~~~-~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
..+.+++.+ ..+..+.+.+|+|++... +++|+||++||+++... .+... ......++++||+|+
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~vv 79 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQ-----------NFISK-SGYHQSASEHGLVVI 79 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSH-----------HHHHH-SCCHHHHHHHTCEEE
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCcc-----------chhhc-chHHHHhhcCCeEEE
Confidence 344555543 467889999999987532 35999999999754321 11100 012456788999999
Q ss_pred ecCCCCCCCCCC-------------CCC---C-chhH---HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 004456 560 AGPSIPIIGEGD-------------KLP---N-DRFV---EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 619 (752)
Q Consensus 560 ~~~~~~~~g~g~-------------~~~---~-~~~~---~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 619 (752)
+++. ..+|.|. ... . ..+. ........++++++.+...+|++||+|+||||||++|+.+
T Consensus 80 ~~d~-~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 158 (282)
T 3fcx_A 80 APDT-SPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALIC 158 (282)
T ss_dssp EECS-CSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHH
T ss_pred Eecc-ccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHH
Confidence 9664 1122221 100 1 1110 1112223355566665555788999999999999999999
Q ss_pred HHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcC---CCCCCEEEEEeCCCCCCCCCHHH--H
Q 004456 620 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHAN---KIKKPILIIHGEVDDKVGLFPMQ--A 694 (752)
Q Consensus 620 ~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~P~li~~G~~D~~v~~~~~~--~ 694 (752)
+.++|+.|+++|+++|..+....++...............+...++...+. .+.+|+|++||+.|.++| ..+ +
T Consensus 159 a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~ 236 (282)
T 3fcx_A 159 ALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLP 236 (282)
T ss_dssp HHTSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCH
T ss_pred HHhCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhH
Confidence 999999999999999987643221110000000000011122334444333 347999999999999985 333 5
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+++.++|++.+.+++++++|+++|.+. .+..++.+.++|+.++|.
T Consensus 237 ~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 237 DNFIAACTEKKIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhhc
Confidence 688999999999999999999999854 355678888999999885
No 58
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=4.8e-19 Score=212.59 Aligned_cols=247 Identities=10% Similarity=-0.006 Sum_probs=175.3
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc--
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-- 83 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~-- 83 (752)
.||.+++.+ +..++++... ....+.|||||++|||.. ...||++++++++...+......
T Consensus 227 ~l~~~~~~g----~~~~~l~~~~---~~~~~~~SpDG~~la~~~-----------~~~i~~~d~~~~~l~~l~~~~~~~~ 288 (1045)
T 1k32_A 227 QIYSTDLDG----KDLRKHTSFT---DYYPRHLNTDGRRILFSK-----------GGSIYIFNPDTEKIEKIEIGDLESP 288 (1045)
T ss_dssp EEEEEETTS----CSCEECCCCC---SSCEEEEEESSSCEEEEE-----------TTEEEEECTTTCCEEECCCCCCCBC
T ss_pred EEEEEeCCC----CcceEecCCC---CcceeeEcCCCCEEEEEe-----------CCEEEEecCCceEeeeeccCccccc
Confidence 466666655 7777776432 356679999999999953 36899999866655554331100
Q ss_pred ----cccccccceEEe-cCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 84 ----CLNAVFGSFVWV-NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 84 ----~~~~~~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
.....+..+.|| |||+.|++.+. ..
T Consensus 289 ~~~~~~~~~v~~~~~S~pdG~~la~~~~--------------------------------------------------~~ 318 (1045)
T 1k32_A 289 EDRIISIPSKFAEDFSPLDGDLIAFVSR--------------------------------------------------GQ 318 (1045)
T ss_dssp CSEEEECGGGGEEEEEECGGGCEEEEET--------------------------------------------------TE
T ss_pred ccccccccccceeeecCCCCCEEEEEEc--------------------------------------------------CE
Confidence 001135688999 99999998741 57
Q ss_pred EEEEcc-CCCccccCCc-c-ceeccccCCCCceEEEEecccCccccccccCccccEE-EEecCCceeEEecCCCCCCCCC
Q 004456 159 LVLGSL-DGTAKDFGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQ-VWTTDGKLVRELCDLPPAEDIP 234 (752)
Q Consensus 159 i~~~~~-~G~~~~l~~~-~-~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~-~~d~~~~~~~~l~~~~~~~~~~ 234 (752)
|+++++ +|+..+++.. . .+..+.|| ||+.|++.+.. ..++ ++++.+++.+.+.....
T Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~-------------~~l~~~~d~~~~~~~~l~~~~~----- 379 (1045)
T 1k32_A 319 AFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTRE-------------GDFLGIYDYRTGKAEKFEENLG----- 379 (1045)
T ss_dssp EEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETT-------------EEEEEEEETTTCCEEECCCCCC-----
T ss_pred EEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECC-------------CceEEEEECCCCCceEecCCcc-----
Confidence 999999 5566667655 5 78899999 99999998652 3789 99999887777662221
Q ss_pred cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe-ecccceeeeeeecCCceE
Q 004456 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLAL 313 (752)
Q Consensus 235 ~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~~~spDg~~l 313 (752)
.+..++|||||+. |++.+ .+..++++|+ ++++...+. .....+..++|||||++|
T Consensus 380 --------~~~~~~~SpDG~~-la~~~------------~~~~v~~~d~---~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 380 --------NVFAMGVDRNGKF-AVVAN------------DRFEIMTVDL---ETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp --------SEEEEEECTTSSE-EEEEE------------TTSEEEEEET---TTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred --------ceeeeEECCCCCE-EEEEC------------CCCeEEEEEC---CCCceEEeccCCCCCccceEECCCCCeE
Confidence 2567899999998 77765 2347999998 566666665 445567889999999999
Q ss_pred EEeeecc------cCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 314 VNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 314 ~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
++..... .....|+++++.++ +...++...... ..++|||||++|++.+.
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g--~~~~l~~~~~~~-------~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGR--KIFAATTENSHD-------YAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTT--EEEECSCSSSBE-------EEEEECTTSCEEEEEES
T ss_pred EEEecCccccccCCCCCeEEEEECCCC--cEEEeeCCCccc-------CCceEcCCCCEEEEEec
Confidence 9987433 23468999999874 345555433211 12569999999998875
No 59
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.84 E-value=7.9e-20 Score=187.68 Aligned_cols=235 Identities=17% Similarity=0.184 Sum_probs=163.6
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC-Cc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~ 556 (752)
....++.+++++.+| .+.+.+|.|++. .++.|+||++|||||..+.. .. ...++..|+++ ||
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g~~--------~~----~~~~~~~la~~~g~ 106 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVGDL--------ET----HDPVCRVLAKDGRA 106 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSCCT--------TT----THHHHHHHHHHHTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccCCh--------hH----hHHHHHHHHHhcCC
Confidence 456788999998777 899999999763 23489999999987543211 11 22456677775 99
Q ss_pred EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeE
Q 004456 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 629 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~----~~~~ 629 (752)
.|++++++ |.++.. .....+|+.++++|+.+.. .+|.++|+|+||||||++|+.++.++|+ .+++
T Consensus 107 ~v~~~d~r---g~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~ 178 (310)
T 2hm7_A 107 VVFSVDYR---LAPEHK-----FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF 178 (310)
T ss_dssp EEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEeCCC---CCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceE
Confidence 99996654 444331 2345788999999998875 3677899999999999999999988765 6999
Q ss_pred EEEccCCCCCC--CCccCcccc-ccchhh------hHHHHH---------hcChhh--hcCCCCCCEEEEEeCCCCCCCC
Q 004456 630 GIARSGSYNKT--LTPFGFQTE-FRTLWE------ATNVYI---------EMSPIT--HANKIKKPILIIHGEVDDKVGL 689 (752)
Q Consensus 630 ~v~~~~~~~~~--~~~~~~~~~-~~~~~~------~~~~~~---------~~~~~~--~~~~~~~P~li~~G~~D~~v~~ 689 (752)
+|+++|..+.. .....+... ....+. ....+. ..+|.. .+..+ +|+|++||++|.+
T Consensus 179 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~--- 254 (310)
T 2hm7_A 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPL--- 254 (310)
T ss_dssp EEEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTT---
T ss_pred EEEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCc---
Confidence 99999987643 111000000 000000 000110 112222 12222 4999999999987
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc----cccHHHHHHHHHHHHHHHhc
Q 004456 690 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 742 (752)
..++..++++++..+.+++++++++++|.+.. .+...++.+.+.+||.++|+
T Consensus 255 -~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 255 -RDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp -HHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred -hHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 45778899999999999999999999998653 23456788999999999873
No 60
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.84 E-value=2.6e-19 Score=186.77 Aligned_cols=237 Identities=16% Similarity=0.161 Sum_probs=166.5
Q ss_pred CCCceEEE-EEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc
Q 004456 478 ASLQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (752)
Q Consensus 478 ~~~~~~~~-~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (752)
..+..+.+ .+...+|..+.+.++.|.+ .+.|+||++||.+... ..+..++..|+++||
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~---------------~~~~~~~~~l~~~g~ 88 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS---------------GRYEELARMLMGLDL 88 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG---------------GGGHHHHHHHHTTTE
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc---------------chHHHHHHHHHhCCC
Confidence 33455555 6778899999999998864 2379999999964221 122346778888999
Q ss_pred EEEecCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEc
Q 004456 557 AVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~ 633 (752)
.|++ .+.+|+|.+... .......++|+.++++++... .+..+|+|+|||+||++++.++.++|++++++|++
T Consensus 89 ~vi~---~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 163 (342)
T 3hju_A 89 LVFA---HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLI 163 (342)
T ss_dssp EEEE---ECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEE
T ss_pred eEEE---EcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEE
Confidence 9999 455677766432 234567789999999999887 34568999999999999999999999999999999
Q ss_pred cCCCCCCCCccCc---------------------ccc-ccchhhhHHHHH---------------------hcChhhhcC
Q 004456 634 SGSYNKTLTPFGF---------------------QTE-FRTLWEATNVYI---------------------EMSPITHAN 670 (752)
Q Consensus 634 ~~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~---------------------~~~~~~~~~ 670 (752)
+|........... ... ..........+. ..+....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 3hju_A 164 SPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALP 243 (342)
T ss_dssp SCCCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGG
T ss_pred CcccccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHH
Confidence 9875532110000 000 000000000000 001123467
Q ss_pred CCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccc--cHHHHHHHHHHHHHHHhcCC
Q 004456 671 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 671 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l~~~ 744 (752)
++++|+|+++|++|.++| ...++++++.+.. ..+++++++++||.+.... ...+.+..+++||++++...
T Consensus 244 ~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 244 KLTVPFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp GCCSCEEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hCCcCEEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 789999999999999999 8888888777642 3579999999999876432 24567788999999998654
No 61
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=1.6e-19 Score=192.45 Aligned_cols=305 Identities=14% Similarity=0.084 Sum_probs=192.1
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+++++.+ |+.++++... ......+.|||||++|||++. ..+||++++++++.++++..+.
T Consensus 60 ~~l~~~d~~~----~~~~~l~~~~-~~~~~~~~~spdg~~l~~~~~----------~~~l~~~d~~~~~~~~~~~~~~-- 122 (396)
T 3c5m_A 60 RNYYLLNLET----QQAVQLTEGK-GDNTFGGFISTDERAFFYVKN----------ELNLMKVDLETLEEQVIYTVDE-- 122 (396)
T ss_dssp CEEEEEETTT----TEEEECCCSS-CBCTTTCEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECCT--
T ss_pred ceEEEEECCC----CcEEEeecCC-CCccccceECCCCCEEEEEEc----------CCcEEEEECCCCCcEEEEeccc--
Confidence 3688888877 8888886322 111233899999999999753 2379999999999988875443
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhh------hcccE
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY------YTTAQ 158 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~ 158 (752)
.|+|+|+.|+|........ .......+++++..+.+ .....
T Consensus 123 --------~~~~~g~~l~~~~~~~~~~-------------------------~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 123 --------EWKGYGTWVANSDCTKLVG-------------------------IEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp --------TEEEEEEEEECTTSSEEEE-------------------------EEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred --------ccCCCCCEEEeccCCcccc-------------------------ccccccccCCCCcceeeeeeccCCCcce
Confidence 3999999999863210000 00001112333332222 13468
Q ss_pred EEEEcc-CCCccccCCc-cceeccccCC-CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCc
Q 004456 159 LVLGSL-DGTAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (752)
Q Consensus 159 i~~~~~-~G~~~~l~~~-~~~~~~~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (752)
|+++++ +|+.+.+... ..+..+.||| ||++|+|.+... .......|+++++++++.+.+......
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~-------~~~~~~~l~~~d~~~~~~~~l~~~~~~----- 237 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGP-------HDLVDARMWLVNEDGSNVRKIKEHAEG----- 237 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSC-------SSSCSCCCEEEETTSCCCEESSCCCTT-----
T ss_pred EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCC-------CCCCCceEEEEECCCCceeEeeccCCC-----
Confidence 999999 6677776655 6678999999 899999986422 111124799999988876666542100
Q ss_pred ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeec-CCceEE
Q 004456 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD-DSLALV 314 (752)
Q Consensus 236 ~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~sp-Dg~~l~ 314 (752)
..+..+.|||||+. |++.+...+. ....|+++|+ .++..+.+..... .. +.||| ||+.++
T Consensus 238 ------~~~~~~~~spdg~~-l~~~~~~~~~-------~~~~l~~~d~---~~g~~~~l~~~~~-~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 238 ------ESCTHEFWIPDGSA-MAYVSYFKGQ-------TDRVIYKANP---ETLENEEVMVMPP-CS-HLMSNFDGSLMV 298 (396)
T ss_dssp ------EEEEEEEECTTSSC-EEEEEEETTT-------CCEEEEEECT---TTCCEEEEEECCS-EE-EEEECSSSSEEE
T ss_pred ------ccccceEECCCCCE-EEEEecCCCC-------ccceEEEEEC---CCCCeEEeeeCCC-CC-CCccCCCCceEE
Confidence 12456899999998 8887643211 1235999998 5566666654433 22 89999 999887
Q ss_pred Eeeec------------ccCceeEEEEcCCCCCccceecccccccc-c---cCCCCCCceeeCCCCCeEEEeeeecCCcc
Q 004456 315 NETWY------------KTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V---YSDPGSPMMTRTSTGTNVIAKIKKENDEQ 378 (752)
Q Consensus 315 ~~~~~------------~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~---~~~~~~p~~~~s~dg~~l~~~~~~~~~~~ 378 (752)
+.... ......||++++.++ ..+.++...... . ........++|||||++|++.+..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~----- 371 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAK--SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF----- 371 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTT--BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-----
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccC--ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-----
Confidence 75421 113467999999874 344554433210 0 000001124589999999998732
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
.....||++|+.+++.+.+
T Consensus 372 -------------~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 372 -------------EGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp -------------TSSCEEEEEECCTTCC---
T ss_pred -------------CCCceEEEEEEcccccccc
Confidence 2345799999988876654
No 62
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.84 E-value=1.9e-19 Score=180.70 Aligned_cols=228 Identities=17% Similarity=0.131 Sum_probs=162.1
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEe
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (752)
..+.+.+. .+|..+.++++.|.+ .+.|+||++||.+... ....+..++..|+++||.|++
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-------------~~~~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTANR-------------NTSLLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCCT-------------TCHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCCc-------------cccHHHHHHHHHHhCCcEEEE
Confidence 45666665 578899999999875 1379999999964210 111122466788899999999
Q ss_pred cCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 561 GPSIPIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 561 ~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
.+.+|+|.+.... .......+|+.++++++.++.. .++++|+|||+||++++.++.++|++++++|+++|...
T Consensus 81 ---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 81 ---FDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155 (270)
T ss_dssp ---ECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTH
T ss_pred ---EccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccc
Confidence 4556777664432 2356778999999999988643 35899999999999999999999999999999998753
Q ss_pred CCC------------CccCccc----c-ccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHH
Q 004456 639 KTL------------TPFGFQT----E-FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 701 (752)
Q Consensus 639 ~~~------------~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 701 (752)
... .+..... . ..........+...+....+.++++|+|+++|++|.++| +..++++.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~ 233 (270)
T 3pfb_A 156 LKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIY 233 (270)
T ss_dssp HHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHC
T ss_pred cchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 110 0000000 0 000011122334445566778889999999999999998 88887776663
Q ss_pred HhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 702 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 702 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
..++++++++++|.+. .+....+.+.+.+||+++
T Consensus 234 ----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 234 ----QNSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp ----SSEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred ----CCCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 3579999999999876 566778888899998765
No 63
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.84 E-value=1.4e-19 Score=186.89 Aligned_cols=238 Identities=18% Similarity=0.158 Sum_probs=164.3
Q ss_pred CCCceEEEEEEcCCCc-EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CC
Q 004456 478 ASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RR 555 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~-~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G 555 (752)
..+..+.+++++.+|. .+.+.+|.|++. .++.|+||++||+++..+.. .. ....+..|++ .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g~~--------~~----~~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGTA--------ES----SDPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCCG--------GG----GHHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccCCh--------hh----hHHHHHHHHHhcC
Confidence 4567899999988886 799999999752 23589999999987532211 11 1235566776 59
Q ss_pred cEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----cee
Q 004456 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 628 (752)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~p~----~~~ 628 (752)
|.|+++++ +|.|++.. ....+|+.++++|+.+. ..+|+++|+|+||||||++|+.++.+.++ .++
T Consensus 111 ~~Vv~~d~---rg~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEY---RLAPETTF-----PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecC---CCCCCCCC-----CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 99999555 45555422 23467888999999874 23677899999999999999999988654 489
Q ss_pred EEEEccCCCCCCCCccCccc-cccchhh------hHHHHHh--------------cChhhhcCCCC--CCEEEEEeCCCC
Q 004456 629 CGIARSGSYNKTLTPFGFQT-EFRTLWE------ATNVYIE--------------MSPITHANKIK--KPILIIHGEVDD 685 (752)
Q Consensus 629 ~~v~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~--------------~~~~~~~~~~~--~P~li~~G~~D~ 685 (752)
++|+++|..+.......+.. .....+. ....|.. .+|+.. ..+. +|+||+||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 99999998764322100000 0000000 0011111 122221 1222 799999999998
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccc---cHHHHHHHHHHHHHHHhcCC
Q 004456 686 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 686 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~fl~~~l~~~ 744 (752)
+ ..++.+++++|++.+.+++++++++++|++.... ...++.+.+.+||.+++...
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 7 4577889999999999999999999999865322 25678899999999999754
No 64
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.83 E-value=7.9e-20 Score=187.99 Aligned_cols=233 Identities=17% Similarity=0.103 Sum_probs=161.3
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~ 557 (752)
....+.+++++.+| .+.+.+|.|++ .++.|+||++|||||..+. ... ...++..|++ .||.
T Consensus 48 ~~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~g~~ 109 (313)
T 2wir_A 48 IHRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVLGS--------VET----HDHVCRRLANLSGAV 109 (313)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTSCC--------TGG----GHHHHHHHHHHHCCE
T ss_pred CceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccCCC--------hHH----HHHHHHHHHHHcCCE
Confidence 35688899998777 89999999976 2347999999998753221 111 2245667776 5999
Q ss_pred EEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEE
Q 004456 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCG 630 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~ 630 (752)
|+++++ +|.|++.. .....|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.+.|++ ++++
T Consensus 110 v~~~d~---rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 181 (313)
T 2wir_A 110 VVSVDY---RLAPEHKF-----PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQ 181 (313)
T ss_dssp EEEEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEeec---CCCCCCCC-----CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEE
Confidence 999554 45555432 234678888899988753 36777999999999999999999987766 9999
Q ss_pred EEccCCCC-CCCCccCcccc---ccchhh------hHHHHH---------hcChhhh-cCCCCCCEEEEEeCCCCCCCCC
Q 004456 631 IARSGSYN-KTLTPFGFQTE---FRTLWE------ATNVYI---------EMSPITH-ANKIKKPILIIHGEVDDKVGLF 690 (752)
Q Consensus 631 v~~~~~~~-~~~~~~~~~~~---~~~~~~------~~~~~~---------~~~~~~~-~~~~~~P~li~~G~~D~~v~~~ 690 (752)
|+++|..+ .......+... ....+. ....|. ..+|+.. +.. .+|+|++||+.|.++
T Consensus 182 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~lii~G~~D~~~--- 257 (313)
T 2wir_A 182 VLIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSN-LPPALVITAEYDPLR--- 257 (313)
T ss_dssp EEESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTT-CCCEEEEEEEECTTH---
T ss_pred EEEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccC-CCcceEEEcCcCcCh---
Confidence 99999877 32111000000 000000 000110 1133311 122 269999999999874
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc----ccHHHHHHHHHHHHHHHhc
Q 004456 691 PMQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 742 (752)
.++..++++++..+.+++++++++++|.+... +...++.+.+.+||.++++
T Consensus 258 -~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 258 -DEGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp -HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred -HHHHHHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 56788999999999999999999999987532 3456888899999998764
No 65
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.83 E-value=2.8e-19 Score=178.72 Aligned_cols=206 Identities=16% Similarity=0.168 Sum_probs=154.9
Q ss_pred CceEEEEEEcC--CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcE
Q 004456 480 LQKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (752)
Q Consensus 480 ~~~~~~~~~~~--~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (752)
..++.+.++.. ++. ..+.+++|.... .++.|+||++||.+... . .+..++..|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~-~~~~l~~p~~~~---~~~~p~vv~~HG~~~~~-----------~----~~~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGF-GGGTIYYPTSTA---DGTFGAVVISPGFTAYQ-----------S----SIAWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSS-CCEEEEEESCCT---TCCEEEEEEECCTTCCG-----------G----GTTTHHHHHHTTTCE
T ss_pred CCccceEecceeccCC-CceeEEecCCCC---CCCCCEEEEeCCcCCCc-----------h----hHHHHHHHHHhCCCE
Confidence 45677777655 332 357788886521 23589999999964211 1 122467788899999
Q ss_pred EEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEc
Q 004456 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~ 633 (752)
|++++ .+|.|.+ ......|+.++++++.+ ...++.++|+|+||||||++++.++.++|+ ++++|++
T Consensus 84 v~~~d---~~g~g~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTID---TNTTLDQ------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEEC---CSSTTCC------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeC---CCCCCCC------CchhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 99954 4565543 23445788899999988 344667899999999999999999999987 8999999
Q ss_pred cCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHH-HHHHHHHHHhCCCcEEEEE
Q 004456 634 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVL 712 (752)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~~~~l~~~~~~~~~~~ 712 (752)
+|... ...+.++++|+|+++|++|..+| ... ++++++.+.. +.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~~-~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLPG-SLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSCT-TSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhhc-CCCceEEE
Confidence 88532 12245678999999999999998 887 8899888843 46789999
Q ss_pred eCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 713 LPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 713 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+++++|.+.. +....+.+.+.+||++++....
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~~ 235 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSDT 235 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCCG
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCch
Confidence 9999998763 3457889999999999997653
No 66
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.83 E-value=7.6e-19 Score=176.49 Aligned_cols=225 Identities=12% Similarity=0.107 Sum_probs=153.2
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
.+...+...+|..+.+.++.|.. .++.|+||++||+++..+. ...+....+..|++. |.|+++
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~-----------~~~~~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGK-----------ANDLSPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCC-----------TTCSCHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCc-----------hhhhHHHHHHHHHhC-ceEEee
Confidence 45677888899999999999875 2357999999997643211 111112445556666 999995
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004456 562 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 641 (752)
Q Consensus 562 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~ 641 (752)
++ +|.+.. ......+|+.++++++.+. ++.++++|+||||||++++.++.+ ++++++|+++|..+...
T Consensus 66 d~---~~~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SY---RLLPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CC---CCTTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred cc---ccCCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 54 354432 2456688999999999887 456899999999999999999999 68999999999875421
Q ss_pred CccCcc------------------------ccccchhhhHHH-------------HHhc-------C-hhhhcCCCCCCE
Q 004456 642 TPFGFQ------------------------TEFRTLWEATNV-------------YIEM-------S-PITHANKIKKPI 676 (752)
Q Consensus 642 ~~~~~~------------------------~~~~~~~~~~~~-------------~~~~-------~-~~~~~~~~~~P~ 676 (752)
...... ............ +... . ....+.+++ |+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 100000 000000000000 0000 0 011125566 99
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccH--HHHHHHHHHHHHHHhc
Q 004456 677 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCL 742 (752)
Q Consensus 677 li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l~ 742 (752)
|+++|++|..+| +.+++++++.+ ...+++++++++|.+...... .++.+.+.+||++++.
T Consensus 213 lii~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVP--VEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSC--THHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCC--hHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999998 88877776544 456899999999997755443 6889999999999874
No 67
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.83 E-value=6e-19 Score=184.38 Aligned_cols=238 Identities=13% Similarity=0.096 Sum_probs=161.1
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCC------------CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 545 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~------------~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~ 545 (752)
..+..+.+.+.. +..+.+.+|+|+.... ...++.|+||++|||++..+.. .. ..+.
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~--------~~--~~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSA--------NS--AIYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCT--------TB--HHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCC--------cc--hhHH
Confidence 445677888875 4568899999986420 1124589999999987532211 10 0012
Q ss_pred hhHHHHH-hCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChHHHHHHHH
Q 004456 546 TSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYGAFMTAHL 619 (752)
Q Consensus 546 ~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~ 619 (752)
.++..|+ ++||+|++++++ |.++. .....++|+.++++|+.++. .+|.+ ||+|+||||||++|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~r---g~~~~-----~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYR---RAPEN-----PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCC---CTTTS-----CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCC---CCCCC-----CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3566777 789999996654 33332 12356789999999998864 47888 99999999999999999
Q ss_pred HHhCCC---ceeEEEEccCCCCCCCCccCcccccc----chhhhHHHHHh------------cChh----hhcCCCCC-C
Q 004456 620 LAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFR----TLWEATNVYIE------------MSPI----THANKIKK-P 675 (752)
Q Consensus 620 ~~~~p~---~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------~~~~----~~~~~~~~-P 675 (752)
+.++|+ +++++|+++|..+............. ........+.. .+++ ..+.++++ |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999887 89999999998653221100000000 00000000111 1111 12334455 9
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc---cccHHHHHHHHHHHHHH
Q 004456 676 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---RENVMHVIWETDRWLQK 739 (752)
Q Consensus 676 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~fl~~ 739 (752)
+|+++|++|.++ .++.++++++++.+.+++++++++++|.+.. .+....+.+.+.+||++
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999999999875 3667889999999999999999999998764 25567888899999975
No 68
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.83 E-value=9.7e-20 Score=187.75 Aligned_cols=233 Identities=15% Similarity=0.121 Sum_probs=153.6
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCc
Q 004456 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (752)
.....+.+++ +|..+ ++|++. ....|+||++|||+|..++. .. ...++..|+. .||
T Consensus 56 ~~~~~~~~~~---~g~~~----~~p~~~----~~~~~~vv~~HGgg~~~g~~--------~~----~~~~~~~la~~~g~ 112 (322)
T 3k6k_A 56 EGVELTLTDL---GGVPC----IRQATD----GAGAAHILYFHGGGYISGSP--------ST----HLVLTTQLAKQSSA 112 (322)
T ss_dssp TTCEEEEEEE---TTEEE----EEEECT----TCCSCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTC
T ss_pred CCceEEEEEE---CCEeE----EecCCC----CCCCeEEEEEcCCcccCCCh--------HH----HHHHHHHHHHhcCC
Confidence 3455566655 56444 466552 11234499999987543211 11 1234556665 499
Q ss_pred EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 004456 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 632 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~v~ 632 (752)
+|++++++ +.++. .....++|+.++++|+.++ .+|.++|+|+|+|+||++|+.++.+.++. ++++|+
T Consensus 113 ~v~~~dyr---~~~~~-----~~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 183 (322)
T 3k6k_A 113 TLWSLDYR---LAPEN-----PFPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVM 183 (322)
T ss_dssp EEEEECCC---CTTTS-----CTTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred EEEEeeCC---CCCCC-----CCchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 99997765 33322 1235578999999999987 46889999999999999999999887654 899999
Q ss_pred ccCCCCCCCCccCcccc-ccchh-------hhHHHHH--------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHH
Q 004456 633 RSGSYNKTLTPFGFQTE-FRTLW-------EATNVYI--------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 696 (752)
Q Consensus 633 ~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 696 (752)
++|+.+........... ...++ .....|. ..+|+...-...+|+||+||++|.+ ..++.+
T Consensus 184 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~ 259 (322)
T 3k6k_A 184 LSPFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTT 259 (322)
T ss_dssp ESCCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHH
T ss_pred ecCCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHH
Confidence 99988754322111000 00000 0011111 1133332222347999999999976 568889
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCcc----ccHHHHHHHHHHHHHHHhcCCCC
Q 004456 697 FFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
+++++++.|+++++++||+++|.+... +...++++.+.+||.++|.....
T Consensus 260 ~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 313 (322)
T 3k6k_A 260 LAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLAA 313 (322)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999987542 33568899999999999976543
No 69
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.83 E-value=8.4e-19 Score=178.89 Aligned_cols=236 Identities=16% Similarity=0.164 Sum_probs=161.7
Q ss_pred CceEEE-EEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~-~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
+..+.+ .+...+|.++.+.++.|.+ .+.|+||++||.+... . .+..++..|+++||.|
T Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~-----------~----~~~~~~~~l~~~g~~v 72 (303)
T 3pe6_A 14 IPYQDLPHLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEHS-----------G----RYEELARMLMGLDLLV 72 (303)
T ss_dssp CBGGGSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------G----GGHHHHHHHHHTTEEE
T ss_pred cccCCCCeEecCCCeEEEEEEeccCC------CCCeEEEEECCCCchh-----------h----HHHHHHHHHHhCCCcE
Confidence 333444 6777899999999998864 1379999999964211 1 1234677888899999
Q ss_pred EecCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004456 559 LAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~ 635 (752)
++ .+.+|+|.+... .......++|+.++++++.... +..+++++|||+||.+++.++.++|++++++|+++|
T Consensus 73 ~~---~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 147 (303)
T 3pe6_A 73 FA---HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISP 147 (303)
T ss_dssp EE---ECCTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESC
T ss_pred EE---eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECc
Confidence 99 455677766432 2345677899999999998763 346899999999999999999999999999999998
Q ss_pred CCCCCCC-----------------c-cCc---ccc-ccchhhhHHHHH---------------------hcChhhhcCCC
Q 004456 636 SYNKTLT-----------------P-FGF---QTE-FRTLWEATNVYI---------------------EMSPITHANKI 672 (752)
Q Consensus 636 ~~~~~~~-----------------~-~~~---~~~-~~~~~~~~~~~~---------------------~~~~~~~~~~~ 672 (752)
....... . ... ... ..........+. .......+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 227 (303)
T 3pe6_A 148 LVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKL 227 (303)
T ss_dssp SSSBCHHHHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGC
T ss_pred cccCchhccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcC
Confidence 7542100 0 000 000 000000000000 00112346778
Q ss_pred CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccc--cHHHHHHHHHHHHHHHhcCCC
Q 004456 673 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 673 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l~~~~ 745 (752)
++|+|+++|++|..++ ...++++.+.+.. ..+++++++++||.+.... .....+..+.+||++++....
T Consensus 228 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 298 (303)
T 3pe6_A 228 TVPFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATAG 298 (303)
T ss_dssp CSCEEEEEETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC---
T ss_pred CCCEEEEeeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999 8888888776642 3579999999999876432 245677889999999986543
No 70
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.83 E-value=1.7e-19 Score=185.40 Aligned_cols=233 Identities=18% Similarity=0.142 Sum_probs=159.4
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC-CcE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFA 557 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~ 557 (752)
....+.+++++.+| .+.+.+|.|.+ ..+.|+||++||++|..++ ... +..++..|+++ ||.
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~g~~ 106 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVFGS--------IET----HDHICRRLSRLSDSV 106 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTSCC--------TGG----GHHHHHHHHHHHTCE
T ss_pred cceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccCCC--------hhh----hHHHHHHHHHhcCCE
Confidence 45788999998777 89999999976 2247999999998643211 111 22456677765 999
Q ss_pred EEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEE
Q 004456 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCG 630 (752)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~----~~~~~ 630 (752)
|+++++ +|.|++.. ....+|+.++++|+.+.. .+|+++|+|+|||+||++|+.++.++|+ .++++
T Consensus 107 v~~~d~---rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 178 (311)
T 2c7b_A 107 VVSVDY---RLAPEYKF-----PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQ 178 (311)
T ss_dssp EEEECC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEE
T ss_pred EEEecC---CCCCCCCC-----CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeE
Confidence 999554 45555422 235678889999998763 4677899999999999999999987765 48999
Q ss_pred EEccCCCCCCCCcc----Cccccccchhh--h----HHHHH---------hcChhh-hcCCCCCCEEEEEeCCCCCCCCC
Q 004456 631 IARSGSYNKTLTPF----GFQTEFRTLWE--A----TNVYI---------EMSPIT-HANKIKKPILIIHGEVDDKVGLF 690 (752)
Q Consensus 631 v~~~~~~~~~~~~~----~~~~~~~~~~~--~----~~~~~---------~~~~~~-~~~~~~~P~li~~G~~D~~v~~~ 690 (752)
|+++|..+...... .+.......+. . ...+. ..+|+. .+..+ +|+|+++|+.|.+++
T Consensus 179 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~-- 255 (311)
T 2c7b_A 179 VLIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRD-- 255 (311)
T ss_dssp EEESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--
T ss_pred EEECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCchH--
Confidence 99999876311000 00000000000 0 00110 112222 12233 499999999999854
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc----cccHHHHHHHHHHHHHHHhc
Q 004456 691 PMQAERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 742 (752)
+...+.++++..+.+++++++++++|.+.. .+....+.+.+.+||.+++.
T Consensus 256 --~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 256 --EGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 556788889999999999999999998753 23457888999999999985
No 71
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.83 E-value=1.4e-20 Score=192.59 Aligned_cols=228 Identities=14% Similarity=0.125 Sum_probs=154.6
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
...+.|. +..+...+|+|+.. .++.|+||++|||+|..+.. .. ...++..|+++||+|+++
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~--------~~----~~~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDM--------SM----SCSIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCG--------GG----SCTTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCCh--------hH----HHHHHHHHHhCCCEEEEe
Confidence 4445554 44577888888642 23589999999987643221 11 124577889999999996
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCC-------CceeEEEEc
Q 004456 562 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAP-------HLFCCGIAR 633 (752)
Q Consensus 562 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~p-------~~~~~~v~~ 633 (752)
+++ +.+.. .......|+.++++|+.+. ..++.++|+|+||||||++|+.++.+.+ ++++++|++
T Consensus 119 d~r---~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~ 190 (303)
T 4e15_A 119 DYN---LCPQV-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190 (303)
T ss_dssp CCC---CTTTS-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEE
T ss_pred cCC---CCCCC-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEE
Confidence 654 43332 2456788999999999873 2345789999999999999999998653 279999999
Q ss_pred cCCCCCCCCccCc-cccccchhhhHHHHHhcChh-hhcCCC----CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 004456 634 SGSYNKTLTPFGF-QTEFRTLWEATNVYIEMSPI-THANKI----KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 707 (752)
Q Consensus 634 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~ 707 (752)
+|.++........ ...........+.+...+|+ ..+..+ .+|+|++||++|..|| ..+++++++++++.|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 191 CGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYK 268 (303)
T ss_dssp SCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCC
T ss_pred eeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCc
Confidence 9987742111100 00000011112223445665 455544 8999999999999998 99999999999999999
Q ss_pred EEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 708 SRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 708 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++++++++++|. ...+........+.+||.+
T Consensus 269 ~~~~~~~g~~H~-~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 269 ASFTLFKGYDHF-DIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp EEEEEEEEEETT-HHHHGGGSTTSHHHHHHHH
T ss_pred eEEEEeCCCCch-HHHHHHhCCCcHHHHHHHH
Confidence 999999999994 3233333333445555543
No 72
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.82 E-value=2.8e-19 Score=199.63 Aligned_cols=249 Identities=16% Similarity=0.198 Sum_probs=170.6
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH---HHHHhCC
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS---LIFLARR 555 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~G 555 (752)
.+..+.+.|+..||..|.+++++|++. +++|+||++||.+... .........+...+. ..|+++|
T Consensus 22 ~~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~-------~~~~~~~~~~~~~~~~~~~~la~~G 89 (615)
T 1mpx_A 22 DYIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASG-------RTERLASPHMKDLLSAGDDVFVEGG 89 (615)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH-------HTCSSCCSSHHHHSCGGGHHHHHTT
T ss_pred CCEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCcc-------ccccccccccccccchhHHHHHhCC
Confidence 456788999999999999999999862 3589999999853210 000000000000112 7789999
Q ss_pred cEEEecCCCCCCCCCCCCCCc-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCc
Q 004456 556 FAVLAGPSIPIIGEGDKLPND-----RFVE---QLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHL 626 (752)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~-----~~~~---~~~~d~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~ 626 (752)
|+|+.++.++..+.+...... .+.. ..++|+.++++||.++ +..| .||+++|+||||++++.++..+|+.
T Consensus 90 y~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~ 168 (615)
T 1mpx_A 90 YIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPA 168 (615)
T ss_dssp CEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTT
T ss_pred eEEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCc
Confidence 999996655433332221111 0122 5689999999999998 7666 5999999999999999999888899
Q ss_pred eeEEEEccCCCCCCC-Ccc---Cccc-c---------------------ccch------------------------hhh
Q 004456 627 FCCGIARSGSYNKTL-TPF---GFQT-E---------------------FRTL------------------------WEA 656 (752)
Q Consensus 627 ~~~~v~~~~~~~~~~-~~~---~~~~-~---------------------~~~~------------------------~~~ 656 (752)
++++|+.+++.+... ..+ +... . .... |..
T Consensus 169 l~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (615)
T 1mpx_A 169 LKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHK 248 (615)
T ss_dssp EEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHH
T ss_pred eEEEEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHH
Confidence 999999999988422 110 1000 0 0000 110
Q ss_pred -------HHHHHhcChhhhcCC--CCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCC---cEEEEEeCCCCccCCc--
Q 004456 657 -------TNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA---LSRLVLLPFEHHVYAA-- 722 (752)
Q Consensus 657 -------~~~~~~~~~~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~~~-- 722 (752)
.+.|...+|..++++ |++|+|++||..|.+ + ..++.+++++|+..|. +.++++.|. +|+...
T Consensus 249 ~~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~ 324 (615)
T 1mpx_A 249 LTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYD 324 (615)
T ss_dssp HHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSC
T ss_pred HHhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCcccc
Confidence 123455688888899 999999999999997 7 7789999999998864 389999988 597511
Q ss_pred ----------cccHH-HHHHHHHHHHHHHhcCC
Q 004456 723 ----------RENVM-HVIWETDRWLQKYCLSN 744 (752)
Q Consensus 723 ----------~~~~~-~~~~~~~~fl~~~l~~~ 744 (752)
.+... ...+.+++||+++|++.
T Consensus 325 ~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 325 GSALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp CSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred ccccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 11111 22567899999999865
No 73
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.82 E-value=1.7e-19 Score=184.60 Aligned_cols=188 Identities=18% Similarity=0.170 Sum_probs=147.1
Q ss_pred EEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC
Q 004456 496 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN 575 (752)
Q Consensus 496 ~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~ 575 (752)
.+.+++|... .+.|+||++||.+... . .+..++..|+++||.|++++ .+|.|.+
T Consensus 84 ~~~~~~p~~~-----~~~p~vv~~HG~~~~~-----------~----~~~~~~~~la~~G~~vv~~d---~~g~g~s--- 137 (306)
T 3vis_A 84 GGTIYYPREN-----NTYGAIAISPGYTGTQ-----------S----SIAWLGERIASHGFVVIAID---TNTTLDQ--- 137 (306)
T ss_dssp CEEEEEESSC-----SCEEEEEEECCTTCCH-----------H----HHHHHHHHHHTTTEEEEEEC---CSSTTCC---
T ss_pred ceEEEeeCCC-----CCCCEEEEeCCCcCCH-----------H----HHHHHHHHHHhCCCEEEEec---CCCCCCC---
Confidence 4677888762 2589999999964211 1 11246778899999999954 4566554
Q ss_pred chhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc
Q 004456 576 DRFVEQLVSSAEAAVEEVVRR------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 649 (752)
Q Consensus 576 ~~~~~~~~~d~~~~~~~l~~~------~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~ 649 (752)
.....+|+.++++++.+. ..+|.++|+++||||||++++.++.++|+ ++++|+++|....
T Consensus 138 ---~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~---------- 203 (306)
T 3vis_A 138 ---PDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN---------- 203 (306)
T ss_dssp ---HHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC----------
T ss_pred ---cchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc----------
Confidence 123457888999999987 66788999999999999999999999987 8999999885331
Q ss_pred ccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHH-HHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHH
Q 004456 650 FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 728 (752)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 728 (752)
..+.++++|+|+++|++|.++| +. +++.+++++...+ +++++++++++|.+.. +....
T Consensus 204 -----------------~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~-~~~~~ 262 (306)
T 3vis_A 204 -----------------KSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN-ITNKT 262 (306)
T ss_dssp -----------------CCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG-SCCHH
T ss_pred -----------------cccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccchh-hchhH
Confidence 1245678999999999999998 77 6888888887765 7899999999998763 34578
Q ss_pred HHHHHHHHHHHHhcCC
Q 004456 729 VIWETDRWLQKYCLSN 744 (752)
Q Consensus 729 ~~~~~~~fl~~~l~~~ 744 (752)
+.+.+.+||++++.+.
T Consensus 263 ~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 263 IGMYSVAWLKRFVDED 278 (306)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHccCc
Confidence 8889999999999764
No 74
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.82 E-value=2.3e-18 Score=172.70 Aligned_cols=222 Identities=16% Similarity=0.153 Sum_probs=152.0
Q ss_pred CCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCC---CchhHHHHHh
Q 004456 478 ASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLA 553 (752)
Q Consensus 478 ~~~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 553 (752)
....++.+++.+. ++..+.+.+|+|+++.+. +++|+||++||++... ..+... ....+..|++
T Consensus 28 ~~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~--~~~P~vv~lHG~g~~~-----------~~~~~~~~~~~~~~~~l~~ 94 (268)
T 1jjf_A 28 PRGQVVNISYFSTATNSTRPARVYLPPGYSKD--KKYSVLYLLHGIGGSE-----------NDWFEGGGRANVIADNLIA 94 (268)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEECTTCCTT--SCBCEEEEECCTTCCT-----------TTTTTTTTCHHHHHHHHHH
T ss_pred CCceEEEEEEeccccCCceEEEEEeCCCCCCC--CCccEEEEECCCCCCc-----------chhhhccccHHHHHHHHHH
Confidence 4456788888765 567899999999986543 3599999999975321 112111 1123556777
Q ss_pred C----CcEEEecCCCCCCCCCCCCCCchhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEEeChHHHHHHHHHHhCCCc
Q 004456 554 R----RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSS-AEAAVEEVVRRGVA--DPSRIAVGGHSYGAFMTAHLLAHAPHL 626 (752)
Q Consensus 554 ~----G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d-~~~~~~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~~~~~p~~ 626 (752)
+ ||.|+.++++ +.+... ...+ ....++ +.++++++.++..+ |.++|+|+||||||++|+.++.++|+.
T Consensus 95 ~g~~~~~~vv~~d~~---~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 169 (268)
T 1jjf_A 95 EGKIKPLIIVTPNTN---AAGPGI-ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDK 169 (268)
T ss_dssp TTSSCCCEEEEECCC---CCCTTC-SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTT
T ss_pred cCCCCCEEEEEeCCC---CCCccc-cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchh
Confidence 6 5999996553 222221 1122 222333 45667788766544 789999999999999999999999999
Q ss_pred eeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCC-CEEEEEeCCCCCCCCCHHHHHHHHHHHHhCC
Q 004456 627 FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHG 705 (752)
Q Consensus 627 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~ 705 (752)
|+++++++|..+..... ..+.. .. .....+. |+|++||++|.++| . +++++++|++.|
T Consensus 170 ~~~~v~~s~~~~~~~~~--------~~~~~------~~---~~~~~~~pp~li~~G~~D~~v~--~--~~~~~~~l~~~g 228 (268)
T 1jjf_A 170 FAYIGPISAAPNTYPNE--------RLFPD------GG---KAAREKLKLLFIACGTNDSLIG--F--GQRVHEYCVANN 228 (268)
T ss_dssp CSEEEEESCCTTSCCHH--------HHCTT------TT---HHHHHHCSEEEEEEETTCTTHH--H--HHHHHHHHHHTT
T ss_pred hhheEEeCCCCCCCchh--------hhcCc------ch---hhhhhcCceEEEEecCCCCCcc--H--HHHHHHHHHHCC
Confidence 99999999965431100 00000 00 0001124 59999999999875 3 678899999999
Q ss_pred CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 706 ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 706 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
.+++++++++++|.+. .+...+..+++||.++.
T Consensus 229 ~~~~~~~~~g~~H~~~---~~~~~~~~~~~~l~~~~ 261 (268)
T 1jjf_A 229 INHVYWLIQGGGHDFN---VWKPGLWNFLQMADEAG 261 (268)
T ss_dssp CCCEEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCcCHh---HHHHHHHHHHHHHHhcC
Confidence 9999999999999864 24566788999998874
No 75
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=2.7e-18 Score=174.41 Aligned_cols=270 Identities=14% Similarity=0.129 Sum_probs=184.4
Q ss_pred cCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 59 ~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
.....|+++++.+++.+++..+.. .+..+.|||||+.|++...
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~~-------------------------------- 61 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPE-----LFEAPNWSPDGKYLLLNSE-------------------------------- 61 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESS-----CCEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCc-----ceEeeEECCCCCEEEEEcC--------------------------------
Confidence 456889999999999887765443 4678899999999998621
Q ss_pred hhccCChhhhhhhhhhcccEEEEEcc-C-CCccccCCc---cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D-GTAKDFGTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~-~-G~~~~l~~~---~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
..|+++++ + ++..++... ..+..++|||||++|++.....+ ....|+.
T Consensus 62 ------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------~~~~l~~ 114 (297)
T 2ojh_A 62 ------------------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---------GKSAIYL 114 (297)
T ss_dssp ------------------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---------SSCEEEE
T ss_pred ------------------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---------CcceEEE
Confidence 57999999 6 666555533 46678999999999999874421 1247888
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
+++.++..+.+.... .+..+.|+|||+. |+++...+ ....|+.++. .++....
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~-l~~~~~~~---------~~~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKS-FTYCGIRD---------QVFDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSE-EEEEEEET---------TEEEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCE-EEEEECCC---------CceEEEEEEC---CCCcceE
Confidence 888877666654432 1446799999998 77665322 2226777777 5566667
Q ss_pred EeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeee
Q 004456 294 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (752)
Q Consensus 294 l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~ 373 (752)
+......+..++|+|||+.|++....+ ....||.+++.+. ....+....... -.++|+|||++|++...+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~~i~~~~~~~~--~~~~~~~~~~~~-------~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRT-GQMQIWRVRVDGS--SVERITDSAYGD-------WFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSS--CEEECCCCSEEE-------EEEEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCC-CCccEEEECCCCC--CcEEEecCCccc-------CCeEECCCCCEEEEEEcC
Confidence 777777788999999999999886433 4568999987763 334444322111 115699999999998754
Q ss_pred cCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecC
Q 004456 374 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 448 (752)
Q Consensus 374 ~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~ 448 (752)
..... ........|++||+.+++.+.+...... ......++|||||+.|++.....
T Consensus 238 ~~~~~----------~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVFD----------HPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCCS----------CCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCc----------ccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 20000 0000124699999999887766542111 11223468999999999887554
No 76
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.81 E-value=3e-19 Score=178.49 Aligned_cols=201 Identities=15% Similarity=0.130 Sum_probs=147.2
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecC
Q 004456 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (752)
Q Consensus 483 ~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (752)
+...++..++..+.+.+|.|.+ ++.|+||++||++|..+. ...+ ..++..|+++||.|++++
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~--------~~~~----~~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFD--------KSSW----SHLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCC--------GGGC----GGGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCC--------hHHH----HHHHHHHHhCCCEEEEeC
Confidence 4445554566678888888875 237999999998643211 1112 245667889999999965
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEccCC
Q 004456 563 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCGIARSGS 636 (752)
Q Consensus 563 ~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~------p~~~~~~v~~~~~ 636 (752)
+ +|.+. .......+|+.++++++..+.. ++++|+||||||++++.++.++ |++++++|+++|.
T Consensus 101 ~---~~~~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~ 169 (262)
T 2pbl_A 101 Y---ELCPE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 169 (262)
T ss_dssp C---CCTTT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred C---CCCCC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCc
Confidence 5 34332 2356778999999999988753 6899999999999999999887 7899999999998
Q ss_pred CCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004456 637 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 716 (752)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 716 (752)
.+.......+. ..........+...++...+.++++|+|+++|++|..++ ..+++++++.+. +++++++++
T Consensus 170 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~ 240 (262)
T 2pbl_A 170 SDLRPLLRTSM--NEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEK 240 (262)
T ss_dssp CCCGGGGGSTT--HHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTC
T ss_pred cCchHHHhhhh--hhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCC
Confidence 76432111110 001112234455667777778889999999999999988 899999988886 689999999
Q ss_pred CccCC
Q 004456 717 HHVYA 721 (752)
Q Consensus 717 ~H~~~ 721 (752)
+|...
T Consensus 241 ~H~~~ 245 (262)
T 2pbl_A 241 HHFNV 245 (262)
T ss_dssp CTTTT
T ss_pred CcchH
Confidence 99765
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=7.7e-17 Score=171.33 Aligned_cols=358 Identities=13% Similarity=0.053 Sum_probs=219.9
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
...|.++++.. ++..... .....+..++|||||++|+++. .....|+++++++++..+......
T Consensus 11 d~~v~v~d~~~----~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~---------~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 11 SDNISVIDVTS----NKVTATI--PVGSNPMGAVISPDGTKVYVAN---------AHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp TTEEEEEETTT----TEEEEEE--ECSSSEEEEEECTTSSEEEEEE---------GGGTEEEEEETTTTEEEEEEECSS-
T ss_pred CCEEEEEECCC----CeEEEEe--ecCCCcceEEECCCCCEEEEEC---------CCCCeEEEEECCCCeEEEEEECCC-
Confidence 45788898876 6554443 2333578899999999997754 234789999999888665544333
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+..+.|+|||+.|++... ....|+++|
T Consensus 75 ----~v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d 102 (391)
T 1l0q_A 75 ----SPQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVID 102 (391)
T ss_dssp ----SEEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEE
T ss_pred ----CccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEE
Confidence 3578899999999987632 115799999
Q ss_pred c-CCCcccc-CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcc
Q 004456 164 L-DGTAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (752)
Q Consensus 164 ~-~G~~~~l-~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (752)
+ +++.... ..+.....++|+|||++|++..... ..|++||+.+++.........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~------------ 158 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVGR------------ 158 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEECCS------------
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecCC------------
Confidence 9 5644333 3336778999999999998876543 489999998876654433321
Q ss_pred ccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeeccc
Q 004456 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (752)
Q Consensus 242 ~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~ 321 (752)
.+..+.|+|||+. |++... ..+.|+++|+ .++...........+..++|+|||+.|++.....
T Consensus 159 -~~~~~~~~~dg~~-l~~~~~-----------~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~- 221 (391)
T 1l0q_A 159 -SPKGIAVTPDGTK-VYVANF-----------DSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK- 221 (391)
T ss_dssp -SEEEEEECTTSSE-EEEEET-----------TTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS-
T ss_pred -CcceEEECCCCCE-EEEEeC-----------CCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecCc-
Confidence 1567899999997 655532 2347899998 4444444445556678899999999988876321
Q ss_pred CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEe
Q 004456 322 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 401 (752)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d 401 (752)
....|+++|+.++ +......... ..-.++|+|||++|++.... ...|.+||
T Consensus 222 ~~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~s~dg~~l~~s~~~--------------------d~~v~v~d 272 (391)
T 1l0q_A 222 YFNTVSMIDTGTN--KITARIPVGP-------DPAGIAVTPDGKKVYVALSF--------------------XNTVSVID 272 (391)
T ss_dssp SCCEEEEEETTTT--EEEEEEECCS-------SEEEEEECTTSSEEEEEETT--------------------TTEEEEEE
T ss_pred CCCcEEEEECCCC--eEEEEEecCC-------CccEEEEccCCCEEEEEcCC--------------------CCEEEEEE
Confidence 3457999998874 2222221111 11126799999998777521 13699999
Q ss_pred cCCCceeEEeeccchhhh-hceeeeecC---CcceecccCC--C------EEEEEEecCCCCcEEEEEECCCCCeeEeec
Q 004456 402 INTGSKERIWESNREKYF-ETAVALVFG---QGEEDINLNQ--L------KILTSKESKTEITQYHILSWPLKKSSQITN 469 (752)
Q Consensus 402 ~~~g~~~~l~~~~~~~~~-~~~~~~~~~---~~~~~~s~d~--~------~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~ 469 (752)
+.+++...........+. ......... .....|+.+. . .+.|+.. .....+|.|++..|... +.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~--~~~~~~~~W~~~~g~~~--~~ 348 (391)
T 1l0q_A 273 TATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDL--SKDATEWKWDFGDGSSS--KK 348 (391)
T ss_dssp TTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEEC--CBSCSEEEEECSSSCEE--CS
T ss_pred CCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeC--CCCceEEEEECCCCccc--Cc
Confidence 999887554432211000 000010000 0112233222 1 1444432 23446889998877653 22
Q ss_pred CCCCCCCc--CCCceEEEEEEcCCCc--EEEEEEEeCCC
Q 004456 470 FPHPYPTL--ASLQKEMIKYQRKDGV--PLTATLYLPPG 504 (752)
Q Consensus 470 ~~~~~~~~--~~~~~~~~~~~~~~g~--~~~~~l~~P~~ 504 (752)
.+ +...+ +..-...+++.+.+|. .++...+.+++
T Consensus 349 ~~-~~~~~~~~g~y~~~~~~~~~~g~~~~~~~~~v~~~~ 386 (391)
T 1l0q_A 349 QN-PTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKG 386 (391)
T ss_dssp SS-CEECCSSCEEEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CC-CeEEeCCCceEEEEEEEECCCCcEEEEEEEEEEcCC
Confidence 22 21222 2233556777777773 45666666543
No 78
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.81 E-value=1.1e-18 Score=170.74 Aligned_cols=198 Identities=13% Similarity=0.089 Sum_probs=143.6
Q ss_pred EEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCC--------------
Q 004456 499 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-------------- 564 (752)
Q Consensus 499 l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~-------------- 564 (752)
++.|+. ..+.|+||++||.+... ..+ ..+...|+++||.|++++..
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDTG-----------HGW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSCH-----------HHH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCcc-----------chH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 556664 23589999999964211 111 13344556679999995321
Q ss_pred --CCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004456 565 --PIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 641 (752)
Q Consensus 565 --~~~g~g~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~ 641 (752)
+.+|+..... .........+++.++++++.+ ..+|.++++++|||+||++++.++.++|++++++|+++|......
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 3344421111 223455677888888888877 557778999999999999999999999999999999999754221
Q ss_pred CccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEEeCCCCcc
Q 004456 642 TPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVLLPFEHHV 719 (752)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~H~ 719 (752)
.. . ........+++|+|+++|++|..+| ...++++++.+.+.+.+ ++++++++++|.
T Consensus 153 ~~---~----------------~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 SF---P----------------QGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp GS---C----------------SSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred cc---c----------------ccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 00 0 0111245678999999999999999 99999999999887754 999999999998
Q ss_pred CCccccHHHHHHHHHHHHHHHhcC
Q 004456 720 YAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 720 ~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
+. .+..+.+.+||+++|..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCC
T ss_pred cC-----HHHHHHHHHHHHHhcCC
Confidence 73 23458899999999865
No 79
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.81 E-value=7e-19 Score=175.92 Aligned_cols=242 Identities=12% Similarity=-0.007 Sum_probs=155.6
Q ss_pred CceEEEEEEcC-CCcEEEEEEEeCCCCCC--CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH-HhCC
Q 004456 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQ--SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR 555 (752)
Q Consensus 480 ~~~~~~~~~~~-~g~~~~~~l~~P~~~~~--~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G 555 (752)
+.++.+++.+. .+..+.+.+|+|++.+. ...++.|+||++||++... ..+... .....+ .+.|
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-----------~~~~~~--~~~~~~~~~~~ 71 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH-----------NSWLKR--TNVERLLRGTN 71 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT-----------THHHHH--SCHHHHTTTCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH-----------HHHHhc--cCHHHHHhcCC
Confidence 56778888754 57789999999987520 1134589999999975221 111110 013334 3589
Q ss_pred cEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004456 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (752)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~ 635 (752)
|.|+.++++ ..++........+.....+|+.+.++.+..+..+|.++++|+|||+||++|+.++. +|++|+++|+++|
T Consensus 72 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~ 149 (263)
T 2uz0_A 72 LIVVMPNTS-NGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSG 149 (263)
T ss_dssp CEEEECCCT-TSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESC
T ss_pred eEEEEECCC-CCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecC
Confidence 999984442 22222211122344555666666666554423467789999999999999999999 8999999999999
Q ss_pred CCCCCCCccCccccccch-hh------hHHHHHhcChhhhcCCCC--CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCC
Q 004456 636 SYNKTLTPFGFQTEFRTL-WE------ATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 706 (752)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~ 706 (752)
..+............... +. ....+...++...+.++. +|+|++||++|.++ .+++++++++++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v----~~~~~~~~~l~~~g~ 225 (263)
T 2uz0_A 150 ALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY----EANNLAVKNLKKLGF 225 (263)
T ss_dssp CCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH----HHHHHHHHHHHHTTC
T ss_pred CcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh----HHHHHHHHHHHHCCC
Confidence 876543211000000000 00 000122334555555554 79999999999885 356889999999999
Q ss_pred cEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCC
Q 004456 707 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 707 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 744 (752)
+++++++++ +|.+. .....++.+++||.++|...
T Consensus 226 ~~~~~~~~g-~H~~~---~~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 226 DVTYSHSAG-THEWY---YWEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp EEEEEEESC-CSSHH---HHHHHHHHHHHHSSSCCCCC
T ss_pred CeEEEECCC-CcCHH---HHHHHHHHHHHHHHhhccch
Confidence 999999999 99753 23567788999999998754
No 80
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.81 E-value=6.5e-19 Score=184.54 Aligned_cols=238 Identities=13% Similarity=0.015 Sum_probs=162.2
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
.+..+.+.+...+|..+.+.+|.|.+.. ++.|+||++||+++..+.. . ...+...+..|+++||+|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~~----~~~p~vv~iHGgg~~~g~~--------~--~~~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGVE----GVLPGLVYTHGGGMTILTT--------D--NRVHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCC----SCEEEEEEECCSTTTSSCS--------S--SHHHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCCC----CCCeEEEEEcCCccccCCC--------c--ccchhHHHHHHHhCCCEE
Confidence 4567788888888878999999997631 2589999999987543211 1 001123466788899999
Q ss_pred EecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-----CCCceeEE
Q 004456 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-----APHLFCCG 630 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~-----~p~~~~~~ 630 (752)
++++++...|. . +.......+.|+.++++|+.+.. .+| +|+|+|||+||++++.++.. .|++++++
T Consensus 145 v~~d~r~~gg~---~-~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFRNAWTA---E-GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECCCSEET---T-EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecCCCCCC---C-CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 99666543221 1 11223455788999999998762 334 99999999999999999988 77789999
Q ss_pred EEccCCCCCCCC---------ccCccccccchhh--h----HHHHH---------hcChh----hhcCCCCCCEEEEEeC
Q 004456 631 IARSGSYNKTLT---------PFGFQTEFRTLWE--A----TNVYI---------EMSPI----THANKIKKPILIIHGE 682 (752)
Q Consensus 631 v~~~~~~~~~~~---------~~~~~~~~~~~~~--~----~~~~~---------~~~~~----~~~~~~~~P~li~~G~ 682 (752)
|+++|..+.... ...+.......+. . ...+. ..+++ ..+..+. |+||+||+
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~ 297 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNE 297 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEET
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcC
Confidence 999998765110 0000000000000 0 00110 11232 2345555 99999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCC-cc----ccH-HHHHHHHHHHHHHHh
Q 004456 683 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA-AR----ENV-MHVIWETDRWLQKYC 741 (752)
Q Consensus 683 ~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~~~~fl~~~l 741 (752)
+|.++ .+++++++++++.+.+++++++++++|.+. .. +.. ..+.+.+.+||+++.
T Consensus 298 ~D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99885 378889999999999999999999999876 22 333 678889999998875
No 81
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.81 E-value=1.5e-19 Score=192.72 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=158.9
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
....+.+.++. +|..+.++++.+. .++.|+||++||.+... ..+ .......++++||.|
T Consensus 132 ~~~~~~~~i~~-~~~~l~~~~~~~~------~~~~p~vv~~HG~~~~~-----------~~~---~~~~~~~~~~~g~~v 190 (405)
T 3fnb_A 132 KIPLKSIEVPF-EGELLPGYAIISE------DKAQDTLIVVGGGDTSR-----------EDL---FYMLGYSGWEHDYNV 190 (405)
T ss_dssp SCCCEEEEEEE-TTEEEEEEEECCS------SSCCCEEEEECCSSCCH-----------HHH---HHHTHHHHHHTTCEE
T ss_pred CCCcEEEEEeE-CCeEEEEEEEcCC------CCCCCEEEEECCCCCCH-----------HHH---HHHHHHHHHhCCcEE
Confidence 34578888886 5778999988432 22369999999953110 111 111233567899999
Q ss_pred EecCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 559 LAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
++ .+.+|+|.+... .........|+.++++++..+. ++|+|+|||+||++++.++.++| +++++|+.+|..
T Consensus 191 i~---~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~ 262 (405)
T 3fnb_A 191 LM---VDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIY 262 (405)
T ss_dssp EE---ECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCS
T ss_pred EE---EcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcC
Confidence 99 455566665221 1112244678889999987654 68999999999999999999998 899999999987
Q ss_pred CCCCCc-------cCccc-------------cccchhh---------------hHHHHHhcChhhhcCCCCCCEEEEEeC
Q 004456 638 NKTLTP-------FGFQT-------------EFRTLWE---------------ATNVYIEMSPITHANKIKKPILIIHGE 682 (752)
Q Consensus 638 ~~~~~~-------~~~~~-------------~~~~~~~---------------~~~~~~~~~~~~~~~~~~~P~li~~G~ 682 (752)
+..... ...+. .....|. ....+....+...+.++++|+|+++|+
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~ 342 (405)
T 3fnb_A 263 DVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGA 342 (405)
T ss_dssp CHHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEET
T ss_pred CHHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecC
Confidence 621000 00000 0000000 001122222222367789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccC--CccccHHHHHHHHHHHHHHHhcCC
Q 004456 683 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY--AARENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 683 ~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~fl~~~l~~~ 744 (752)
+|.++| +.+++++++.++..+.+++++++++..|+. ...+....+.+.+.+||+++|+.+
T Consensus 343 ~D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~k 404 (405)
T 3fnb_A 343 GEDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKKK 404 (405)
T ss_dssp TSCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC--
T ss_pred CCcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCcC
Confidence 999998 999999999999988899999996655541 235667888999999999999753
No 82
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.81 E-value=2.6e-18 Score=166.27 Aligned_cols=187 Identities=19% Similarity=0.144 Sum_probs=138.4
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh--CCcEEEecCCC----------------CCCCCCCC
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDK 572 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~ 572 (752)
++.|+||++||.+... .. +..++..|++ +||.|++++.. +..|+|.+
T Consensus 12 ~~~~~vv~~HG~~~~~-----------~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 76 (218)
T 1auo_A 12 PADACVIWLHGLGADR-----------YD----FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPA 76 (218)
T ss_dssp CCSEEEEEECCTTCCT-----------TT----THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSS
T ss_pred CCCcEEEEEecCCCCh-----------hh----HHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcc
Confidence 3589999999964211 11 2345667777 99999996532 33444433
Q ss_pred CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEccCCCCCCCCccCccccc
Q 004456 573 LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEF 650 (752)
Q Consensus 573 ~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~-~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 650 (752)
... ........+++.++++++.+ ..++.++|+++|||+||++++.++. ++|++++++|+++|..... .+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~----~~~~~- 150 (218)
T 1auo_A 77 RSISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF----GDELE- 150 (218)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC----CTTCC-
T ss_pred cccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc----hhhhh-
Confidence 221 22345567778888888876 4467789999999999999999999 9999999999999976530 00000
Q ss_pred cchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHH
Q 004456 651 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 730 (752)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 730 (752)
.....+++|+|+++|++|..+| +..++++++.+.+.+.++++++++ ++|.+.. +..
T Consensus 151 ----------------~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~ 206 (218)
T 1auo_A 151 ----------------LSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEI 206 (218)
T ss_dssp ----------------CCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHH
T ss_pred ----------------hhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccCH-----HHH
Confidence 0012357899999999999999 999999999999988899999999 9998642 356
Q ss_pred HHHHHHHHHHhc
Q 004456 731 WETDRWLQKYCL 742 (752)
Q Consensus 731 ~~~~~fl~~~l~ 742 (752)
+.+.+||.++|+
T Consensus 207 ~~~~~~l~~~l~ 218 (218)
T 1auo_A 207 HDIGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 789999998873
No 83
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.81 E-value=7e-20 Score=185.44 Aligned_cols=237 Identities=13% Similarity=0.128 Sum_probs=150.8
Q ss_pred ceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
..+.+++.+. .+..+.+.+|+|+++. .+++|+||++||+++.. ..+.. .......++++||.|+
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~-----------~~~~~-~~~~~~~~~~~g~~vv 85 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTE-----------QNFIT-KSGFQRYAAEHQVIVV 85 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCS-----------HHHHH-HSCTHHHHHHHTCEEE
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCc-----------cchhh-cccHHHHHhhCCeEEE
Confidence 4455555544 5778999999998764 23599999999975322 11110 0113455677899999
Q ss_pred ecCCCCCC------------CCCCCCCC----c------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 004456 560 AGPSIPII------------GEGDKLPN----D------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 617 (752)
Q Consensus 560 ~~~~~~~~------------g~g~~~~~----~------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 617 (752)
+++.. .+ |.|.+... . .+.....++ ++.++.+... +.+|++|+||||||++|+
T Consensus 86 ~~d~~-~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~-~~~~~~l~G~S~GG~~a~ 160 (283)
T 4b6g_A 86 APDTS-PRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNE---LPRLIEKHFP-TNGKRSIMGHSMGGHGAL 160 (283)
T ss_dssp EECSS-CCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTH---HHHHHHHHSC-EEEEEEEEEETHHHHHHH
T ss_pred Eeccc-cccccccccccccccCCCcccccCccCcccchhhHHHHHHHH---HHHHHHHhCC-CCCCeEEEEEChhHHHHH
Confidence 96532 11 22222110 0 112222333 3444444422 357999999999999999
Q ss_pred HHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCC--CCCEEEEEeCCCCCCCCCHHH-H
Q 004456 618 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQ-A 694 (752)
Q Consensus 618 ~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~li~~G~~D~~v~~~~~~-~ 694 (752)
.++.++|+.|+++++++|..+....++.........-.....+...+|...+.++ .+|+|++||+.|.+++ ... +
T Consensus 161 ~~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~ 238 (283)
T 4b6g_A 161 VLALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRT 238 (283)
T ss_dssp HHHHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCH
T ss_pred HHHHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhH
Confidence 9999999999999999997764322111000000000001122234454444443 3599999999999976 422 7
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
++++++|++.+.+++++++|+++|.+. .+...+..+++|+.++|+
T Consensus 239 ~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 239 EDFIETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 889999999999999999999999853 355677889999998773
No 84
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.81 E-value=3.3e-19 Score=170.42 Aligned_cols=184 Identities=13% Similarity=0.090 Sum_probs=125.2
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC-----chhHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-----DRFVEQLVSSA 586 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-----~~~~~~~~~d~ 586 (752)
..|+||++||.|.+. ..+. .++..|...|+.|++++..+...++..... ..........+
T Consensus 21 a~~~Vv~lHG~G~~~-----------~~~~----~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i 85 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTA-----------ADII----SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV 85 (210)
T ss_dssp CSEEEEEECCTTCCH-----------HHHH----GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCH-----------HHHH----HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH
Confidence 368999999954211 1111 223445568999999554322222211111 11223334444
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChh
Q 004456 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI 666 (752)
Q Consensus 587 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (752)
..+++.+.+. .+|++||+|+|+||||++++.+++++|++|+++|++++......... ..
T Consensus 86 ~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~---~~----------------- 144 (210)
T 4h0c_A 86 GEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI---GN----------------- 144 (210)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG---GG-----------------
T ss_pred HHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh---hh-----------------
Confidence 5555555554 47999999999999999999999999999999999998532110000 00
Q ss_pred hhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 667 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 667 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
......++|+|++||++|++|| +.+++++++.|++.|.++++++||+.+|.+.. +.++.+.+||.
T Consensus 145 ~~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 145 YKGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp CCBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred hhhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 0011235899999999999999 99999999999999999999999999998752 34566777764
No 85
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.81 E-value=1.8e-18 Score=169.77 Aligned_cols=212 Identities=17% Similarity=0.131 Sum_probs=151.5
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+| +...++.|.+ +.|+||++||.+... ..+ ..++..|+++||.|++ .+.+|+
T Consensus 10 ~~g--~~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~----~~~~~~l~~~G~~v~~---~d~~g~ 62 (238)
T 1ufo_A 10 LAG--LSVLARIPEA-------PKALLLALHGLQGSK-----------EHI----LALLPGYAERGFLLLA---FDAPRH 62 (238)
T ss_dssp ETT--EEEEEEEESS-------CCEEEEEECCTTCCH-----------HHH----HHTSTTTGGGTEEEEE---CCCTTS
T ss_pred cCC--EEEEEEecCC-------CccEEEEECCCcccc-----------hHH----HHHHHHHHhCCCEEEE---ecCCCC
Confidence 355 5556777764 369999999964211 111 1234466788999999 445566
Q ss_pred CCCCCCc---h----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 570 GDKLPND---R----------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 570 g~~~~~~---~----------~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
|.+.... . ......+|+.++++++.+... .+++++|||+||.+++.++.++|+.++++++.++.
T Consensus 63 g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 139 (238)
T 1ufo_A 63 GEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSG 139 (238)
T ss_dssp TTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCS
T ss_pred ccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCC
Confidence 6553321 1 245668899999999987653 78999999999999999999999888888888765
Q ss_pred CCCCCCccCccccccchhhhHHHHHhcChhhhcCCC-CCCEEEEEeCCCCCCCCCHHHHHHHHHHHH-hCCC-cEEEEEe
Q 004456 637 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALK-GHGA-LSRLVLL 713 (752)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~-~~~~-~~~~~~~ 713 (752)
.........+ ..+ .....+...++...+.++ ++|+|+++|++|..+| ...++++.+.+. ..+. +++++++
T Consensus 140 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (238)
T 1ufo_A 140 FPMKLPQGQV----VED-PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLARFVE 212 (238)
T ss_dssp SCCCCCTTCC----CCC-HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEEEEEE
T ss_pred ccchhhhhhc----cCC-cccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceEEEEe
Confidence 4322111110 000 113344455666667777 8999999999999999 999999999998 7776 8899999
Q ss_pred CCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 714 PFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 714 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
++++|.+.. +..+.+.+||.++|..
T Consensus 213 ~~~~H~~~~-----~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 213 EGAGHTLTP-----LMARVGLAFLEHWLEA 237 (238)
T ss_dssp TTCCSSCCH-----HHHHHHHHHHHHHHHC
T ss_pred CCCCcccHH-----HHHHHHHHHHHHHHhc
Confidence 999998642 3566788999988854
No 86
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.81 E-value=6.8e-19 Score=197.04 Aligned_cols=251 Identities=15% Similarity=0.146 Sum_probs=171.8
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH-HHHHhCCcEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v 558 (752)
+..+.+.|+..||..|.+++++|++. +++|+||++||.+..... ........+.. ....+ ..|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~~~---~~~~~~~~~~~-~~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKGRA---NRVPNALTMRE-VLPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHHT---CSSTTCSSHHH-HSCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCccc---ccccccccccc-cccchHHHHHhCCCEE
Confidence 45688999999999999999999862 358999999974321000 00000000000 00113 7789999999
Q ss_pred EecCCCCCCCCCCCCCCc-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 559 LAGPSIPIIGEGDKLPND-----RFV---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~-----~~~---~~~~~d~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
+.++.++..+.+...... .+. ...++|+.++++||.++ +..| .||+++|+||||++++.+++++|+.|++
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 996665444433322111 012 15789999999999998 7776 5999999999999999999888899999
Q ss_pred EEEccCCCCCCC-Cc---cCcccc----------------------ccch------------------------hhh---
Q 004456 630 GIARSGSYNKTL-TP---FGFQTE----------------------FRTL------------------------WEA--- 656 (752)
Q Consensus 630 ~v~~~~~~~~~~-~~---~~~~~~----------------------~~~~------------------------~~~--- 656 (752)
+|..+++.++.. .. .+.... .... |..
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999888532 11 010000 0000 000
Q ss_pred ----HHHHHhcChhhhcCC--CCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCC--CcEEEEEeCCCCccCCc------
Q 004456 657 ----TNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAA------ 722 (752)
Q Consensus 657 ----~~~~~~~~~~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~------ 722 (752)
.+.|...++..++++ |++|+|++||..|.+ + ..++.+++++|+..+ .+.++++.|. +|+...
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 122445678888888 999999999999997 6 668889999999988 8889999887 697521
Q ss_pred ------cc-cHHHHHHHHHHHHHHHhcCC
Q 004456 723 ------RE-NVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 723 ------~~-~~~~~~~~~~~fl~~~l~~~ 744 (752)
.+ ......+.+++||+++|++.
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 01 11223677899999999865
No 87
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.81 E-value=1.3e-18 Score=173.84 Aligned_cols=132 Identities=18% Similarity=0.172 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHh
Q 004456 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 662 (752)
Q Consensus 583 ~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (752)
..++.+.++.+.++..+|++||+|+|+|+||++++.++.++|+.|+++|.+++.... ...+
T Consensus 138 ~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~-----------------~~~~-- 198 (285)
T 4fhz_A 138 ARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA-----------------PERL-- 198 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC-----------------HHHH--
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC-----------------chhh--
Confidence 456667777777777799999999999999999999999999999999999884210 0000
Q ss_pred cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 663 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 663 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
......++|+|++||+.|.+|| ++++++++++|++.|.++++++|++.||.+. .+.+..+.+||+++|.
T Consensus 199 ----~~~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~-----~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 199 ----AEEARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVMKGTGHGIA-----PDGLSVALAFLKERLP 267 (285)
T ss_dssp ----HHHCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHHHCC
T ss_pred ----hhhhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----HHHHHHHHHHHHHHCc
Confidence 1122346899999999999999 9999999999999999999999999999875 2457789999999995
Q ss_pred CC
Q 004456 743 SN 744 (752)
Q Consensus 743 ~~ 744 (752)
..
T Consensus 268 d~ 269 (285)
T 4fhz_A 268 DA 269 (285)
T ss_dssp --
T ss_pred CC
Confidence 43
No 88
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=2.7e-18 Score=196.20 Aligned_cols=285 Identities=13% Similarity=0.063 Sum_probs=184.1
Q ss_pred CCceeecCCCCCceec---------eeEec--CCCCe-EEEeeccccccccccCcceEEEEEcc--c-CcceeccCCCCc
Q 004456 19 GPEKEVHGYPDGAKIN---------FVSWS--PDGKR-IAFSVRVDEEDNVSSCKLRVWIADAE--T-GEAKPLFESPDI 83 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~---------~~~~S--PDG~~-ia~~~~~~~~~~~~~~~~~l~v~~~~--~-g~~~~lt~~~~~ 83 (752)
|+.++++..+. .+. .+.|| |||++ |||+.. ...+||+++++ + ++.++|+.....
T Consensus 58 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~---------~~~~l~~~~~~~~g~~~~~~l~~~~~~ 126 (662)
T 3azo_A 58 GAEESALPAPW--NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF---------GDQRLYAFEPDAPGGAVPRPLTPVSAV 126 (662)
T ss_dssp SCEEESSCTTC--CBCCCGGGTCCCCEEEECCSSSSCEEEEEBT---------TTCCEEEECTTSTTCCCCEECSCCCCS
T ss_pred CCcceeCCCCc--cccccccccCCccceeeeecCCCeEEEEEEC---------CCCeEEEEcCCCCCCCCCEeccCCccC
Confidence 77888874432 233 56676 99999 999753 24789999998 6 889999864311
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.....+..++|||||+.|+|.+....... . .....+||+++
T Consensus 127 ~~~~~~~~~~~spDg~~l~~~~~~~~~~~---------------------------------~------~~~~~~i~~~~ 167 (662)
T 3azo_A 127 GGGLRWADPVLLPERGEVWCMAEEFTGEG---------------------------------P------SDVRRFLAAVP 167 (662)
T ss_dssp TTCEEEEEEEEETTTTEEEEEEEEECSSS---------------------------------T------TCEEEEEEEEE
T ss_pred CCCccccCcEECCCCCEEEEEEecccCCC---------------------------------C------CCceeEEEEEE
Confidence 00113568899999999999864211100 0 00226899999
Q ss_pred c-C------CCccccC-Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC-Cc---eeEEecCCCCC
Q 004456 164 L-D------GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK---LVRELCDLPPA 230 (752)
Q Consensus 164 ~-~------G~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~---~~~~l~~~~~~ 230 (752)
+ + |+.++++ .. ..+..++|||||++|+|.+...+.. .....+|++++++ ++ +.+.+.....
T Consensus 168 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~-----~~~~~~i~~~d~~~~g~~~~~~~l~~~~~- 241 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM-----PWEGTELKTARVTEDGRFADTRTLLGGPE- 241 (662)
T ss_dssp TTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC-----TTTCEEEEEEEECTTSCEEEEEEEEEETT-
T ss_pred CCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC-----CCCCcEEEEEEECCCCcccccEEeCCCCC-
Confidence 9 4 5667777 55 6778999999999999987654210 0012579999998 45 5556554311
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccccee--------
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFR-------- 302 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-------- 302 (752)
..+..+.|||||+ ++|++..+ ....|+++++ ++++.+.++.......
T Consensus 242 -----------~~~~~~~~spdg~--l~~~~~~~---------~~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 242 -----------EAIAQAEWAPDGS--LIVATDRT---------GWWNLHRVDP---ATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp -----------BCEEEEEECTTSC--EEEEECTT---------SSCEEEEECT---TTCCEEESSCCSSBSSCCCCSTTC
T ss_pred -----------ceEcceEECCCCe--EEEEECCC---------CCeEEEEEEC---CCCceeecccccccccCccccccC
Confidence 1255789999999 66665322 2237999987 5666677765544433
Q ss_pred -eeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEE
Q 004456 303 -SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 381 (752)
Q Consensus 303 -~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~ 381 (752)
.++|+||++.+ +.... +..+||+++++++ ..+.++...... .-.|++||+.+++.....
T Consensus 297 ~~~~~~~~~~~~-~~~~~--~~~~l~~~d~~~~--~~~~l~~~~~~~--------~~~~s~~~~~~~~~~~~~------- 356 (662)
T 3azo_A 297 RWFAPLANGLIA-VVHGK--GAAVLGILDPESG--ELVDAAGPWTEW--------AATLTVSGTRAVGVAASP------- 356 (662)
T ss_dssp CSEEECTTSCEE-EEEBS--SSCEEEEEETTTT--EEEECCSSCCEE--------EEEEEEETTEEEEEEEET-------
T ss_pred ceEeEeCCCEEE-EEEEc--CccEEEEEECCCC--cEEEecCCCCeE--------EEEEecCCCEEEEEEcCC-------
Confidence 45556777644 44433 5678999998874 344454321110 011478888888876431
Q ss_pred EEccCCCCCCCCCCeeEEEecCCCceeEEeecc
Q 004456 382 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (752)
Q Consensus 382 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (752)
.....||++|+++++.+.|+..+
T Consensus 357 ----------~~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 357 ----------RTAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp ----------TEEEEEEEEETTTCCEEEEESCC
T ss_pred ----------CCCCEEEEEECCCCceEEeecCC
Confidence 22346999999999988887554
No 89
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.80 E-value=4.5e-19 Score=188.52 Aligned_cols=230 Identities=13% Similarity=0.066 Sum_probs=153.3
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
....+.+.++. +|..+.++++.|.+ .++.|+||++||.+.. .......++..++++||.|
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~--------------~~~~~~~~~~~l~~~G~~V 224 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSL--------------QTDMWRLFRDHLAKHDIAM 224 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSC--------------GGGGHHHHHHTTGGGTCEE
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCcc--------------HHHHHHHHHHHHHhCCCEE
Confidence 45688899987 77899999999976 3358999999996311 0111112356677899999
Q ss_pred EecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
+++ +.+|+|.+...... .........+++++.+...+|.++|+|+|||+||++++.++..+|++++++|+++|..+
T Consensus 225 ~~~---D~~G~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~ 300 (415)
T 3mve_A 225 LTV---DMPSVGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH 300 (415)
T ss_dssp EEE---CCTTSGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCS
T ss_pred EEE---CCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccc
Confidence 994 44566555322110 11122235778888888778889999999999999999999999999999999999754
Q ss_pred CCCCccC----cccc---------c---cchhhhHHHHHhcChhhh----cCCCCCCEEEEEeCCCCCCCCCHHHHHHHH
Q 004456 639 KTLTPFG----FQTE---------F---RTLWEATNVYIEMSPITH----ANKIKKPILIIHGEVDDKVGLFPMQAERFF 698 (752)
Q Consensus 639 ~~~~~~~----~~~~---------~---~~~~~~~~~~~~~~~~~~----~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 698 (752)
....... .+.. . .........+...++... +.++++|+|+++|++|.++| +.+++.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~ 378 (415)
T 3mve_A 301 DIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVA 378 (415)
T ss_dssp HHHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHH
T ss_pred cccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHH
Confidence 1110000 0000 0 000000011122222221 35778999999999999998 88776655
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 699 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+ ...+++++++++..| ..........+.+||.++|.
T Consensus 379 ~----~~~~~~l~~i~g~~~----h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 379 F----FSTYGKAKKISSKTI----TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp H----TBTTCEEEEECCCSH----HHHHHHHHHHHHHHHHHHHT
T ss_pred H----hCCCceEEEecCCCc----ccchHHHHHHHHHHHHHHhc
Confidence 4 456779999998322 22466788999999999984
No 90
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.80 E-value=1.9e-18 Score=170.97 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=144.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---h-hHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---R-FVEQLVSSAEA 588 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~-~~~~~~~d~~~ 588 (752)
.|+||++||.+... . .+..++..|+++||.|++ .+.+|+|.+.... . ......+|+.+
T Consensus 22 ~~~vv~~HG~~~~~-----------~----~~~~~~~~l~~~G~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTGSP-----------N----DMNFMARALQRSGYGVYV---PLFSGHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTCCG-----------G----GGHHHHHHHHHTTCEEEE---CCCTTCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCCCH-----------H----HHHHHHHHHHHCCCEEEe---cCCCCCCCCChhhhcCcccHHHHHHHHHH
Confidence 68999999964211 1 123567788899999999 5566777663332 1 34556788999
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccc------------cch-h-
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF------------RTL-W- 654 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~------------~~~-~- 654 (752)
+++++... .++++++||||||++++.++.++|+.++++++.+|............... ... +
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999876 47999999999999999999999999999999888765321110000000 000 0
Q ss_pred ----hhHHHHHh--cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHH
Q 004456 655 ----EATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 728 (752)
Q Consensus 655 ----~~~~~~~~--~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 728 (752)
.....+.. ......+.++++|+|+++|++|..+| +..++.+++.+... .+++++++++++|.+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 00000000 01233467788999999999999999 88888888887664 56799999999999875555888
Q ss_pred HHHHHHHHHHHHh
Q 004456 729 VIWETDRWLQKYC 741 (752)
Q Consensus 729 ~~~~~~~fl~~~l 741 (752)
+.+.+.+||++..
T Consensus 237 ~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 237 LEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998754
No 91
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.80 E-value=4.5e-18 Score=179.80 Aligned_cols=241 Identities=13% Similarity=0.091 Sum_probs=159.6
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCC--CchhHHHHHhCCc
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TPTSSLIFLARRF 556 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~G~ 556 (752)
.+..+.+.+...+|..+.+..+.|....+...++.|+||++||.+... ..|... ...++..|+++||
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~-----------~~~~~~~~~~~~a~~l~~~G~ 92 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-----------TNWISNLPNNSLAFILADAGY 92 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-----------GGGSSSCTTTCHHHHHHHTTC
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch-----------hhhhcCCCcccHHHHHHHCCC
Confidence 356788889999999999988876542111112479999999975321 122221 1235668889999
Q ss_pred EEEecCCCCCCCCCCCCCC-----------chhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004456 557 AVLAGPSIPIIGEGDKLPN-----------DRFVEQLVS-SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 624 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~-----------~~~~~~~~~-d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p 624 (752)
.|++ .+.+|+|.+... ........+ |+.++++++.+.. +.++++|+||||||.+++.++.++|
T Consensus 93 ~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p 167 (377)
T 1k8q_A 93 DVWL---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNP 167 (377)
T ss_dssp EEEE---CCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCH
T ss_pred CEEE---ecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCc
Confidence 9999 555677766431 223456666 9999999887753 2468999999999999999999999
Q ss_pred C---ceeEEEEccCCCCCCCCccCcc-------------------ccccchh----------------------------
Q 004456 625 H---LFCCGIARSGSYNKTLTPFGFQ-------------------TEFRTLW---------------------------- 654 (752)
Q Consensus 625 ~---~~~~~v~~~~~~~~~~~~~~~~-------------------~~~~~~~---------------------------- 654 (752)
+ +++++|+++|............ ......+
T Consensus 168 ~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 1k8q_A 168 KLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFD 247 (377)
T ss_dssp HHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCC
T ss_pred hhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCC
Confidence 8 8999999998754221100000 0000000
Q ss_pred ------hhHHHHHh-------------------------c----------------ChhhhcCCCCCCEEEEEeCCCCCC
Q 004456 655 ------EATNVYIE-------------------------M----------------SPITHANKIKKPILIIHGEVDDKV 687 (752)
Q Consensus 655 ------~~~~~~~~-------------------------~----------------~~~~~~~~~~~P~li~~G~~D~~v 687 (752)
.....+.. . .+...+.++++|+|+++|++|.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 327 (377)
T 1k8q_A 248 TMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327 (377)
T ss_dssp GGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSS
T ss_pred cccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCccc
Confidence 00000000 0 011226678899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc--cccHHHHHHHHHHHHHHH
Q 004456 688 GLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQKY 740 (752)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 740 (752)
| +..++++.+.+... .++++++++||.... .+.+..+.+.+.+||+++
T Consensus 328 ~--~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 328 D--PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp C--HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred C--HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 9 88877776655322 248999999998653 366778889999999753
No 92
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.79 E-value=4.9e-18 Score=163.20 Aligned_cols=180 Identities=13% Similarity=0.078 Sum_probs=130.8
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCC----------CCCCCCCCCCC---chh
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI----------PIIGEGDKLPN---DRF 578 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~----------~~~g~g~~~~~---~~~ 578 (752)
+.| ||++||.+... .. ...++..|+ .+|.|++++.. +..|.|..... ...
T Consensus 16 ~~p-vv~lHG~g~~~-----------~~----~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~ 78 (209)
T 3og9_A 16 LAP-LLLLHSTGGDE-----------HQ----LVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLES 78 (209)
T ss_dssp SCC-EEEECCTTCCT-----------TT----THHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHH
T ss_pred CCC-EEEEeCCCCCH-----------HH----HHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHH
Confidence 478 99999964211 11 123444555 78999985521 02233322111 123
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHH
Q 004456 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 658 (752)
Q Consensus 579 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (752)
.....+++.+.++.+.++..+|.++++|+||||||++++.++.++|++++++|+++|.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 79 LDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc----------------
Confidence 3455666777777777766688899999999999999999999999999999999986442110
Q ss_pred HHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 659 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 659 ~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
.......+|+|++||++|.++| +.+++++++.+++.+.++++++++ ++|.+. .+....+.+||+
T Consensus 143 --------~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~ 206 (209)
T 3og9_A 143 --------QTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLT 206 (209)
T ss_dssp --------CCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHH
T ss_pred --------ccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHH
Confidence 0123457999999999999999 999999999999999999999998 799874 245678899998
Q ss_pred HH
Q 004456 739 KY 740 (752)
Q Consensus 739 ~~ 740 (752)
++
T Consensus 207 ~~ 208 (209)
T 3og9_A 207 ET 208 (209)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 93
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.79 E-value=5.1e-18 Score=170.06 Aligned_cols=227 Identities=12% Similarity=0.088 Sum_probs=152.3
Q ss_pred ceEEEEE-EcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 481 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~-~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
..+.+++ .+.+|..+.+..+.+.. .+.|+||++||.+... ..+. ...+...++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~~-----------~~~~--~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSDM-----------TGTK--ALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCCT-----------TSHH--HHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCcccc-----------ccch--HHHHHHHHHhCCCcEE
Confidence 4455555 45688888888776543 1269999999964210 0110 1124556778999999
Q ss_pred ecCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CC---CceeEEE
Q 004456 560 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGI 631 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~p---~~~~~~v 631 (752)
+ .+.+|+|.+... ........+|+.++++++. .++++|+|||+||.+++.++.+ +| ++++++|
T Consensus 71 ~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 R---FDYSGHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp E---ECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred E---eccccCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 9 455576666433 2345667788888888773 4789999999999999999999 99 8999999
Q ss_pred EccCCCCCCCCc-c-C--------------------cc-ccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCC
Q 004456 632 ARSGSYNKTLTP-F-G--------------------FQ-TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 688 (752)
Q Consensus 632 ~~~~~~~~~~~~-~-~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~ 688 (752)
+++|..+..... + . +. .....................+.++++|+|+++|++|..+|
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 221 (270)
T 3llc_A 142 LIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP 221 (270)
T ss_dssp EESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC
T ss_pred EecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC
Confidence 999875421100 0 0 00 00000011112223333445567789999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 689 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
...++++.+.+.. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 --~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 --YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp --HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888776643 3489999999999766555566777777777764
No 94
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.78 E-value=5.7e-18 Score=192.31 Aligned_cols=245 Identities=21% Similarity=0.227 Sum_probs=163.2
Q ss_pred cCCCcE--EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCccc-----CCcc------------------------c---
Q 004456 489 RKDGVP--LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDA-----AGQV------------------------R--- 534 (752)
Q Consensus 489 ~~~g~~--~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~-----~~~~------------------------~--- 534 (752)
..||.. |.+.+|+|++ .+++|+||..||.+...... ...+ .
T Consensus 180 ~~DG~~d~L~a~l~~P~~-----~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 180 EQRGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp TCSSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred CCCCCeeeEEEEEEecCC-----CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 468988 9999999987 24699999888754321100 0000 0
Q ss_pred -----CCCCccCCC-CchhHHHHHhCCcEEEecCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcC----------
Q 004456 535 -----GSPNEFSGM-TPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRG---------- 597 (752)
Q Consensus 535 -----~~~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~~~~l~~~~---------- 597 (752)
.+...|... .+.....|+++||+|++ .+.+|+|.+... ..+.....+|+.++++||..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~---~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~ 331 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIY---VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTH 331 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEE---ECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEE---ECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccc
Confidence 000011100 12345789999999999 455566665432 1223467899999999998531
Q ss_pred ----CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC---------CccCccccc---------cchh-
Q 004456 598 ----VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTEF---------RTLW- 654 (752)
Q Consensus 598 ----~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~---------~~~~~~~~~---------~~~~- 654 (752)
..+..||+++|+||||++++.+|+++|+.++++|..+|+.++.. ...++.... ...+
T Consensus 332 ~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~ 411 (763)
T 1lns_A 332 EIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLD 411 (763)
T ss_dssp EECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGS
T ss_pred cccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcC
Confidence 13456999999999999999999999999999999998764110 000111000 0000
Q ss_pred -----------h----h------------HHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 004456 655 -----------E----A------------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 707 (752)
Q Consensus 655 -----------~----~------------~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~ 707 (752)
. . ...|...++..+++++++|+|++||..|.+|| +.++.+++++++. +.+
T Consensus 412 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~~~ 488 (763)
T 1lns_A 412 GADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GHA 488 (763)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TCC
T ss_pred cchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-CCC
Confidence 0 0 01123345667788999999999999999998 9999999999887 666
Q ss_pred EEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 708 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 708 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
.++++ ++++|..........+.+.+.+||+++|++.+
T Consensus 489 ~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~~ 525 (763)
T 1lns_A 489 KHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLLDRD 525 (763)
T ss_dssp EEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCC
T ss_pred eEEEE-eCCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 66665 56789864332334568899999999998753
No 95
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.78 E-value=1.8e-18 Score=177.35 Aligned_cols=226 Identities=18% Similarity=0.101 Sum_probs=153.7
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEE
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~ 559 (752)
.++.+++++.+| .+.+.+| +. .++.|+||++||++|..++ ... ...++..|+ +.||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVICS--------IES----HDALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTSCC--------TGG----GHHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCcccccCC--------hhH----hHHHHHHHHHHhCCEEE
Confidence 588899988777 8999888 42 2248999999998753221 111 224566777 6899999
Q ss_pred ecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 004456 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 632 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~v~ 632 (752)
++++ +|.|++..+ ....|+.++++|+.+.. .+|+++|+|+|||+||++|+.++.+.|++ ++++|+
T Consensus 115 ~~dy---rg~g~~~~p-----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDY---RLAPEHKFP-----AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEEC---CCTTTSCTT-----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecC---CCCCCCCCC-----CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9554 465555322 34678888888888752 46778999999999999999999887655 999999
Q ss_pred ccCCCCCCCCccCccccccch--hh------hHHHHH---------hcChhh-hcCCCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 633 RSGSYNKTLTPFGFQTEFRTL--WE------ATNVYI---------EMSPIT-HANKIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~---------~~~~~~-~~~~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
++|..+.......+....... +. ....|. ..+|+. .+..+ +|+||++|+.|.++ .++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 999876432110000000000 00 000110 112322 12222 69999999999884 467
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCcc----ccHHHHHHHHHHHHHH
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQK 739 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~ 739 (752)
.++.+++++.+.+++++++++++|.+... +....+++.+.+||.+
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 78899999999999999999999987532 3346778888888864
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=1e-16 Score=167.70 Aligned_cols=278 Identities=9% Similarity=0.003 Sum_probs=177.8
Q ss_pred CceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 30 ~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
+.....++|||||++|+++.... ........|+++|.++++......... ....+.|+|||+.|+++..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~---~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~--- 108 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQS---RKLDKGGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNT--- 108 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCC---TTTEESEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEET---
T ss_pred ccCccceEECCCCCEEEEEcCCC---cCCCCCccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEec---
Confidence 33577899999999997754310 000125789999999888655433322 2457899999998887632
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc-c---------ce
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP-A---------VY 177 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~-~---------~~ 177 (752)
....|+++|+ +|+. ..+... . ..
T Consensus 109 ---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 109 ---------------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP 143 (353)
T ss_dssp ---------------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred ---------------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence 1157888888 5643 223221 1 25
Q ss_pred eccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceE
Q 004456 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTL 257 (752)
Q Consensus 178 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l 257 (752)
..+.|||||++|++...... ..|++||+.+++......... ..+..++|+|||+. |
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~-----------~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~-l 199 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKE-----------SVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKR-L 199 (353)
T ss_dssp EEEEEETTTTEEEEEEESSS-----------CEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTE-E
T ss_pred ceEEECCCCCEEEEEecCCC-----------ceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCE-E
Confidence 67899999999988764321 479999998876655433111 11457899999997 6
Q ss_pred EEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-----ccceeeeeeecCCceEEEeeecccCceeEEEEcCC
Q 004456 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
++.. ..+.++++|. .+++....... ......++|+|||+.+++... ....|+++|+.
T Consensus 200 ~~~~------------~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~ 261 (353)
T 3vgz_A 200 YTTN------------ADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS---KAAEVLVVDTR 261 (353)
T ss_dssp EEEC------------TTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES---SSSEEEEEETT
T ss_pred EEEc------------CCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC---CCCEEEEEECC
Confidence 6663 2347888888 44433322221 223456899999998877642 23469999998
Q ss_pred CCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEee
Q 004456 333 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (752)
Q Consensus 333 ~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (752)
++ +...... ... ...++|+|||+++++.... ...|.+||+.+++......
T Consensus 262 ~~--~~~~~~~--~~~------~~~~~~s~dg~~l~v~~~~--------------------~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 262 NG--NILAKVA--APE------SLAVLFNPARNEAYVTHRQ--------------------AGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp TC--CEEEEEE--CSS------CCCEEEETTTTEEEEEETT--------------------TTEEEEEETTTTEEEEEEE
T ss_pred CC--cEEEEEE--cCC------CceEEECCCCCEEEEEECC--------------------CCeEEEEECCCCeEEEEEe
Confidence 74 2222211 111 1236799999988777521 2369999999888765543
Q ss_pred ccchhhhhceeeeecCCcceecccCCCEEEEEEec
Q 004456 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (752)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~ 447 (752)
.... +. .++|+|||+.|+++...
T Consensus 312 ~~~~-----~~-------~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 312 TPTH-----PN-------SLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCSE-----EE-------EEEECTTSCEEEEEEEC
T ss_pred cCCC-----CC-------eEEEcCCCCEEEEEEcc
Confidence 3211 22 35899999988887655
No 97
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.78 E-value=1.9e-17 Score=158.63 Aligned_cols=198 Identities=14% Similarity=0.080 Sum_probs=138.5
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCch--hHHHHHhCCcEEE
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVL 559 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~ 559 (752)
.+...+. .+|.++++.+|.|.+ +.|+||++||.+... .. +.. ++..|+++||.|+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~----~~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFTS-----------MD----WDKADLFNNYSKIGYNVY 60 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCCG-----------GG----GGGGTHHHHHHTTTEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCCc-----------cc----cchHHHHHHHHhCCCeEE
Confidence 3444444 478899999999875 268999999974221 11 223 6778899999999
Q ss_pred ecCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 560 AGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 560 ~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
+++ .+|+|.+ ....... ...++..+.+..+.+.. +.++++++|||+||.+++.++.++|++++++|+++|.
T Consensus 61 ~~d---~~g~g~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 134 (207)
T 3bdi_A 61 APD---YPGFGRSASSEKYGIDR-GDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134 (207)
T ss_dssp EEC---CTTSTTSCCCTTTCCTT-CCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred EEc---CCcccccCcccCCCCCc-chHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCc
Confidence 944 4566655 3221111 01233333333333332 3468999999999999999999999999999999985
Q ss_pred CCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004456 637 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 716 (752)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 716 (752)
.... + ...+.++++|+++++|++|..++ +..++++.+.+ .++++++++++
T Consensus 135 ~~~~---~---------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~ 184 (207)
T 3bdi_A 135 WVES---L---------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASII----SGSRLEIVEGS 184 (207)
T ss_dssp SCGG---G---------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHS----TTCEEEEETTC
T ss_pred cccc---h---------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhc----CCceEEEeCCC
Confidence 2110 0 12345678999999999999998 88888777766 34689999999
Q ss_pred CccCCccccHHHHHHHHHHHHHH
Q 004456 717 HHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 717 ~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+|.+. .+....+.+.+.+||++
T Consensus 185 ~H~~~-~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 185 GHPVY-IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCcc-ccCHHHHHHHHHHHHhh
Confidence 99865 34466778888888864
No 98
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.78 E-value=1.4e-17 Score=163.73 Aligned_cols=190 Identities=16% Similarity=0.148 Sum_probs=133.0
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC-----CcEEEecCCC----------------CCCCCC
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-----RFAVLAGPSI----------------PIIGEG 570 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----G~~v~~~~~~----------------~~~g~g 570 (752)
+.|+||++||.+... ..+ ..+...|+.+ ||.|++++.. +..+.+
T Consensus 22 ~~p~vv~lHG~g~~~-----------~~~----~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDSG-----------QGL----RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCCH-----------HHH----HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCch-----------hhH----HHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 479999999964211 111 1244556554 6888884431 111222
Q ss_pred CCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc
Q 004456 571 DKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 649 (752)
Q Consensus 571 ~~~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~ 649 (752)
..... ........+++.+.++.+.+ ..++.++++|+||||||++|+.++.++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------- 158 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------- 158 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------
Confidence 21111 12344556666666666655 3468899999999999999999999999999999999987542210
Q ss_pred ccchhhhHHHHHhcChhhhcCCCCCC-EEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHH
Q 004456 650 FRTLWEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 728 (752)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 728 (752)
. ..... .....+| +|++||++|..+| +.+++++++.+++.+.+++++++++++|.+. .+
T Consensus 159 ---~---~~~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 159 ---V---YQALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp ---H---HHHHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred ---H---HHHHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 0 00000 1233566 9999999999999 9999999999999999999999999999875 45
Q ss_pred HHHHHHHHHHHHhcCC
Q 004456 729 VIWETDRWLQKYCLSN 744 (752)
Q Consensus 729 ~~~~~~~fl~~~l~~~ 744 (752)
..+.+.+||.++|...
T Consensus 219 ~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 219 ELDILKLWILTKLPGE 234 (239)
T ss_dssp HHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhCCCc
Confidence 6788999999999653
No 99
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.78 E-value=2.1e-17 Score=160.91 Aligned_cols=185 Identities=17% Similarity=0.183 Sum_probs=137.3
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh--CCcEEEecCCC----------------CCCCCCCC
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDK 572 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~ 572 (752)
++.|+||++||.+... .. +..++..|++ +||.|++++.. +..|+|.+
T Consensus 22 ~~~~~vv~lHG~~~~~-----------~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 86 (226)
T 3cn9_A 22 NADACIIWLHGLGADR-----------TD----FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA 86 (226)
T ss_dssp TCCEEEEEECCTTCCG-----------GG----GHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST
T ss_pred CCCCEEEEEecCCCCh-----------HH----HHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc
Confidence 3589999999964211 11 2245667777 99999996542 33455533
Q ss_pred CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEccCCCCCCCCccCccccc
Q 004456 573 LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEF 650 (752)
Q Consensus 573 ~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~-~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 650 (752)
... ........+++.++++.+.+ ..++.++|+|+|||+||.+++.++. ++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------- 157 (226)
T 3cn9_A 87 RAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------- 157 (226)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------
T ss_pred ccccchhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------
Confidence 222 23345667777777777766 3467789999999999999999999 999999999999986442100
Q ss_pred cchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHH
Q 004456 651 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 730 (752)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 730 (752)
+ ... ...+++|+|+++|++|..+| +..++++++.+...+.++++++++ ++|.+. .+..
T Consensus 158 ---~-------~~~----~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 215 (226)
T 3cn9_A 158 ---L-------ALD----ERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEI 215 (226)
T ss_dssp ---C-------CCC----TGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHH
T ss_pred ---h-------hhc----ccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhH
Confidence 0 001 13457999999999999999 999999999999988899999999 999864 2346
Q ss_pred HHHHHHHHHHh
Q 004456 731 WETDRWLQKYC 741 (752)
Q Consensus 731 ~~~~~fl~~~l 741 (752)
+.+.+||.++|
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 77999998875
No 100
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.78 E-value=5.9e-18 Score=174.77 Aligned_cols=216 Identities=9% Similarity=0.016 Sum_probs=146.9
Q ss_pred EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCCCCCCCCCCC
Q 004456 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 573 (752)
Q Consensus 495 ~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~ 573 (752)
+.++++.|.+ ++.|+||++|||++..+. ......++..|+ +.||.|++++++ +.+.
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~~------------~~~~~~~~~~la~~~g~~vi~~D~r---~~~~-- 140 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQP------------SPFHWRLLDKITLSTLYEVVLPIYP---KTPE-- 140 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSCC------------CHHHHHHHHHHHHHHCSEEEEECCC---CTTT--
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCCC------------CHHHHHHHHHHHHHhCCEEEEEeCC---CCCC--
Confidence 6777888865 136999999998643211 011123455666 469999996654 3221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEccCCCCCCCCccCcc-c
Q 004456 574 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQ-T 648 (752)
Q Consensus 574 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~v~~~~~~~~~~~~~~~~-~ 648 (752)
......++|+.++++++.+. ++.++|+|+||||||++|+.++.+.|++ ++++|+++|..+......... .
T Consensus 141 ---~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 141 ---FHIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ---CCchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 12355688999999999887 6778999999999999999999887665 999999999876432211111 0
Q ss_pred c-ccchh-------hhHHHHHh--------cChhhh-cCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 004456 649 E-FRTLW-------EATNVYIE--------MSPITH-ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 711 (752)
Q Consensus 649 ~-~~~~~-------~~~~~~~~--------~~~~~~-~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~ 711 (752)
. ....+ .....|.. .+|+.. +.. -+|+|+++|++|.. ..++..+.+++++.+.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~ 290 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEG-LPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFY 290 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTT-CCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCccc-CCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEE
Confidence 0 00000 00111111 122211 111 26999999999963 667788999999999999999
Q ss_pred EeCCCCccCCc--cccHHHHHHHHHHHHHHHhcC
Q 004456 712 LLPFEHHVYAA--RENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 712 ~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~l~~ 743 (752)
++++++|.+.. .+....+.+.+.+||.+++..
T Consensus 291 ~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~~ 324 (326)
T 3d7r_A 291 DYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQ 324 (326)
T ss_dssp EETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCCC
T ss_pred EeCCCcccccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999998764 255678889999999988753
No 101
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.3e-17 Score=171.25 Aligned_cols=229 Identities=14% Similarity=0.149 Sum_probs=146.6
Q ss_pred CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEE
Q 004456 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (752)
...+.+.+.. +|..+....+.+... .+..|+||++||.+... . .+..++..|+++||.|+
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~vv~~hG~~~~~-----------~----~~~~~~~~l~~~g~~v~ 77 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAPK----KANGRTILLMHGKNFCA-----------G----TWERTIDVLADAGYRVI 77 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECCS----SCCSCEEEEECCTTCCG-----------G----GGHHHHHHHHHTTCEEE
T ss_pred ccceeEEEec-CCCCeeEEEeecCCC----CCCCCeEEEEcCCCCcc-----------h----HHHHHHHHHHHCCCeEE
Confidence 4577777765 555666655554331 23479999999964211 1 12246778889999999
Q ss_pred ecCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 560 AGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
+ .+.+|+|.+.... .......+|+.++++.+ +.++++|+|||+||.+++.++.++|++++++|+++|.
T Consensus 78 ~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 148 (315)
T 4f0j_A 78 A---VDQVGFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI 148 (315)
T ss_dssp E---ECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCS
T ss_pred E---eecCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCc
Confidence 9 5556777664432 23445555555554443 3468999999999999999999999999999999986
Q ss_pred CCCCCCccCccc-----------------------------cccch---hh---------------------hHHHHHhc
Q 004456 637 YNKTLTPFGFQT-----------------------------EFRTL---WE---------------------ATNVYIEM 663 (752)
Q Consensus 637 ~~~~~~~~~~~~-----------------------------~~~~~---~~---------------------~~~~~~~~ 663 (752)
............ ..... +. ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (315)
T 4f0j_A 149 GLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQ 228 (315)
T ss_dssp CSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHC
T ss_pred ccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccc
Confidence 421100000000 00000 00 00011122
Q ss_pred ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHH------------HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHH
Q 004456 664 SPITHANKIKKPILIIHGEVDDKVGLFPMQA------------ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 731 (752)
Q Consensus 664 ~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 731 (752)
+....+.++++|+|+++|++|.++| ..+. .+..+.+.+....+++++++++||... .+.++.+.+
T Consensus 229 ~~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~ 305 (315)
T 4f0j_A 229 PVVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQ 305 (315)
T ss_dssp CCGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHH
T ss_pred hhhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHH
Confidence 2334567789999999999999987 4333 344555555556789999999999865 556778888
Q ss_pred HHHHHHHHH
Q 004456 732 ETDRWLQKY 740 (752)
Q Consensus 732 ~~~~fl~~~ 740 (752)
.+.+||+++
T Consensus 306 ~i~~fl~~~ 314 (315)
T 4f0j_A 306 ALLEGLQTQ 314 (315)
T ss_dssp HHHHHHCC-
T ss_pred HHHHHhccC
Confidence 888888653
No 102
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.78 E-value=1.2e-17 Score=167.60 Aligned_cols=202 Identities=16% Similarity=0.154 Sum_probs=142.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~ 590 (752)
.|+||++||.+.. ...+..++..|+++||.|++ .+.+|+|.+... ........+|+.+++
T Consensus 40 ~~~vv~~HG~~~~---------------~~~~~~~~~~l~~~G~~v~~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGT---------------PHSMRPLAEAYAKAGYTVCL---PRLKGHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCC---------------GGGTHHHHHHHHHTTCEEEE---CCCTTCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCC---------------hhHHHHHHHHHHHCCCEEEE---eCCCCCCCCccccccCCHHHHHHHHHHHH
Confidence 5999999996421 11123567788999999999 556677766321 223556788999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-----------cc------Cccc-----
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----------PF------GFQT----- 648 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~-----------~~------~~~~----- 648 (752)
+++..+ ..+++|+|||+||++++.++.++|+ ++++|+++|....... .+ ....
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999876 4799999999999999999999999 9999999986542100 00 0000
Q ss_pred --cccchhhhHHHHHh--cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccc
Q 004456 649 --EFRTLWEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 724 (752)
Q Consensus 649 --~~~~~~~~~~~~~~--~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 724 (752)
....+......+.. ......+.++++|+|+++|++|..+| +..++++++.+.. .+++++++|+++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 00000011111100 01223466788999999999999999 8888888877653 3679999999999987555
Q ss_pred cHHHHHHHHHHHHHHHh
Q 004456 725 NVMHVIWETDRWLQKYC 741 (752)
Q Consensus 725 ~~~~~~~~~~~fl~~~l 741 (752)
....+.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 55788999999999875
No 103
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.77 E-value=2.2e-17 Score=160.76 Aligned_cols=181 Identities=17% Similarity=0.101 Sum_probs=133.7
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCC---------CchhHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 582 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 582 (752)
+.|+||++||.+.. ...+...+..|++ ||.|++++ .+.+|.|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~~---------------~~~~~~~~~~l~~-g~~v~~~~-~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGGN---------------ELDLLPLAEIVDS-EASVLSVR-GNVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTCC---------------TTTTHHHHHHHHT-TSCEEEEC-CSEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCCC---------------hhHHHHHHHHhcc-CceEEEec-CcccCCcchhhccccCccCcChhhHHHH
Confidence 47999999996421 1112244556666 99999953 25556654321 11122334
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHh
Q 004456 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 662 (752)
Q Consensus 583 ~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (752)
+.++.+.++++.++..++.++|+++|||+||++++.++.++|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 55666667777777667889999999999999999999999999999999999754321
Q ss_pred cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 663 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 663 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
.......++|+|+++|+.|..+| ...++++++.+...+.++++ ++++++|.+. .+....+.+||.++|
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 01122347999999999999999 99999999999988888888 9999999873 345678999998865
No 104
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=3.8e-17 Score=170.58 Aligned_cols=296 Identities=15% Similarity=0.183 Sum_probs=175.6
Q ss_pred CcceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 3 ~~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
+...|+++++.+ |+.+++ ..+..|+|||||++|||++... ..+..+||++++++++.++++..+.
T Consensus 41 ~~~~l~~~d~~~----~~~~~l------~~~~~~~~SpDg~~la~~~~~~-----~~~~~~l~~~~~~~g~~~~l~~~~~ 105 (347)
T 2gop_A 41 YENTIVIENLKN----NARRFI------ENATMPRISPDGKKIAFMRANE-----EKKVSEIWVADLETLSSKKILEAKN 105 (347)
T ss_dssp EEEEEEEEETTT----CCEEEE------ESCEEEEECTTSSEEEEEEEET-----TTTEEEEEEEETTTTEEEEEEEESE
T ss_pred ccceEEEEeCCC----CceEEc------ccCCCeEECCCCCEEEEEEecc-----CCCcceEEEEECCCCceEEEEcCCC
Confidence 356789999988 887777 2477899999999999986421 1245789999999999999875532
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
+..+.|||||+.|+|.+....... .....+.+.+..++..+......+||++
T Consensus 106 ------~~~~~wspdg~~l~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 106 ------IRSLEWNEDSRKLLIVGFKRREDE----------------------DFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp ------EEEEEECTTSSEEEEEEECCCC-------------------------------CCCC---------CEEEEEEE
T ss_pred ------ccceeECCCCCEEEEEEccCCCcC----------------------CcEEEcccceeecCcccccCccceEEEE
Confidence 567899999999999864310000 0001112333344433332334789999
Q ss_pred cc-CCCc-cccCCccceeccccCCCCceEEEEecccCccccccccCc-cccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 163 SL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARF-SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 163 ~~-~G~~-~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
++ +|+. ++++.. .+..+.||||| |+|........ .... ...|++++ +++.+.++.. ..
T Consensus 158 d~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~----~~~~~~~~l~~~d--~~~~~~l~~~-~~--------- 218 (347)
T 2gop_A 158 DTESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREII----PQYFKFWDIYIWE--DGKEEKMFEK-VS--------- 218 (347)
T ss_dssp ETTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSS----CCSSCCEEEEEEE--TTEEEEEEEE-ES---------
T ss_pred ECCCCeEEeeecCC-CcccccCCCCe--EEEEEeccccc----ccccccccEEEeC--CCceEEeccC-cc---------
Confidence 99 5666 666653 67789999999 66665432110 0001 24788888 5666666543 11
Q ss_pred ccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-ccceee-eeeecCCceEEEee
Q 004456 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRS-VSWCDDSLALVNET 317 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~~-~~~spDg~~l~~~~ 317 (752)
...+||||+. |++.+...... ......|++++ +++.+.++.. ...+.. +.|+ || +++..
T Consensus 219 ------~~~~spdg~~-l~~~~~~~~~~----~~~~~~l~~~d-----~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~ 279 (347)
T 2gop_A 219 ------FYAVDSDGER-ILLYGKPEKKY----MSEHNKLYIYD-----GKEVMGILDEVDRGVGQAKIKD-GK--VYFTL 279 (347)
T ss_dssp ------EEEEEECSSC-EEEEECCSSSC----CCSSCEEEEEC-----SSCEEESSTTCCSEEEEEEEET-TE--EEEEE
T ss_pred ------eeeECCCCCE-EEEEEccccCC----ccccceEEEEC-----CCceEeccccCCcccCCccEEc-Cc--EEEEE
Confidence 1244999998 88876432110 11244788886 2345555543 455665 8999 88 66655
Q ss_pred ecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCee
Q 004456 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 397 (752)
Q Consensus 318 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 397 (752)
..+ ...+|| ++ .+ +...+..... .. ..++|++ + +++.... ......|
T Consensus 280 ~~~-~~~~l~-~~-~g---~~~~~~~~~~-~v------~~~~~s~--~-~~~~~~~-----------------~~~~~~l 326 (347)
T 2gop_A 280 FEE-GSVNLY-IW-DG---EIKPIAKGRH-WI------MGFDVDE--I-VVYLKET-----------------ATRLREL 326 (347)
T ss_dssp EET-TEEEEE-EE-SS---SEEEEECSSS-EE------EEEEESS--S-EEEEEEC-----------------SSSCCEE
T ss_pred ecC-CcEEEE-Ec-CC---ceEEEecCCC-eE------EeeeeeC--c-EEEEEcC-----------------CCChHHh
Confidence 333 456788 87 33 3344443211 11 1266888 3 5444421 1222378
Q ss_pred EEEecCCCceeEEeeccc
Q 004456 398 DLFDINTGSKERIWESNR 415 (752)
Q Consensus 398 ~~~d~~~g~~~~l~~~~~ 415 (752)
|.+| |+.++|+..+.
T Consensus 327 ~~~~---g~~~~lt~~n~ 341 (347)
T 2gop_A 327 FTWD---GEEKQLTDYND 341 (347)
T ss_dssp EEES---SSEEECCCTTS
T ss_pred eEeC---CcEEEeccccH
Confidence 8887 67777776554
No 105
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.76 E-value=6.1e-17 Score=164.84 Aligned_cols=228 Identities=12% Similarity=0.019 Sum_probs=144.1
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEe
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (752)
.++...+...+|..+.++.+.|....+ .+.|+||++||.+.. ...+..++..|+++||.|++
T Consensus 6 ~~~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~---------------~~~~~~~~~~L~~~G~~Vi~ 67 (305)
T 1tht_A 6 KTIAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARR---------------MDHFAGLAEYLSTNGFHVFR 67 (305)
T ss_dssp SCEEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGG---------------GGGGHHHHHHHHTTTCCEEE
T ss_pred cceEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccC---------------chHHHHHHHHHHHCCCEEEE
Confidence 356667777889999999998764211 136899999995311 11123467788889999999
Q ss_pred cCCCCCCCC-CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 561 GPSIPIIGE-GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 561 ~~~~~~~g~-g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
+|.+|+ |.+... .........|+.++++++.+.+ ..+++|+||||||.+|+.++.+ | +++++|+.++..
T Consensus 68 ---~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~ 139 (305)
T 1tht_A 68 ---YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVV 139 (305)
T ss_dssp ---ECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCS
T ss_pred ---eeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCch
Confidence 555565 655332 2234567789999999998543 4689999999999999999988 7 789999888754
Q ss_pred CCCC-------C-----cc-Ccccc----c--cchhhhHHHHHhc------ChhhhcCCCCCCEEEEEeCCCCCCCCCHH
Q 004456 638 NKTL-------T-----PF-GFQTE----F--RTLWEATNVYIEM------SPITHANKIKKPILIIHGEVDDKVGLFPM 692 (752)
Q Consensus 638 ~~~~-------~-----~~-~~~~~----~--~~~~~~~~~~~~~------~~~~~~~~~~~P~li~~G~~D~~v~~~~~ 692 (752)
+... . .. ..... . ............. +....+.++++|+|++||++|..+| +.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~ 217 (305)
T 1tht_A 140 NLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QE 217 (305)
T ss_dssp CHHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HH
T ss_pred hHHHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HH
Confidence 3100 0 00 00000 0 0000000001110 1234567899999999999999999 88
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccCCccccH---HHHHHHHHHHHHHH
Q 004456 693 QAERFFDALKGHGALSRLVLLPFEHHVYAARENV---MHVIWETDRWLQKY 740 (752)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~---~~~~~~~~~fl~~~ 740 (752)
.++++++.+.. ...++++++++||.+. +.+ ..++..+.+|....
T Consensus 218 ~~~~l~~~i~~--~~~~l~~i~~agH~~~--e~p~~~~~fl~~~~~~~~~~ 264 (305)
T 1tht_A 218 EVYDMLAHIRT--GHCKLYSLLGSSHDLG--ENLVVLRNFYQSVTKAAIAM 264 (305)
T ss_dssp HHHHHHTTCTT--CCEEEEEETTCCSCTT--SSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CCcEEEEeCCCCCchh--hCchHHHHHHHHHHHHHHHh
Confidence 87776654422 3579999999999875 333 23444555554443
No 106
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.76 E-value=2.6e-16 Score=176.65 Aligned_cols=291 Identities=12% Similarity=0.154 Sum_probs=190.4
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (752)
.|.+++..+ ...+.+.+.. ..+...+|+|||+.|+..+ ....|.+++.++.....+.....
T Consensus 285 ~i~~w~~~~----~~~~~~~~h~--~~v~~~~~~~~~~~l~t~~----------~d~~i~~w~~~~~~~~~~~~~~~--- 345 (577)
T 2ymu_A 285 TVKLWNRNG----QLLQTLTGHS--SSVWGVAFSPDGQTIASAS----------DDKTVKLWNRNGQHLQTLTGHSS--- 345 (577)
T ss_dssp CEEEEETTS----CEEEEECCCS--SCEEEEEECTTSSEEEEEE----------TTSCEEEEETTSCEEEEECCCSS---
T ss_pred EEEEEeCCC----cEEEEEecCC--CCeEEEEECCCCCEEEEEe----------CCCeEEEEeCCCCeeEEEeCCCC---
Confidence 455666544 4444444332 2478899999999998864 33567888888777776654333
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccC
Q 004456 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (752)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~ 165 (752)
.+..++|+|||+.|+....+ +.|.+++.+
T Consensus 346 --~v~~~~~s~~g~~l~~~~~d-------------------------------------------------g~v~~~~~~ 374 (577)
T 2ymu_A 346 --SVWGVAFSPDGQTIASASDD-------------------------------------------------KTVKLWNRN 374 (577)
T ss_dssp --CEEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEETT
T ss_pred --CEEEEEECCCCCEEEEEeCC-------------------------------------------------CEEEEEcCC
Confidence 35678999999999876321 467778887
Q ss_pred C-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccc
Q 004456 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (752)
Q Consensus 166 G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (752)
+ ....+..+ ..+..++|||||++|+....+. .+.+|+.+++....+......
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~-------------~v~~~~~~~~~~~~~~~~~~~------------- 428 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK-------------TVKLWNRNGQLLQTLTGHSSS------------- 428 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETTS-------------EEEEECTTCCEEEEEECCSSC-------------
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCC-------------EEEEEeCCCCEEEEecCCCCC-------------
Confidence 6 34444444 7788999999999998876553 789999887766665544322
Q ss_pred ccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCc
Q 004456 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (752)
Q Consensus 244 ~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 323 (752)
+..++|+||++. |+... ..+.+.+++. ++.....+......+..++|||||+.|+... ..
T Consensus 429 v~~~~~s~d~~~-l~~~~------------~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~----~d 488 (577)
T 2ymu_A 429 VWGVAFSPDDQT-IASAS------------DDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS----DD 488 (577)
T ss_dssp EEEEEECTTSSE-EEEEE------------TTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEE----TT
T ss_pred eEEEEECCCCCE-EEEEc------------CCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe----CC
Confidence 668999999997 55553 3346888887 5555566666777889999999999998876 33
Q ss_pred eeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecC
Q 004456 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 403 (752)
Q Consensus 324 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~ 403 (752)
..|.+++..+. ....+..+. . ..-.++|||||++|+....+ | .|.+||..
T Consensus 489 ~~i~iw~~~~~--~~~~~~~h~-~------~v~~l~~s~dg~~l~s~~~d-------------g--------~v~lwd~~ 538 (577)
T 2ymu_A 489 KTVKLWNRNGQ--LLQTLTGHS-S------SVRGVAFSPDGQTIASASDD-------------K--------TVKLWNRN 538 (577)
T ss_dssp SEEEEEETTSC--EEEEEECCS-S------CEEEEEECTTSSCEEEEETT-------------S--------EEEEECTT
T ss_pred CEEEEEcCCCC--EEEEEeCCC-C------CEEEEEEcCCCCEEEEEECc-------------C--------EEEEEeCC
Confidence 45777776542 222222111 1 11126799999999877622 1 48888864
Q ss_pred CCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 404 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 404 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
+.....+..-.. .+.. ++|||||+.|+-.. .. ..|++||
T Consensus 539 ~~~~~~~~~h~~-----~v~~-------~~fs~dg~~l~s~~-~D---~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTLTGHSS-----SVWG-------VAFSPDGQTIASAS-SD---KTVKLWN 577 (577)
T ss_dssp SCEEEEEECCSS-----CEEE-------EEECTTSSCEEEEE-TT---SCEEEEC
T ss_pred CCEEEEEcCCCC-----CEEE-------EEEcCCCCEEEEEe-CC---CEEEEeC
Confidence 333333321111 1233 58999999886533 22 2366664
No 107
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.5e-16 Score=182.97 Aligned_cols=298 Identities=11% Similarity=0.045 Sum_probs=183.6
Q ss_pred eeEEeecCCCCCCCCceeecC---CCCCc--eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 6 GIGIHRLLPDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~---~~~~~--~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
.||+++..+ |+.+.|.. +..+. .+..++|||||++|||++.. ..+...+||++++++|+.++++..
T Consensus 99 ~l~~~~~~~----~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-----~G~~~~~i~v~d~~tg~~~~~~~~ 169 (710)
T 2xdw_A 99 VLYVQDSLE----GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-----SGSDWVTIKFMKVDGAKELPDVLE 169 (710)
T ss_dssp EEEEESSTT----SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-----TTCSCEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCC----CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-----CCCceEEEEEEECCCCCCCccccc
Confidence 467776655 66666532 22222 57889999999999998752 112234999999999998876432
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
.. .+..++|||||+.|+|++........ .+.. .. .....+||
T Consensus 170 ~~-----~~~~~~wspDg~~l~~~~~~~~~~~~------~~~~---~~------------------------~~~~~~v~ 211 (710)
T 2xdw_A 170 RV-----KFSCMAWTHDGKGMFYNAYPQQDGKS------DGTE---TS------------------------TNLHQKLY 211 (710)
T ss_dssp EE-----CSCCEEECTTSSEEEEEECCCCSSCC------SSSC---CC------------------------CCCCCEEE
T ss_pred Cc-----ccceEEEEeCCCEEEEEEECCccccc------cccc---cc------------------------cCCCCEEE
Confidence 21 24578999999999998654321100 0000 00 00226899
Q ss_pred EEcc-CCCc--cccCCc----cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC------c--eeEEec
Q 004456 161 LGSL-DGTA--KDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------K--LVRELC 225 (752)
Q Consensus 161 ~~~~-~G~~--~~l~~~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~--~~~~l~ 225 (752)
++++ ++.. +.+... .....+.|||||++|++.+.... ....+++++|+++ + ..+.+.
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC--------DPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS--------SSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC--------CCccEEEEEECcccccccCCccceEEee
Confidence 9999 4432 233222 33568999999999999876431 1125899999876 4 345554
Q ss_pred CCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC---CeEEeeccc--c
Q 004456 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDL--R 300 (752)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~~~--~ 300 (752)
..... . ...|+|||+. |++.+..+ ..+..|+++++ +++. .+.++.... .
T Consensus 284 ~~~~~-------------~-~~~~s~dg~~-l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 284 DNFEG-------------E-YDYVTNEGTV-FTFKTNRH--------SPNYRLINIDF---TDPEESKWKVLVPEHEKDV 337 (710)
T ss_dssp CSSSS-------------C-EEEEEEETTE-EEEEECTT--------CTTCEEEEEET---TSCCGGGCEEEECCCSSCE
T ss_pred CCCCc-------------E-EEEEeccCCE-EEEEECCC--------CCCCEEEEEeC---CCCCcccceeccCCCCCCe
Confidence 43211 1 2369999998 88876332 13457999998 4433 356665433 5
Q ss_pred eeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceE
Q 004456 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (752)
Q Consensus 301 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~ 380 (752)
+..++|++++ .|++....+ ...+|+++++.++ .....+... .... -.++++||++.|++....
T Consensus 338 ~~~~~~~~~~-~lv~~~~~~-g~~~l~~~~~~~g-~~~~~l~~~-~~~v------~~~~~s~d~~~l~~~~ss------- 400 (710)
T 2xdw_A 338 LEWVACVRSN-FLVLCYLHD-VKNTLQLHDLATG-ALLKIFPLE-VGSV------VGYSGQKKDTEIFYQFTS------- 400 (710)
T ss_dssp EEEEEEETTT-EEEEEEEET-TEEEEEEEETTTC-CEEEEECCC-SSEE------EEEECCTTCSEEEEEEEC-------
T ss_pred EEEEEEEcCC-EEEEEEEEC-CEEEEEEEECCCC-CEEEecCCC-CceE------EEEecCCCCCEEEEEEeC-------
Confidence 6778899655 465555333 4567999998553 222333221 1111 115689999988877522
Q ss_pred EEEccCCCCCCCCCCeeEEEecCCCc--eeEEe
Q 004456 381 ILLNGRGFTPEGNIPFLDLFDINTGS--KERIW 411 (752)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~ 411 (752)
......||++|+.+|+ .+.+.
T Consensus 401 ----------~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 401 ----------FLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp ----------SSCCCEEEEEETTSSSCCCEEEE
T ss_pred ----------CCCCCEEEEEECCCCccceEEee
Confidence 1334579999999888 55543
No 108
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.76 E-value=4.2e-16 Score=174.94 Aligned_cols=300 Identities=12% Similarity=0.143 Sum_probs=194.7
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (752)
.|.+++..+ .....+... ...+....|+|||+.|+... ....|.+++.++...+.+..+..
T Consensus 244 ~i~~w~~~~----~~~~~~~~~--~~~v~~v~~~~d~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~h~~--- 304 (577)
T 2ymu_A 244 TVKLWNRNG----QLLQTLTGH--SSSVNGVAFRPDGQTIASAS----------DDKTVKLWNRNGQLLQTLTGHSS--- 304 (577)
T ss_dssp CEEEECTTS----CEEEEECCC--SSCEEEEEECTTSSEEEEEE----------TTSCEEEEETTSCEEEEECCCSS---
T ss_pred EEEEEeCCC----CEEEEEecC--CCCEEEEEEcCCCCEEEEEe----------CCCEEEEEeCCCcEEEEEecCCC---
Confidence 355555433 333334322 23578899999999998863 33578888876665565543332
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccC
Q 004456 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (752)
Q Consensus 86 ~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~ 165 (752)
.+..++|+||++.|+..+.+ +.|.+++++
T Consensus 305 --~v~~~~~~~~~~~l~t~~~d-------------------------------------------------~~i~~w~~~ 333 (577)
T 2ymu_A 305 --SVWGVAFSPDGQTIASASDD-------------------------------------------------KTVKLWNRN 333 (577)
T ss_dssp --CEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEETT
T ss_pred --CeEEEEECCCCCEEEEEeCC-------------------------------------------------CeEEEEeCC
Confidence 46678999999998876321 467778886
Q ss_pred C-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccc
Q 004456 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (752)
Q Consensus 166 G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (752)
+ ....+..+ ..+..++|+|||+.|+....+. .+.+|+..++....+..... .
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-------------~v~~~~~~~~~~~~~~~~~~-------------~ 387 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDK-------------TVKLWNRNGQLLQTLTGHSS-------------S 387 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------------EEEEEETTCCEEEEEECCSS-------------C
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCC-------------EEEEEcCCCCEEEEecCCCC-------------C
Confidence 6 55555555 6788899999999998876553 78899988776666554332 2
Q ss_pred ccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCc
Q 004456 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (752)
Q Consensus 244 ~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 323 (752)
+..++|+|||+. |+... ..+.|.+++. .+.....+......+..++|+||++.|+... ..
T Consensus 388 v~~~~~s~dg~~-l~~~~------------~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----~d 447 (577)
T 2ymu_A 388 VRGVAFSPDGQT-IASAS------------DDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASAS----DD 447 (577)
T ss_dssp EEEEEECTTSSC-EEEEE------------TTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEE----TT
T ss_pred eEEEEECCCCCE-EEEEe------------CCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEc----CC
Confidence 678999999997 66553 2347888887 5555556666677788999999999998876 33
Q ss_pred eeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecC
Q 004456 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 403 (752)
Q Consensus 324 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~ 403 (752)
..|.++++.+. ....+..... ..-.++|||||++|+....+ ..|.+||..
T Consensus 448 ~~v~~w~~~~~--~~~~~~~~~~-------~v~~~~~spd~~~las~~~d---------------------~~i~iw~~~ 497 (577)
T 2ymu_A 448 KTVKLWNRNGQ--LLQTLTGHSS-------SVRGVAFSPDGQTIASASDD---------------------KTVKLWNRN 497 (577)
T ss_dssp SEEEEEETTSC--EEEEEECCSS-------CEEEEEECTTSCEEEEEETT---------------------SEEEEEETT
T ss_pred CEEEEEECCCC--EEEEEcCCCC-------CEEEEEEcCCCCEEEEEeCC---------------------CEEEEEcCC
Confidence 35777776542 2222222111 11126799999999877632 148888864
Q ss_pred CCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEe
Q 004456 404 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (752)
Q Consensus 404 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~l 467 (752)
++..+....... .+.. ++|||||++|+.... ...|++||..+.....+
T Consensus 498 -~~~~~~~~~h~~----~v~~-------l~~s~dg~~l~s~~~----dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 498 -GQLLQTLTGHSS----SVRG-------VAFSPDGQTIASASD----DKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp -SCEEEEEECCSS----CEEE-------EEECTTSSCEEEEET----TSEEEEECTTSCEEEEE
T ss_pred -CCEEEEEeCCCC----CEEE-------EEEcCCCCEEEEEEC----cCEEEEEeCCCCEEEEE
Confidence 444332222111 1233 489999998865432 24588898654333333
No 109
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.76 E-value=5.4e-18 Score=170.47 Aligned_cols=200 Identities=12% Similarity=0.067 Sum_probs=135.3
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH----HhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHH
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF----LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSA 586 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~ 586 (752)
++.|+||++|||++..+.. ....+..++..| ++.||.|++++++ +.+.. .....++|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~----------~~~~~~~~~~~L~~~a~~~g~~vi~~d~r---~~~~~-----~~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN----------TPNDFNQLANTIKSMDTESTVCQYSIEYR---LSPEI-----TNPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC----------CGGGGHHHHHHHHHHCTTCCEEEEEECCC---CTTTS-----CTTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC----------ChHHHHHHHHHHhhhhccCCcEEEEeecc---cCCCC-----CCCcHHHHH
Confidence 3589999999987542110 011122345566 5899999996654 32221 123457788
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----------------CCceeEEEEccCCCCCCCCccCccc-
Q 004456 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----------------PHLFCCGIARSGSYNKTLTPFGFQT- 648 (752)
Q Consensus 587 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----------------p~~~~~~v~~~~~~~~~~~~~~~~~- 648 (752)
.++++++.++ ++.++|+|+||||||++|+.++.+. |++++++|+++|..+..........
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 8999999876 4668999999999999999999885 7789999999987652110000000
Q ss_pred ---------cccchhh-hHHHHHhcChhh--hcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004456 649 ---------EFRTLWE-ATNVYIEMSPIT--HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 716 (752)
Q Consensus 649 ---------~~~~~~~-~~~~~~~~~~~~--~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 716 (752)
.....|. ... ..++.. ....+++|+|++||++|.++| +.++++++++++..+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEPS---RVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCHH---HHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhccc---ccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 0000011 000 001100 122367999999999999999 99999999999999999999999999
Q ss_pred CccCCccccHHHHHHHHHHHH
Q 004456 717 HHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 717 ~H~~~~~~~~~~~~~~~~~fl 737 (752)
+|.+.. +. .++.+.+.+||
T Consensus 254 gH~~~~-~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDVY-KN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGGG-GC-HHHHHHHHHTC
T ss_pred cccccc-cC-hHHHHHHHHHc
Confidence 998753 33 66777777775
No 110
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.75 E-value=2e-17 Score=169.19 Aligned_cols=226 Identities=16% Similarity=0.144 Sum_probs=143.7
Q ss_pred eEEEEEE---cCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 482 KEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 482 ~~~~~~~---~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
...++|. ..++..+.++++.|++.. .+.|+||++||+++.. ..+ ...+...++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~-----------~~~---~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNG-----------ADY---RDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCH-----------HHH---HHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCH-----------HHH---HHHHHHHHHHCCcEE
Confidence 4456665 567889999999998642 2479999999975321 011 013456778899999
Q ss_pred EecCCCCC---------CCC--CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-c
Q 004456 559 LAGPSIPI---------IGE--GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-L 626 (752)
Q Consensus 559 ~~~~~~~~---------~g~--g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-~ 626 (752)
++++++.. .|+ |.+..........+.|+.++++++.++..+|.++|+|+||||||++++.++.++|+ .
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99766421 022 33322211222334678899999998877889999999999999999999999985 7
Q ss_pred eeEEEEcc-CCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCC---------------
Q 004456 627 FCCGIARS-GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF--------------- 690 (752)
Q Consensus 627 ~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~--------------- 690 (752)
++++|+.. |..+.......+..... .. ..++......+++|+|++||++|..+..+
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLD-GV-------GLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSB-TT-------TCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCccccC-CC-------CCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88888655 55442211100000000 00 01222222334689999999999874100
Q ss_pred HHHHHHHHHHHH----hCCCc--EEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 691 PMQAERFFDALK----GHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 691 ~~~~~~~~~~l~----~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
...++++++.++ +.+.+ ++++++|+++|.+. .....+.+||.+
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhh
Confidence 234566667665 55665 89999999999853 345567777654
No 111
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=1.7e-17 Score=186.45 Aligned_cols=264 Identities=9% Similarity=-0.009 Sum_probs=171.4
Q ss_pred eEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEc--ccCcceeccCCCCcc
Q 004456 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDIC 84 (752)
Q Consensus 7 i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~--~~g~~~~lt~~~~~~ 84 (752)
+.++.+++ |+.++++.... ..+..|.|||| +|+|++.. ........||++++ +++.. +++....
T Consensus 46 ~~lw~~~~----g~~~~lt~~~~-~~~~~~~~spd--~~l~~~~~----~~g~~~~~l~~~~~~~~g~~~-~l~~~~~-- 111 (582)
T 3o4h_A 46 VNAYLYDG----GETVKLNREPI-NSVLDPHYGVG--RVILVRDV----SKGAEQHALFKVNTSRPGEEQ-RLEAVKP-- 111 (582)
T ss_dssp EEEEEEET----TEEEECCSSCC-SEECEECTTCS--EEEEEEEC----STTSCCEEEEEEETTSTTCCE-ECTTSCS--
T ss_pred eeEEEEcC----CCcEeeecccc-cccccccCCCC--eEEEEecc----CCCCcceEEEEEeccCCCccc-cccCCCC--
Confidence 44555666 88889885432 25889999999 67786542 11133468999998 55544 6765443
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
....+|||||+.++|++... ..+.++++
T Consensus 112 ----~~~~~~s~dg~~~~~~s~~~------------------------------------------------~~~~l~d~ 139 (582)
T 3o4h_A 112 ----MRILSGVDTGEAVVFTGATE------------------------------------------------DRVALYAL 139 (582)
T ss_dssp ----BEEEEEEECSSCEEEEEECS------------------------------------------------SCEEEEEE
T ss_pred ----ceeeeeCCCCCeEEEEecCC------------------------------------------------CCceEEEc
Confidence 33569999999888874321 23336688
Q ss_pred -CCCccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccc
Q 004456 165 -DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (752)
Q Consensus 165 -~G~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (752)
+|+.++++.... ..+.|||||++|++.+.+... ...|++||+++++.+.++.....
T Consensus 140 ~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~~------------- 196 (582)
T 3o4h_A 140 DGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEGS------------- 196 (582)
T ss_dssp ETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSCE-------------
T ss_pred cCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCCc-------------
Confidence 667777765533 789999999999998766321 13699999998888887655433
Q ss_pred ccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeee--------eecCCceEEE
Q 004456 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVS--------WCDDSLALVN 315 (752)
Q Consensus 244 ~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~spDg~~l~~ 315 (752)
+..++|||||+. |+ .+.. .....|+++|+ ++++.+.+......+..++ ||||| .+++
T Consensus 197 ~~~~~~SpDG~~-l~-~~~~---------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~ 261 (582)
T 3o4h_A 197 FSSASISPGMKV-TA-GLET---------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAV 261 (582)
T ss_dssp EEEEEECTTSCE-EE-EEEC---------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEE
T ss_pred cccceECCCCCE-EE-EccC---------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEE
Confidence 567899999997 66 3321 12237999998 5666664444455566677 99999 6777
Q ss_pred eeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCC
Q 004456 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (752)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (752)
....+ +..+||.+ + .. ......... .++|| ||+.++..+.. ...+
T Consensus 262 ~~~~~-g~~~l~~~---g--~~-~~~~~~~v~---------~~~~s-dg~~l~~~s~~------------------~~p~ 306 (582)
T 3o4h_A 262 VARRE-GRSAVFID---G--ER-VEAPQGNHG---------RVVLW-RGKLVTSHTSL------------------STPP 306 (582)
T ss_dssp EEEET-TEEEEEET---T--EE-ECCCSSEEE---------EEEEE-TTEEEEEEEET------------------TEEE
T ss_pred EEEcC-CcEEEEEE---C--Ce-eccCCCceE---------EEEec-CCEEEEEEcCC------------------CCCC
Confidence 66444 34456665 3 11 111111111 26688 99877655422 2345
Q ss_pred eeEEEecCCCceeEE
Q 004456 396 FLDLFDINTGSKERI 410 (752)
Q Consensus 396 ~l~~~d~~~g~~~~l 410 (752)
.|+++|..+ +.++|
T Consensus 307 ~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 307 RIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEETTCC-EEECC
T ss_pred eEEEEcCCC-ceEEE
Confidence 688998765 55555
No 112
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.75 E-value=6.4e-17 Score=157.15 Aligned_cols=197 Identities=15% Similarity=0.123 Sum_probs=137.1
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
++..+...++.|.. .+.|+||++||.+... .. +..+...|++ ||.|++++.....+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~~-----------~~----~~~~~~~l~~-~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVDE-----------TT----LVPLARRIAP-TATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBCT-----------TT----THHHHHHHCT-TSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCCH-----------HH----HHHHHHhcCC-CceEEEeCCCCCcCCc
Confidence 34456666554432 1249999999964211 11 1234455554 9999995532100001
Q ss_pred CCC--------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004456 571 DKL--------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 642 (752)
Q Consensus 571 ~~~--------~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~ 642 (752)
... ..........+++.+.++++.++..++.++++|+||||||.+|+.++.++|++++++|+++|.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 151 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV 151 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc
Confidence 110 111234456777888888887765578899999999999999999999999999999999986542100
Q ss_pred ccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc
Q 004456 643 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 722 (752)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 722 (752)
......++|+|++||++|.++| ...++ +++.+++.+.++++++++ ++|.+..
T Consensus 152 ------------------------~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~ 203 (223)
T 3b5e_A 152 ------------------------PATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD 203 (223)
T ss_dssp ------------------------CCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH
T ss_pred ------------------------ccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcCH
Confidence 0123357899999999999998 89999 999999998899999999 9998752
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 004456 723 RENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 723 ~~~~~~~~~~~~~fl~~~l~ 742 (752)
+..+.+.+||++.+.
T Consensus 204 -----~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 204 -----PDAAIVRQWLAGPIA 218 (223)
T ss_dssp -----HHHHHHHHHHHCC--
T ss_pred -----HHHHHHHHHHHhhhh
Confidence 335688999987653
No 113
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.75 E-value=2.9e-16 Score=157.90 Aligned_cols=282 Identities=9% Similarity=0.082 Sum_probs=193.8
Q ss_pred eeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 004456 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (752)
Q Consensus 35 ~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~ 114 (752)
.--+++||++|+|... .+...||.++.+|+..++|+... .--++++|++|+|.........
T Consensus 18 ~g~~~~~g~~iy~~n~--------~d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~~-- 78 (302)
T 3s25_A 18 AGLFCESDGEVFFSNT--------NDNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKIT-- 78 (302)
T ss_dssp TTCEEEETTEEEEEEG--------GGTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC------
T ss_pred ceEEEEeCCEEEEEeC--------CCCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCccc--
Confidence 3457899999999653 23578999999999999996431 1257899999999855321100
Q ss_pred CccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCccceeccccCCCCceEEEEe
Q 004456 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITS 193 (752)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~~~~~~~~~SpDGk~l~~~~ 193 (752)
....+. .....||+++++| +.++|+... ...|+|+|++|+|..
T Consensus 79 --------------------------------~~~~~~-~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~~~ 122 (302)
T 3s25_A 79 --------------------------------SQTFFS-YDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYYLH 122 (302)
T ss_dssp ----------------------------------CCSS-CCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEEEE
T ss_pred --------------------------------ccceec-cCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEEEe
Confidence 000000 0226899999987 666666442 227899999999986
Q ss_pred cccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccC
Q 004456 194 MHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (752)
Q Consensus 194 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~ 273 (752)
.... -...|+..++++.+.++|+.... ..|+|+|+. |||+..
T Consensus 123 ~~~~---------~~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~-iy~t~~----------- 164 (302)
T 3s25_A 123 YDTQ---------TATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRY-FYYNNP----------- 164 (302)
T ss_dssp ESSS---------SCEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTE-EEEECT-----------
T ss_pred ecCC---------CCceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCE-EEEEeC-----------
Confidence 2110 02489999999998888887642 267999998 999952
Q ss_pred ccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCC
Q 004456 274 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 353 (752)
Q Consensus 274 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 353 (752)
....|+++++ +++..+.|.... ...+ ++|++++|+|..+... .+|+++++++ +..+.|++...
T Consensus 165 g~~~Iy~~~l---~g~~~~~l~~~~--~~~~-~~P~g~~iy~t~~~~~--~~I~~~~ldG--~~~~~Lt~~~~------- 227 (302)
T 3s25_A 165 KNGQLYRYDT---ASQSEALFYDCN--CYKP-VVLDDTNVYYMDVNRD--NAIVHVNINN--PNPVVLTEANI------- 227 (302)
T ss_dssp TTCCEEEEET---TTTEEEEEECSC--EEEE-EEEETTEEEEEEGGGT--TEEEEECSSS--CCCEECSCSCE-------
T ss_pred CCceEEEEEC---CCCCEEEEeCCC--ccce-eeecCCEEEEEEcCCC--cEEEEEECCC--CCeEEEeCCCc-------
Confidence 2347999998 677767775432 2233 5699999999875442 5799999998 45567765433
Q ss_pred CCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCccee
Q 004456 354 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 433 (752)
Q Consensus 354 ~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 433 (752)
..++|+|++|+|... .....|+.+++++...++|...+. .+
T Consensus 228 ----~~~~~~g~~Iy~~~~-------------------~~~~~i~~~~~DG~~r~~l~~~~~----------------~~ 268 (302)
T 3s25_A 228 ----EHYNVYGSLIFYQRG-------------------GDNPALCVVKNDGTGFKELAKGEF----------------CN 268 (302)
T ss_dssp ----EEEEEETTEEEEEEC-------------------SSSCEEEEEETTSCCCEEEEESCE----------------EE
T ss_pred ----ceEEECCCEEEEEEC-------------------CCCcEEEEEECCCCccEEeeCCcc----------------ce
Confidence 227999999988751 122479999998777777765431 14
Q ss_pred cccCCCEEEEEEecCCCCcEEEEEECCCCCeeEee
Q 004456 434 INLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (752)
Q Consensus 434 ~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt 468 (752)
+++-+++|+|+..... .|+++++++....+|.
T Consensus 269 i~i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 269 INVTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp EEECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred EEEeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 5667899999875433 4899988775555554
No 114
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.74 E-value=2.6e-16 Score=163.41 Aligned_cols=247 Identities=15% Similarity=0.118 Sum_probs=154.7
Q ss_pred CCCceEEEEEEcCC--C--cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-
Q 004456 478 ASLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL- 552 (752)
Q Consensus 478 ~~~~~~~~~~~~~~--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 552 (752)
......++.|.+.+ | ..+.+++++|.+. .++.|+|++.||.+... .+.+.........++..|+
T Consensus 39 ~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~~~-------~~~ps~~~~~~~~~~~~lal 107 (377)
T 4ezi_A 39 YDLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRFER-------NDVPSRNNEKNYIYLAAYGN 107 (377)
T ss_dssp CCEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCCST-------TCSGGGCCGGGHHHHHHHTT
T ss_pred CCcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcCCc-------ccCCCcCcccchHHHHHHHH
Confidence 34567778888765 3 3578999999873 24689999999975210 1111100000123455778
Q ss_pred hCCcEEEecCCCCCCCCCCCCC-Cchh--H---HHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004456 553 ARRFAVLAGPSIPIIGEGDKLP-NDRF--V---EQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (752)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~-~~~~--~---~~~~~d~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~ 625 (752)
++||+|+++|+ +|+|.+.. ...+ . ...+.|..+++..+.+ .+..+.++|+++||||||++++.++..+|+
T Consensus 108 ~~Gy~Vv~~D~---rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~ 184 (377)
T 4ezi_A 108 SAGYMTVMPDY---LGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAK 184 (377)
T ss_dssp TTCCEEEEECC---TTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred hCCcEEEEeCC---CCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhh
Confidence 99999999554 45555432 1111 1 1223344444433333 333356899999999999999999887543
Q ss_pred -----ceeEEEEccCCCCCCCC-------c--c-----C------------ccc------ccc------------c----
Q 004456 626 -----LFCCGIARSGSYNKTLT-------P--F-----G------------FQT------EFR------------T---- 652 (752)
Q Consensus 626 -----~~~~~v~~~~~~~~~~~-------~--~-----~------------~~~------~~~------------~---- 652 (752)
.+++++..++.+|.... . . + ++. ... .
T Consensus 185 ~~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 4ezi_A 185 EYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEI 264 (377)
T ss_dssp HCTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHH
T ss_pred hCCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhh
Confidence 58899998887662100 0 0 0 000 000 0
Q ss_pred ---------hhhhHH---HHHh-cCh-hhh------c--CCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEE
Q 004456 653 ---------LWEATN---VYIE-MSP-ITH------A--NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 710 (752)
Q Consensus 653 ---------~~~~~~---~~~~-~~~-~~~------~--~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~ 710 (752)
.+.... .+.. ..| +.. + ..+++|+|++||++|.+|| +.+++++++++++.|. +++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~ 341 (377)
T 4ezi_A 265 LQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVW 341 (377)
T ss_dssp HHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEE
T ss_pred hhccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEE
Confidence 000000 0000 111 110 1 2457999999999999999 9999999999999999 999
Q ss_pred EEeCC--CCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 711 VLLPF--EHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 711 ~~~~~--~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+.+++ .+|... .......+++||++++.+..
T Consensus 342 ~~~~~~~~~H~~~----~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 342 IKSVSDALDHVQA----HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp EEESCSSCCTTTT----HHHHHHHHHHHHHHHHTSSC
T ss_pred EEcCCCCCCccCh----HHHHHHHHHHHHHHhhcchh
Confidence 99999 899754 45677889999999997654
No 115
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.74 E-value=5.7e-17 Score=165.30 Aligned_cols=242 Identities=14% Similarity=0.078 Sum_probs=153.2
Q ss_pred CceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
..++.+++.+. .+..+.++ +.|.. .++|+||++||++.. ++...|... ......+++.||.|
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~~p~~------~~~p~vvllHG~~~~---------~~~~~w~~~-~~~~~~~~~~~~~v 69 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-FQSGG------ANSPALYLLDGLRAQ---------DDFSGWDIN-TPAFEWYDQSGLSV 69 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------TTBCEEEEECCTTCC---------SSSCHHHHH-CCHHHHHTTSSCEE
T ss_pred ceEEEEEEECccCCCceEEE-ECCCC------CCCCEEEEeCCCCCC---------CCcchhhcC-CCHHHHHhcCCeEE
Confidence 45677787765 35567766 44432 248999999996310 000111110 01234566789999
Q ss_pred EecCCCCCCCCCCCCC---------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 559 LAGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~---------~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
++++.....++..... ...+.....++ ++.++.++..+++++++|+|+||||++|+.++.++|++|++
T Consensus 70 v~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~ 146 (304)
T 1sfr_A 70 VMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSE---LPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVY 146 (304)
T ss_dssp EEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTH---HHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEE
T ss_pred EEECCCCCccccccCCccccccccccccHHHHHHHH---HHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeE
Confidence 9966532222211101 11122222233 44444443346777999999999999999999999999999
Q ss_pred EEEccCCCCCCCCccCc------c----ccccchhh--hHHHHHhcChhhhcCCC---CCCEEEEEeCCCC---------
Q 004456 630 GIARSGSYNKTLTPFGF------Q----TEFRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD--------- 685 (752)
Q Consensus 630 ~v~~~~~~~~~~~~~~~------~----~~~~~~~~--~~~~~~~~~~~~~~~~~---~~P~li~~G~~D~--------- 685 (752)
+|+++|..+.....+.. . ......|. ....+...+|...+.++ .+|+++++|+.|.
T Consensus 147 ~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~ 226 (304)
T 1sfr_A 147 AGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLP 226 (304)
T ss_dssp EEEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHH
T ss_pred EEEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccc
Confidence 99999987643211000 0 00000000 11234555665544443 5899999999998
Q ss_pred -----CCCCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCCC
Q 004456 686 -----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 686 -----~v~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
.++ ..++++++++|++.| .++++.+|++++|.+ ..+...+..++.||.++|+.++.
T Consensus 227 ~~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~---~~w~~~l~~~l~~l~~~l~~~~~ 288 (304)
T 1sfr_A 227 AKFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSW---EYWGAQLNAMKPDLQRALGATPN 288 (304)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSH---HHHHHHHHHTHHHHHHHHTCCCC
T ss_pred cchhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCH---HHHHHHHHHHHHHHHHhcCCCcc
Confidence 566 889999999999999 999999998779974 33566778899999999986543
No 116
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.74 E-value=1.1e-17 Score=165.82 Aligned_cols=181 Identities=15% Similarity=0.078 Sum_probs=129.4
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCC---------CchhHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 582 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 582 (752)
+.|+||++||.+... .. +..++..|++ +|.|++++ .+..|.|.+.. ........
T Consensus 61 ~~p~vv~~HG~~~~~-----------~~----~~~~~~~l~~-~~~v~~~~-~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDE-----------NQ----FFDFGARLLP-QATILSPV-GDVSEHGAARFFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp TSCEEEEECCTTCCH-----------HH----HHHHHHHHST-TSEEEEEC-CSEEETTEEESSCBCGGGCBCHHHHHHH
T ss_pred CCcEEEEEeCCCCCH-----------hH----HHHHHHhcCC-CceEEEec-CCcCCCCCcccccCCCCCcCCHHHHHHH
Confidence 479999999964211 11 1123445554 59999953 24555554311 11223345
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHh
Q 004456 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 662 (752)
Q Consensus 583 ~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (752)
.+|+.+.++++.++. +.++++|+||||||++++.++.++|++++++|+++|..+...
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 677778888776653 568999999999999999999999999999999999754321
Q ss_pred cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 663 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 663 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
......+++|+|+++|++|..+| +.+++++++++++.+.++++ ++++++|.+. .+..+.+.+||.++|+
T Consensus 181 ---~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ---KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ---CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ---cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 01123457899999999999999 99999999999987777776 5667899874 2345789999999886
Q ss_pred C
Q 004456 743 S 743 (752)
Q Consensus 743 ~ 743 (752)
+
T Consensus 250 ~ 250 (251)
T 2r8b_A 250 G 250 (251)
T ss_dssp -
T ss_pred C
Confidence 3
No 117
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.74 E-value=1.2e-16 Score=160.30 Aligned_cols=212 Identities=16% Similarity=0.128 Sum_probs=135.4
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++....+- . .|.||++||.+.. ...+......|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~---------------~~~w~~~~~~l~~~g~~vi~---~D~ 54 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLD---------------ADMWEYQMEYLSSRGYRTIA---FDR 54 (271)
T ss_dssp EECTTSCEEEEEEES--------S--SSEEEEECCTTCC---------------GGGGHHHHHHHHTTTCEEEE---ECC
T ss_pred EEcCCCCEEEEEccC--------C--CCeEEEECCCCCc---------------HHHHHHHHHHHHhCCceEEE---ecC
Confidence 456788888766652 1 3568899996321 11122356678889999999 556
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCC-
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLT- 642 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~p~~~~~~v~~~~~~~~~~~- 642 (752)
+|+|.+..+ ........+|+.+.++.+ +.+++.|+||||||++++.+++. .|++++++|++++.......
T Consensus 55 ~G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~ 128 (271)
T 3ia2_A 55 RGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQK 128 (271)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCB
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCC
Confidence 677777433 234566677777777766 23689999999999877666554 58999999998864321100
Q ss_pred ---ccCccccc-----cchhh--------------------------------------------hHHHHHhcChhhhcC
Q 004456 643 ---PFGFQTEF-----RTLWE--------------------------------------------ATNVYIEMSPITHAN 670 (752)
Q Consensus 643 ---~~~~~~~~-----~~~~~--------------------------------------------~~~~~~~~~~~~~~~ 670 (752)
+.+..... ..... ....+...+....+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (271)
T 3ia2_A 129 PDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMA 208 (271)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHT
T ss_pred CCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCccccc
Confidence 00000000 00000 000001111223356
Q ss_pred CCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 671 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 671 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
++++|+|+++|++|.++| +..+.++.+.+. ...++++++++||.+. .+.++.+.+.+.+||.
T Consensus 209 ~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 209 KIDVPTLVIHGDGDQIVP--FETTGKVAAELI---KGAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCCcCC--hHHHHHHHHHhC---CCceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 789999999999999998 776544444432 3468999999999865 5667888899999985
No 118
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=1e-15 Score=158.51 Aligned_cols=298 Identities=10% Similarity=0.013 Sum_probs=177.5
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~ 115 (752)
+.|+++++++..+. .....|+++++++++.......... .. .+.|+|||+.|+++..
T Consensus 3 ~~~~~~~~~~~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~--------- 59 (331)
T 3u4y_A 3 AMFQTTSNFGIVVE---------QHLRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSD--------- 59 (331)
T ss_dssp ----CCCCEEEEEE---------GGGTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEES---------
T ss_pred eeEcCCCCEEEEEe---------cCCCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeC---------
Confidence 56788887765543 3447999999999887655443321 24 7899999998887632
Q ss_pred ccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc--cccCCccceec-cccCCCCceEEE
Q 004456 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--KDFGTPAVYTA-VEPSPDQKYVLI 191 (752)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~--~~l~~~~~~~~-~~~SpDGk~l~~ 191 (752)
....|+++|+ +|+. ..+........ ++|||||++|+
T Consensus 60 ---------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~- 99 (331)
T 3u4y_A 60 ---------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV- 99 (331)
T ss_dssp ---------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-
T ss_pred ---------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-
Confidence 1158999999 6653 33333344555 99999999998
Q ss_pred EecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccc
Q 004456 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (752)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~ 271 (752)
...... -...|++||+.+++......... .+..++|+|||++ |+++...
T Consensus 100 ~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~~-------------~~~~~~~spdg~~-l~~~~~~-------- 148 (331)
T 3u4y_A 100 TVTGLN---------HPFNMQSYSFLKNKFISTIPIPY-------------DAVGIAISPNGNG-LILIDRS-------- 148 (331)
T ss_dssp ECCCSS---------SSCEEEEEETTTTEEEEEEECCT-------------TEEEEEECTTSSC-EEEEEET--------
T ss_pred EecCCC---------CcccEEEEECCCCCeEEEEECCC-------------CccceEECCCCCE-EEEEecC--------
Confidence 433321 01279999998876655433221 1457999999998 7766432
Q ss_pred cCccce-EEeccCCCCCCCCC----eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccc
Q 004456 272 VSPRDI-IYTQPAEPAEGEKP----EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (752)
Q Consensus 272 ~~~~~~-l~~~~~~~~~~~~~----~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 346 (752)
.+. +.+++++ ..+.. ............++|+|||+.+++.... ...|+++++.++. ....+.....
T Consensus 149 ---~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~-~~~~~~~~~~ 219 (331)
T 3u4y_A 149 ---SANTVRRFKID--ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPE-NITLLNAVGT 219 (331)
T ss_dssp ---TTTEEEEEEEC--TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTT-SCEEEEEEEC
T ss_pred ---CCceEEEEEEC--CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCc-ccceeeeccC
Confidence 123 6666652 11222 1222333456788999999988776532 2368889988742 1011111111
Q ss_pred ccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeee
Q 004456 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (752)
Q Consensus 347 ~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (752)
.. ..-.++|||||++|++.... ...|+++|+++++.+.+......... .....
T Consensus 220 ~~-----~~~~~~~spdg~~l~v~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~ 272 (331)
T 3u4y_A 220 NN-----LPGTIVVSRDGSTVYVLTES--------------------TVDVFNFNQLSGTLSFVKSFGHGLLI--DPRPL 272 (331)
T ss_dssp SS-----CCCCEEECTTSSEEEEECSS--------------------EEEEEEEETTTTEEEEEEEEECCCCC--CCGGG
T ss_pred CC-----CCceEEECCCCCEEEEEEcC--------------------CCEEEEEECCCCceeeeccccccccc--CCCCc
Confidence 11 11236799999988877521 12488999999887655322110000 00000
Q ss_pred cCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 427 ~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
.....++|||||++|+++... ...|.++|+.+.....
T Consensus 273 ~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 273 FGANQMALNKTETKLFISANI---SRELKVFTISGKVVGY 309 (331)
T ss_dssp TTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCEEEE
T ss_pred ccccceEECCCCCEEEEecCC---CCcEEEEEecCCcccc
Confidence 011235899999998776543 3468889987655443
No 119
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.74 E-value=2.4e-15 Score=155.78 Aligned_cols=279 Identities=13% Similarity=0.111 Sum_probs=181.9
Q ss_pred CCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCccccccccceEEecCCcEEEEEecC
Q 004456 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (752)
Q Consensus 29 ~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~ 107 (752)
....+...+|||||++|+.. . ...|.++++++++... +...........+..+.|+||++.|+..+.
T Consensus 50 h~~~v~~~~~~~~~~~l~~~----------~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 117 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTG----------G-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE- 117 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEE----------C-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES-
T ss_pred CCCceEEEEEecCCcEEEEc----------C-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC-
Confidence 33468889999999999985 2 4789999988765322 211000001114678899999998887632
Q ss_pred CCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc---cccCCc-cceecccc
Q 004456 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEP 182 (752)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~---~~l~~~-~~~~~~~~ 182 (752)
.+.|.++++ +++. ..+..+ ..+..+.|
T Consensus 118 ------------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 118 ------------------------------------------------ASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp ------------------------------------------------SSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred ------------------------------------------------CCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 157888888 4442 223333 67889999
Q ss_pred CCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEe
Q 004456 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 183 SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~ 262 (752)
+|||+.|+....+. .+.+||+.+++........ ...+..+.|+|||+. |+...
T Consensus 150 ~~~~~~l~~~~~dg-------------~v~~~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~-l~~~~- 202 (337)
T 1gxr_A 150 SPDSKVCFSCCSDG-------------NIAVWDLHNQTLVRQFQGH------------TDGASCIDISNDGTK-LWTGG- 202 (337)
T ss_dssp CTTSSEEEEEETTS-------------CEEEEETTTTEEEEEECCC------------SSCEEEEEECTTSSE-EEEEE-
T ss_pred CCCCCEEEEEeCCC-------------cEEEEeCCCCceeeeeecc------------cCceEEEEECCCCCE-EEEEe-
Confidence 99999998876553 7999999877554332221 122678999999986 55553
Q ss_pred ccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecc
Q 004456 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (752)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 342 (752)
..+.+.++|+ ..+...........+..++|+||++.|++.. ....|+++++.++ +...+.
T Consensus 203 -----------~dg~i~~~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~~~~i~~~~~~~~--~~~~~~ 262 (337)
T 1gxr_A 203 -----------LDNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGM----ESSNVEVLHVNKP--DKYQLH 262 (337)
T ss_dssp -----------TTSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTSS--CEEEEC
T ss_pred -----------cCCcEEEEEC---CCCceEeeecCCCceEEEEECCCCCEEEEEc----CCCcEEEEECCCC--CeEEEc
Confidence 3447899998 4444444445667788999999999998876 3345888888774 222222
Q ss_pred ccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhce
Q 004456 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (752)
Q Consensus 343 ~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (752)
.... ....++|+|||++|+....+ ..|.+||+.+++......... .+
T Consensus 263 ~~~~-------~v~~~~~~~~~~~l~~~~~d---------------------g~i~~~~~~~~~~~~~~~~~~-----~v 309 (337)
T 1gxr_A 263 LHES-------CVLSLKFAYCGKWFVSTGKD---------------------NLLNAWRTPYGASIFQSKESS-----SV 309 (337)
T ss_dssp CCSS-------CEEEEEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSS-----CE
T ss_pred CCcc-------ceeEEEECCCCCEEEEecCC---------------------CcEEEEECCCCeEEEEecCCC-----cE
Confidence 1111 11136799999988877622 158999998887654432221 12
Q ss_pred eeeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
. .++|+||++.|+....+ ..|++|+
T Consensus 310 ~-------~~~~s~~~~~l~~~~~d----g~i~iw~ 334 (337)
T 1gxr_A 310 L-------SCDISVDDKYIVTGSGD----KKATVYE 334 (337)
T ss_dssp E-------EEEECTTSCEEEEEETT----SCEEEEE
T ss_pred E-------EEEECCCCCEEEEecCC----CeEEEEE
Confidence 2 24799999988765432 2366665
No 120
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.74 E-value=7.4e-17 Score=166.44 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=95.1
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeC
Q 004456 603 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGE 682 (752)
Q Consensus 603 ~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~ 682 (752)
+++++||||||.+++.++.++|++++++|+++|... ..+......+++|+|++||+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~~~~~~~~~~PvLii~G~ 254 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKPEDVKPLTSIPVLVVFGD 254 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCGGGCGGGTTSCEEEEECS
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCHHHHhhccCCCEEEEecc
Confidence 899999999999999999999999999999997531 00111122346999999999
Q ss_pred CCCCCCCCH-----HHHHHHHHHHHhCCCcEEEEEeCCCC-----ccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 683 VDDKVGLFP-----MQAERFFDALKGHGALSRLVLLPFEH-----HVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 683 ~D~~v~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
+|..+| . .+++++++.+++.|.++++++++++| |.+....+..++.+.+.+||++++..
T Consensus 255 ~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 255 HIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp SCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC-
T ss_pred CCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcccC
Confidence 999998 7 88999999999988899999999665 98775555788999999999998864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.74 E-value=1.1e-15 Score=162.38 Aligned_cols=270 Identities=9% Similarity=0.017 Sum_probs=182.1
Q ss_pred cCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 59 ~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
.....|+++++++++..+...... .+..+.|+|||+.|+++..
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~-------------------------------- 51 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANA-------------------------------- 51 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEG--------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECC--------------------------------
Confidence 445789999999888665544332 3568899999998877632
Q ss_pred hhccCChhhhhhhhhhcccEEEEEcc-CCCccc-cCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEec
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (752)
....|+++|+ +|+... +..+..+..++|||||++|++..... ..|++||+
T Consensus 52 ----------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------------~~v~v~d~ 103 (391)
T 1l0q_A 52 ----------------HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS------------STLSVIDT 103 (391)
T ss_dssp ----------------GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEET
T ss_pred ----------------CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCC------------CEEEEEEC
Confidence 1258999999 665443 33336788999999999998876543 47999999
Q ss_pred CCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee
Q 004456 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (752)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 296 (752)
.+++......... .+..++|+|||+. |+++.. ..+.|+++|+ .+++......
T Consensus 104 ~~~~~~~~~~~~~-------------~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~---~~~~~~~~~~ 155 (391)
T 1l0q_A 104 TSNTVAGTVKTGK-------------SPLGLALSPDGKK-LYVTNN-----------GDKTVSVINT---VTKAVINTVS 155 (391)
T ss_dssp TTTEEEEEEECSS-------------SEEEEEECTTSSE-EEEEET-----------TTTEEEEEET---TTTEEEEEEE
T ss_pred CCCeEEEEEeCCC-------------CcceEEECCCCCE-EEEEeC-----------CCCEEEEEEC---CCCcEEEEEe
Confidence 9887655443322 2568999999997 666642 3448999998 4444444444
Q ss_pred cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCC
Q 004456 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (752)
Q Consensus 297 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~ 376 (752)
.......++|+|||+.|++.... ...|+++|+.++ +......... ..-.++|+|||++|+....+
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~~~~g~~l~~~~~~--- 220 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTN--SVIDTVKVEA-------APSGIAVNPEGTKAYVTNVD--- 220 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEECSS-------EEEEEEECTTSSEEEEEEEC---
T ss_pred cCCCcceEEECCCCCEEEEEeCC---CCEEEEEECCCC--eEEEEEecCC-------CccceEECCCCCEEEEEecC---
Confidence 45566889999999988765422 246999998874 2222222111 11126799999999888631
Q ss_pred cceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEE
Q 004456 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 456 (752)
Q Consensus 377 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~ 456 (752)
.....|++||+.+++.......... + ..++|+|||+.|+++... ...|++
T Consensus 221 ---------------~~~~~v~~~d~~~~~~~~~~~~~~~-----~-------~~~~~s~dg~~l~~s~~~---d~~v~v 270 (391)
T 1l0q_A 221 ---------------KYFNTVSMIDTGTNKITARIPVGPD-----P-------AGIAVTPDGKKVYVALSF---XNTVSV 270 (391)
T ss_dssp ---------------SSCCEEEEEETTTTEEEEEEECCSS-----E-------EEEEECTTSSEEEEEETT---TTEEEE
T ss_pred ---------------cCCCcEEEEECCCCeEEEEEecCCC-----c-------cEEEEccCCCEEEEEcCC---CCEEEE
Confidence 0123699999988876544433211 1 235899999998776533 357999
Q ss_pred EECCCCCeeE
Q 004456 457 LSWPLKKSSQ 466 (752)
Q Consensus 457 ~d~~~g~~~~ 466 (752)
+|+.+++...
T Consensus 271 ~d~~~~~~~~ 280 (391)
T 1l0q_A 271 IDTATNTITA 280 (391)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEEE
Confidence 9998877554
No 122
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=1e-15 Score=158.58 Aligned_cols=277 Identities=9% Similarity=-0.044 Sum_probs=169.5
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc--eeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~--~~lt~~~~ 82 (752)
..|.++++.. |+.......+.. .. .++|||||++|+++.. ....|+++++++++. +.++...
T Consensus 20 ~~v~~~d~~~----~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~- 83 (331)
T 3u4y_A 20 RRISFFSTDT----LEILNQITLGYD-FV-DTAITSDCSNVVVTSD---------FCQTLVQIETQLEPPKVVAIQEGQ- 83 (331)
T ss_dssp TEEEEEETTT----CCEEEEEECCCC-EE-EEEECSSSCEEEEEES---------TTCEEEEEECSSSSCEEEEEEECS-
T ss_pred CeEEEEeCcc----cceeeeEEccCC-cc-eEEEcCCCCEEEEEeC---------CCCeEEEEECCCCceeEEecccCC-
Confidence 4677888776 776555433322 35 8999999998877642 346999999998885 3332222
Q ss_pred ccccccccc-eEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 83 ICLNAVFGS-FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 83 ~~~~~~~~~-~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.... +.|+|||+.|+ +.... + ....|++
T Consensus 84 -----~~~~~~~~s~dg~~l~-~~~~~-~--------------------------------------------~~~~i~v 112 (331)
T 3u4y_A 84 -----SSMADVDITPDDQFAV-TVTGL-N--------------------------------------------HPFNMQS 112 (331)
T ss_dssp -----SCCCCEEECTTSSEEE-ECCCS-S--------------------------------------------SSCEEEE
T ss_pred -----CCccceEECCCCCEEE-EecCC-C--------------------------------------------CcccEEE
Confidence 2345 89999999988 42210 0 0038999
Q ss_pred Ecc-CCCccc-cCCccceeccccCCCCceEEEEecccCccccccccCcccc-EEEEecCCcee-EEecCCCCCCCCCccc
Q 004456 162 GSL-DGTAKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK-VQVWTTDGKLV-RELCDLPPAEDIPVCY 237 (752)
Q Consensus 162 ~~~-~G~~~~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~-~~l~~~~~~~~~~~~~ 237 (752)
+++ +++..+ +........++|||||++|++..... .. +.+|+++.... ........
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~-------- 172 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFI-------- 172 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEE--------
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccc--------
Confidence 999 564433 33335668999999999988876543 25 78887764321 11100000
Q ss_pred CCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC---eEEeecccceeeeeeecCCceEE
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALV 314 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~~~~~~~~~~spDg~~l~ 314 (752)
.....+..+.|+|||++ |++... ..+.+.++|+ ++++. ............++|||||+.|+
T Consensus 173 -~~~~~~~~~~~spdg~~-l~v~~~-----------~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 173 -SGGTRPFNITFTPDGNF-AFVANL-----------IGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp -CSSSSEEEEEECTTSSE-EEEEET-----------TTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred -cCCCCccceEECCCCCE-EEEEeC-----------CCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEE
Confidence 00122568999999997 666642 2347888988 44444 33333445667899999999887
Q ss_pred EeeecccCceeEEEEcCCCCCccceeccccccccccC---CCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCC
Q 004456 315 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS---DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE 391 (752)
Q Consensus 315 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~ 391 (752)
+... ....|+++++.++ +...+.......... ......++|||||++|++...+
T Consensus 237 v~~~---~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------------ 293 (331)
T 3u4y_A 237 VLTE---STVDVFNFNQLSG--TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI------------------ 293 (331)
T ss_dssp EECS---SEEEEEEEETTTT--EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT------------------
T ss_pred EEEc---CCCEEEEEECCCC--ceeeecccccccccCCCCcccccceEECCCCCEEEEecCC------------------
Confidence 7642 2345999999874 322221111100000 0011235799999999887622
Q ss_pred CCCCeeEEEecCCCceeE
Q 004456 392 GNIPFLDLFDINTGSKER 409 (752)
Q Consensus 392 ~~~~~l~~~d~~~g~~~~ 409 (752)
...|.+||+.+.....
T Consensus 294 --~~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 294 --SRELKVFTISGKVVGY 309 (331)
T ss_dssp --TTEEEEEETTSCEEEE
T ss_pred --CCcEEEEEecCCcccc
Confidence 2358999997665443
No 123
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.74 E-value=3.9e-17 Score=180.92 Aligned_cols=238 Identities=20% Similarity=0.183 Sum_probs=161.7
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH-HHHHhCCcEEE
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVL 559 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~ 559 (752)
..+.+.|+..||..|.+.+|.|++ .++.|+||+.||.+.... ....+...+ ..|+++||+|+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~------------~~~~y~~~~~~~la~~Gy~vv 70 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDV------------FAWSTQSTNWLEFVRDGYAVV 70 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCH------------HHHHTTTCCTHHHHHTTCEEE
T ss_pred EEEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCcc------------ccccchhhHHHHHHHCCCEEE
Confidence 356789999999999999999986 235899999998542210 000000123 78899999999
Q ss_pred ecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC-CC
Q 004456 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YN 638 (752)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~-~~ 638 (752)
+.+ .+|+|.+......+....+|+.++++||.++...+ .+|+++|+||||++++.++.++|+.++++|+.++. .+
T Consensus 71 ~~D---~RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d 146 (587)
T 3i2k_A 71 IQD---TRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 146 (587)
T ss_dssp EEE---CTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred EEc---CCCCCCCCCccccccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccc
Confidence 944 45666554332223457899999999999887655 79999999999999999999988999999999998 66
Q ss_pred CCCCc---cCcccc-ccchhhh----------------------------------------------------------
Q 004456 639 KTLTP---FGFQTE-FRTLWEA---------------------------------------------------------- 656 (752)
Q Consensus 639 ~~~~~---~~~~~~-~~~~~~~---------------------------------------------------------- 656 (752)
..... .+.... ....|..
T Consensus 147 ~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (587)
T 3i2k_A 147 YRAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVV 226 (587)
T ss_dssp CCCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTT
T ss_pred cccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhh
Confidence 43211 111000 0000100
Q ss_pred -----HHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc---------
Q 004456 657 -----TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA--------- 722 (752)
Q Consensus 657 -----~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--------- 722 (752)
...|...++...+++|++|+|+++|..|..+ ..+.+++++++..++ ..+++-|.. |+...
T Consensus 227 ~~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~----~~~~~~~~~l~~~~~-~~L~iGPw~-H~~~~~~~g~~~~g 300 (587)
T 3i2k_A 227 DHPDNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKDNAD-ARLVVGPWS-HSNLTGRNADRKFG 300 (587)
T ss_dssp TCCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTTTSC-EEEEEEEEE-TTBCSSEETTEECC
T ss_pred cCCCCChHHhcCChhhhhccCCCCEEEEccCCCccc----hHHHHHHHHHhhcCC-CEEEECCcc-ccCccccCCCcccC
Confidence 0112333455567889999999999999874 456778899887665 367766653 65311
Q ss_pred ccc---HHHHHHHHHHHHHHHhcCCC
Q 004456 723 REN---VMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 723 ~~~---~~~~~~~~~~fl~~~l~~~~ 745 (752)
... ..+..+.+++||+++|++.+
T Consensus 301 ~~~~~~~~~~~~~~~~wFD~~Lkg~~ 326 (587)
T 3i2k_A 301 IAATYPIQEATTMHKAFFDRHLRGET 326 (587)
T ss_dssp GGGSCCHHHHHHHHHHHHHHHHSCCT
T ss_pred CccccccchhhHHHHHHHHHHhcCCC
Confidence 111 11334889999999998764
No 124
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=6.7e-16 Score=176.88 Aligned_cols=295 Identities=13% Similarity=0.049 Sum_probs=182.9
Q ss_pred eeEEeecCCCCCCCCceeecCCC---CC--ceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYP---DG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~---~~--~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
.||.++..+ |+.++|+... ++ ..+..++|||||++|||+... ..+...+||++++++|+..+....
T Consensus 95 ~l~~~~~~~----~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-----~G~~~~~i~v~dl~tg~~~~~~~~ 165 (695)
T 2bkl_A 95 ILYWRQGES----GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-----NAADEAVLHVIDVDSGEWSKVDVI 165 (695)
T ss_dssp EEEEEESTT----SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-----TTCSCCEEEEEETTTCCBCSSCCB
T ss_pred EEEEEcCCC----CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-----CCCceEEEEEEECCCCCCcCCccc
Confidence 367777766 7888887422 11 157889999999999998752 123447999999999987622111
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
... ....++|||||+.|+|++....+.. .. . +.....+||
T Consensus 166 ~~~----~~~~~~wspDg~~l~~~~~d~~~~~---------~~--~-------------------------~~~~~~~v~ 205 (695)
T 2bkl_A 166 EGG----KYATPKWTPDSKGFYYEWLPTDPSI---------KV--D-------------------------ERPGYTTIR 205 (695)
T ss_dssp SCC----TTCCCEECTTSSEEEEEECCCCTTS---------CG--G-------------------------GGGGGCEEE
T ss_pred Ccc----cccceEEecCCCEEEEEEecCCCCC---------cc--c-------------------------cCCCCCEEE
Confidence 211 1257899999999999865322110 00 0 000236899
Q ss_pred EEcc-CCCc--cccCCc----cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCC
Q 004456 161 LGSL-DGTA--KDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (752)
Q Consensus 161 ~~~~-~G~~--~~l~~~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (752)
++++ ++.. +.+... ..+..+.|||||++|++.+.... ...+|++++..+++.+.+......
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~~~--- 273 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW---------SENDVYWKRPGEKDFRLLVKGVGA--- 273 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---------TEEEEEEECTTCSSCEEEEECSSC---
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---------CceEEEEEcCCCCceEEeecCCCc---
Confidence 9999 4532 333322 35678999999999999876641 124789888876666666644322
Q ss_pred CcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC---eEEeec--ccceeeeeeec
Q 004456 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKL--DLRFRSVSWCD 308 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~--~~~~~~~~~sp 308 (752)
...+.| |||+ +++.+..+ ..+..|+++++ +++.. +.+... ...+..++|+
T Consensus 274 ----------~~~~~~-~~g~--l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 274 ----------KYEVHA-WKDR--FYVLTDEG--------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp ----------CEEEEE-ETTE--EEEEECTT--------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred ----------eEEEEe-cCCc--EEEEECCC--------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 234455 7888 55554321 13458999998 44442 556544 3346778888
Q ss_pred CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCC
Q 004456 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGF 388 (752)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~ 388 (752)
+ ..|++....+ ...+||++++++. ....+.-...... -.++++|||+.|++....
T Consensus 329 ~-~~lv~~~~~d-g~~~l~~~~~~g~--~~~~l~~~~~~~v------~~~~~s~d~~~l~~~~ss--------------- 383 (695)
T 2bkl_A 329 G-GHLSLEYLKD-ATSEVRVATLKGK--PVRTVQLPGVGAA------SNLMGLEDLDDAYYVFTS--------------- 383 (695)
T ss_dssp T-TEEEEEEEET-TEEEEEEEETTCC--EEEECCCSSSSEE------CCCBSCTTCSEEEEEEEE---------------
T ss_pred C-CEEEEEEEEC-CEEEEEEEeCCCC--eeEEecCCCCeEE------EEeecCCCCCEEEEEEcC---------------
Confidence 4 4566655333 5568999998652 2233321111111 115579999988887632
Q ss_pred CCCCCCCeeEEEecCCCceeEEeec
Q 004456 389 TPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 389 ~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
......||++|+.+|+.+.+...
T Consensus 384 --~~~P~~v~~~d~~~g~~~~l~~~ 406 (695)
T 2bkl_A 384 --FTTPRQIYKTSVSTGKSELWAKV 406 (695)
T ss_dssp --TTEEEEEEEEETTTCCEEEEEEC
T ss_pred --CCCCCEEEEEECCCCcEEEEecC
Confidence 12234699999999987766543
No 125
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.73 E-value=4.4e-16 Score=177.92 Aligned_cols=273 Identities=14% Similarity=0.116 Sum_probs=175.9
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+..++|||||++|||+... ..+....||++|+++|+..+.+.... ....++|| ||+.|+|++......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~-----~G~~~~~i~v~dl~tg~~~~~~~~~~-----k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSL-----AGSDWREIHLMDVESKQPLETPLKDV-----KFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEEC-----SSCCEEEEEEEETTTCSEEEEEEEEE-----ESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEec-----CCCceEEEEEEECCCCCCCccccCCc-----eeccEEEe-CCCEEEEEEecCccc
Confidence 57788999999999998752 12344799999999999766532110 13578999 999999986542110
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC--CccccCCc-c----ceeccccC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP-A----VYTAVEPS 183 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G--~~~~l~~~-~----~~~~~~~S 183 (752)
. . .. ......+||++++ ++ +.+.+... . ...++.||
T Consensus 199 ~-----------~-~~------------------------~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 199 S-----------E-LS------------------------ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp ------------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred c-----------c-cc------------------------ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 0 0 00 0002268999998 44 23444333 2 35688999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecCCc--eeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
|||++|++.+.... ...++++++++++ ..+.+...... . ...|+++|+. |++.+
T Consensus 243 pDg~~l~~~~~~~~---------~~~~i~~~d~~~~~~~~~~l~~~~~~-------------~-~~~~~~~g~~-l~~~t 298 (693)
T 3iuj_A 243 EDDRFLLISAANST---------SGNRLYVKDLSQENAPLLTVQGDLDA-------------D-VSLVDNKGST-LYLLT 298 (693)
T ss_dssp TTSCEEEEEEESSS---------SCCEEEEEETTSTTCCCEEEECSSSS-------------C-EEEEEEETTE-EEEEE
T ss_pred CCCCEEEEEEccCC---------CCcEEEEEECCCCCCceEEEeCCCCc-------------e-EEEEeccCCE-EEEEE
Confidence 99999999876532 1258999998766 45555543221 1 1238999998 88776
Q ss_pred eccCCCCccccCccceEEeccCCCCCCCCC---eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccc
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 338 (752)
..+. .+..|+.+++ ++... +.++....... .|+++++.|++....+ ...+|++++++++ ..
T Consensus 299 ~~~~--------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~-g~~~l~~~d~~g~--~~ 362 (693)
T 3iuj_A 299 NRDA--------PNRRLVTVDA---ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD-ATARVEQFDYEGK--RV 362 (693)
T ss_dssp CTTC--------TTCEEEEEET---TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET-TEEEEEEECTTSC--EE
T ss_pred CCCC--------CCCEEEEEeC---CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC-CeeEEEEEECCCC--ee
Confidence 4321 3458999998 44443 56665554443 8999999999987544 5568999999863 33
Q ss_pred eeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeecc
Q 004456 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (752)
Q Consensus 339 ~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (752)
..+.-...... ..+++++|++.|++.... ......|+.+|+++++.+.+...+
T Consensus 363 ~~l~~p~~~~~------~~~~~~~d~~~l~~~~ss-----------------~~tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 363 REVALPGLGSV------SGFNGKHDDPALYFGFEN-----------------YAQPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp EEECCSSSSEE------EECCCCTTCSCEEEEEEC-----------------SSSCCEEEEECTTTCCEEEEECCC
T ss_pred EEeecCCCceE------EeeecCCCCCEEEEEecC-----------------CCCCCEEEEEECCCCeEEEEEeCC
Confidence 33321111110 114478899998887632 133457999999999887776543
No 126
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.73 E-value=2.4e-16 Score=158.59 Aligned_cols=214 Identities=17% Similarity=0.114 Sum_probs=137.9
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++....+-|+. .|.||++||.+.. ...+...+..|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~---------------~~~w~~~~~~l~~~g~~vi~---~D~ 56 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLS---------------ADDWDNQMLFFLSHGYRVIA---HDR 56 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC---------------GGGGHHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCCc---------------hhhHHHHHHHHHHCCceEEE---EcC
Confidence 445678888777664432 3789999995311 11122456678899999999 566
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 641 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~-- 641 (752)
+|+|.+... ........+|+.++++.+. .+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 57 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 57 RGHGRSDQPSTGHDMDTYAADVAALTEALD------LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred CcCCCCCCCCCCCCHHHHHHHHHHHHHHcC------CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 778777543 2345666778877777662 35899999999999999977776 999999999886432100
Q ss_pred --CccCccc-----------------------------c--c--cc------hhhh-----H-------HHHHhcChhhh
Q 004456 642 --TPFGFQT-----------------------------E--F--RT------LWEA-----T-------NVYIEMSPITH 668 (752)
Q Consensus 642 --~~~~~~~-----------------------------~--~--~~------~~~~-----~-------~~~~~~~~~~~ 668 (752)
.+.+... . . .. .+.. . ..+...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 0000000 0 0 00 0000 0 00011122233
Q ss_pred cCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 669 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 669 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+.++++|+|+++|++|..+| +....+....+ -.+.++++++++||... .+.++.+.+.+.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAEL---LANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhh---CCCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999998 65433333322 23579999999999865 4668888999999985
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.73 E-value=1.6e-15 Score=163.54 Aligned_cols=316 Identities=11% Similarity=0.047 Sum_probs=191.9
Q ss_pred CCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc-cccccccceEEecC
Q 004456 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-CLNAVFGSFVWVNN 97 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~-~~~~~~~~~~wspd 97 (752)
++.+.+..++.+.....++||| ++.++++. .....|+++++++++..+....... .....+..+.|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~---------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFID-NTRLAIPL---------LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESS-SSEEEEEB---------TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred CcceEEEEEcCCCCceEEEEeC-CCeEEEEe---------CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 4444444333444566899999 55666653 2335799999998887664322110 00113567899999
Q ss_pred CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc-
Q 004456 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP- 174 (752)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~- 174 (752)
|+.++..+. .+.|+++++ +++. ..+..+
T Consensus 181 ~~~~~s~~~-------------------------------------------------d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 181 NELWVSQMQ-------------------------------------------------ANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp TEEEEEEGG-------------------------------------------------GTEEEEEETTTCCEEEEEECSS
T ss_pred CEEEEEECC-------------------------------------------------CCEEEEEECCCceEEEEEcCCC
Confidence 986665421 157999998 5543 334333
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 254 (752)
..+..++|+|||++|++..... ..|.+||+.+++......... .+..++|+|||+
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~g~ 266 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWIS------------EDISVIDRKTKLEIRKTDKIG-------------LPRGLLLSKDGK 266 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTT------------TEEEEEETTTTEEEEECCCCS-------------EEEEEEECTTSS
T ss_pred CCeeEEEEcCCCCEEEEEecCC------------CcEEEEECCCCcEEEEecCCC-------------CceEEEEcCCCC
Confidence 6788999999999998876443 379999998776544333221 256799999999
Q ss_pred ceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
. |+......+... ...+.|+++|+ .++..............++|+|||+.+++.... ...|+++++.++
T Consensus 267 ~-l~~~~~~~~~~~----~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~ 335 (433)
T 3bws_A 267 E-LYIAQFSASNQE----SGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEK 335 (433)
T ss_dssp E-EEEEEEESCTTC----SCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEEETTTT
T ss_pred E-EEEEECCCCccc----cCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEEECCCC
Confidence 7 666653221110 13458899998 444444444444567789999999988776422 346888998874
Q ss_pred CccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCc-ceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeec
Q 004456 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE-QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
+......... ....++|+|||++|++.....+.. ..+++ .| .....|++||+.+++.......
T Consensus 336 --~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~---~g----~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 336 --KVQKSIPVFD-------KPNTIALSPDGKYLYVSCRGPNHPTEGYLK---KG----LVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp --EEEEEEECSS-------SEEEEEECTTSSEEEEEECCCCCTTTCTTS---CC----SSCCEEEEEETTTTEEEEEEEC
T ss_pred --cEEEEecCCC-------CCCeEEEcCCCCEEEEEecCCCcccccccc---cc----ccceEEEEEECCCCcEEEEecC
Confidence 2222221111 111377999999988876331000 00000 00 0122699999999887665543
Q ss_pred cchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECC
Q 004456 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (752)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~ 460 (752)
... +. .++|+|||+.|++.... ...|++++++
T Consensus 400 ~~~-----~~-------~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 400 GNQ-----PT-------GLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp SSS-----EE-------EEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred CCC-----Cc-------eEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 211 22 35899999998776432 2357777754
No 128
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.73 E-value=1.3e-15 Score=159.52 Aligned_cols=288 Identities=11% Similarity=0.071 Sum_probs=166.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||-.+. +..+--...|++++...+....-...........+..++|+||++.|+.. .
T Consensus 44 ~V~~v~fSpDG~~las~s~----d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~----- 113 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASS----LSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-D----- 113 (357)
T ss_dssp EEEEEEECSSSCEEEEEEC----SSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-T-----
T ss_pred CEEEEEECCCCCEEEEEcC----CCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-C-----
Confidence 5888999999999998754 11111246799998877654322111111112246789999999866533 1
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcccc-----CCc-cceeccccCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-----GTP-AVYTAVEPSP 184 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l-----~~~-~~~~~~~~Sp 184 (752)
.+.|.+||+ +|+.... ..+ ..+..++|||
T Consensus 114 --------------------------------------------dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 114 --------------------------------------------SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp --------------------------------------------TSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred --------------------------------------------CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 146777887 5532211 123 6788999999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEecc
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~ 264 (752)
||++|+..+.+. .|.+||+.+++........ ...+..++|+|+++..++...
T Consensus 150 dg~~l~sgs~dg-------------~v~iwd~~~~~~~~~~~~h------------~~~v~~v~~s~~~~~~~~s~~--- 201 (357)
T 4g56_B 150 DGTQAVSGGKDF-------------SVKVWDLSQKAVLKSYNAH------------SSEVNCVAACPGKDTIFLSCG--- 201 (357)
T ss_dssp SSSEEEEEETTS-------------CEEEEETTTTEEEEEECCC------------SSCEEEEEECTTCSSCEEEEE---
T ss_pred CCCEEEEEeCCC-------------eEEEEECCCCcEEEEEcCC------------CCCEEEEEEccCCCceeeeec---
Confidence 999998876653 7999999887654433221 122667899999986233332
Q ss_pred CCCCccccCccceEEeccCCCCCCCCC-eEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceec
Q 004456 265 RGDANVEVSPRDIIYTQPAEPAEGEKP-EILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (752)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 341 (752)
..+.|.+||+. .+.. ..+. .....+..++|+|++..++.... ....|.++++.++ +....
T Consensus 202 ---------~dg~v~~wd~~---~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~---~d~~i~~wd~~~~--~~~~~ 264 (357)
T 4g56_B 202 ---------EDGRILLWDTR---KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD---ETGNVSLVNIKNP--DSAQT 264 (357)
T ss_dssp ---------TTSCEEECCTT---SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE---SSSCEEEEESSCG--GGCEE
T ss_pred ---------cCCceEEEECC---CCceeeeeeeccccccccchhhhhcccceEEEee---cccceeEEECCCC--cEeEE
Confidence 33478888883 3332 2222 23445778999999765544332 2235888888774 22222
Q ss_pred cccccccccCCCCCCceeeCCCCCe-EEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhh
Q 004456 342 FDRVFENVYSDPGSPMMTRTSTGTN-VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (752)
Q Consensus 342 ~~~~~~~~~~~~~~p~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (752)
....... .-.++|||+|.. |+..+.+ | .|.+||+.+++......-..
T Consensus 265 ~~~~~~~------v~~l~~sp~~~~~lasgs~D-------------~--------~i~iwd~~~~~~~~~~~H~~----- 312 (357)
T 4g56_B 265 SAVHSQN------ITGLAYSYHSSPFLASISED-------------C--------TVAVLDADFSEVFRDLSHRD----- 312 (357)
T ss_dssp ECCCSSC------EEEEEECSSSSCCEEEEETT-------------S--------CEEEECTTSCEEEEECCCSS-----
T ss_pred Eecccee------EEEEEEcCCCCCEEEEEeCC-------------C--------EEEEEECCCCcEeEECCCCC-----
Confidence 2211111 112679999865 4444421 1 48999999887655432111
Q ss_pred ceeeeecCCcceeccc-CCCEEEEEEecCCCCcEEEEEECCC
Q 004456 421 TAVALVFGQGEEDINL-NQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 421 ~~~~~~~~~~~~~~s~-d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
.+.. ++||| |++.|+ +... -..|++|++.+
T Consensus 313 ~V~~-------vafsP~d~~~l~-s~s~---Dg~v~iW~~~~ 343 (357)
T 4g56_B 313 FVTG-------VAWSPLDHSKFT-TVGW---DHKVLHHHLPS 343 (357)
T ss_dssp CEEE-------EEECSSSTTEEE-EEET---TSCEEEEECC-
T ss_pred CEEE-------EEEeCCCCCEEE-EEcC---CCeEEEEECCC
Confidence 1233 48998 666554 3332 23588888765
No 129
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.73 E-value=8.3e-17 Score=160.22 Aligned_cols=187 Identities=14% Similarity=0.141 Sum_probs=130.8
Q ss_pred EEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc
Q 004456 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND 576 (752)
Q Consensus 497 ~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~ 576 (752)
+.+|+|...... .++.|+||++||++.. ...+..++..|+++||.|++++.+ +.+ .
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~---------------~~~~~~~~~~l~~~G~~v~~~d~~---~s~---~-- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAG---------------PSTYAGLLSHWASHGFVVAAAETS---NAG---T-- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCC---------------GGGGHHHHHHHHHHTCEEEEECCS---CCT---T--
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCC---------------chhHHHHHHHHHhCCeEEEEecCC---CCc---c--
Confidence 788888752211 1258999999997421 111234677888999999996654 211 1
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcc
Q 004456 577 RFVEQLVSSAEAAVEEVVRR---------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 647 (752)
Q Consensus 577 ~~~~~~~~d~~~~~~~l~~~---------~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~ 647 (752)
..|+..+++++.+. ..++.++++|+||||||++++.++ .+.+++++|+++|..... .
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~----~-- 155 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL----G-- 155 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST----T--
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc----c--
Confidence 12334455555442 245678999999999999999888 456899999988753310 0
Q ss_pred ccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHH-HHHHHHHHHhCCCcEEEEEeCCCCccCCccccH
Q 004456 648 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENV 726 (752)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 726 (752)
.....+.++++|+|++||++|.++| ... ++++++. .+.+++++++++++|.+.. +..
T Consensus 156 ----------------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 156 ----------------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp ----------------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred ----------------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0012356678999999999999998 775 6766665 4467899999999998763 445
Q ss_pred HHHHHHHHHHHHHHhcC
Q 004456 727 MHVIWETDRWLQKYCLS 743 (752)
Q Consensus 727 ~~~~~~~~~fl~~~l~~ 743 (752)
..+.+.+.+||+++|.+
T Consensus 214 ~~~~~~i~~fl~~~l~~ 230 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMD 230 (258)
T ss_dssp GGGHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 67888999999988854
No 130
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.73 E-value=7.5e-17 Score=150.19 Aligned_cols=173 Identities=12% Similarity=0.087 Sum_probs=122.9
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~ 591 (752)
+.|+||++||.+.. ...+. ...++..|+++||.|+++ +.+|+|.+.... ......+++.++++
T Consensus 3 ~~~~vv~~HG~~~~-----------~~~~~--~~~~~~~l~~~g~~v~~~---d~~g~g~s~~~~-~~~~~~~~~~~~~~ 65 (176)
T 2qjw_A 3 SRGHCILAHGFESG-----------PDALK--VTALAEVAERLGWTHERP---DFTDLDARRDLG-QLGDVRGRLQRLLE 65 (176)
T ss_dssp SSCEEEEECCTTCC-----------TTSHH--HHHHHHHHHHTTCEEECC---CCHHHHTCGGGC-TTCCHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCC-----------ccHHH--HHHHHHHHHHCCCEEEEe---CCCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 36999999996411 01111 114566788999999994 455555542211 11223445556666
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCC
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 671 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (752)
++.+.. +.++++++||||||.+++.++.++| ++++|+++|...... +. ....
T Consensus 66 ~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~----~~--------------------~~~~ 117 (176)
T 2qjw_A 66 IARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP----LP--------------------ALDA 117 (176)
T ss_dssp HHHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT----BC--------------------CCCC
T ss_pred HHHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc----cC--------------------cccc
Confidence 666653 3478999999999999999999987 999999998654311 00 0456
Q ss_pred CCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 672 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 672 ~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+++|+|+++|++|..+| +.+++++++.+ +++++++ +++|.+ .+...++.+.+.+||++
T Consensus 118 ~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 118 AAVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CSSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 78999999999999999 99998888876 3578888 899987 35677788888888864
No 131
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.73 E-value=4e-17 Score=161.33 Aligned_cols=201 Identities=12% Similarity=0.131 Sum_probs=130.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~ 590 (752)
.|.||++||.+.. ...| ..++..|+++||.|++ .+.+|+|.+... ........+|+.+++
T Consensus 16 ~~~vvllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~---~D~~GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFTGN-----------SADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTTCC-----------THHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCC-----------hHHH----HHHHHHHHHCCCEEEe---cccCCCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 3779999995311 1111 2356677889999999 566777754211 112445567777888
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-c--Ccc--------ccccchhhhHH-
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F--GFQ--------TEFRTLWEATN- 658 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-~--~~~--------~~~~~~~~~~~- 658 (752)
+++.+.+. +++.|+||||||.+|+.++.++| ++++|++++........ . .+. ...........
T Consensus 78 ~~l~~~~~---~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKGY---EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHTC---CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcCC---CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 88877642 68999999999999999999998 78888655432210000 0 000 00000000000
Q ss_pred -------------HHHh--cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc
Q 004456 659 -------------VYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 723 (752)
Q Consensus 659 -------------~~~~--~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 723 (752)
.+.. .+....++++++|+|+++|++|..+| +..++.+.+.+.. ...+++++|++||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 0000 01223467789999999999999999 8888777766542 347999999999987654
Q ss_pred ccHHHHHHHHHHHHHHH
Q 004456 724 ENVMHVIWETDRWLQKY 740 (752)
Q Consensus 724 ~~~~~~~~~~~~fl~~~ 740 (752)
..++.+.+.+.+||++.
T Consensus 229 ~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLESL 245 (247)
T ss_dssp TTHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 45788899999999863
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=3e-16 Score=163.83 Aligned_cols=286 Identities=10% Similarity=-0.009 Sum_probs=162.4
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
.+|+++.++. .+|+.+.+...........++|||||+ |+++... .....|+++++++++.+++......
T Consensus 16 ~~i~v~~~d~--~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~-------~~~~~v~~~~~~~g~~~~~~~~~~~- 84 (347)
T 3hfq_A 16 QGIYQGTLDT--TAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE-------DDEGGIAAWQIDGQTAHKLNTVVAP- 84 (347)
T ss_dssp CEEEEEEEET--TTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE-------TTEEEEEEEEEETTEEEEEEEEEEE-
T ss_pred CCEEEEEEcC--CCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec-------CCCceEEEEEecCCcEEEeeeeecC-
Confidence 4577777654 447766655333344577799999999 6554321 2347899999988887766531110
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
...+..++|+|||+.|+++... ...|.++++
T Consensus 85 -~~~p~~~a~spdg~~l~~~~~~------------------------------------------------~~~v~v~~~ 115 (347)
T 3hfq_A 85 -GTPPAYVAVDEARQLVYSANYH------------------------------------------------KGTAEVMKI 115 (347)
T ss_dssp -SCCCSEEEEETTTTEEEEEETT------------------------------------------------TTEEEEEEE
T ss_pred -CCCCEEEEECCCCCEEEEEeCC------------------------------------------------CCEEEEEEe
Confidence 1124578999999999887421 023444444
Q ss_pred --CCCccccCCc-------------cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC-CceeEEecCCC
Q 004456 165 --DGTAKDFGTP-------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLP 228 (752)
Q Consensus 165 --~G~~~~l~~~-------------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~ 228 (752)
+|....+... ..+..++|||||+ |++..... ..+++|+++ ++....+....
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~------------~~v~~~~~~~~g~~~~~~~~~ 182 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGS------------DKVYVYNVSDAGQLSEQSVLT 182 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTT------------TEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCC------------CEEEEEEECCCCcEEEeeeEE
Confidence 3433222111 2355789999999 66654432 378899887 44443332111
Q ss_pred CCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee---cc------c
Q 004456 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LD------L 299 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~~------~ 299 (752)
... ..+++.++|+|||++ |+++.. ..+.+.+++++. .++....+.. .. .
T Consensus 183 ~~~---------g~~p~~~~~spdg~~-l~v~~~-----------~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 183 MEA---------GFGPRHLVFSPDGQY-AFLAGE-----------LSSQIASLKYDT-QTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp CCT---------TCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEEEET-TTTEEEEEEEEESSCTTCCSCC
T ss_pred cCC---------CCCCceEEECCCCCE-EEEEeC-----------CCCEEEEEEecC-CCCceEEeeeeeecCCCCCCCC
Confidence 110 113567899999997 666642 223555665521 1233322221 11 2
Q ss_pred ceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcce
Q 004456 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (752)
Q Consensus 300 ~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~ 379 (752)
....++|||||+.|+++.... ..|.+++++.. +....+....... ...-.++|||||++|++...+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~---~~v~v~~~~~~-g~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~------ 306 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGY---NTLAVFAVTAD-GHLTLIQQISTEG----DFPRDFDLDPTEAFVVVVNQN------ 306 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETT---TEEEEEEECGG-GCEEEEEEEECSS----SCCCEEEECTTSSEEEEEETT------
T ss_pred cceeEEECCCCCEEEEEeCCC---CEEEEEEECCC-CcEEEeEEEecCC----CCcCeEEECCCCCEEEEEEcC------
Confidence 356789999999887765322 24666665432 2222222211111 011237799999999888632
Q ss_pred EEEEccCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 380 YILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
.....||.+|.++|+.+.+.
T Consensus 307 ------------~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 307 ------------TDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ------------TTEEEEEEECTTTCCEEEEE
T ss_pred ------------CCcEEEEEEeCCCCeEEecc
Confidence 12223555588888887664
No 133
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.73 E-value=1.7e-16 Score=159.75 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=138.1
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++.+..+-|+. .|.||++||.+.. ...+...+..|+++||.|++ .+.
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~---------------~~~w~~~~~~L~~~g~~vi~---~D~ 57 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPLS---------------ADDWDAQLLFFLAHGYRVVA---HDR 57 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC---------------GGGGHHHHHHHHHTTCEEEE---ECC
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCcc---------------hhHHHHHHHHHHhCCCEEEE---ecC
Confidence 445678888777664432 3789999996321 11122456678899999999 666
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 641 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~-- 641 (752)
+|+|.+... ........+|+.++++.+. .+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~d~~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 58 RGHGRSSQVWDGHDMDHYADDVAAVVAHLG------IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHHT------CTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 788877543 2345667778888877762 35799999999999999988776 899999999886421100
Q ss_pred --CccCccc---------------------------c-c-----cc------hhhh-----HH-------HHHhcChhhh
Q 004456 642 --TPFGFQT---------------------------E-F-----RT------LWEA-----TN-------VYIEMSPITH 668 (752)
Q Consensus 642 --~~~~~~~---------------------------~-~-----~~------~~~~-----~~-------~~~~~~~~~~ 668 (752)
.+..... . . .. .+.. .. .+...+....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 0000000 0 0 00 0000 00 0001122234
Q ss_pred cCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 669 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 669 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+.++++|+|+++|++|..+| +....+....+ -...++++++++||... .+.++.+.+.+.+||.
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKL---LPNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhh---CCCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56788999999999999998 65333333322 23579999999999865 4568888899999985
No 134
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.73 E-value=1.9e-16 Score=159.34 Aligned_cols=238 Identities=12% Similarity=0.092 Sum_probs=151.3
Q ss_pred CCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc
Q 004456 478 ASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (752)
.....+.+++.+. .+..+.++ |+|++ .|+||++||++.. ++...|... ......+++.||
T Consensus 7 ~~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~---------~~~~~w~~~-~~~~~~~~~~~~ 67 (280)
T 1r88_A 7 KAAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAG---------PDVSNWVTA-GNAMNTLAGKGI 67 (280)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCC---------SSSCHHHHT-SCHHHHHTTSSS
T ss_pred cCCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCC---------CChhhhhhc-ccHHHHHhcCCe
Confidence 3456788888875 67788888 78865 2899999996310 000111110 013455677899
Q ss_pred EEEecCCCCCCCCCCC-CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcc
Q 004456 557 AVLAGPSIPIIGEGDK-LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 634 (752)
Q Consensus 557 ~v~~~~~~~~~g~g~~-~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~ 634 (752)
.|++++.....++... ... ..+.....+| ++.++.++..+++++++|+|+||||++|+.++.++|++|+++|+++
T Consensus 68 ~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~s 144 (280)
T 1r88_A 68 SVVAPAGGAYSMYTNWEQDGSKQWDTFLSAE---LPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMS 144 (280)
T ss_dssp EEEEECCCTTSTTSBCSSCTTCBHHHHHHTH---HHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEES
T ss_pred EEEEECCCCCCccCCCCCCCCCcHHHHHHHH---HHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEEC
Confidence 9999665322222111 011 1222333333 4445555344677899999999999999999999999999999999
Q ss_pred CCCCCCCCccC------ccc----cccchhhh--HHHHHhcChhhhcCCC---CCCEEEEE----eCCCCC-------CC
Q 004456 635 GSYNKTLTPFG------FQT----EFRTLWEA--TNVYIEMSPITHANKI---KKPILIIH----GEVDDK-------VG 688 (752)
Q Consensus 635 ~~~~~~~~~~~------~~~----~~~~~~~~--~~~~~~~~~~~~~~~~---~~P~li~~----G~~D~~-------v~ 688 (752)
|..+....... ... .....|.. ...+...+|...+.++ .+|+++.| |+.|.. ++
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~ 224 (280)
T 1r88_A 145 GFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA 224 (280)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH
T ss_pred CccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH
Confidence 98664221000 000 00000000 0123344565544443 58999999 999983 56
Q ss_pred CCHHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 689 LFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 689 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
..++++++++|++.| .++++.++++++|.+. .+...+...+.||.+.|.
T Consensus 225 --~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 --MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp --HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHHHHh
Confidence 899999999999999 9999999988899743 355666777788877653
No 135
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.72 E-value=4.8e-16 Score=157.44 Aligned_cols=206 Identities=14% Similarity=0.109 Sum_probs=135.1
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCC---CCchhHHHHHhC-
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG---MTPTSSLIFLAR- 554 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~- 554 (752)
....+.+++.+.++ .+.+++|+|+++++. +++|+||++||++... ..+.. .....+..|+++
T Consensus 38 ~g~~~~~~~~s~~~-~~~~~vy~P~~~~~~--~~~Pvlv~lHG~~~~~-----------~~~~~~~~~~~~~~~~l~~~g 103 (297)
T 1gkl_A 38 AGRIVKETYTGING-TKSLNVYLPYGYDPN--KKYNIFYLMHGGGENE-----------NTIFSNDVKLQNILDHAIMNG 103 (297)
T ss_dssp CCEEEEEEEEETTE-EEEEEEEECTTCCTT--SCCEEEEEECCTTCCT-----------TSTTSTTTCHHHHHHHHHHTT
T ss_pred CceEEEEEEEcCCC-EEEEEEEeCCCCCCC--CCCCEEEEECCCCCCc-----------chhhcccchHHHHHHHHHHcC
Confidence 35678899988775 899999999987653 3599999999975321 11111 112345566766
Q ss_pred ---CcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCC------------CCCCcEEEEEeChHHHHHHHH
Q 004456 555 ---RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV------------ADPSRIAVGGHSYGAFMTAHL 619 (752)
Q Consensus 555 ---G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~------------~d~~~i~l~G~S~GG~~a~~~ 619 (752)
+|+|+.++.++. ......+....+++ ++.++.+... .|.++++|+|+||||++|+.+
T Consensus 104 ~~~~~ivv~pd~~~~-----~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~ 175 (297)
T 1gkl_A 104 ELEPLIVVTPTFNGG-----NCTAQNFYQEFRQN---VIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYV 175 (297)
T ss_dssp SSCCEEEEECCSCST-----TCCTTTHHHHHHHT---HHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHH
T ss_pred CCCCEEEEEecCcCC-----ccchHHHHHHHHHH---HHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHH
Confidence 499999654321 11222333334444 4455554422 356789999999999999999
Q ss_pred HHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHH
Q 004456 620 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 699 (752)
Q Consensus 620 ~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 699 (752)
+.++|++|+++++++|....... .......+........+.....++++.+|+.|.. ..+++++.+
T Consensus 176 a~~~p~~f~~~v~~sg~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~ 241 (297)
T 1gkl_A 176 MVNCLDYVAYFMPLSGDYWYGNS----------PQDKANSIAEAINRSGLSKREYFVFAATGSEDIA----YANMNPQIE 241 (297)
T ss_dssp HHHHTTTCCEEEEESCCCCBSSS----------HHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTT----HHHHHHHHH
T ss_pred HHhCchhhheeeEeccccccCCc----------cchhhhHHHHHHhhccCCcCcEEEEEEeCCCccc----chhHHHHHH
Confidence 99999999999999996532110 0010011111000111222345677789999975 567889999
Q ss_pred HHHhCC----------CcEEEEEeCCCCccC
Q 004456 700 ALKGHG----------ALSRLVLLPFEHHVY 720 (752)
Q Consensus 700 ~l~~~~----------~~~~~~~~~~~~H~~ 720 (752)
+|++.+ .++++.++|+++|.+
T Consensus 242 ~L~~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 242 AMKALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HHHTSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHHHcCCccccccccCCceEEEECCCCCcCH
Confidence 999988 589999999999974
No 136
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.72 E-value=3.1e-16 Score=157.45 Aligned_cols=215 Identities=11% Similarity=0.162 Sum_probs=137.9
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|. ...+|.|.. ++.|+||++|||||..++. ..+ .......+++.||.|++++++..
T Consensus 12 ~~~~--~~~~y~p~~------~~~p~iv~~HGGg~~~g~~--------~~~---~~~~~~~l~~~g~~Vi~vdYrla--- 69 (274)
T 2qru_A 12 ANGA--TVTIYPTTT------EPTNYVVYLHGGGMIYGTK--------SDL---PEELKELFTSNGYTVLALDYLLA--- 69 (274)
T ss_dssp TTSC--EEEEECCSS------SSCEEEEEECCSTTTSCCG--------GGC---CHHHHHHHHTTTEEEEEECCCCT---
T ss_pred cCCe--eEEEEcCCC------CCCcEEEEEeCccccCCCh--------hhc---hHHHHHHHHHCCCEEEEeCCCCC---
Confidence 3554 456677753 2379999999998654321 111 12344567788999999777532
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEccCCCCCCCCcc--
Q 004456 570 GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLTPF-- 644 (752)
Q Consensus 570 g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~---~~p~~~~~~v~~~~~~~~~~~~~-- 644 (752)
+ ...+...++|+.++++|+.++.. +.++|+|+|+|+||++|+.++. ..+..++++|+++|..+......
T Consensus 70 P-----e~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~ 143 (274)
T 2qru_A 70 P-----NTKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPR 143 (274)
T ss_dssp T-----TSCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCC
T ss_pred C-----CCCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCch
Confidence 1 22456779999999999998753 2679999999999999999987 34667889998887765211100
Q ss_pred --Ccc---c---------c--ccchhh-hH------------HHHHhc-C-------hh--hhcCCCCCCEEEEEeCCCC
Q 004456 645 --GFQ---T---------E--FRTLWE-AT------------NVYIEM-S-------PI--THANKIKKPILIIHGEVDD 685 (752)
Q Consensus 645 --~~~---~---------~--~~~~~~-~~------------~~~~~~-~-------~~--~~~~~~~~P~li~~G~~D~ 685 (752)
..+ . . ....+. .. ..+... . ++ ..+..+ +|+||++|+.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~ 222 (274)
T 2qru_A 144 KLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDE 222 (274)
T ss_dssp CSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCS
T ss_pred hhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCC
Confidence 000 0 0 000000 00 011000 0 01 123455 899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc---ccHHHHHHHHHHHHHH
Q 004456 686 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR---ENVMHVIWETDRWLQK 739 (752)
Q Consensus 686 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~ 739 (752)
.++ ..+++++.+++ ++++++++++++|++... +...++.+.+.+||.+
T Consensus 223 ~~~--~~~~~~l~~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 223 EVP--FRYSKKIGRTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp SSC--THHHHHHHHHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CcC--HHHHHHHHHhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 988 77777666654 456999999999997532 1223567888899875
No 137
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.72 E-value=1.7e-16 Score=157.61 Aligned_cols=211 Identities=19% Similarity=0.112 Sum_probs=132.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|..+....+-+ + .|.||++||.+.. . ...+...+..|+++||.|++ .+.+|+|
T Consensus 10 ~g~~l~~~~~g~-~--------~~~vvllHG~~~~-------------~-~~~~~~~~~~l~~~g~~vi~---~D~~G~G 63 (254)
T 2ocg_A 10 NGVQLHYQQTGE-G--------DHAVLLLPGMLGS-------------G-ETDFGPQLKNLNKKLFTVVA---WDPRGYG 63 (254)
T ss_dssp TTEEEEEEEEEC-C--------SEEEEEECCTTCC-------------H-HHHCHHHHHHSCTTTEEEEE---ECCTTST
T ss_pred CCEEEEEEEecC-C--------CCeEEEECCCCCC-------------C-ccchHHHHHHHhhCCCeEEE---ECCCCCC
Confidence 676776655421 1 3689999995311 0 01112355677788999999 5566777
Q ss_pred CCCCCch--hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-------
Q 004456 571 DKLPNDR--FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------- 641 (752)
Q Consensus 571 ~~~~~~~--~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~------- 641 (752)
.+..... .......++.++++++.+.+ .+++.|+||||||.+|+.+|.++|++++++|++++......
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 140 (254)
T 2ocg_A 64 HSRPPDRDFPADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE 140 (254)
T ss_dssp TCCSSCCCCCTTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHH
Confidence 7643321 11112334445555555543 36899999999999999999999999999999887432110
Q ss_pred --Ccc-Cccccccc-------------hhhhH-HHHHhc-------ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 642 --TPF-GFQTEFRT-------------LWEAT-NVYIEM-------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 642 --~~~-~~~~~~~~-------------~~~~~-~~~~~~-------~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
... .+...... .+... ..+... .....+.++++|+|+++|++|.++| ...++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~ 218 (254)
T 2ocg_A 141 GIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFHADFI 218 (254)
T ss_dssp TTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHHHHHH
Confidence 000 00000000 00000 000100 1123456789999999999999998 8887777
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHH
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 737 (752)
.+.+. ..++++++++||... .+.++.+.+.+.+||
T Consensus 219 ~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 219 HKHVK----GSRLHLMPEGKHNLH-LRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHST----TCEEEEETTCCTTHH-HHTHHHHHHHHHHHH
T ss_pred HHhCC----CCEEEEcCCCCCchh-hhCHHHHHHHHHHHh
Confidence 66653 348999999999865 456778888899987
No 138
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.72 E-value=1.5e-16 Score=159.33 Aligned_cols=198 Identities=18% Similarity=0.192 Sum_probs=130.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...| ......| +.+|.|++ .+.+|+|.+... ........+|+.+.
T Consensus 15 ~~~vvllHG~~~~-----------~~~w----~~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGGS-----------GSYW----LPQLAVL-EQEYQVVC---YDQRGTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTCC-----------GGGG----HHHHHHH-HTTSEEEE---CCCTTBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcc-----------HHHH----HHHHHHH-hhcCeEEE---ECCCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 6899999996421 0111 1234444 56799999 667788877443 12345556666665
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-cc---------------cc----
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-FQ---------------TE---- 649 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~-~~---------------~~---- 649 (752)
++.+ + .+++.|+||||||.+++.++.++|++++++|++++.......... +. ..
T Consensus 76 l~~l---~---~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA---G---IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT---T---CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc---C---CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 5543 2 368999999999999999999999999999998875321100000 00 00
Q ss_pred -ccchhh--------------------------hHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHH
Q 004456 650 -FRTLWE--------------------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 702 (752)
Q Consensus 650 -~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 702 (752)
....|. ....+...+....+.++++|+|+++|++|..+| ...++.+.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 000000 000011112223456789999999999999998 888777766553
Q ss_pred hCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 703 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 703 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
..++++++++||... .+.++.+.+.+.+||.+.+.
T Consensus 228 ----~~~~~~~~~~GH~~~-~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 228 ----DSQKMVMPYGGHACN-VTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp ----SEEEEEESSCCTTHH-HHCHHHHHHHHHHHHHHHHH
T ss_pred ----cCeEEEeCCCCcchh-hcCHHHHHHHHHHHHHHhcc
Confidence 468999999999765 67788999999999988764
No 139
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=4.1e-15 Score=156.21 Aligned_cols=308 Identities=9% Similarity=0.007 Sum_probs=188.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||... ....|.++++.+++.......... .+..+.|+||++.|+..+.+
T Consensus 34 ~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~d---- 95 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCS----------KDSSASVWYSLNGERLGTLDGHTG----TIWSIDVDCFTKYCVTGSAD---- 95 (369)
T ss_dssp CEEEEEECTTSCEEEEEE----------SSSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred eEEEEEEcCCCCEEEEEe----------CCCEEEEEeCCCchhhhhhhhcCC----cEEEEEEcCCCCEEEEEeCC----
Confidence 589999999999998863 346889999888775443322211 46788999999988876321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCCccceeccccCCCCceE
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYV 189 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~~~~~~~~~~SpDGk~l 189 (752)
+.|.++++ +++.. .+.....+..+.|+|||+.|
T Consensus 96 ---------------------------------------------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 96 ---------------------------------------------YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp ---------------------------------------------TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEE
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEE
Confidence 57999998 66443 33333788899999999999
Q ss_pred EEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCc--cccccceeeeeCCCceEEEEEeccCC
Q 004456 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSV--REGMRSISWRADKPSTLYWVEAQDRG 266 (752)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~--~~~~~~~~wspDG~~~l~~~~~~~~~ 266 (752)
+...... ....+.+.+|++...... .+...... ....+... ...+..+.|+|||+. |+...
T Consensus 131 ~~~~~~~--------~~~~g~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~----- 194 (369)
T 3zwl_B 131 LAILDNV--------MKNPGSINIYEIERDSATHELTKVSEE--PIHKIITHEGLDAATVAGWSTKGKY-IIAGH----- 194 (369)
T ss_dssp EEEECCB--------TTBCCEEEEEEEEECTTTCCEEEECSS--CSEEEECCTTCCCEEEEEECGGGCE-EEEEE-----
T ss_pred EEecCCc--------cCCCCEEEEEEecCCccceeecccccc--eeeeccCCcCccceeEEEEcCCCCE-EEEEc-----
Confidence 9876541 011247888887644211 00000000 00000011 113668999999996 55543
Q ss_pred CCccccCccceEEeccCCCCC-CCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccc
Q 004456 267 DANVEVSPRDIIYTQPAEPAE-GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 345 (752)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 345 (752)
..+.|.++|+. . ......+......+..++|+||++.|+... ....|.++++.++ .........
T Consensus 195 -------~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~v~d~~~~--~~~~~~~~~ 259 (369)
T 3zwl_B 195 -------KDGKISKYDVS--NNYEYVDSIDLHEKSISDMQFSPDLTYFITSS----RDTNSFLVDVSTL--QVLKKYETD 259 (369)
T ss_dssp -------TTSEEEEEETT--TTTEEEEEEECCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTC--CEEEEEECS
T ss_pred -------CCCEEEEEECC--CCcEeEEEEecCCCceeEEEECCCCCEEEEec----CCceEEEEECCCC--ceeeeecCC
Confidence 34478899883 1 122333445567789999999999998876 3346889998874 222222211
Q ss_pred cccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeee
Q 004456 346 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 425 (752)
Q Consensus 346 ~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 425 (752)
. ....++|+|+|+++++....+ ...++... .......+.+||..+++.......... .+.
T Consensus 260 ~-------~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~---~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~-- 319 (369)
T 3zwl_B 260 C-------PLNTAVITPLKEFIILGGGQE----AKDVTTTS---ANEGKFEARFYHKIFEEEIGRVQGHFG----PLN-- 319 (369)
T ss_dssp S-------CEEEEEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCSS----CEE--
T ss_pred C-------CceeEEecCCCceEEEeecCC----CceEEEEe---cCCCcceeEEEecCCCcchhheecccC----cEE--
Confidence 1 112367999999998887432 11111100 012233689999988876555433221 122
Q ss_pred ecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 004456 426 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (752)
Q Consensus 426 ~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g 462 (752)
.++|+||++.|+.... ...|++|++..+
T Consensus 320 -----~~~~s~~~~~l~s~~~----dg~v~iw~~~~~ 347 (369)
T 3zwl_B 320 -----TVAISPQGTSYASGGE----DGFIRLHHFEKS 347 (369)
T ss_dssp -----EEEECTTSSEEEEEET----TSEEEEEEECHH
T ss_pred -----EEEECCCCCEEEEEcC----CCeEEEEECccc
Confidence 2589999998766532 345888887654
No 140
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.72 E-value=2.4e-15 Score=169.56 Aligned_cols=234 Identities=11% Similarity=0.032 Sum_probs=144.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-eeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
......|||||++||+.+ ...++++++++++. +.++.+.. .+..++|||||++|+..+.+
T Consensus 20 ~~~~~~~spdg~~l~~~~-----------~~~v~l~~~~~~~~~~~~~~h~~-----~v~~~~~spdg~~lasg~~d--- 80 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-----------GTSVYTVPVGSLTDTEIYTEHSH-----QTTVAKTSPSGYYCASGDVH--- 80 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-----------TTEEEEEETTCSSCCEEECCCSS-----CEEEEEECTTSSEEEEEETT---
T ss_pred ceeEEeeCCCCCEEEeCC-----------CCEEEEecCCCcccCeEecCCCC-----ceEEEEECCCCcEEEEEeCC---
Confidence 355678999999999953 25888999876554 44443332 46788999999999876431
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc---cccCCc-cceeccccCCC
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPSPD 185 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~---~~l~~~-~~~~~~~~SpD 185 (752)
+.|.+||+ +++. ..+..+ +.+..++||||
T Consensus 81 ----------------------------------------------~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 81 ----------------------------------------------GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 114 (611)
T ss_dssp ----------------------------------------------SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCEEEeECCCCcceeeEeecccCCceEEEEECCC
Confidence 57888888 4432 223333 78889999999
Q ss_pred CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 186 Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
|++|+........ ...+++||... ....+. .....+..++|+||++..|+..+
T Consensus 115 g~~l~~~~~~~~~---------~~~v~~wd~~~-~~~~l~-------------gh~~~v~~v~f~p~~~~~l~s~s---- 167 (611)
T 1nr0_A 115 SKRIAAVGEGRER---------FGHVFLFDTGT-SNGNLT-------------GQARAMNSVDFKPSRPFRIISGS---- 167 (611)
T ss_dssp SCEEEEEECCSSC---------SEEEEETTTCC-BCBCCC-------------CCSSCEEEEEECSSSSCEEEEEE----
T ss_pred CCEEEEEECCCCc---------eeEEEEeeCCC-Ccceec-------------CCCCCceEEEECCCCCeEEEEEe----
Confidence 9999987654310 13677887432 222221 22234778999999986233332
Q ss_pred CCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccc
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 345 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 345 (752)
..+.+.+|+.. .+.....+......+..++|||||+.|+.++ ....|.++++.++. ....+....
T Consensus 168 --------~D~~v~lwd~~--~~~~~~~l~~H~~~V~~v~fspdg~~las~s----~D~~i~lwd~~~g~-~~~~~~~~~ 232 (611)
T 1nr0_A 168 --------DDNTVAIFEGP--PFKFKSTFGEHTKFVHSVRYNPDGSLFASTG----GDGTIVLYNGVDGT-KTGVFEDDS 232 (611)
T ss_dssp --------TTSCEEEEETT--TBEEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC-EEEECBCTT
T ss_pred --------CCCeEEEEECC--CCeEeeeeccccCceEEEEECCCCCEEEEEE----CCCcEEEEECCCCc-Eeeeecccc
Confidence 33467788762 1122233445566789999999999888876 23357788876641 111221100
Q ss_pred cccccCCCCCCceeeCCCCCeEEEeee
Q 004456 346 FENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 346 ~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
..........-.++|+|||++|+..+.
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred ccccccCCCEEEEEECCCCCEEEEEeC
Confidence 000000001123679999999987763
No 141
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.72 E-value=1.8e-16 Score=155.01 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHh
Q 004456 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 662 (752)
Q Consensus 583 ~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (752)
...+...++...+. .+|++||++.|+|+||++++.++.++|+.++++|.++|..... ..+.
T Consensus 114 ~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~-----------------~~~~- 174 (246)
T 4f21_A 114 IAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAW-----------------DNFK- 174 (246)
T ss_dssp HHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTH-----------------HHHS-
T ss_pred HHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcc-----------------cccc-
Confidence 34444445444443 5899999999999999999999999999999999999853210 0000
Q ss_pred cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 663 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 663 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
.... ....++|+|++||+.|++|| +..++++++.|++.|.++++..||+.||.+. .+.+..+.+||++.|+
T Consensus 175 -~~~~-~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 175 -GKIT-SINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp -TTCC-GGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred -cccc-ccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 0000 11135899999999999999 9999999999999999999999999999875 2456789999999884
No 142
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.71 E-value=2.1e-16 Score=157.96 Aligned_cols=211 Identities=18% Similarity=0.174 Sum_probs=138.8
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++.+...-+.+ .|+||++||.+... ..| ......|+ .+|.|++ .|.
T Consensus 9 ~~~~~g~~l~y~~~G~~~--------~p~lvl~hG~~~~~-----------~~w----~~~~~~L~-~~~~vi~---~D~ 61 (266)
T 3om8_A 9 LATSDGASLAYRLDGAAE--------KPLLALSNSIGTTL-----------HMW----DAQLPALT-RHFRVLR---YDA 61 (266)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGG----GGGHHHHH-TTCEEEE---ECC
T ss_pred EeccCCcEEEEEecCCCC--------CCEEEEeCCCccCH-----------HHH----HHHHHHhh-cCcEEEE---EcC
Confidence 455688888877764422 58999999964210 112 23444555 5899999 667
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP- 643 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~- 643 (752)
+|+|.+... ........+|+.+.++.+ ..+++.|+||||||.+|+.++.++|++++++|++++........
T Consensus 62 rG~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~ 135 (266)
T 3om8_A 62 RGHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ 135 (266)
T ss_dssp TTSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH
Confidence 788877543 234556667777766655 23589999999999999999999999999999987643211000
Q ss_pred -----------cCccccc---cchh----------hhHHH-------------------HHhcChhhhcCCCCCCEEEEE
Q 004456 644 -----------FGFQTEF---RTLW----------EATNV-------------------YIEMSPITHANKIKKPILIIH 680 (752)
Q Consensus 644 -----------~~~~~~~---~~~~----------~~~~~-------------------~~~~~~~~~~~~~~~P~li~~ 680 (752)
....... ...| ...+. +...+....+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~ 215 (266)
T 3om8_A 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIA 215 (266)
T ss_dssp HHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEE
T ss_pred HHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEE
Confidence 0000000 0000 00000 011112234667899999999
Q ss_pred eCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 681 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 681 G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
|++|.++| +..++.+.+.+.. .++++++ +||... .+.++.+.+.+.+||.
T Consensus 216 G~~D~~~~--~~~~~~l~~~ip~----a~~~~i~-~gH~~~-~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 216 GAYDTVTA--ASHGELIAASIAG----ARLVTLP-AVHLSN-VEFPQAFEGAVLSFLG 265 (266)
T ss_dssp ETTCSSSC--HHHHHHHHHHSTT----CEEEEES-CCSCHH-HHCHHHHHHHHHHHHT
T ss_pred eCCCCCCC--HHHHHHHHHhCCC----CEEEEeC-CCCCcc-ccCHHHHHHHHHHHhc
Confidence 99999998 8888888776644 4788887 789755 6778888899999984
No 143
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.71 E-value=7.2e-16 Score=166.36 Aligned_cols=220 Identities=14% Similarity=0.029 Sum_probs=145.4
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
...+.+.+.+|..+..... + ..|+||++||.+... ..| ..++..|+++||.|++
T Consensus 3 ~i~~~~~~~dG~~l~y~~~---G-------~gp~VV~lHG~~~~~-----------~~~----~~l~~~La~~Gy~Vi~- 56 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDH---G-------TGVPVVLIHGFPLSG-----------HSW----ERQSAALLDAGYRVIT- 56 (456)
T ss_dssp EEEEEEETTEEEEEEEEEE---S-------SSEEEEEECCTTCCG-----------GGG----TTHHHHHHHHTEEEEE-
T ss_pred eEeecccccCCeEEEEEEe---C-------CCCEEEEECCCCCcH-----------HHH----HHHHHHHHHCCcEEEE-
Confidence 4455666677777764433 1 258999999974221 112 2456788899999999
Q ss_pred CCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCC
Q 004456 562 PSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYN 638 (752)
Q Consensus 562 ~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~ 638 (752)
.+.+|+|.+... ........+|+.++++++ +.++++|+||||||++++.+++.+ |++++++|++++...
T Consensus 57 --~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 57 --YDRRGFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp --ECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred --ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 555677766443 234567788888888877 336899999999999999888876 899999999998654
Q ss_pred CCCCccCccccc--c------------ch--------------------hhhHHHHH---------------------hc
Q 004456 639 KTLTPFGFQTEF--R------------TL--------------------WEATNVYI---------------------EM 663 (752)
Q Consensus 639 ~~~~~~~~~~~~--~------------~~--------------------~~~~~~~~---------------------~~ 663 (752)
............ . .. ......+. ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (456)
T 3vdx_A 129 FLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYT 208 (456)
T ss_dssp CCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTC
T ss_pred ccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhh
Confidence 221110000000 0 00 00000000 00
Q ss_pred ChhhhcCCCCCCEEEEEeCCCCCCCCCHH-HHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 664 SPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 664 ~~~~~~~~~~~P~li~~G~~D~~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+....+.++++|+|+++|++|..+| +. ..+.+.+.+ ..+++++++++||.+. .+.+..+.+.+.+||++++.
T Consensus 209 d~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~----~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 209 DFRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL----PSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CCTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC----TTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC----CCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHhhc
Confidence 1223456788999999999999998 76 333333332 3468999999999866 46788999999999998874
No 144
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.71 E-value=5.4e-15 Score=152.16 Aligned_cols=274 Identities=15% Similarity=0.101 Sum_probs=172.5
Q ss_pred eeceeEecCC----CCeEEEeeccccccccccCcceEEEEEcccCccee---ccCCCCccccccccceEEecCCcEEEEE
Q 004456 32 KINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVNNSTLLIFT 104 (752)
Q Consensus 32 ~~~~~~~SPD----G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~---lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (752)
.+...+|+|+ ++.|+-.+ ....|.+++..+++... +..+.. .+..+.|+|++..++..
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs----------~D~~v~vW~~~~~~~~~~~~l~gh~~-----~v~~~~~~~~~~~l~s~ 98 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGS----------LDDLVKVWKWRDERLDLQWSLEGHQL-----GVVSVDISHTLPIAASS 98 (321)
T ss_dssp CEEEEEEC-------CEEEEEE----------TTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECSSSSEEEEE
T ss_pred cEEEEEEecCCCCCCCEEEEEc----------CCCCEEEEECCCCCeeeeeeeccCCC-----CEEEEEECCCCCEEEEE
Confidence 5899999986 45676653 23456666665554322 221211 46788999999988765
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceeccc
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVE 181 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~ 181 (752)
+. .+.|.++|+ +| ....+... ..+..++
T Consensus 99 s~-------------------------------------------------D~~i~lWd~~~~~~~~~~~~~~~~~~~~~ 129 (321)
T 3ow8_A 99 SL-------------------------------------------------DAHIRLWDLENGKQIKSIDAGPVDAWTLA 129 (321)
T ss_dssp ET-------------------------------------------------TSEEEEEETTTTEEEEEEECCTTCCCCEE
T ss_pred eC-------------------------------------------------CCcEEEEECCCCCEEEEEeCCCccEEEEE
Confidence 32 168899999 66 34444444 6677899
Q ss_pred cCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEE
Q 004456 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~ 260 (752)
|||||++|+....+ +.+.+|++.+++... +.... ..+..++|+|||+. |+..
T Consensus 130 ~spdg~~l~~g~~d-------------g~v~i~~~~~~~~~~~~~~~~-------------~~v~~~~~spdg~~-lasg 182 (321)
T 3ow8_A 130 FSPDSQYLATGTHV-------------GKVNIFGVESGKKEYSLDTRG-------------KFILSIAYSPDGKY-LASG 182 (321)
T ss_dssp ECTTSSEEEEECTT-------------SEEEEEETTTCSEEEEEECSS-------------SCEEEEEECTTSSE-EEEE
T ss_pred ECCCCCEEEEEcCC-------------CcEEEEEcCCCceeEEecCCC-------------ceEEEEEECCCCCE-EEEE
Confidence 99999999887655 378999998665433 22221 12567999999997 6555
Q ss_pred EeccCCCCccccCccceEEeccCCCCCCCC-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccce
Q 004456 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (752)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (752)
+ ..+.|.++|+ .++. ...+......+..++|+||++.|+.++ ....|.++++.++. ...
T Consensus 183 ~------------~dg~i~iwd~---~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s----~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 183 A------------IDGIINIFDI---ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS----DDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp E------------TTSCEEEEET---TTTEEEEEECCCSSCCCEEEECTTSCEEEEEC----TTSCEEEEETTTCC-EEE
T ss_pred c------------CCCeEEEEEC---CCCcEEEEEcccCCceeEEEEcCCCCEEEEEc----CCCeEEEEECCCcc-eeE
Confidence 3 3347888888 3333 333444556788999999999888876 23358888887641 112
Q ss_pred eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhh
Q 004456 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 419 (752)
Q Consensus 340 ~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 419 (752)
.+..+. .. .-.++|+|||++|+..+.++ .|.+||+.+++..........
T Consensus 243 ~~~~h~-~~------v~~~~~sp~~~~l~s~s~D~---------------------~v~iwd~~~~~~~~~~~~h~~--- 291 (321)
T 3ow8_A 243 TLSGHA-SW------VLNVAFCPDDTHFVSSSSDK---------------------SVKVWDVGTRTCVHTFFDHQD--- 291 (321)
T ss_dssp EECCCS-SC------EEEEEECTTSSEEEEEETTS---------------------CEEEEETTTTEEEEEECCCSS---
T ss_pred EEcCCC-Cc------eEEEEECCCCCEEEEEeCCC---------------------cEEEEeCCCCEEEEEEcCCCC---
Confidence 222111 11 11267999999988776321 489999988876544332211
Q ss_pred hceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEEC
Q 004456 420 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (752)
Q Consensus 420 ~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~ 459 (752)
.+.. ++|++|++.|+....+ ..|.+||.
T Consensus 292 -~v~~-------v~~s~~g~~l~s~~~d----~~i~vwd~ 319 (321)
T 3ow8_A 292 -QVWG-------VKYNGNGSKIVSVGDD----QEIHIYDC 319 (321)
T ss_dssp -CEEE-------EEECTTSSEEEEEETT----CCEEEEEC
T ss_pred -cEEE-------EEECCCCCEEEEEeCC----CeEEEEeC
Confidence 1233 4899999988654422 34777764
No 145
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.71 E-value=5.4e-16 Score=155.79 Aligned_cols=212 Identities=15% Similarity=0.141 Sum_probs=134.4
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++....+- ..|.||++||.+... .. +...+..|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g----------~~~~vvllHG~~~~~-----------~~----~~~~~~~L~~~g~~vi~---~D~ 54 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG----------SGQPIVFSHGWPLNA-----------DS----WESQMIFLAAQGYRVIA---HDR 54 (273)
T ss_dssp EECTTSCEEEEEEES----------CSSEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE---ECC
T ss_pred EecCCCcEEEEEEcC----------CCCEEEEECCCCCcH-----------HH----HhhHHhhHhhCCcEEEE---ECC
Confidence 455677777655441 136799999963210 11 22456678899999999 566
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 641 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~-- 641 (752)
+|+|.+... ........+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 55 RGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 778777443 223556677777776654 236899999999999999877665 899999999886421100
Q ss_pred --CccCccc-----------------------------c--c--cc------hhhh------------HHHHHhcChhhh
Q 004456 642 --TPFGFQT-----------------------------E--F--RT------LWEA------------TNVYIEMSPITH 668 (752)
Q Consensus 642 --~~~~~~~-----------------------------~--~--~~------~~~~------------~~~~~~~~~~~~ 668 (752)
....... . . .. .|.. ...+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 0000000 0 0 00 0000 000111122234
Q ss_pred cCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 669 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 669 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+.++++|+|+++|++|..+| +....+....+ -...++++++++||... .+.++.+.+.+.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAAL---VKGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHh---CCCcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 56789999999999999998 66433333332 13468999999999875 4667888899999985
No 146
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.71 E-value=1.9e-16 Score=161.04 Aligned_cols=214 Identities=20% Similarity=0.175 Sum_probs=136.1
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|.++....+-+.. +.|.||++||++... ..+ +.....++++||.|++ .+.+|+
T Consensus 12 ~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~-----------~~~----~~~~~~l~~~g~~vi~---~D~~G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAPE-------EKAKLMTMHGGPGMS-----------HDY----LLSLRDMTKEGITVLF---YDQFGC 66 (293)
T ss_dssp ETTEEEEEEEECCSS-------CSEEEEEECCTTTCC-----------SGG----GGGGGGGGGGTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEECCCC-------CCCeEEEEeCCCCcc-----------hhH----HHHHHHHHhcCcEEEE---ecCCCC
Confidence 367777766553311 137899999953110 111 1122345678999999 666788
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-----
Q 004456 570 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----- 641 (752)
Q Consensus 570 g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~----- 641 (752)
|.+.... .......+|+.++++.+. + .+++.|+||||||.+|+.+|.++|++++++|++++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~--~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF--G---NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH--T---TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc--C---CCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 8775443 234566777777777662 1 25899999999999999999999999999999988643100
Q ss_pred ------CccC-------------cccc-c--------------cchhhh--HHH---------HHh--------------
Q 004456 642 ------TPFG-------------FQTE-F--------------RTLWEA--TNV---------YIE-------------- 662 (752)
Q Consensus 642 ------~~~~-------------~~~~-~--------------~~~~~~--~~~---------~~~-------------- 662 (752)
.+.. +... . ...+.. ... +..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 0000 0000 0 000000 000 000
Q ss_pred -cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 663 -MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 663 -~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
.+....+.++++|+|+++|++| .++ +..++++.+.+. ..++++++++||... .+.++.+.+.+.+||.++|
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFILKHL 293 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTCC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCC----CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHhcC
Confidence 0112234567899999999999 666 777777666543 358999999999865 4567889999999998653
No 147
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.71 E-value=3e-16 Score=160.50 Aligned_cols=214 Identities=10% Similarity=0.070 Sum_probs=141.7
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|..+.....- +.|+||++||.+... ..| ..++..|+++||.|++ .+.+|+|
T Consensus 17 ~g~~l~~~~~g----------~~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~g~~v~~---~d~~G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEG----------SGQPVLFLHGNPTSS-----------YLW----RNIIPYVVAAGYRAVA---PDLIGMG 68 (309)
T ss_dssp TTEEEEEEEEE----------CSSEEEEECCTTCCG-----------GGG----TTTHHHHHHTTCEEEE---ECCTTST
T ss_pred CCeEEEEEEcC----------CCCEEEEECCCcchh-----------hhH----HHHHHHHHhCCCEEEE---EccCCCC
Confidence 67777765542 147899999964221 122 2356677889999999 5556777
Q ss_pred CCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccc
Q 004456 571 DKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT 648 (752)
Q Consensus 571 ~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~ 648 (752)
.+.... .......+|+.++++.+ ..++++|+||||||.+++.++.++|++++++|++++..........+..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc
Confidence 664432 34556677777766665 2368999999999999999999999999999999876442210000000
Q ss_pred c--------------------------------------ccchhhhHHHHHh-----------------c----------
Q 004456 649 E--------------------------------------FRTLWEATNVYIE-----------------M---------- 663 (752)
Q Consensus 649 ~--------------------------------------~~~~~~~~~~~~~-----------------~---------- 663 (752)
. ..........+.. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred cchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 0 0000000000000 0
Q ss_pred ----ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 664 ----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 664 ----~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+....+.++++|+|+++|++|..+| ...++++.+.+. ..++++++++||... .+.++.+.+.+.+||++
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 295 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVP----NLEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRR 295 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCC----CCEEEEecCCcccch-hhCHHHHHHHHHHHHHh
Confidence 0112245678999999999999998 888777776653 347777799999755 56788899999999999
Q ss_pred HhcCCC
Q 004456 740 YCLSNT 745 (752)
Q Consensus 740 ~l~~~~ 745 (752)
+..+..
T Consensus 296 ~~~~~~ 301 (309)
T 3u1t_A 296 NKPHAS 301 (309)
T ss_dssp HCCCCC
T ss_pred cchhhh
Confidence 986653
No 148
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.71 E-value=9.7e-16 Score=154.01 Aligned_cols=213 Identities=14% Similarity=0.116 Sum_probs=134.6
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
+...+|.++....+- ..|.||++||.+.. ...+......|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g----------~g~~vvllHG~~~~---------------~~~w~~~~~~l~~~g~~vi~---~D~ 54 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG----------QGRPVVFIHGWPLN---------------GDAWQDQLKAVVDAGYRGIA---HDR 54 (274)
T ss_dssp EECTTSCEEEEEEEC----------SSSEEEEECCTTCC---------------GGGGHHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEecC----------CCceEEEECCCcch---------------HHHHHHHHHHHHhCCCeEEE---EcC
Confidence 445677777665541 13679999996321 11122355678889999999 566
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004456 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 641 (752)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~-- 641 (752)
+|+|.+... ........+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 788777543 223556677777776665 236899999999999999877765 899999999886421100
Q ss_pred --CccCccccc------------------------c--------c------hhhh------------HHHHHhcChhhhc
Q 004456 642 --TPFGFQTEF------------------------R--------T------LWEA------------TNVYIEMSPITHA 669 (752)
Q Consensus 642 --~~~~~~~~~------------------------~--------~------~~~~------------~~~~~~~~~~~~~ 669 (752)
.+.+..... . . .|.. ...+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 000000000 0 0 0000 0001111223345
Q ss_pred CCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc-ccHHHHHHHHHHHHH
Q 004456 670 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQ 738 (752)
Q Consensus 670 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~ 738 (752)
.++++|+|+++|++|..+| +....+....+ -...++++++++||..... +.++.+.+.+.+||+
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhh---CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 7789999999999999998 66443333322 2346899999999987633 167888899999985
No 149
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.70 E-value=3.4e-16 Score=158.37 Aligned_cols=214 Identities=17% Similarity=0.104 Sum_probs=140.1
Q ss_pred EEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCC-ccCCCCchhHHHHHhCCcEEEecC
Q 004456 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAVLAGP 562 (752)
Q Consensus 484 ~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~G~~v~~~~ 562 (752)
...+...+|.++....+-|+. .|.||++||.+... . .| ...+..| +.+|.|++
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~~~-----------~~~w----~~~~~~L-~~~~~vi~-- 57 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPGGN-----------AYVL----REGLQDY-LEGFRVVY-- 57 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT--------SCEEEEECCTTTCC-----------SHHH----HHHHGGG-CTTSEEEE--
T ss_pred ceeEEeECCEEEEEEeecCCC--------CCEEEEECCCCCcc-----------hhHH----HHHHHHh-cCCCEEEE--
Confidence 334445678888877765432 47899999964211 1 11 1233344 57999999
Q ss_pred CCCCCCCCCCCC-C----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 563 SIPIIGEGDKLP-N----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 563 ~~~~~g~g~~~~-~----~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
.+.+|+|.+.. + ........+|+.+.++.+ ..+++.|+||||||.+|+.++.++|+ ++++|++++..
T Consensus 58 -~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~ 129 (286)
T 2yys_A 58 -FDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV 129 (286)
T ss_dssp -ECCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC
T ss_pred -ECCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc
Confidence 66778887764 3 224556677777776665 23689999999999999999999999 99999998864
Q ss_pred CCCC-C-cc--------------Cccc--c--c-----c-----ch-h-hhHH---H---------------HH---hcC
Q 004456 638 NKTL-T-PF--------------GFQT--E--F-----R-----TL-W-EATN---V---------------YI---EMS 664 (752)
Q Consensus 638 ~~~~-~-~~--------------~~~~--~--~-----~-----~~-~-~~~~---~---------------~~---~~~ 664 (752)
.... . .. .+.. . . . .. + ...+ . +. ..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (286)
T 2yys_A 130 NFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLD 209 (286)
T ss_dssp BHHHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCB
T ss_pred CcHHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCC
Confidence 2100 0 00 0000 0 0 0 00 0 0000 0 00 001
Q ss_pred hhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 665 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 665 ~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
....+.++++|+|+++|++|..+| .. ++.+.+ +... ++++++++||... .+.++.+.+.+.+||.+.
T Consensus 210 ~~~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~~----~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 210 YTPYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLRA----PIRVLPEAGHYLW-IDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp CGGGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHTC----CEEEETTCCSSHH-HHCHHHHHHHHHHHHHTT
T ss_pred hhhhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCCC----CEEEeCCCCCCcC-hhhHHHHHHHHHHHHHhh
Confidence 222356788999999999999998 77 777777 6543 7899999999865 456788999999999873
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=2.3e-15 Score=158.05 Aligned_cols=284 Identities=14% Similarity=0.104 Sum_probs=162.3
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
.+|+++.++. .+|+.+.++.. .......++|||||++|+++... ....+.-.+|.++.++|+.+++.......
T Consensus 27 ~~i~~~~~d~--~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~----~~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 27 KGIYTFRFNE--ETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEF----SKDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp CEEEEEEEET--TTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECC----SSTTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCEEEEEEeC--CCCCEEEeecc-cCCCCceEEECCCCCEEEEEEcc----CCCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 4688887754 44777777644 34456778999999999886541 11123345566666667776664332111
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
. ....+++ ||+.|+++... ...|.++++
T Consensus 100 ~--~p~~~~~--dg~~l~~~~~~------------------------------------------------~~~v~~~~~ 127 (361)
T 3scy_A 100 A--DPCYLTT--NGKNIVTANYS------------------------------------------------GGSITVFPI 127 (361)
T ss_dssp S--CEEEEEE--CSSEEEEEETT------------------------------------------------TTEEEEEEB
T ss_pred C--CcEEEEE--CCCEEEEEECC------------------------------------------------CCEEEEEEe
Confidence 0 1223344 99988876321 135666665
Q ss_pred --CCCccccCCc---------------cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCce-------
Q 004456 165 --DGTAKDFGTP---------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------- 220 (752)
Q Consensus 165 --~G~~~~l~~~---------------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~------- 220 (752)
+|....+... .....++|||||++|++..... ..+++|+++...
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT------------DQIHKFNINPNANADNKEK 195 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTCCTTTCCC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC------------CEEEEEEEcCCCCcccccc
Confidence 3333222110 1235689999999999876543 367888766432
Q ss_pred eE------EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE
Q 004456 221 VR------ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (752)
Q Consensus 221 ~~------~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (752)
.. .+.... ..+++.++|||||+. ||+... ..+.+.++++ +++....+
T Consensus 196 l~~~~~~~~~~~~~------------~~~~~~~~~spdg~~-l~v~~~-----------~~~~v~v~~~---~~g~~~~~ 248 (361)
T 3scy_A 196 FLTKGTPEAFKVAP------------GSGPRHLIFNSDGKF-AYLINE-----------IGGTVIAFRY---ADGMLDEI 248 (361)
T ss_dssp CEEEEEEEEEECCT------------TCCEEEEEECTTSSE-EEEEET-----------TTCEEEEEEE---ETTEEEEE
T ss_pred eeecccccceecCC------------CCCCeEEEEcCCCCE-EEEEcC-----------CCCeEEEEEe---cCCceEEe
Confidence 11 111111 123568999999997 666642 2346778877 33443333
Q ss_pred eecc------cceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEE
Q 004456 295 HKLD------LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (752)
Q Consensus 295 ~~~~------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~ 368 (752)
.... .....++|||||+.|+++.........+|.++..++ ....+....... ..-.++|||||++|+
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g~-----~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTGI-----HPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECSS-----CCCEEEECTTSCEEE
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCCC-----CCceEEECCCCCEEE
Confidence 2211 224578999999988776533134445666654453 322332221111 111377999999998
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
+.... .....+|.+|.++|+.+.+.
T Consensus 322 ~~~~~------------------~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 322 VACRD------------------TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEETT------------------TTEEEEEEECTTTCCEEECS
T ss_pred EEECC------------------CCCEEEEEEECCCCcEeecc
Confidence 88632 22234666888888877653
No 151
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.70 E-value=5.1e-16 Score=156.71 Aligned_cols=195 Identities=13% Similarity=0.124 Sum_probs=124.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~ 590 (752)
.|.||++||.+... ..|. .....|+++||.|++ ++.+|+|.+..+ ........+|+.+.+
T Consensus 27 g~~vvllHG~~~~~-----------~~w~----~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~a~dl~~ll 88 (281)
T 3fob_A 27 GKPVVLIHGWPLSG-----------RSWE----YQVPALVEAGYRVIT---YDRRGFGKSSQPWEGYEYDTFTSDLHQLL 88 (281)
T ss_dssp SEEEEEECCTTCCG-----------GGGT----TTHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCcH-----------HHHH----HHHHHHHhCCCEEEE---eCCCCCCCCCCCccccCHHHHHHHHHHHH
Confidence 36788999964211 1222 346678889999999 666788877543 233556677777766
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCC----CccCccc-c---------------
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTL----TPFGFQT-E--------------- 649 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~p~~~~~~v~~~~~~~~~~----~~~~~~~-~--------------- 649 (752)
+.+ ..+++.|+||||||.+++.+++. .|++++++|+.++...... .+.+... .
T Consensus 89 ~~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3fob_A 89 EQL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLA 162 (281)
T ss_dssp HHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHH
T ss_pred HHc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHH
Confidence 655 23689999999999987776554 5899999998876421100 0000000 0
Q ss_pred -----------------ccc------hhh------------hHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 650 -----------------FRT------LWE------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 650 -----------------~~~------~~~------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
... .|. ....+...+....+.++++|+|+++|++|.++| +..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~ 240 (281)
T 3fob_A 163 FLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVP--FEYS 240 (281)
T ss_dssp HHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSC--GGGT
T ss_pred HHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcC--HHHH
Confidence 000 000 000011122233467889999999999999998 7755
Q ss_pred HHHH-HHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 695 ERFF-DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 695 ~~~~-~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
.+.. +.+ ...++++++++||... .+.++.+.+.+.+||+
T Consensus 241 ~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 241 GKLTHEAI----PNSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp HHHHHHHS----TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred HHHHHHhC----CCceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 3333 333 3458999999999865 5678889999999984
No 152
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.70 E-value=1.5e-16 Score=173.31 Aligned_cols=249 Identities=12% Similarity=0.117 Sum_probs=158.9
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccC-----C---CCccCCCCchhHHH
Q 004456 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-----S---PNEFSGMTPTSSLI 550 (752)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~ 550 (752)
.+..+.+.|+..||.+|.+.+|+|++ .+++|+||+.||.+.........+.. + ...+..+....+..
T Consensus 38 ~~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 112 (560)
T 3iii_A 38 MIMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGF 112 (560)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHH
T ss_pred eEEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHH
Confidence 34577899999999999999999986 34699999999865331100000000 0 00011000123678
Q ss_pred HHhCCcEEEecCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 551 FLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
|+++||+|++. +.+|.|.+.... .+.....+|+.++++||.+++..| .||+++|+||||++++.+|+..|..+++
T Consensus 113 la~~Gy~vv~~---D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~a 188 (560)
T 3iii_A 113 WVPNDYVVVKV---ALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKA 188 (560)
T ss_dssp HGGGTCEEEEE---ECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEE
T ss_pred HHhCCCEEEEE---cCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEE
Confidence 99999999994 455665553322 233577899999999999988777 7999999999999999999999999999
Q ss_pred EEEccCCCCCCC---CccCccccc-cchhh---------------hH----------HHHHhcChhhhcCCCCCCEEEEE
Q 004456 630 GIARSGSYNKTL---TPFGFQTEF-RTLWE---------------AT----------NVYIEMSPITHANKIKKPILIIH 680 (752)
Q Consensus 630 ~v~~~~~~~~~~---~~~~~~~~~-~~~~~---------------~~----------~~~~~~~~~~~~~~~~~P~li~~ 680 (752)
+|..+|+.|... ..-+..... ...|. .. +.|...++ .++++++|+|+++
T Consensus 189 iv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~ 266 (560)
T 3iii_A 189 MIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCA 266 (560)
T ss_dssp EEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEE
T ss_pred EEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeC
Confidence 999999877321 111110000 00010 00 11222222 4678999999999
Q ss_pred eCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 681 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 681 G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
|-.|..+. ...+.+.++++... ...+++.+ .+|... .......+.+++||+++|++.+
T Consensus 267 Gw~D~~~~--~~g~l~~y~~l~~~--~k~l~ih~-~~~~~~--~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 267 SWSTQGLH--NRGSFEGFKQAASE--EKWLYVHG-RKEWES--YYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp EGGGTTTT--HHHHHHHHHHCCCS--SEEEEEES-SCHHHH--HHSHHHHHHHHHHHHHHTSCCC
T ss_pred CcCCCccc--chhHHHHHHhcccc--CcEEEECC-CCCcCc--ccChhHHHHHHHHHHHHhCCCC
Confidence 99997544 56666666665433 23344422 223210 0012456788999999998654
No 153
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=2e-15 Score=174.22 Aligned_cols=294 Identities=13% Similarity=0.058 Sum_probs=178.1
Q ss_pred eeEEeecC---CCCCCCCceeecC---CCCCc--eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceec
Q 004456 6 GIGIHRLL---PDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL 77 (752)
Q Consensus 6 ~i~~~~~~---~~~~~g~~~~i~~---~~~~~--~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~l 77 (752)
.||.++.. + ++.++|.. +..+. .+..++|||||++|||++... .+...+||++++++|+..+.
T Consensus 134 ~l~~~~~~~~~~----~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-----G~e~~~i~v~dl~tg~~~~~ 204 (741)
T 1yr2_A 134 QLLVRPADAPVG----TKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG-----GSDWRTVKFVGVADGKPLAD 204 (741)
T ss_dssp EEEEEETTSCTT----CCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET-----TCSEEEEEEEETTTCCEEEE
T ss_pred EEEEEcCCccCC----CCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC-----CCceEEEEEEECCCCCCCCc
Confidence 45777765 4 66676643 22222 578899999999999987521 12236899999999998665
Q ss_pred cCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhccc
Q 004456 78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (752)
Q Consensus 78 t~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (752)
+.... .+..++|||| +.|+|+........ +. . . +.....
T Consensus 205 ~~~~~-----~~~~~~wspD-~~l~~~~~~~~~~~--------~~-~--~------------------------~~~~~~ 243 (741)
T 1yr2_A 205 ELKWV-----KFSGLAWLGN-DALLYSRFAEPKEG--------QA-F--Q------------------------ALNYNQ 243 (741)
T ss_dssp EEEEE-----ESCCCEESTT-SEEEEEECCCC-------------------------------------------CCCCC
T ss_pred cCCCc-----eeccEEEECC-CEEEEEEecCcccc--------cc-c--c------------------------cCCCCC
Confidence 21110 1357899999 99999864321100 00 0 0 000125
Q ss_pred EEEEEcc-CCCc--cccCCc----cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCc--e-eEEecCC
Q 004456 158 QLVLGSL-DGTA--KDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--L-VRELCDL 227 (752)
Q Consensus 158 ~i~~~~~-~G~~--~~l~~~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~-~~~l~~~ 227 (752)
+||++++ ++.. +.+... .....+.|||||++|++.+.... ....+|+++|++++ + .+.+...
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT--------DPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT--------CSCCEEEEEEEETTEECCCEEEECS
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC--------CCcceEEEEECCCCCCcccEEecCC
Confidence 8999999 4432 233322 24678999999999999876531 11358999999876 4 5565543
Q ss_pred CCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCC--CCCeEEeecc-cceeee
Q 004456 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG--EKPEILHKLD-LRFRSV 304 (752)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~l~~~~-~~~~~~ 304 (752)
... ... .++|||+. |++.+..+ ..+..|+++++ ++ +..+.++... ..+..+
T Consensus 316 ~~~-------------~~~-~~~~dg~~-l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 316 LKA-------------QWD-FVDGVGDQ-LWFVSGDG--------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESV 369 (741)
T ss_dssp SSS-------------CEE-EEEEETTE-EEEEECTT--------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEE
T ss_pred CCc-------------eEE-EEeccCCE-EEEEECCC--------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEE
Confidence 211 222 35699998 88876432 13457999998 43 2345555333 334456
Q ss_pred eeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEc
Q 004456 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLN 384 (752)
Q Consensus 305 ~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 384 (752)
+|+ +..|++....+ ...+||++++++. ..+.+.-...... -.++++|||+.|++....
T Consensus 370 ~~~--~~~lv~~~~~d-g~~~l~~~~~~g~--~~~~l~~~~~~~v------~~~~~s~d~~~l~~~~ss----------- 427 (741)
T 1yr2_A 370 GIA--GNRLFASYIHD-AKSQVLAFDLDGK--PAGAVSLPGIGSA------SGLSGRPGDRHAYLSFSS----------- 427 (741)
T ss_dssp EEE--BTEEEEEEEET-TEEEEEEEETTSC--EEEECBCSSSCEE------EEEECCBTCSCEEEEEEE-----------
T ss_pred EEE--CCEEEEEEEEC-CEEEEEEEeCCCC--ceeeccCCCCeEE------EEeecCCCCCEEEEEEcC-----------
Confidence 666 55677665444 5568999998652 3333331111111 125689999988887632
Q ss_pred cCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 385 GRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 385 ~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
......||++|+.+|+.+.+.
T Consensus 428 ------~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 428 ------FTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp ------TTEEEEEEEEETTTTEEEECS
T ss_pred ------CCCCCEEEEEECCCCcEEEEe
Confidence 123446999999998866554
No 154
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.70 E-value=4.9e-16 Score=156.51 Aligned_cols=194 Identities=15% Similarity=0.043 Sum_probs=129.2
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHH
Q 004456 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVE 591 (752)
Q Consensus 514 P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~~~ 591 (752)
|.||++||.+... .. +......|+++||.|++ .+.+|+|.+..+. .......+|+.+.++
T Consensus 24 ~pvvllHG~~~~~-----------~~----~~~~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~ 85 (277)
T 1brt_A 24 QPVVLIHGFPLSG-----------HS----WERQSAALLDAGYRVIT---YDRRGFGQSSQPTTGYDYDTFAADLNTVLE 85 (277)
T ss_dssp SEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCcH-----------HH----HHHHHHHHhhCCCEEEE---eCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 4499999964211 11 22456678889999999 6667888775432 345667788888777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCC----ccC-cccc------------c---
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT----PFG-FQTE------------F--- 650 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-~~~~~v~~~~~~~~~~~----~~~-~~~~------------~--- 650 (752)
.+. .+++.|+||||||.+++.++.++|+ +++++|++++....... +.+ .... .
T Consensus 86 ~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T 1brt_A 86 TLD------LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp HHT------CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHH
T ss_pred HhC------CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhh
Confidence 662 3689999999999999999999998 99999999874321110 000 0000 0
Q ss_pred ---------c--------chhhhHHHHH------------------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHH-
Q 004456 651 ---------R--------TLWEATNVYI------------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA- 694 (752)
Q Consensus 651 ---------~--------~~~~~~~~~~------------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~- 694 (752)
. ........+. ..+....+.++++|+|+++|++|..+| +..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~ 237 (277)
T 1brt_A 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP--IENTA 237 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC--GGGTH
T ss_pred HHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCC--hHHHH
Confidence 0 0000000000 011122356788999999999999998 7776
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+.+.+.+. ..++++++++||... .+.++.+.+.+.+||.
T Consensus 238 ~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 238 RVFHKALP----SAEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp HHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHCC----CCcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 66665543 358999999999865 4567888889999985
No 155
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.70 E-value=3.7e-16 Score=165.09 Aligned_cols=186 Identities=16% Similarity=0.130 Sum_probs=128.4
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCC----------------
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------------- 574 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---------------- 574 (752)
+++|+||++||++.. ...+...+..|+++||+|++++.+ |.|.+..
T Consensus 96 ~~~P~Vv~~HG~~~~---------------~~~~~~~a~~La~~Gy~V~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~ 157 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF---------------RTLYSAIGIDLASHGFIVAAVEHR---DRSASATYYFKDQSAAEIGDKSW 157 (383)
T ss_dssp SCEEEEEEECCTTCC---------------TTTTHHHHHHHHHTTCEEEEECCC---SSCSSEEEECSSHHHHHHTCCEE
T ss_pred CCCCEEEEcCCCCCC---------------chHHHHHHHHHHhCceEEEEeccC---CCCccceeecCCccccccCCcee
Confidence 368999999997421 111235788999999999996554 3332210
Q ss_pred -------Cc-h------hHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeChHHHHHHHHH
Q 004456 575 -------ND-R------FVEQLVSSAEAAVEEVVR--------------------RGVADPSRIAVGGHSYGAFMTAHLL 620 (752)
Q Consensus 575 -------~~-~------~~~~~~~d~~~~~~~l~~--------------------~~~~d~~~i~l~G~S~GG~~a~~~~ 620 (752)
+. . ......+|+..+++++.+ ...+|.+||+++||||||++++.++
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 237 (383)
T 3d59_A 158 LYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL 237 (383)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHH
Confidence 00 0 112235788899999976 3456788999999999999999998
Q ss_pred HhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHH
Q 004456 621 AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 700 (752)
Q Consensus 621 ~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 700 (752)
.+.+ +++++|+++|.... . . ...+.++++|+|++||++|..+ .... ..++
T Consensus 238 ~~~~-~v~a~v~~~~~~~p----~----~----------------~~~~~~i~~P~Lii~g~~D~~~----~~~~-~~~~ 287 (383)
T 3d59_A 238 SEDQ-RFRCGIALDAWMFP----L----G----------------DEVYSRIPQPLFFINSEYFQYP----ANII-KMKK 287 (383)
T ss_dssp HHCT-TCCEEEEESCCCTT----C----C----------------GGGGGSCCSCEEEEEETTTCCH----HHHH-HHHT
T ss_pred hhCC-CccEEEEeCCccCC----C----c----------------hhhhccCCCCEEEEecccccch----hhHH-HHHH
Confidence 8875 69999999884321 0 0 0123567899999999999753 3333 3355
Q ss_pred HHhCCCcEEEEEeCCCCccCCc------------------cccH----HHHHHHHHHHHHHHhcCC
Q 004456 701 LKGHGALSRLVLLPFEHHVYAA------------------RENV----MHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 701 l~~~~~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~~~~fl~~~l~~~ 744 (752)
+...+.+.+++++++++|.+.. .... +.+.+.+++||+++|+..
T Consensus 288 l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 288 CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 6566778999999999998521 1112 234457999999999764
No 156
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.70 E-value=2.3e-16 Score=156.88 Aligned_cols=199 Identities=9% Similarity=-0.014 Sum_probs=130.0
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...| ..+...|+++||.|++ .+.+|+|.+.... .......+|+.+.
T Consensus 4 g~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 65 (258)
T 3dqz_A 4 KHHFVLVHNAYHG-----------AWIW----YKLKPLLESAGHRVTA---VELAASGIDPRPIQAVETVDEYSKPLIET 65 (258)
T ss_dssp CCEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSSCGGGCCSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCc-----------cccH----HHHHHHHHhCCCEEEE---ecCCCCcCCCCCCCccccHHHhHHHHHHH
Confidence 3899999996421 1122 2467788899999999 5666777775432 2344555555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-------------cccccc-----
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-------------FQTEFR----- 651 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~-------------~~~~~~----- 651 (752)
++.+ . . .+++.|+||||||++++.++.++|++++++|++++.......... ......
T Consensus 66 l~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (258)
T 3dqz_A 66 LKSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETR 140 (258)
T ss_dssp HHTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEET
T ss_pred HHHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhh
Confidence 4443 2 1 268999999999999999999999999999999885432111100 000000
Q ss_pred ----------c-----------hhhhHHHHHh--------------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHH
Q 004456 652 ----------T-----------LWEATNVYIE--------------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 696 (752)
Q Consensus 652 ----------~-----------~~~~~~~~~~--------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 696 (752)
. .......+.. ..........++|+|+++|++|..+| +...+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~ 218 (258)
T 3dqz_A 141 NGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRW 218 (258)
T ss_dssp TEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHH
T ss_pred ccChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHH
Confidence 0 0000000000 01111112235899999999999998 888877
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 697 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
+.+.+.. .++++++++||... .+.++.+.+.+.+|++++|
T Consensus 219 ~~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 219 MIDNFNV----SKVYEIDGGDHMVM-LSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHHSCC----SCEEEETTCCSCHH-HHSHHHHHHHHHHHHHHTC
T ss_pred HHHhCCc----ccEEEcCCCCCchh-hcChHHHHHHHHHHHHHhC
Confidence 7766532 37899999999865 5678889999999999875
No 157
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.69 E-value=9.6e-17 Score=171.08 Aligned_cols=233 Identities=16% Similarity=0.137 Sum_probs=151.1
Q ss_pred EEcCCCcEEEEEEEeCCCC-CCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH----hCCc---EE
Q 004456 487 YQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF---AV 558 (752)
Q Consensus 487 ~~~~~g~~~~~~l~~P~~~-~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~G~---~v 558 (752)
+...+|..+.+..+.|.+. .+...++.|+||++||.+... ..|. .++..|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-----------~~~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-----------VVWE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-----------GGGG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-----------HHHH----HHHHHHHHhhhhcCcceeEE
Confidence 3456889999999988641 011123468999999964221 1121 2344556 3489 99
Q ss_pred EecCCCCCCCCCCCCC-------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004456 559 LAGPSIPIIGEGDKLP-------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 631 (752)
Q Consensus 559 ~~~~~~~~~g~g~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v 631 (752)
++ .+.+|+|.+.. .........+|+.++++.+...-.++..+++|+||||||.+++.++.++|++++++|
T Consensus 90 i~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LL---IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EE---ECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EE---EcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 99 55567765522 122345667777777766532212344459999999999999999999999999999
Q ss_pred EccCCCCCCC--------CccC---cc------------cccc------------chh-----hhHHHHHh---------
Q 004456 632 ARSGSYNKTL--------TPFG---FQ------------TEFR------------TLW-----EATNVYIE--------- 662 (752)
Q Consensus 632 ~~~~~~~~~~--------~~~~---~~------------~~~~------------~~~-----~~~~~~~~--------- 662 (752)
+++|...... .... .. .... ..+ .....+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998755310 0000 00 0000 000 00001100
Q ss_pred ---------------------------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 004456 663 ---------------------------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 715 (752)
Q Consensus 663 ---------------------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 715 (752)
......+.++++|+|+++|++|.++| +..++.+.+.+ ..++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~----~~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTL----QNYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHC----SSEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhC----CCceEEEeCC
Confidence 01123456789999999999999998 88877776655 3578999999
Q ss_pred CCccCCccccHHHHHHHHHHHHHHHhcCC
Q 004456 716 EHHVYAARENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 716 ~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 744 (752)
+||... .+.+..+.+.+.+||.+++...
T Consensus 321 ~gH~~~-~e~p~~~~~~i~~fl~~~~~~~ 348 (398)
T 2y6u_A 321 GSHLVN-VEAPDLVIERINHHIHEFVLTS 348 (398)
T ss_dssp CCTTHH-HHSHHHHHHHHHHHHHHHHHHS
T ss_pred CCccch-hcCHHHHHHHHHHHHHHHHHhH
Confidence 999765 4567889999999999988654
No 158
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.69 E-value=1.1e-16 Score=169.33 Aligned_cols=219 Identities=13% Similarity=0.135 Sum_probs=137.1
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCC-------CccCCCCchhHH
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-------NEFSGMTPTSSL 549 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 549 (752)
...+..+.+.+.+.+|..+.+++++|++. .++.|+||++||++.... .+.+.. ..|......++.
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~----~~~~~~g~~~~~~~~y~~~~~~~a~ 158 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKE----GLAGEPGIAPKLNDRYKDPKLTQAL 158 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHH----HHHTCCCSSSTTCCSTTCTTTCHHH
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcc----cccccccccccccccccchHHHHHH
Confidence 45567899999999999999999999863 346899999999754211 000000 011111114678
Q ss_pred HHHhCCcEEEecCCCCCCCCCCCCCC----------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Q 004456 550 IFLARRFAVLAGPSIPIIGEGDKLPN----------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVG 607 (752)
Q Consensus 550 ~l~~~G~~v~~~~~~~~~g~g~~~~~----------------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~ 607 (752)
.|+++||+|++++. +|+|++... .......+.|+.++++||.++..+|.+||+|+
T Consensus 159 ~la~~Gy~Vl~~D~---rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~ 235 (398)
T 3nuz_A 159 NFVKEGYIAVAVDN---PAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVS 235 (398)
T ss_dssp HHHTTTCEEEEECC---TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEE
T ss_pred HHHHCCCEEEEecC---CCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 99999999999554 455444211 12233456899999999999988999999999
Q ss_pred EeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-----Cc---cC---ccccccchhhhHHHHHhcChhhhcCC-CCCC
Q 004456 608 GHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-----TP---FG---FQTEFRTLWEATNVYIEMSPITHANK-IKKP 675 (752)
Q Consensus 608 G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~-----~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 675 (752)
||||||++|+.+++.. ++++++|+.+++..... .. .+ ++...... .+..+...+....+.. ...|
T Consensus 236 G~S~GG~~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~ap~P 312 (398)
T 3nuz_A 236 GFSLGTEPMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHL--IPDFWKNFNFPDIVAALAPRP 312 (398)
T ss_dssp EEGGGHHHHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGC--CTTHHHHCCHHHHHHHTTTSC
T ss_pred EECHhHHHHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHHh--cchHhhhCCHHHHHHhhCCCc
Confidence 9999999999988886 56888888765433100 00 00 00000000 0001111222111111 1469
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 004456 676 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 714 (752)
Q Consensus 676 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 714 (752)
+||+||+.|.. ..+++++++++.. ..++++++||
T Consensus 313 lLii~G~~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 313 IILTEGGLDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp EEECSCBCHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred EEEeeCCchHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 99999999954 4566666665533 3567777777
No 159
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.69 E-value=3.8e-16 Score=164.99 Aligned_cols=154 Identities=10% Similarity=0.040 Sum_probs=107.2
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCC---CccCCCCchhHHHHHh
Q 004456 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP---NEFSGMTPTSSLIFLA 553 (752)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ 553 (752)
...+..+.+.+.+.+|..+.+++++|++. .++.|+||++||.+.......+.....+ ..+......++..|++
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~ 157 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVK 157 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHT
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHH
Confidence 35577889999999999999999999763 3468999999997543110000000000 0000001146788999
Q ss_pred CCcEEEecCCCCCCCCCCCCCCc--------h--------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeCh
Q 004456 554 RRFAVLAGPSIPIIGEGDKLPND--------R--------------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY 611 (752)
Q Consensus 554 ~G~~v~~~~~~~~~g~g~~~~~~--------~--------------~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~ 611 (752)
+||+|++++ .+|+|++.... . .....+.|+.+++++|.++..+|.+||+|+||||
T Consensus 158 ~G~~Vl~~D---~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~ 234 (391)
T 3g8y_A 158 EGYVAVAVD---NAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSL 234 (391)
T ss_dssp TTCEEEECC---CTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGG
T ss_pred CCCEEEEec---CCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEECh
Confidence 999999954 44555443221 0 1122347999999999999989999999999999
Q ss_pred HHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 612 GAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 612 GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
||++++.+++.. ++++++|+.+++..
T Consensus 235 GG~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 235 GTEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred hHHHHHHHHHcC-CceeEEEEccCCCC
Confidence 999999998886 57899998776544
No 160
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.69 E-value=1.3e-15 Score=155.19 Aligned_cols=211 Identities=14% Similarity=0.066 Sum_probs=137.1
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|.++.+..+-|++ .|.||++||.+... ..| ...++..|+++||.|++ .+.+|+
T Consensus 8 ~~g~~l~y~~~G~~~--------~~~vvllHG~~~~~-----------~~w---~~~~~~~L~~~G~~vi~---~D~rG~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA--------DPALLLVMGGNLSA-----------LGW---PDEFARRLADGGLHVIR---YDHRDT 62 (298)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGS---CHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEeccCCC--------CCeEEEEcCCCCCc-----------cch---HHHHHHHHHhCCCEEEe---eCCCCC
Confidence 477788777664322 47899999964210 111 11234678889999999 566788
Q ss_pred CCCCC--C---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC-CC----
Q 004456 570 GDKLP--N---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY-NK---- 639 (752)
Q Consensus 570 g~~~~--~---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~-~~---- 639 (752)
|.+.. + ........+|+.+.++.+ +.+++.|+||||||.+|+.++.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 77754 1 123566677777777665 23689999999999999999999999999999988654 21
Q ss_pred -------------CCCccC------c-c----c-cc-----------------cchhhhH-------HHHHhc-------
Q 004456 640 -------------TLTPFG------F-Q----T-EF-----------------RTLWEAT-------NVYIEM------- 663 (752)
Q Consensus 640 -------------~~~~~~------~-~----~-~~-----------------~~~~~~~-------~~~~~~------- 663 (752)
...... + . . .. ...+... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 0 0 0 00 0000000 000000
Q ss_pred ----------Chhhh-cCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHH
Q 004456 664 ----------SPITH-ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 732 (752)
Q Consensus 664 ----------~~~~~-~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 732 (752)
+.... +.++++|+|+++|++|..+| +..++.+.+.+ ...+++++|++|| +.++.+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gH-----e~p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLI----PTARLAEIPGMGH-----ALPSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTS----TTEEEEEETTCCS-----SCCGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhC----CCCEEEEcCCCCC-----CCcHHHHHH
Confidence 01123 66788999999999999998 77766665543 3569999999999 234577888
Q ss_pred HHHHHHHHhc
Q 004456 733 TDRWLQKYCL 742 (752)
Q Consensus 733 ~~~fl~~~l~ 742 (752)
+.+||.+++.
T Consensus 286 i~~fl~~~~~ 295 (298)
T 1q0r_A 286 LAEVILAHTR 295 (298)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 161
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.69 E-value=2.9e-17 Score=157.86 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=132.1
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCch--hHHHHHhCCcEEEecCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVLAGPSIPII 567 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~~~~~ 567 (752)
.+|.++.+..+.|++ ..+.|+||++||.+... ..+ .. ++..|+++||.|++++ .+
T Consensus 14 ~~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~~-----------~~~----~~~~~~~~l~~~G~~v~~~d---~~ 70 (210)
T 1imj_A 14 VQGQALFFREALPGS-----GQARFSVLLLHGIRFSS-----------ETW----QNLGTLHRLAQAGYRAVAID---LP 70 (210)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCCH-----------HHH----HHHTHHHHHHHTTCEEEEEC---CT
T ss_pred eCCeEEEEEEeCCCC-----CCCCceEEEECCCCCcc-----------cee----ecchhHHHHHHCCCeEEEec---CC
Confidence 378899999998865 22479999999964211 111 12 3668889999999944 45
Q ss_pred CCCCCCCCc--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc
Q 004456 568 GEGDKLPND--RFVEQLV--SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 643 (752)
Q Consensus 568 g~g~~~~~~--~~~~~~~--~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~ 643 (752)
|+|.+.... ....... +++.++++.+ +.++++++|||+||.+++.++.++|++++++|+++|.....
T Consensus 71 g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~--- 141 (210)
T 1imj_A 71 GLGHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--- 141 (210)
T ss_dssp TSGGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---
T ss_pred CCCCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc---
Confidence 555443221 1122222 5555555554 23689999999999999999999999999999999864311
Q ss_pred cCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc
Q 004456 644 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 723 (752)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 723 (752)
.....+.++++|+++++|++|. ++ ...++.+ +. -.+.+++++++++|.+. .
T Consensus 142 --------------------~~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~----~~~~~~~~~~~~~H~~~-~ 192 (210)
T 1imj_A 142 --------------------INAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQ----LPNHRVLIMKGAGHPCY-L 192 (210)
T ss_dssp --------------------SCHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TT----SSSEEEEEETTCCTTHH-H
T ss_pred --------------------ccchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hh----CCCCCEEEecCCCcchh-h
Confidence 0112345678999999999999 87 6665554 33 34679999999999854 3
Q ss_pred ccHHHHHHHHHHHHHH
Q 004456 724 ENVMHVIWETDRWLQK 739 (752)
Q Consensus 724 ~~~~~~~~~~~~fl~~ 739 (752)
+.+..+.+.+.+||++
T Consensus 193 ~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 193 DKPEEWHTGLLDFLQG 208 (210)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHh
Confidence 4466778888899875
No 162
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.69 E-value=1.8e-15 Score=150.65 Aligned_cols=206 Identities=15% Similarity=0.073 Sum_probs=135.7
Q ss_pred EEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCC
Q 004456 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (752)
Q Consensus 486 ~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (752)
.+...+|..+.....- +.|.||++||.+... .. +..++..|+ +||.|++ .+
T Consensus 6 ~~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~----~~~~~~~l~-~~~~vi~---~d 56 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG----------SGPPVVLVGGALSTR-----------AG----GAPLAERLA-PHFTVIC---YD 56 (262)
T ss_dssp EEECTTSCEEEEEEEE----------CSSEEEEECCTTCCG-----------GG----GHHHHHHHT-TTSEEEE---EC
T ss_pred eEEcCCCcEEEEEEcC----------CCCcEEEECCCCcCh-----------HH----HHHHHHHHh-cCcEEEE---Ee
Confidence 3455688888766642 137899999964211 11 123455565 8999999 55
Q ss_pred CCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc
Q 004456 566 IIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 644 (752)
Q Consensus 566 ~~g~g~~~~~~-~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~ 644 (752)
.+|+|.+.... .......+|+.++++.+ + +++.++|||+||.+++.++.++| +++++|+++|.........
T Consensus 57 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~ 128 (262)
T 3r0v_A 57 RRGRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP 128 (262)
T ss_dssp CTTSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC
T ss_pred cCCCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc
Confidence 66777664432 23455666666666554 2 58999999999999999999999 9999999998754321110
Q ss_pred Cccccc-------------------------cchhhhHHHHH------------------------hcChhhhcCCCCCC
Q 004456 645 GFQTEF-------------------------RTLWEATNVYI------------------------EMSPITHANKIKKP 675 (752)
Q Consensus 645 ~~~~~~-------------------------~~~~~~~~~~~------------------------~~~~~~~~~~~~~P 675 (752)
...... .......+.+. ...+...+.++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 208 (262)
T 3r0v_A 129 PVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP 208 (262)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC
T ss_pred hhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC
Confidence 000000 00000000000 00123456778999
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 676 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 676 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+|+++|++|..+| +..++.+.+.+ ...++++++++||. +.++.+.+.+.+||+
T Consensus 209 ~lii~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 209 TLVMDGGASPAWI--RHTAQELADTI----PNARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEEECTTCCHHH--HHHHHHHHHHS----TTEEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEEeecCCCCCC--HHHHHHHHHhC----CCCeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 9999999999988 78777777655 34689999999993 457788888999985
No 163
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.69 E-value=2.6e-16 Score=157.38 Aligned_cols=199 Identities=10% Similarity=0.002 Sum_probs=129.2
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEA 588 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~ 588 (752)
..|+||++||.+... .. +..+...|+++||.|++ .+.+|+|.+.... .......+|+.+
T Consensus 11 ~~~~vvllHG~~~~~-----------~~----~~~~~~~l~~~g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 72 (267)
T 3sty_A 11 VKKHFVLVHAAFHGA-----------WC----WYKIVALMRSSGHNVTA---LDLGASGINPKQALQIPNFSDYLSPLME 72 (267)
T ss_dssp CCCEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCc-----------ch----HHHHHHHHHhcCCeEEE---eccccCCCCCCcCCccCCHHHHHHHHHH
Confidence 369999999964211 11 22466788889999999 5666888775542 234455555555
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc--------------c---Ccc----
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--------------F---GFQ---- 647 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~--------------~---~~~---- 647 (752)
.++.+ . +.+++.|+||||||.+++.++.++|++++++|++++........ + .+.
T Consensus 73 ~l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T 3sty_A 73 FMASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENG 147 (267)
T ss_dssp HHHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTC
T ss_pred HHHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhh
Confidence 54443 2 34789999999999999999999999999999988754211100 0 000
Q ss_pred --ccccch----------------hhhHHH---------------HHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 648 --TEFRTL----------------WEATNV---------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 648 --~~~~~~----------------~~~~~~---------------~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
...... ...... +............++|+|+++|++|..+| +...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~ 225 (267)
T 3sty_A 148 PTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFL 225 (267)
T ss_dssp TTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHH
T ss_pred hhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHH
Confidence 000000 000000 10011111111224899999999999988 7877
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
+++.+.+. ..++++++++||... .+.++.+.+.+.+|++++
T Consensus 226 ~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 226 KLMIEKNP----PDEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHSC----CSEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHHhCC----CceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 77766653 358999999999865 567888999999999874
No 164
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.69 E-value=9.1e-15 Score=156.83 Aligned_cols=254 Identities=11% Similarity=0.114 Sum_probs=154.0
Q ss_pred eeceeEecCCCC-eEEEeeccccccccccCcceEEEEEc----ccCc-------ceeccCCCCcc-----ccccccceEE
Q 004456 32 KINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA----ETGE-------AKPLFESPDIC-----LNAVFGSFVW 94 (752)
Q Consensus 32 ~~~~~~~SPDG~-~ia~~~~~~~~~~~~~~~~~l~v~~~----~~g~-------~~~lt~~~~~~-----~~~~~~~~~w 94 (752)
.+...+|||||+ +||... ....|.++++ .+++ ...+....... ....+..+.|
T Consensus 47 ~v~~~~~s~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGE----------KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp CCSEEEECSSCTTEEEEEE----------TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred ceEEEEECCCCCcEEEEec----------CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 588899999999 888753 3467888888 7766 22222210000 1114678899
Q ss_pred ecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCC
Q 004456 95 VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT 173 (752)
Q Consensus 95 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~ 173 (752)
+|||+.|+..+.. +.|.+++.+| ....+..
T Consensus 117 s~~~~~l~~~~~d-------------------------------------------------g~i~i~~~~~~~~~~~~~ 147 (425)
T 1r5m_A 117 SHDGNSIVTGVEN-------------------------------------------------GELRLWNKTGALLNVLNF 147 (425)
T ss_dssp CTTSSEEEEEETT-------------------------------------------------SCEEEEETTSCEEEEECC
T ss_pred cCCCCEEEEEeCC-------------------------------------------------CeEEEEeCCCCeeeeccC
Confidence 9999999876321 4677778766 4445554
Q ss_pred c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCC---------------------
Q 004456 174 P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE--------------------- 231 (752)
Q Consensus 174 ~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~--------------------- 231 (752)
+ ..+..+.|+|||++|+....+. .+.+|++.+++...........
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (425)
T 1r5m_A 148 HRAPIVSVKWNKDGTHIISMDVEN-------------VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEW 214 (425)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTC-------------CEEEEETTTTEEEEEECCC---------------CCCBSCCEE
T ss_pred CCccEEEEEECCCCCEEEEEecCC-------------eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEE
Confidence 5 7889999999999999876553 5666776555433222111110
Q ss_pred -----------------------CCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCC
Q 004456 232 -----------------------DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG 288 (752)
Q Consensus 232 -----------------------~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (752)
.....+......+..+.|+|||+. |+... ..+.+.++++. .+
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~------------~d~~i~i~d~~--~~ 279 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL-LLSAS------------DDGTLRIWHGG--NG 279 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE-EEEEE------------TTSCEEEECSS--SB
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE-EEEEc------------CCCEEEEEECC--CC
Confidence 000011122334667899999985 55543 34478888883 23
Q ss_pred CCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEE
Q 004456 289 EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (752)
Q Consensus 289 ~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~ 368 (752)
.....+......+..++|+||+ .++... ....|.++++.++ +.......... ....++|+|+|++|+
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~----~d~~i~i~d~~~~--~~~~~~~~~~~------~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCS----MDGSVRLWSLKQN--TLLALSIVDGV------PIFAGRISQDGQKYA 346 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEE----TTSEEEEEETTTT--EEEEEEECTTC------CEEEEEECTTSSEEE
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEe----CCCcEEEEECCCC--cEeEecccCCc------cEEEEEEcCCCCEEE
Confidence 3444555566778899999999 566554 3346888898774 22222221111 111267999999988
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc
Q 004456 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (752)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (752)
....+ | .|.+||+.+++
T Consensus 347 ~~~~d-------------g--------~i~i~~~~~~~ 363 (425)
T 1r5m_A 347 VAFMD-------------G--------QVNVYDLKKLN 363 (425)
T ss_dssp EEETT-------------S--------CEEEEECHHHH
T ss_pred EEECC-------------C--------eEEEEECCCCc
Confidence 87622 1 48888887665
No 165
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.69 E-value=6.7e-16 Score=155.65 Aligned_cols=210 Identities=13% Similarity=0.097 Sum_probs=132.9
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecC
Q 004456 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (752)
Q Consensus 483 ~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (752)
+...+. .+|..+.+..+.|++ .|+||++||.+... .. +..++..|+++||.|++
T Consensus 5 ~~~~~~-~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~~-----------~~----~~~~~~~l~~~G~~v~~-- 58 (286)
T 3qit_A 5 EEKFLE-FGGNQICLCSWGSPE--------HPVVLCIHGILEQG-----------LA----WQEVALPLAAQGYRVVA-- 58 (286)
T ss_dssp EEEEEE-ETTEEEEEEEESCTT--------SCEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE--
T ss_pred hhheee-cCCceEEEeecCCCC--------CCEEEEECCCCccc-----------ch----HHHHHHHhhhcCeEEEE--
Confidence 333443 478889988886543 58999999964211 11 22467788999999999
Q ss_pred CCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 563 SIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 563 ~~~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
.+.+|+|.+.... .......+|+.++++.+ +.++++++|||+||++++.++.++|++++++|++++...
T Consensus 59 -~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 59 -PDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp -ECCTTSTTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred -ECCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 5556777664433 22344455555544433 336899999999999999999999999999999998754
Q ss_pred CCCCc-cC--------------------cccccc---------chh--hhHHHH--------------------------
Q 004456 639 KTLTP-FG--------------------FQTEFR---------TLW--EATNVY-------------------------- 660 (752)
Q Consensus 639 ~~~~~-~~--------------------~~~~~~---------~~~--~~~~~~-------------------------- 660 (752)
..... .. +..... ..+ .....+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T 3qit_A 132 AEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSIL 211 (286)
T ss_dssp CCC---CCHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHH
T ss_pred CccccchhhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccc
Confidence 32211 00 000000 000 000000
Q ss_pred -------HhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHH
Q 004456 661 -------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 733 (752)
Q Consensus 661 -------~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 733 (752)
...+....+.++++|+|+++|++|..+| ....+.+.+.+. .++++++++ ||... .+.++.+.+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g-gH~~~-~e~p~~~~~~i 283 (286)
T 3qit_A 212 GLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMT----QAKRVFLSG-GHNLH-IDAAAALASLI 283 (286)
T ss_dssp TTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHST----TSEEEEESS-SSCHH-HHTHHHHHHHH
T ss_pred cccccccchhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCC----CCeEEEeeC-CchHh-hhChHHHHHHh
Confidence 1111222345678999999999999998 888777766553 358999999 99765 34454444433
No 166
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=8e-17 Score=161.62 Aligned_cols=227 Identities=12% Similarity=0.066 Sum_probs=143.8
Q ss_pred CCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH-HhCC
Q 004456 478 ASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR 555 (752)
Q Consensus 478 ~~~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G 555 (752)
.....+.+++.+. .|..+.+++|+|+++++.+ ++|+|+++||+++.. ..... ......+ ++.|
T Consensus 14 ~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~------------~~~~~-~~~~~~~~~~~g 78 (275)
T 2qm0_A 14 ITSNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ------------TFHEA-VKIQSVRAEKTG 78 (275)
T ss_dssp CCTTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH------------HHHHH-HHHHGGGHHHHC
T ss_pred ecCCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH------------HHHHH-HHHHhhcchhcC
Confidence 3356788888876 6889999999999876543 599999999963100 00000 0011112 3457
Q ss_pred ---cEEEecCCCCCC---------CCCCCCC-------------Cchh-HHHHHHHH-HHHHHHHHHcCCCCCCcEEEEE
Q 004456 556 ---FAVLAGPSIPII---------GEGDKLP-------------NDRF-VEQLVSSA-EAAVEEVVRRGVADPSRIAVGG 608 (752)
Q Consensus 556 ---~~v~~~~~~~~~---------g~g~~~~-------------~~~~-~~~~~~d~-~~~~~~l~~~~~~d~~~i~l~G 608 (752)
+.|+.+++.+.. .++.... .... .....+.+ .+++.++.++..+|+++++|+|
T Consensus 79 ~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G 158 (275)
T 2qm0_A 79 VSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFG 158 (275)
T ss_dssp CCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEE
T ss_pred CCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 899886554311 0110000 0000 01222222 2455677776667888999999
Q ss_pred eChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCC
Q 004456 609 HSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 688 (752)
Q Consensus 609 ~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~ 688 (752)
|||||++++.++.++|+.|+++++++|...+. .. ......+.+.... ......+|++++||+.|..++
T Consensus 159 ~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~-------~~--~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~ 226 (275)
T 2qm0_A 159 HXLGGLFALHILFTNLNAFQNYFISSPSIWWN-------NK--SVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM 226 (275)
T ss_dssp ETHHHHHHHHHHHHCGGGCSEEEEESCCTTHH-------HH--GGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH
T ss_pred ecchhHHHHHHHHhCchhhceeEEeCceeeeC-------hH--HHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh
Confidence 99999999999999999999999999864210 00 0000000111100 023456899999999999877
Q ss_pred CCHHHHHHHHHHH---HhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHH
Q 004456 689 LFPMQAERFFDAL---KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 689 ~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 737 (752)
..++++++++| +..|.++++.++|+++|... ....+...+.||
T Consensus 227 --~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 227 --VVGANELSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp --HHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 89999999999 55778899999999999643 333445556665
No 167
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.68 E-value=1.1e-15 Score=160.67 Aligned_cols=178 Identities=15% Similarity=0.126 Sum_probs=120.5
Q ss_pred HHhCCcEEEecCCCCCCC--CCCCCCC---------------chhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEEeChH
Q 004456 551 FLARRFAVLAGPSIPIIG--EGDKLPN---------------DRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYG 612 (752)
Q Consensus 551 l~~~G~~v~~~~~~~~~g--~g~~~~~---------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i-~l~G~S~G 612 (752)
|++.||.|++++ .+| +|.+... ........+|+.++++.+ +.+++ .|+|||||
T Consensus 85 l~~~g~~vi~~D---~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~G 155 (366)
T 2pl5_A 85 FDTNQYFIICSN---VIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMG 155 (366)
T ss_dssp EETTTCEEEEEC---CTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHH
T ss_pred ccccccEEEEec---CCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCcc
Confidence 457899999944 445 5544321 123455566666665543 23688 89999999
Q ss_pred HHHHHHHHHhCCCceeEEEEccCCCCCCCCc---------------------c------------------Cc-------
Q 004456 613 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---------------------F------------------GF------- 646 (752)
Q Consensus 613 G~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~---------------------~------------------~~------- 646 (752)
|.+|+.++.++|++++++|++++........ + ..
T Consensus 156 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (366)
T 2pl5_A 156 GMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMR 235 (366)
T ss_dssp HHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHH
T ss_pred HHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHH
Confidence 9999999999999999999999865321000 0 00
Q ss_pred -------cc-------cccc---------------hh---hhHHHHHhcC------hhhhcCCCCCCEEEEEeCCCCCCC
Q 004456 647 -------QT-------EFRT---------------LW---EATNVYIEMS------PITHANKIKKPILIIHGEVDDKVG 688 (752)
Q Consensus 647 -------~~-------~~~~---------------~~---~~~~~~~~~~------~~~~~~~~~~P~li~~G~~D~~v~ 688 (752)
.. .... .. .....+...+ ....+.++++|+|+++|++|.++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 315 (366)
T 2pl5_A 236 EKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP 315 (366)
T ss_dssp HHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC
T ss_pred HHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC
Confidence 00 0000 00 0001111111 112567889999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEe-CCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 689 LFPMQAERFFDALKGHGALSRLVLL-PFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
+..++++.+.+...+...+++++ +++||... .+.++.+.+.+.+||+++
T Consensus 316 --~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 316 --PAQSREIVKSLEAADKRVFYVELQSGEGHDSF-LLKNPKQIEILKGFLENP 365 (366)
T ss_dssp --HHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG-GSCCHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHhhhcccCeEEEEeCCCCCcchh-hcChhHHHHHHHHHHccC
Confidence 99999999999877667899999 89999876 455678888999999753
No 168
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.68 E-value=1.6e-14 Score=149.67 Aligned_cols=251 Identities=10% Similarity=0.011 Sum_probs=165.7
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|.++++...........+........+....|+|||++|+... ....|.++++++++..........
T Consensus 72 g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~~~- 140 (337)
T 1gxr_A 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----------EASTLSIWDLAAPTPRIKAELTSS- 140 (337)
T ss_dssp SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE----------SSSEEEEEECCCC--EEEEEEECS-
T ss_pred CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc----------CCCcEEEEECCCCCcceeeecccC-
Confidence 457788876622222223332123334688999999999998863 346899999988763322111111
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
...+..+.|+|+++.|+..+.. +.|+++++
T Consensus 141 -~~~i~~~~~~~~~~~l~~~~~d-------------------------------------------------g~v~~~d~ 170 (337)
T 1gxr_A 141 -APACYALAISPDSKVCFSCCSD-------------------------------------------------GNIAVWDL 170 (337)
T ss_dssp -SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEET
T ss_pred -CCceEEEEECCCCCEEEEEeCC-------------------------------------------------CcEEEEeC
Confidence 1135688999999988876321 57888898
Q ss_pred -CCC-ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcc
Q 004456 165 -DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (752)
Q Consensus 165 -~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (752)
+++ ...+..+ ..+..+.|+|||+.|+....+ +.+.+||+.+++.........
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~------------ 225 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFTS------------ 225 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECSS------------
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCCC------------
Confidence 553 3444444 778899999999999987655 379999998776554433221
Q ss_pred ccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeeccc
Q 004456 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (752)
Q Consensus 242 ~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~ 321 (752)
.+..+.|+|||+. |+... ..+.++++++ .+.....+......+..++|+||++.|+...
T Consensus 226 -~v~~~~~s~~~~~-l~~~~------------~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 284 (337)
T 1gxr_A 226 -QIFSLGYCPTGEW-LAVGM------------ESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTG---- 284 (337)
T ss_dssp -CEEEEEECTTSSE-EEEEE------------TTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEE----
T ss_pred -ceEEEEECCCCCE-EEEEc------------CCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEec----
Confidence 2667999999996 55553 3346888888 4455555666677789999999999888776
Q ss_pred CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 322 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
..+.|.++++.++ +......... ....++|+|||++|+...
T Consensus 285 ~dg~i~~~~~~~~--~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 285 KDNLLNAWRTPYG--ASIFQSKESS-------SVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp TTSEEEEEETTTC--CEEEEEECSS-------CEEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCC--eEEEEecCCC-------cEEEEEECCCCCEEEEec
Confidence 3346888888774 2222211111 111267999999988876
No 169
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.68 E-value=2e-16 Score=159.39 Aligned_cols=197 Identities=16% Similarity=0.132 Sum_probs=130.6
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc----h--hHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----R--FVEQLVSSA 586 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~----~--~~~~~~~d~ 586 (752)
.|+||++||.+... ..|. .++..|++ ||.|++ .+.+|+|.+.... . ......+|+
T Consensus 28 ~~~vv~lHG~~~~~-----------~~~~----~~~~~l~~-g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQ-----------NMWR----FMLPELEK-QFTVIV---FDYVGSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCCG-----------GGGT----TTHHHHHT-TSEEEE---CCCTTSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chHH----HHHHHHhc-CceEEE---EecCCCCCCCCCCCCccccccHHHHHHHH
Confidence 38999999964221 1122 34556666 999999 5666777764432 1 344555666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccc---------------c
Q 004456 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF---------------R 651 (752)
Q Consensus 587 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~---------------~ 651 (752)
.++++.+ +.++++|+||||||.+++.++.++|++++++|+++|..........+.... .
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 5555544 236899999999999999999999999999999998653211100000000 0
Q ss_pred chh-------------------hhHH---------------HHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 652 TLW-------------------EATN---------------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 652 ~~~-------------------~~~~---------------~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
..| .... .....+....+.++++|+|+++|++|..+| ...++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 000 0000 001112234557789999999999999998 8887777
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
.+.+ ...+++++++++|... .+.++.+.+.+.+||+++.
T Consensus 241 ~~~~----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENI----PNSQLELIQAEGHCLH-MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHS----SSEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHC-
T ss_pred HHhC----CCCcEEEecCCCCccc-ccCHHHHHHHHHHHHHhcC
Confidence 6655 3469999999999865 4557888999999998864
No 170
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.68 E-value=3.6e-15 Score=156.71 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=154.3
Q ss_pred CceEEEEEEcCC--CcE--EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCcc-------C-----CC
Q 004456 480 LQKEMIKYQRKD--GVP--LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF-------S-----GM 543 (752)
Q Consensus 480 ~~~~~~~~~~~~--g~~--~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~-------~-----~~ 543 (752)
....++.|.+.| |.. ..+.++.|.+.. .+.|+|.+.||..... ..+.|... . ..
T Consensus 73 ~~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~------~~CaPS~~~~~~~~~~~~~~~~~ 142 (462)
T 3guu_A 73 AASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATA------LDCAPSYSYLTGLDQPNKVTAVL 142 (462)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCS------GGGCHHHHHBSCSCCTTGGGGST
T ss_pred ceEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCC------CCcCCccccccCCCccccchhhh
Confidence 467777777664 433 778999998732 2489999999953211 01111100 0 00
Q ss_pred CchhHHHH-HhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEEEeChHHHHHHHHHH
Q 004456 544 TPTSSLIF-LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVA-DPSRIAVGGHSYGAFMTAHLLA 621 (752)
Q Consensus 544 ~~~~~~~l-~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~-d~~~i~l~G~S~GG~~a~~~~~ 621 (752)
...+...+ +++||+|++ .|..|.|..+.........+.|..+++..+. .+ ...+++++|||+||..+++++.
T Consensus 143 e~~~~~~~~l~~G~~Vv~---~Dy~G~G~~y~~~~~~~~~vlD~vrAa~~~~---~~~~~~~v~l~G~S~GG~aal~aa~ 216 (462)
T 3guu_A 143 DTPIIIGWALQQGYYVVS---SDHEGFKAAFIAGYEEGMAILDGIRALKNYQ---NLPSDSKVALEGYSGGAHATVWATS 216 (462)
T ss_dssp HHHHHHHHHHHTTCEEEE---ECTTTTTTCTTCHHHHHHHHHHHHHHHHHHT---TCCTTCEEEEEEETHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCEEEE---ecCCCCCCcccCCcchhHHHHHHHHHHHHhc---cCCCCCCEEEEeeCccHHHHHHHHH
Confidence 11234567 899999999 4455666543332222222334444443332 23 2479999999999999999887
Q ss_pred hC----CC-ceeEEEEccCCCCCCCC-------cc---------C----ccc----------------------c-----
Q 004456 622 HA----PH-LFCCGIARSGSYNKTLT-------PF---------G----FQT----------------------E----- 649 (752)
Q Consensus 622 ~~----p~-~~~~~v~~~~~~~~~~~-------~~---------~----~~~----------------------~----- 649 (752)
.+ |+ .+++++..++..|+... .+ + ++. .
T Consensus 217 ~~~~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~ 296 (462)
T 3guu_A 217 LAESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLP 296 (462)
T ss_dssp HHHHHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHH
T ss_pred hChhhcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchH
Confidence 54 34 58888888877551100 00 0 000 0
Q ss_pred ----------------ccchhhhH---HHHHhcChhh-----hcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCC
Q 004456 650 ----------------FRTLWEAT---NVYIEMSPIT-----HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 705 (752)
Q Consensus 650 ----------------~~~~~~~~---~~~~~~~~~~-----~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~ 705 (752)
...+...+ +.+.+..... -..+.++|+||+||.+|.+|| +.+++++++++++.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G 374 (462)
T 3guu_A 297 QVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKG 374 (462)
T ss_dssp HHHHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTT
T ss_pred HHHHhhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcC
Confidence 00000000 0111111100 012457899999999999999 999999999999999
Q ss_pred CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCCCCCC-CC
Q 004456 706 ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGK-CG 751 (752)
Q Consensus 706 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~-~~ 751 (752)
.+++++.|++++|.... ......+++||+++|.+. .... |.
T Consensus 375 ~~V~~~~y~~~~H~~~~----~~~~~d~l~WL~~r~~G~-~~~~~C~ 416 (462)
T 3guu_A 375 ANINFSPYPIAEHLTAE----IFGLVPSLWFIKQAFDGT-TPKVICG 416 (462)
T ss_dssp CEEEEEEESSCCHHHHH----HHTHHHHHHHHHHHHHTC-CCCCCTT
T ss_pred CCeEEEEECcCCccCch----hhhHHHHHHHHHHHhCCC-CCCCCCC
Confidence 99999999999997542 234678899999999887 5556 86
No 171
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.68 E-value=2e-16 Score=158.94 Aligned_cols=193 Identities=15% Similarity=0.110 Sum_probs=125.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc----hhHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----RFVEQLVSSAEA 588 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~----~~~~~~~~d~~~ 588 (752)
.|+||++||.+... ..|. .+...|++ ||.|++ .+.+|+|.+.... .......+|+.+
T Consensus 23 ~~~vv~~HG~~~~~-----------~~~~----~~~~~L~~-~~~vi~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 83 (278)
T 3oos_A 23 GPPLCVTHLYSEYN-----------DNGN----TFANPFTD-HYSVYL---VNLKGCGNSDSAKNDSEYSMTETIKDLEA 83 (278)
T ss_dssp SSEEEECCSSEECC-----------TTCC----TTTGGGGG-TSEEEE---ECCTTSTTSCCCSSGGGGSHHHHHHHHHH
T ss_pred CCeEEEEcCCCcch-----------HHHH----HHHHHhhc-CceEEE---EcCCCCCCCCCCCCcccCcHHHHHHHHHH
Confidence 47899999964211 1222 23344555 999999 5566777775542 124455555555
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-----cCccccc-------------
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----FGFQTEF------------- 650 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-----~~~~~~~------------- 650 (752)
.++.+ +.++++++|||+||.+++.++.++|++++++|+++|........ .......
T Consensus 84 ~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T 3oos_A 84 IREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALND 157 (278)
T ss_dssp HHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTC
T ss_pred HHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcc
Confidence 55443 33589999999999999999999999999999999875511000 0000000
Q ss_pred -c----------chh-------------------------hhHHHHH-----hcChhhhcCCCCCCEEEEEeCCCCCCCC
Q 004456 651 -R----------TLW-------------------------EATNVYI-----EMSPITHANKIKKPILIIHGEVDDKVGL 689 (752)
Q Consensus 651 -~----------~~~-------------------------~~~~~~~-----~~~~~~~~~~~~~P~li~~G~~D~~v~~ 689 (752)
. ..+ .....+. ..+....+.++++|+|+++|++|..+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~- 236 (278)
T 3oos_A 158 DSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCP- 236 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSC-
T ss_pred cccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCC-
Confidence 0 000 0000011 112234457789999999999999998
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHH
Q 004456 690 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 737 (752)
+..++++.+.+ ..+++++++++||... .+.++.+.+.+.+||
T Consensus 237 -~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 237 -YIFSCEIANLI----PNATLTKFEESNHNPF-VEEIDKFNQFVNDTL 278 (278)
T ss_dssp -HHHHHHHHHHS----TTEEEEEETTCSSCHH-HHSHHHHHHHHHHTC
T ss_pred -HHHHHHHHhhC----CCcEEEEcCCcCCCcc-cccHHHHHHHHHhhC
Confidence 88887777765 3469999999999865 456777777777764
No 172
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.68 E-value=2.1e-14 Score=148.95 Aligned_cols=289 Identities=10% Similarity=0.062 Sum_probs=167.4
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-eeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.+...+|||||+.|+-.+... .+ --...+++++...... ..... ........+..++|+||++ |+..+.
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~--~r--~Wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~d~~-l~~~s~---- 101 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLS--GR--CWAGSLWLFKDPCAAPNEGFCS-AGVQTEAGVADLTWVGERG-ILVASD---- 101 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCS--SS--CCCEEEEEESSGGGTTCGGGCS-EEEEESSCEEEEEEETTTE-EEEEET----
T ss_pred CEEEEEECCCCCEEEEEeCCc--eE--EeeceeeeeccccccCCcceee-eeeccCCCEEEEEEeCCCe-EEEEEC----
Confidence 578899999999998754210 00 1123455554322111 11100 0000112467889999976 444321
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcccc-----CCc-cceeccccC
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-----GTP-AVYTAVEPS 183 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l-----~~~-~~~~~~~~S 183 (752)
.+.|.+||+ +|+.... ..+ ..+..++||
T Consensus 102 ---------------------------------------------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s 136 (344)
T 4gqb_B 102 ---------------------------------------------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVL 136 (344)
T ss_dssp ---------------------------------------------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC
T ss_pred ---------------------------------------------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEEC
Confidence 157888888 5543221 123 678899999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEec
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~ 263 (752)
|||++|+..+.+. .|.+||+.+++........ ...+..+.|+|+++. ++.+..
T Consensus 137 pdg~~l~sgs~d~-------------~i~iwd~~~~~~~~~~~~h------------~~~V~~~~~~~~~~~-~l~s~s- 189 (344)
T 4gqb_B 137 SSGTQAVSGSKDI-------------CIKVWDLAQQVVLSSYRAH------------AAQVTCVAASPHKDS-VFLSCS- 189 (344)
T ss_dssp TTSSEEEEEETTS-------------CEEEEETTTTEEEEEECCC------------SSCEEEEEECSSCTT-EEEEEE-
T ss_pred CCCCEEEEEeCCC-------------eEEEEECCCCcEEEEEcCc------------CCceEEEEecCCCCC-ceeeec-
Confidence 9999998876663 7999999887654432221 123678999999987 544432
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEE-EeeecccCceeEEEEcCCCCCcccee
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALV-NETWYKTSQTRTWLVCPGSKDVAPRV 340 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~-~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (752)
..+.|.+||+. .+.....+. .....+..++|+|++..++ .+. ....|.++|+.++ +...
T Consensus 190 ----------~D~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~----~dg~v~~wd~~~~--~~~~ 251 (344)
T 4gqb_B 190 ----------EDNRILLWDTR--CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD----ENGTVSLVDTKST--SCVL 251 (344)
T ss_dssp ----------TTSCEEEEETT--SSSCEEECC----CCCEEEEEECSSCTTEEEEEE----TTSEEEEEESCC----CCE
T ss_pred ----------ccccccccccc--ccceeeeeecceeeccceeeeecCCCCcceEEec----cCCcEEEEECCCC--cEEE
Confidence 23478888883 222233332 2233467889999765554 444 2345888888774 2222
Q ss_pred ccccccccccCCCCCCceeeCCCCCe-EEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhh
Q 004456 341 LFDRVFENVYSDPGSPMMTRTSTGTN-VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 419 (752)
Q Consensus 341 l~~~~~~~~~~~~~~p~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 419 (752)
........ .-.++|||||.. |+..+.+ | .|.+||+.+++..++..-..
T Consensus 252 ~~~~h~~~------v~~v~fsp~g~~~lasgs~D-------------~--------~i~vwd~~~~~~~~~~~H~~---- 300 (344)
T 4gqb_B 252 SSAVHSQC------VTGLVFSPHSVPFLASLSED-------------C--------SLAVLDSSLSELFRSQAHRD---- 300 (344)
T ss_dssp EEECCSSC------EEEEEECSSSSCCEEEEETT-------------S--------CEEEECTTCCEEEEECCCSS----
T ss_pred EEcCCCCC------EEEEEEccCCCeEEEEEeCC-------------C--------eEEEEECCCCcEEEEcCCCC----
Confidence 22211111 112679999964 5544422 1 48999998887655422111
Q ss_pred hceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 004456 420 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (752)
Q Consensus 420 ~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g 462 (752)
.+.. ++||||++.++.+.... ..|..+++++.
T Consensus 301 -~V~~-------v~~sp~~~~llas~s~D---~~v~~w~v~~~ 332 (344)
T 4gqb_B 301 -FVRD-------ATWSPLNHSLLTTVGWD---HQVVHHVVPTE 332 (344)
T ss_dssp -CEEE-------EEECSSSTTEEEEEETT---SCEEEEECCC-
T ss_pred -CEEE-------EEEeCCCCeEEEEEcCC---CeEEEEECCCC
Confidence 1333 58999999887776543 34777876653
No 173
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.68 E-value=1.9e-15 Score=151.19 Aligned_cols=211 Identities=18% Similarity=0.175 Sum_probs=138.3
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|.++++..+-|.+ .+.|.||++||.+... ..| ..++..|+ .+|.|++ .+.+|+
T Consensus 9 ~~g~~l~y~~~g~~~------~~~~~vvllHG~~~~~-----------~~~----~~~~~~L~-~~~~vi~---~D~~G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH------GNAPWIVLSNSLGTDL-----------SMW----APQVAALS-KHFRVLR---YDTRGH 63 (266)
T ss_dssp CSSSEEEEEEESCSS------SCCCEEEEECCTTCCG-----------GGG----GGGHHHHH-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcCCcc------CCCCeEEEecCccCCH-----------HHH----HHHHHHHh-cCeEEEE---ecCCCC
Confidence 477788877764421 0248899999953211 112 23455565 4699999 666788
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-cC-
Q 004456 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG- 645 (752)
Q Consensus 570 g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-~~- 645 (752)
|.+... ........+|+.+.++.+. .+++.|+||||||.+|+.+|.++|++++++|++++........ +.
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 137 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTLK------IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVP 137 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcC------CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHH
Confidence 877543 2345666777777776652 3589999999999999999999999999999998754321000 00
Q ss_pred ---------ccc---cccchh-----h--hH---------------H-------HHHhcChhhhcCCCCCCEEEEEeCCC
Q 004456 646 ---------FQT---EFRTLW-----E--AT---------------N-------VYIEMSPITHANKIKKPILIIHGEVD 684 (752)
Q Consensus 646 ---------~~~---~~~~~~-----~--~~---------------~-------~~~~~~~~~~~~~~~~P~li~~G~~D 684 (752)
... .....| . .+ . .+...+....+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 217 (266)
T 2xua_A 138 RAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHD 217 (266)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCC
Confidence 000 000000 0 00 0 00111223345678999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 685 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 685 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
..+| +..++++.+.+.. .++++++ +||... .+.++.+.+.+.+||.+
T Consensus 218 ~~~~--~~~~~~~~~~~~~----~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 218 LAAT--PAQGRELAQAIAG----ARYVELD-ASHISN-IERADAFTKTVVDFLTE 264 (266)
T ss_dssp SSSC--HHHHHHHHHHSTT----CEEEEES-CCSSHH-HHTHHHHHHHHHHHHTC
T ss_pred CcCC--HHHHHHHHHhCCC----CEEEEec-CCCCch-hcCHHHHHHHHHHHHHh
Confidence 9998 8888777666543 4899999 999865 45577888899999853
No 174
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.68 E-value=3.8e-16 Score=156.11 Aligned_cols=197 Identities=18% Similarity=0.136 Sum_probs=128.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCC----Cc--hhHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP----ND--RFVEQLVSSA 586 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~----~~--~~~~~~~~d~ 586 (752)
.|+||++||.+... ..|. .++..|++ ||.|++ .+.+|+|.+.. .. .......+|+
T Consensus 20 ~p~vv~~HG~~~~~-----------~~~~----~~~~~l~~-g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQ-----------SAWN----RILPFFLR-DYRVVL---YDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCCG-----------GGGT----TTGGGGTT-TCEEEE---ECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCcH-----------HHHH----HHHHHHhC-CcEEEE---EcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 58999999964221 1222 23344555 999999 55667777633 11 1345666666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc---Cccccc-----------cc
Q 004456 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF---GFQTEF-----------RT 652 (752)
Q Consensus 587 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~-----------~~ 652 (752)
.++++.+ +.++++|+||||||++++.++.++|++++++|++++......... .+.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666554 236899999999999999999999999999999998643211100 000000 00
Q ss_pred hh-----------------h----------------hHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHH
Q 004456 653 LW-----------------E----------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 699 (752)
Q Consensus 653 ~~-----------------~----------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 699 (752)
.| . ....+...+....+.++++|+|+++|++|..+| ...++++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 0 000011123334566789999999999999998 888877776
Q ss_pred HHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 700 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 700 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
.+.. .++++++++++|... .+.++.+.+.+.+||+++
T Consensus 233 ~~~~---~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 233 HLGG---KNTVHWLNIEGHLPH-LSAPTLLAQELRRALSHR 269 (269)
T ss_dssp HSSS---CEEEEEEEEESSCHH-HHCHHHHHHHHHHHHC--
T ss_pred hCCC---CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHhhC
Confidence 6533 279999999999865 456778888899998753
No 175
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.68 E-value=8.4e-14 Score=147.34 Aligned_cols=299 Identities=9% Similarity=0.048 Sum_probs=183.9
Q ss_pred eeceeEecCCC-CeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEec-CCcEEEEEecCCC
Q 004456 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG-~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~ 109 (752)
.+...+|+||| ++||..+ ....|.++++.+++.......... ...+..+.|+| +++.|+..+.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~--- 139 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGS----------KGGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSI--- 139 (383)
T ss_dssp CEEEEEECSSCTTEEEEEE----------BTSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEET---
T ss_pred CEEEEEECCCCCCEEEEEc----------CCCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeC---
Confidence 58899999999 7777753 346889999998876655432111 11467899999 5676665532
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCc----cceeccccCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPSP 184 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~----~~~~~~~~Sp 184 (752)
.+.|.++++.+ ....+... ..+..++|+|
T Consensus 140 ----------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 140 ----------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ----------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ----------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 15788888855 33333222 5588999999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEecc
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~ 264 (752)
||+.|+....+. .+.+||+.++....+..... .+..++|+|+|+. ++++..
T Consensus 174 ~~~~l~~~~~d~-------------~i~i~d~~~~~~~~~~~h~~-------------~v~~~~~~~~~~~-~l~s~~-- 224 (383)
T 3ei3_B 174 SRQMLATGDSTG-------------RLLLLGLDGHEIFKEKLHKA-------------KVTHAEFNPRCDW-LMATSS-- 224 (383)
T ss_dssp TTTEEEEEETTS-------------EEEEEETTSCEEEEEECSSS-------------CEEEEEECSSCTT-EEEEEE--
T ss_pred CCCEEEEECCCC-------------CEEEEECCCCEEEEeccCCC-------------cEEEEEECCCCCC-EEEEEe--
Confidence 999998876553 89999998776666654332 2778999999996 444432
Q ss_pred CCCCccccCccceEEeccCCCCCC-CCCeEEeecccceeeeeeec-CCceEEEeeecccCceeEEEEcCCCCCccceecc
Q 004456 265 RGDANVEVSPRDIIYTQPAEPAEG-EKPEILHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (752)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 342 (752)
..+.|.+||+...+. ............+..++|+| ||+.|+... ....|.++++.++. ....+.
T Consensus 225 ---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~----~d~~i~iwd~~~~~-~~~~~~ 290 (383)
T 3ei3_B 225 ---------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD----QRNEIRVYSSYDWS-KPDQII 290 (383)
T ss_dssp ---------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE----SSSEEEEEETTBTT-SCSEEE
T ss_pred ---------CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc----CCCcEEEEECCCCc-cccccc
Confidence 334788888731110 22233335667789999999 999998876 33468888887752 222222
Q ss_pred ccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhce
Q 004456 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (752)
Q Consensus 343 ~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (752)
..... ...........|+|++..+++..... +.+ . ......|.+||+.+++..........
T Consensus 291 ~~~~~-~~~~~~~~~~~~~p~~~~~~~~~s~d---g~~-s--------~s~d~~i~iwd~~~~~~~~~l~~~~~------ 351 (383)
T 3ei3_B 291 IHPHR-QFQHLTPIKATWHPMYDLIVAGRYPD---DQL-L--------LNDKRTIDIYDANSGGLVHQLRDPNA------ 351 (383)
T ss_dssp ECCBC-CCTTSCCCCCEECSSSSEEEEECBCC---TTT-C--------TTCCCCEEEEETTTCCEEEEECBTTB------
T ss_pred ccccc-ccccccceEEeccCCCCceEEEecCC---ccc-c--------cCCCCeEEEEecCCCceeeeecCCCC------
Confidence 11110 00001111235888888776554221 111 0 11233599999998876444332110
Q ss_pred eeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
......++|+||++.|+.. + ...|.+||+++
T Consensus 352 ---~~~~~~~~~s~~g~~l~s~-s----d~~i~iw~~~~ 382 (383)
T 3ei3_B 352 ---AGIISLNKFSPTGDVLASG-M----GFNILIWNRED 382 (383)
T ss_dssp ---CSCCCEEEECTTSSEEEEE-E----TTEEEEEECC-
T ss_pred ---CceEEEEEEecCccEEEEe-c----CCcEEEEecCC
Confidence 0111224899999988665 2 24688888653
No 176
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.68 E-value=6.5e-16 Score=158.13 Aligned_cols=217 Identities=13% Similarity=0.051 Sum_probs=136.1
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
.+...+.. ++..+.++.+-++ ..|+||++||++... ..|. .++..|++ ||.|+++
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g~~--------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~-g~~vi~~ 99 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASGPE--------DAPPLVLLHGALFSS-----------TMWY----PNIADWSS-KYRTYAV 99 (306)
T ss_dssp CEEEEECC-TTEEEEEEEESCT--------TSCEEEEECCTTTCG-----------GGGT----TTHHHHHH-HSEEEEE
T ss_pred cceEEEec-CCceEEEEeeCCC--------CCCeEEEECCCCCCH-----------HHHH----HHHHHHhc-CCEEEEe
Confidence 34444544 4456766664332 258999999974211 1122 34556666 9999994
Q ss_pred CCCCCCCC-CCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004456 562 PSIPIIGE-GDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (752)
Q Consensus 562 ~~~~~~g~-g~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~ 638 (752)
+.+|+ |.+.. .........+|+.++++.+ +.++++|+||||||.+++.++.++|++++++|+++|...
T Consensus 100 ---D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (306)
T 2r11_A 100 ---DIIGDKNKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAET 170 (306)
T ss_dssp ---CCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSB
T ss_pred ---cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccc
Confidence 44566 44422 2233455566666666554 236899999999999999999999999999999998765
Q ss_pred CCCCccCcc-----c-----------------cccchhh-hHH-HHHh-----------------cChhhhcCCCCCCEE
Q 004456 639 KTLTPFGFQ-----T-----------------EFRTLWE-ATN-VYIE-----------------MSPITHANKIKKPIL 677 (752)
Q Consensus 639 ~~~~~~~~~-----~-----------------~~~~~~~-~~~-~~~~-----------------~~~~~~~~~~~~P~l 677 (752)
......... . .....+. ... .... ......+.++++|+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 250 (306)
T 2r11_A 171 FLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPIL 250 (306)
T ss_dssp TSCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEE
T ss_pred cCcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEE
Confidence 321110000 0 0000000 000 0000 011223456789999
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 678 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 678 i~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+++|++|..+| +..+.++.+.+ ...+++++++++||... .+.+..+.+.+.+||+
T Consensus 251 ii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 251 LLLGEHEVIYD--PHSALHRASSF---VPDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EEEETTCCSSC--HHHHHHHHHHH---STTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EEEeCCCcccC--HHHHHHHHHHH---CCCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 99999999998 88776555543 23468999999999765 4557788888999885
No 177
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.68 E-value=2.9e-16 Score=154.52 Aligned_cols=195 Identities=12% Similarity=0.097 Sum_probs=127.0
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~~~ 591 (752)
.|+||++||.+... ..|. ....|+ +||.|++ .+.+|+|.+.... .......+|+.++++
T Consensus 16 ~~~vv~~hG~~~~~-----------~~~~-----~~~~l~-~g~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCNL-----------KIFG-----ELEKYL-EDYNCIL---LDLKGHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCCG-----------GGGT-----TGGGGC-TTSEEEE---ECCTTSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccH-----------HHHH-----HHHHHH-hCCEEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 68999999964321 1122 122233 8999999 4556776664332 235566677777664
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCCccCc-c---c-------------cc---
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLTPFGF-Q---T-------------EF--- 650 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~p~~~~~~v~~~~~~~~~~~~~~~-~---~-------------~~--- 650 (752)
+...+..+. +++|+|||+||.+++.++.+ +|+ ++++|+++|........... . . ..
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 443333333 89999999999999999999 999 99999999876531110000 0 0 00
Q ss_pred -------------cchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004456 651 -------------RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 717 (752)
Q Consensus 651 -------------~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 717 (752)
.............+....+.++++|+|+++|++|..+| ...++.+.+.+. .++++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 00001111122334445567889999999999999998 888877776653 47999999999
Q ss_pred ccCCccccHHHHHHHHHHHH
Q 004456 718 HVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 718 H~~~~~~~~~~~~~~~~~fl 737 (752)
|.+. .+.++.+.+.+.+||
T Consensus 227 H~~~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLL-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHH-HHTHHHHHHHHHTTC
T ss_pred cceE-EecHHHHHHHHHhhC
Confidence 9865 345666666676664
No 178
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.67 E-value=1.1e-14 Score=146.27 Aligned_cols=239 Identities=9% Similarity=0.040 Sum_probs=169.2
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccc----cCcceEEEEEcccCcceeccCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVS----SCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~----~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
..|+.++.++ ...++|+. ...--++|+|++|+|+...++..... .....||.++++|++.++|+..
T Consensus 37 ~~ly~~~~dg----~~~~~l~~------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~ 106 (302)
T 3s25_A 37 GRLYAMNIDG----SNIHKLSN------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD 106 (302)
T ss_dssp TEEEEEETTS----CSCEEEEE------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS
T ss_pred ceEEEEcCCC----CCCEEccC------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC
Confidence 4588888887 78888872 22345799999999986532111000 1257899999999998888644
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
. ...|+++|++|+|+..... ....||
T Consensus 107 ~---------~~~~s~~g~~Iy~~~~~~~---------------------------------------------~~~~Iy 132 (302)
T 3s25_A 107 P---------CIYASLIGNYIYYLHYDTQ---------------------------------------------TATSLY 132 (302)
T ss_dssp C---------EEEEEEETTEEEEEEESSS---------------------------------------------SCEEEE
T ss_pred C---------ccEEEEeCCEEEEEeecCC---------------------------------------------CCceEE
Confidence 3 2379999999999841111 126899
Q ss_pred EEccCC-CccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 161 LGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 161 ~~~~~G-~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
+++++| +.++|+.... ..++|+|+.|+|+.... ..|++.+++++..++|.....
T Consensus 133 ~~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g~------------~~Iy~~~l~g~~~~~l~~~~~---------- 187 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPKN------------GQLYRYDTASQSEALFYDCNC---------- 187 (302)
T ss_dssp EEETTSCCCEEEESSCC---CCSEEETTEEEEECTTT------------CCEEEEETTTTEEEEEECSCE----------
T ss_pred EEECCCCCeEEEeCCCc---eEeeEECCEEEEEeCCC------------ceEEEEECCCCCEEEEeCCCc----------
Confidence 999988 7777776532 56899999999997633 489999999998888754311
Q ss_pred ccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeec
Q 004456 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~ 319 (752)
...++|+|++ |||+... ....|++.++ +|+..+.|+.... +.|+|+|++|+|....
T Consensus 188 ------~~~~~P~g~~-iy~t~~~----------~~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 188 ------YKPVVLDDTN-VYYMDVN----------RDNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGG 243 (302)
T ss_dssp ------EEEEEEETTE-EEEEEGG----------GTTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECS
T ss_pred ------cceeeecCCE-EEEEEcC----------CCcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECC
Confidence 1235699998 9998632 1237999998 7778888875432 5689999999887533
Q ss_pred ccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 320 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 320 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
. ...|+++++++. ..+++..... ...++.+.+|+|+.
T Consensus 244 ~--~~~i~~~~~DG~--~r~~l~~~~~-----------~~i~i~~d~Iy~td 280 (302)
T 3s25_A 244 D--NPALCVVKNDGT--GFKELAKGEF-----------CNINVTSQYVYFTD 280 (302)
T ss_dssp S--SCEEEEEETTSC--CCEEEEESCE-----------EEEEECSSEEEEEE
T ss_pred C--CcEEEEEECCCC--ccEEeeCCcc-----------ceEEEeCCEEEEEE
Confidence 2 268999999984 4566654322 23577888999986
No 179
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.67 E-value=3.7e-16 Score=156.55 Aligned_cols=200 Identities=14% Similarity=0.159 Sum_probs=131.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCCCCCCCCc-hhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~~ 590 (752)
.|.||++||.+... ..| ......|++ +||.|++ .+.+|+|.+.... .......+|+.+.+
T Consensus 21 ~~~vv~lhG~~~~~-----------~~~----~~~~~~l~~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~l 82 (272)
T 3fsg_A 21 GTPIIFLHGLSLDK-----------QST----CLFFEPLSNVGQYQRIY---LDLPGMGNSDPISPSTSDNVLETLIEAI 82 (272)
T ss_dssp SSEEEEECCTTCCH-----------HHH----HHHHTTSTTSTTSEEEE---ECCTTSTTCCCCSSCSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcH-----------HHH----HHHHHHHhccCceEEEE---ecCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 47899999964211 111 122334555 6999999 5566777665443 34566677777777
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----------cc----ccc-----
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-----------FQ----TEF----- 650 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~-----------~~----~~~----- 650 (752)
+.+. +.++++|+||||||.+|+.++.++|++++++|+++|.......... +. ...
T Consensus 83 ~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
T 3fsg_A 83 EEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFL 157 (272)
T ss_dssp HHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHH
T ss_pred HHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHH
Confidence 6642 2368999999999999999999999999999999987532110000 00 000
Q ss_pred -------cchhhhHH-----HH--------Hhc--------ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHH
Q 004456 651 -------RTLWEATN-----VY--------IEM--------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 702 (752)
Q Consensus 651 -------~~~~~~~~-----~~--------~~~--------~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 702 (752)
...+.... .+ ... .+...+.++++|+|+++|++|..+| +..++++.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~- 234 (272)
T 3fsg_A 158 SMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVG--YQEQLKLINHN- 234 (272)
T ss_dssp HHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTC--SHHHHHHHTTC-
T ss_pred HHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCC--HHHHHHHHHhc-
Confidence 00000000 00 000 0011346788999999999999998 77776665543
Q ss_pred hCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 703 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 703 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
..+++++++++||... .+.++.+.+.+.+||++...
T Consensus 235 ---~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 235 ---ENGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp ---TTEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHHHC
T ss_pred ---CCCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHhhc
Confidence 4579999999999865 45678889999999998754
No 180
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.67 E-value=1.5e-15 Score=169.50 Aligned_cols=224 Identities=13% Similarity=0.057 Sum_probs=147.7
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEe
Q 004456 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (752)
Q Consensus 481 ~~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (752)
..+...+...+|.++.....- +.|+||++||.+... ..| ..++..|+++||.|++
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPESW-----------YSW----RYQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCCG-----------GGG----TTHHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCch-----------hHH----HHHHHHHHhCCCEEEE
Confidence 345555555688888766542 258999999964211 112 2457788999999999
Q ss_pred cCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 561 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 561 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+.+|+|.+.... .......+|+.++++.+ +.++++|+||||||.+++.++.++|++++++|++++.
T Consensus 291 ---~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 291 ---MDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ---ECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ---ecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 5556777765432 22455667777777665 2368999999999999999999999999999998875
Q ss_pred CCCCCCccCcc-------------------------------------------------------------c----ccc
Q 004456 637 YNKTLTPFGFQ-------------------------------------------------------------T----EFR 651 (752)
Q Consensus 637 ~~~~~~~~~~~-------------------------------------------------------------~----~~~ 651 (752)
........... . ...
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (555)
T 3i28_A 362 FIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 441 (555)
T ss_dssp CCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTT
T ss_pred CCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccc
Confidence 43111000000 0 000
Q ss_pred chhhhHHHH----------------------HhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 004456 652 TLWEATNVY----------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 709 (752)
Q Consensus 652 ~~~~~~~~~----------------------~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~ 709 (752)
........+ ...+....+.++++|+|+++|++|..+| +..++.+.+.+ ..++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~----~~~~ 515 (555)
T 3i28_A 442 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWI----PHLK 515 (555)
T ss_dssp CCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTC----TTCE
T ss_pred cCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhC----CCce
Confidence 000000000 0001122345788999999999999998 77776665544 3468
Q ss_pred EEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 710 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 710 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+++++++||... .+.++.+.+.+.+||+++....+
T Consensus 516 ~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 550 (555)
T 3i28_A 516 RGHIEDCGHWTQ-MDKPTEVNQILIKWLDSDARNPP 550 (555)
T ss_dssp EEEETTCCSCHH-HHSHHHHHHHHHHHHHHHTCC--
T ss_pred EEEeCCCCCCcc-hhCHHHHHHHHHHHHHhccCCCC
Confidence 999999999765 46678899999999999986543
No 181
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.67 E-value=9.3e-16 Score=154.60 Aligned_cols=194 Identities=15% Similarity=0.104 Sum_probs=127.0
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHH
Q 004456 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVE 591 (752)
Q Consensus 514 P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~~~ 591 (752)
|.||++||.+... .. +......|+++||.|++ .+.+|+|.+.... .......+|+.++++
T Consensus 24 ~pvvllHG~~~~~-----------~~----~~~~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 24 QPVVLIHGYPLDG-----------HS----WERQTRELLAQGYRVIT---YDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp EEEEEECCTTCCG-----------GG----GHHHHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCchh-----------hH----HhhhHHHHHhCCcEEEE---eCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4599999963210 11 22456678899999999 5667777775432 245566788888777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCC----ccCccccc------------cchh
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT----PFGFQTEF------------RTLW 654 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-~~~~~v~~~~~~~~~~~----~~~~~~~~------------~~~~ 654 (752)
.+ +.+++.|+||||||.+++.++.++|+ +++++|++++....... ..+..... ...+
T Consensus 86 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T 1hkh_A 86 TL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred hc------CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhH
Confidence 76 23589999999999999999999998 99999999874321100 00000000 0000
Q ss_pred --------h---------hH---HHHH------------------hcChhhhcCCC---CCCEEEEEeCCCCCCCCCHHH
Q 004456 655 --------E---------AT---NVYI------------------EMSPITHANKI---KKPILIIHGEVDDKVGLFPMQ 693 (752)
Q Consensus 655 --------~---------~~---~~~~------------------~~~~~~~~~~~---~~P~li~~G~~D~~v~~~~~~ 693 (752)
. .. ..+. ..+....+.++ ++|+|+++|++|..+| +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~--~~~ 237 (279)
T 1hkh_A 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--IDA 237 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TTT
T ss_pred HHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCC--hHH
Confidence 0 00 0000 00111124456 8999999999999998 666
Q ss_pred H-HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 694 A-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 694 ~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+ +.+.+.+ ...+++++++++|... .+.++.+.+.+.+||.
T Consensus 238 ~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 238 TARRFHQAV----PEADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp THHHHHHHC----TTSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhC----CCeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 5 5555544 3458999999999865 4567888889999985
No 182
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.67 E-value=9.1e-15 Score=152.51 Aligned_cols=298 Identities=11% Similarity=0.012 Sum_probs=163.0
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
.-.+|.+|.++|+.++++..... .....++|||||+ |+++....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~~-------------------------------- 60 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKED-------------------------------- 60 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEET--------------------------------
T ss_pred CEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEecC--------------------------------
Confidence 35567777777876665322211 1345789999999 77653210
Q ss_pred ccCChhhhhhhhhhcccEEEEEcc-CCCccccCC---c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEe
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~---~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (752)
....|+++++ +|+.+.+.. . .....++|||||++|++..... ..+.+|+
T Consensus 61 --------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------------~~v~v~~ 114 (347)
T 3hfq_A 61 --------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------------GTAEVMK 114 (347)
T ss_dssp --------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------------TEEEEEE
T ss_pred --------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------------CEEEEEE
Confidence 1157899998 566555543 2 5667899999999999886443 3688888
Q ss_pred cC-CceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE
Q 004456 216 TD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (752)
Q Consensus 216 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (752)
++ .+..+.+.........|. .......+..++|+|||+ ++++.. ..+.++++++. .++....+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~--l~v~~~-----------~~~~v~~~~~~--~~g~~~~~ 178 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR--LAVIDL-----------GSDKVYVYNVS--DAGQLSEQ 178 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC--EEEEET-----------TTTEEEEEEEC--TTSCEEEE
T ss_pred eCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc--EEEEeC-----------CCCEEEEEEEC--CCCcEEEe
Confidence 74 333333322211111111 000112245689999999 555531 23467788773 13443332
Q ss_pred ee----cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccc-cC-CCCCCceeeCCCCCeEE
Q 004456 295 HK----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV-YS-DPGSPMMTRTSTGTNVI 368 (752)
Q Consensus 295 ~~----~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~p~~~~s~dg~~l~ 368 (752)
.. .......++|||||+.+++..... ....+|.++..++ +...+........ .. ....-.++|||||++|+
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELS-SQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEE
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCC-CEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEE
Confidence 21 122456789999999887765222 3334555554332 2222211110000 00 00011267999999987
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCCeeEEEecC-CCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEec
Q 004456 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (752)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~ 447 (752)
+.... ...|.+|++. +|+.+.+...... ......++|||||++|++....
T Consensus 256 v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 256 VSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEETT
T ss_pred EEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEEcC
Confidence 77522 1247788875 3444443221110 0112246899999988776543
Q ss_pred CCCCcEEEEEECCCCCeeEeec
Q 004456 448 KTEITQYHILSWPLKKSSQITN 469 (752)
Q Consensus 448 ~~~~~~i~~~d~~~g~~~~lt~ 469 (752)
.. .-.+|.+|..+|+.+.+..
T Consensus 307 ~~-~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 307 TD-NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TT-EEEEEEECTTTCCEEEEEE
T ss_pred CC-cEEEEEEeCCCCeEEeccc
Confidence 22 3346666888888876653
No 183
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.67 E-value=7e-16 Score=156.63 Aligned_cols=197 Identities=18% Similarity=0.189 Sum_probs=132.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~~~ 591 (752)
.|.||++||.+... ..|. ......|+++||.|+++ +.+|+|.+.... .......+|+.++++
T Consensus 43 ~~~vv~lHG~~~~~-----------~~~~---~~~~~~l~~~g~~vi~~---D~~G~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGAG-----------RTWH---PHQVPAFLAAGYRCITF---DNRGIGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCCG-----------GGGT---TTTHHHHHHTTEEEEEE---CCTTSGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCch-----------hhcc---hhhhhhHhhcCCeEEEE---ccCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 58899999964221 1121 13466788999999994 455666554332 245666777777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc--------------Cccccc-------
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--------------GFQTEF------- 650 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~--------------~~~~~~------- 650 (752)
.+ +.++++|+|||+||.+++.++.++|++++++|+++|......... ......
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 66 236899999999999999999999999999999998654211000 000000
Q ss_pred ----cchhhh---HHHH----H------------------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHH
Q 004456 651 ----RTLWEA---TNVY----I------------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 701 (752)
Q Consensus 651 ----~~~~~~---~~~~----~------------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 701 (752)
...... ...+ . ..+....+.++++|+|+++|++|..+| +..++.+.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 000000 0000 0 011223456788999999999999998 88877777665
Q ss_pred HhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 702 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 702 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
..+++++++++||... .+.++.+.+.+.+||++
T Consensus 258 ----~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 ----PNGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp ----TTEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred ----CCceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 3468999999999865 55677888889999875
No 184
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.66 E-value=1.7e-14 Score=148.49 Aligned_cols=224 Identities=14% Similarity=0.117 Sum_probs=150.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.+....|+|+++.+|..+ ....|.++++++++... +..... .+..+.|+|||+.|+..+.
T Consensus 82 ~v~~~~~~~~~~~l~s~s----------~D~~i~lWd~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~g~~---- 142 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSS----------LDAHIRLWDLENGKQIKSIDAGPV-----DAWTLAFSPDSQYLATGTH---- 142 (321)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCTT-----CCCCEEECTTSSEEEEECT----
T ss_pred CEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCCEEEEEeCCCc-----cEEEEEECCCCCEEEEEcC----
Confidence 588899999999888753 34789999998877543 322222 3457899999999987632
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk 187 (752)
.+.|.++++ +++ ...+... ..+..++|||||+
T Consensus 143 ---------------------------------------------dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 143 ---------------------------------------------VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp ---------------------------------------------TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS
T ss_pred ---------------------------------------------CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC
Confidence 157888888 553 3333333 6678999999999
Q ss_pred eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
+|+..+.+. .|.+||+.+++........ ...+..++|+|||+. |+..+
T Consensus 178 ~lasg~~dg-------------~i~iwd~~~~~~~~~~~~h------------~~~v~~l~~spd~~~-l~s~s------ 225 (321)
T 3ow8_A 178 YLASGAIDG-------------IINIFDIATGKLLHTLEGH------------AMPIRSLTFSPDSQL-LVTAS------ 225 (321)
T ss_dssp EEEEEETTS-------------CEEEEETTTTEEEEEECCC------------SSCCCEEEECTTSCE-EEEEC------
T ss_pred EEEEEcCCC-------------eEEEEECCCCcEEEEEccc------------CCceeEEEEcCCCCE-EEEEc------
Confidence 999876663 7999999877654322211 122678999999996 54442
Q ss_pred CccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccc
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 347 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 347 (752)
..+.|.+||+. .+.....+......+..++|+|||+.|+.++ ....|.++++.++ +..........
T Consensus 226 ------~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s----~D~~v~iwd~~~~--~~~~~~~~h~~ 291 (321)
T 3ow8_A 226 ------DDGYIKIYDVQ--HANLAGTLSGHASWVLNVAFCPDDTHFVSSS----SDKSVKVWDVGTR--TCVHTFFDHQD 291 (321)
T ss_dssp ------TTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTT--EEEEEECCCSS
T ss_pred ------CCCeEEEEECC--CcceeEEEcCCCCceEEEEECCCCCEEEEEe----CCCcEEEEeCCCC--EEEEEEcCCCC
Confidence 33468888883 2222334455566788999999999988876 2335888888764 22222111111
Q ss_pred cccCCCCCCceeeCCCCCeEEEee
Q 004456 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 348 ~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
. .-.++|+|||++|+...
T Consensus 292 ~------v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 292 Q------VWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp C------EEEEEECTTSSEEEEEE
T ss_pred c------EEEEEECCCCCEEEEEe
Confidence 1 11267999999988776
No 185
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.66 E-value=1.4e-15 Score=156.12 Aligned_cols=208 Identities=14% Similarity=0.100 Sum_probs=135.8
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+.....-+ .|+||++||.+... .. +..++..|++ ||.|++ .+.+|+
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~~-----------~~----~~~~~~~L~~-~~~v~~---~D~~G~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSNS-----------AV----FEPLMIRLSD-RFTTIA---VDQRGH 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCCG-----------GG----GHHHHHTTTT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCCH-----------HH----HHHHHHHHHc-CCeEEE---EeCCCc
Confidence 3666777665422 48999999964211 11 1234445555 799999 455677
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-----
Q 004456 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----- 642 (752)
Q Consensus 570 g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~----- 642 (752)
|.+... ........+|+.++++++. .++++|+|||+||.+++.++.++|++++++|++++.......
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTLA------RGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHHT------SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhC------CCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 666422 2345566777777776662 268999999999999999999999999999999875431100
Q ss_pred -------ccCcccc--c---------cchhhhHHHHH---------------------------hcChhhhcCCCCCCEE
Q 004456 643 -------PFGFQTE--F---------RTLWEATNVYI---------------------------EMSPITHANKIKKPIL 677 (752)
Q Consensus 643 -------~~~~~~~--~---------~~~~~~~~~~~---------------------------~~~~~~~~~~~~~P~l 677 (752)
...+... . .........+. ..+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 0000000 0 00000000000 0033344567899999
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 678 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 678 i~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+++|++|.++| +..++++.+.+. .+++++++++||.+. .+.+..+.+.+.+||++
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRP----DLPVVVVPGADHYVN-EVSPEITLKAITNFIDA 314 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCT----TSCEEEETTCCSCHH-HHCHHHHHHHHHHHHHC
T ss_pred EEecCCCccCC--HHHHHHHHHhCC----CceEEEcCCCCCcch-hhCHHHHHHHHHHHHhC
Confidence 99999999998 888888877663 357899999999864 55577888899999863
No 186
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=2.9e-14 Score=148.06 Aligned_cols=284 Identities=12% Similarity=0.058 Sum_probs=163.1
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcc--cCcceeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~--~g~~~~lt~~~~ 82 (752)
..|.+++++. .|+.+.+...+........+|||||++|+++.. ....|.+++++ +++.+.+.....
T Consensus 15 ~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR---------PEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp TEEEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEET---------TTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred CeEEEEEECC---CCcEEEeeeEecCCCCceEEECCCCCEEEEeec---------CCCeEEEEEecCCCCceeecccccc
Confidence 4677888753 154444433334446788999999999988643 12566666665 777655532221
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
.. .+..+.|+|||+.|+++... .+.|+++
T Consensus 83 ~~---~~~~~~~s~dg~~l~~~~~~------------------------------------------------~~~i~~~ 111 (343)
T 1ri6_A 83 PG---SLTHISTDHQGQFVFVGSYN------------------------------------------------AGNVSVT 111 (343)
T ss_dssp SS---CCSEEEECTTSSEEEEEETT------------------------------------------------TTEEEEE
T ss_pred CC---CCcEEEEcCCCCEEEEEecC------------------------------------------------CCeEEEE
Confidence 11 35678999999998876321 1456777
Q ss_pred cc-CCC---cccc-CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC-ceeEEec--CCCCCCCCC
Q 004456 163 SL-DGT---AKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELC--DLPPAEDIP 234 (752)
Q Consensus 163 ~~-~G~---~~~l-~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~--~~~~~~~~~ 234 (752)
++ +|. .... .....+..++|||||++|++..... ..+.+|++.+ +....+. ......
T Consensus 112 d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~--- 176 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------------DRICLFTVSDDGHLVAQDPAEVTTVE--- 176 (343)
T ss_dssp EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------------TEEEEEEECTTSCEEEEEEEEEECST---
T ss_pred ECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC------------CEEEEEEecCCCceeeecccccccCC---
Confidence 76 442 2222 2225677899999999998876332 3789999876 5443222 111000
Q ss_pred cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee---cc------cceeeee
Q 004456 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LD------LRFRSVS 305 (752)
Q Consensus 235 ~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~~------~~~~~~~ 305 (752)
...++.++|+|||++ |+++.. ..+.+.++++.. .++....+.. .. .....++
T Consensus 177 ------~~~~~~~~~~pdg~~-l~~~~~-----------~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 177 ------GAGPRHMVFHPNEQY-AYCVNE-----------LNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ------TCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ------CCCcceEEECCCCCE-EEEEeC-----------CCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceE
Confidence 012567999999997 666642 233677777631 1233322211 11 1234689
Q ss_pred eecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEcc
Q 004456 306 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 385 (752)
Q Consensus 306 ~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 385 (752)
|+|||+.|+++...+ ..|.++++....+..+.+....... ..-.++|+|||++|++....
T Consensus 238 ~s~dg~~l~v~~~~~---~~i~v~d~~~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~------------ 297 (343)
T 1ri6_A 238 ITPDGRHLYACDRTA---SLITVFSVSEDGSVLSKEGFQPTET-----QPRGFNVDHSGKYLIAAGQK------------ 297 (343)
T ss_dssp ECTTSSEEEEEETTT---TEEEEEEECTTSCCEEEEEEEECSS-----SCCCEEECTTSSEEEEECTT------------
T ss_pred ECCCCCEEEEEecCC---CEEEEEEEcCCCCceEEeeeecCCC-----ccceEEECCCCCEEEEecCC------------
Confidence 999999887654222 3466666552112222222211111 11137799999998887621
Q ss_pred CCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 386 RGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 386 ~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
.....+|.+|.++|+.+.+.
T Consensus 298 ------~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 298 ------SHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp ------TCEEEEEEEETTTTEEEEEE
T ss_pred ------CCeEEEEEEcCCCceeeEcc
Confidence 12223555577788776653
No 187
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.66 E-value=2.7e-15 Score=151.72 Aligned_cols=198 Identities=13% Similarity=0.073 Sum_probs=126.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH-HHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEA 588 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~ 588 (752)
.|.||++||.+... +....|. ... ..|++. |.|++ .+.+|+|.+.... .......+|+.+
T Consensus 33 g~~vvllHG~~~~~--------~~~~~w~----~~~~~~L~~~-~~vi~---~D~~G~G~S~~~~~~~~~~~~~a~dl~~ 96 (286)
T 2puj_A 33 GETVIMLHGGGPGA--------GGWSNYY----RNVGPFVDAG-YRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKG 96 (286)
T ss_dssp SSEEEEECCCSTTC--------CHHHHHT----TTHHHHHHTT-CEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCC--------CcHHHHH----HHHHHHHhcc-CEEEE---ECCCCCCCCCCCCCcCcCHHHHHHHHHH
Confidence 36899999953100 0001121 234 556554 99999 5667888775442 234555666655
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--CC--cc-C------c---cc------
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LT--PF-G------F---QT------ 648 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~--~~--~~-~------~---~~------ 648 (752)
.++.+ +.+++.|+||||||.+|+.+|.++|++++++|++++..... .. .. . . ..
T Consensus 97 ~l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T 2puj_A 97 LMDAL------DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQ 170 (286)
T ss_dssp HHHHT------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHh------CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHH
Confidence 55443 23689999999999999999999999999999998754211 00 00 0 0 00
Q ss_pred ---------cccc------hhh----hHH---HHH---------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 649 ---------EFRT------LWE----ATN---VYI---------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 649 ---------~~~~------~~~----~~~---~~~---------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
.... .+. .+. .+. ..+....+.++++|+|+++|++|..+| +..++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~ 248 (286)
T 2puj_A 171 MLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKL 248 (286)
T ss_dssp HHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHH
T ss_pred HHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHH
Confidence 0000 000 000 000 011223456789999999999999998 8887777
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
.+.+. ..++++++++||... .+.++.+.+.+.+||.+
T Consensus 249 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 249 LWNID----DARLHVFSKCGAWAQ-WEHADEFNRLVIDFLRH 285 (286)
T ss_dssp HHHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred HHHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 66543 468999999999765 45678888999999975
No 188
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.66 E-value=2.1e-16 Score=159.01 Aligned_cols=222 Identities=10% Similarity=0.028 Sum_probs=136.5
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
.+...+...++ .+......+ ..|+||++||.+... .. +......|+++||.|++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~~-----------~~----~~~~~~~l~~~g~~v~~- 56 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSSG-----------AI----FAPQLEGEIGKKWRVIA- 56 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCCG-----------GG----GHHHHHSHHHHHEEEEE-
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCch-----------hH----HHHHHhHHHhcCCeEEe-
Confidence 44555665554 555443321 258999999964211 11 22345566778999999
Q ss_pred CCCCCCCCCCCCCCc-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 562 PSIPIIGEGDKLPND-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 562 ~~~~~~g~g~~~~~~-----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+.+|+|.+.... .......+|+.++++.+ +.++++|+||||||.+++.++.++|+ +.++|++++.
T Consensus 57 --~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 57 --PDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp --ECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred --ecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 5566777775432 12344555555555544 23589999999999999999999998 6777766654
Q ss_pred CCCCCC-------ccCccc---cccc--h--------------hhhHHHHH------------------hcChhhhcCCC
Q 004456 637 YNKTLT-------PFGFQT---EFRT--L--------------WEATNVYI------------------EMSPITHANKI 672 (752)
Q Consensus 637 ~~~~~~-------~~~~~~---~~~~--~--------------~~~~~~~~------------------~~~~~~~~~~~ 672 (752)
...... ...... .... . ......+. ..+....+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (279)
T 4g9e_A 128 PVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA 207 (279)
T ss_dssp CCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC
T ss_pred CCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc
Confidence 321100 000000 0000 0 00000000 01122234667
Q ss_pred CCCEEEEEeCCCCCCCCCHHHHHHHH-HHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 673 KKPILIIHGEVDDKVGLFPMQAERFF-DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 673 ~~P~li~~G~~D~~v~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
++|+|+++|++|..+| ...++.+. +.+ ..+++++++++||... .+.++.+.+.+.+||++.-..+.
T Consensus 208 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~~~ 274 (279)
T 4g9e_A 208 QLPIAVVNGRDEPFVE--LDFVSKVKFGNL----WEGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQLEH 274 (279)
T ss_dssp CSCEEEEEETTCSSBC--HHHHTTCCCSSB----GGGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEEcCCCcccc--hHHHHHHhhccC----CCCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhhhh
Confidence 8999999999999998 77665554 222 2457899999999855 56788899999999999876554
No 189
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.66 E-value=2.1e-15 Score=152.56 Aligned_cols=214 Identities=16% Similarity=0.120 Sum_probs=133.4
Q ss_pred cCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCC
Q 004456 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (752)
Q Consensus 489 ~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (752)
..+|..++....-+++ .|+||++||.+... +....| ......|++ +|.|++ .+.+|
T Consensus 13 ~~~g~~l~y~~~g~~g--------~p~vvllHG~~~~~--------~~~~~~----~~~~~~L~~-~~~vi~---~D~~G 68 (285)
T 1c4x_A 13 PSGTLASHALVAGDPQ--------SPAVVLLHGAGPGA--------HAASNW----RPIIPDLAE-NFFVVA---PDLIG 68 (285)
T ss_dssp CCTTSCEEEEEESCTT--------SCEEEEECCCSTTC--------CHHHHH----GGGHHHHHT-TSEEEE---ECCTT
T ss_pred EECCEEEEEEecCCCC--------CCEEEEEeCCCCCC--------cchhhH----HHHHHHHhh-CcEEEE---ecCCC
Confidence 3467777765542211 37799999953100 000111 123445555 499999 56667
Q ss_pred CCCCCCCc---hhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004456 569 EGDKLPND---RFVEQL----VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 641 (752)
Q Consensus 569 ~g~~~~~~---~~~~~~----~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~ 641 (752)
+|.+.... ...... .+|+.+.++.+ + .+++.|+||||||.+|+.++.++|++++++|++++......
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~ 142 (285)
T 1c4x_A 69 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---G---IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN 142 (285)
T ss_dssp STTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCS
T ss_pred CCCCCCCCCcccchhhhhhhHHHHHHHHHHHh---C---CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCC
Confidence 77764432 234455 56655555544 2 36899999999999999999999999999999987542110
Q ss_pred C--c-----cCc---c---------------cccc--ch------h---hhHHHHH---h------------cChhhhcC
Q 004456 642 T--P-----FGF---Q---------------TEFR--TL------W---EATNVYI---E------------MSPITHAN 670 (752)
Q Consensus 642 ~--~-----~~~---~---------------~~~~--~~------~---~~~~~~~---~------------~~~~~~~~ 670 (752)
. . ..+ . .... .. + ..+..+. . ......+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (285)
T 1c4x_A 143 ARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLG 222 (285)
T ss_dssp SCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHT
T ss_pred ccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhc
Confidence 0 0 000 0 0000 00 0 0000000 0 00123456
Q ss_pred CCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 671 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 671 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++++|+|+++|++|..+| +..++.+.+.+ ...++++++++||... .+.++.+.+.+.+||.+
T Consensus 223 ~i~~P~lii~G~~D~~~p--~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 223 RLPHDVLVFHGRQDRIVP--LDTSLYLTKHL----KHAELVVLDRCGHWAQ-LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp TCCSCEEEEEETTCSSSC--THHHHHHHHHC----SSEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEeCCCeeeC--HHHHHHHHHhC----CCceEEEeCCCCcchh-hcCHHHHHHHHHHHHhc
Confidence 789999999999999998 88877776654 3568999999999865 45678888899999864
No 190
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=4.7e-14 Score=146.10 Aligned_cols=288 Identities=11% Similarity=-0.025 Sum_probs=171.2
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCc-eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCC
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESP 81 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~-~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~ 81 (752)
...|.++++.. ++.......+... ....++|||||++|+++. .....|+++++++++... +....
T Consensus 10 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 10 PDKLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------NKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp TTEEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------TTTTEEEEEETTTCCEEEEEECCB
T ss_pred CCeEEEEECCC----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---------CCCCeEEEEECCCCCeEeeEEcCC
Confidence 35688888866 6554433233211 377899999999987764 334689999999887654 32221
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhh--cccEE
Q 004456 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY--TTAQL 159 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~i 159 (752)
.......+..+.|+|||+.|++......... ..+ ....|
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~---------------------------------------~~~~~~~~~i 117 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLEL---------------------------------------THFEVQPTRV 117 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECS---------------------------------------SCEEECCCEE
T ss_pred cccccccccceEECCCCCEEEEEeccccccc---------------------------------------ccccccCceE
Confidence 0000012457899999999888732100000 000 11689
Q ss_pred EEEcc-CCCcc-ccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCccc
Q 004456 160 VLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (752)
Q Consensus 160 ~~~~~-~G~~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (752)
+++++ +++.. .+........+.|||||++|++. . ..+++||+.+++..........
T Consensus 118 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~-------------~~i~~~d~~~~~~~~~~~~~~~------- 175 (337)
T 1pby_B 118 ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--G-------------RDLHVMDPEAGTLVEDKPIQSW------- 175 (337)
T ss_dssp EEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--S-------------SSEEEEETTTTEEEEEECSTTT-------
T ss_pred EEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--C-------------CeEEEEECCCCcEeeeeecccc-------
Confidence 99999 55433 33333566788999999999887 2 2699999988766543332211
Q ss_pred CCccccccceeeeeCCCceEEEEEeccC------------CCCccccCccceEEeccCCCCCCCCCeEEe--ecccceee
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDR------------GDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRS 303 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~ 303 (752)
...+.|+|||+. |++....++ ............++++|+ .+++...+. ........
T Consensus 176 ------~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~ 245 (337)
T 1pby_B 176 ------EAETYAQPDVLA-VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL---ETGEMAMREVRIMDVFYFS 245 (337)
T ss_dssp ------TTTTBCCCBCCC-CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET---TTCCEEEEEEEECSSCEEE
T ss_pred ------CCCceeCCCccE-EeeeccCCCceeeeeeccccccccccccccccceEEEeC---CCCCceEeecCCCCCceee
Confidence 123488999987 544321110 000000011225788888 444443322 22334567
Q ss_pred eeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEE
Q 004456 304 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 383 (752)
Q Consensus 304 ~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~ 383 (752)
++|+|||+.+++. ...|+++++.++ +........ . ..-.++|+|||++|++...
T Consensus 246 ~~~s~dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~--~-----~~~~~~~s~dg~~l~~~~~----------- 299 (337)
T 1pby_B 246 TAVNPAKTRAFGA------YNVLESFDLEKN--ASIKRVPLP--H-----SYYSVNVSTDGSTVWLGGA----------- 299 (337)
T ss_dssp EEECTTSSEEEEE------ESEEEEEETTTT--EEEEEEECS--S-----CCCEEEECTTSCEEEEESB-----------
T ss_pred EEECCCCCEEEEe------CCeEEEEECCCC--cCcceecCC--C-----ceeeEEECCCCCEEEEEcC-----------
Confidence 8999999988876 246999998874 222222111 1 1113679999998877641
Q ss_pred ccCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 384 NGRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 384 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
...|.+||+++++.....
T Consensus 300 ----------~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 300 ----------LGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp ----------SSEEEEEETTTCCEEEEE
T ss_pred ----------CCcEEEEECcCCcEEEEE
Confidence 125999999988765443
No 191
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.66 E-value=1.9e-15 Score=152.18 Aligned_cols=237 Identities=13% Similarity=0.090 Sum_probs=147.1
Q ss_pred CceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEE
Q 004456 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (752)
Q Consensus 480 ~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (752)
..++.+++.+. .+..+..+ +|+.+ + |+||++||.+.. .....|.... .....+++.||.|
T Consensus 4 ~~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~v 64 (280)
T 1dqz_A 4 LPVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSV 64 (280)
T ss_dssp SCEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEE
T ss_pred ceEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEE
Confidence 35667777655 34555555 45442 1 589999996310 0001111100 1224566789999
Q ss_pred EecCCCCCCCCCC--CC-------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 559 LAGPSIPIIGEGD--KL-------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 559 ~~~~~~~~~g~g~--~~-------~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
++++.....++.. .. ....+.....++ ++.++.++..++.++++|+||||||++|+.++.++|++|++
T Consensus 65 v~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~ 141 (280)
T 1dqz_A 65 IMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTRE---MPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPY 141 (280)
T ss_dssp EEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTH---HHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSE
T ss_pred EEECCCCCccccCCCCCCccccccccccHHHHHHHH---HHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheE
Confidence 9966432222211 10 011122222333 44444443346667999999999999999999999999999
Q ss_pred EEEccCCCCCCCCccC-cc---------ccccchhh--hHHHHHhcChhhhcCCC---CCCEEEEEeCCCC---------
Q 004456 630 GIARSGSYNKTLTPFG-FQ---------TEFRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD--------- 685 (752)
Q Consensus 630 ~v~~~~~~~~~~~~~~-~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~---~~P~li~~G~~D~--------- 685 (752)
+|+++|..+....... .. ......|. ....+...+|...+.++ .+|+++.||+.|.
T Consensus 142 ~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~ 221 (280)
T 1dqz_A 142 AASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIP 221 (280)
T ss_dssp EEEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHH
T ss_pred EEEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccc
Confidence 9999998764321000 00 00000010 11245555666544443 5899999999997
Q ss_pred -----CCCCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 686 -----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 686 -----~v~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
.++ ..++++++++|++.| .++++.++++++|.+ ..+...+...+.||.+.|++
T Consensus 222 ~~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~---~~w~~~l~~~l~~l~~~l~~ 280 (280)
T 1dqz_A 222 AKFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSW---PYWNEQLVAMKADIQHVLNG 280 (280)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSH---HHHHHHHHHTHHHHHHHHHC
T ss_pred hhhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCh---HHHHHHHHHHHHHHHHHhCC
Confidence 456 889999999999999 999999998889974 33566778888999888763
No 192
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.66 E-value=1.5e-15 Score=160.39 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=62.0
Q ss_pred hcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCC-CCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 668 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 668 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
.+.++++|+|+++|++|.++| +..++++.+.+...+..++++++++ +||... .+.++.+.+.+.+||++++.
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCCS
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhhh
Confidence 456789999999999999999 9999999999988777889999998 999765 44567888999999998763
No 193
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.65 E-value=3.7e-14 Score=148.79 Aligned_cols=206 Identities=11% Similarity=0.076 Sum_probs=126.1
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCc
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~ 255 (752)
....++|||||++|++.+...+ ..|.+||+.+.+.......... +..++|||||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d-----------~~i~iwd~~~~~~~~~~~~~~~-------------V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVP-----------AIMRIIDPSDLTEKFEIETRGE-------------VKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSS-----------CEEEEEETTTTEEEEEEECSSC-------------CCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECCCC-----------CEEEEeECCCCcEEEEeCCCCc-------------eEEEEEccCCce
Confidence 4567899999999988765432 4799999988766544333222 678999999997
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
|+..+ .+.+.+++.. .+....... .....+..++|+|||+.++..+........++.+++..
T Consensus 191 -l~s~s-------------~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 191 -VAYIT-------------GSSLEVISTV--TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp -EEEEC-------------SSCEEEEETT--TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred -EEecc-------------ceeEEEEEec--cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 65553 1234444441 232222222 23446788999999999998875554445677777665
Q ss_pred CCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE-ee
Q 004456 334 KDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI-WE 412 (752)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l-~~ 412 (752)
............... ...-.++|||||++||..+.+. .|.+||+.+++.... ..
T Consensus 255 ~~~~~~~~~~~~~~~----~~V~~~~~Spdg~~lasgs~D~---------------------~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRF----KGITSMDVDMKGELAVLASNDN---------------------SIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp TEEEEEEEEEEESSC----SCEEEEEECTTSCEEEEEETTS---------------------CEEEEETTTTEEEEEETT
T ss_pred ceecceeeeeecCCC----CCeEeEEECCCCCceEEEcCCC---------------------EEEEEECCCCcEEEEecC
Confidence 311111111110000 0111367999999999887331 489999998876432 22
Q ss_pred ccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
.... .+.. ++|||||+.|+-... -..|.++++..
T Consensus 310 gH~~----~V~~-------v~fSpdg~~laS~S~----D~tvrvw~ip~ 343 (365)
T 4h5i_A 310 AHSF----AITE-------VTISPDSTYVASVSA----ANTIHIIKLPL 343 (365)
T ss_dssp SSSS----CEEE-------EEECTTSCEEEEEET----TSEEEEEECCT
T ss_pred cccC----CEEE-------EEECCCCCEEEEEeC----CCeEEEEEcCC
Confidence 2111 1333 589999998865432 23588888754
No 194
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.65 E-value=2.9e-14 Score=148.44 Aligned_cols=196 Identities=15% Similarity=0.182 Sum_probs=125.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcce--eccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~--~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
.+...+|||||++||..+ ....|.|++++++... ......+ ...+..++|||||+.|+..+.+
T Consensus 18 ~v~~l~~sp~g~~las~~----------~D~~i~iw~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g~~l~s~s~D-- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG----------GDRRIRIWGTEGDSWICKSVLSEGH---QRTVRKVAWSPCGNYLASASFD-- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEE----------TTSCEEEEEEETTEEEEEEEECSSC---SSCEEEEEECTTSSEEEEEETT--
T ss_pred cEEEEEECCCCCEEEEEc----------CCCeEEEEEcCCCcceeeeeecccc---CCcEEEEEECCCCCEEEEEECC--
Confidence 478899999999999864 3467788888777532 1111111 1147789999999998876431
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC---ccccCCc-cceeccccCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPSP 184 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~---~~~l~~~-~~~~~~~~Sp 184 (752)
+.+.++++ .+. ...+..+ ..+..++|+|
T Consensus 83 -----------------------------------------------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 83 -----------------------------------------------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp -----------------------------------------------SCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 35666666 332 2334444 7788999999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEec
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~ 263 (752)
||++|+..+.+. .+.+||+..+.. ..+... ......+..+.|+|||+. |+..+
T Consensus 116 ~~~~l~s~s~D~-------------~v~iwd~~~~~~~~~~~~~----------~~h~~~v~~~~~~p~~~~-l~s~s-- 169 (345)
T 3fm0_A 116 SGNLLATCSRDK-------------SVWVWEVDEEDEYECVSVL----------NSHTQDVKHVVWHPSQEL-LASAS-- 169 (345)
T ss_dssp TSSEEEEEETTS-------------CEEEEEECTTSCEEEEEEE----------CCCCSCEEEEEECSSSSC-EEEEE--
T ss_pred CCCEEEEEECCC-------------eEEEEECCCCCCeEEEEEe----------cCcCCCeEEEEECCCCCE-EEEEe--
Confidence 999998877664 799999876532 111111 011123678999999997 65554
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCC---eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEc
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 330 (752)
..+.+.+++. ..+.. ..+......+..++|+|||+.|+..+.+ +.-+||...
T Consensus 170 ----------~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D--~~v~iW~~~ 224 (345)
T 3fm0_A 170 ----------YDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD--RTVRIWRQY 224 (345)
T ss_dssp ----------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEEEE
T ss_pred ----------CCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC--CeEEEeccc
Confidence 2335777776 32322 2233455678899999999998887622 334455543
No 195
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=4.2e-16 Score=148.72 Aligned_cols=183 Identities=12% Similarity=0.096 Sum_probs=108.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC--CcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~ 590 (752)
.|+|||+||.. +++..+. ...+...+.++ +|.|++ .+..|+|+ +..+++...+
T Consensus 2 mptIl~lHGf~-----------ss~~s~k--~~~l~~~~~~~~~~~~v~~---pdl~~~g~---------~~~~~l~~~~ 56 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSAK--ATTFKSWLQQHHPHIEMQI---PQLPPYPA---------EAAEMLESIV 56 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCHH--HHHHHHHHHHHCTTSEEEC---CCCCSSHH---------HHHHHHHHHH
T ss_pred CcEEEEeCCCC-----------CCCCccH--HHHHHHHHHHcCCCcEEEE---eCCCCCHH---------HHHHHHHHHH
Confidence 48999999932 1111110 11233455554 599998 34445432 2233332222
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC----ccccccchhhhHHHHHhcChh
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG----FQTEFRTLWEATNVYIEMSPI 666 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 666 (752)
+ +. +.++|+|+|+||||++|+.++.+.|.....++...+..+....... .....................
T Consensus 57 ~---~~---~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 57 M---DK---AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp H---HH---TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred H---hc---CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 2 22 3478999999999999999999998876666655443221100000 000000000001111112333
Q ss_pred hhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 667 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 667 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
....++++|+|++||++|.+|| +.++.++++ ++++.++++++|.+.. .+++++.|.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~---~~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVG---FDHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTT---GGGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCC---HHHHHHHHHHHHh
Confidence 4456778999999999999999 888877653 3589999999998643 4567888999996
No 196
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.65 E-value=8.3e-14 Score=144.68 Aligned_cols=267 Identities=9% Similarity=0.066 Sum_probs=169.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.+....|||||++||..+ ....|.++++.+++... +..+.. .+..+.|+|||+.|+..+.+
T Consensus 57 ~v~~~~~s~d~~~l~s~s----------~Dg~v~iWd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~s~~~d--- 118 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSAS----------QDGKLIIWDSYTTNKVHAIPLRSS-----WVMTCAYAPSGNYVACGGLD--- 118 (340)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTTEEEEEETTTCCEEEEEECSSS-----CEEEEEECTTSSEEEEEETT---
T ss_pred ceEEEEECCCCCEEEEEe----------CCCcEEEEECCCCCcceEeecCCc-----cEEEEEECCCCCEEEEEeCC---
Confidence 588899999999998863 34688999988776443 322222 36678999999988876421
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC--c---cccCCc-cceeccccC
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--A---KDFGTP-AVYTAVEPS 183 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~--~---~~l~~~-~~~~~~~~S 183 (752)
+.+.++++ .++ . ..+..+ ..+..+.|+
T Consensus 119 ----------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 119 ----------------------------------------------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152 (340)
T ss_dssp ----------------------------------------------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE
T ss_pred ----------------------------------------------CeEEEEECccCCCcceeEEEecCCCccEEEEEEC
Confidence 46777777 331 1 122333 667788999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEec
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~ 263 (752)
|+++ |+..+.+ ..+.+||+.+++........ ...+..++|+|||+. ++..+
T Consensus 153 ~~~~-l~s~s~d-------------~~i~~wd~~~~~~~~~~~~h------------~~~v~~~~~~~~~~~-l~sg~-- 203 (340)
T 1got_B 153 DDNQ-IVTSSGD-------------TTCALWDIETGQQTTTFTGH------------TGDVMSLSLAPDTRL-FVSGA-- 203 (340)
T ss_dssp ETTE-EEEEETT-------------SCEEEEETTTTEEEEEECCC------------SSCEEEEEECTTSSE-EEEEE--
T ss_pred CCCc-EEEEECC-------------CcEEEEECCCCcEEEEEcCC------------CCceEEEEECCCCCE-EEEEe--
Confidence 9987 5444443 37999999877554322211 122678999999985 44443
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccc
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 343 (752)
..+.+.+||+. .+.....+......+..++|+|||+.|+.++ ....|.++|+..+ .......
T Consensus 204 ----------~d~~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s----~d~~v~iwd~~~~--~~~~~~~ 265 (340)
T 1got_B 204 ----------CDASAKLWDVR--EGMCRQTFTGHESDINAICFFPNGNAFATGS----DDATCRLFDLRAD--QELMTYS 265 (340)
T ss_dssp ----------TTSCEEEEETT--TCSEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTT--EEEEEEC
T ss_pred ----------CCCcEEEEECC--CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc----CCCcEEEEECCCC--cEEEEEc
Confidence 33478888883 2222334555566788999999999988876 2335788888763 2222111
Q ss_pred cccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhcee
Q 004456 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (752)
Q Consensus 344 ~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (752)
..... ...-.++|+|||++|+....+ ..|.+||+.+++.......... .+.
T Consensus 266 ~~~~~----~~v~~~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~~~~h~~----~v~ 316 (340)
T 1got_B 266 HDNII----CGITSVSFSKSGRLLLAGYDD---------------------FNCNVWDALKADRAGVLAGHDN----RVS 316 (340)
T ss_dssp CTTCC----SCEEEEEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECCSS----CEE
T ss_pred cCCcc----cceEEEEECCCCCEEEEECCC---------------------CeEEEEEcccCcEeeEeecCCC----cEE
Confidence 11000 011236799999998887632 1589999888765444333221 122
Q ss_pred eeecCCcceecccCCCEEEEEE
Q 004456 424 ALVFGQGEEDINLNQLKILTSK 445 (752)
Q Consensus 424 ~~~~~~~~~~~s~d~~~l~~~~ 445 (752)
. ++|+|||..|+...
T Consensus 317 ~-------~~~s~dg~~l~s~s 331 (340)
T 1got_B 317 C-------LGVTDDGMAVATGS 331 (340)
T ss_dssp E-------EEECTTSSCEEEEE
T ss_pred E-------EEEcCCCCEEEEEc
Confidence 3 47999999876543
No 197
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.65 E-value=2.3e-13 Score=139.39 Aligned_cols=278 Identities=10% Similarity=0.121 Sum_probs=175.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||..+ ....|.++++.+++..+....... .+..+.|+||++.|+..+.+
T Consensus 25 ~v~~~~~s~~~~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~d---- 86 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGHKL----GISDVAWSSDSNLLVSASDD---- 86 (312)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEECCCCCEEEEee----------CCCeEEEEeCCCcccchhhccCCC----ceEEEEEcCCCCEEEEECCC----
Confidence 588899999999998863 335788888887775544322221 46788999999988876421
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.|.++++ +++ ...+..+ ..+..+.|+|||+.
T Consensus 87 ---------------------------------------------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 87 ---------------------------------------------KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp ---------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 57888898 664 3444444 67889999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|+..+.+. .+.+||+.+++.. .+.... ..+..+.|+|||+. |+..+
T Consensus 122 l~s~~~d~-------------~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~~~~------ 168 (312)
T 4ery_A 122 IVSGSFDE-------------SVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSL-IVSSS------ 168 (312)
T ss_dssp EEEEETTS-------------CEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSE-EEEEE------
T ss_pred EEEEeCCC-------------cEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCE-EEEEe------
Confidence 98876653 7999999866543 332221 22668999999996 55443
Q ss_pred CccccCccceEEeccCCCCCCCC-CeEEe-ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccc
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEK-PEILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 345 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~-~~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 345 (752)
..+.|.++|+ ..+. ...+. .....+..++|+|+++.|+... ..+.|.++++.++ +........
T Consensus 169 ------~d~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~--~~~~~~~~~ 233 (312)
T 4ery_A 169 ------YDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDYSKG--KCLKTYTGH 233 (312)
T ss_dssp ------TTSCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE----TTTEEEEEETTTT--EEEEEECSS
T ss_pred ------CCCcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEc----CCCeEEEEECCCC--cEEEEEEec
Confidence 3347888888 3333 22332 2334577889999999998876 3346888888774 222222111
Q ss_pred cccccCCCCCCceeeC-CCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceee
Q 004456 346 FENVYSDPGSPMMTRT-STGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (752)
Q Consensus 346 ~~~~~~~~~~p~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (752)
.... ......++ +++++|+....+ ..|.+||+.+++.......... .+.
T Consensus 234 ~~~~----~~~~~~~~~~~~~~l~sg~~d---------------------g~i~vwd~~~~~~~~~~~~h~~----~v~- 283 (312)
T 4ery_A 234 KNEK----YCIFANFSVTGGKWIVSGSED---------------------NLVYIWNLQTKEIVQKLQGHTD----VVI- 283 (312)
T ss_dssp CCSS----SCCCEEEECSSSCEEEECCTT---------------------SCEEEEETTTCCEEEEECCCSS----CEE-
T ss_pred CCce----EEEEEEEEeCCCcEEEEECCC---------------------CEEEEEECCCchhhhhhhccCC----cEE-
Confidence 1110 11112233 566666655422 1499999998876544433221 122
Q ss_pred eecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 425 ~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
.++|+|++..++....+. ...|.+|+
T Consensus 284 ------~~~~~p~~~~l~s~~~~~--d~~i~~W~ 309 (312)
T 4ery_A 284 ------STACHPTENIIASAALEN--DKTIKLWK 309 (312)
T ss_dssp ------EEEECSSSSEEEEEECTT--TCCEEEEE
T ss_pred ------EEeecCcCCceEEEEccC--CccEEEec
Confidence 247899999876553222 22355554
No 198
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.65 E-value=2.1e-15 Score=155.93 Aligned_cols=217 Identities=16% Similarity=0.146 Sum_probs=137.3
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 568 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g 568 (752)
.+|.++.+..+-|... ..+.+.||++||++... ..|. .....|++ .||.|++ .|.+|
T Consensus 35 ~~g~~l~y~~~G~~~~----~~~g~plvllHG~~~~~-----------~~w~----~~~~~l~~~~~~~Via---~D~rG 92 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA----QPHALPLIVLHGGPGMA-----------HNYV----ANIAALADETGRTVIH---YDQVG 92 (330)
T ss_dssp ETTEEEEEEEECCSSC----CTTCCCEEEECCTTTCC-----------SGGG----GGGGGHHHHHTCCEEE---ECCTT
T ss_pred ecCcEEEEEEecCccC----CCCCCcEEEECCCCCCc-----------hhHH----HHHHHhccccCcEEEE---ECCCC
Confidence 3678888888876421 11123588899964211 1121 23345554 6999999 66778
Q ss_pred CCCCCC--Cc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-
Q 004456 569 EGDKLP--ND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 641 (752)
Q Consensus 569 ~g~~~~--~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~- 641 (752)
+|.+.. .. .......+|+.+.++.+. .+++.|+||||||++++.+|.++|++++++|++++......
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg------~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 166 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTALG------IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW 166 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHcC------CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH
Confidence 887743 21 134566777777776662 36899999999999999999999999999998876432100
Q ss_pred ----------Cc------------cC-ccc-c--------------ccchhh--hHH----------HHH----------
Q 004456 642 ----------TP------------FG-FQT-E--------------FRTLWE--ATN----------VYI---------- 661 (752)
Q Consensus 642 ----------~~------------~~-~~~-~--------------~~~~~~--~~~----------~~~---------- 661 (752)
.+ .. ... . ....+. ... .+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 3nwo_A 167 SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246 (330)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhh
Confidence 00 00 000 0 000000 000 000
Q ss_pred -----hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHH
Q 004456 662 -----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 736 (752)
Q Consensus 662 -----~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 736 (752)
..+....+.++++|+|+++|++|.++| ..++++.+.+ ...+++++|++||... .+.++.+.+.+.+|
T Consensus 247 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~i----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHI----PDVRSHVFPGTSHCTH-LEKPEEFRAVVAQF 318 (330)
T ss_dssp CSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHC----SSEEEEEETTCCTTHH-HHSHHHHHHHHHHH
T ss_pred hccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhC----CCCcEEEeCCCCCchh-hcCHHHHHHHHHHH
Confidence 011223456789999999999999765 4455554443 4579999999999765 56788999999999
Q ss_pred HHHHhc
Q 004456 737 LQKYCL 742 (752)
Q Consensus 737 l~~~l~ 742 (752)
|+++-.
T Consensus 319 L~~~~~ 324 (330)
T 3nwo_A 319 LHQHDL 324 (330)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 988743
No 199
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.7e-14 Score=154.33 Aligned_cols=308 Identities=10% Similarity=0.101 Sum_probs=177.9
Q ss_pred eeceeEecCCCCeEEEeecc-ccccccccCcceEEEEEcccCcce-eccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRV-DEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~-~~~~~~~~~~~~l~v~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
.+...+|||||+.++++... +...........|+++++++++.. .+..... ...+..+.|+||++.|+..+.+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-- 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQV---DSKFNDLDWSHNNKIIAGALDN-- 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCC---SSCEEEEEECSSSSCEEEEESS--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEec---CCceEEEEECCCCCeEEEEccC--
Confidence 57778999999955554321 000000133467899999887632 2211111 1146789999999998876321
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-C---C--CccccCCc-cceecccc
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---G--TAKDFGTP-AVYTAVEP 182 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~---G--~~~~l~~~-~~~~~~~~ 182 (752)
+.|.++++ . + ....+..+ ..+..++|
T Consensus 89 -----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 89 -----------------------------------------------GSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp -----------------------------------------------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred -----------------------------------------------CeEEEeecccccccccchhhccCCccceEEEEE
Confidence 46777887 3 2 23344444 78889999
Q ss_pred CCC-CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 183 SPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 183 SpD-Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
+|| ++.|+....+ +.|.+||+.+.+........ .....+......+..++|+|++.. ++++.
T Consensus 122 ~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~ 184 (416)
T 2pm9_A 122 NAKQDNVLASGGNN-------------GEIFIWDMNKCTESPSNYTP---LTPGQSMSSVDEVISLAWNQSLAH-VFASA 184 (416)
T ss_dssp CSSSTTBEEEECSS-------------SCEEBCBTTTTSSCTTTCCC---BCCCCSCCSSCCCCEEEECSSCTT-EEEEE
T ss_pred cCCCCCEEEEEcCC-------------CeEEEEECCCCccccccccc---cccccccCCCCCeeEEEeCCCCCc-EEEEE
Confidence 999 6766665444 37999999876410000000 000011122234778999999655 44443
Q ss_pred eccCCCCccccCccceEEeccCCCCCCCCCe-EEeec------ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l~~~------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
. ..+.|.++|+ ..+... .+... ...+..++|+|++..+++....+.....|.++++.++
T Consensus 185 ~-----------~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 185 G-----------SSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp S-----------SSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred c-----------CCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 1 3447888888 333332 23322 5668899999998654444323322235777787764
Q ss_pred Cccceeccc-cccccccCCCCCCceeeCC-CCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEee
Q 004456 335 DVAPRVLFD-RVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (752)
Q Consensus 335 ~~~~~~l~~-~~~~~~~~~~~~p~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (752)
. .+..... .... ..-.++|+| ++++|+....++ .|.+||+.+++......
T Consensus 251 ~-~~~~~~~~~~~~------~v~~~~~s~~~~~~l~s~~~dg---------------------~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 251 N-TPLQTLNQGHQK------GILSLDWCHQDEHLLLSSGRDN---------------------TVLLWNPESAEQLSQFP 302 (416)
T ss_dssp T-SCSBCCCSCCSS------CEEEEEECSSCSSCEEEEESSS---------------------EEEEECSSSCCEEEEEE
T ss_pred C-CCcEEeecCccC------ceeEEEeCCCCCCeEEEEeCCC---------------------CEEEeeCCCCccceeec
Confidence 1 2222222 1111 112367999 888888776321 58999998887654433
Q ss_pred ccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCe
Q 004456 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (752)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~ 464 (752)
... .....++|+||+..++++... ...|.+|++.++..
T Consensus 303 ~~~-----------~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 303 ARG-----------NWCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLTN 340 (416)
T ss_dssp CSS-----------SCCCCEEECTTCTTEEEECCS---SSEEEEEESCCCCC
T ss_pred CCC-----------CceEEEEECCCCCCEEEEEec---CCcEEEEEccCCCC
Confidence 221 112246899999555555433 34688899876553
No 200
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.65 E-value=4.7e-14 Score=149.77 Aligned_cols=288 Identities=11% Similarity=0.087 Sum_probs=168.7
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCc-------------cccccccceEEecC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDI-------------CLNAVFGSFVWVNN 97 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~-------------~~~~~~~~~~wspd 97 (752)
.+...+|||||++||..+ ...+.++++.+|+... +...... .....+..+.|+||
T Consensus 66 ~V~~v~fspdg~~la~g~-----------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-----------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-----------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred EEEEEEECCCCCEEEEEc-----------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 477899999999999843 2456777777766432 3211100 00012567899999
Q ss_pred CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc-
Q 004456 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP- 174 (752)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~- 174 (752)
|+.|+..+.+ +.|.++|+ +++. ..+..+
T Consensus 135 g~~l~s~~~d-------------------------------------------------~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGAED-------------------------------------------------RLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEETT-------------------------------------------------SCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEcCC-------------------------------------------------CeEEEEECCCCcEEEEEccCC
Confidence 9998876321 57888898 5543 344444
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeee-CC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DK 253 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG 253 (752)
..+..++|+|||++|+..+.+. .+.+||+.+++........ ..+..++|+| ||
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d~-------------~v~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGDR-------------TVRIWDLRTGQCSLTLSIE-------------DGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-------------EEEEEETTTTEEEEEEECS-------------SCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCCC-------------cEEEEECCCCeeEEEEEcC-------------CCcEEEEEECCCC
Confidence 7788999999999998776553 7999999877654433222 1256789999 88
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEE-------eecccceeeeeeecCCceEEEeeecccCcee
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEIL-------HKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l-------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 325 (752)
+. |+..+ ..+.+.+||+ ..+. ...+ ......+..++|+|||+.|+.++ ....
T Consensus 220 ~~-l~~~s------------~d~~v~iwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s----~d~~ 279 (393)
T 1erj_A 220 KY-IAAGS------------LDRAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS----LDRS 279 (393)
T ss_dssp CE-EEEEE------------TTSCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE----TTSE
T ss_pred CE-EEEEc------------CCCcEEEEEC---CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe----CCCE
Confidence 85 54443 3346788887 3332 2223 12345678899999999988766 2335
Q ss_pred EEEEcCCCCCccce--------eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCee
Q 004456 326 TWLVCPGSKDVAPR--------VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 397 (752)
Q Consensus 326 l~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 397 (752)
|.++++........ .......+. ...-.++|+++|++|+..+.++ .|
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~sgs~D~---------------------~v 334 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHK----DFVLSVATTQNDEYILSGSKDR---------------------GV 334 (393)
T ss_dssp EEEEEC---------------CEEEEEECCS----SCEEEEEECGGGCEEEEEETTS---------------------EE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEeccc----CcEEEEEECCCCCEEEEEeCCC---------------------eE
Confidence 77777765311000 000000000 0111367899999888776321 58
Q ss_pred EEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEEC
Q 004456 398 DLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (752)
Q Consensus 398 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~ 459 (752)
.+||+.+++.......... .+..+.- ....+++|++..|+... . ...|.+|+.
T Consensus 335 ~iwd~~~~~~~~~l~~h~~----~v~~v~~-~~~~~~~p~~~~l~sgs-~---Dg~i~iW~~ 387 (393)
T 1erj_A 335 LFWDKKSGNPLLMLQGHRN----SVISVAV-ANGSSLGPEYNVFATGS-G---DCKARIWKY 387 (393)
T ss_dssp EEEETTTCCEEEEEECCSS----CEEEEEE-CSSCTTCTTCEEEEEEE-T---TSEEEEEEE
T ss_pred EEEECCCCeEEEEECCCCC----CEEEEEe-cCCcCcCCCCCEEEEEC-C---CCcEEECcc
Confidence 9999988876544433221 1222210 01123455666554432 2 234666664
No 201
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.65 E-value=3e-15 Score=141.78 Aligned_cols=186 Identities=11% Similarity=-0.081 Sum_probs=116.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC-CcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~ 591 (752)
.|.||++||.+... .....+.......|+++ ||.|++++. +|.+.. .... .++
T Consensus 4 ~p~vv~lHG~~~~~-----------~~~~~~~~~~~~~l~~~~g~~vi~~d~---~g~~~~--------~~~~----~~~ 57 (194)
T 2qs9_A 4 PSKAVIVPGNGGGD-----------VTTHGWYGWVKKELEKIPGFQCLAKNM---PDPITA--------RESI----WLP 57 (194)
T ss_dssp CCEEEEECCSSSSC-----------TTTSTTHHHHHHHHTTSTTCCEEECCC---SSTTTC--------CHHH----HHH
T ss_pred CCEEEEECCCCCCC-----------cccchHHHHHHHHHhhccCceEEEeeC---CCCCcc--------cHHH----HHH
Confidence 68999999964210 00011111245667777 999999544 443211 1122 233
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCC
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 671 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (752)
.+.+.-.+ .++++|+||||||.+++.++.++| ++++|+++|......... ......+. .......+..
T Consensus 58 ~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~ 125 (194)
T 2qs9_A 58 FMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN---ERASGYFT------RPWQWEKIKA 125 (194)
T ss_dssp HHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH---HHHTSTTS------SCCCHHHHHH
T ss_pred HHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh---hHHHhhhc------ccccHHHHHh
Confidence 33333222 278999999999999999999998 999999998654211000 00000000 0001122233
Q ss_pred CCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 672 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 672 ~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
..+|+|+++|++|..+| +..++++.+.+ . .+++++++++|.+. .+.+ +.+..+++||++......
T Consensus 126 ~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~-~~~p-~~~~~~~~fl~~~~~~~~ 190 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQN-TEFH-ELITVVKSLLKVPALEHH 190 (194)
T ss_dssp HCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCS-SCCH-HHHHHHHHHHTCCCCCCC
T ss_pred hCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccc-hhCH-HHHHHHHHHHHhhhhhhh
Confidence 46799999999999999 99998888877 3 38999999999876 3444 455667799988765543
No 202
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.65 E-value=3.7e-15 Score=157.40 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=114.9
Q ss_pred HHhCCcEEEecCCCCCCC-CCCCCCC----------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEEeChH
Q 004456 551 FLARRFAVLAGPSIPIIG-EGDKLPN----------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYG 612 (752)
Q Consensus 551 l~~~G~~v~~~~~~~~~g-~g~~~~~----------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~-l~G~S~G 612 (752)
|+++||.|++++. +| +|.+... ........+|+.++++.+ +.+++. |+|||||
T Consensus 94 L~~~g~~vi~~D~---~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~G 164 (377)
T 2b61_A 94 LDTDRYFFISSNV---LGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFG 164 (377)
T ss_dssp EETTTCEEEEECC---TTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHH
T ss_pred cccCCceEEEecC---CCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChh
Confidence 5579999999554 45 3333221 123445555555555433 236787 9999999
Q ss_pred HHHHHHHHHhCCCceeEEEEccCCCCCCCCc--------------cCccc---------c---------------c----
Q 004456 613 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--------------FGFQT---------E---------------F---- 650 (752)
Q Consensus 613 G~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~--------------~~~~~---------~---------------~---- 650 (752)
|.+|+.+|.++|++++++|++++........ ..+.. . .
T Consensus 165 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T 2b61_A 165 GMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL 244 (377)
T ss_dssp HHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHH
Confidence 9999999999999999999999864321000 00000 0 0
Q ss_pred --------c---------chhhh--------------H-------HHHHhcC-------hhhhcCCCCCCEEEEEeCCCC
Q 004456 651 --------R---------TLWEA--------------T-------NVYIEMS-------PITHANKIKKPILIIHGEVDD 685 (752)
Q Consensus 651 --------~---------~~~~~--------------~-------~~~~~~~-------~~~~~~~~~~P~li~~G~~D~ 685 (752)
. ..... . ..+...+ ....+.++++|+|+++|++|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~ 324 (377)
T 2b61_A 245 AKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQ 324 (377)
T ss_dssp HHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCS
T ss_pred HHHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcc
Confidence 0 00000 0 0000111 134567789999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCccccHHHHHHHHHHHHHH
Q 004456 686 KVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 686 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++| +.++.+..+.+.+.....++++++ ++||... .+.++.+.+.+.+||++
T Consensus 325 ~~~--~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 325 LFK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SSC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHHHHHHHHT
T ss_pred cCC--ccchHHHHHHHHhcCCCceEEEeCCCCCchhh-hcCHHHHHHHHHHHHhc
Confidence 998 866656666666666678999999 9999865 45577888999999975
No 203
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.1e-14 Score=153.71 Aligned_cols=258 Identities=10% Similarity=0.092 Sum_probs=154.9
Q ss_pred cceeEEeecCCCCCCCCce-eecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEccc----C-cceec
Q 004456 4 FTGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----G-EAKPL 77 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~----g-~~~~l 77 (752)
...|.++++.. +... .+..+.....+..+.|||||++||... ....|.++++.+ . ....+
T Consensus 44 d~~v~iw~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~v~vw~~~~~~~~~~~~~~~ 109 (416)
T 2pm9_A 44 DSSLELWSLLA----ADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL----------DNGSLELYSTNEANNAINSMARF 109 (416)
T ss_dssp CCCCEEEESSS----GGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE----------SSSCEEEECCSSTTSCCCEEEEC
T ss_pred CCeEEEEEccC----CCCCcEEEEEecCCceEEEEECCCCCeEEEEc----------cCCeEEEeecccccccccchhhc
Confidence 34588888876 4321 222233344689999999999998863 235788888876 2 23334
Q ss_pred cCCCCccccccccceEEecC-CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcc
Q 004456 78 FESPDICLNAVFGSFVWVNN-STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (752)
Q Consensus 78 t~~~~~~~~~~~~~~~wspd-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 156 (752)
..+.. .+..+.|+|| ++.|+..+. .
T Consensus 110 ~~h~~-----~v~~~~~~~~~~~~l~s~~~-------------------------------------------------d 135 (416)
T 2pm9_A 110 SNHSS-----SVKTVKFNAKQDNVLASGGN-------------------------------------------------N 135 (416)
T ss_dssp CCSSS-----CCCEEEECSSSTTBEEEECS-------------------------------------------------S
T ss_pred cCCcc-----ceEEEEEcCCCCCEEEEEcC-------------------------------------------------C
Confidence 32222 4678899999 776665422 1
Q ss_pred cEEEEEcc-CCC------cc-cc---CCc-cceeccccCCCC-ceEEEEecccCccccccccCccccEEEEecCCceeEE
Q 004456 157 AQLVLGSL-DGT------AK-DF---GTP-AVYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (752)
Q Consensus 157 ~~i~~~~~-~G~------~~-~l---~~~-~~~~~~~~SpDG-k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 223 (752)
+.|+++++ +++ .. .+ ..+ ..+..++|+||| +.|+....+ +.+.+||+.+++...
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-------------NFASIWDLKAKKEVI 202 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-------------SCEEEEETTTTEEEE
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-------------CCEEEEECCCCCcce
Confidence 46788888 333 11 11 223 678899999995 555544333 379999998876544
Q ss_pred ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEe-ecccce
Q 004456 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILH-KLDLRF 301 (752)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~-~~~~~~ 301 (752)
........ ......+..++|+|+|.. ++++...++. ...|.++|+. .+.. ...+. .....+
T Consensus 203 ~~~~~~~~------~~~~~~v~~~~~~~~~~~-~l~~~~~d~~--------~~~i~~~d~~--~~~~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 203 HLSYTSPN------SGIKQQLSVVEWHPKNST-RVATATGSDN--------DPSILIWDLR--NANTPLQTLNQGHQKGI 265 (416)
T ss_dssp EECCCCCS------SCCCCCEEEEEECSSCTT-EEEEEECCSS--------SCCCCEEETT--STTSCSBCCCSCCSSCE
T ss_pred EEeccccc------cccCCceEEEEECCCCCC-EEEEEECCCC--------CceEEEEeCC--CCCCCcEEeecCccCce
Confidence 33332110 001123678999999976 4444322211 1167788873 2222 33344 456678
Q ss_pred eeeeeec-CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCC-CeEEEee
Q 004456 302 RSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG-TNVIAKI 371 (752)
Q Consensus 302 ~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg-~~l~~~~ 371 (752)
..++|+| |++.|+... ....|.++++.++ +.......... ....++|+||| +.|+...
T Consensus 266 ~~~~~s~~~~~~l~s~~----~dg~v~~wd~~~~--~~~~~~~~~~~------~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSG----RDNTVLLWNPESA--EQLSQFPARGN------WCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp EEEEECSSCSSCEEEEE----SSSEEEEECSSSC--CEEEEEECSSS------CCCCEEECTTCTTEEEECC
T ss_pred eEEEeCCCCCCeEEEEe----CCCCEEEeeCCCC--ccceeecCCCC------ceEEEEECCCCCCEEEEEe
Confidence 8999999 888888776 3346888998874 22222221111 12237899999 6666554
No 204
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.64 E-value=8.7e-14 Score=143.07 Aligned_cols=282 Identities=7% Similarity=0.019 Sum_probs=172.1
Q ss_pred eeceeEecCCC-CeEEEeeccccccccccCcceEEEEEcccCcc------eeccCCCCccccccccceEEecCCcEEEEE
Q 004456 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (752)
Q Consensus 32 ~~~~~~~SPDG-~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~------~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (752)
.+...+|+|++ +.|+-. +....|.++++.+... +.+..+.. .+..+.|+|||++|+..
T Consensus 19 ~V~~l~~~~~~~~~l~s~----------s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSA----------SRDKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSA 83 (319)
T ss_dssp CEEEEEECSSCTTEEEEE----------ETTSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEE
T ss_pred eEEEEEccCCCccEEEEe----------cCCccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEE
Confidence 47889999987 555554 2335677777654322 22322222 46788999999988876
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccc
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVE 181 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~ 181 (752)
+.+ +.|.+||+ +|+ ...+..+ ..+..++
T Consensus 84 s~D-------------------------------------------------~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 84 SWD-------------------------------------------------KTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp ETT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred eCC-------------------------------------------------CEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 431 58999999 674 4445445 7889999
Q ss_pred cCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCC------c
Q 004456 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP------S 255 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~------~ 255 (752)
|+|+|+.|+..+.+. .+.+||+.+.....+..... .+..+.|+|+++ .
T Consensus 115 ~~~~~~~l~s~s~D~-------------~i~vwd~~~~~~~~~~~h~~-------------~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 115 IDKKASMIISGSRDK-------------TIKVWTIKGQCLATLLGHND-------------WVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ECTTSCEEEEEETTS-------------CEEEEETTSCEEEEECCCSS-------------CEEEEEECCC------CCE
T ss_pred EcCCCCEEEEEeCCC-------------eEEEEECCCCeEEEEeccCC-------------cEEEEEEccCCCCCCCccE
Confidence 999999998877664 79999998776655543322 255678888543 2
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
|+... ..+.+.+||+ .... ...+......+..++|+|||+.|+.+. ....|.++|+.++
T Consensus 169 -l~s~~------------~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~----~dg~i~iwd~~~~ 228 (319)
T 3frx_A 169 -IISAG------------NDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAG----KDGEIMLWNLAAK 228 (319)
T ss_dssp -EEEEE------------TTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEE----TTCEEEEEETTTT
T ss_pred -EEEEe------------CCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCC
Confidence 33332 3447888888 3322 223445566788999999999988876 3346888888774
Q ss_pred CccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeecc
Q 004456 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (752)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (752)
+....... .. ....++|+|||.+|+..... .+.+|++.++.........
T Consensus 229 --~~~~~~~~--~~-----~v~~~~~sp~~~~la~~~~~----------------------~i~v~~~~~~~~~~~~~~~ 277 (319)
T 3frx_A 229 --KAMYTLSA--QD-----EVFSLAFSPNRYWLAAATAT----------------------GIKVFSLDPQYLVDDLRPE 277 (319)
T ss_dssp --EEEEEEEC--CS-----CEEEEEECSSSSEEEEEETT----------------------EEEEEEETTEEEEEEECCC
T ss_pred --cEEEEecC--CC-----cEEEEEEcCCCCEEEEEcCC----------------------CcEEEEeCcCeeeeccCcc
Confidence 22211111 11 11237799999988876521 3667777655432222111
Q ss_pred chhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 415 REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
..... .........++|||||+.|+....+ ..|++||+.+
T Consensus 278 ~~~~~---~~~~~~v~~~~~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 278 FAGYS---KAAEPHAVSLAWSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp CTTCC---GGGCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred ccccc---cCcCcceeEEEECCCCCEEEEeecC----ceEEEEEEee
Confidence 10000 0000011136899999998765433 3477787554
No 205
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.64 E-value=8.6e-14 Score=144.11 Aligned_cols=277 Identities=11% Similarity=0.043 Sum_probs=168.8
Q ss_pred cCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 59 ~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
.....|+++|+++++..+......... .+..+.|||||+.|+++..
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~-------------------------------- 53 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAGP--TPMVPMVAPGGRIAYATVN-------------------------------- 53 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCTT--CCCCEEECTTSSEEEEEET--------------------------------
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCCC--CccceEEcCCCCEEEEEeC--------------------------------
Confidence 345789999999887655433222100 1457899999998887632
Q ss_pred hhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCCcc------ceeccccCCCCceEEEEecccCccccccccC---c
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCAR---F 207 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~~~------~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~---~ 207 (752)
....|+++|+ +|+.. .+.... ....++|||||++|++........ ... .
T Consensus 54 ----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----~~~~~~~ 113 (337)
T 1pby_B 54 ----------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE----LTHFEVQ 113 (337)
T ss_dssp ----------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC----SSCEEEC
T ss_pred ----------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc----ccccccc
Confidence 1157999998 66443 333222 567899999999999885321000 000 1
Q ss_pred cccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC
Q 004456 208 SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE 287 (752)
Q Consensus 208 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (752)
...|++||+.+++......... .+..+.|+|||+. |++.+ +.++++|+ .
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~-------------~~~~~~~s~dg~~-l~~~~--------------~~i~~~d~---~ 162 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPR-------------QITMLAWARDGSK-LYGLG--------------RDLHVMDP---E 162 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCS-------------SCCCEEECTTSSC-EEEES--------------SSEEEEET---T
T ss_pred CceEEEEECCCCcEEEEEeCCC-------------CcceeEECCCCCE-EEEeC--------------CeEEEEEC---C
Confidence 2589999998876544332221 1557899999998 66661 25888888 4
Q ss_pred CCCCeEEeecccceeeeeeecCCceEEEeeecccC--------------------ceeEEEEcCCCCCccceeccccccc
Q 004456 288 GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS--------------------QTRTWLVCPGSKDVAPRVLFDRVFE 347 (752)
Q Consensus 288 ~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~--------------------~~~l~~~~~~~~~~~~~~l~~~~~~ 347 (752)
+++...............|+|||+.+++....... ...|+++++.++ +...+.-....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~ 240 (337)
T 1pby_B 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG--EMAMREVRIMD 240 (337)
T ss_dssp TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC--CEEEEEEEECS
T ss_pred CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC--CceEeecCCCC
Confidence 44433333222212345899999988765422110 115889998874 22221111110
Q ss_pred cccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeec
Q 004456 348 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (752)
Q Consensus 348 ~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (752)
. ..-.++|+|||++|++.. . .|++||+.+++.........
T Consensus 241 ~-----~~~~~~~s~dg~~l~~~~-~----------------------~v~~~d~~~~~~~~~~~~~~------------ 280 (337)
T 1pby_B 241 V-----FYFSTAVNPAKTRAFGAY-N----------------------VLESFDLEKNASIKRVPLPH------------ 280 (337)
T ss_dssp S-----CEEEEEECTTSSEEEEEE-S----------------------EEEEEETTTTEEEEEEECSS------------
T ss_pred C-----ceeeEEECCCCCEEEEeC-C----------------------eEEEEECCCCcCcceecCCC------------
Confidence 0 111267999999887762 1 49999999887654433221
Q ss_pred CCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 428 ~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
....++|+|||++|++.. ....|+++|+.+++...
T Consensus 281 ~~~~~~~s~dg~~l~~~~----~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 281 SYYSVNVSTDGSTVWLGG----ALGDLAAYDAETLEKKG 315 (337)
T ss_dssp CCCEEEECTTSCEEEEES----BSSEEEEEETTTCCEEE
T ss_pred ceeeEEECCCCCEEEEEc----CCCcEEEEECcCCcEEE
Confidence 122358999999887652 24679999998877554
No 206
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.64 E-value=2.2e-13 Score=153.51 Aligned_cols=219 Identities=10% Similarity=0.066 Sum_probs=140.9
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcce---eccCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK---PLFESP 81 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~---~lt~~~ 81 (752)
..|.++++.. +...+.+++.. ..+...+|||||++||-.+ ....|.|+|+++++.. .+..+.
T Consensus 39 ~~v~l~~~~~---~~~~~~~~~h~--~~v~~~~~spdg~~lasg~----------~d~~v~lWd~~~~~~~~~~~~~~~~ 103 (611)
T 1nr0_A 39 TSVYTVPVGS---LTDTEIYTEHS--HQTTVAKTSPSGYYCASGD----------VHGNVRIWDTTQTTHILKTTIPVFS 103 (611)
T ss_dssp TEEEEEETTC---SSCCEEECCCS--SCEEEEEECTTSSEEEEEE----------TTSEEEEEESSSTTCCEEEEEECSS
T ss_pred CEEEEecCCC---cccCeEecCCC--CceEEEEECCCCcEEEEEe----------CCCCEEEeECCCCcceeeEeecccC
Confidence 3567777754 13334444333 2588899999999999863 3467888898765432 222122
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
. .+..++|||||+.|+..+.... ....|++
T Consensus 104 ~-----~v~~v~fs~dg~~l~~~~~~~~---------------------------------------------~~~~v~~ 133 (611)
T 1nr0_A 104 G-----PVKDISWDSESKRIAAVGEGRE---------------------------------------------RFGHVFL 133 (611)
T ss_dssp S-----CEEEEEECTTSCEEEEEECCSS---------------------------------------------CSEEEEE
T ss_pred C-----ceEEEEECCCCCEEEEEECCCC---------------------------------------------ceeEEEE
Confidence 1 4678999999999987643211 1147888
Q ss_pred EccCCCccccCCc-cceeccccCCCCce-EEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccC
Q 004456 162 GSLDGTAKDFGTP-AVYTAVEPSPDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYN 238 (752)
Q Consensus 162 ~~~~G~~~~l~~~-~~~~~~~~SpDGk~-l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~ 238 (752)
++.......+..+ ..+..++|+|||+. |+..+.+ ..+.+||....+... +...
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D-------------~~v~lwd~~~~~~~~~l~~H----------- 189 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD-------------NTVAIFEGPPFKFKSTFGEH----------- 189 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT-------------SCEEEEETTTBEEEEEECCC-----------
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCC-------------CeEEEEECCCCeEeeeeccc-----------
Confidence 8853344445555 78899999999986 5544444 379999987664433 2222
Q ss_pred CccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCe-EEe-------ecccceeeeeeecCC
Q 004456 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH-------KLDLRFRSVSWCDDS 310 (752)
Q Consensus 239 ~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l~-------~~~~~~~~~~~spDg 310 (752)
...+..++|+|||+. |+..+ ..+.+.+|++ ..++.. .+. .....+..++|||||
T Consensus 190 --~~~V~~v~fspdg~~-las~s------------~D~~i~lwd~---~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 190 --TKFVHSVRYNPDGSL-FASTG------------GDGTIVLYNG---VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp --SSCEEEEEECTTSSE-EEEEE------------TTSCEEEEET---TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred --cCceEEEEECCCCCE-EEEEE------------CCCcEEEEEC---CCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 123778999999996 55443 3346888887 333322 232 245568899999999
Q ss_pred ceEEEeeecccCceeEEEEcCCCC
Q 004456 311 LALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 311 ~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+.|+..+ ....|.++++.++
T Consensus 252 ~~l~s~s----~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 252 TKIASAS----ADKTIKIWNVATL 271 (611)
T ss_dssp SEEEEEE----TTSEEEEEETTTT
T ss_pred CEEEEEe----CCCeEEEEeCCCC
Confidence 9998876 2335777777653
No 207
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.63 E-value=1.6e-15 Score=160.04 Aligned_cols=228 Identities=13% Similarity=0.020 Sum_probs=146.4
Q ss_pred CCCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc
Q 004456 478 ASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (752)
Q Consensus 478 ~~~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (752)
+...++.+++.+. .+..+.+++|+|+++. .+++|+|+++||+++.. .......+..|+++|+
T Consensus 164 p~G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~~--------------~~~~~~~~~~l~~~g~ 226 (403)
T 3c8d_A 164 PEIPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQ--------------SMPVWPVLTSLTHRQQ 226 (403)
T ss_dssp CSSCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHH--------------TSCCHHHHHHHHHTTS
T ss_pred CCCceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHhh--------------cCcHHHHHHHHHHcCC
Confidence 3456788888765 5678999999998753 23599999999953211 0112235667888887
Q ss_pred E----EEecCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004456 557 A----VLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (752)
Q Consensus 557 ~----v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~ 629 (752)
. |+.+++.+..+...... ...+...+. .+++.++.++. ..|+++++|+|+||||++|+.++.++|+.|++
T Consensus 227 ~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~---~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~ 303 (403)
T 3c8d_A 227 LPPAVYVLIDAIDTTHRAHELPCNADFWLAVQ---QELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGC 303 (403)
T ss_dssp SCSCEEEEECCCSHHHHHHHSSSCHHHHHHHH---HTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCE
T ss_pred CCCeEEEEECCCCCccccccCCChHHHHHHHH---HHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcE
Confidence 4 77755432111111111 111222222 35667776653 35788999999999999999999999999999
Q ss_pred EEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 004456 630 GIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 709 (752)
Q Consensus 630 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~ 709 (752)
+++++|........ -. ... + ....+.. . ......+|++++||+.|..+ ..++++++++|++.|.+++
T Consensus 304 ~~~~sg~~~~~~~~--~~-~~~--~-~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~ 370 (403)
T 3c8d_A 304 VLSQSGSYWWPHRG--GQ-QEG--V-LLEKLKA-G---EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIF 370 (403)
T ss_dssp EEEESCCTTTTCTT--SS-SCC--H-HHHHHHT-T---SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEE
T ss_pred EEEeccccccCCCC--CC-cHH--H-HHHHHHh-c---cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEE
Confidence 99999976422110 00 000 0 0111111 0 12334688999999988653 6789999999999999999
Q ss_pred EEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 710 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 710 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+.++++ +|.+. .+...+...+.||.+.+.
T Consensus 371 ~~~~~G-gH~~~---~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 371 WRQVDG-GHDAL---CWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp EEEESC-CSCHH---HHHHHHHHHHHHHHGGGT
T ss_pred EEEeCC-CCCHH---HHHHHHHHHHHHHhcccc
Confidence 999999 59742 345667778888877653
No 208
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.63 E-value=8.9e-15 Score=148.30 Aligned_cols=213 Identities=16% Similarity=0.136 Sum_probs=134.2
Q ss_pred CCC-cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCC
Q 004456 490 KDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (752)
Q Consensus 490 ~~g-~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (752)
.+| ..++....- .++.|.||++||.+... .+...|. .....|++. |.|++ .+.+|
T Consensus 20 ~~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~--------~~~~~w~----~~~~~L~~~-~~via---~Dl~G 75 (291)
T 2wue_A 20 VDGPLKLHYHEAG--------VGNDQTVVLLHGGGPGA--------ASWTNFS----RNIAVLARH-FHVLA---VDQPG 75 (291)
T ss_dssp SSSEEEEEEEEEC--------TTCSSEEEEECCCCTTC--------CHHHHTT----TTHHHHTTT-SEEEE---ECCTT
T ss_pred eCCcEEEEEEecC--------CCCCCcEEEECCCCCcc--------chHHHHH----HHHHHHHhc-CEEEE---ECCCC
Confidence 477 777766542 12246899999953100 0001121 234556554 99999 56678
Q ss_pred CCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--CCc
Q 004456 569 EGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LTP 643 (752)
Q Consensus 569 ~g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~--~~~ 643 (752)
+|.+.... .......+|+.+.++.+ + .+++.|+||||||.+|+.+|.++|++++++|++++..... ...
T Consensus 76 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~ 149 (291)
T 2wue_A 76 YGHSDKRAEHGQFNRYAAMALKGLFDQL---G---LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAP 149 (291)
T ss_dssp STTSCCCSCCSSHHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSC
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHh---C---CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCcccccc
Confidence 88775432 23455666666666555 2 3689999999999999999999999999999998754211 000
Q ss_pred --c-C------c---c---------------ccccch------h---hhHHH---HHh-----cC-----hh--hhcCCC
Q 004456 644 --F-G------F---Q---------------TEFRTL------W---EATNV---YIE-----MS-----PI--THANKI 672 (752)
Q Consensus 644 --~-~------~---~---------------~~~~~~------~---~~~~~---~~~-----~~-----~~--~~~~~~ 672 (752)
. . . . ...... + ..+.. +.. .. .. ..+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 229 (291)
T 2wue_A 150 DPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRL 229 (291)
T ss_dssp SSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGC
T ss_pred ccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhC
Confidence 0 0 0 0 000000 0 00000 000 00 11 345678
Q ss_pred CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 673 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 673 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++|+|+++|++|..+| +..++.+.+.+ ...++++++++||... .+.++.+.+.+.+||.+
T Consensus 230 ~~P~lvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 230 RQPVLLIWGREDRVNP--LDGALVALKTI----PRAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp CSCEEEEEETTCSSSC--GGGGHHHHHHS----TTEEEEEESSCCSCHH-HHTHHHHHHHHHHHTTC
T ss_pred CCCeEEEecCCCCCCC--HHHHHHHHHHC----CCCeEEEeCCCCCChh-hhCHHHHHHHHHHHHhc
Confidence 9999999999999998 77777666554 3468999999999765 45677888888898853
No 209
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.63 E-value=1.9e-13 Score=139.49 Aligned_cols=243 Identities=11% Similarity=0.118 Sum_probs=157.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||..+ ....|.++++++++..+....... .+....|+||++.|+..+.+
T Consensus 15 ~V~~~~fsp~~~~l~s~~----------~dg~v~lWd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~s~s~d---- 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL----------YSGRVELWNYETQVEVRSIQVTET----PVRAGKFIARKNWIIVGSDD---- 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCSS----CEEEEEEEGGGTEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEc----------CCCcEEEEECCCCceeEEeeccCC----cEEEEEEeCCCCEEEEECCC----
Confidence 488899999999998863 346888889988765433222211 36678999999998876431
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
..|.++++ +|+ ...+..+ ..+..++|+|||++
T Consensus 77 ---------------------------------------------~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 77 ---------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp ---------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 57889998 664 4445445 78899999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCc-eeEE-ecCCCCCCCCCcccCCccccccceeeeeC-CCceEEEEEeccC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE-LCDLPPAEDIPVCYNSVREGMRSISWRAD-KPSTLYWVEAQDR 265 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspD-G~~~l~~~~~~~~ 265 (752)
|+..+.+. .+.+||+.++ .... +.... ..+..++|+|+ ++. |+..+
T Consensus 112 l~sgs~D~-------------~v~lWd~~~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~~-l~sgs---- 160 (304)
T 2ynn_A 112 VLSGSDDL-------------TVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPST-FASGC---- 160 (304)
T ss_dssp EEEEETTS-------------CEEEEEGGGTTEEEEEECCCC-------------SCEEEEEECTTCTTE-EEEEE----
T ss_pred EEEECCCC-------------eEEEEECCCCcchhhhhcccC-------------CcEEEEEECCCCCCE-EEEEe----
Confidence 98776653 7999998765 3322 22221 22668999995 553 44443
Q ss_pred CCCccccCccceEEeccCCCCCCCCCeEEee-cccceeeeeeec--CCceEEEeeecccCceeEEEEcCCCCCccceecc
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 342 (752)
..+.+.+||+. .+.....+.. ....+..+.|+| |++.|+.++ ....|.++|+.++ +.....
T Consensus 161 --------~D~~v~iwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s----~D~~i~iWd~~~~--~~~~~~ 224 (304)
T 2ynn_A 161 --------LDRTVKVWSLG--QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS----DDLTIKIWDYQTK--SCVATL 224 (304)
T ss_dssp --------TTSEEEEEETT--CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE----TTSEEEEEETTTT--EEEEEE
T ss_pred --------CCCeEEEEECC--CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc----CCCeEEEEeCCCC--ccceee
Confidence 33478888883 2223333432 234566777876 677777766 3346888888774 222222
Q ss_pred ccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 343 ~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
...... .-.++|+|++++|+..+.+ | .|.+||+.+++.....
T Consensus 225 ~~h~~~------v~~~~~~p~~~~l~s~s~D-------------g--------~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 225 EGHMSN------VSFAVFHPTLPIIISGSED-------------G--------TLKIWNSSTYKVEKTL 266 (304)
T ss_dssp ECCSSC------EEEEEECSSSSEEEEEETT-------------S--------CEEEEETTTCCEEEEE
T ss_pred CCCCCC------EEEEEECCCCCEEEEEcCC-------------C--------eEEEEECCCCceeeec
Confidence 211111 1126699999988877632 1 4899999988765544
No 210
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.63 E-value=4e-15 Score=151.35 Aligned_cols=218 Identities=14% Similarity=0.133 Sum_probs=133.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|.++..... + . .|.||++||.+.... ....|. .....|++ +|.|++ .+.+|+
T Consensus 23 ~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~~--------~~~~~~----~~~~~L~~-~~~vi~---~Dl~G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----K--GQPVILIHGGGAGAE--------SEGNWR----NVIPILAR-HYRVIA---MDMLGF 76 (296)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCSTTCC--------HHHHHT----TTHHHHTT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCcc--------hHHHHH----HHHHHHhh-cCEEEE---ECCCCC
Confidence 36777765543 1 1 367999999631100 001111 23445554 499999 566788
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-----
Q 004456 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----- 642 (752)
Q Consensus 570 g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~----- 642 (752)
|.+... ........+|+.+.++.+ . + .+++.|+||||||.+|+.++.++|++++++|++++.......
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 151 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 151 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHH
Confidence 777522 123445555555554433 2 2 168999999999999999999999999999999875421000
Q ss_pred c-cCcc----------------ccccc------hhhh------HHHHHh-----------cChhhhcCCCCCCEEEEEeC
Q 004456 643 P-FGFQ----------------TEFRT------LWEA------TNVYIE-----------MSPITHANKIKKPILIIHGE 682 (752)
Q Consensus 643 ~-~~~~----------------~~~~~------~~~~------~~~~~~-----------~~~~~~~~~~~~P~li~~G~ 682 (752)
. ..+. ..... .+.. ...+.. ......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp ----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 0 0000 00000 0000 000000 01123457789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCC
Q 004456 683 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 745 (752)
Q Consensus 683 ~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 745 (752)
+|..+| +..++++.+.+ ...++++++++||... .+.++.+.+.+.+||.++++..+
T Consensus 232 ~D~~~~--~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 287 (296)
T 1j1i_A 232 DDKVVP--VETAYKFLDLI----DDSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVDITP 287 (296)
T ss_dssp TCSSSC--HHHHHHHHHHC----TTEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC-----
T ss_pred CCcccC--HHHHHHHHHHC----CCCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCCcCc
Confidence 999998 88877776654 3468999999999865 46688899999999999986654
No 211
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.63 E-value=1.4e-13 Score=148.20 Aligned_cols=301 Identities=6% Similarity=-0.026 Sum_probs=185.2
Q ss_pred eceeE---ecCCCCeEEEeecccccc------ccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEE
Q 004456 33 INFVS---WSPDGKRIAFSVRVDEED------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIF 103 (752)
Q Consensus 33 ~~~~~---~SPDG~~ia~~~~~~~~~------~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~ 103 (752)
....+ |+|+++.++.++...... ...++...||+++.+++..+.+...... ..+..+.|+|+ ..+++
T Consensus 63 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~-~~~~~ 138 (433)
T 3bws_A 63 LVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFIDN-TRLAI 138 (433)
T ss_dssp EEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESSS-SEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeCC-CeEEE
Confidence 44445 999998887765421110 1112234888888776643333211111 12457899994 45665
Q ss_pred EecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccC------Cc-c
Q 004456 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFG------TP-A 175 (752)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~------~~-~ 175 (752)
+.. ....|+++|+ +|+..+.. .+ .
T Consensus 139 ~~~------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 139 PLL------------------------------------------------EDEGMDVLDINSGQTVRLSPPEKYKKKLG 170 (433)
T ss_dssp EBT------------------------------------------------TSSSEEEEETTTCCEEEECCCHHHHTTCC
T ss_pred EeC------------------------------------------------CCCeEEEEECCCCeEeeecCcccccccCC
Confidence 522 1146899999 56544432 22 4
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeeeCCC
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 254 (752)
.+..++|+|||+.++....+ ..+.+||+++++... +.... ..+..++|+|||+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-------------~~v~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 224 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-------------NAVHVFDLKTLAYKATVDLTG-------------KWSKILLYDPIRD 224 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-------------TEEEEEETTTCCEEEEEECSS-------------SSEEEEEEETTTT
T ss_pred ceeEEEEcCCCEEEEEECCC-------------CEEEEEECCCceEEEEEcCCC-------------CCeeEEEEcCCCC
Confidence 67789999999877665443 379999998765433 32111 1256789999999
Q ss_pred ceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeeccc----CceeEEEEc
Q 004456 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTWLVC 330 (752)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~----~~~~l~~~~ 330 (752)
. ++++.. ..+.|+++|+ .++...........+..++|+|||+.|++...... ....|++++
T Consensus 225 ~-l~~~~~-----------~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 225 L-VYCSNW-----------ISEDISVIDR---KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp E-EEEEET-----------TTTEEEEEET---TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred E-EEEEec-----------CCCcEEEEEC---CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 7 655531 2347899998 44444333444556788999999999888764332 245799999
Q ss_pred CCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 331 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
+.++ +......... . .-.++|+|||+++++... ....|++||+.+++....
T Consensus 290 ~~~~--~~~~~~~~~~-~------~~~~~~~~~g~~l~~~~~--------------------~~~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 290 MDKE--KLIDTIGPPG-N------KRHIVSGNTENKIYVSDM--------------------CCSKIEVYDLKEKKVQKS 340 (433)
T ss_dssp TTTT--EEEEEEEEEE-C------EEEEEECSSTTEEEEEET--------------------TTTEEEEEETTTTEEEEE
T ss_pred CCCC--cEEeeccCCC-C------cceEEECCCCCEEEEEec--------------------CCCEEEEEECCCCcEEEE
Confidence 9874 2222221111 0 012679999998877752 122699999998876554
Q ss_pred eeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCC-----------CcEEEEEECCCCCeeEe
Q 004456 411 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE-----------ITQYHILSWPLKKSSQI 467 (752)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~-----------~~~i~~~d~~~g~~~~l 467 (752)
...... +. .++|+|||+.+++....... ...|+++|+.+++....
T Consensus 341 ~~~~~~-----~~-------~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 341 IPVFDK-----PN-------TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EECSSS-----EE-------EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ecCCCC-----CC-------eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 432211 22 35899999988877654332 24899999888775543
No 212
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.63 E-value=3.2e-15 Score=149.94 Aligned_cols=197 Identities=17% Similarity=0.166 Sum_probs=127.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc------hhHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND------RFVEQLVSSA 586 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~------~~~~~~~~d~ 586 (752)
.|.||++||.+.. ...|. .+...|+ .+|.|++ .+.+|+|.+.... .......+|+
T Consensus 20 ~~~vvllHG~~~~-----------~~~w~----~~~~~L~-~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 20 KASIMFAPGFGCD-----------QSVWN----AVAPAFE-EDHRVIL---FDYVGSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp SSEEEEECCTTCC-----------GGGGT----TTGGGGT-TTSEEEE---CCCSCCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred CCcEEEEcCCCCc-----------hhhHH----HHHHHHH-hcCeEEE---ECCCCCCCCCCCcccccccccHHHHHHHH
Confidence 3789999996421 12222 2233344 4799999 6677888775421 1345566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc----cCcccc-----------cc
Q 004456 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP----FGFQTE-----------FR 651 (752)
Q Consensus 587 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~----~~~~~~-----------~~ 651 (752)
.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++........ ..+... ..
T Consensus 81 ~~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 81 LDVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 6665544 23689999999999999999999999999999998752210000 000000 00
Q ss_pred chh---------------hhHH----HHHh---------------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 652 TLW---------------EATN----VYIE---------------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 652 ~~~---------------~~~~----~~~~---------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
..| ...+ .+.. .+....+.++++|+|+++|++|..+| ...++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~ 232 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYM 232 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHH
Confidence 000 0000 0000 11122456789999999999999998 7777666
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
.+.+. ..++++++++||... .+.++.+.+.+.+||.+++
T Consensus 233 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 233 HQHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhcC
Confidence 65442 468999999999765 5668889999999998763
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.63 E-value=6.8e-14 Score=163.85 Aligned_cols=242 Identities=12% Similarity=0.119 Sum_probs=163.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-eeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.+...+|||||++||... ..+.|.++++.+++. +.+..+.. .+..+.|+|||+.|++.+.+
T Consensus 15 ~v~~i~~sp~~~~la~~~----------~~g~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~d--- 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL----------YSGRVEIWNYETQVEVRSIQVTET-----PVRAGKFIARKNWIIVGSDD--- 76 (814)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCSS-----CEEEEEEEGGGTEEEEEETT---
T ss_pred ceEEEEECCCCCEEEEEe----------CCCEEEEEECCCCceEEEEecCCC-----cEEEEEEeCCCCEEEEEeCC---
Confidence 588899999999999963 346899999888764 34432322 46789999999999987431
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk 187 (752)
+.|.++++ +|+ ...+..+ ..+..++|||||+
T Consensus 77 ----------------------------------------------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 110 (814)
T 3mkq_A 77 ----------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP 110 (814)
T ss_dssp ----------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred ----------------------------------------------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC
Confidence 67899998 664 4445544 7889999999999
Q ss_pred eEEEEecccCccccccccCccccEEEEecCCc-ee-EEecCCCCCCCCCcccCCccccccceeeee-CCCceEEEEEecc
Q 004456 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LV-RELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (752)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~ 264 (752)
+|+..+.+ +.+.+|++.++ .. ..+.... ..+..+.|+| ||+. |+...
T Consensus 111 ~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~~-l~~~~--- 160 (814)
T 3mkq_A 111 YVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPST-FASGC--- 160 (814)
T ss_dssp EEEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEEE-EEEEE---
T ss_pred EEEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCCE-EEEEe---
Confidence 99877655 37899998765 33 2333222 2266899999 7775 55543
Q ss_pred CCCCccccCccceEEeccCCCCCCCCCeEEeecc-cceeeeeeec--CCceEEEeeecccCceeEEEEcCCCCCccceec
Q 004456 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (752)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 341 (752)
..+.|.++++. .+.....+.... ..+..++|+| |++.|+.+. ....|.++++.++ .....
T Consensus 161 ---------~dg~v~vwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~--~~~~~ 223 (814)
T 3mkq_A 161 ---------LDRTVKVWSLG--QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS----DDLTIKIWDYQTK--SCVAT 223 (814)
T ss_dssp ---------TTSEEEEEETT--CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC----TTSEEEEEETTTT--EEEEE
T ss_pred ---------CCCeEEEEECC--CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe----CCCEEEEEECCCC--cEEEE
Confidence 33478888883 223334444333 6678899999 899888876 3346888888774 22222
Q ss_pred cccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEe
Q 004456 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 342 ~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
...... ....++|+|+|++|+....+ | .|.+||+.+++.....
T Consensus 224 ~~~~~~------~v~~~~~~~~~~~l~~~~~d-------------g--------~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 224 LEGHMS------NVSFAVFHPTLPIIISGSED-------------G--------TLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EECCSS------CEEEEEECSSSSEEEEEETT-------------S--------CEEEEETTTCSEEEEE
T ss_pred EcCCCC------CEEEEEEcCCCCEEEEEeCC-------------C--------eEEEEECCCCcEEEEe
Confidence 211111 11126799999988877632 1 4888898887665443
No 214
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.63 E-value=1.3e-13 Score=143.41 Aligned_cols=290 Identities=13% Similarity=0.037 Sum_probs=173.1
Q ss_pred eeceeEe-----cC-CCCeEEEeeccccccccccCcceEEEEEcccCcc--------eeccCCCCccccccccceEEecC
Q 004456 32 KINFVSW-----SP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--------KPLFESPDICLNAVFGSFVWVNN 97 (752)
Q Consensus 32 ~~~~~~~-----SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~--------~~lt~~~~~~~~~~~~~~~wspd 97 (752)
.+....| +| ||+.||..+ ....|.++++..++. +.+..+.. .+..+.|+||
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs----------~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGS----------RDKTVMIWKLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEE----------TTSCEEEEEECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhheeeEEEeecCCCCCEEEEEc----------CCCEEEEEECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 4777888 77 999998764 335677777765431 22322222 4678899999
Q ss_pred CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-
Q 004456 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP- 174 (752)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~- 174 (752)
++.|+..+.+ +.|.+||+ +|+ ...+..+
T Consensus 88 ~~~l~s~s~D-------------------------------------------------~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSSWD-------------------------------------------------KTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEETT-------------------------------------------------SEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCC-------------------------------------------------CcEEEEECCCCcEEEEEcCCC
Confidence 9988765321 57899998 664 3445445
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 254 (752)
..+..++|||||++|+..+.+. .+.+||+.+.....+.... .....+..+.|+|+++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~-------------~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAER-------------EIKLWNILGECKFSSAEKE----------NHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-------------CEEEEESSSCEEEECCTTT----------SCSSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-------------EEEEEeccCCceeeeeccc----------CCCceeeeeeeccccc
Confidence 7889999999999998776553 7999999865443332211 1112356788999884
Q ss_pred ---------ceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCcee
Q 004456 255 ---------STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (752)
Q Consensus 255 ---------~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 325 (752)
..++... ..+.|.+||. .......+......+..++|+|||+.|+.++ ....
T Consensus 176 ~~~~~~~~~~~l~s~~------------~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs----~dg~ 236 (343)
T 2xzm_R 176 SANKVQPFAPYFASVG------------WDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGG----KDKK 236 (343)
T ss_dssp SCSCCCSSCCEEEEEE------------TTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEE----TTCE
T ss_pred cccccCCCCCEEEEEc------------CCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEc----CCCe
Confidence 2133332 3447888886 3333334455566788999999999998876 3345
Q ss_pred EEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCC
Q 004456 326 TWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 405 (752)
Q Consensus 326 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g 405 (752)
|.++|+... .......... . ....++|+|++++|+... + + .|.+||+.++
T Consensus 237 v~iwd~~~~-~~~~~~~~~~-~------~v~~v~~sp~~~~la~~~-d-------------~--------~v~iw~~~~~ 286 (343)
T 2xzm_R 237 LLIWDILNL-TYPQREFDAG-S------TINQIAFNPKLQWVAVGT-D-------------Q--------GVKIFNLMTQ 286 (343)
T ss_dssp EEEEESSCC-SSCSEEEECS-S------CEEEEEECSSSCEEEEEE-S-------------S--------CEEEEESSSC
T ss_pred EEEEECCCC-cccceeecCC-C------cEEEEEECCCCCEEEEEC-C-------------C--------CEEEEEeCCC
Confidence 888887432 1212111111 0 111267999998776543 1 1 3788888776
Q ss_pred ceeEEeeccchhh--hhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 406 SKERIWESNREKY--FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 406 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
+...+..-..... .............++|+|||+.|+.... ...|++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~----Dg~v~~w~~~~ 340 (343)
T 2xzm_R 287 SKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT----DGVIRTFSFET 340 (343)
T ss_dssp CSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET----TSEEEEEEEEE
T ss_pred CCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC----CceEEEEEEEc
Confidence 5433211110000 0000000111223689999998866532 23577777654
No 215
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.63 E-value=7.7e-15 Score=148.06 Aligned_cols=211 Identities=12% Similarity=0.096 Sum_probs=134.0
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|..++.... + . .|.||++||.+... ..+..+ ......| +.+|.|++ .+.+|+|
T Consensus 13 ~g~~l~y~~~---G-----~--g~~vvllHG~~~~~-----------~~~~~w-~~~~~~L-~~~~~vi~---~Dl~G~G 66 (282)
T 1iup_A 13 AGVLTNYHDV---G-----E--GQPVILIHGSGPGV-----------SAYANW-RLTIPAL-SKFYRVIA---PDMVGFG 66 (282)
T ss_dssp TTEEEEEEEE---C-----C--SSEEEEECCCCTTC-----------CHHHHH-TTTHHHH-TTTSEEEE---ECCTTST
T ss_pred CCEEEEEEec---C-----C--CCeEEEECCCCCCc-----------cHHHHH-HHHHHhh-ccCCEEEE---ECCCCCC
Confidence 6767766543 1 1 36799999953110 101010 1223344 67999999 5667888
Q ss_pred CCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc----
Q 004456 571 DKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---- 643 (752)
Q Consensus 571 ~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~---- 643 (752)
.+.... .......+|+.+.++.+ ..+++.|+||||||.+|+.+|.++|++++++|++++........
T Consensus 67 ~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 140 (282)
T 1iup_A 67 FTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN 140 (282)
T ss_dssp TSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHH
Confidence 775432 23455566666666544 23689999999999999999999999999999998754211000
Q ss_pred --cCc----------------cccccch-h-hh----------HHHHHhc-------------ChhhhcCCCCCCEEEEE
Q 004456 644 --FGF----------------QTEFRTL-W-EA----------TNVYIEM-------------SPITHANKIKKPILIIH 680 (752)
Q Consensus 644 --~~~----------------~~~~~~~-~-~~----------~~~~~~~-------------~~~~~~~~~~~P~li~~ 680 (752)
+.+ ....... + .. ...+... .....+.++++|+|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 220 (282)
T 1iup_A 141 AVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIH 220 (282)
T ss_dssp HHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred HHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEe
Confidence 000 0000000 0 00 0000000 00134677899999999
Q ss_pred eCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 681 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 681 G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
|++|..+| +..++++.+.+ ...++++++++||... .+.++.+.+.+.+||.+.
T Consensus 221 G~~D~~~p--~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 221 GREDQVVP--LSSSLRLGELI----DRAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp ETTCSSSC--HHHHHHHHHHC----TTEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred cCCCCCCC--HHHHHHHHHhC----CCCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhcC
Confidence 99999998 88877776654 3468999999999865 566888999999999864
No 216
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.63 E-value=6.2e-15 Score=152.44 Aligned_cols=215 Identities=19% Similarity=0.202 Sum_probs=134.6
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+....+- ..|.||++||.+.. ... +......|+++||.|++ .+.+|+
T Consensus 18 ~~g~~l~y~~~G----------~g~~vvllHG~~~~-----------~~~----w~~~~~~L~~~g~~via---~Dl~G~ 69 (328)
T 2cjp_A 18 VNGLNMHLAELG----------EGPTILFIHGFPEL-----------WYS----WRHQMVYLAERGYRAVA---PDLRGY 69 (328)
T ss_dssp ETTEEEEEEEEC----------SSSEEEEECCTTCC-----------GGG----GHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred CCCcEEEEEEcC----------CCCEEEEECCCCCc-----------hHH----HHHHHHHHHHCCcEEEE---ECCCCC
Confidence 467777766542 13789999996421 011 12345677788999999 666788
Q ss_pred CCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC--
Q 004456 570 GDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-- 641 (752)
Q Consensus 570 g~~~~~------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~-- 641 (752)
|.+..+ ........+|+.+.++.+.. +.+++.|+||||||.+|+.+|.++|++++++|++++......
T Consensus 70 G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~ 145 (328)
T 2cjp_A 70 GDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPK 145 (328)
T ss_dssp TTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSS
T ss_pred CCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCccccc
Confidence 877543 12356677888888777631 246899999999999999999999999999999875432100
Q ss_pred -Ccc-------C-------ccccc--------------------------------------------cchhh---hHHH
Q 004456 642 -TPF-------G-------FQTEF--------------------------------------------RTLWE---ATNV 659 (752)
Q Consensus 642 -~~~-------~-------~~~~~--------------------------------------------~~~~~---~~~~ 659 (752)
... . +.... ...|. ....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (328)
T 2cjp_A 146 MNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDY 225 (328)
T ss_dssp CCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHH
T ss_pred CChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHH
Confidence 000 0 00000 00000 0000
Q ss_pred HH----------------hcC----h--hhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHH--HHHHhCCCcE-EEEEeC
Q 004456 660 YI----------------EMS----P--ITHANKIKKPILIIHGEVDDKVGLFPMQAERFF--DALKGHGALS-RLVLLP 714 (752)
Q Consensus 660 ~~----------------~~~----~--~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~--~~l~~~~~~~-~~~~~~ 714 (752)
+. ... . ...+.++++|+|+++|++|..+| +..+++.. +.+.+.-... ++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~i~ 303 (328)
T 2cjp_A 226 YANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYH--IPGAKEYIHNGGFKKDVPLLEEVVVLE 303 (328)
T ss_dssp HHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGG--STTHHHHHHHSHHHHHSTTBCCCEEET
T ss_pred HHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCccccc--CcchhhhhhhhhHHHHhcCCeeEEEcC
Confidence 00 000 0 00246788999999999999987 54322222 2333322345 789999
Q ss_pred CCCccCCccccHHHHHHHHHHHHHH
Q 004456 715 FEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 715 ~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++||... .+.++.+.+.+.+||.+
T Consensus 304 ~~gH~~~-~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 304 GAAHFVS-QERPHEISKHIYDFIQK 327 (328)
T ss_dssp TCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred CCCCCcc-hhCHHHHHHHHHHHHHh
Confidence 9999865 55688899999999864
No 217
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.63 E-value=8.7e-15 Score=150.50 Aligned_cols=216 Identities=19% Similarity=0.181 Sum_probs=128.9
Q ss_pred EEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCC
Q 004456 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (752)
Q Consensus 484 ~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 563 (752)
...+...+|..+.....-++. .|.||++||++... . ...+...+...+|.|++
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~~--------g~~vvllHG~~~~~-------------~---~~~~~~~~~~~~~~vi~--- 68 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGG-------------I---SPHHRQLFDPERYKVLL--- 68 (317)
T ss_dssp EEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCC-------------C---CGGGGGGSCTTTEEEEE---
T ss_pred eeEEEcCCCcEEEEEEcCCCC--------CCcEEEECCCCCcc-------------c---chhhhhhccccCCeEEE---
Confidence 334555577777766553321 36689999964210 0 00111223357999999
Q ss_pred CCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004456 564 IPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (752)
Q Consensus 564 ~~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~ 639 (752)
.+.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|++++++|++++....
T Consensus 69 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 142 (317)
T 1wm1_A 69 FDQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 142 (317)
T ss_dssp ECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred ECCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCc
Confidence 5667888774321 23445556655555443 2368999999999999999999999999999998764321
Q ss_pred C-------------CCcc-------Cccc-cc-------------c---------chh-------------------hhH
Q 004456 640 T-------------LTPF-------GFQT-EF-------------R---------TLW-------------------EAT 657 (752)
Q Consensus 640 ~-------------~~~~-------~~~~-~~-------------~---------~~~-------------------~~~ 657 (752)
. ..+. .... .. . ..| ...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (317)
T 1wm1_A 143 KQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGED 222 (317)
T ss_dssp HHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCH
T ss_pred hhhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCccccccccc
Confidence 0 0000 0000 00 0 000 000
Q ss_pred H----------HHHh-------cC-hhhhcCCCC-CCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCc
Q 004456 658 N----------VYIE-------MS-PITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 718 (752)
Q Consensus 658 ~----------~~~~-------~~-~~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 718 (752)
. .+.. .. ....+.+++ +|+|+++|++|..+| +..++.+.+.+. ..++++++++||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~--~~~~~~l~~~~p----~~~~~~i~~~gH 296 (317)
T 1wm1_A 223 DFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQ--VQNAWDLAKAWP----EAELHIVEGAGH 296 (317)
T ss_dssp HHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSC--HHHHHHHHHHCT----TSEEEEETTCCS
T ss_pred chhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCC--HHHHHHHHhhCC----CceEEEECCCCC
Confidence 0 0000 00 122344564 999999999999998 888877776653 358999999999
Q ss_pred cCCccccHHHHHHHHHHHHH
Q 004456 719 VYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 719 ~~~~~~~~~~~~~~~~~fl~ 738 (752)
.....+....+...+.+|+.
T Consensus 297 ~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 297 SYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp STTSHHHHHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHHhc
Confidence 76432334556666666654
No 218
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.63 E-value=7.8e-15 Score=153.52 Aligned_cols=118 Identities=16% Similarity=0.137 Sum_probs=84.8
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+++...-|++ ...|.||++||.+... ..| ..++..|+++||.|++ .+.+|+
T Consensus 10 ~~g~~l~y~~~G~~~------~~~~~vv~~hG~~~~~-----------~~~----~~~~~~l~~~g~~vi~---~d~~g~ 65 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD------QQGPLVVLLHGFPESW-----------YSW----RHQIPALAGAGYRVVA---IDQRGY 65 (356)
T ss_dssp ETTEEEEEEEECCTT------CCSCEEEEECCTTCCG-----------GGG----TTTHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEEecCCC------CCCCEEEEECCCCCcH-----------HHH----HHHHHHHHHcCCEEEE---EcCCCC
Confidence 478888888876642 1258999999964211 112 2356678889999999 455677
Q ss_pred CCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 570 GDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 570 g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
|.+.... .......+|+.++++.+ +.++++|+||||||.+++.++.++|++++++|++++..
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 7664432 23445566666666554 34689999999999999999999999999999988654
No 219
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.63 E-value=1.8e-15 Score=142.97 Aligned_cols=183 Identities=13% Similarity=-0.026 Sum_probs=114.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH-HHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~ 591 (752)
.|.||++||.+... . . .+.... ..|+++||.|++++.+ .. ..+ ......+++.+.++
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~-~~~~~~~~~l~~~g~~v~~~d~~---~~---~~~--~~~~~~~~~~~~~~ 61 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--N-HWFPWLKKRLLADGVQADILNMP---NP---LQP--RLEDWLDTLSLYQH 61 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--S-TTHHHHHHHHHHTTCEEEEECCS---CT---TSC--CHHHHHHHHHTTGG
T ss_pred CCEEEEEcCCCCCc-----------c--h-hHHHHHHHHHHhCCcEEEEecCC---CC---CCC--CHHHHHHHHHHHHH
Confidence 48899999964211 1 0 111233 3577899999996654 11 111 23333444443333
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhc
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA 669 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (752)
.+ .++++++||||||.+++.++.++|+ +++++|+++|....... +.. . ..+.. .......+
T Consensus 62 ~~-------~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~~-~-~~~~~-----~~~~~~~~ 124 (192)
T 1uxo_A 62 TL-------HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQM-L-DEFTQ-----GSFDHQKI 124 (192)
T ss_dssp GC-------CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CGG-G-GGGTC-----SCCCHHHH
T ss_pred hc-------cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---chh-h-hhhhh-----cCCCHHHH
Confidence 22 3689999999999999999999999 99999999986542110 000 0 00000 00001223
Q ss_pred CCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 670 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 670 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
.++++|+|+++|++|..+| +..++.+.+.+ ..+++++++++|.+.... .. .+..+.+||.+.+..
T Consensus 125 ~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~-~~-~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDEG-FT-SLPIVYDVLTSYFSK 189 (192)
T ss_dssp HHHEEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGGT-CS-CCHHHHHHHHHHHHC
T ss_pred HhhcCCEEEEecCCCCcCC--HHHHHHHHHhc-----CceEEEeCCCcCcccccc-cc-cHHHHHHHHHHHHHH
Confidence 4456899999999999999 88888887766 348999999999875322 21 123356666666643
No 220
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.63 E-value=8.8e-15 Score=146.02 Aligned_cols=196 Identities=8% Similarity=0.009 Sum_probs=125.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...| ..+...|+++||.|++ .+.+|+|.+.... .......+|+.+.
T Consensus 10 g~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCLG-----------AWIW----YKLKPLLESAGHKVTA---VDLSAAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCccc-----------cchH----HHHHHHHHhCCCEEEE---eecCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 6889999996311 1112 2356678889999999 6677888774421 2355666666666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC-CCCc------c-------Cccc-------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK-TLTP------F-------GFQT------- 648 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~-~~~~------~-------~~~~------- 648 (752)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++.... .... . .+..
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 5544 21 258999999999999999999999999999998864210 0000 0 0000
Q ss_pred ---c-----ccch-h-----------hhHHHHHh-cCh--h--------hhc--C-CCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 649 ---E-----FRTL-W-----------EATNVYIE-MSP--I--------THA--N-KIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 649 ---~-----~~~~-~-----------~~~~~~~~-~~~--~--------~~~--~-~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
. .... + ........ ..+ . ... . ..++|+|+++|++|..+| +..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 0 0000 0 00000000 000 0 000 0 135899999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+.+.+.+. ..++++++++||... .+.++.+.+.+.+|+.
T Consensus 225 ~~~~~~~p----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVG----ADKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCC----CceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 77777664 348999999999865 5668888888998874
No 221
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.63 E-value=3e-15 Score=148.63 Aligned_cols=196 Identities=12% Similarity=0.035 Sum_probs=124.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~~~ 591 (752)
.|.||++||.+.. ...| ..+...|++. |.|++ .+.+|+|.+.... .......+|+.+.++
T Consensus 16 ~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~-~~via---~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFGS-----------LDNL----GVLARDLVND-HNIIQ---VDVRNHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTCC-----------TTTT----HHHHHHHTTT-SCEEE---ECCTTSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCccc-----------HhHH----HHHHHHHHhh-CcEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 4789999996421 1112 2344555554 99999 5667787775432 234566677777776
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-c-------------Ccccc--------
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F-------------GFQTE-------- 649 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-~-------------~~~~~-------- 649 (752)
.+ + .+++.|+||||||.+|+.++.++|++++++|++++........ . .....
T Consensus 77 ~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL---Q---IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH---T---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc---C---CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 65 2 3689999999999999999999999999999875321100000 0 00000
Q ss_pred -ccchhhhHHHH----------------H----hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 004456 650 -FRTLWEATNVY----------------I----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 708 (752)
Q Consensus 650 -~~~~~~~~~~~----------------~----~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~ 708 (752)
..........+ . .......+.++++|+|+++|++|..++ +..++.+.+.+ ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~----~~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQF----PQA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHC----TTE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHC----CCC
Confidence 00000000000 0 000001245788999999999999988 77766665543 347
Q ss_pred EEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 709 RLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 709 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
++++++++||... .+.++.+.+.+.+||.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 9999999999865 556788899999999764
No 222
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.63 E-value=1.4e-13 Score=146.98 Aligned_cols=274 Identities=9% Similarity=0.068 Sum_probs=175.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+....|+|||+.|+..+ ....|.++++++++..+....... .+..+.|+|||+.|+..+.+
T Consensus 110 ~V~~~~~~p~~~~l~s~s----------~Dg~i~vwd~~~~~~~~~l~~h~~----~V~~v~~~~~~~~l~sgs~D---- 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSAS----------EDATIKVWDYETGDFERTLKGHTD----SVQDISFDHSGKLLASCSAD---- 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEE----------SSSCEEEEETTTCCCCEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCcEEEEEeccCC----cEEEEEEcCCCCEEEEEeCC----
Confidence 478899999999998863 346899999988875443322211 46788999999988766431
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.|.+||+ +++. ..+..+ ..+..+.|+|||++
T Consensus 172 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 172 ---------------------------------------------MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ---------------------------------------------SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 46777788 4443 344444 78889999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|+..+.+. .+.+||+.++... .+.... ..+..+.|+|||+. |+..+
T Consensus 207 l~s~s~D~-------------~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~-l~s~s------ 253 (410)
T 1vyh_C 207 IVSASRDK-------------TIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTL-IASCS------ 253 (410)
T ss_dssp EEEEETTS-------------EEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE------
T ss_pred EEEEeCCC-------------eEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCE-EEEEc------
Confidence 98776553 7999999876543 333221 22667899999995 44443
Q ss_pred CccccCccceEEeccCCCCCCCC-CeEEeecccceeeeeeecC--------------------CceEEEeeecccCceeE
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDD--------------------SLALVNETWYKTSQTRT 326 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spD--------------------g~~l~~~~~~~~~~~~l 326 (752)
..+.+.+||+ .++. ...+......+..++|+|+ |..|+.++ ....|
T Consensus 254 ------~D~~v~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----~D~~i 320 (410)
T 1vyh_C 254 ------NDQTVRVWVV---ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----RDKTI 320 (410)
T ss_dssp ------TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE----TTSEE
T ss_pred ------CCCeEEEEEC---CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe----CCCeE
Confidence 2346888887 3333 3334455667888999997 44565554 33468
Q ss_pred EEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc
Q 004456 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (752)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (752)
.++|+.++ ............ .-.++|+|+|++|+..+.++ .|.+||+.+++
T Consensus 321 ~iwd~~~~--~~~~~~~~h~~~------v~~v~~~~~g~~l~s~s~D~---------------------~i~vwd~~~~~ 371 (410)
T 1vyh_C 321 KMWDVSTG--MCLMTLVGHDNW------VRGVLFHSGGKFILSCADDK---------------------TLRVWDYKNKR 371 (410)
T ss_dssp EEEETTTT--EEEEEEECCSSC------EEEEEECSSSSCEEEEETTT---------------------EEEEECCTTSC
T ss_pred EEEECCCC--ceEEEEECCCCc------EEEEEEcCCCCEEEEEeCCC---------------------eEEEEECCCCc
Confidence 88888774 222211111111 11267999999998776321 58899998876
Q ss_pred eeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
.......... .+.. ++|+|++..|+.... ...|.+|+
T Consensus 372 ~~~~~~~h~~----~v~~-------l~~~~~~~~l~sgs~----D~~i~vW~ 408 (410)
T 1vyh_C 372 CMKTLNAHEH----FVTS-------LDFHKTAPYVVTGSV----DQTVKVWE 408 (410)
T ss_dssp CCEEEECCSS----CEEE-------EEECSSSSCEEEEET----TSEEEEEC
T ss_pred eEEEEcCCCC----cEEE-------EEEcCCCCEEEEEeC----CCcEEEEe
Confidence 5443332211 1333 488999998765432 23466665
No 223
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.63 E-value=2.4e-15 Score=153.03 Aligned_cols=210 Identities=16% Similarity=0.095 Sum_probs=134.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|..+....+-+++ .|+||++||.+... ..|. .....| ++||.|++ .+.+|+|
T Consensus 18 ~g~~l~~~~~g~~~--------~~~vl~lHG~~~~~-----------~~~~----~~~~~l-~~~~~v~~---~d~~G~G 70 (299)
T 3g9x_A 18 LGERMHYVDVGPRD--------GTPVLFLHGNPTSS-----------YLWR----NIIPHV-APSHRCIA---PDLIGMG 70 (299)
T ss_dssp TTEEEEEEEESCSS--------SCCEEEECCTTCCG-----------GGGT----TTHHHH-TTTSCEEE---ECCTTST
T ss_pred CCeEEEEEecCCCC--------CCEEEEECCCCccH-----------HHHH----HHHHHH-ccCCEEEe---eCCCCCC
Confidence 67788877764432 47899999964221 1222 234455 56999999 5566777
Q ss_pred CCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-cC--
Q 004456 571 DKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG-- 645 (752)
Q Consensus 571 ~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-~~-- 645 (752)
.+.... .......+|+.++++.+ +.++++|+||||||.+++.++.++|++++++|++++........ +.
T Consensus 71 ~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 144 (299)
T 3g9x_A 71 KSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEF 144 (299)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGG
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchH
Confidence 664432 34556666666666554 34689999999999999999999999999999998543311000 00
Q ss_pred c-------ccc-----------------------ccchhhhHHH-----------------HHhc--------------C
Q 004456 646 F-------QTE-----------------------FRTLWEATNV-----------------YIEM--------------S 664 (752)
Q Consensus 646 ~-------~~~-----------------------~~~~~~~~~~-----------------~~~~--------------~ 664 (752)
. ... .......... +... +
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp GHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhh
Confidence 0 000 0000000000 0000 0
Q ss_pred hhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 665 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 665 ~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
....+.++++|+|+++|++|..+| +..++.+.+.+ ..+++++++++||... .+.++.+.+.+.+|+.+.
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESL----PNCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHS----TTEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGGG
T ss_pred hhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhC----CCCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhhh
Confidence 112245678999999999999998 88887777665 3468999999999865 556777777777776654
No 224
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.63 E-value=2.7e-13 Score=141.63 Aligned_cols=268 Identities=10% Similarity=0.088 Sum_probs=166.9
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+....|||||++||..+ ....|.+++..+++.......... .+..+.|+|||+.|+..+.+
T Consensus 66 ~V~~~~~s~d~~~l~s~s----------~Dg~v~vWd~~~~~~~~~~~~~~~----~v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSS----------QDGKVIVWDSFTTNKEHAVTMPCT----WVMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSEEEEEETTTCCEEEEEECSSS----CCCEEEECTTSSEEEEESTT----
T ss_pred eEEEEEECCCCCEEEEEe----------CCCeEEEEECCCCCcceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 588999999999998863 346888889877765433222211 36688999999998876321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccC-C----C---ccccCCc-cceecccc
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G----T---AKDFGTP-AVYTAVEP 182 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~-G----~---~~~l~~~-~~~~~~~~ 182 (752)
..+.++++. + . ...+..+ ..+..+.|
T Consensus 128 ---------------------------------------------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 128 ---------------------------------------------NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ---------------------------------------------SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred ---------------------------------------------CCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 345555551 1 1 1112223 66789999
Q ss_pred CCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeee--CCCceEEE
Q 004456 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYW 259 (752)
Q Consensus 183 SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wsp--DG~~~l~~ 259 (752)
+||++.|+..+.+. .+.+||+.+++... +.... ..+..+.|+| +|+. |+.
T Consensus 163 ~~~~~~l~t~s~D~-------------~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~g~~-l~s 215 (354)
T 2pbi_B 163 TNSDMQILTASGDG-------------TCALWDVESGQLLQSFHGHG-------------ADVLCLDLAPSETGNT-FVS 215 (354)
T ss_dssp CSSSSEEEEEETTS-------------EEEEEETTTCCEEEEEECCS-------------SCEEEEEECCCSSCCE-EEE
T ss_pred eCCCCEEEEEeCCC-------------cEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEeCCCCCE-EEE
Confidence 99999998876653 79999998775433 32221 1245567766 5664 444
Q ss_pred EEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccce
Q 004456 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (752)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (752)
.+ ..+.+.+||+. .+.....+......+..++|+|+++.|+..+. ...|.++|+... ...
T Consensus 216 gs------------~Dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~--~~~ 275 (354)
T 2pbi_B 216 GG------------CDKKAMVWDMR--SGQCVQAFETHESDVNSVRYYPSGDAFASGSD----DATCRLYDLRAD--REV 275 (354)
T ss_dssp EE------------TTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEE
T ss_pred Ee------------CCCeEEEEECC--CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEECCCC--cEE
Confidence 43 34478899983 22223334455667889999999998888762 234777887763 222
Q ss_pred eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhh
Q 004456 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 419 (752)
Q Consensus 340 ~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 419 (752)
......... .....++|+|+|++|+....+. .|.+||+.+++..........
T Consensus 276 ~~~~~~~~~----~~~~~~~~s~~g~~l~~g~~d~---------------------~i~vwd~~~~~~~~~l~~h~~--- 327 (354)
T 2pbi_B 276 AIYSKESII----FGASSVDFSLSGRLLFAGYNDY---------------------TINVWDVLKGSRVSILFGHEN--- 327 (354)
T ss_dssp EEECCTTCC----SCEEEEEECTTSSEEEEEETTS---------------------CEEEEETTTCSEEEEECCCSS---
T ss_pred EEEcCCCcc----cceeEEEEeCCCCEEEEEECCC---------------------cEEEEECCCCceEEEEECCCC---
Confidence 222111000 0112367999999888776321 489999988775443322211
Q ss_pred hceeeeecCCcceecccCCCEEEEEE
Q 004456 420 ETAVALVFGQGEEDINLNQLKILTSK 445 (752)
Q Consensus 420 ~~~~~~~~~~~~~~~s~d~~~l~~~~ 445 (752)
.+. .++|||||+.|+...
T Consensus 328 -~v~-------~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 328 -RVS-------TLRVSPDGTAFCSGS 345 (354)
T ss_dssp -CEE-------EEEECTTSSCEEEEE
T ss_pred -cEE-------EEEECCCCCEEEEEc
Confidence 122 358999999876543
No 225
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.62 E-value=2.6e-15 Score=150.42 Aligned_cols=195 Identities=15% Similarity=0.150 Sum_probs=124.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...|. .++..|++ .|.|++ .+.+|+|.+.... .......+|+.+.
T Consensus 16 g~~vvllHG~~~~-----------~~~~~----~~~~~L~~-~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~ 76 (269)
T 2xmz_A 16 NQVLVFLHGFLSD-----------SRTYH----NHIEKFTD-NYHVIT---IDLPGHGEDQSSMDETWNFDYITTLLDRI 76 (269)
T ss_dssp SEEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEE---ECCTTSTTCCCCTTSCCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCc-----------HHHHH----HHHHHHhh-cCeEEE---ecCCCCCCCCCCCCCccCHHHHHHHHHHH
Confidence 3569999996421 12222 34556655 499999 5667888775442 2455666666666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc------------------C------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF------------------G------ 645 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~------------------~------ 645 (752)
++.+ ..+++.|+||||||.+|+.+|.++|++++++|++++......... .
T Consensus 77 l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (269)
T 2xmz_A 77 LDKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVN 150 (269)
T ss_dssp HGGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHH
Confidence 5553 236899999999999999999999999999999987543211000 0
Q ss_pred -cccc--cc-----ch------hh-----hHH----HHHh------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHH
Q 004456 646 -FQTE--FR-----TL------WE-----ATN----VYIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 696 (752)
Q Consensus 646 -~~~~--~~-----~~------~~-----~~~----~~~~------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 696 (752)
+... .. .. +. ... .+.. .+....+.++++|+|+++|++|..+| .... +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~ 227 (269)
T 2xmz_A 151 DWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-K 227 (269)
T ss_dssp HHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-H
T ss_pred HHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-H
Confidence 0000 00 00 00 000 0000 01122456788999999999999886 5543 3
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 697 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
+.+.+ ...++++++++||... .+.++.+.+.+.+||.+.
T Consensus 228 ~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 228 MANLI----PNSKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHHS----TTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HHhhC----CCcEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 43332 4579999999999876 456788999999999864
No 226
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.62 E-value=1.4e-13 Score=143.75 Aligned_cols=257 Identities=10% Similarity=-0.033 Sum_probs=160.4
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~ 85 (752)
.|+++++.. ++...... .+.....+.|||||++++++. .....|+++++++++............
T Consensus 70 ~v~~~d~~~----~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~~~ 134 (353)
T 3vgz_A 70 VVYRLDPVT----LEVTQAIH--NDLKPFGATINNTTQTLWFGN---------TVNSAVTAIDAKTGEVKGRLVLDDRKR 134 (353)
T ss_dssp EEEEECTTT----CCEEEEEE--ESSCCCSEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEEESCCCCC
T ss_pred cEEEEcCCC----CeEEEEEe--cCCCcceEEECCCCCEEEEEe---------cCCCEEEEEeCCCCeeEEEEecCCCcc
Confidence 477777765 65544432 233477899999999887754 234689999999888644332221000
Q ss_pred -----cccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 86 -----NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 86 -----~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
......+.|+|||+.|++.... ....|+
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------------------~~~~i~ 167 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIG-----------------------------------------------KESVIW 167 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEES-----------------------------------------------SSCEEE
T ss_pred ccccCCCCCceEEECCCCCEEEEEecC-----------------------------------------------CCceEE
Confidence 0013568999999988876321 115799
Q ss_pred EEcc-CCCccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCccc
Q 004456 161 LGSL-DGTAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (752)
Q Consensus 161 ~~~~-~G~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (752)
++|+ +++...... . .....+.|||||++|++.... ..+++||+.+++...........
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~------ 228 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD-------------GELITIDTADNKILSRKKLLDDG------ 228 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT-------------SEEEEEETTTTEEEEEEECCCSS------
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC-------------CeEEEEECCCCeEEEEEEcCCCC------
Confidence 9999 664443333 3 457889999999999887543 37899999887665433221110
Q ss_pred CCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEee
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 317 (752)
....+..++|+|||+. |++... ..+.++++|. .+++......... ...++|+|||+.++++.
T Consensus 229 --~~~~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 229 --KEHFFINISLDTARQR-AFITDS-----------KAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp --SCCCEEEEEEETTTTE-EEEEES-----------SSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEE
T ss_pred --CCcccceEEECCCCCE-EEEEeC-----------CCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEE
Confidence 0112446899999997 666531 3357899998 4444433332222 35689999999877765
Q ss_pred ecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeee
Q 004456 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (752)
Q Consensus 318 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~ 373 (752)
.. ...|+++|+.++ +......... . .-.++|+|||++|++....
T Consensus 291 ~~---~~~v~~~d~~~~--~~~~~~~~~~-~------~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 291 RQ---AGKVSVIDAKSY--KVVKTFDTPT-H------PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TT---TTEEEEEETTTT--EEEEEEECCS-E------EEEEEECTTSCEEEEEEEC
T ss_pred CC---CCeEEEEECCCC--eEEEEEecCC-C------CCeEEEcCCCCEEEEEEcc
Confidence 22 246999998874 2222211110 0 0126799999988887643
No 227
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.62 E-value=6.5e-14 Score=150.96 Aligned_cols=304 Identities=9% Similarity=0.072 Sum_probs=176.9
Q ss_pred eeceeEecCC-CCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEec-CCcEEEEEecCCC
Q 004456 32 KINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPD-G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~ 109 (752)
++...+|+|+ ++.||.. ...+.|.|+++++++...+....++ ...+..+.|+| |++.|+..+.+
T Consensus 121 ~V~~l~~~P~~~~~lasG----------s~dg~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D-- 186 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVG----------SKGGDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSME-- 186 (435)
T ss_dssp CEEEEEECSSCTTCEEEE----------ETTSCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSS--
T ss_pred CEEEEEEeCCCCCEEEEE----------eCCCEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCC--
Confidence 5888999995 5667764 3346899999987765443322111 12477899998 67777655321
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCc----cceeccccCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPSP 184 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~----~~~~~~~~Sp 184 (752)
+.|.+||+.+ ....+... ..+..+.|+|
T Consensus 187 -----------------------------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 187 -----------------------------------------------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp -----------------------------------------------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred -----------------------------------------------CEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 5688888855 33333222 3466889999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEecc
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~ 264 (752)
||+.|+....+ +.|.+||+.++....+.... ..+..+.|+|+++. ++.+..
T Consensus 220 ~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~-~~~s~s-- 270 (435)
T 4e54_B 220 SSRMVVTGDNV-------------GNVILLNMDGKELWNLRMHK-------------KKVTHVALNPCCDW-FLATAS-- 270 (435)
T ss_dssp TTTEEEEECSS-------------SBEEEEESSSCBCCCSBCCS-------------SCEEEEEECTTCSS-EEEEEE--
T ss_pred CCCEEEEEeCC-------------CcEeeeccCcceeEEEeccc-------------ceEEeeeecCCCce-EEEEec--
Confidence 99999887555 37999999876544433222 23678999999997 554432
Q ss_pred CCCCccccCccceEEeccCCCCCCCCCeEE---eecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceec
Q 004456 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEIL---HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (752)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 341 (752)
..+.|.+||+.. ......+ ......+..++|||||+.|+.++ ....|.++++.++. ....+
T Consensus 271 ---------~d~~v~iwd~~~--~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~----~D~~i~iwd~~~~~-~~~~~ 334 (435)
T 4e54_B 271 ---------VDQTVKIWDLRQ--VRGKASFLYSLPHRHPVNAACFSPDGARLLTTD----QKSEIRVYSASQWD-CPLGL 334 (435)
T ss_dssp ---------TTSBCCEEETTT--CCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE----SSSCEEEEESSSSS-SEEEE
T ss_pred ---------CcceeeEEeccc--ccccceEEEeeeccccccceeECCCCCeeEEEc----CCCEEEEEECCCCc-cceEE
Confidence 223567777731 1222222 23455688899999999998876 23358888887642 22222
Q ss_pred cccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhc
Q 004456 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (752)
Q Consensus 342 ~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (752)
....... ..........|+|++..++...... ...+.+. ......|.+||..+|+.......... ..
T Consensus 335 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~------~~~~~~i~iwd~~~g~~~~~l~~~~~---~~ 401 (435)
T 4e54_B 335 IPHPHRH-FQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCT------PYELRTIDVFDGNSGKMMCQLYDPES---SG 401 (435)
T ss_dssp CCCCCCC-CSSSCCCBCEECSSSSCEEEECCCC---TTSCCSS------TTCCCCEEEECSSSCCEEEEECCSSC---CC
T ss_pred ecccccc-cccceeEEEEEcCCCCEEEEEEcCC---CCeEEEE------ecCCCEEEEEECCCCcEEEEEeCCCC---Cc
Confidence 2111110 0000111245899998887765331 1111111 01223588999998876543322111 01
Q ss_pred eeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 422 ~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
+.. ..+|||||..|+.. . -..|++|++.+|+.+
T Consensus 402 v~s------~~~fspdg~~lasg-~----d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 402 ISS------LNEFNPMGDTLASA-M----GYHILIWSQQEARTR 434 (435)
T ss_dssp CCC------EEEECTTSSCEEEE-C----SSEEEECCCC-----
T ss_pred EEE------EEEECCCCCEEEEE-c----CCcEEEEECCcCeee
Confidence 111 23689999987642 2 235999999888765
No 228
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.62 E-value=4.5e-13 Score=141.45 Aligned_cols=297 Identities=10% Similarity=0.026 Sum_probs=177.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||..+ ....|.++++.+++.......... .+..++|+|||+.|+..+.+
T Consensus 68 ~V~~~~~sp~~~~l~s~s----------~D~~v~iWd~~~~~~~~~~~~h~~----~v~~~~~s~~g~~las~~~d---- 129 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSAS----------QDGRLIVWNALTSQKTHAIKLHCP----WVMECAFAPNGQSVACGGLD---- 129 (380)
T ss_dssp CEEEEEECTTSSCEEEEE----------TTSEEEEEETTTTEEEEEEECCCT----TCCCCEECTTSSEEEECCSS----
T ss_pred EEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCccceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 588999999999998863 346899999888775443222211 36678999999998865321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccC------CC---ccccCCc-cceeccc
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD------GT---AKDFGTP-AVYTAVE 181 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~------G~---~~~l~~~-~~~~~~~ 181 (752)
+.+.++++. +. .+.+..+ +.+..+.
T Consensus 130 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 130 ---------------------------------------------SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ---------------------------------------------SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred ---------------------------------------------CcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 344555552 11 1223334 6778999
Q ss_pred cCCCCce-EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeee-CCCceEEE
Q 004456 182 PSPDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYW 259 (752)
Q Consensus 182 ~SpDGk~-l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~ 259 (752)
|+|++.. |+..+.+ ..+.+||+.+++.......... ......+..+.|+| +++. ++.
T Consensus 165 ~~~~~~~~l~s~s~D-------------~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~-l~s 223 (380)
T 3iz6_a 165 YVPDQETRLITGSGD-------------QTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINSLNANM-FIS 223 (380)
T ss_dssp CCSSSSSCEEEECTT-------------SCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECSSSCCE-EEE
T ss_pred EecCCCCEEEEECCC-------------CcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeecCCCCE-EEE
Confidence 9998655 5444333 3799999987765443322111 11122356778876 6664 443
Q ss_pred EEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccce
Q 004456 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (752)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (752)
.+ ..+.+.+||+.. .+.....+......+..++|+|||+.|+.++ ....|.++|+.++ ...
T Consensus 224 gs------------~D~~v~~wd~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s----~D~~i~lwd~~~~--~~~ 284 (380)
T 3iz6_a 224 GS------------CDTTVRLWDLRI-TSRAVRTYHGHEGDINSVKFFPDGQRFGTGS----DDGTCRLFDMRTG--HQL 284 (380)
T ss_dssp EE------------TTSCEEEEETTT-TCCCCEEECCCSSCCCEEEECTTSSEEEEEC----SSSCEEEEETTTT--EEE
T ss_pred EE------------CCCeEEEEECCC-CCcceEEECCcCCCeEEEEEecCCCeEEEEc----CCCeEEEEECCCC--cEE
Confidence 32 334788888731 1233445556667789999999999988876 2335888888774 222
Q ss_pred ecccccccccc-CCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhh
Q 004456 340 VLFDRVFENVY-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (752)
Q Consensus 340 ~l~~~~~~~~~-~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (752)
........... .....-.++|||+|++|+....+ ..|++||+.+++..........
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------------------g~i~vwd~~~~~~~~~~~~~~~-- 341 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---------------------GDCYVWDTLLAEMVLNLGTLQN-- 341 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---------------------SCEEEEETTTCCEEEEECCSCS--
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECC---------------------CCEEEEECCCCceEEEEecccC--
Confidence 22211110000 00012246799999988877522 1599999987765432211000
Q ss_pred hhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
........++|||||+.|+.... ...|.+|++.+.+
T Consensus 342 -----~h~~~v~~l~~s~dg~~l~sgs~----D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 342 -----SHEGRISCLGLSSDGSALCTGSW----DKNLKIWAFSGHR 377 (380)
T ss_dssp -----SCCCCCCEEEECSSSSEEEEECT----TSCEEEEECCSSS
T ss_pred -----CCCCceEEEEECCCCCEEEEeeC----CCCEEEEecCCCc
Confidence 01112234689999998765432 2348888876543
No 229
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.62 E-value=9.1e-15 Score=149.61 Aligned_cols=209 Identities=13% Similarity=0.030 Sum_probs=134.4
Q ss_pred cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCC
Q 004456 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 572 (752)
Q Consensus 493 ~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 572 (752)
.++++...-|++ +.|.||++||.+... ..| ......|+++||.|++ .|.+|+|.+
T Consensus 34 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~rvia---~Dl~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-------AEDVFLCLHGEPTWS-----------YLY----RKMIPVFAESGARVIA---PDFFGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-------CSCEEEECCCTTCCG-----------GGG----TTTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEeCCCC-------CCCEEEEECCCCCch-----------hhH----HHHHHHHHhCCCeEEE---eCCCCCCCC
Confidence 778777665421 037899999964211 112 2356678889999999 667788887
Q ss_pred CCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC--CC------
Q 004456 573 LPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--KT------ 640 (752)
Q Consensus 573 ~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~--~~------ 640 (752)
..+. .......+|+.+.++.+. .+++.|+||||||.+|+.+|.++|++++++|++++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERLD------LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHcC------CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 5432 235666777777777662 36899999999999999999999999999999887431 10
Q ss_pred ----CCccC---cc-----cc------------ccchhhhHHHHH----------------h--c-----------Chhh
Q 004456 641 ----LTPFG---FQ-----TE------------FRTLWEATNVYI----------------E--M-----------SPIT 667 (752)
Q Consensus 641 ----~~~~~---~~-----~~------------~~~~~~~~~~~~----------------~--~-----------~~~~ 667 (752)
..... +. .. ..........+. . . ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 00000 00 00 000000000000 0 0 0012
Q ss_pred hcC-CCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 668 HAN-KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 668 ~~~-~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
.+. ++++|+|+++|++|..+| ..++.+.+.+... ....++++++||... . .++.+.+.+.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~--~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING--CPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc--cceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 345 899999999999999875 4556666665433 222233499999876 4 788999999999975
No 230
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.62 E-value=3.5e-15 Score=154.43 Aligned_cols=204 Identities=13% Similarity=0.103 Sum_probs=129.6
Q ss_pred cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCC
Q 004456 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 572 (752)
Q Consensus 493 ~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 572 (752)
..+.+..+-+. .|.||++||.+... . .+...+...||.|++ .+.+|+|.+
T Consensus 70 ~~~~~~~~g~~---------~~~vv~~hG~~~~~-----------~-------~~~~~~~~lg~~Vi~---~D~~G~G~S 119 (330)
T 3p2m_A 70 GAISALRWGGS---------APRVIFLHGGGQNA-----------H-------TWDTVIVGLGEPALA---VDLPGHGHS 119 (330)
T ss_dssp TTEEEEEESSS---------CCSEEEECCTTCCG-----------G-------GGHHHHHHSCCCEEE---ECCTTSTTS
T ss_pred ceEEEEEeCCC---------CCeEEEECCCCCcc-----------c-------hHHHHHHHcCCeEEE---EcCCCCCCC
Confidence 35666665322 47899999964211 1 123334455999999 555677766
Q ss_pred CCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC---------C
Q 004456 573 LPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK---------T 640 (752)
Q Consensus 573 ~~~---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~---------~ 640 (752)
... ........+|+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++.... .
T Consensus 120 ~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 193 (330)
T 3p2m_A 120 AWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAE 193 (330)
T ss_dssp CCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhh
Confidence 522 223455566666666554 2468999999999999999999999999999999875220 0
Q ss_pred ---CCc-----cCccccc--------cchhhhHHHH----Hhc-----------------------ChhhhcCCCCCCEE
Q 004456 641 ---LTP-----FGFQTEF--------RTLWEATNVY----IEM-----------------------SPITHANKIKKPIL 677 (752)
Q Consensus 641 ---~~~-----~~~~~~~--------~~~~~~~~~~----~~~-----------------------~~~~~~~~~~~P~l 677 (752)
... ..+.... .........+ ... .....+.++++|+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 273 (330)
T 3p2m_A 194 QRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPIT 273 (330)
T ss_dssp -----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEE
T ss_pred hhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEE
Confidence 000 0000000 0000000000 000 00123456789999
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEE-EEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 678 IIHGEVDDKVGLFPMQAERFFDALKGHGALSR-LVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 678 i~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+++|++|.++| ...++++.+.+ ...+ +++++++||... .+.++.+.+.+.+||++
T Consensus 274 ii~G~~D~~v~--~~~~~~l~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 274 LVRGGSSGFVT--DQDTAELHRRA----THFRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEETTCCSSC--HHHHHHHHHHC----SSEEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEeCCCCCCC--HHHHHHHHHhC----CCCeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 99999999998 88887776655 3357 999999999865 56677888889998864
No 231
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.62 E-value=1.1e-13 Score=148.29 Aligned_cols=319 Identities=8% Similarity=-0.032 Sum_probs=186.6
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+++++.. ++..+.. ..........|+|||++||... ....|.++++++++..........
T Consensus 78 ~~v~i~d~~~----~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~h~~- 140 (420)
T 3vl1_A 78 GHDFLFNTII----RDGSKML--KRADYTAVDTAKLQMRRFILGT----------TEGDIKVLDSNFNLQREIDQAHVS- 140 (420)
T ss_dssp TEEEEEECCS----EETTTTS--CSCCEEEEEEECSSSCEEEEEE----------TTSCEEEECTTSCEEEEETTSSSS-
T ss_pred CcEEEEEecc----cceeeEE--ecCCceEEEEEecCCCEEEEEE----------CCCCEEEEeCCCcceeeecccccC-
Confidence 4567777655 3332222 2223455568999999999863 346789999998887665322221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
.+..+.|+||++.|+..+.+ +.|.++++
T Consensus 141 ---~v~~~~~~~~~~~l~s~s~d-------------------------------------------------~~i~iwd~ 168 (420)
T 3vl1_A 141 ---EITKLKFFPSGEALISSSQD-------------------------------------------------MQLKIWSV 168 (420)
T ss_dssp ---CEEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred ---ccEEEEECCCCCEEEEEeCC-------------------------------------------------CeEEEEeC
Confidence 46789999999988876321 57999999
Q ss_pred -CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCc------
Q 004456 165 -DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV------ 235 (752)
Q Consensus 165 -~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~------ 235 (752)
++ ....+..+ ..+..++|+|||+.|+..+.+. .+.+||+.+++.............+.
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-------------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG-------------TIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS-------------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC-------------cEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 66 44455545 7889999999999999776553 79999998776544332211100000
Q ss_pred ------ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEee-cccceeeeeee
Q 004456 236 ------CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHK-LDLRFRSVSWC 307 (752)
Q Consensus 236 ------~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~s 307 (752)
........+..+.|+|||+. |+... ..+.|.++|+ ..+. ...+.. ....+..++|+
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~------------~dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~ 299 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKY-VIAGH------------VSGVITVHNV---FSKEQTIQLPSKFTCSCNSLTVD 299 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEE------------TTSCEEEEET---TTCCEEEEECCTTSSCEEEEEEC
T ss_pred cCCcceeeecccCcccceEEcCCCCE-EEEEc------------CCCeEEEEEC---CCCceeEEcccccCCCceeEEEe
Confidence 00001233567899999996 55443 3447888888 3333 233322 34568899999
Q ss_pred cCCc-eEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccC
Q 004456 308 DDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (752)
Q Consensus 308 pDg~-~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (752)
|+++ .|+.+. ....|.++++.++......+....... ....++++|++|+..+.+
T Consensus 300 ~~~~~~l~~g~----~dg~i~vwd~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~l~s~~~d------------- 355 (420)
T 3vl1_A 300 GNNANYIYAGY----ENGMLAQWDLRSPECPVGEFLINEGTP-------INNVYFAAGALFVSSGFD------------- 355 (420)
T ss_dssp SSCTTEEEEEE----TTSEEEEEETTCTTSCSEEEEESTTSC-------EEEEEEETTEEEEEETTT-------------
T ss_pred CCCCCEEEEEe----CCCeEEEEEcCCCcCchhhhhccCCCC-------ceEEEeCCCCEEEEecCC-------------
Confidence 9999 565554 334688889887521112222111110 012256788877666522
Q ss_pred CCCCCCCCCeeEEEecCCCce-eEEeeccchhhhhceeeeecCCcceecccCCC---EEEEEEecCCCCcEEEEEECC
Q 004456 387 GFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQL---KILTSKESKTEITQYHILSWP 460 (752)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~---~l~~~~~~~~~~~~i~~~d~~ 460 (752)
..|.+||+.+++. +.+...... ............++|+||++ .++.+... ..+..|+++
T Consensus 356 --------~~v~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~----g~~~~~~~~ 418 (420)
T 3vl1_A 356 --------TSIKLDIISDPESERPAIEFETP---TFLVSNDDAVSQFCYVSDDESNGEVLEVGKN----NFCALYNLS 418 (420)
T ss_dssp --------EEEEEEEECCTTCCSCEECTTSC---EEECCSSCCCCEEEEECCSSSSCEEEEEETT----TEEEEEESC
T ss_pred --------ccEEEEeccCCCCCccceeccCc---cEEccCCcceEEEEEccCCCCcceEEEEcCC----ceEEEEecc
Confidence 1478888765322 222111111 00111112233468999999 77666432 235555543
No 232
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.62 E-value=1.3e-13 Score=143.20 Aligned_cols=286 Identities=9% Similarity=0.030 Sum_probs=158.9
Q ss_pred cceEEEEEcc-cCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchh
Q 004456 61 KLRVWIADAE-TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (752)
Q Consensus 61 ~~~l~v~~~~-~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (752)
...|++++++ +++.+.+..... ...+..++|+|||+.|++.....
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~------------------------------- 59 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPE------------------------------- 59 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEC---SSCCCCEEECTTSSEEEEEETTT-------------------------------
T ss_pred CCeEEEEEECCCCcEEEeeeEec---CCCCceEEECCCCCEEEEeecCC-------------------------------
Confidence 4678888875 444333321111 11356789999999988874310
Q ss_pred hccCChhhhhhhhhhcccEEEEEcc---CCCccccC---CccceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 140 NLLKDEYDESLFDYYTTAQLVLGSL---DGTAKDFG---TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~i~~~~~---~G~~~~l~---~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
..|.++++ +|+.+.+. .......++|||||++|++..... ..+.+
T Consensus 60 -----------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~i~~ 110 (343)
T 1ri6_A 60 -----------------FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------------GNVSV 110 (343)
T ss_dssp -----------------TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------------TEEEE
T ss_pred -----------------CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------------CeEEE
Confidence 24555444 34444332 224667889999999998886543 36888
Q ss_pred EecCCc---eeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC
Q 004456 214 WTTDGK---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK 290 (752)
Q Consensus 214 ~d~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (752)
|+++.+ ......... ..+..++|+|||+. |++... ..+.++++++. ..+.
T Consensus 111 ~d~~~~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~~--~~~~ 163 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGL-------------DGCHSANISPDNRT-LWVPAL-----------KQDRICLFTVS--DDGH 163 (343)
T ss_dssp EEEETTEEEEEEEEECCC-------------TTBCCCEECTTSSE-EEEEEG-----------GGTEEEEEEEC--TTSC
T ss_pred EECCCCccccccccccCC-------------CCceEEEECCCCCE-EEEecC-----------CCCEEEEEEec--CCCc
Confidence 888322 222222111 12567899999997 665541 23468888873 1133
Q ss_pred CeEE-----e-ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccc-cccccCCCCCC-ceeeCC
Q 004456 291 PEIL-----H-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSP-MMTRTS 362 (752)
Q Consensus 291 ~~~l-----~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~p-~~~~s~ 362 (752)
...+ . ........++|+|||+.+++..... ..|.+++++...++...+.... ..........+ .++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~---~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN---SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT---TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCC---CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 3322 1 1223566789999999887765222 3466666643212222111111 00000000111 367999
Q ss_pred CCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecC--CCceeEEeeccchhhhhceeeeecCCcceecccCCCE
Q 004456 363 TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN--TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLK 440 (752)
Q Consensus 363 dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~ 440 (752)
||++|++.... ...|.+||+. +++.+.+...... .....++|+|||+.
T Consensus 241 dg~~l~v~~~~--------------------~~~i~v~d~~~~~~~~~~~~~~~~~----------~~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 241 DGRHLYACDRT--------------------ASLITVFSVSEDGSVLSKEGFQPTE----------TQPRGFNVDHSGKY 290 (343)
T ss_dssp TSSEEEEEETT--------------------TTEEEEEEECTTSCCEEEEEEEECS----------SSCCCEEECTTSSE
T ss_pred CCCEEEEEecC--------------------CCEEEEEEEcCCCCceEEeeeecCC----------CccceEEECCCCCE
Confidence 99988776511 1258888886 5555544322111 11234689999998
Q ss_pred EEEEEecCCCCcEEEEEECCCCCeeEeecC
Q 004456 441 ILTSKESKTEITQYHILSWPLKKSSQITNF 470 (752)
Q Consensus 441 l~~~~~~~~~~~~i~~~d~~~g~~~~lt~~ 470 (752)
|++...... .-.+|.+|..+|+.+++...
T Consensus 291 l~~~~~~~~-~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 291 LIAAGQKSH-HISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEECTTTC-EEEEEEEETTTTEEEEEEEE
T ss_pred EEEecCCCC-eEEEEEEcCCCceeeEcccc
Confidence 877653322 33455567778877766644
No 233
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.62 E-value=1.6e-14 Score=146.32 Aligned_cols=173 Identities=16% Similarity=0.085 Sum_probs=112.1
Q ss_pred HHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004456 549 LIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (752)
Q Consensus 549 ~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~ 625 (752)
..|+ .+|.|++ .+.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|+
T Consensus 61 ~~l~-~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~ 130 (289)
T 1u2e_A 61 PLVE-AGYRVIL---LDCPGWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPE 130 (289)
T ss_dssp HHHH-TTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHh-cCCeEEE---EcCCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHH
Confidence 4455 4599999 5667787775432 23344455555544433 23689999999999999999999999
Q ss_pred ceeEEEEccCCCCCC--CCccC---c------------------------ccccc--c----hhh----hHHHHH----h
Q 004456 626 LFCCGIARSGSYNKT--LTPFG---F------------------------QTEFR--T----LWE----ATNVYI----E 662 (752)
Q Consensus 626 ~~~~~v~~~~~~~~~--~~~~~---~------------------------~~~~~--~----~~~----~~~~~~----~ 662 (752)
+++++|++++..... ..... . ..... . .+. .+..+. .
T Consensus 131 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (289)
T 1u2e_A 131 RVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKS 210 (289)
T ss_dssp GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHH
Confidence 999999988754210 00000 0 00000 0 000 000000 0
Q ss_pred --------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHH
Q 004456 663 --------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETD 734 (752)
Q Consensus 663 --------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 734 (752)
.+....+.++++|+|+++|++|..+| +..++++.+.+. ..++++++++||... .+.++.+.+.+.
T Consensus 211 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~ 283 (289)
T 1u2e_A 211 LEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLLSGIA----GSELHIFRDCGHWAQ-WEHADAFNQLVL 283 (289)
T ss_dssp HHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHST----TCEEEEESSCCSCHH-HHTHHHHHHHHH
T ss_pred HHhccccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHHhhCC----CcEEEEeCCCCCchh-hcCHHHHHHHHH
Confidence 01223456789999999999999998 888877776653 358999999999865 455777888888
Q ss_pred HHHH
Q 004456 735 RWLQ 738 (752)
Q Consensus 735 ~fl~ 738 (752)
+||.
T Consensus 284 ~fl~ 287 (289)
T 1u2e_A 284 NFLA 287 (289)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8885
No 234
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.62 E-value=2.4e-14 Score=146.88 Aligned_cols=120 Identities=13% Similarity=0.045 Sum_probs=79.7
Q ss_pred EEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCC
Q 004456 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (752)
Q Consensus 484 ~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 563 (752)
...+...+|..++...+-++. .|.||++||++... . .......+...||.|++
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~~--------g~pvvllHG~~~~~-------------~---~~~~~~~~~~~~~~vi~--- 65 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGGG-------------C---NDKMRRFHDPAKYRIVL--- 65 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTTC-------------C---CGGGGGGSCTTTEEEEE---
T ss_pred cceEEcCCCCEEEEEecCCCC--------CCeEEEECCCCCcc-------------c---cHHHHHhcCcCcceEEE---
Confidence 334555577788766554321 36689999964210 0 00111223357999999
Q ss_pred CCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 564 IPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 564 ~~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+.+|+|.+.... .......+|+.+.++.+ ..+++.|+||||||.+|+.++.++|++++++|++++.
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 66 FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp ECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ECCCCCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 6667888774421 23445566666555443 2358999999999999999999999999999998764
No 235
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.61 E-value=3.2e-14 Score=143.78 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=133.6
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEec
Q 004456 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (752)
Q Consensus 482 ~~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (752)
.+...+...+|.++++..+-+++ +.|.||++||.+... ..| ..++..|++ +|.|++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~-----------~~~----~~~~~~L~~-~~~vi~- 60 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRNA-----------RDF----EDLATRLAG-DWRVLC- 60 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCCG-----------GGG----HHHHHHHBB-TBCEEE-
T ss_pred cccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcch-----------hhH----HHHHHHhhc-CCEEEe-
Confidence 34566777788889888775432 147799999964210 111 234445554 999999
Q ss_pred CCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 562 PSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 562 ~~~~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
.+.+|+|.+.... .......+|+.+.++.+. .+++.|+||||||.+|+.+|.++|++++++|+.++..
T Consensus 61 --~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 132 (285)
T 3bwx_A 61 --PEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEG------IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP 132 (285)
T ss_dssp --ECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred --ecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhcC------CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc
Confidence 5667888775431 234566777777776652 3589999999999999999999999999999865321
Q ss_pred CCCC-------------Ccc-Cc---------------cccccchhhhHHH--HHh---------cCh-----h------
Q 004456 638 NKTL-------------TPF-GF---------------QTEFRTLWEATNV--YIE---------MSP-----I------ 666 (752)
Q Consensus 638 ~~~~-------------~~~-~~---------------~~~~~~~~~~~~~--~~~---------~~~-----~------ 666 (752)
.... ... .+ .......|..... +.. .++ +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 3bwx_A 133 EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGA 212 (285)
T ss_dssp SCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTC
T ss_pred ccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhc
Confidence 1000 000 00 0000000100000 000 000 0
Q ss_pred -------hhcCCC-CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 667 -------THANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 667 -------~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
..+.++ ++|+|+++|++|..+| +..++++ .+. ...++++++++||... .+.++. +..+.+||.
T Consensus 213 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~----~~~-~~~~~~~i~~~gH~~~-~e~p~~-~~~i~~fl~ 283 (285)
T 3bwx_A 213 TPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKM----ASR-PGVELVTLPRIGHAPT-LDEPES-IAAIGRLLE 283 (285)
T ss_dssp CCSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHHH----HTS-TTEEEEEETTCCSCCC-SCSHHH-HHHHHHHHT
T ss_pred cccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHHH----HhC-CCcEEEEeCCCCccch-hhCchH-HHHHHHHHH
Confidence 001123 7999999999999998 7665444 344 5689999999999865 344544 467888885
Q ss_pred H
Q 004456 739 K 739 (752)
Q Consensus 739 ~ 739 (752)
+
T Consensus 284 ~ 284 (285)
T 3bwx_A 284 R 284 (285)
T ss_dssp T
T ss_pred h
Confidence 3
No 236
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.61 E-value=1.3e-14 Score=148.03 Aligned_cols=209 Identities=13% Similarity=0.054 Sum_probs=126.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+.+...- ..|.||++||.+... ..| ..++..|.+ ||.|++ .+.+|+
T Consensus 20 ~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~-~~~v~~---~D~~G~ 70 (306)
T 3r40_A 20 TSSGRIFARVGG----------DGPPLLLLHGFPQTH-----------VMW----HRVAPKLAE-RFKVIV---ADLPGY 70 (306)
T ss_dssp CTTCCEEEEEEE----------CSSEEEEECCTTCCG-----------GGG----GGTHHHHHT-TSEEEE---ECCTTS
T ss_pred eCCEEEEEEEcC----------CCCeEEEECCCCCCH-----------HHH----HHHHHHhcc-CCeEEE---eCCCCC
Confidence 467778776642 147899999964211 112 234556666 999999 556677
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--
Q 004456 570 GDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT-- 640 (752)
Q Consensus 570 g~~~~~~-------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~-- 640 (752)
|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++.....
T Consensus 71 G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 144 (306)
T 3r40_A 71 GWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYW 144 (306)
T ss_dssp TTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHH
T ss_pred CCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccch
Confidence 7664432 23455566666665543 23689999999999999999999999999999999742100
Q ss_pred -------------------CC---------------------------ccCccccccc----hhhhH-------HHHHhc
Q 004456 641 -------------------LT---------------------------PFGFQTEFRT----LWEAT-------NVYIEM 663 (752)
Q Consensus 641 -------------------~~---------------------------~~~~~~~~~~----~~~~~-------~~~~~~ 663 (752)
.. .......... .+... ..+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (306)
T 3r40_A 145 QRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAG 224 (306)
T ss_dssp HHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhc
Confidence 00 0000000000 00000 000000
Q ss_pred ---------ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHH
Q 004456 664 ---------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETD 734 (752)
Q Consensus 664 ---------~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 734 (752)
.....+.++++|+|+++|++|.++| .....+..+.+ ....+++++ ++||... .+.++.+.+.+.
T Consensus 225 ~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~---~~~~~~~~~-~~gH~~~-~e~p~~~~~~i~ 297 (306)
T 3r40_A 225 AYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKW---ASDVQGAPI-ESGHFLP-EEAPDQTAEALV 297 (306)
T ss_dssp HTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHH---BSSEEEEEE-SSCSCHH-HHSHHHHHHHHH
T ss_pred ccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhh---cCCCeEEEe-cCCcCch-hhChHHHHHHHH
Confidence 0001347789999999999999987 55554444443 345678888 6899755 567788889999
Q ss_pred HHHHHH
Q 004456 735 RWLQKY 740 (752)
Q Consensus 735 ~fl~~~ 740 (752)
+||+++
T Consensus 298 ~fl~~~ 303 (306)
T 3r40_A 298 RFFSAA 303 (306)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 999865
No 237
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.61 E-value=8.6e-14 Score=159.87 Aligned_cols=263 Identities=11% Similarity=0.056 Sum_probs=162.3
Q ss_pred eeceeEec-CCCCeEEEeeccccccccccCcceEEEEEcccC-cceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWS-PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~S-PDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g-~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
.+..++|| |||++|||+... ..+...+||++++++| +. ++.. +......+.|||||+.|+|+.....
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-----~G~~~~~l~v~dl~~g~~~--l~~~----~~~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-----SGNEVYTIEFKRISDPSQT--IADK----VSGTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-----SSSSCEEEEEEETTCTTCC--CCCC----EEEECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeC-----CCCceEEEEEEECCCCCEe--CCcc----ccCceeeEEEecCCCEEEEEEECCC
Confidence 57789999 999999998752 1123357999999998 62 2211 1112457899999999999854211
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-Cc--cccCC---ccceeccccC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TA--KDFGT---PAVYTAVEPS 183 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~--~~l~~---~~~~~~~~~S 183 (752)
. ...+||++++.+ .. +.+.. ......+.||
T Consensus 244 ~--------------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 244 L--------------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp C--------------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred C--------------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 1 115899999944 32 23321 1345678999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecCCc--ee--EEecCCCCCCCCCcccCCccccccceeeeeC---CCce
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LV--RELCDLPPAEDIPVCYNSVREGMRSISWRAD---KPST 256 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspD---G~~~ 256 (752)
|||++|++.+.... ..+|+++|++++ +. +.+.... ....|+|| |+.
T Consensus 280 pDg~~l~~~~~~~~----------~~~l~~~d~~~~~~~~~~~~l~~~~----------------~~~~~s~~~~~g~~- 332 (751)
T 2xe4_A 280 ADTNTLCIGSQSPE----------TAEVHLLDLRKGNAHNTLEIVRPRE----------------KGVRYDVQMHGTSH- 332 (751)
T ss_dssp TTSSEEEEEEECSS----------CEEEEEEESSSCTTCCCEEESSCCC----------------TTCCEEEEEETTTE-
T ss_pred CCCCEEEEEecCCC----------CceEEEEECCCCCCCceeEEeecCC----------------CCceEEEeeeeCCE-
Confidence 99999999875431 358999999865 33 4443321 13466776 888
Q ss_pred EEEEEeccCCCCccccCccceEEeccCCCCCC-CCCeE-EeecccceeeeeeecCCceEEEeeecccCceeEEEEcC---
Q 004456 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP--- 331 (752)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~-l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~--- 331 (752)
|+|.+..+. ..+..|+.+++ ++ +..+. +........-..|+++++.|++....+ ...+|+++++
T Consensus 333 l~~~t~~~~-------a~~~~L~~~d~---~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-g~~~l~~~dl~~~ 401 (751)
T 2xe4_A 333 LVILTNEGG-------AVNHKLLIAPR---GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA-GLTRIWTMMADSQ 401 (751)
T ss_dssp EEEEECTTT-------CTTCEEEEEET---TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET-TEEEEEEEECCTT
T ss_pred EEEEeCCCC-------CCCcEEEEEcC---CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC-CEEEEEEEecccc
Confidence 888864420 13348999988 32 34344 444433333334666788888877444 5678999997
Q ss_pred ----CCCCcc-ceecc-ccccccccCCCCCCceee----CCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEe
Q 004456 332 ----GSKDVA-PRVLF-DRVFENVYSDPGSPMMTR----TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 401 (752)
Q Consensus 332 ----~~~~~~-~~~l~-~~~~~~~~~~~~~p~~~~----s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d 401 (752)
++ ++ ...+. +..... -.+.+ +++++.+++.... ......+|.+|
T Consensus 402 ~~~~~~--g~~~~~l~l~~~~~~-------~~~~~~~~~~~~~~~l~~~~ss-----------------~~~P~~~~~~d 455 (751)
T 2xe4_A 402 DGVFKA--GTGLREVVMEEPIFT-------VHLVESQMLEYEEPTFRMEYSS-----------------LATPNTWFDVS 455 (751)
T ss_dssp TSCCCT--TTCCEECCCCCSSCE-------EEECGGGCCCTTCSCEEEEEEE-----------------TTEEEEEEEEC
T ss_pred cccccC--CccceEECCCCceeE-------EEeccCcccCCCCCEEEEEEeC-----------------CCCCCEEEEEE
Confidence 44 23 33332 111100 01223 5688777776532 13345699999
Q ss_pred cCCCceeEEeec
Q 004456 402 INTGSKERIWES 413 (752)
Q Consensus 402 ~~~g~~~~l~~~ 413 (752)
+.+|+.+.|...
T Consensus 456 ~~~~~~~~l~~~ 467 (751)
T 2xe4_A 456 PQDHSRTAVKVR 467 (751)
T ss_dssp TTTCCEEEEEEC
T ss_pred CCCCcEEEEecc
Confidence 999988777643
No 238
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.61 E-value=1.1e-14 Score=137.43 Aligned_cols=130 Identities=14% Similarity=0.120 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHH
Q 004456 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 658 (752)
Q Consensus 579 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (752)
.....+|+.++++.+ + ++++++||||||.+++.++.++|++++++|+++|...... .+
T Consensus 58 ~~~~~~~~~~~~~~~------~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~~------------ 115 (191)
T 3bdv_A 58 LDRWVLAIRRELSVC------T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---EI------------ 115 (191)
T ss_dssp HHHHHHHHHHHHHTC------S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---TC------------
T ss_pred HHHHHHHHHHHHHhc------C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---cC------------
Confidence 344555555555432 2 6899999999999999999999999999999998644210 00
Q ss_pred HHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccc--cHHHHHHHHHHH
Q 004456 659 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRW 736 (752)
Q Consensus 659 ~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~f 736 (752)
.+...+.++++|+|+++|++|..+| +..++++.+.+ ..+++++++++|...... ...+.++.+.+|
T Consensus 116 -----~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~f 183 (191)
T 3bdv_A 116 -----DDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEF 183 (191)
T ss_dssp -----TTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHH
T ss_pred -----ccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHH
Confidence 0003356778999999999999999 89888888776 358999999999875321 334555888999
Q ss_pred HHHHhc
Q 004456 737 LQKYCL 742 (752)
Q Consensus 737 l~~~l~ 742 (752)
|++..+
T Consensus 184 l~~~~~ 189 (191)
T 3bdv_A 184 SEILIP 189 (191)
T ss_dssp HHTTCS
T ss_pred HHHhcc
Confidence 887643
No 239
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.61 E-value=5.8e-15 Score=154.47 Aligned_cols=180 Identities=16% Similarity=0.077 Sum_probs=117.0
Q ss_pred hhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004456 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPND---------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 616 (752)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 616 (752)
.++..|+++||.|++ .+.+|+|.+.... ......++|+.++++++.++ .+.++++++||||||.++
T Consensus 84 ~~~~~l~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a 158 (354)
T 2rau_A 84 SIVLYLARNGFNVYT---IDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAA 158 (354)
T ss_dssp CHHHHHHHTTEEEEE---EECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHH
T ss_pred hHHHHHHhCCCEEEE---ecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHH
Confidence 356788889999999 4555666654322 22366788999999998776 234789999999999999
Q ss_pred HHHHHhC-CCceeEEEEccCCCCC--CCCcc-----------------------Ccc---------c----------ccc
Q 004456 617 AHLLAHA-PHLFCCGIARSGSYNK--TLTPF-----------------------GFQ---------T----------EFR 651 (752)
Q Consensus 617 ~~~~~~~-p~~~~~~v~~~~~~~~--~~~~~-----------------------~~~---------~----------~~~ 651 (752)
+.++.++ |++++++|++++.... ....+ .+. . ...
T Consensus 159 ~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (354)
T 2rau_A 159 LNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSI 238 (354)
T ss_dssp HHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSH
T ss_pred HHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhH
Confidence 9999998 9999999999653211 00000 000 0 000
Q ss_pred chhhhHHHH----------------------H------------hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 652 TLWEATNVY----------------------I------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 652 ~~~~~~~~~----------------------~------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
..|-....+ . ..+....+.++++|+|+++|++|.++| ..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~~-- 313 (354)
T 2rau_A 239 SDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDSK-- 313 (354)
T ss_dssp HHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCGG--
T ss_pred HHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cchh--
Confidence 000000001 0 011122345789999999999998754 2221
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCc--cccHHHHHHHHHHHHHHH
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQKY 740 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 740 (752)
......++++++++||.... .+.++.+.+.+.+||+++
T Consensus 314 -----~l~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 314 -----ILPSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp -----GSCTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred -----hhccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 22245699999999997642 244678899999999875
No 240
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.61 E-value=1.7e-14 Score=146.69 Aligned_cols=208 Identities=12% Similarity=0.049 Sum_probs=132.9
Q ss_pred cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCC
Q 004456 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 572 (752)
Q Consensus 493 ~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 572 (752)
.++++...-|.+ ..|.||++||.+.. ...| ......|+++||.|++ .|.+|+|.+
T Consensus 33 ~~l~y~~~G~~~-------~g~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~rvia---~Dl~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-------AEHTFLCLHGEPSW-----------SFLY----RKMLPVFTAAGGRVVA---PDLFGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-------CSCEEEEECCTTCC-----------GGGG----TTTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEccCCC-------CCCeEEEECCCCCc-----------ceeH----HHHHHHHHhCCcEEEE---eCCCCCCCC
Confidence 677776654321 13789999996421 1122 2356678889999999 667788887
Q ss_pred CCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-ccC--
Q 004456 573 LPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFG-- 645 (752)
Q Consensus 573 ~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~-~~~-- 645 (752)
..+. .......+|+.+.++.+. .+++.|+||||||.+|+.+|.++|++++++|++++....... ...
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDALQ------LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHhC------CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 5432 235566777777776662 368999999999999999999999999999999874311100 000
Q ss_pred -c-------cc-c---------ccchhhhHHHHH----------------hc--------------ChhhhcC-CCCCCE
Q 004456 646 -F-------QT-E---------FRTLWEATNVYI----------------EM--------------SPITHAN-KIKKPI 676 (752)
Q Consensus 646 -~-------~~-~---------~~~~~~~~~~~~----------------~~--------------~~~~~~~-~~~~P~ 676 (752)
+ .. . ..........+. .. .....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 0 00 0 000000000000 00 0012345 889999
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 677 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 677 li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
|+++|++|..+| ..++++.+.+... ....+.++++||... . .++.+.+.+.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999875 4566666665433 333344789999876 4 68888899999974
No 241
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.61 E-value=2.2e-14 Score=143.81 Aligned_cols=200 Identities=10% Similarity=0.058 Sum_probs=127.0
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...| ..+...|+++||.|++ .+.+|+|.+.... .......+|+.+.
T Consensus 4 ~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~rVia---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACHG-----------GWSW----YKLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------cchH----HHHHHHHHhCCCEEEE---ecCCCCCCCccCcccccCHHHHHHHHHHH
Confidence 4789999996311 1112 2356678889999999 6677888774421 2345555555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-Cc----------c---Cccc-------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TP----------F---GFQT------- 648 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~-~~----------~---~~~~------- 648 (752)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++...... .. . .+..
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 4433 21 26899999999999999999999999999999886421100 00 0 0000
Q ss_pred ---cc-cchhhhHH---------------HHH-h-cCh--h--------hhc---CCCCCCEEEEEeCCCCCCCCCHHHH
Q 004456 649 ---EF-RTLWEATN---------------VYI-E-MSP--I--------THA---NKIKKPILIIHGEVDDKVGLFPMQA 694 (752)
Q Consensus 649 ---~~-~~~~~~~~---------------~~~-~-~~~--~--------~~~---~~~~~P~li~~G~~D~~v~~~~~~~ 694 (752)
.. ........ .+. . ..+ . ... ...++|+|+++|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 00 00000000 000 0 000 0 000 1135899999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 695 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
+.+.+.+. ..+++++|++||... .+.++.+.+.+.+|+.+...
T Consensus 219 ~~~~~~~p----~~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 219 RWQIDNIG----VTEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC-
T ss_pred HHHHHhCC----CCeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhcc
Confidence 77777664 248999999999865 56688899999999987643
No 242
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=9.1e-13 Score=145.23 Aligned_cols=328 Identities=11% Similarity=0.032 Sum_probs=188.7
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEc--ccCcceeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~--~~g~~~~lt~~~~ 82 (752)
..|.+++... ++..... +.+......+|||||++|+.... ...|.++|+ ++++...-.....
T Consensus 159 ~~V~v~D~~t----~~~~~~i--~~g~~~~~v~~spdg~~l~v~~~----------d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 159 GQIALVDGDS----KKIVKVI--DTGYAVHISRMSASGRYLLVIGR----------DARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp TEEEEEETTT----CCEEEEE--ECSTTEEEEEECTTSCEEEEEET----------TSEEEEEETTSSSCEEEEEEECCS
T ss_pred CeEEEEECCC----ceEEEEE--ecCcccceEEECCCCCEEEEECC----------CCeEEEEECcCCCCcEEEEEecCC
Confidence 3567777655 6543332 22334677899999999977532 278999999 6665433222221
Q ss_pred ccccccccceEEec----CCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 83 ICLNAVFGSFVWVN----NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 83 ~~~~~~~~~~~wsp----dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
....++||| ||++|+.... ...+
T Consensus 223 -----~p~~va~sp~~~~dg~~l~v~~~------------------------------------------------~~~~ 249 (543)
T 1nir_A 223 -----EARSVESSKFKGYEDRYTIAGAY------------------------------------------------WPPQ 249 (543)
T ss_dssp -----EEEEEEECCSTTCTTTEEEEEEE------------------------------------------------ESSE
T ss_pred -----CcceEEeCCCcCCCCCEEEEEEc------------------------------------------------cCCe
Confidence 356889999 9999887632 1146
Q ss_pred EEEEcc-CCCcc-ccCC-----------c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEe
Q 004456 159 LVLGSL-DGTAK-DFGT-----------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (752)
Q Consensus 159 i~~~~~-~G~~~-~l~~-----------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (752)
|.++|. +++.. .+.. + .....+.+||||+++++..... +.|++||..+.+...+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~------------g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET------------GKVLLVNYKDIDNLTV 317 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT------------TEEEEEECTTSSSCEE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC------------CeEEEEEecCCCccee
Confidence 777777 55332 2211 1 2456789999999988875543 4899999876432221
Q ss_pred cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc-cc--e
Q 004456 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LR--F 301 (752)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~--~ 301 (752)
+..... ..++++.|+|||++ ++.++. ..+.|.++|+ ++++........ .. .
T Consensus 318 ~~i~~~-----------~~~~~~~~spdg~~-l~va~~-----------~~~~v~v~D~---~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 318 TSIGAA-----------PFLHDGGWDSSHRY-FMTAAN-----------NSNKVAVIDS---KDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEECC-----------SSCCCEEECTTSCE-EEEEEG-----------GGTEEEEEET---TTTEEEEEEECSSSBCCT
T ss_pred EEeccC-----------cCccCceECCCCCE-EEEEec-----------CCCeEEEEEC---CCCeEEEeeccCCCCCCC
Confidence 111111 12568899999997 555542 3347888888 444433322211 11 1
Q ss_pred eeee-eecCCceEEEeeecccCceeEEEEcCCCCCc---cceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCc
Q 004456 302 RSVS-WCDDSLALVNETWYKTSQTRTWLVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 377 (752)
Q Consensus 302 ~~~~-~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~ 377 (752)
.... ++|++..++.+.... ...|.++++++... .-+.+....... .+.-.+.++|||++|+....-.
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~g----~~~~~v~~~pdg~~l~v~~~~~--- 442 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLG--DGSISLIGTDPKNHPQYAWKKVAELQGQG----GGSLFIKTHPKSSHLYVDTTFN--- 442 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCCEEEECCTTC---
T ss_pred CCcccCCCCCccEEEeccCC--CceEEEEEeCCCCCchhcCeEEEEEEcCC----CCceEEEcCCCCCcEEEecCCC---
Confidence 1223 478866665543222 23477777665210 012221111110 1223367899999998875110
Q ss_pred ceEEEEccCCCCCCC-CCCeeEEEecCCCcee-EEeeccc-----hhhhhceeeeecCCcceecccCCCEEEEEEecC-C
Q 004456 378 QIYILLNGRGFTPEG-NIPFLDLFDINTGSKE-RIWESNR-----EKYFETAVALVFGQGEEDINLNQLKILTSKESK-T 449 (752)
Q Consensus 378 ~~~~~~~~~g~~~~~-~~~~l~~~d~~~g~~~-~l~~~~~-----~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~-~ 449 (752)
++. ....|.+||+++++.. .+....+ . -...+.+ +.|++||++++++..+. .
T Consensus 443 ------------~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~-~~~~~~~-------~~~~~~g~~~~~s~~~~~~ 502 (543)
T 1nir_A 443 ------------PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE-GAKRVVQ-------PEYNKRGDEVWFSVWNGKN 502 (543)
T ss_dssp ------------SSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS-SCCEEEE-------EEECSSSSEEEEEEECCTT
T ss_pred ------------CCcccCceEEEEECCCCCCCeEEeechhhcccCC-CCCceEe-------ccCCCCCCEEEEEeecCCC
Confidence 000 0225999999988754 3321100 0 0012233 48999999999987543 3
Q ss_pred CCcEEEEEECCCCCeeEee
Q 004456 450 EITQYHILSWPLKKSSQIT 468 (752)
Q Consensus 450 ~~~~i~~~d~~~g~~~~lt 468 (752)
....|.++|..++++.+.-
T Consensus 503 ~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 503 DSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp SCCEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCceEEEee
Confidence 4678999999998866543
No 243
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.60 E-value=3.3e-13 Score=145.86 Aligned_cols=177 Identities=9% Similarity=0.129 Sum_probs=104.3
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC-ceeEEecCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
..+..++|+|||+.|+.. .+ +.|.+||+.. +....+.... +..+......+..++|+|+|
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d-------------~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD-------------LRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS-------------SEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-CC-------------CeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCC
Confidence 678899999999999875 33 3799999983 3333322111 11122233447789999999
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-----CeEEeeccc------------ceeeeeeecCCceEEEe
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-----PEILHKLDL------------RFRSVSWCDDSLALVNE 316 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~l~~~~~------------~~~~~~~spDg~~l~~~ 316 (752)
...|+..+ ..+.|.+||+. .+. ...+..... .+..++|+|||+.|+..
T Consensus 239 ~~~l~s~~------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 239 CNTFVYSS------------SKGTIRLCDMR---ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp TTEEEEEE------------TTSCEEEEETT---TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEe------------CCCeEEEEECc---CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 43144443 33478888883 333 244443333 78899999999998876
Q ss_pred eecccCceeEEEEcCCCCCccceeccccccccc-----cCCC---CCCceeeCCCCCeEEEeeeecCCcceEEEEccCCC
Q 004456 317 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV-----YSDP---GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGF 388 (752)
Q Consensus 317 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-----~~~~---~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~ 388 (752)
. . ..|.++++.........+........ +... ....++|+|||++|+..+.+
T Consensus 304 ~----~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d--------------- 363 (447)
T 3dw8_B 304 D----Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN--------------- 363 (447)
T ss_dssp E----S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST---------------
T ss_pred e----C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC---------------
Confidence 5 2 45888887652111111211110000 0000 01126799999999766522
Q ss_pred CCCCCCCeeEEEecCCCceeEEe
Q 004456 389 TPEGNIPFLDLFDINTGSKERIW 411 (752)
Q Consensus 389 ~~~~~~~~l~~~d~~~g~~~~l~ 411 (752)
..|++||+.+++...+.
T Consensus 364 ------g~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 364 ------NFFRMFDRNTKRDITLE 380 (447)
T ss_dssp ------TEEEEEETTTCCEEEEE
T ss_pred ------CEEEEEEcCCCcceeee
Confidence 15889999888775543
No 244
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.60 E-value=8.2e-14 Score=149.36 Aligned_cols=275 Identities=7% Similarity=-0.015 Sum_probs=170.5
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
...++|||||++|+..+. ...|+++++.+++..+...... ......|+|||+.|+..+.+
T Consensus 59 ~~~~~~s~~g~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~d----- 118 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARL----------DGHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTTE----- 118 (420)
T ss_dssp CTTCEEEEEETTEEEEEE----------TTEEEEEECCSEETTTTSCSCC-----EEEEEEECSSSCEEEEEETT-----
T ss_pred ccceeeeecCCeEEEEEc----------CCcEEEEEecccceeeEEecCC-----ceEEEEEecCCCEEEEEECC-----
Confidence 346899999999998643 3689999988877655543332 23455789999998876321
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcccc-CCc-cceeccccCCCCceE
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-GTP-AVYTAVEPSPDQKYV 189 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l-~~~-~~~~~~~~SpDGk~l 189 (752)
+.|.++++ +++.... ..+ ..+..++|+|||+.|
T Consensus 119 --------------------------------------------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 119 --------------------------------------------GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp --------------------------------------------SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred --------------------------------------------CCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 57888898 5544444 344 889999999999999
Q ss_pred EEEecccCccccccccCccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
+..+.+. .+.+||+.+++. ..+.... ..+..++|+|||+. |+..+
T Consensus 155 ~s~s~d~-------------~i~iwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~s~~------- 200 (420)
T 3vl1_A 155 ISSSQDM-------------QLKIWSVKDGSNPRTLIGHR-------------ATVTDIAIIDRGRN-VLSAS------- 200 (420)
T ss_dssp EEEETTS-------------EEEEEETTTCCCCEEEECCS-------------SCEEEEEEETTTTE-EEEEE-------
T ss_pred EEEeCCC-------------eEEEEeCCCCcCceEEcCCC-------------CcEEEEEEcCCCCE-EEEEc-------
Confidence 8876553 799999986543 3333222 23678999999996 55443
Q ss_pred ccccCccceEEeccCCCCCCCCCe-EEee------------------------cccceeeeeeecCCceEEEeeecccCc
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPE-ILHK------------------------LDLRFRSVSWCDDSLALVNETWYKTSQ 323 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~-~l~~------------------------~~~~~~~~~~spDg~~l~~~~~~~~~~ 323 (752)
..+.+.+||+ ..+... .+.. ....+..++|+|||+.|+.+. ..
T Consensus 201 -----~d~~v~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~d 268 (420)
T 3vl1_A 201 -----LDGTIRLWEC---GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH----VS 268 (420)
T ss_dssp -----TTSCEEEEET---TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE----TT
T ss_pred -----CCCcEEEeEC---CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc----CC
Confidence 2336777777 322222 2211 023455677899999998876 33
Q ss_pred eeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCC-eEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEec
Q 004456 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT-NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 402 (752)
Q Consensus 324 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 402 (752)
..|.++++.++. ....+...... ..-.++|+|+|+ +|+....+ ..|.+||+
T Consensus 269 g~i~i~d~~~~~-~~~~~~~~~~~------~v~~~~~~~~~~~~l~~g~~d---------------------g~i~vwd~ 320 (420)
T 3vl1_A 269 GVITVHNVFSKE-QTIQLPSKFTC------SCNSLTVDGNNANYIYAGYEN---------------------GMLAQWDL 320 (420)
T ss_dssp SCEEEEETTTCC-EEEEECCTTSS------CEEEEEECSSCTTEEEEEETT---------------------SEEEEEET
T ss_pred CeEEEEECCCCc-eeEEcccccCC------CceeEEEeCCCCCEEEEEeCC---------------------CeEEEEEc
Confidence 458888887742 22222211111 111377999999 66655422 25999999
Q ss_pred CCCce--eEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 403 NTGSK--ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 403 ~~g~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
.+++. ..+...... .+. ..++++++.|+ +.. ....|++|++..
T Consensus 321 ~~~~~~~~~~~~~~~~----~v~--------~~~~~~~~~l~-s~~---~d~~v~iw~~~~ 365 (420)
T 3vl1_A 321 RSPECPVGEFLINEGT----PIN--------NVYFAAGALFV-SSG---FDTSIKLDIISD 365 (420)
T ss_dssp TCTTSCSEEEEESTTS----CEE--------EEEEETTEEEE-EET---TTEEEEEEEECC
T ss_pred CCCcCchhhhhccCCC----Cce--------EEEeCCCCEEE-Eec---CCccEEEEeccC
Confidence 88753 333221111 111 13455666444 322 234688888665
No 245
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.60 E-value=8.7e-15 Score=146.58 Aligned_cols=224 Identities=11% Similarity=0.021 Sum_probs=134.4
Q ss_pred CceEEEEEEcCC-CcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcE
Q 004456 480 LQKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (752)
Q Consensus 480 ~~~~~~~~~~~~-g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~ 557 (752)
...+.+++.+.. +..+.+++|+|+++++. +++|+|+++||++. +..........+++ .+..
T Consensus 11 ~~~~~~~~~S~~~~~~~~~~vylP~~y~~~--~~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~i 73 (278)
T 2gzs_A 11 YHFSATSFDSVDGTRHYRVWTAVPNTTAPA--SGYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPV 73 (278)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSCCCT--TCEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCE
T ss_pred CceEEEEEEcCCCCceEEEEEECCCCCCCC--CCCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeE
Confidence 457778888765 67899999999988654 35998877777421 11111123344554 5677
Q ss_pred EEecCCCCCC---------CCCCCC-------------CCchhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 004456 558 VLAGPSIPII---------GEGDKL-------------PNDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHSYGAF 614 (752)
Q Consensus 558 v~~~~~~~~~---------g~g~~~-------------~~~~~~~~~~~d~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 614 (752)
|+.+++.... .+.... ............+ .+++.++.++..+|++|++|+|+||||+
T Consensus 74 vV~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~ 153 (278)
T 2gzs_A 74 IVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGL 153 (278)
T ss_dssp EEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHH
T ss_pred EEEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHH
Confidence 7653332110 000000 0000011222222 1344555555567888999999999999
Q ss_pred HHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCC------
Q 004456 615 MTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG------ 688 (752)
Q Consensus 615 ~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~------ 688 (752)
+|+.++.+ |+.|+++++++|...+. .. ........... . .....|+++.+|+.|..++
T Consensus 154 ~a~~~~~~-p~~f~~~~~~s~~~~~~-------~~-----~~~~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~ 217 (278)
T 2gzs_A 154 FVLDSWLS-SSYFRSYYSASPSLGRG-------YD-----ALLSRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAV 217 (278)
T ss_dssp HHHHHHHH-CSSCSEEEEESGGGSTT-------HH-----HHHHHHHTSCT--T-TTTTCEEEEEECCC-----------
T ss_pred HHHHHHhC-ccccCeEEEeCcchhcC-------cc-----hHHHHHHHhhc--c-CCCCCcEEEEecCccccccccchhh
Confidence 99999999 99999999999853211 00 00001111110 0 1124689999999997631
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 689 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
++..++++++++|++.|.++++.++|+++|.... +.. +...+.||.++
T Consensus 218 ~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~---~~~-~~~~l~fl~~~ 265 (278)
T 2gzs_A 218 GVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF---NAS-FRQALLDISGE 265 (278)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH---HHH-HHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchh---HHH-HHHHHHHHhhC
Confidence 0168899999999999999999999999997432 222 34456677653
No 246
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.60 E-value=9.1e-14 Score=145.22 Aligned_cols=300 Identities=8% Similarity=-0.010 Sum_probs=174.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecC---CcEEEEEecCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN---STLLIFTIPSS 108 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd---g~~l~~~~~~~ 108 (752)
.+...+|||||+.++.+...+ .....|.++++++++...+..... ...+..+.|+|+ |+.|+..+.+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~d- 89 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDFG- 89 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEETT-
T ss_pred ceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecCC-
Confidence 588999999998887754310 135789999999888655432211 114678899999 6877765321
Q ss_pred CCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC--ccccCCc-cceecc----
Q 004456 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGTP-AVYTAV---- 180 (752)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~--~~~l~~~-~~~~~~---- 180 (752)
+.|.++++ +++ ...+..+ ..+..+
T Consensus 90 ------------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 90 ------------------------------------------------GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ------------------------------------------------SCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ------------------------------------------------CeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 57888888 443 3344434 445544
Q ss_pred --ccCCCCceEEEEecccCccccccccCccccEEEEecCCce--eEEecCCCCCCCCCcccCCcccccccee----eeeC
Q 004456 181 --EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSIS----WRAD 252 (752)
Q Consensus 181 --~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~----wspD 252 (752)
+|||||+.|+..+.+. .+.+||+..+. ...+........ ..+..+. |+|+
T Consensus 122 ~~~~s~~~~~l~~~~~d~-------------~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDG-------------TVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETTS-------------CEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCCC-------------eEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 7899999998876553 79999998764 333332222111 1133444 8999
Q ss_pred CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeec---CCceEEEeeecccCceeEEEE
Q 004456 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNETWYKTSQTRTWLV 329 (752)
Q Consensus 253 G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~sp---Dg~~l~~~~~~~~~~~~l~~~ 329 (752)
|+. |+... ..+.+.++|+ .++...........+..++|+| +++.|+.+. ....|.++
T Consensus 180 ~~~-l~~~~------------~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~----~dg~i~i~ 239 (357)
T 3i2n_A 180 ERV-VCAGY------------DNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATS----LEGKFHVF 239 (357)
T ss_dssp CCE-EEEEE------------TTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE----STTEEEEE
T ss_pred CCE-EEEEc------------cCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC----CCCeEEEE
Confidence 996 55553 3347899998 4445545556677889999999 999888876 33357777
Q ss_pred cCCCCCccceecc--c--cccccccCCCCCCceeeCCCCC-eEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCC
Q 004456 330 CPGSKDVAPRVLF--D--RVFENVYSDPGSPMMTRTSTGT-NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 404 (752)
Q Consensus 330 ~~~~~~~~~~~l~--~--~~~~~~~~~~~~p~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~ 404 (752)
++.++.. ...+. . .... ..-.++|+|+|+ +|+....+ ..|.+||+.+
T Consensus 240 d~~~~~~-~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~~~d---------------------g~i~iwd~~~ 291 (357)
T 3i2n_A 240 DMRTQHP-TKGFASVSEKAHKS------TVWQVRHLPQNRELFLTAGGA---------------------GGLHLWKYEY 291 (357)
T ss_dssp EEEEEET-TTEEEEEEEECCSS------CEEEEEEETTEEEEEEEEETT---------------------SEEEEEEEEC
T ss_pred eCcCCCc-ccceeeeccCCCcC------CEEEEEECCCCCcEEEEEeCC---------------------CcEEEeecCC
Confidence 7765311 11111 0 1111 112367999998 45444421 1477788765
Q ss_pred CceeEEeeccchh--------hhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 004456 405 GSKERIWESNREK--------YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (752)
Q Consensus 405 g~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g 462 (752)
+........++.. ..............++|+||++.|+++... ...|++||+.+.
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 292 PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET---TSEEEEEEECC-
T ss_pred CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC---CCcEEEEECCCc
Confidence 5433211110000 000000011112246899999999866543 336888886653
No 247
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.59 E-value=1.1e-14 Score=147.88 Aligned_cols=209 Identities=8% Similarity=-0.075 Sum_probs=133.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+....+- +.|+||++||.+... ..|. .++..|+ .+|.|++ .+.+|+
T Consensus 15 ~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~~----~~~~~l~-~~~~vi~---~D~~G~ 65 (297)
T 2qvb_A 15 IAGKRMAYIDEG----------KGDAIVFQHGNPTSS-----------YLWR----NIMPHLE-GLGRLVA---CDLIGM 65 (297)
T ss_dssp ETTEEEEEEEES----------SSSEEEEECCTTCCG-----------GGGT----TTGGGGT-TSSEEEE---ECCTTS
T ss_pred ECCEEEEEEecC----------CCCeEEEECCCCchH-----------HHHH----HHHHHHh-hcCeEEE---EcCCCC
Confidence 367777766552 148999999964221 1222 2233344 4599999 555677
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004456 570 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 642 (752)
Q Consensus 570 g~~~~~~------~~~~~~~~d~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~ 642 (752)
|.+.... .......+|+.++++.+ +. +++.++||||||.+++.++.++|++++++|+++|.......
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 139 (297)
T 2qvb_A 66 GASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTW 139 (297)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCG
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccC
Confidence 7664432 34556667776666554 23 68999999999999999999999999999999986531100
Q ss_pred ---cc---------Cccc---------------------ccc----------------chhhhH-HHHHhc---------
Q 004456 643 ---PF---------GFQT---------------------EFR----------------TLWEAT-NVYIEM--------- 663 (752)
Q Consensus 643 ---~~---------~~~~---------------------~~~----------------~~~~~~-~~~~~~--------- 663 (752)
.. .... ... ...... ..+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2qvb_A 140 ADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEV 219 (297)
T ss_dssp GGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHH
T ss_pred CCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhh
Confidence 00 0000 000 000000 000000
Q ss_pred -----ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 664 -----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 664 -----~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+....+.++++|+|+++|++|..+| ...++.+.+.+ .. +++++ ++||... .+.++.+.+.+.+||+
T Consensus 220 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl~ 290 (297)
T 2qvb_A 220 VALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQFVR 290 (297)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHHHHH
Confidence 1123345678999999999999998 77766555433 34 78888 9999865 5668889999999999
Q ss_pred HHhc
Q 004456 739 KYCL 742 (752)
Q Consensus 739 ~~l~ 742 (752)
++..
T Consensus 291 ~~~~ 294 (297)
T 2qvb_A 291 RLRS 294 (297)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8753
No 248
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.59 E-value=6.1e-13 Score=141.62 Aligned_cols=267 Identities=10% Similarity=0.078 Sum_probs=170.4
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+++++++++...+...... ..+..+.|+|||+.|+..+.+
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~d--------------------------------- 155 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGN--------------------------------- 155 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETT---------------------------------
T ss_pred CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCC---------------------------------
Confidence 46899999999987666544321 146789999999998876421
Q ss_pred ccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
+.|.++++ ++ ....+..+ ..+..+.| +++.|+..+.+ +.+.+||+.
T Consensus 156 ----------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~i~d~~ 204 (401)
T 4aez_A 156 ----------------GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRS-------------GAIHHHDVR 204 (401)
T ss_dssp ----------------SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETT-------------SEEEEEETT
T ss_pred ----------------CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCC-------------CCEEEEecc
Confidence 57888888 55 34444444 77788888 56777766555 379999997
Q ss_pred Cc--eeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEE
Q 004456 218 GK--LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EIL 294 (752)
Q Consensus 218 ~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l 294 (752)
.. ....+.... ..+..+.|+|||+. |+... ..+.+.+||+ ..+.. ..+
T Consensus 205 ~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~s~~------------~d~~v~iwd~---~~~~~~~~~ 255 (401)
T 4aez_A 205 IANHQIGTLQGHS-------------SEVCGLAWRSDGLQ-LASGG------------NDNVVQIWDA---RSSIPKFTK 255 (401)
T ss_dssp SSSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE------------TTSCEEEEET---TCSSEEEEE
T ss_pred cCcceeeEEcCCC-------------CCeeEEEEcCCCCE-EEEEe------------CCCeEEEccC---CCCCccEEe
Confidence 33 233333222 23678999999996 55543 3347889988 33333 334
Q ss_pred eecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeec
Q 004456 295 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE 374 (752)
Q Consensus 295 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~ 374 (752)
......+..++|+|++..++.... ......|.++++.++ .......... ..-.++|+|+|++|+....
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~-gs~d~~i~i~d~~~~--~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~g-- 323 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGG-GTMDKQIHFWNAATG--ARVNTVDAGS-------QVTSLIWSPHSKEIMSTHG-- 323 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEEC-CTTTCEEEEEETTTC--CEEEEEECSS-------CEEEEEECSSSSEEEEEEC--
T ss_pred cCCcceEEEEEECCCCCCEEEEec-CCCCCEEEEEECCCC--CEEEEEeCCC-------cEEEEEECCCCCeEEEEee--
Confidence 456667889999999988887652 113456889998874 2222222111 1123779999999988651
Q ss_pred CCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEE
Q 004456 375 NDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 454 (752)
Q Consensus 375 ~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i 454 (752)
.....|.+||+.+++...+...... ......++|+|||+.|+.... ...|
T Consensus 324 -----------------~~dg~i~v~~~~~~~~~~~~~~~~h---------~~~v~~~~~s~dg~~l~s~~~----dg~i 373 (401)
T 4aez_A 324 -----------------FPDNNLSIWSYSSSGLTKQVDIPAH---------DTRVLYSALSPDGRILSTAAS----DENL 373 (401)
T ss_dssp -----------------TTTCEEEEEEEETTEEEEEEEEECC---------SSCCCEEEECTTSSEEEEECT----TSEE
T ss_pred -----------------cCCCcEEEEecCCccceeEEEecCC---------CCCEEEEEECCCCCEEEEEeC----CCcE
Confidence 1122589999988776555332111 112234589999998866532 3469
Q ss_pred EEEECCCCCee
Q 004456 455 HILSWPLKKSS 465 (752)
Q Consensus 455 ~~~d~~~g~~~ 465 (752)
++|++.+++..
T Consensus 374 ~iw~~~~~~~~ 384 (401)
T 4aez_A 374 KFWRVYDGDHV 384 (401)
T ss_dssp EEEECCC----
T ss_pred EEEECCCCccc
Confidence 99998876643
No 249
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.59 E-value=3e-13 Score=141.86 Aligned_cols=267 Identities=8% Similarity=0.015 Sum_probs=171.0
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|.++++.. ++...... .....+..+.|+|||++|+..+ ....|.++++.+++.........
T Consensus 54 g~i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~-- 116 (369)
T 3zwl_B 54 SSASVWYSLN----GERLGTLD-GHTGTIWSIDVDCFTKYCVTGS----------ADYSIKLWDVSNGQCVATWKSPV-- 116 (369)
T ss_dssp SCEEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEE----------TTTEEEEEETTTCCEEEEEECSS--
T ss_pred CEEEEEeCCC----chhhhhhh-hcCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCcEEEEeecCC--
Confidence 4577888766 54433321 1233588999999999998863 34689999999888655544332
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
.+..+.|+|+++.|+........ ..+.|.++++
T Consensus 117 ---~v~~~~~~~~~~~l~~~~~~~~~--------------------------------------------~~g~i~~~d~ 149 (369)
T 3zwl_B 117 ---PVKRVEFSPCGNYFLAILDNVMK--------------------------------------------NPGSINIYEI 149 (369)
T ss_dssp ---CEEEEEECTTSSEEEEEECCBTT--------------------------------------------BCCEEEEEEE
T ss_pred ---CeEEEEEccCCCEEEEecCCccC--------------------------------------------CCCEEEEEEe
Confidence 46788999999999886432000 1146666666
Q ss_pred -CC-Cc-----------cccCCc-c--ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC-cee-EEecC
Q 004456 165 -DG-TA-----------KDFGTP-A--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLV-RELCD 226 (752)
Q Consensus 165 -~G-~~-----------~~l~~~-~--~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~-~~l~~ 226 (752)
.+ .. ..+... . .+..++|+|||+.|+....+. .|.+||+.+ ... ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-------------~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-------------KISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-------------EEEEEETTTTTEEEEEEEC
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-------------EEEEEECCCCcEeEEEEec
Confidence 22 11 111111 2 778999999999998876553 799999987 333 33332
Q ss_pred CCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeee
Q 004456 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW 306 (752)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 306 (752)
.. ..+..+.|+|||+. |+..+ ..+.+.++|+ ..............+..++|
T Consensus 217 ~~-------------~~v~~~~~~~~~~~-l~~~~------------~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~ 267 (369)
T 3zwl_B 217 HE-------------KSISDMQFSPDLTY-FITSS------------RDTNSFLVDV---STLQVLKKYETDCPLNTAVI 267 (369)
T ss_dssp CS-------------SCEEEEEECTTSSE-EEEEE------------TTSEEEEEET---TTCCEEEEEECSSCEEEEEE
T ss_pred CC-------------CceeEEEECCCCCE-EEEec------------CCceEEEEEC---CCCceeeeecCCCCceeEEe
Confidence 22 22678999999996 55553 3447899998 44455544556677889999
Q ss_pred ecCCceEEEeeeccc----------CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCC
Q 004456 307 CDDSLALVNETWYKT----------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (752)
Q Consensus 307 spDg~~l~~~~~~~~----------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~ 376 (752)
+|+++.+++...... ....+.++++.++ +.......... ..-.++|+|||++|+....++
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~------~v~~~~~s~~~~~l~s~~~dg-- 337 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--EEIGRVQGHFG------PLNTVAISPQGTSYASGGEDG-- 337 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTC--CEEEEEECCSS------CEEEEEECTTSSEEEEEETTS--
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--cchhheecccC------cEEEEEECCCCCEEEEEcCCC--
Confidence 999999998773321 1125777777764 22222211111 111267999999888876321
Q ss_pred cceEEEEccCCCCCCCCCCeeEEEecCCCc
Q 004456 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (752)
Q Consensus 377 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (752)
.|.+|++.++.
T Consensus 338 -------------------~v~iw~~~~~~ 348 (369)
T 3zwl_B 338 -------------------FIRLHHFEKSY 348 (369)
T ss_dssp -------------------EEEEEEECHHH
T ss_pred -------------------eEEEEECcccc
Confidence 58888886554
No 250
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.59 E-value=1.4e-14 Score=144.71 Aligned_cols=202 Identities=14% Similarity=0.104 Sum_probs=120.9
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 589 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 589 (752)
+.|.||++||.+.. ... +..++..|+ .+|.|++ .+.+|+|.+... ........+|+.+.
T Consensus 19 ~~~~vv~~HG~~~~-----------~~~----~~~~~~~l~-~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGGS-----------ASF----FFPLAKALA-PAVEVLA---VQYPGRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTCC-----------GGG----GHHHHHHHT-TTEEEEE---ECCTTSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCC-----------chh----HHHHHHHhc-cCcEEEE---ecCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 47999999996421 011 123444554 4599999 455566655332 22344555555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEccCCCCCCCCccCccc-cc--------------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQT-EF-------------- 650 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~----~~~~v~~~~~~~~~~~~~~~~~-~~-------------- 650 (752)
++.+ +..+++|+||||||.+++.++.+.|++ ++++|+.++............. ..
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 5443 347899999999999999999999986 8888888765321111000000 00
Q ss_pred cchhhhH--------------HHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004456 651 RTLWEAT--------------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 716 (752)
Q Consensus 651 ~~~~~~~--------------~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 716 (752)
....... .......... ...+++|+|+++|++|..+| ...++.+.+.+. .+++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVS--VGEARAWEEHTT---GPADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCC--HHHHHGGGGGBS---SCEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCC--HHHHHHHHHhcC---CCceEEEecC-
Confidence 0000000 0001111111 14678999999999999998 777666655442 2489999998
Q ss_pred CccCCccccHHHHHHHHHHHHHHHhcCCCC
Q 004456 717 HHVYAARENVMHVIWETDRWLQKYCLSNTS 746 (752)
Q Consensus 717 ~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 746 (752)
||... .+.++.+.+.+.+||++.....+.
T Consensus 227 gH~~~-~~~~~~~~~~i~~fl~~~~~~g~~ 255 (267)
T 3fla_A 227 GHFFL-VDQAAPMIATMTEKLAGPALTGST 255 (267)
T ss_dssp STTHH-HHTHHHHHHHHHHHTC--------
T ss_pred Cceee-ccCHHHHHHHHHHHhccccccCcc
Confidence 99865 456788889999999887654433
No 251
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.59 E-value=4.2e-14 Score=150.08 Aligned_cols=151 Identities=15% Similarity=0.231 Sum_probs=90.6
Q ss_pred CCceEEEEEEcCC--C--cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC
Q 004456 479 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (752)
Q Consensus 479 ~~~~~~~~~~~~~--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 554 (752)
.+...++.|.+.+ | ..+.++++.|.+..+ .++.|+||++||++.......... ......+..++..|+++
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~ 116 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQAKE----IRDAKGDDPLVTRLASQ 116 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCHHHH----HHHTTTCSHHHHTTGGG
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCcccccc----cccccchHHHHHHHHHC
Confidence 3456677776654 3 358899999987432 346899999999753211000000 00011123567788899
Q ss_pred CcEEEecCCCCCCCCCCCCCC-chh--H---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHH-hCC--
Q 004456 555 RFAVLAGPSIPIIGEGDKLPN-DRF--V---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLA-HAP-- 624 (752)
Q Consensus 555 G~~v~~~~~~~~~g~g~~~~~-~~~--~---~~~~~d~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~-~~p-- 624 (752)
||+|++++ .+|+|.+... ..+ . ...+.|..+++..+.++ +..+.++|+|+||||||++++.++. ..+
T Consensus 117 G~~V~~~D---~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~ 193 (397)
T 3h2g_A 117 GYVVVGSD---YLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHL 193 (397)
T ss_dssp TCEEEEEC---CTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEec---CCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhc
Confidence 99999944 4566655321 111 1 12334445555444443 4445679999999999999988873 222
Q ss_pred --C-ceeEEEEccCCCC
Q 004456 625 --H-LFCCGIARSGSYN 638 (752)
Q Consensus 625 --~-~~~~~v~~~~~~~ 638 (752)
+ .+.+++..++..+
T Consensus 194 ~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 194 SKEFHLVASAPISGPYA 210 (397)
T ss_dssp TTTSEEEEEEEESCCSS
T ss_pred CcCcceEEEeccccccc
Confidence 2 5778887776655
No 252
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.59 E-value=8e-13 Score=143.07 Aligned_cols=235 Identities=7% Similarity=-0.029 Sum_probs=133.4
Q ss_pred cEEEEEccC---CCc-cccC--Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCC
Q 004456 157 AQLVLGSLD---GTA-KDFG--TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLP 228 (752)
Q Consensus 157 ~~i~~~~~~---G~~-~~l~--~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~ 228 (752)
+.|.+|++. |+. ..+. .. ..+..++|+|||++|+..... ..+++|++....... ...
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-------------g~v~~~~~~~~~~~~~~~~-- 189 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-------------GDVYSIDINSIPEEKFTQE-- 189 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTSCCCSSCCCC--
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-------------CcEEEEecCCcccccccce--
Confidence 456666664 433 3332 22 677899999999999988654 378999887654321 000
Q ss_pred CCCCCCcccCCccccccceeeeeC---CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE-Eeecccceeee
Q 004456 229 PAEDIPVCYNSVREGMRSISWRAD---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSV 304 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspD---G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~~~~~~~~~ 304 (752)
.+......+..++|+|| |+. |+..+ ..+.|.+||+. .+..... +......+..+
T Consensus 190 -------~~~~h~~~v~~~~~sp~~~~~~~-l~s~~------------~d~~i~vwd~~--~~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 190 -------PILGHVSMLTDVHLIKDSDGHQF-IITSD------------RDEHIKISHYP--QCFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp -------CSEECSSCEEEEEEEECTTSCEE-EEEEE------------TTSCEEEEEES--CTTCEEEECCCCSSCEEEE
T ss_pred -------eeecccCceEEEEEcCCCCCCcE-EEEEc------------CCCcEEEEECC--CCceeeeeecCCCCceEEE
Confidence 11112234678999999 775 54443 23478888873 2223333 33455678899
Q ss_pred eeecCCceEEEeeecccCceeEEEEcCCCCCccceeccc-cc-cccc-----------------cCCCCCCceeeCCCCC
Q 004456 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD-RV-FENV-----------------YSDPGSPMMTRTSTGT 365 (752)
Q Consensus 305 ~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-~~-~~~~-----------------~~~~~~p~~~~s~dg~ 365 (752)
+|+ ||+.|+..+ ....|.++++.++ +...... .. .... ......-.++|+|||+
T Consensus 248 ~~s-d~~~l~s~~----~d~~v~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 248 CCG-KDYLLLSAG----GDDKIFAWDWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp EEC-STTEEEEEE----SSSEEEEEETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred EEC-CCCEEEEEe----CCCeEEEEECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 999 999988876 3346888898874 2221111 00 0000 0000111357999999
Q ss_pred eEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEec--CCC-ceeEEeeccchhhhhceeeeecCCcceecccCCCEEE
Q 004456 366 NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI--NTG-SKERIWESNREKYFETAVALVFGQGEEDINLNQLKIL 442 (752)
Q Consensus 366 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~g-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~ 442 (752)
+|++... ....|.+|++ .++ ..+.+..-... ..+. .++|+|+ .++
T Consensus 321 ~l~~~~~--------------------~d~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~-------~~~~~~~--~~~ 368 (450)
T 2vdu_B 321 FVAFFVE--------------------ATKCIIILEMSEKQKGDLALKQIITFP---YNVI-------SLSAHND--EFQ 368 (450)
T ss_dssp EEEEEET--------------------TCSEEEEEEECSSSTTCEEEEEEEECS---SCEE-------EEEEETT--EEE
T ss_pred EEEEEEC--------------------CCCeEEEEEeccCCCCceeeccEeccC---CceE-------EEEecCC--cEE
Confidence 9888761 1125888888 443 22322111100 0122 3478884 355
Q ss_pred EEEecCCCCc------EEEEEECCCCCeeEee
Q 004456 443 TSKESKTEIT------QYHILSWPLKKSSQIT 468 (752)
Q Consensus 443 ~~~~~~~~~~------~i~~~d~~~g~~~~lt 468 (752)
++..+...+. ++|.++..+++.+ ++
T Consensus 369 v~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~ 399 (450)
T 2vdu_B 369 VTLDNKESSGVQKNFAKFIEYNLNENSFV-VN 399 (450)
T ss_dssp EEECCTTCCSSCCCSEEEEEEETTTTEEE-EC
T ss_pred EEEecccCCCCCCcceEEEEEEcCCCeEE-Ec
Confidence 5544444343 7888887777654 56
No 253
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.58 E-value=7.4e-13 Score=140.98 Aligned_cols=267 Identities=11% Similarity=0.110 Sum_probs=173.7
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
...|+++++.. |+...+........+...+|||||++||... ..+.|.++++.+++..+.......
T Consensus 112 d~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~ 177 (401)
T 4aez_A 112 ERNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGL----------GNGLVDIYDVESQTKLRTMAGHQA 177 (401)
T ss_dssp TTEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEEC----------CCCeEEEEECcCCeEEEEecCCCC
Confidence 34688888877 7766665443444689999999999999864 346889999988775443322221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+..+.| +++.|+..+. .+.|.+++
T Consensus 178 ----~v~~~~~--~~~~l~~~~~-------------------------------------------------dg~i~i~d 202 (401)
T 4aez_A 178 ----RVGCLSW--NRHVLSSGSR-------------------------------------------------SGAIHHHD 202 (401)
T ss_dssp ----CEEEEEE--ETTEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred ----ceEEEEE--CCCEEEEEcC-------------------------------------------------CCCEEEEe
Confidence 3567788 4566665532 15788888
Q ss_pred cC-C--CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccC
Q 004456 164 LD-G--TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYN 238 (752)
Q Consensus 164 ~~-G--~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~ 238 (752)
+. + ....+..+ ..+..+.|+|||+.|+....++ .+.+||+.+..... +....
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-------------~v~iwd~~~~~~~~~~~~~~---------- 259 (401)
T 4aez_A 203 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-------------VVQIWDARSSIPKFTKTNHN---------- 259 (401)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTCSSEEEEECCCS----------
T ss_pred cccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-------------eEEEccCCCCCccEEecCCc----------
Confidence 83 3 23344444 7889999999999999887653 79999998765433 32222
Q ss_pred CccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeee
Q 004456 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW 318 (752)
Q Consensus 239 ~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~ 318 (752)
..+..++|+|+|+. ++.+.. ....+.|.++|+ .++...........+..++|+|+++.|+....
T Consensus 260 ---~~v~~~~~~p~~~~-ll~~~~---------gs~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 260 ---AAVKAVAWCPWQSN-LLATGG---------GTMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHG 323 (401)
T ss_dssp ---SCCCEEEECTTSTT-EEEEEC---------CTTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred ---ceEEEEEECCCCCC-EEEEec---------CCCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEee
Confidence 22678999999998 655531 012447899998 44454444456677899999999999988652
Q ss_pred cccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeE
Q 004456 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLD 398 (752)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 398 (752)
.. .+.|.++++.++ ....+....... ...-.++|+|||++|+....+ ..|.
T Consensus 324 ~~--dg~i~v~~~~~~--~~~~~~~~~~h~----~~v~~~~~s~dg~~l~s~~~d---------------------g~i~ 374 (401)
T 4aez_A 324 FP--DNNLSIWSYSSS--GLTKQVDIPAHD----TRVLYSALSPDGRILSTAASD---------------------ENLK 374 (401)
T ss_dssp TT--TCEEEEEEEETT--EEEEEEEEECCS----SCCCEEEECTTSSEEEEECTT---------------------SEEE
T ss_pred cC--CCcEEEEecCCc--cceeEEEecCCC----CCEEEEEECCCCCEEEEEeCC---------------------CcEE
Confidence 22 235777776653 222222111111 022236799999998887632 1589
Q ss_pred EEecCCCce
Q 004456 399 LFDINTGSK 407 (752)
Q Consensus 399 ~~d~~~g~~ 407 (752)
+||+.+++.
T Consensus 375 iw~~~~~~~ 383 (401)
T 4aez_A 375 FWRVYDGDH 383 (401)
T ss_dssp EEECCC---
T ss_pred EEECCCCcc
Confidence 999988764
No 254
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.58 E-value=1e-14 Score=145.00 Aligned_cols=190 Identities=12% Similarity=0.072 Sum_probs=116.9
Q ss_pred e-EEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCch-hHHHHHHHHHHHHH
Q 004456 514 P-CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVE 591 (752)
Q Consensus 514 P-~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~~~ 591 (752)
| .||++||.+.. ...|. .+...|+ .+|.|++ .+.+|+|.+..... .... .++
T Consensus 13 ~~~vvllHG~~~~-----------~~~w~----~~~~~L~-~~~~vi~---~Dl~G~G~S~~~~~~~~~~-------~~~ 66 (258)
T 1m33_A 13 NVHLVLLHGWGLN-----------AEVWR----CIDEELS-SHFTLHL---VDLPGFGRSRGFGALSLAD-------MAE 66 (258)
T ss_dssp SSEEEEECCTTCC-----------GGGGG----GTHHHHH-TTSEEEE---ECCTTSTTCCSCCCCCHHH-------HHH
T ss_pred CCeEEEECCCCCC-----------hHHHH----HHHHHhh-cCcEEEE---eeCCCCCCCCCCCCcCHHH-------HHH
Confidence 5 89999996421 11222 3344554 6899999 56678877754321 1222 223
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-cc-Ccccc--------c-----------
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PF-GFQTE--------F----------- 650 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~-~~-~~~~~--------~----------- 650 (752)
.+.+. ++ +++.|+||||||.+|+.+|.++|++++++|++++....... .+ ..... .
T Consensus 67 ~l~~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
T 1m33_A 67 AVLQQ--AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERF 143 (258)
T ss_dssp HHHTT--SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHH
Confidence 33332 33 78999999999999999999999999999998764221100 00 00000 0
Q ss_pred ------c--chhhhHHH----------------------HHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHH
Q 004456 651 ------R--TLWEATNV----------------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 700 (752)
Q Consensus 651 ------~--~~~~~~~~----------------------~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 700 (752)
. ........ +...+....+.++++|+|+++|++|..+| ...++.+.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~ 221 (258)
T 1m33_A 144 LALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKL 221 (258)
T ss_dssp HHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTT
T ss_pred HHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHh
Confidence 0 00000000 00111122356688999999999999998 6655444333
Q ss_pred HHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 701 LKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 701 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
+ ...++++++++||... .+.++.+.+.+.+||.+
T Consensus 222 ~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 222 W----PHSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR 255 (258)
T ss_dssp C----TTCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred C----ccceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 2 3468999999999865 45678888899999864
No 255
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.58 E-value=1.2e-14 Score=156.93 Aligned_cols=69 Identities=19% Similarity=0.107 Sum_probs=55.5
Q ss_pred hhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 666 ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 666 ~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
...+.++++|+|+++|++|.++| +..++++.+.+. ..++++++ ++||... .+.++.+.+.+.+||++++
T Consensus 374 ~~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~p----~~~~~~i~~~~GH~~~-~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 374 PEALAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHTC--
T ss_pred HHHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHCC----CcEEEEeCCCCCcchH-HhCHHHHHHHHHHHHHHhc
Confidence 34467889999999999999999 888877777653 46899999 8999865 4557888899999998765
No 256
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.58 E-value=2.4e-14 Score=142.21 Aligned_cols=198 Identities=8% Similarity=-0.003 Sum_probs=125.8
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ...| ..+...|+++||.|++ .+.+|+|.+.... .......+|+.+.
T Consensus 3 ~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 64 (257)
T 3c6x_A 3 FAHFVLIHTICHG-----------AWIW----HKLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTF 64 (257)
T ss_dssp CCEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHH
T ss_pred CCcEEEEcCCccC-----------cCCH----HHHHHHHHhCCCEEEE---eCCCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 3679999996311 1112 2456778889999999 6677888774421 2345555665555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC-CCCCcc-----------Ccccc--------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-KTLTPF-----------GFQTE-------- 649 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~-~~~~~~-----------~~~~~-------- 649 (752)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++... ...... .+...
T Consensus 65 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (257)
T 3c6x_A 65 LEAL---PP--GEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKD 139 (257)
T ss_dssp HHTS---CT--TCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEET
T ss_pred HHhc---cc--cCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCC
Confidence 5443 11 25899999999999999999999999999999876421 000000 00000
Q ss_pred ----c---cch-h-----------hhHHHHHh-cCh--h--------hhc--CC-CCCCEEEEEeCCCCCCCCCHHHHHH
Q 004456 650 ----F---RTL-W-----------EATNVYIE-MSP--I--------THA--NK-IKKPILIIHGEVDDKVGLFPMQAER 696 (752)
Q Consensus 650 ----~---~~~-~-----------~~~~~~~~-~~~--~--------~~~--~~-~~~P~li~~G~~D~~v~~~~~~~~~ 696 (752)
. ... + ........ ..+ . ... .. .++|+|+++|++|..+| +..++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~ 217 (257)
T 3c6x_A 140 GKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLW 217 (257)
T ss_dssp TEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHH
T ss_pred CCccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHH
Confidence 0 000 0 00000000 000 0 000 11 25899999999999998 888777
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 697 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
+.+.+. ..+++++|++||... .+.++.+.+.+.+|+++.
T Consensus 218 ~~~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 218 QIENYK----PDKVYKVEGGDHKLQ-LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHHSC----CSEEEECCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHCC----CCeEEEeCCCCCCcc-cCCHHHHHHHHHHHHHhc
Confidence 766653 348999999999865 677888999999998753
No 257
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.57 E-value=1.7e-13 Score=142.23 Aligned_cols=232 Identities=8% Similarity=0.050 Sum_probs=144.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+||||++ |+.. ...+.|.|+++++++...............+..++|+|||++|+..+.+
T Consensus 84 ~v~~~~~s~d~~-l~~~----------s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---- 148 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVA----------SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---- 148 (344)
T ss_dssp CEEEEEEETTTE-EEEE----------ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEeCCCe-EEEE----------ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 377899999974 5443 3346788889988775432211000011147788999999998876431
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.|.++|+ +|+ ...+..+ ..+..+.|+|||+.
T Consensus 149 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 149 ---------------------------------------------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 57888998 664 4455555 78889999999987
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
++++.... +.|.+||+.+++.......... ...+..++|+|++.. ++.+..
T Consensus 184 ~l~s~s~D------------~~v~iwd~~~~~~~~~~~~~~~----------~~~~~~~~~~p~~~~-~l~sg~------ 234 (344)
T 4gqb_B 184 VFLSCSED------------NRILLWDTRCPKPASQIGCSAP----------GYLPTSLAWHPQQSE-VFVFGD------ 234 (344)
T ss_dssp EEEEEETT------------SCEEEEETTSSSCEEECC--------------CCCEEEEEECSSCTT-EEEEEE------
T ss_pred ceeeeccc------------cccccccccccceeeeeeccee----------eccceeeeecCCCCc-ceEEec------
Confidence 76654432 3799999987654332211111 012457899998876 444321
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccccc
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 348 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 348 (752)
..+.|.+||+. .+.....+......+..++|||||..++.+...+ ..|.++|+.++ +...+..+ ...
T Consensus 235 -----~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D---~~i~vwd~~~~--~~~~~~~H-~~~ 301 (344)
T 4gqb_B 235 -----ENGTVSLVDTK--STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED---CSLAVLDSSLS--ELFRSQAH-RDF 301 (344)
T ss_dssp -----TTSEEEEEESC--C--CCEEEECCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTCC--EEEEECCC-SSC
T ss_pred -----cCCcEEEEECC--CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC---CeEEEEECCCC--cEEEEcCC-CCC
Confidence 33478899984 3444556666677889999999996544433222 34888888774 32222211 111
Q ss_pred ccCCCCCCceeeCCCCCeEEEee
Q 004456 349 VYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 349 ~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.-.++|||+|++|+.+.
T Consensus 302 ------V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 302 ------VRDATWSPLNHSLLTTV 318 (344)
T ss_dssp ------EEEEEECSSSTTEEEEE
T ss_pred ------EEEEEEeCCCCeEEEEE
Confidence 12377999998876554
No 258
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.57 E-value=4.7e-14 Score=144.83 Aligned_cols=213 Identities=16% Similarity=0.110 Sum_probs=135.1
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|..+.+...-+ ++.|.||++||.+... ..|. .....|+ ..|.|++ .|.+|+|
T Consensus 15 ~g~~l~y~~~G~--------g~~~pvvllHG~~~~~-----------~~w~----~~~~~L~-~~~~via---~Dl~G~G 67 (316)
T 3afi_E 15 LGSSMAYRETGA--------QDAPVVLFLHGNPTSS-----------HIWR----NILPLVS-PVAHCIA---PDLIGFG 67 (316)
T ss_dssp TTEEEEEEEESC--------TTSCEEEEECCTTCCG-----------GGGT----TTHHHHT-TTSEEEE---ECCTTST
T ss_pred CCEEEEEEEeCC--------CCCCeEEEECCCCCch-----------HHHH----HHHHHHh-hCCEEEE---ECCCCCC
Confidence 566776655421 1235899999964211 1222 2344555 4599999 6677888
Q ss_pred CCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC---CCCCc--
Q 004456 571 DKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN---KTLTP-- 643 (752)
Q Consensus 571 ~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~---~~~~~-- 643 (752)
.+..+. .......+|+.+.++.+ + .+++.|+||||||.+|+.+|.++|++++++|++++... .....
T Consensus 68 ~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 141 (316)
T 3afi_E 68 QSGKPDIAYRFFDHVRYLDAFIEQR---G---VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHT 141 (316)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHT---T---CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc---C---CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccch
Confidence 775432 23556666666666554 2 36899999999999999999999999999999886321 00000
Q ss_pred ------------------cCccc-----------------c--ccchh--hhHHHHHh-----------------cC---
Q 004456 644 ------------------FGFQT-----------------E--FRTLW--EATNVYIE-----------------MS--- 664 (752)
Q Consensus 644 ------------------~~~~~-----------------~--~~~~~--~~~~~~~~-----------------~~--- 664 (752)
+.... . ..... +....+.. ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (316)
T 3afi_E 142 EVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAG 221 (316)
T ss_dssp CCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTT
T ss_pred hhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccc
Confidence 00000 0 00000 00001100 00
Q ss_pred -----------hhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHH
Q 004456 665 -----------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 733 (752)
Q Consensus 665 -----------~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 733 (752)
....++++++|+|+++|++|..+| ...++.+.+.+ ...++++++++||... .+.++.+.+.+
T Consensus 222 ~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~GH~~~-~e~p~~~~~~i 294 (316)
T 3afi_E 222 EPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASL----TRCALIRLGAGLHYLQ-EDHADAIGRSV 294 (316)
T ss_dssp BSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHS----SSEEEEEEEEECSCHH-HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhC----CCCeEEEcCCCCCCch-hhCHHHHHHHH
Confidence 001123578999999999999998 77777666554 3468999999999865 56688899999
Q ss_pred HHHHHHHhcC
Q 004456 734 DRWLQKYCLS 743 (752)
Q Consensus 734 ~~fl~~~l~~ 743 (752)
.+||.+....
T Consensus 295 ~~fl~~~~~~ 304 (316)
T 3afi_E 295 AGWIAGIEAV 304 (316)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHhhcCCC
Confidence 9999887643
No 259
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.57 E-value=6.1e-13 Score=139.42 Aligned_cols=296 Identities=12% Similarity=0.043 Sum_probs=157.4
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
.-.+|.++.++|+.++++.. . ......++|||||+.|++........
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~-~---~~~p~~l~~spdg~~l~~~~~~~~~~----------------------------- 74 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDA-E---VANPSYLIPSADGKFVYSVNEFSKDQ----------------------------- 74 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEE-E---CSCCCSEEECTTSSEEEEEECCSSTT-----------------------------
T ss_pred CEEEEEEeCCCCCEEEeecc-c---CCCCceEEECCCCCEEEEEEccCCCC-----------------------------
Confidence 34455556677887776543 1 11345789999999998875421110
Q ss_pred ccCChhhhhhhhhhcccEEEEEccC-CCccccCCc----cceeccccCCCCceEEEEecccCccccccccCccccEEEEe
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~-G~~~~l~~~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (752)
..-.+|.++.+ |+.+.+... .....+++ ||++|++..... ..+.+|+
T Consensus 75 --------------~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~------------~~v~~~~ 126 (361)
T 3scy_A 75 --------------AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG------------GSITVFP 126 (361)
T ss_dssp --------------CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT------------TEEEEEE
T ss_pred --------------CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC------------CEEEEEE
Confidence 11344555553 665555322 33445555 999998876443 4788888
Q ss_pred cCCc-eeEEecC---CCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCC--
Q 004456 216 TDGK-LVRELCD---LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-- 289 (752)
Q Consensus 216 ~~~~-~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 289 (752)
++.. ....+.. .... .+.........+..++|+|||++ |++... ..+.+.+++++. .++
T Consensus 127 ~~~~g~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~spdg~~-l~~~~~-----------~~~~v~v~~~~~-~~~~~ 191 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGS--GPDKERQTMPHLHCVRITPDGKY-LLADDL-----------GTDQIHKFNINP-NANAD 191 (361)
T ss_dssp BCTTSCBCSCSEEEECCCC--CSCTTTCSSCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEEECT-TCCTT
T ss_pred eCCCCcCcccceeEEccCC--CCCccccCCCcceEEEECCCCCE-EEEEeC-----------CCCEEEEEEEcC-CCCcc
Confidence 8633 2211110 1110 01000001112356899999997 666642 233566665521 222
Q ss_pred --C-Ce------EE-eecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCcee
Q 004456 290 --K-PE------IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMT 359 (752)
Q Consensus 290 --~-~~------~l-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 359 (752)
+ .. .+ .........++|||||+.+++..... ..|.++++.++ ....+........ .....-.++
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~~~~~g--~~~~~~~~~~~~~-~~~~~~~i~ 265 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG---GTVIAFRYADG--MLDEIQTVAADTV-NAQGSGDIH 265 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT---CEEEEEEEETT--EEEEEEEEESCSS-CCCCEEEEE
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC---CeEEEEEecCC--ceEEeEEEecCCC-CCCCcccEE
Confidence 1 21 11 22334467799999999887765222 34667776653 2222221111000 000111367
Q ss_pred eCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEec--CCCceeEEeeccchhhhhceeeeecCCcceecccC
Q 004456 360 RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI--NTGSKERIWESNREKYFETAVALVFGQGEEDINLN 437 (752)
Q Consensus 360 ~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d 437 (752)
|||||++|++.... ....|.+|++ .+|+.+.+...... .....++||||
T Consensus 266 ~spdg~~l~v~~~~-------------------~~~~i~v~~~~~~~g~~~~~~~~~~g----------~~~~~~~~spd 316 (361)
T 3scy_A 266 LSPDGKYLYASNRL-------------------KADGVAIFKVDETNGTLTKVGYQLTG----------IHPRNFIITPN 316 (361)
T ss_dssp ECTTSSEEEEEECS-------------------SSCEEEEEEECTTTCCEEEEEEEECS----------SCCCEEEECTT
T ss_pred ECCCCCEEEEECCC-------------------CCCEEEEEEEcCCCCcEEEeeEecCC----------CCCceEEECCC
Confidence 99999998776521 0123556555 56776555322111 11224689999
Q ss_pred CCEEEEEEecCCCCcEEEEEECCCCCeeEee
Q 004456 438 QLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (752)
Q Consensus 438 ~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt 468 (752)
|++|++...... .-.+|.+|..+|+.+.+.
T Consensus 317 g~~l~~~~~~~~-~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 317 GKYLLVACRDTN-VIQIFERDQATGLLTDIK 346 (361)
T ss_dssp SCEEEEEETTTT-EEEEEEECTTTCCEEECS
T ss_pred CCEEEEEECCCC-CEEEEEEECCCCcEeecc
Confidence 998877653332 334666888888877653
No 260
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.57 E-value=3.7e-14 Score=146.41 Aligned_cols=219 Identities=11% Similarity=0.087 Sum_probs=130.2
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecC
Q 004456 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (752)
Q Consensus 483 ~~~~~~~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (752)
+.+.+.. + ..+....+.|.+ ...|+||++||.+.. ...+ .+...++..| +.||.|++++
T Consensus 16 ~~~~~~~-~-~~~~y~~~g~~~------~~~~~vvllHG~~~~-----------~~~~-~~~~~l~~~L-~~g~~Vi~~D 74 (335)
T 2q0x_A 16 HLFTYYK-D-PYCKIPVFMMNM------DARRCVLWVGGQTES-----------LLSF-DYFTNLAEEL-QGDWAFVQVE 74 (335)
T ss_dssp EEEEEEE-E-TTEEEEEEEECT------TSSSEEEEECCTTCC-----------TTCS-TTHHHHHHHH-TTTCEEEEEC
T ss_pred EEEecCC-C-CceeEEEeccCC------CCCcEEEEECCCCcc-----------ccch-hHHHHHHHHH-HCCcEEEEEe
Confidence 3444443 2 456665555321 125889999995311 0111 1111234455 7899999954
Q ss_pred CC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH--hCCCceeEEEEccCCCCC
Q 004456 563 SI-PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA--HAPHLFCCGIARSGSYNK 639 (752)
Q Consensus 563 ~~-~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~--~~p~~~~~~v~~~~~~~~ 639 (752)
.+ +.+|+|.+. ......|+.++++++.+. .+.+++.|+||||||.+|+.++. .+|++++++|+.+|..+.
T Consensus 75 l~~D~~G~G~S~-----~~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~ 147 (335)
T 2q0x_A 75 VPSGKIGSGPQD-----HAHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDP 147 (335)
T ss_dssp CGGGBTTSCSCC-----HHHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCT
T ss_pred ccCCCCCCCCcc-----ccCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccc
Confidence 32 457887762 234567888888888774 34578999999999999999998 478999999999876432
Q ss_pred CCCccCc---c-------------------c---cccchhhhHHHHH-------------------hcChhhhcCCCCCC
Q 004456 640 TLTPFGF---Q-------------------T---EFRTLWEATNVYI-------------------EMSPITHANKIKKP 675 (752)
Q Consensus 640 ~~~~~~~---~-------------------~---~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~P 675 (752)
....... . . ...... ....+. ..+....+.++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 226 (335)
T 2q0x_A 148 ENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHYDIPI-TPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVP 226 (335)
T ss_dssp TSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTTCSSCC-CHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSC
T ss_pred hhcccCHHHHHHHHHHHHHHhhccCccccccchhhccCcc-CHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCC
Confidence 2000000 0 0 000000 000000 00112346778999
Q ss_pred EEEEEeCCCCCCCCCHHH-HHHHHHHHHhCCCcEE--------E-----EEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 676 ILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSR--------L-----VLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 676 ~li~~G~~D~~v~~~~~~-~~~~~~~l~~~~~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
+|+++|++|.++| +.. ...+.+.+.+.-...+ + +++|++|| +..+.+.+||.+..
T Consensus 227 tLvi~G~~D~~vp--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 227 LLLMLAHNVQYKP--SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp EEEEEECCTTCCC--CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCC--hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 9999999999998 653 2233344433212223 5 78999999 23778899997754
No 261
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.57 E-value=9.3e-13 Score=139.89 Aligned_cols=249 Identities=11% Similarity=-0.020 Sum_probs=156.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc-------ceeccCCCCccccccccceEEecC----C--
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNN----S-- 98 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~-------~~~lt~~~~~~~~~~~~~~~wspd----g-- 98 (752)
.+...+|+| ++|+.. .....|+++++++++ ...+..+.. .+..+.|+|+ |
T Consensus 18 ~i~~~~~~~--~~l~s~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSC----------SGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp CEEEEEECS--SEEEEE----------ETTSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred CeEEEEecC--CeEEEE----------cCCCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 588899999 677665 334789999999887 344432222 4678899999 9
Q ss_pred -cEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC------ccc
Q 004456 99 -TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT------AKD 170 (752)
Q Consensus 99 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~------~~~ 170 (752)
+.|+..+.+ +.|+++++ +++ ...
T Consensus 81 ~~~l~s~~~d-------------------------------------------------g~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTSFS-------------------------------------------------GDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEETT-------------------------------------------------SCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEcCC-------------------------------------------------CCEEEEEccCCccccccccee
Confidence 888776321 46777887 443 444
Q ss_pred cCCc------cceeccccC----CCCce-EEEEecccCccccccccCccccEEEEecCC------cee-E-----EecCC
Q 004456 171 FGTP------AVYTAVEPS----PDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLV-R-----ELCDL 227 (752)
Q Consensus 171 l~~~------~~~~~~~~S----pDGk~-l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~~~-~-----~l~~~ 227 (752)
+..+ ..+..+.|+ |||+. |+....+ +.+.+||+.. ... . .+...
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 4443 667899999 99999 7776555 3789998876 321 1 11100
Q ss_pred CCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE-Eee---c---ccc
Q 004456 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK---L---DLR 300 (752)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~---~---~~~ 300 (752)
..........+..+.|+|+| . |+... ..+.+.++|+ ....... +.. . ...
T Consensus 179 ------~~~~~~~~~~i~~~~~~~~~-~-l~~~~------------~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 179 ------VESPMTPSQFATSVDISERG-L-IATGF------------NNGTVQISEL---STLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp ------ECCSSSSCCCCCEEEECTTS-E-EEEEC------------TTSEEEEEET---TTTEEEEEEECCC---CCCCC
T ss_pred ------eccccCCCCCceEEEECCCc-e-EEEEe------------CCCcEEEEEC---CCCceeEEEeccccccccCCc
Confidence 00001112336789999999 5 66553 3457899998 3333333 333 3 677
Q ss_pred eeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccc-------------ccccccCCCCCCceeeCCCCCeE
Q 004456 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-------------VFENVYSDPGSPMMTRTSTGTNV 367 (752)
Q Consensus 301 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~p~~~~s~dg~~l 367 (752)
+..++|+||++.|+..... +....|.++++.++ +....... ... ....++|+|+|++|
T Consensus 236 i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDS-NSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSS------WVMSLSFNDSGETL 306 (397)
T ss_dssp EEEEEECSSTTEEEEEEEE-TTEEEEEEEETTTC--CEEEEECBC--------CCBSBSS------CEEEEEECSSSSEE
T ss_pred cceEEECCCCCEEEEEecC-CCCceEEEEECCCC--cccceeccCcccccccccccccCC------cEEEEEECCCCCEE
Confidence 8999999999998887633 12257999998774 22222221 111 11236799999998
Q ss_pred EEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEee
Q 004456 368 IAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (752)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (752)
+....+ ..|.+||+.+++......
T Consensus 307 ~~~~~d---------------------g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 307 CSAGWD---------------------GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEETT---------------------SEEEEEETTTTEEEEEEE
T ss_pred EEEeCC---------------------CeEEEEEcCCCceeEEEe
Confidence 877632 158999998887655544
No 262
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.57 E-value=2.1e-13 Score=143.33 Aligned_cols=225 Identities=14% Similarity=0.056 Sum_probs=145.4
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc---ceeccCCCCccccccccceEEecCCcEEEEEecCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~---~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~ 108 (752)
.+...+|||||++||.. .....|+++++++++ .+.+..+.. .+..+.|+||++.|+..+.+
T Consensus 10 ~i~~~~~s~~~~~l~~~----------~~d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d- 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAIC----------PNNHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCGTD- 73 (372)
T ss_dssp CCCEEEECTTSSEEEEE----------CSSSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEETT-
T ss_pred CeEEEEECCCCCEEEEE----------eCCCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEcCC-
Confidence 48889999999999985 334789999998885 344432222 46788999999988876321
Q ss_pred CCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc---cccCCc-cceeccccC
Q 004456 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPS 183 (752)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~---~~l~~~-~~~~~~~~S 183 (752)
+.|.++++ +++. ..+..+ ..+..+.|+
T Consensus 74 ------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 74 ------------------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ------------------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ------------------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 46788888 5542 222333 778899999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecCCcee----EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEE
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV----RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~ 259 (752)
|||+.|+....+. .+.+|+++.+.. ..+... ....+..+.|+|||+. |+.
T Consensus 106 ~~~~~l~~~~~d~-------------~v~i~d~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~-l~~ 159 (372)
T 1k8k_C 106 PNEKKFAVGSGSR-------------VISICYFEQENDWWVCKHIKKP------------IRSTVLSLDWHPNSVL-LAA 159 (372)
T ss_dssp TTSSEEEEEETTS-------------SEEEEEEETTTTEEEEEEECTT------------CCSCEEEEEECTTSSE-EEE
T ss_pred CCCCEEEEEeCCC-------------EEEEEEecCCCcceeeeeeecc------------cCCCeeEEEEcCCCCE-EEE
Confidence 9999999886553 788888876542 222111 1123678999999986 554
Q ss_pred EEeccCCCCccccCccceEEeccCCCC---------------C-CCCCeEEeecccceeeeeeecCCceEEEeeecccCc
Q 004456 260 VEAQDRGDANVEVSPRDIIYTQPAEPA---------------E-GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (752)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------~-~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 323 (752)
.. ..+.+.++|+... . +.....+......+..++|+||++.|+... ..
T Consensus 160 ~~------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d 223 (372)
T 1k8k_C 160 GS------------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS----HD 223 (372)
T ss_dssp EE------------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE----TT
T ss_pred Ec------------CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe----CC
Confidence 43 2346777775200 1 112222334456688999999999888876 33
Q ss_pred eeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEe
Q 004456 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (752)
Q Consensus 324 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~ 370 (752)
..|.++++.++ +.......... ....++|+|+|++|+..
T Consensus 224 ~~i~i~d~~~~--~~~~~~~~~~~------~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 224 STVCLADADKK--MAVATLASETL------PLLAVTFITESSLVAAG 262 (372)
T ss_dssp TEEEEEEGGGT--TEEEEEECSSC------CEEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCC--ceeEEEccCCC------CeEEEEEecCCCEEEEE
Confidence 45888888764 22222221111 11126799999877655
No 263
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.57 E-value=3.1e-14 Score=141.87 Aligned_cols=210 Identities=15% Similarity=0.105 Sum_probs=127.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+|.++....+-+++ .|+||++||.+... ..| ......| +.+|.|++ .+.+|+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~~~-----------~~~----~~~~~~L-~~~~~v~~---~D~~G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQDH-----------RLF----KNLAPLL-ARDFHVIC---PDWRGHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTCCG-----------GGG----TTHHHHH-TTTSEEEE---ECCTTCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCCcH-----------hHH----HHHHHHH-HhcCcEEE---EccccCC
Confidence 56666666554322 58999999964221 112 1344555 45699999 5566777
Q ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC------
Q 004456 571 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL------ 641 (752)
Q Consensus 571 ~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~------ 641 (752)
.+... ........+|+.++++.+ +.+++.|+||||||.+++.++.++ |++++++|++++......
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~ 133 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQL 133 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchh
Confidence 76542 234556667776666554 235899999999999999999999 999999999997651000
Q ss_pred ----CccCccc-----------cccch-----------hhhHHHHH------------hcChhhhcCCCCCCEEEEEeCC
Q 004456 642 ----TPFGFQT-----------EFRTL-----------WEATNVYI------------EMSPITHANKIKKPILIIHGEV 683 (752)
Q Consensus 642 ----~~~~~~~-----------~~~~~-----------~~~~~~~~------------~~~~~~~~~~~~~P~li~~G~~ 683 (752)
....+.. ..... ......+. ..++...+.++++|+|++||..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~ 213 (264)
T 3ibt_A 134 AEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYS 213 (264)
T ss_dssp HHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEEC
T ss_pred hcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecC
Confidence 0000000 00000 00000000 0112245678899999998755
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 684 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 684 D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
|...+.+....+ .+.+.-...++++++++||... .+.++.+.+.+.+||+
T Consensus 214 ~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 214 QPLSQDYRQLQL----EFAAGHSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CSCCHHHHHHHH----HHHHHCTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CccchhhHHHHH----HHHHhCCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 443320022233 3333334579999999999755 5667888888888875
No 264
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.56 E-value=2.2e-14 Score=146.14 Aligned_cols=210 Identities=10% Similarity=-0.052 Sum_probs=133.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+....+- +.|+||++||.+... ..|. .+...|++ .|.|++ .+.+|+
T Consensus 16 ~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~-~~~vi~---~D~~G~ 66 (302)
T 1mj5_A 16 IKGRRMAYIDEG----------TGDPILFQHGNPTSS-----------YLWR----NIMPHCAG-LGRLIA---CDLIGM 66 (302)
T ss_dssp ETTEEEEEEEES----------CSSEEEEECCTTCCG-----------GGGT----TTGGGGTT-SSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC----------CCCEEEEECCCCCch-----------hhhH----HHHHHhcc-CCeEEE---EcCCCC
Confidence 467777766542 148899999964221 1222 22334444 479999 455677
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004456 570 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 642 (752)
Q Consensus 570 g~~~~~~------~~~~~~~~d~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~ 642 (752)
|.+.... .......+|+.++++.+ +. .+++|+||||||.+++.++.++|++++++|+++|.......
T Consensus 67 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (302)
T 1mj5_A 67 GDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEW 140 (302)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCG
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhh
Confidence 7664432 23556666666666554 23 68999999999999999999999999999999986531100
Q ss_pred c-cC--c---------cc----------c----------ccchhhhHHHHH------------------h----------
Q 004456 643 P-FG--F---------QT----------E----------FRTLWEATNVYI------------------E---------- 662 (752)
Q Consensus 643 ~-~~--~---------~~----------~----------~~~~~~~~~~~~------------------~---------- 662 (752)
. .. . .. . ..........+. .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (302)
T 1mj5_A 141 ADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV 220 (302)
T ss_dssp GGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHH
T ss_pred hhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhh
Confidence 0 00 0 00 0 000000000000 0
Q ss_pred ----cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 663 ----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 663 ----~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
.+....+.++++|+|+++|++|.++| +..++.+.+.+ .. +++++ ++||... .+.++.+.+.+.+|+.
T Consensus 221 ~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~fl~ 291 (302)
T 1mj5_A 221 VAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAAFVR 291 (302)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHHHHH
Confidence 01123456789999999999999998 77665554433 34 88889 9999865 5668899999999999
Q ss_pred HHhcC
Q 004456 739 KYCLS 743 (752)
Q Consensus 739 ~~l~~ 743 (752)
+....
T Consensus 292 ~~~~~ 296 (302)
T 1mj5_A 292 RLRPA 296 (302)
T ss_dssp HHSCC
T ss_pred hhccc
Confidence 87654
No 265
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.56 E-value=1.1e-13 Score=144.72 Aligned_cols=232 Identities=7% Similarity=0.042 Sum_probs=138.7
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||+.|+- .....|.++++.+++...+...........+..++|+|||+.|+..+.+
T Consensus 96 ~V~~~~~s~d~~~l~~-----------s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---- 160 (357)
T 4g56_B 96 GVTDVAWVSEKGILVA-----------SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---- 160 (357)
T ss_dssp CEEEEEEETTTEEEEE-----------ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEEE-----------ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 4888999999987654 2235788888887765433211110111246788999999998876321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.|.++|+ +++ ...+..+ ..+..++|+|+++.
T Consensus 161 ---------------------------------------------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 161 ---------------------------------------------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 57888898 663 3444444 77889999999986
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
++++.... +.|.+||+.+++......... ....+..++|+|++.. ++.+..
T Consensus 196 ~~~s~~~d------------g~v~~wd~~~~~~~~~~~~~~----------~~~~v~~v~~sp~~~~-~la~g~------ 246 (357)
T 4g56_B 196 IFLSCGED------------GRILLWDTRKPKPATRIDFCA----------SDTIPTSVTWHPEKDD-TFACGD------ 246 (357)
T ss_dssp CEEEEETT------------SCEEECCTTSSSCBCBCCCTT----------CCSCEEEEEECTTSTT-EEEEEE------
T ss_pred eeeeeccC------------CceEEEECCCCceeeeeeecc----------ccccccchhhhhcccc-eEEEee------
Confidence 65554432 379999988664332221111 1122567899999877 444431
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccccc
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 348 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 348 (752)
..+.|.++|+. .+...+.+......+..++||||+..++.+...+ ..|+++|+.++ +......+. .
T Consensus 247 -----~d~~i~~wd~~--~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D---~~i~iwd~~~~--~~~~~~~H~-~- 312 (357)
T 4g56_B 247 -----ETGNVSLVNIK--NPDSAQTSAVHSQNITGLAYSYHSSPFLASISED---CTVAVLDADFS--EVFRDLSHR-D- 312 (357)
T ss_dssp -----SSSCEEEEESS--CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT---SCEEEECTTSC--EEEEECCCS-S-
T ss_pred -----cccceeEEECC--CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC---CEEEEEECCCC--cEeEECCCC-C-
Confidence 23468888883 2334455555667789999999986554433222 35888898874 322222111 1
Q ss_pred ccCCCCCCceeeCC-CCCeEEEee
Q 004456 349 VYSDPGSPMMTRTS-TGTNVIAKI 371 (752)
Q Consensus 349 ~~~~~~~p~~~~s~-dg~~l~~~~ 371 (752)
..-.++||| |+++|+..+
T Consensus 313 -----~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 313 -----FVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp -----CEEEEEECSSSTTEEEEEE
T ss_pred -----CEEEEEEeCCCCCEEEEEc
Confidence 112367998 788887766
No 266
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.56 E-value=1.4e-13 Score=140.14 Aligned_cols=208 Identities=16% Similarity=0.069 Sum_probs=132.5
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+....+- ..|.||++||.+... ..|. .+...|+++ |.|++ .+.+|+
T Consensus 17 ~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~~-~~vi~---~D~~G~ 67 (301)
T 3kda_A 17 VDGVKLHYVKGG----------QGPLVMLVHGFGQTW-----------YEWH----QLMPELAKR-FTVIA---PDLPGL 67 (301)
T ss_dssp ETTEEEEEEEEE----------SSSEEEEECCTTCCG-----------GGGT----TTHHHHTTT-SEEEE---ECCTTS
T ss_pred eCCeEEEEEEcC----------CCCEEEEECCCCcch-----------hHHH----HHHHHHHhc-CeEEE---EcCCCC
Confidence 377788876653 147999999974211 2222 346667777 99999 556677
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc--
Q 004456 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-- 644 (752)
Q Consensus 570 g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-- 644 (752)
|.+... ........+|+.++++.+ +.++ +.|+||||||.+++.++.++|++++++|++++.........
T Consensus 68 G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (301)
T 3kda_A 68 GQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFP 141 (301)
T ss_dssp TTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSB
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchh
Confidence 776443 234556677777777666 2346 99999999999999999999999999999998532100000
Q ss_pred ---------Cc--------cccc---------------------cc---hhhhHHHHHh-c-------------------
Q 004456 645 ---------GF--------QTEF---------------------RT---LWEATNVYIE-M------------------- 663 (752)
Q Consensus 645 ---------~~--------~~~~---------------------~~---~~~~~~~~~~-~------------------- 663 (752)
.+ .... .. .......+.. .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (301)
T 3kda_A 142 AFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNES 221 (301)
T ss_dssp SEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHH
T ss_pred hhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccc
Confidence 00 0000 00 0000000000 0
Q ss_pred -----ChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 664 -----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 664 -----~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
.....+.++++|+|+++|++| ++ ......+ .+.-.++++++++++||... .+.++.+.+.+.+|+.
T Consensus 222 ~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l~ 292 (301)
T 3kda_A 222 VRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQM----KAYAEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFLS 292 (301)
T ss_dssp HHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHHH----HTTBSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHHT
T ss_pred hhhcccchhhccccCcceEEEecCCC--CC--hhHHHHH----HhhcccCeEEEcCCCCcCch-hhCHHHHHHHHHHHHh
Confidence 001112278899999999999 44 4544443 34445689999999999865 5668888888888887
Q ss_pred HHh
Q 004456 739 KYC 741 (752)
Q Consensus 739 ~~l 741 (752)
+.-
T Consensus 293 ~~~ 295 (301)
T 3kda_A 293 RGR 295 (301)
T ss_dssp TSC
T ss_pred hCc
Confidence 754
No 267
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.56 E-value=2.7e-13 Score=166.53 Aligned_cols=357 Identities=8% Similarity=-0.043 Sum_probs=207.6
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..+.++++.. +.............+....|||||+.++... ....|.+++++++..........
T Consensus 819 ~~v~~~d~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~dg~v~vwd~~~~~~~~~~~~h~-- 882 (1249)
T 3sfz_A 819 NKVLLFDIHT----SGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL----------SQYCVELWNIDSRLKVADCRGHL-- 882 (1249)
T ss_dssp TEEEEEETTT----CCEEEEEECSSSSCCCEEEECSSTTEEEEEC----------SSSCEEEEETTTTEEEEEECCCS--
T ss_pred CcEEEEEecC----CCceeEEcCCCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceeeecCCCc--
Confidence 3456666655 4433332122333688899999999998863 34678888988876544332221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCC-----CC-c-----------------------eec--cccccc-
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL-----GP-K-----------------------IQS--NEQKNI- 132 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~-----~~-~-----------------------~~~--~~~~~~- 132 (752)
..+..+.|+|||+.|+..+.+..-. .+.... .. . ... ...+..
T Consensus 883 --~~v~~v~~spdg~~l~s~s~dg~v~---vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 883 --SWVHGVMFSPDGSSFLTASDDQTIR---VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp --SCEEEEEECTTSSEEEEEETTSCEE---EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred --cceEEEEECCCCCEEEEEeCCCeEE---EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 1467889999999988775432111 000000 00 0 000 000000
Q ss_pred ccccchhhccCChhhhhhhh-hhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCceEEEEecccCccccccccCcc
Q 004456 133 IISRMTDNLLKDEYDESLFD-YYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFS 208 (752)
Q Consensus 133 ~~~~~~~~~~~~~~d~~~~~-~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~ 208 (752)
.........+.+++++..+. ....+.|+++++ +++ ...+..+ ..+..++|||||++|+..+.+
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d------------- 1024 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED------------- 1024 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------
Confidence 00000011122333332221 223467888888 563 3344444 788899999999999987655
Q ss_pred ccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCC
Q 004456 209 QKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG 288 (752)
Q Consensus 209 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (752)
+.+.+|++.+++...+.... ..+..+.|+|+++ ++..+ ..+.+.+||+. .+
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~--l~~~~------------~dg~v~vwd~~--~~ 1075 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQ-------------ETVKDFRLLQDSR--LLSWS------------FDGTVKVWNVI--TG 1075 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCS-------------SCEEEEEECSSSE--EEEEE------------SSSEEEEEETT--TT
T ss_pred CEEEEEECCCCceEEEecCC-------------CcEEEEEEcCCCc--EEEEE------------CCCcEEEEECC--CC
Confidence 37999999988766443322 2266899999886 44433 34478899983 33
Q ss_pred CCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEE
Q 004456 289 EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (752)
Q Consensus 289 ~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~ 368 (752)
.....+......+..++|||||+.|+.++. ...|.++++.++. ....+..+. . ....++|||||++|+
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~----d~~v~iwd~~~~~-~~~~l~~h~-~------~v~~~~~s~dg~~la 1143 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSA----DKTAKIWSFDLLS-PLHELKGHN-G------CVRCSAFSLDGILLA 1143 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECC----SSCCCEECSSSSS-CSBCCCCCS-S------CEEEEEECSSSSEEE
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCcc-eeeeeccCC-C------cEEEEEECCCCCEEE
Confidence 445556666777889999999999988762 3347777877641 111221111 1 111267999999998
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecC
Q 004456 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 448 (752)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~ 448 (752)
..+.+ | .|.+||+.+++.......... .............++|||||+.++...
T Consensus 1144 t~~~d-------------g--------~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~fs~dg~~l~s~~--- 1197 (1249)
T 3sfz_A 1144 TGDDN-------------G--------EIRIWNVSDGQLLHSCAPISV--EEGTATHGGWVTDVCFSPDSKTLVSAG--- 1197 (1249)
T ss_dssp EEETT-------------S--------CCCEEESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEES---
T ss_pred EEeCC-------------C--------EEEEEECCCCceEEEeccccc--cccccccCceEEEEEECCCCCEEEECC---
Confidence 87632 1 488999988875432210000 000011112233578999999987542
Q ss_pred CCCcEEEEEECCCCCee
Q 004456 449 TEITQYHILSWPLKKSS 465 (752)
Q Consensus 449 ~~~~~i~~~d~~~g~~~ 465 (752)
..|.+||+.+++..
T Consensus 1198 ---g~v~vwd~~~g~~~ 1211 (1249)
T 3sfz_A 1198 ---GYLKWWNVATGDSS 1211 (1249)
T ss_dssp ---SSEEEBCSSSCBCC
T ss_pred ---CeEEEEECCCCcee
Confidence 46999998887653
No 268
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.56 E-value=8.3e-14 Score=130.08 Aligned_cols=169 Identities=11% Similarity=-0.048 Sum_probs=111.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc---EEEecCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~ 589 (752)
.|.||++||.+.. ... +..++..|.++|| .|++ .+.+|+|.+.. .......+++.++
T Consensus 3 ~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~G~~~~~v~~---~d~~g~g~s~~--~~~~~~~~~~~~~ 62 (181)
T 1isp_A 3 HNPVVMVHGIGGA-----------SFN----FAGIKSYLVSQGWSRDKLYA---VDFWDKTGTNY--NNGPVLSRFVQKV 62 (181)
T ss_dssp CCCEEEECCTTCC-----------GGG----GHHHHHHHHHTTCCGGGEEE---CCCSCTTCCHH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCcCCC-----------HhH----HHHHHHHHHHcCCCCccEEE---EecCCCCCchh--hhHHHHHHHHHHH
Confidence 4789999996421 111 2246678889998 5888 44556655411 1222333333333
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhh
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPIT 667 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (752)
++.+ +.+++.++||||||.+++.++.+. |++++++|++++......... +. ..
T Consensus 63 ~~~~------~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~-~~--------------~~---- 117 (181)
T 1isp_A 63 LDET------GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA-LP--------------GT---- 117 (181)
T ss_dssp HHHH------CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC-CC--------------CS----
T ss_pred HHHc------CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc-CC--------------CC----
Confidence 3322 346899999999999999999987 889999999998643211000 00 00
Q ss_pred hcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 668 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 668 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
....++|+|+++|++|.++| +..++ -...+++++++++|...... . ++.+.+.+||.+.
T Consensus 118 -~~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 118 -DPNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGG 176 (181)
T ss_dssp -CTTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTT
T ss_pred -CCccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhccC-H-HHHHHHHHHHhcc
Confidence 01235799999999999998 66321 23468999999999876333 3 6888889998764
No 269
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.56 E-value=1.4e-12 Score=135.67 Aligned_cols=256 Identities=11% Similarity=0.091 Sum_probs=152.4
Q ss_pred cceeEEeecCCCCCCC----CceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-cc
Q 004456 4 FTGIGIHRLLPDDSLG----PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LF 78 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g----~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt 78 (752)
...|.++++......+ ..+.+.+. ...+...+|||||++|+..+ ....|.++++.+++... +.
T Consensus 48 D~~v~iWd~~~~~~~~~~~~~~~~l~~h--~~~V~~~~~~~~~~~l~s~s----------~D~~v~lwd~~~~~~~~~~~ 115 (343)
T 2xzm_R 48 DKTVMIWKLYEEEQNGYFGIPHKALTGH--NHFVSDLALSQENCFAISSS----------WDKTLRLWDLRTGTTYKRFV 115 (343)
T ss_dssp TSCEEEEEECSSCCSSBSEEEEEEECCC--SSCEEEEEECSSTTEEEEEE----------TTSEEEEEETTSSCEEEEEE
T ss_pred CCEEEEEECCcCCcccccccccchhccC--CCceEEEEECCCCCEEEEEc----------CCCcEEEEECCCCcEEEEEc
Confidence 3457777775421111 11223322 22588899999999998753 34789999998877543 43
Q ss_pred CCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
.+.. .+..+.|+|||+.|+..+.+ +.
T Consensus 116 ~h~~-----~v~~v~~sp~~~~l~s~~~d-------------------------------------------------~~ 141 (343)
T 2xzm_R 116 GHQS-----EVYSVAFSPDNRQILSAGAE-------------------------------------------------RE 141 (343)
T ss_dssp CCCS-----CEEEEEECSSTTEEEEEETT-------------------------------------------------SC
T ss_pred CCCC-----cEEEEEECCCCCEEEEEcCC-------------------------------------------------CE
Confidence 2222 46788999999988866321 56
Q ss_pred EEEEccCCC-ccccC---Cc-cceeccccCCCC----------ceEEEEecccCccccccccCccccEEEEecCCceeEE
Q 004456 159 LVLGSLDGT-AKDFG---TP-AVYTAVEPSPDQ----------KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (752)
Q Consensus 159 i~~~~~~G~-~~~l~---~~-~~~~~~~~SpDG----------k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 223 (752)
|.++++.+. ..... .+ ..+..+.|+|++ ++|+..+.+ +.|.+||........
T Consensus 142 i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~ 208 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-------------GRLKVWNTNFQIRYT 208 (343)
T ss_dssp EEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-------------SEEEEEETTTEEEEE
T ss_pred EEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-------------CEEEEEcCCCceeEE
Confidence 788887542 22221 22 567888999998 456555444 379999966554444
Q ss_pred ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceee
Q 004456 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRS 303 (752)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 303 (752)
+.... ..+..++|+|||+. |+..+ ..+.|.+||+. ..............+..
T Consensus 209 ~~~h~-------------~~v~~~~~s~~g~~-l~sgs------------~dg~v~iwd~~--~~~~~~~~~~~~~~v~~ 260 (343)
T 2xzm_R 209 FKAHE-------------SNVNHLSISPNGKY-IATGG------------KDKKLLIWDIL--NLTYPQREFDAGSTINQ 260 (343)
T ss_dssp EECCS-------------SCEEEEEECTTSSE-EEEEE------------TTCEEEEEESS--CCSSCSEEEECSSCEEE
T ss_pred EcCcc-------------ccceEEEECCCCCE-EEEEc------------CCCeEEEEECC--CCcccceeecCCCcEEE
Confidence 43332 22678999999997 55543 34478888873 12233333334556889
Q ss_pred eeeecCCceEEEeeecccCceeEEEEcCCCCCccce-ecccccccccc---C-CCCCCceeeCCCCCeEEEee
Q 004456 304 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRVFENVY---S-DPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 304 ~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~l~~~~~~~~~---~-~~~~p~~~~s~dg~~l~~~~ 371 (752)
++|+|+++.++.+. + ..+.++++.+...... .+......... . ....-.++|+|||++|+...
T Consensus 261 v~~sp~~~~la~~~--d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 261 IAFNPKLQWVAVGT--D---QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EEECSSSCEEEEEE--S---SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred EEECCCCCEEEEEC--C---CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 99999998776543 2 1366677665321110 11110000000 0 00112378999999998876
No 270
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.56 E-value=1.2e-12 Score=147.92 Aligned_cols=284 Identities=10% Similarity=0.082 Sum_probs=176.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccC----c-ceeccCCCCcccccc-ccceEEec--CCcEEEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----E-AKPLFESPDICLNAV-FGSFVWVN--NSTLLIF 103 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g----~-~~~lt~~~~~~~~~~-~~~~~wsp--dg~~l~~ 103 (752)
.+...+|||||++||+.. ...|.+++++++ + .+.+..+.. . +..+.|+| ||++|+.
T Consensus 20 ~v~~~~~spdg~~l~~~~-----------~~~v~v~~~~~~~~~~~~~~~~~~h~~-----~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-----------GKSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-----------TTEEEEEECCSSCCSSCSEEEECTTTT-----SCEEEEEECSSTTCCEEEE
T ss_pred ceeEEEECCCCCEEEEec-----------CCeEEEEECCCCCCccccceEEecCCC-----ceEEEEEECcCCCCCEEEE
Confidence 578899999999999963 358999999877 4 344433332 4 67889999 9999887
Q ss_pred EecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC--------C-ccccCC
Q 004456 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--------T-AKDFGT 173 (752)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G--------~-~~~l~~ 173 (752)
.+.+ +.|.+|++ +| + ...+..
T Consensus 84 ~~~d-------------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 84 GDES-------------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp EETT-------------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred ecCC-------------------------------------------------CEEEEEeCCCCcccccccccccchhhc
Confidence 6321 46777777 43 1 122222
Q ss_pred c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeC
Q 004456 174 P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (752)
Q Consensus 174 ~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspD 252 (752)
+ ..+..++|||||++|+......+. ...+++|+ .++....+.... ..+..+.|+|+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDN---------FGVFISWD-SGNSLGEVSGHS-------------QRINACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSC---------SEEEEETT-TCCEEEECCSCS-------------SCEEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCC---------ccEEEEEE-CCCcceeeecCC-------------ccEEEEEECCC
Confidence 3 678899999999999988755311 14688888 333334433222 23678999999
Q ss_pred CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEeeccc---ceeeeeeecC-CceEEEeeecccCceeEE
Q 004456 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDL---RFRSVSWCDD-SLALVNETWYKTSQTRTW 327 (752)
Q Consensus 253 G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~---~~~~~~~spD-g~~l~~~~~~~~~~~~l~ 327 (752)
|+..++... ..+.+.+|+. .... ...+..... .+..++|+|| ++.|+... ....|.
T Consensus 172 ~~~~l~~~~------------~d~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~ 232 (615)
T 1pgu_A 172 RPMRSMTVG------------DDGSVVFYQG---PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG----SDRKIS 232 (615)
T ss_dssp SSCEEEEEE------------TTTEEEEEET---TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE----TTCCEE
T ss_pred CCcEEEEEe------------CCCcEEEEeC---CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe----CCCeEE
Confidence 986244332 3447888887 3322 233444445 6889999999 99888876 334588
Q ss_pred EEcCCCCCccceecc-c---cccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecC
Q 004456 328 LVCPGSKDVAPRVLF-D---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 403 (752)
Q Consensus 328 ~~~~~~~~~~~~~l~-~---~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~ 403 (752)
++++.++ +..... . .... ....++|+ ++++|+....+ ..|.+||+.
T Consensus 233 vwd~~~~--~~~~~~~~~~~~~~~------~v~~~~~~-~~~~l~~~~~d---------------------~~i~~wd~~ 282 (615)
T 1pgu_A 233 CFDGKSG--EFLKYIEDDQEPVQG------GIFALSWL-DSQKFATVGAD---------------------ATIRVWDVT 282 (615)
T ss_dssp EEETTTC--CEEEECCBTTBCCCS------CEEEEEES-SSSEEEEEETT---------------------SEEEEEETT
T ss_pred EEECCCC--CEeEEecccccccCC------ceEEEEEc-CCCEEEEEcCC---------------------CcEEEEECC
Confidence 8888774 222222 1 1111 11236789 99988877632 158999998
Q ss_pred CCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCe
Q 004456 404 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (752)
Q Consensus 404 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~ 464 (752)
+++.................. +.++ +++.++.... ...|+++|+.+++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~----~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 283 TSKCVQKWTLDKQQLGNQQVG-------VVAT-GNGRIISLSL----DGTLNFYELGHDEV 331 (615)
T ss_dssp TTEEEEEEECCTTCGGGCEEE-------EEEE-ETTEEEEEET----TSCEEEEETTEEEE
T ss_pred CCcEEEEEcCCCCcccCceeE-------EEeC-CCCeEEEEEC----CCCEEEEECCCCcE
Confidence 887655444331100011111 2343 6776665543 23477888776443
No 271
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5.5e-15 Score=145.56 Aligned_cols=207 Identities=12% Similarity=0.051 Sum_probs=121.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC------C------------CCCCC--
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI------I------------GEGDK-- 572 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~------~------------g~g~~-- 572 (752)
.|.||++||.+.+. ..|......++..|.++||.|++++.... . |.|..
T Consensus 5 ~~~vl~lHG~g~~~-----------~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 73 (243)
T 1ycd_A 5 IPKLLFLHGFLQNG-----------KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRA 73 (243)
T ss_dssp CCEEEEECCTTCCH-----------HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEE
T ss_pred CceEEEeCCCCccH-----------HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcc
Confidence 68999999964221 11211111345566677999999554310 0 22221
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC------CceeEEEEccCCCCCCCCccCc
Q 004456 573 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNKTLTPFGF 646 (752)
Q Consensus 573 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p------~~~~~~v~~~~~~~~~~~~~~~ 646 (752)
.... .......|+.++++++.+....+..+++|+||||||.+|+.++.+.+ ..+++++.+++........ ..
T Consensus 74 w~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~ 151 (243)
T 1ycd_A 74 WFYH-SEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EH 151 (243)
T ss_dssp SSCC-CSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TS
T ss_pred cccC-CCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-cc
Confidence 0000 00012345555666655532223468999999999999999998642 2577888887764311000 00
Q ss_pred cccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCC---CcEEEEEeCCCCccCCcc
Q 004456 647 QTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG---ALSRLVLLPFEHHVYAAR 723 (752)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~ 723 (752)
... ..+.. .+ ........++++|+|++||++|.+|| +.+++++++.+...+ ......+++++||.+...
T Consensus 152 ~~~--~~~~~--~~--~~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~ 223 (243)
T 1ycd_A 152 PGE--LRITE--KF--RDSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK 223 (243)
T ss_dssp TTC--EEECG--GG--TTTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC
T ss_pred ccc--cccch--hH--HHhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch
Confidence 000 00000 00 01122345678999999999999999 999999999887641 111344566789986532
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 004456 724 ENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 724 ~~~~~~~~~~~~fl~~~l~~ 743 (752)
..+.+.+.+||++++..
T Consensus 224 ---~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 224 ---KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp ---HHHHHHHHHHHHHHHC-
T ss_pred ---HHHHHHHHHHHHHhhhh
Confidence 35888999999999864
No 272
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.55 E-value=1.5e-12 Score=149.26 Aligned_cols=291 Identities=11% Similarity=0.042 Sum_probs=178.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc------ceeccCCCCccccccccceEEecCCcEEEEEe
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------AKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~------~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (752)
.+...+|+|++..++.+. +....|.++++..+. .+.++.+.. .+..+.|||||+.|+..+
T Consensus 384 ~V~~v~~~~~~~~~l~s~---------s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSA---------SRDKSIILWKLTKDDKAYGVAQRRLTGHSH-----FVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CEEEEECCTTCCSEEEEE---------ETTSEEEEEECCCSTTCSCEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred eeEEEEecCCCCCEEEEE---------eCCCcEEEEEccCCCcccccccceecCCCC-----cEEEEEECCCCCEEEEEe
Confidence 488899999876554443 333678888876543 133433332 467889999999888764
Q ss_pred cCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceecccc
Q 004456 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEP 182 (752)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~~ 182 (752)
.+ +.|.++|+ +| ..+.+..+ ..+..++|
T Consensus 450 ~D-------------------------------------------------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 WD-------------------------------------------------GELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp TT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CC-------------------------------------------------CcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 21 68999999 66 44555555 78899999
Q ss_pred CCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEe
Q 004456 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 183 SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~ 262 (752)
||||++|+..+.+. .|.+||..+.....+..... .+...+..+.|+|++...++++..
T Consensus 481 s~~~~~l~s~s~D~-------------~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 481 SLDNRQIVSASRDR-------------TIKLWNTLGECKYTISEGGE---------GHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CTTSSCEEEEETTS-------------CEEEECTTSCEEEEECSSTT---------SCSSCEEEEEECSCSSSCEEEEEE
T ss_pred eCCCCEEEEEeCCC-------------EEEEEECCCCcceeeccCCC---------CCCCcEEEEEEeCCCCcceEEEEe
Confidence 99999998876663 79999987765544433211 112236678999998532333332
Q ss_pred ccCCCCccccCccceEEeccCCCCCCCC-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceec
Q 004456 263 QDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (752)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 341 (752)
..+.|.+||+ .... ...+......+..++|||||+.|+..+ ....|.++|+.++ . .+
T Consensus 539 -----------~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~----~Dg~i~iwd~~~~--~--~~ 596 (694)
T 3dm0_A 539 -----------WDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG----KDGVVLLWDLAEG--K--KL 596 (694)
T ss_dssp -----------TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSBCEEEETTTT--E--EE
T ss_pred -----------CCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe----CCCeEEEEECCCC--c--eE
Confidence 3347888888 3333 334555667789999999999888876 2335778888764 2 22
Q ss_pred cccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhc
Q 004456 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (752)
Q Consensus 342 ~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (752)
....... ....++|||++..|+..... .|.+||+.+++...............
T Consensus 597 ~~~~~~~-----~v~~~~~sp~~~~l~~~~~~----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~ 649 (694)
T 3dm0_A 597 YSLEANS-----VIHALCFSPNRYWLCAATEH----------------------GIKIWDLESKSIVEDLKVDLKAEAEK 649 (694)
T ss_dssp ECCBCSS-----CEEEEEECSSSSEEEEEETT----------------------EEEEEETTTTEEEEEECCCCC-----
T ss_pred EEecCCC-----cEEEEEEcCCCcEEEEEcCC----------------------CEEEEECCCCCChhhhcccccccccc
Confidence 1111111 11236799999877665411 38899998887644322111000000
Q ss_pred -----eeeeec---CCcceecccCCCEEEEEEecCCCCcEEEEEECC
Q 004456 422 -----AVALVF---GQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (752)
Q Consensus 422 -----~~~~~~---~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~ 460 (752)
...... ....++|||||+.|+.... ...|++|++.
T Consensus 650 ~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~----Dg~i~iW~i~ 692 (694)
T 3dm0_A 650 ADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT----DGVIRVWGIG 692 (694)
T ss_dssp -----------CCCCEEEEEECTTSSEEEEEET----TSEEEEEEC-
T ss_pred ccccccccCCceeEEeeeEEEcCCCCEEEEEcC----CCeEEEEecc
Confidence 000000 0123689999998875432 3357888753
No 273
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.55 E-value=3.2e-13 Score=137.06 Aligned_cols=206 Identities=14% Similarity=0.020 Sum_probs=126.6
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+++...- ..|.||++||.+... ..| ......|+++ |.|++ .|.+|+
T Consensus 16 ~~g~~l~y~~~G----------~g~~lvllHG~~~~~-----------~~w----~~~~~~L~~~-~~via---~Dl~G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG----------AGPTLLLLHGWPGFW-----------WEW----SKVIGPLAEH-YDVIV---PDLRGF 66 (294)
T ss_dssp CSSCEEEEEEEE----------CSSEEEEECCSSCCG-----------GGG----HHHHHHHHTT-SEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC----------CCCEEEEECCCCcch-----------hhH----HHHHHHHhhc-CEEEe---cCCCCC
Confidence 467777765542 137899999964210 111 2344556555 99999 667788
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC-CCCC
Q 004456 570 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-KTLT 642 (752)
Q Consensus 570 g~~~~~~------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~-~~~~ 642 (752)
|.+..+. .......+|+.+.++.+ + .+++.|+||||||.+|+.+|.++|++++++|++++... ....
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL---G---IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT---T---CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc---C---CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 8775542 23455566666666554 2 35899999999999999999999999999999986321 1000
Q ss_pred c---------c----C---cc----cccc------------------chh--hhHHHHHhc-------------------
Q 004456 643 P---------F----G---FQ----TEFR------------------TLW--EATNVYIEM------------------- 663 (752)
Q Consensus 643 ~---------~----~---~~----~~~~------------------~~~--~~~~~~~~~------------------- 663 (752)
. + . .. .... ..+ +....+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR 220 (294)
T ss_dssp --------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS
T ss_pred hccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh
Confidence 0 0 0 00 0000 000 000001000
Q ss_pred Chhh-----hcCCCCCCEEEEEeCCCCCCCCCH-HHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHH
Q 004456 664 SPIT-----HANKIKKPILIIHGEVDDKVGLFP-MQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 664 ~~~~-----~~~~~~~P~li~~G~~D~~v~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 737 (752)
.... .+.++++|+|+++|++|..+| . ...+.+.+. -...++++++++||... .+.++.+.+.+.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKY----YSNYTMETIEDCGHFLM-VEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHH----BSSEEEEEETTCCSCHH-HHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHH----cCCCceEEeCCCCCChh-hhCHHHHHHHHHHHh
Confidence 0000 122688999999999999876 4 333333332 24579999999999765 566788888888886
No 274
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.55 E-value=1.4e-12 Score=135.24 Aligned_cols=271 Identities=7% Similarity=0.028 Sum_probs=165.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc----ceeccCCCCccccccccceEEecCCc-EEEEEec
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIP 106 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspdg~-~l~~~~~ 106 (752)
.+...+|||||++|+..+ ....|+++++++++ .+.+..+.. .+..+.|+||++ .|+..+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~----------~d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITS----------WDGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEE----------TTSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEc----------CCCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcC
Confidence 588899999999998863 34678888888877 444433322 467889999999 8887632
Q ss_pred CCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCC--c-cceeccc
Q 004456 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGT--P-AVYTAVE 181 (752)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~--~-~~~~~~~ 181 (752)
.+.|+++++ .+ +...+.. + ..+..+.
T Consensus 78 -------------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 78 -------------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp -------------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred -------------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 157888898 65 6666665 5 7888999
Q ss_pred cCCCCceEEEEecccCccccccccCccccEEEEecCC---------ceeEEecCCCCCCCCCcccCCccccccceeeeeC
Q 004456 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG---------KLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspD 252 (752)
|+| ++.|+..+.+. .+.+||+.+ .+...... ....+..+.|+|+
T Consensus 109 ~~~-~~~l~s~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWDG-------------LIEVIDPRNYGDGVIAVKNLNSNNTK-------------VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETTS-------------EEEEECHHHHTTBCEEEEESCSSSSS-------------SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCCC-------------eEEEEcccccccccccccCCeeeEEe-------------eCCceEEEEecCC
Confidence 999 88888776553 789999864 32111111 1123678999988
Q ss_pred CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeE-Eeecccceeeeeeec-CCceEEEeeecccCceeEEEE
Q 004456 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEI-LHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLV 329 (752)
Q Consensus 253 G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~ 329 (752)
+ ++... ..+.|.++++.. .+.. ... .......+..++|+| |++.++.+.. ...+.++
T Consensus 162 ~---l~~~~------------~d~~i~i~d~~~-~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~----dg~i~i~ 221 (342)
T 1yfq_A 162 R---LIVGM------------NNSQVQWFRLPL-CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI----DGRVAVE 221 (342)
T ss_dssp E---EEEEE------------STTEEEEEESSC-CTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET----TSEEEEE
T ss_pred c---EEEEe------------CCCeEEEEECCc-cccccceeeecCCCCceeEEEECCCCCCEEEEEec----CCcEEEE
Confidence 7 33332 344788898831 0112 222 233455688899999 9998888762 2234454
Q ss_pred cCCCC--C--ccce-eccccccccc--cCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEec
Q 004456 330 CPGSK--D--VAPR-VLFDRVFENV--YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 402 (752)
Q Consensus 330 ~~~~~--~--~~~~-~l~~~~~~~~--~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 402 (752)
+++.. . .... .+........ ........++|+|+|++|+....+ | .|++||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-------------g--------~i~vwd~ 280 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD-------------G--------IISCWNL 280 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-------------S--------CEEEEET
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-------------c--------eEEEEcC
Confidence 44332 0 0111 1211110000 000011136799999998877622 1 4899999
Q ss_pred CCCceeEEeecc-chhhhhceeeeecCCcceecccCCCEEEEEEec
Q 004456 403 NTGSKERIWESN-REKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (752)
Q Consensus 403 ~~g~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~ 447 (752)
.+++........ .. .+..+ + +|++.|+....+
T Consensus 281 ~~~~~~~~~~~~h~~----~v~~~-------~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 281 QTRKKIKNFAKFNED----SVVKI-------A--CSDNILCLATSD 313 (342)
T ss_dssp TTTEEEEECCCCSSS----EEEEE-------E--ECSSEEEEEEEC
T ss_pred ccHhHhhhhhcccCC----CceEe-------c--CCCCeEEEEecC
Confidence 888764443322 11 12222 2 788877766543
No 275
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.55 E-value=7.6e-14 Score=142.33 Aligned_cols=197 Identities=14% Similarity=0.061 Sum_probs=123.9
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC--CcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 589 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~ 589 (752)
..|.||++||.+.. ... +..+...|+++ ||.|++ .+.+|+|.+.... ...++++.+.
T Consensus 35 ~~~~vvllHG~~~~-----------~~~----~~~~~~~L~~~~~g~~vi~---~D~~G~G~s~~~~---~~~~~~~~~~ 93 (302)
T 1pja_A 35 SYKPVIVVHGLFDS-----------SYS----FRHLLEYINETHPGTVVTV---LDLFDGRESLRPL---WEQVQGFREA 93 (302)
T ss_dssp CCCCEEEECCTTCC-----------GGG----GHHHHHHHHHHSTTCCEEE---CCSSCSGGGGSCH---HHHHHHHHHH
T ss_pred CCCeEEEECCCCCC-----------hhH----HHHHHHHHHhcCCCcEEEE---eccCCCccchhhH---HHHHHHHHHH
Confidence 36889999996321 111 22456678888 999999 5666777664332 2345555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCCccCc-----cc---------------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLTPFGF-----QT--------------- 648 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-~~~~~v~~~~~~~~~~~~~~~-----~~--------------- 648 (752)
+..+.+.. .+++.++||||||.+++.++.++|+ +++++|++++........... ..
T Consensus 94 l~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (302)
T 1pja_A 94 VVPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWG 170 (302)
T ss_dssp HHHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTG
T ss_pred HHHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHH
Confidence 55555443 3689999999999999999999999 799999998764321110000 00
Q ss_pred ---cccchhh---hHHHHHhcC-----------------hhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHH-----
Q 004456 649 ---EFRTLWE---ATNVYIEMS-----------------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA----- 700 (752)
Q Consensus 649 ---~~~~~~~---~~~~~~~~~-----------------~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~----- 700 (752)
.....|. ....+.... ....+.+++ |+|+++|++|.++| +..++.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~ 247 (302)
T 1pja_A 171 QEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANET 247 (302)
T ss_dssp GGSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCC
T ss_pred HHhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCccc
Confidence 0000000 001110000 123456788 99999999999998 7666555221
Q ss_pred -------------------HHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHH
Q 004456 701 -------------------LKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 737 (752)
Q Consensus 701 -------------------l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 737 (752)
+... .++++++++++||... .+.++.+.+.+.+||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 248 VLEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp EECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred ccchhhhhhhhhhhhchhhHhhc-CCeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 1111 2389999999999865 456777777777775
No 276
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.54 E-value=3.6e-12 Score=156.53 Aligned_cols=257 Identities=13% Similarity=0.082 Sum_probs=159.0
Q ss_pred ceeEEeecCCCCCCCCce-eecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 5 TGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
..|.++++.. ++.. .+.. ....+...+|||||++||..+ ....|.++++.+++..........
T Consensus 637 ~~i~vw~~~~----~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~~~ 700 (1249)
T 3sfz_A 637 KTLQVFKAET----GEKLLDIKA--HEDEVLCCAFSSDDSYIATCS----------ADKKVKIWDSATGKLVHTYDEHSE 700 (1249)
T ss_dssp SCEEEEETTT----CCEEEEECC--CSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTCCEEEEEECCSS
T ss_pred CeEEEEECCC----CCEEEEecc--CCCCEEEEEEecCCCEEEEEe----------CCCeEEEEECCCCceEEEEcCCCC
Confidence 4577788766 5433 3332 233588999999999999863 346799999998875443322221
Q ss_pred cccccccceEEecCCcE--EEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 84 CLNAVFGSFVWVNNSTL--LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.+..+.|+|+++. ++..+. .+.|.+
T Consensus 701 ----~v~~~~~~~~~~~~~l~sg~~-------------------------------------------------d~~v~v 727 (1249)
T 3sfz_A 701 ----QVNCCHFTNKSNHLLLATGSN-------------------------------------------------DFFLKL 727 (1249)
T ss_dssp ----CEEEEEECSSSSCCEEEEEET-------------------------------------------------TSCEEE
T ss_pred ----cEEEEEEecCCCceEEEEEeC-------------------------------------------------CCeEEE
Confidence 4678899997553 333211 157888
Q ss_pred Ecc-CCC-ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCC-CCCCCCCccc
Q 004456 162 GSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL-PPAEDIPVCY 237 (752)
Q Consensus 162 ~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-~~~~~~~~~~ 237 (752)
|++ +|+ ...+..+ ..+..++|+|||+.|+..+.++ .+.+||+.++........ ..........
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg-------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG-------------TLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS-------------EEEEEEGGGTEEEEEEECCCCC-------
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC-------------eEEEEeCCCCcccceecccccccccCCcc
Confidence 998 664 3444444 7889999999999998876653 799999986654332211 1100000001
Q ss_pred CCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEe-ecccceeeeeeecCCceEEE
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH-KLDLRFRSVSWCDDSLALVN 315 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~-~~~~~~~~~~~spDg~~l~~ 315 (752)
......+..++|+|||+. ++... .+.+++++. .++.. ..+. .....+..++|+|+++.++.
T Consensus 795 ~~~~~~v~~~~~s~dg~~-l~~~~-------------~~~v~~~d~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDK-IIVAA-------------KNKVLLFDI---HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSE-EEEEE-------------TTEEEEEET---TTCCEEEEEECSSSSCCCEEEECSSTTEEEE
T ss_pred ccccceEEEEEECCCCCE-EEEEc-------------CCcEEEEEe---cCCCceeEEcCCCCCceEEEEEcCCCCEEEE
Confidence 111223667899999997 55553 236888887 33332 2332 34566788999999999888
Q ss_pred eeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
+. ..+.|.++++.++ ........... ....++|+|||++|+..+.
T Consensus 858 ~~----~dg~v~vwd~~~~--~~~~~~~~h~~------~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 858 AL----SQYCVELWNIDSR--LKVADCRGHLS------WVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp EC----SSSCEEEEETTTT--EEEEEECCCSS------CEEEEEECTTSSEEEEEET
T ss_pred Ee----CCCeEEEEEcCCC--ceeeecCCCcc------ceEEEEECCCCCEEEEEeC
Confidence 76 3335778888764 22222211111 1112679999998887763
No 277
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.54 E-value=6.5e-13 Score=139.37 Aligned_cols=277 Identities=9% Similarity=-0.037 Sum_probs=144.2
Q ss_pred ceeEEeecCCCCCCCCceeecCC--CCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcc-cCcceeccCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGY--PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE-TGEAKPLFESP 81 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~-~g~~~~lt~~~ 81 (752)
.+|+++.++. .+|+.+.+... .........+|||||++|+.+.. . .|.+++++ +|+..++....
T Consensus 14 ~~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---------~--~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 14 GAIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---------K--KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---------T--EEEEEEEEETTEEEEEEEEE
T ss_pred CcEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---------c--eEEEEEECCCCCEEEeeEee
Confidence 4688877643 34776666432 22235778999999998865431 1 68888876 67655443221
Q ss_pred CccccccccceEEecCCcEE-EEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 82 DICLNAVFGSFVWVNNSTLL-IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
... ....+.|+|||+.| +++... +.. . .+ .. . . +...+.+.
T Consensus 81 ~~g---~~~~~~~spdg~~l~~~~~~~--~~~-----------~------------~~------~~-~-~--~~~~g~v~ 122 (365)
T 1jof_A 81 IGG---HPRANDADTNTRAIFLLAAKQ--PPY-----------A------------VY------AN-P-F--YKFAGYGN 122 (365)
T ss_dssp CCS---SGGGGCTTSCCEEEEEEECSS--TTC-----------C------------EE------EE-E-E--SSSCCEEE
T ss_pred cCC---CCccEEECCCCCEEEEEEecC--Ccc-----------e------------ec------cc-e-e--ecCCceEE
Confidence 100 13467999999974 444220 000 0 00 00 0 0 00013444
Q ss_pred EEcc--CCCcc-ccC-----CccceeccccCCCCceEEEEecccCccccccccCccccEEEEecC-CceeEEecCCCCCC
Q 004456 161 LGSL--DGTAK-DFG-----TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAE 231 (752)
Q Consensus 161 ~~~~--~G~~~-~l~-----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~ 231 (752)
++++ +|+.. .+. .......++|||||++|++..... ..|++|+++ +++.+.+......
T Consensus 123 v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~------------~~v~~~~~~~~g~~~~~~~~~~~- 189 (365)
T 1jof_A 123 VFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA------------NKLWTHRKLASGEVELVGSVDAP- 189 (365)
T ss_dssp EEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTSCEEEEEEEECS-
T ss_pred EEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC------------CEEEEEEECCCCCEEEeeeEecC-
Confidence 5554 56432 222 125677899999999987764332 378999987 5654433211100
Q ss_pred CCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCe----EEeecc------c--
Q 004456 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILHKLD------L-- 299 (752)
Q Consensus 232 ~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~l~~~~------~-- 299 (752)
....+++.++|||||+. ||+.... .+.+.+++.+. +++... .+.... .
T Consensus 190 -------~~g~~p~~~~~spdg~~-l~v~~~~-----------~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 190 -------DPGDHPRWVAMHPTGNY-LYALMEA-----------GNRICEYVIDP-ATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp -------STTCCEEEEEECTTSSE-EEEEETT-----------TTEEEEEEECT-TTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred -------CCCCCCCEeEECCCCCE-EEEEECC-----------CCeEEEEEEeC-CCCcEEEccceEEcCCCCcCCcccc
Confidence 00123678999999997 6666421 22444443311 223321 122110 1
Q ss_pred -----ceeeee-eecCCceEEEeeecccC---ceeEEEEcCCCCCccceeccc-cccccccCCCCCCceeeCC---CCCe
Q 004456 300 -----RFRSVS-WCDDSLALVNETWYKTS---QTRTWLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTS---TGTN 366 (752)
Q Consensus 300 -----~~~~~~-~spDg~~l~~~~~~~~~---~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~p~~~~s~---dg~~ 366 (752)
....++ |||||+.|+.+. .... ...|.+++++.. ++...+.. ..... . ..-.++||| ||++
T Consensus 250 ~~~~~~~~~i~~~spdG~~l~v~~-~~~~~~~~~~i~v~~~~~~-g~~~~~~~~~~~~~--~--~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 250 TGKGLYRADVCALTFSGKYMFASS-RANKFELQGYIAGFKLRDC-GSIEKQLFLSPTPT--S--GGHSNAVSPCPWSDEW 323 (365)
T ss_dssp TSSBSEEEEEEEECTTSSEEEEEE-EESSTTSCCEEEEEEECTT-SCEEEEEEEEECSS--C--CTTCCCEEECTTCTTE
T ss_pred cccccccccEEEECCCCCEEEEEC-CCCCCCCCCeEEEEEECCC-CCEEEeeeeeecCC--C--CcccceecCCCcCCCE
Confidence 366789 999999886544 2222 114555554321 23222111 10000 0 111256899 8999
Q ss_pred EEEee
Q 004456 367 VIAKI 371 (752)
Q Consensus 367 l~~~~ 371 (752)
|++..
T Consensus 324 l~v~~ 328 (365)
T 1jof_A 324 MAITD 328 (365)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98876
No 278
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5e-13 Score=143.19 Aligned_cols=239 Identities=12% Similarity=0.020 Sum_probs=145.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||... ....|.+++.++.....+..+.. .+..+.|+||++.|+..+.+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~-- 172 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGV----------ENGELRLWNKTGALLNVLNFHRA-----PIVSVKWNKDGTHIISMDVENV-- 172 (425)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSCEEEEETTSCEEEEECCCCS-----CEEEEEECTTSSEEEEEETTCC--
T ss_pred ceEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCeeeeccCCCc-----cEEEEEECCCCCEEEEEecCCe--
Confidence 588999999999999864 23578888866555666643332 4678899999999887754221
Q ss_pred CCCCccCCCCCceecccccccc----------cccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-ccee
Q 004456 112 PPKKTMVPLGPKIQSNEQKNII----------ISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYT 178 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~ 178 (752)
...+....+............ ........+.+.+++..+.....+.|+++++ +++ ...+..+ ..+.
T Consensus 173 -i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 173 -TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp -EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred -EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 111111111111111000000 0000011222333443333335578999999 553 3344444 7788
Q ss_pred ccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEE
Q 004456 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (752)
Q Consensus 179 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~ 258 (752)
.++|+|||+.|+....+. .+.+|++..++....... ....+..+.|+||| . ++
T Consensus 252 ~~~~~~~~~~l~~~~~d~-------------~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~~~~~-~-l~ 304 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDG-------------TLRIWHGGNGNSQNCFYG------------HSQSIVSASWVGDD-K-VI 304 (425)
T ss_dssp EEEEETTTTEEEEEETTS-------------CEEEECSSSBSCSEEECC------------CSSCEEEEEEETTT-E-EE
T ss_pred EEEECCCCCEEEEEcCCC-------------EEEEEECCCCccceEecC------------CCccEEEEEECCCC-E-EE
Confidence 999999999988876553 799999887643332211 11236789999999 4 55
Q ss_pred EEEeccCCCCccccCccceEEeccCCCCCCCCCe-EEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
... ..+.+.++++ ..+... .+......+..++|+||++.|+... ..+.|.++++.+.
T Consensus 305 ~~~------------~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 305 SCS------------MDGSVRLWSL---KQNTLLALSIVDGVPIFAGRISQDGQKYAVAF----MDGQVNVYDLKKL 362 (425)
T ss_dssp EEE------------TTSEEEEEET---TTTEEEEEEECTTCCEEEEEECTTSSEEEEEE----TTSCEEEEECHHH
T ss_pred EEe------------CCCcEEEEEC---CCCcEeEecccCCccEEEEEEcCCCCEEEEEE----CCCeEEEEECCCC
Confidence 554 3457899988 333333 3344466788999999999888876 2335777777653
No 279
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.54 E-value=1.2e-12 Score=153.34 Aligned_cols=242 Identities=12% Similarity=0.088 Sum_probs=156.1
Q ss_pred ceeEEeecCCCCCCCCc-eeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~ 82 (752)
..|.++++.. |+. +.+... ...+..+.|||||++||... ....|.++++.+++... +..+..
T Consensus 35 g~v~iwd~~~----~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~~ 98 (814)
T 3mkq_A 35 GRVEIWNYET----QVEVRSIQVT--ETPVRAGKFIARKNWIIVGS----------DDFRIRVFNYNTGEKVVDFEAHPD 98 (814)
T ss_dssp SEEEEEETTT----TEEEEEEECC--SSCEEEEEEEGGGTEEEEEE----------TTSEEEEEETTTCCEEEEEECCSS
T ss_pred CEEEEEECCC----CceEEEEecC--CCcEEEEEEeCCCCEEEEEe----------CCCeEEEEECCCCcEEEEEecCCC
Confidence 4577888765 533 344422 23589999999999999963 34789999998877544 432322
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
.+..+.|+|||+.|+..+.+ +.|.++
T Consensus 99 -----~v~~~~~s~~~~~l~~~~~d-------------------------------------------------g~i~vw 124 (814)
T 3mkq_A 99 -----YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLW 124 (814)
T ss_dssp -----CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEE
T ss_pred -----CEEEEEEeCCCCEEEEEcCC-------------------------------------------------CEEEEE
Confidence 46788999999998876321 578888
Q ss_pred cc-CC-Cc-cccCCc-cceeccccCC-CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCccc
Q 004456 163 SL-DG-TA-KDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (752)
Q Consensus 163 ~~-~G-~~-~~l~~~-~~~~~~~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (752)
++ ++ .. ..+..+ ..+..++|+| ||+.|+....++ .+.+|++.++..........
T Consensus 125 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-------------~v~vwd~~~~~~~~~~~~~~-------- 183 (814)
T 3mkq_A 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR-------------TVKVWSLGQSTPNFTLTTGQ-------- 183 (814)
T ss_dssp EGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-------------EEEEEETTCSSCSEEEECCC--------
T ss_pred ECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC-------------eEEEEECCCCcceeEEecCC--------
Confidence 88 44 32 333334 7788999999 888888876553 79999987654322211111
Q ss_pred CCccccccceeeee--CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEE
Q 004456 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (752)
Q Consensus 238 ~~~~~~~~~~~wsp--DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~ 315 (752)
...+..+.|+| ||+. |+... ..+.+.+++.. .+.....+......+..++|+|+|+.|+.
T Consensus 184 ---~~~v~~~~~~~~~~~~~-l~~~~------------~dg~i~~~d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 184 ---ERGVNYVDYYPLPDKPY-MITAS------------DDLTIKIWDYQ--TKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp ---TTCCCEEEECCSTTCCE-EEEEC------------TTSEEEEEETT--TTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred ---CCCEEEEEEEECCCCCE-EEEEe------------CCCEEEEEECC--CCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 12256789999 8885 54442 34478888873 22223334445667889999999998888
Q ss_pred eeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeE
Q 004456 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 367 (752)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l 367 (752)
.. ..+.|.++++.++ ........... ..-.++|+|+|+.+
T Consensus 246 ~~----~dg~v~vwd~~~~--~~~~~~~~~~~------~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 246 GS----EDGTLKIWNSSTY--KVEKTLNVGLE------RSWCIATHPTGRKN 285 (814)
T ss_dssp EE----TTSCEEEEETTTC--SEEEEECCSSS------SEEEEEECTTCGGG
T ss_pred Ee----CCCeEEEEECCCC--cEEEEeecCCC------cEEEEEEccCCCce
Confidence 76 2335888888774 22222211111 11126789999864
No 280
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.54 E-value=1.2e-12 Score=134.62 Aligned_cols=229 Identities=10% Similarity=0.060 Sum_probs=142.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.+....|||||++|+..+ ....|.++++.+++..+ +..+.. .+..+.|+|+++.|+..+.+
T Consensus 67 ~v~~~~~s~dg~~l~s~s----------~D~~v~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D--- 128 (319)
T 3frx_A 67 IVQDCTLTADGAYALSAS----------WDKTLRLWDVATGETYQRFVGHKS-----DVMSVDIDKKASMIISGSRD--- 128 (319)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSCEEEEEETT---
T ss_pred cEEEEEECCCCCEEEEEe----------CCCEEEEEECCCCCeeEEEccCCC-----cEEEEEEcCCCCEEEEEeCC---
Confidence 578899999999998863 34789999998887544 322222 46788999999988876431
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCc-cceeccccCCCCc-
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQK- 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk- 187 (752)
+.|.++++.+ ....+..+ ..+..+.|+|+++
T Consensus 129 ----------------------------------------------~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 129 ----------------------------------------------KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp ----------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECCC---
T ss_pred ----------------------------------------------CeEEEEECCCCeEEEEeccCCcEEEEEEccCCCC
Confidence 5678888866 44444444 6778888988543
Q ss_pred -----eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEe
Q 004456 188 -----YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (752)
Q Consensus 188 -----~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~ 262 (752)
.|+..+.+ ..+.+||+...+....... ....+..++|+|||+. |+..+
T Consensus 163 ~~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~------------h~~~v~~~~~sp~g~~-l~s~~- 215 (319)
T 3frx_A 163 DDDSVTIISAGND-------------KMVKAWNLNQFQIEADFIG------------HNSNINTLTASPDGTL-IASAG- 215 (319)
T ss_dssp ---CCEEEEEETT-------------SCEEEEETTTTEEEEEECC------------CCSCEEEEEECTTSSE-EEEEE-
T ss_pred CCCccEEEEEeCC-------------CEEEEEECCcchhheeecC------------CCCcEEEEEEcCCCCE-EEEEe-
Confidence 56555444 3799999987654432211 1123678999999996 55543
Q ss_pred ccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecc
Q 004456 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (752)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 342 (752)
..+.|.+||+ ..+...........+..++|+||++.|+.... . .+.+++++.. .....+.
T Consensus 216 -----------~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~----~i~v~~~~~~-~~~~~~~ 275 (319)
T 3frx_A 216 -----------KDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-T----GIKVFSLDPQ-YLVDDLR 275 (319)
T ss_dssp -----------TTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEET-T----EEEEEEETTE-EEEEEEC
T ss_pred -----------CCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-C----CcEEEEeCcC-eeeeccC
Confidence 3457899998 33333333344567889999999998887652 1 2444444432 0111111
Q ss_pred ccccccc-cCCCCCCceeeCCCCCeEEEee
Q 004456 343 DRVFENV-YSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 343 ~~~~~~~-~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
....... ........++|||||++|+..+
T Consensus 276 ~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 276 PEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp CCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred ccccccccCcCcceeEEEECCCCCEEEEee
Confidence 0000000 0000112367999999998876
No 281
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.54 E-value=1.8e-13 Score=136.99 Aligned_cols=246 Identities=15% Similarity=0.155 Sum_probs=145.5
Q ss_pred CceEEEEEEcC-CCcEEEEEEEeCCCCCCC---CCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCC
Q 004456 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555 (752)
Q Consensus 480 ~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~---~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 555 (752)
.....+++.+. -+..+...+|+|+++... ..+++|+|+++||.+ ++...|.... .....+.+.+
T Consensus 12 G~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~-----------~~~~~w~~~~-~~~~~~~~~~ 79 (299)
T 4fol_A 12 GRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT-----------CTPDNASEKA-FWQFQADKYG 79 (299)
T ss_dssp EEEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTT-----------CCHHHHHHHS-CHHHHHHHHT
T ss_pred CEEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCC-----------CChHHHHHhc-hHhHHHHHcC
Confidence 35566677654 466899999999987532 234699999999953 2212221111 1233455678
Q ss_pred cEEEecCCCCC-------------CCCCCCCC----------CchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEE
Q 004456 556 FAVLAGPSIPI-------------IGEGDKLP----------NDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGG 608 (752)
Q Consensus 556 ~~v~~~~~~~~-------------~g~g~~~~----------~~~~~~~~~~d~~~~~~~l~~----~~~~d~~~i~l~G 608 (752)
.+++.++..+. .|.+..+. ...+..-+.+++...|+.--. +...+.++.+|.|
T Consensus 80 ~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G 159 (299)
T 4fol_A 80 FAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITG 159 (299)
T ss_dssp CEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEE
T ss_pred chhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEe
Confidence 88887332110 01111110 112233445555554432211 1123457899999
Q ss_pred eChHHHHHHHHHHhC--CCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCC---C-CCCEEEEEeC
Q 004456 609 HSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK---I-KKPILIIHGE 682 (752)
Q Consensus 609 ~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~P~li~~G~ 682 (752)
|||||+-|+.++.++ |..++++.+.+|..+....+++..............+...++...+.+ . ..++++.+|+
T Consensus 160 ~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~ 239 (299)
T 4fol_A 160 ISMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGD 239 (299)
T ss_dssp BTHHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEET
T ss_pred cCchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecC
Confidence 999999999999985 678899999998876443333221111111122233344444443332 2 3679999999
Q ss_pred CCCCCCCCHH-HHHHHHHHHHhCCCc--EEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhc
Q 004456 683 VDDKVGLFPM-QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 742 (752)
Q Consensus 683 ~D~~v~~~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 742 (752)
.|.+.+ .. ..+.+.+++++.+.+ +++...||.+|.+.. +..+++.-++|..++|+
T Consensus 240 ~D~f~~--~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 240 SDPFLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp TCTTHH--HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred CCcchh--hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 998743 11 236788888888765 789999998998542 45677888999999986
No 282
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.53 E-value=1.1e-13 Score=139.79 Aligned_cols=213 Identities=13% Similarity=0.072 Sum_probs=128.2
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCc-cCCCCc-hhHHHHHhCCcEEEecCCCCCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTP-TSSLIFLARRFAVLAGPSIPIIG 568 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~G~~v~~~~~~~~~g 568 (752)
+|.++....+-++. ...|+||++||.+... .. |...+. ..+..|+ ++|.|++ .+.+|
T Consensus 19 ~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~-----------~~~~~~~~~~~~~~~L~-~~~~vi~---~D~~G 77 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK------PKRPAIFTYHDVGLNY-----------KSCFQPLFRFGDMQEII-QNFVRVH---VDAPG 77 (286)
T ss_dssp TTEEEEEEEESCCC------TTCCEEEEECCTTCCH-----------HHHHHHHHTSHHHHHHH-TTSCEEE---EECTT
T ss_pred CCeEEEEEeccCCC------CCCCeEEEeCCCCCCc-----------hhhhhhhhhhchhHHHh-cCCCEEE---ecCCC
Confidence 56677777664331 1258999999964211 00 110000 0344454 4699999 44556
Q ss_pred CCCCC--CCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004456 569 EGDKL--PNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 642 (752)
Q Consensus 569 ~g~~~--~~~~----~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~ 642 (752)
+|.+. .... ......+|+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++.......
T Consensus 78 ~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 151 (286)
T 2qmq_A 78 MEEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW 151 (286)
T ss_dssp TSTTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCH
T ss_pred CCCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccch
Confidence 65432 1211 4566677777777665 2358999999999999999999999999999999986432110
Q ss_pred cc-----------C---------ccccc----cchhhhH-------------HHHH----hcCh----hhhcCCCCCCEE
Q 004456 643 PF-----------G---------FQTEF----RTLWEAT-------------NVYI----EMSP----ITHANKIKKPIL 677 (752)
Q Consensus 643 ~~-----------~---------~~~~~----~~~~~~~-------------~~~~----~~~~----~~~~~~~~~P~l 677 (752)
.. . +.... ....... ..+. .... ...+.++++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 231 (286)
T 2qmq_A 152 MDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVM 231 (286)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEE
T ss_pred hhhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEE
Confidence 00 0 00000 0000000 0000 0000 123457889999
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHhCCC-cEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 678 IIHGEVDDKVGLFPMQAERFFDALKGHGA-LSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 678 i~~G~~D~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
+++|++|..+| . ..+.+.+... .+++++++++||... .+.++.+.+.+.+||+
T Consensus 232 ii~G~~D~~~~--~-----~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 232 LVVGDQAPHED--A-----VVECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEEETTSTTHH--H-----HHHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred EEecCCCcccc--H-----HHHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 99999998864 2 2333444433 689999999999865 4557788888999884
No 283
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.53 E-value=5.6e-12 Score=130.56 Aligned_cols=289 Identities=10% Similarity=0.031 Sum_probs=170.2
Q ss_pred eeceeEecCCC-CeEEEeeccccccccccCcceEEEEEcccCcc------eeccCCCCccccccccceEEecCCcEEEEE
Q 004456 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (752)
Q Consensus 32 ~~~~~~~SPDG-~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~------~~lt~~~~~~~~~~~~~~~wspdg~~l~~~ 104 (752)
.+...+||||+ ++||-.+ .+..|.|+++..++. +.+..+.. .+..+.|+|||+.|+..
T Consensus 40 ~V~~v~~sp~~~~~l~S~s----------~D~~i~vWd~~~~~~~~~~~~~~l~~h~~-----~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSAS----------RDKTIIMWKLTRDETNYGIPQRALRGHSH-----FVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEECTTCTTEEEEEE----------TTSCEEEEEECCSSSCSEEEEEEECCCSS-----CEEEEEECTTSSEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEc----------CCCeEEEEECCCCCcccceeeEEEeCCCC-----CEEEEEECCCCCEEEEE
Confidence 58999999985 6666543 235677778766542 22221121 46788999999988876
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceeccc
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVE 181 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~ 181 (752)
+.+ +.|+.++. .+ ........ .......
T Consensus 105 ~~d-------------------------------------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 105 SWD-------------------------------------------------GTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp ETT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred ccc-------------------------------------------------ccceEEeecccceeeeecCCCCceeEEE
Confidence 321 46777777 33 22222222 5667788
Q ss_pred cCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
++|+++.|+..+.+. .+.+|++.+........... ...+..+.|++++...+++..
T Consensus 136 ~~~~~~~l~s~s~d~-------------~~~~~d~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 136 FSSDNRQIVSGSRDK-------------TIKLWNTLGVCKYTVQDESH-----------SEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp ECTTSSCEEEEETTS-------------CEEEECTTSCEEEEECSSSC-----------SSCEEEEEECSCSSSCEEEEE
T ss_pred EeecCccceeecCCC-------------eEEEEEeCCCceEEEEeccc-----------cCcccceEEccCCCCcEEEEE
Confidence 999999998876553 78899987765444332211 122556889998876344433
Q ss_pred eccCCCCccccCccceEEeccCCCCCCCC-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCcccee
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (752)
. ....+.++++ .... ...+......+..++|+|||+.|+.+. ....|.++++.+. ....
T Consensus 192 ~-----------~d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----~Dg~i~iwd~~~~--~~~~ 251 (340)
T 4aow_A 192 G-----------WDKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG----KDGQAMLWDLNEG--KHLY 251 (340)
T ss_dssp E-----------TTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE----TTCEEEEEETTTT--EEEE
T ss_pred c-----------CCCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEe----CCCeEEEEEeccC--ceee
Confidence 1 2336788887 3332 233444556788999999999888876 3346888888774 2222
Q ss_pred ccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhh
Q 004456 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (752)
Q Consensus 341 l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (752)
.... .. ....++|+|++..++... + ..|.+||+.++........... ..
T Consensus 252 ~~~~--~~-----~v~~~~~~~~~~~~~~~~-d---------------------~~i~iwd~~~~~~~~~~~~~~~--~~ 300 (340)
T 4aow_A 252 TLDG--GD-----IINALCFSPNRYWLCAAT-G---------------------PSIKIWDLEGKIIVDELKQEVI--ST 300 (340)
T ss_dssp EEEC--SS-----CEEEEEECSSSSEEEEEE-T---------------------TEEEEEETTTTEEEEEECCC------
T ss_pred eecC--Cc-----eEEeeecCCCCceeeccC-C---------------------CEEEEEECCCCeEEEeccccce--ee
Confidence 2111 11 111256899987555443 1 1488899887655333222110 00
Q ss_pred ceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
...........++|+|||+.|+....+ ..|++||+.+|+
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCcC
Confidence 000111112236899999987654322 358899988775
No 284
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4e-13 Score=143.33 Aligned_cols=184 Identities=10% Similarity=0.122 Sum_probs=111.3
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 254 (752)
..+..++|||||+.|+..+.++ .+.+|+.++ ....+. .... .+ ...+..++|||||+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-------------~V~iwd~~~-~l~~l~-~~~~--~~------~~sv~svafSPDG~ 142 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-------------NVSVFKDNK-MLTNLD-SKGN--LS------SRTYHCFEWNPIES 142 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-------------CEEEEETTE-EEEECC-CSSC--ST------TTCEEEEEECSSSS
T ss_pred CcEEEEEECCCCCEEEEEeCCC-------------cEEEEeCCc-eeeecc-CCCc--cc------cccEEEEEEcCCCC
Confidence 6788999999999999988774 789999655 222222 1100 00 01366899999999
Q ss_pred ceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC--------eEEe----ecccceeeeeeecCCceEEEeeecccC
Q 004456 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP--------EILH----KLDLRFRSVSWCDDSLALVNETWYKTS 322 (752)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~l~----~~~~~~~~~~~spDg~~l~~~~~~~~~ 322 (752)
. |+... ..+.|.+|++ .++.. ..+. .....+..++||||| ++.++.
T Consensus 143 ~-LAsgs------------~DGtVkIWd~---~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~---- 200 (588)
T 2j04_A 143 S-IVVGN------------EDGELQFFSI---RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS---- 200 (588)
T ss_dssp C-EEEEE------------TTSEEEEEEC---CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----
T ss_pred E-EEEEc------------CCCEEEEEEC---CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC----
Confidence 8 77765 3457888888 44432 2232 112468899999999 555542
Q ss_pred ceeEEEEcCCCCCcc--ceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEE
Q 004456 323 QTRTWLVCPGSKDVA--PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (752)
Q Consensus 323 ~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 400 (752)
...+++++++++... ...+....... .-.++|+ |++|+.+.. ..|.+|
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~~~------V~svaFs--g~~LASa~~----------------------~tIkLW 250 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASRRK------ITDLKIV--DYKVVLTCP----------------------GYVHKI 250 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCSSC------CCCEEEE--TTEEEEECS----------------------SEEEEE
T ss_pred CCeEEEEECCCCccccceeeecccccCc------EEEEEEE--CCEEEEEeC----------------------CeEEEE
Confidence 335888888875211 01121111111 1126688 577776651 159999
Q ss_pred ecCCCceeEEeeccchhhhhceeeeecCCcceec--ccCCCEEEEE
Q 004456 401 DINTGSKERIWESNREKYFETAVALVFGQGEEDI--NLNQLKILTS 444 (752)
Q Consensus 401 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--s~d~~~l~~~ 444 (752)
|+.+++...+..... .....+++ |+|+..|+..
T Consensus 251 d~~~~~~~~~~~gh~-----------~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 251 DLKNYSISSLKTGSL-----------ENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp ETTTTEEEEEECSCC-----------SCCCEEEETTCSSCEEEEEC
T ss_pred ECCCCeEEEEEcCCC-----------ceEEEEEeeeCCCCCEEEEE
Confidence 998887754432221 11223477 8888666544
No 285
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.52 E-value=3.2e-12 Score=132.98 Aligned_cols=289 Identities=10% Similarity=-0.019 Sum_probs=158.8
Q ss_pred ceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 004456 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (752)
Q Consensus 34 ~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (752)
..++++++++.++.. .....|+++|+++++..+....+.. .....+.|+|||+.++++..
T Consensus 3 ~g~~~~~~~~~~v~~----------~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~------- 62 (349)
T 1jmx_B 3 TGPALKAGHEYMIVT----------NYPNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNN------- 62 (349)
T ss_dssp -CCCCCTTCEEEEEE----------ETTTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEET-------
T ss_pred ccccccCCCEEEEEe----------CCCCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeC-------
Confidence 346788888766653 3457999999998876544332220 02457799999998877632
Q ss_pred CCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCCc-------cceeccccCC
Q 004456 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP-------AVYTAVEPSP 184 (752)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~~-------~~~~~~~~Sp 184 (752)
....|+++++ +|+.. .+... .....++|||
T Consensus 63 -----------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 63 -----------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 101 (349)
T ss_dssp -----------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT
T ss_pred -----------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC
Confidence 1157899998 56433 23221 1256889999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEE---ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE---LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
||++|++......... ..+......+++||+.+++... ....+ ..+..++|+|||+ +++..
T Consensus 102 dg~~l~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------------~~~~~~~~s~dg~--l~~~~ 165 (349)
T 1jmx_B 102 DGKEVYATVNPTQRLN-DHYVVKPPRLEVFSTADGLEAKPVRTFPMP-------------RQVYLMRAADDGS--LYVAG 165 (349)
T ss_dssp TSSEEEEEEEEEEECS-SCEEECCCEEEEEEGGGGGGBCCSEEEECC-------------SSCCCEEECTTSC--EEEES
T ss_pred CCCEEEEEcccccccc-cccccCCCeEEEEECCCccccceeeeccCC-------------CcccceeECCCCc--EEEcc
Confidence 9999999874410000 0000012579999987643221 11111 1255678999998 54431
Q ss_pred eccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc-------------------------ceeeeeeecCCceEEEe
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-------------------------RFRSVSWCDDSLALVNE 316 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~-------------------------~~~~~~~spDg~~l~~~ 316 (752)
. .++++|+ .+++......... ....+++++|+......
T Consensus 166 -------------~-~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 166 -------------P-DIYKMDV---KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp -------------S-SEEEECT---TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred -------------C-cEEEEeC---CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 1 3788887 4444333222111 11223344443222111
Q ss_pred eecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCC-CCCeEEEeeeecCCcceEEEEccCCCCCCCCCC
Q 004456 317 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (752)
Q Consensus 317 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (752)
. .....++.++..++ +...+....... ....+++|| ||++|+.. .+
T Consensus 229 ~---~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~sp~dg~~l~~~--~~--------------------- 275 (349)
T 1jmx_B 229 A---DLLYGYLSVDLKTG--KTHTQEFADLTE-----LYFTGLRSPKDPNQIYGV--LN--------------------- 275 (349)
T ss_dssp C---EEEEEEEEEETTTC--CEEEEEEEECSS-----CEEEEEECSSCTTEEEEE--ES---------------------
T ss_pred c---ccceeEEEEeccCC--cEEecccccCCC-----cceeeEecCCCCCEEEEE--cC---------------------
Confidence 1 01123444666653 222221111110 111256899 99988776 21
Q ss_pred eeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 396 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 396 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
.|++||+.+++.......... ...++||+||+.|+... ....|+++|..+++..
T Consensus 276 ~v~~~d~~~~~~~~~~~~~~~------------~~~~~~s~dg~~l~~~~----~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAANLDHT------------YYCVAFDKKGDKLYLGG----TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSC------------CCEEEECSSSSCEEEES----BSSEEEEEETTTTEEE
T ss_pred eEEEEECccCeEEEEEcCCCC------------ccceEECCCCCEEEEec----CCCeEEEEecccccee
Confidence 599999999887554432211 12358999999887732 2367999999887644
No 286
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2e-13 Score=145.56 Aligned_cols=244 Identities=10% Similarity=-0.006 Sum_probs=155.9
Q ss_pred CceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 30 ~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
...+...+|||||++||..+ ..+.+.+++.++ ....+. +....-...+..++|||||+.|+..+.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s----------~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS----------NNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE----------TTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT--
T ss_pred CCcEEEEEECCCCCEEEEEe----------CCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC--
Confidence 44699999999999999874 345677777544 222232 1110001136789999999999987431
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc--------ccc----CCc-c
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--------KDF----GTP-A 175 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~--------~~l----~~~-~ 175 (752)
+.|.++++ +|.. ..+ ..+ .
T Consensus 151 -----------------------------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~ 183 (588)
T 2j04_A 151 -----------------------------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKD 183 (588)
T ss_dssp -----------------------------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC
T ss_pred -----------------------------------------------CEEEEEECCCCccccccceeeeeeecccccccc
Confidence 67888888 4432 222 222 5
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeE----EecCCCCCCCCCcccCCccccccceeeee
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR----ELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (752)
.+..++||||| |+..+.+ +.+.+|+++++... .+.... ...+..++|+
T Consensus 184 ~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~h------------~~~V~svaFs- 235 (588)
T 2j04_A 184 WVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNAS------------RRKITDLKIV- 235 (588)
T ss_dssp CEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECCC------------SSCCCCEEEE-
T ss_pred cEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeecccc------------cCcEEEEEEE-
Confidence 88999999999 5555444 37999999887632 232111 1226789999
Q ss_pred CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe-ecccceeeeee--ecCCceEEEeeecccCceeEEE
Q 004456 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSW--CDDSLALVNETWYKTSQTRTWL 328 (752)
Q Consensus 252 DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~~~--spDg~~l~~~~~~~~~~~~l~~ 328 (752)
|+. |+.++ .+.+.+|++ .++....+. .....+..++| |||++.|+.+.+. +. +||.
T Consensus 236 -g~~-LASa~-------------~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed--G~-klw~ 294 (588)
T 2j04_A 236 -DYK-VVLTC-------------PGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT--SY-KVLL 294 (588)
T ss_dssp -TTE-EEEEC-------------SSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC--EE-EEEE
T ss_pred -CCE-EEEEe-------------CCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC--CC-EEEe
Confidence 554 55552 248999998 555543443 45566888999 9999888776522 33 6888
Q ss_pred EcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCcee
Q 004456 329 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 408 (752)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 408 (752)
.+ . ++++||+..+++.. + .+++|+..++...
T Consensus 295 ~d--~------------------------~~~spd~~l~a~~d-~----------------------~v~lW~~~g~~l~ 325 (588)
T 2j04_A 295 ED--E------------------------LHVTADNIIAPYLE-K----------------------KFKKWSTIWNEFN 325 (588)
T ss_dssp SS--S------------------------EEEECCCSSHHHHH-H----------------------HHHHTTTTTTSSS
T ss_pred ec--c------------------------EEECCCceEEEEcC-C----------------------EEEEEECCCCcee
Confidence 76 1 44699998887752 1 3777877655533
Q ss_pred EEeeccchhhhhceeeeecCCcceecccCCCEEEEEE
Q 004456 409 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 445 (752)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~ 445 (752)
.+ ..+ .. ...+++||||+.++..+
T Consensus 326 ~~-~~~--------~~----I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 326 NY-ETT--------LV----IHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SS-CCE--------EE----EEEEEECTTSSEEEEEE
T ss_pred ee-ccc--------eE----EEEEEECCCCCEEEEEE
Confidence 11 111 11 12258999999887654
No 287
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.52 E-value=4.5e-12 Score=131.53 Aligned_cols=244 Identities=9% Similarity=0.076 Sum_probs=152.4
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-----eeccC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-----KPLFE 79 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-----~~lt~ 79 (752)
..|.++++.. ++....... ....+...+|||||++||... ....+.++++.+++. +.+..
T Consensus 77 g~v~iWd~~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~----------~d~~v~iw~~~~~~~~~~~~~~~~~ 141 (340)
T 1got_B 77 GKLIIWDSYT----TNKVHAIPL-RSSWVMTCAYAPSGNYVACGG----------LDNICSIYNLKTREGNVRVSRELAG 141 (340)
T ss_dssp TEEEEEETTT----CCEEEEEEC-SSSCEEEEEECTTSSEEEEEE----------TTCEEEEEETTTCSBSCEEEEEEEC
T ss_pred CcEEEEECCC----CCcceEeec-CCccEEEEEECCCCCEEEEEe----------CCCeEEEEECccCCCcceeEEEecC
Confidence 4566777655 443222111 122578889999999998863 346788888876532 22222
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEE
Q 004456 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (752)
Q Consensus 80 ~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i 159 (752)
+.. .+..+.|+|+++ |+..+. .+.|
T Consensus 142 h~~-----~v~~~~~~~~~~-l~s~s~-------------------------------------------------d~~i 166 (340)
T 1got_B 142 HTG-----YLSCCRFLDDNQ-IVTSSG-------------------------------------------------DTTC 166 (340)
T ss_dssp CSS-----CEEEEEEEETTE-EEEEET-------------------------------------------------TSCE
T ss_pred CCc-----cEEEEEECCCCc-EEEEEC-------------------------------------------------CCcE
Confidence 221 356788999987 443321 1578
Q ss_pred EEEcc-CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCc
Q 004456 160 VLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPV 235 (752)
Q Consensus 160 ~~~~~-~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~ 235 (752)
.++|+ +| ....+..+ ..+..++|+|||+.|+..+.+. .+.+||+.++.... +....
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~-------------~v~~wd~~~~~~~~~~~~h~------- 226 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA-------------SAKLWDVREGMCRQTFTGHE------- 226 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTCSEEEEECCCS-------
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCC-------------cEEEEECCCCeeEEEEcCCc-------
Confidence 88898 66 34445445 7888999999999888776553 79999998765433 32222
Q ss_pred ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec---ccceeeeeeecCCce
Q 004456 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDDSLA 312 (752)
Q Consensus 236 ~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~---~~~~~~~~~spDg~~ 312 (752)
..+..+.|+|||+. |+..+ ..+.+.+||+ ........... ...+..++|+|||+.
T Consensus 227 ------~~v~~v~~~p~~~~-l~s~s------------~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 227 ------SDINAICFFPNGNA-FATGS------------DDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp ------SCEEEEEECTTSSE-EEEEE------------TTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ------CCEEEEEEcCCCCE-EEEEc------------CCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 23678999999996 55443 3347888888 32222221111 135788999999999
Q ss_pred EEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 313 l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
|+.+. ....|.++++..+ ............ .-.++|+|||++|+..+.
T Consensus 285 l~~g~----~d~~i~vwd~~~~--~~~~~~~~h~~~------v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 285 LLAGY----DDFNCNVWDALKA--DRAGVLAGHDNR------VSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp EEEEE----TTSEEEEEETTTC--CEEEEEECCSSC------EEEEEECTTSSCEEEEET
T ss_pred EEEEC----CCCeEEEEEcccC--cEeeEeecCCCc------EEEEEEcCCCCEEEEEcC
Confidence 88876 3346888887764 222221111111 112679999999988763
No 288
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.52 E-value=1.2e-12 Score=139.01 Aligned_cols=230 Identities=12% Similarity=-0.018 Sum_probs=141.7
Q ss_pred cceeEEeecCCCCCCCC-------ceeecCCCCCceeceeEecCC----C---CeEEEeeccccccccccCcceEEEEEc
Q 004456 4 FTGIGIHRLLPDDSLGP-------EKEVHGYPDGAKINFVSWSPD----G---KRIAFSVRVDEEDNVSSCKLRVWIADA 69 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~-------~~~i~~~~~~~~~~~~~~SPD----G---~~ia~~~~~~~~~~~~~~~~~l~v~~~ 69 (752)
...|.++++.. ++ ...+... ...+....|+|| | ++|+..+ ....|+++++
T Consensus 35 dg~i~iw~~~~----~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~g~~~~~l~s~~----------~dg~i~iw~~ 98 (397)
T 1sq9_A 35 DGYLKVWDNKL----LDNENPKDKSYSHFVH--KSGLHHVDVLQAIERDAFELCLVATTS----------FSGDLLFYRI 98 (397)
T ss_dssp TSEEEEEESBC----CTTCCGGGGEEEEECC--TTCEEEEEEEEEEETTTEEEEEEEEEE----------TTSCEEEEEE
T ss_pred CCEEEEEECCC----cccccCCCcceEEecC--CCcEEEEEEecccccCCccccEEEEEc----------CCCCEEEEEc
Confidence 45688888877 55 4444422 235889999999 9 9988863 3467888888
Q ss_pred ccCc------ceeccCCCCccccccccceEEe----cCCcE-EEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 70 ETGE------AKPLFESPDICLNAVFGSFVWV----NNSTL-LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 70 ~~g~------~~~lt~~~~~~~~~~~~~~~ws----pdg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
.+++ .+.+...........+..+.|+ |+++. |+..+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------------------------------- 147 (397)
T 1sq9_A 99 TREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------------------------------- 147 (397)
T ss_dssp EECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------------------------
T ss_pred cCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------------------------
Confidence 8877 4445433210001146789999 99998 7765321
Q ss_pred hhccCChhhhhhhhhhcccEEEEEcc-C------C-Ccc-----cc-------CCc-cceeccccCCCCceEEEEecccC
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D------G-TAK-----DF-------GTP-AVYTAVEPSPDQKYVLITSMHRP 197 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~-~------G-~~~-----~l-------~~~-~~~~~~~~SpDGk~l~~~~~~~~ 197 (752)
+.|+++++ . + ... .+ ..+ ..+..+.|+||| .|+....+
T Consensus 148 ------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-- 206 (397)
T 1sq9_A 148 ------------------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-- 206 (397)
T ss_dssp ------------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT--
T ss_pred ------------------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC--
Confidence 45666666 4 4 222 33 122 678899999999 76665444
Q ss_pred ccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccce
Q 004456 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (752)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~ 277 (752)
+.+.+||+.+.+........... ......+..+.|+|||+. |+..... ...+.
T Consensus 207 -----------g~i~i~d~~~~~~~~~~~~~~~h------~~~~~~i~~i~~~~~~~~-l~~~~~d---------~~~g~ 259 (397)
T 1sq9_A 207 -----------GTVQISELSTLRPLYNFESQHSM------INNSNSIRSVKFSPQGSL-LAIAHDS---------NSFGC 259 (397)
T ss_dssp -----------SEEEEEETTTTEEEEEEECCC---------CCCCCEEEEEECSSTTE-EEEEEEE---------TTEEE
T ss_pred -----------CcEEEEECCCCceeEEEeccccc------cccCCccceEEECCCCCE-EEEEecC---------CCCce
Confidence 37999999876544332220000 000123678999999996 5544311 01147
Q ss_pred EEeccCCCCCCCCCeEEee-------------cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 278 IYTQPAEPAEGEKPEILHK-------------LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 278 l~~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
|.++|+. .+.....+.. ....+..++|+||++.|+... ....|.++++.++
T Consensus 260 i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 260 ITLYETE--FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG----WDGKLRFWDVKTK 323 (397)
T ss_dssp EEEEETT--TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT
T ss_pred EEEEECC--CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe----CCCeEEEEEcCCC
Confidence 8999983 2222333444 566788999999999988876 3446888888774
No 289
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.52 E-value=1.3e-13 Score=137.64 Aligned_cols=194 Identities=13% Similarity=0.123 Sum_probs=113.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCch-hHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVE 591 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~~~ 591 (752)
.|.||++||.+.. ...| ..+...|++.||.|++ .+.+|+|.+..... ......+|+.+.+
T Consensus 16 ~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~~~~vi~---~Dl~GhG~S~~~~~~~~~~~a~~l~~~l- 76 (264)
T 1r3d_A 16 TPLVVLVHGLLGS-----------GADW----QPVLSHLARTQCAALT---LDLPGHGTNPERHCDNFAEAVEMIEQTV- 76 (264)
T ss_dssp BCEEEEECCTTCC-----------GGGG----HHHHHHHTTSSCEEEE---ECCTTCSSCC-------CHHHHHHHHHH-
T ss_pred CCcEEEEcCCCCC-----------HHHH----HHHHHHhcccCceEEE---ecCCCCCCCCCCCccCHHHHHHHHHHHH-
Confidence 4889999996321 1111 2345566658999999 66778887754221 1223333333333
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHH---HHHhCCCceeEEEEccCCCCCCCCc-----------c-------Cccc--
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAH---LLAHAPHLFCCGIARSGSYNKTLTP-----------F-------GFQT-- 648 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~---~~~~~p~~~~~~v~~~~~~~~~~~~-----------~-------~~~~-- 648 (752)
+...++..++.|+||||||.+++. ++.++|++++++|+.++........ + ....
T Consensus 77 ---~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1r3d_A 77 ---QAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVL 153 (264)
T ss_dssp ---HTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred ---HHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHH
Confidence 322232224999999999999999 7788999999999887643211000 0 0000
Q ss_pred ---cccchh-----hhH----------------HHHHh------cChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHH
Q 004456 649 ---EFRTLW-----EAT----------------NVYIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 698 (752)
Q Consensus 649 ---~~~~~~-----~~~----------------~~~~~------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 698 (752)
.....+ ... ..+.. ......+.++++|+|+++|++|..++ .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~ 226 (264)
T 1r3d_A 154 SDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLA 226 (264)
T ss_dssp HHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHH
T ss_pred HHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHH
Confidence 000000 000 00000 01122345688999999999996432 223
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 699 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
+.+. .++++++++||... .+.++.+.+.+.+||.++.
T Consensus 227 ~~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 227 ESSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 3321 46899999999865 5668889999999998763
No 290
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.51 E-value=2.1e-12 Score=139.13 Aligned_cols=275 Identities=15% Similarity=0.116 Sum_probs=162.6
Q ss_pred cceeEEeecCCCCCCCCceee-cCCCCCceeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCC
Q 004456 4 FTGIGIHRLLPDDSLGPEKEV-HGYPDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~ 81 (752)
...|.++++.. ++...+ +.......+...+||| ||++|+.. +....|.++|++++..+.+....
T Consensus 141 dg~i~lWd~~~----~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~----------s~D~~v~iwd~~~~~~~~~~~~~ 206 (435)
T 4e54_B 141 GGDIMLWNFGI----KDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS----------SMEGTTRLQDFKGNILRVFASSD 206 (435)
T ss_dssp TSCEEEECSSC----CSCCEEECCCSSSCCCCEEEECSSCTTEEEEE----------CSSSCEEEEETTSCEEEEEECCS
T ss_pred CCEEEEEECCC----CCceeEEEccCCCCCEEEEEEeCCCCCEEEEE----------eCCCEEEEeeccCCceeEEeccC
Confidence 34678888866 543333 3222333689999999 67887765 33467888899887766554332
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.. ...+..+.|+||++.|+..+. .+.|++
T Consensus 207 ~~--~~~~~~~~~~~~~~~l~~g~~-------------------------------------------------dg~i~~ 235 (435)
T 4e54_B 207 TI--NIWFCSLDVSASSRMVVTGDN-------------------------------------------------VGNVIL 235 (435)
T ss_dssp SC--SCCCCCEEEETTTTEEEEECS-------------------------------------------------SSBEEE
T ss_pred CC--CccEEEEEECCCCCEEEEEeC-------------------------------------------------CCcEee
Confidence 21 112457899999998887632 157899
Q ss_pred EccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 162 GSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 162 ~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
+|++| ....+..+ ..+..++|+|+++.++++.... ..|.+||+........... ...
T Consensus 236 wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d------------~~v~iwd~~~~~~~~~~~~---------~~~ 294 (435)
T 4e54_B 236 LNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD------------QTVKIWDLRQVRGKASFLY---------SLP 294 (435)
T ss_dssp EESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT------------SBCCEEETTTCCSSSCCSB---------CCB
T ss_pred eccCcceeEEEecccceEEeeeecCCCceEEEEecCc------------ceeeEEecccccccceEEE---------eee
Confidence 99976 55555555 7888999999999777665442 3788999875432111100 011
Q ss_pred ccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc------cceeeeeeecCCceE
Q 004456 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFRSVSWCDDSLAL 313 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~------~~~~~~~~spDg~~l 313 (752)
+...+..++|+|||+. |+..+ ..+.|.+|++. .+..+..+.... .......|+|++..+
T Consensus 295 h~~~v~~~~~spdg~~-l~s~~------------~D~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (435)
T 4e54_B 295 HRHPVNAACFSPDGAR-LLTTD------------QKSEIRVYSAS--QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLI 359 (435)
T ss_dssp CSSCEEECCBCTTSSE-EEEEE------------SSSCEEEEESS--SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCE
T ss_pred ccccccceeECCCCCe-eEEEc------------CCCEEEEEECC--CCccceEEecccccccccceeEEEEEcCCCCEE
Confidence 2234678999999997 55553 33468888873 222333332211 122345688888877
Q ss_pred EEeeeccc--------CceeEEEEcCCCCCccceeccccccccccCCCCCCce-eeCCCCCeEEEeeeecCCcceEEEEc
Q 004456 314 VNETWYKT--------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAKIKKENDEQIYILLN 384 (752)
Q Consensus 314 ~~~~~~~~--------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~-~~s~dg~~l~~~~~~~~~~~~~~~~~ 384 (752)
+.....+. ....|.+++..++. ....+...... ....+ +|||||++|+... +
T Consensus 360 ~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~-~~~~l~~~~~~------~v~s~~~fspdg~~lasg~-d----------- 420 (435)
T 4e54_B 360 VVGRYPDPNFKSCTPYELRTIDVFDGNSGK-MMCQLYDPESS------GISSLNEFNPMGDTLASAM-G----------- 420 (435)
T ss_dssp EEECCCCTTSCCSSTTCCCCEEEECSSSCC-EEEEECCSSCC------CCCCEEEECTTSSCEEEEC-S-----------
T ss_pred EEEEcCCCCeEEEEecCCCEEEEEECCCCc-EEEEEeCCCCC------cEEEEEEECCCCCEEEEEc-C-----------
Confidence 76542211 22357888887741 11222222211 11223 5899999887654 1
Q ss_pred cCCCCCCCCCCeeEEEecCCCcee
Q 004456 385 GRGFTPEGNIPFLDLFDINTGSKE 408 (752)
Q Consensus 385 ~~g~~~~~~~~~l~~~d~~~g~~~ 408 (752)
..|.+||+++|+.+
T Consensus 421 ----------~~i~iW~~~~gk~r 434 (435)
T 4e54_B 421 ----------YHILIWSQQEARTR 434 (435)
T ss_dssp ----------SEEEECCCC-----
T ss_pred ----------CcEEEEECCcCeee
Confidence 14889999888765
No 291
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.51 E-value=2.9e-12 Score=135.39 Aligned_cols=255 Identities=13% Similarity=0.061 Sum_probs=152.7
Q ss_pred ceeEEeecCCCCCCCCceeecCC-CCCceeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
..|.++++.. ++....... .....+....||| |+++|+..+ ....|.++++.+...+.+.....
T Consensus 96 g~i~iwd~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~ 161 (383)
T 3ei3_B 96 GDIILWDYDV----QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS----------IRGATTLRDFSGSVIQVFAKTDS 161 (383)
T ss_dssp SCEEEEETTS----TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE----------TTTEEEEEETTSCEEEEEECCCC
T ss_pred CeEEEEeCCC----cccceeeecCCcCCceeEEEeCCCCCCEEEEEe----------CCCEEEEEECCCCceEEEeccCC
Confidence 4678888876 555544322 2334689999999 677777653 34689999998866666643332
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
. ...+..+.|+||++.|+..+. .+.|+++
T Consensus 162 ~--~~~v~~~~~~~~~~~l~~~~~-------------------------------------------------d~~i~i~ 190 (383)
T 3ei3_B 162 W--DYWYCCVDVSVSRQMLATGDS-------------------------------------------------TGRLLLL 190 (383)
T ss_dssp S--SCCEEEEEEETTTTEEEEEET-------------------------------------------------TSEEEEE
T ss_pred C--CCCeEEEEECCCCCEEEEECC-------------------------------------------------CCCEEEE
Confidence 1 113678899999998887632 1688999
Q ss_pred ccCC-CccccCCc-cceeccccCCCCc-eEEEEecccCccccccccCccccEEEEecCC----ceeEEecCCCCCCCCCc
Q 004456 163 SLDG-TAKDFGTP-AVYTAVEPSPDQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPPAEDIPV 235 (752)
Q Consensus 163 ~~~G-~~~~l~~~-~~~~~~~~SpDGk-~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~ 235 (752)
++++ ....+..+ ..+..++|+|||+ .|+..+.+ +.+.+||+.. +.........
T Consensus 191 d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~------- 250 (383)
T 3ei3_B 191 GLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD-------------ATVKLWDLRNIKDKNSYIAEMPHE------- 250 (383)
T ss_dssp ETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT-------------SEEEEEEGGGCCSTTCEEEEEECS-------
T ss_pred ECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC-------------CEEEEEeCCCCCcccceEEEecCC-------
Confidence 9966 44455545 7889999999999 45444433 3799999875 3222222211
Q ss_pred ccCCccccccceeeee-CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc------ceeeeeeec
Q 004456 236 CYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFRSVSWCD 308 (752)
Q Consensus 236 ~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~------~~~~~~~sp 308 (752)
..+..+.|+| ||+. |+..+ ..+.|.+||+. .+.....+..... ......|+|
T Consensus 251 ------~~v~~~~~s~~~~~~-l~~~~------------~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p 309 (383)
T 3ei3_B 251 ------KPVNAAYFNPTDSTK-LLTTD------------QRNEIRVYSSY--DWSKPDQIIIHPHRQFQHLTPIKATWHP 309 (383)
T ss_dssp ------SCEEEEEECTTTSCE-EEEEE------------SSSEEEEEETT--BTTSCSEEEECCBCCCTTSCCCCCEECS
T ss_pred ------CceEEEEEcCCCCCE-EEEEc------------CCCcEEEEECC--CCccccccccccccccccccceEEeccC
Confidence 2367899999 9996 55553 33478888884 2233344432210 111234555
Q ss_pred CCceEEEeee-----cccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 309 DSLALVNETW-----YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 309 Dg~~l~~~~~-----~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
++..++.... ..+....|.++++.++. ....+....... ..-.++|+|||++|+..+
T Consensus 310 ~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~-----~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 310 MYDLIVAGRYPDDQLLLNDKRTIDIYDANSGG-LVHQLRDPNAAG-----IISLNKFSPTGDVLASGM 371 (383)
T ss_dssp SSSEEEEECBCCTTTCTTCCCCEEEEETTTCC-EEEEECBTTBCS-----CCCEEEECTTSSEEEEEE
T ss_pred CCCceEEEecCCcccccCCCCeEEEEecCCCc-eeeeecCCCCCc-----eEEEEEEecCccEEEEec
Confidence 5544433211 01134568888987742 112222111111 111247999999887775
No 292
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.50 E-value=2.4e-13 Score=139.55 Aligned_cols=211 Identities=10% Similarity=-0.025 Sum_probs=124.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+..... + .++.|.||++||.+... ..|. .+...|+ ..|.|++ .+.+|+
T Consensus 28 ~~g~~l~y~~~---G-----~g~~~~vvllHG~~~~~-----------~~w~----~~~~~L~-~~~~via---~Dl~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDS---E-----KHAENAVIFLHGNATSS-----------YLWR----HVVPHIE-PVARCII---PDLIGM 80 (318)
T ss_dssp ETTEEEEEEEC---C-----SCTTSEEEEECCTTCCG-----------GGGT----TTGGGTT-TTSEEEE---ECCTTS
T ss_pred eCCeEEEEEEc---C-----CCCCCeEEEECCCCCcH-----------HHHH----HHHHHhh-hcCeEEE---EeCCCC
Confidence 36766665543 1 12247899999964211 1222 1233344 4579999 567788
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC----C
Q 004456 570 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT----L 641 (752)
Q Consensus 570 g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~----~ 641 (752)
|.+.... .......+|+.+.++.+ +. +++.|+||||||.+|+.+|.++|++++++|++++..... .
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 154 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL------NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS------CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc------CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh
Confidence 8775431 22444455554444332 23 689999999999999999999999999999976432110 0
Q ss_pred CccC------c--c--------c----------c--ccchhhhHHHH-----------------HhcCh-----------
Q 004456 642 TPFG------F--Q--------T----------E--FRTLWEATNVY-----------------IEMSP----------- 665 (752)
Q Consensus 642 ~~~~------~--~--------~----------~--~~~~~~~~~~~-----------------~~~~~----------- 665 (752)
.+.. + . . . .....+....+ ....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
T 2psd_A 155 WPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQ 234 (318)
T ss_dssp SCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHH
T ss_pred hhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHH
Confidence 0000 0 0 0 0 00000000000 00000
Q ss_pred -----hhhcCCC-CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHH
Q 004456 666 -----ITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 666 -----~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
...+.++ ++|+|+++|++| .++ . .++++.+.+ ...+++++ ++||... .+.++.+.+.+.+||.+
T Consensus 235 ~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 235 IVRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKF----PNTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTS----SSEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhC----CCcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHH
Confidence 0123456 899999999999 876 5 554444333 34678888 6799765 66788999999999998
Q ss_pred HhcC
Q 004456 740 YCLS 743 (752)
Q Consensus 740 ~l~~ 743 (752)
....
T Consensus 305 ~~~~ 308 (318)
T 2psd_A 305 VLKN 308 (318)
T ss_dssp HHC-
T ss_pred hhcc
Confidence 7644
No 293
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.50 E-value=5.1e-12 Score=134.78 Aligned_cols=245 Identities=16% Similarity=0.147 Sum_probs=160.4
Q ss_pred ceeEEeecCCCCCCCCc-eeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 5 TGIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
..|.++++.. |+. +.+.+.. ..+....|+|||+.||..+ ....|.++++.+++..+.......
T Consensus 130 g~i~vwd~~~----~~~~~~l~~h~--~~V~~v~~~~~~~~l~sgs----------~D~~i~iwd~~~~~~~~~~~~h~~ 193 (410)
T 1vyh_C 130 ATIKVWDYET----GDFERTLKGHT--DSVQDISFDHSGKLLASCS----------ADMTIKLWDFQGFECIRTMHGHDH 193 (410)
T ss_dssp SCEEEEETTT----CCCCEEECCCS--SCEEEEEECTTSSEEEEEE----------TTSCCCEEETTSSCEEECCCCCSS
T ss_pred CeEEEEECCC----CcEEEEEeccC--CcEEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCceeEEEcCCCC
Confidence 4677888766 543 3344322 2588899999999988764 336778888888775443322221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+..+.|+|+|+.|+..+.+ +.|.+||
T Consensus 194 ----~V~~v~~~p~~~~l~s~s~D-------------------------------------------------~~i~~wd 220 (410)
T 1vyh_C 194 ----NVSSVSIMPNGDHIVSASRD-------------------------------------------------KTIKMWE 220 (410)
T ss_dssp ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CeEEEEE
Confidence 46788999999988866321 5789999
Q ss_pred c-CCC-ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCC
Q 004456 164 L-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNS 239 (752)
Q Consensus 164 ~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~ 239 (752)
+ +|. ...+..+ ..+..+.|+|||+.|+..+.+. .+.+||+.+++... +....
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~-------------~v~vwd~~~~~~~~~~~~h~----------- 276 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-------------TVRVWVVATKECKAELREHR----------- 276 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTCCEEEEECCCS-----------
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC-------------eEEEEECCCCceeeEecCCC-----------
Confidence 8 663 3444444 6788999999999998876663 79999998765443 22221
Q ss_pred ccccccceeeeeCC--------------------CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc
Q 004456 240 VREGMRSISWRADK--------------------PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL 299 (752)
Q Consensus 240 ~~~~~~~~~wspDG--------------------~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 299 (752)
..+..+.|+|++ .. |+..+ ..+.|.+||+. .+.....+.....
T Consensus 277 --~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~sgs------------~D~~i~iwd~~--~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 277 --HVVECISWAPESSYSSISEATGSETKKSGKPGPF-LLSGS------------RDKTIKMWDVS--TGMCLMTLVGHDN 339 (410)
T ss_dssp --SCEEEEEECCSCGGGGGGGCCSCC-------CCE-EEEEE------------TTSEEEEEETT--TTEEEEEEECCSS
T ss_pred --ceEEEEEEcCcccccchhhhccccccccCCCCCE-EEEEe------------CCCeEEEEECC--CCceEEEEECCCC
Confidence 125678888874 32 33222 34478899983 2223344555566
Q ss_pred ceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 300 ~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.+..++|+|+|+.|+.++ ....|.++++.++. ....+..+. . ..-.++|+|++.+|+..+
T Consensus 340 ~v~~v~~~~~g~~l~s~s----~D~~i~vwd~~~~~-~~~~~~~h~-~------~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCA----DDKTLRVWDYKNKR-CMKTLNAHE-H------FVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp CEEEEEECSSSSCEEEEE----TTTEEEEECCTTSC-CCEEEECCS-S------CEEEEEECSSSSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCc-eEEEEcCCC-C------cEEEEEEcCCCCEEEEEe
Confidence 788999999999988876 33468888887642 122222111 1 111267999999988776
No 294
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.50 E-value=1.1e-13 Score=146.05 Aligned_cols=233 Identities=12% Similarity=0.075 Sum_probs=137.2
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||..+ ....|.++++.++..+.+.....+ ...+..+.|+|||+.|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d---- 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT----------ATNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQD---- 76 (377)
T ss_dssp CCSCCEECSSSSEEECCC----------SSSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETT----
T ss_pred cEEEEEECCCCCEEEEec----------CCCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCC----
Confidence 478899999999998853 346777778777732222111111 1146788999999988876421
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC----ccccCCc-cceeccccCCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFGTP-AVYTAVEPSPD 185 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~----~~~l~~~-~~~~~~~~SpD 185 (752)
+.|.++++ +++ ...+..+ ..+..++|+||
T Consensus 77 ---------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 77 ---------------------------------------------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp ---------------------------------------------SSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred ---------------------------------------------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 46788888 444 2333344 78889999999
Q ss_pred CceEEEEecccCccccccccCccccEEEEecCCce----eEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 186 Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
|+.|+..+.+. .+.+|++.+++ .+.+... ....+..++|+|||+. |+..+
T Consensus 112 ~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~-l~~~~ 165 (377)
T 3dwl_C 112 EDKFAVGSGAR-------------VISVCYFEQENDWWVSKHLKRP------------LRSTILSLDWHPNNVL-LAAGC 165 (377)
T ss_dssp SSCCEEEESSS-------------CEEECCC-----CCCCEEECSS------------CCSCEEEEEECTTSSE-EEEEE
T ss_pred CCEEEEEecCC-------------eEEEEEECCcccceeeeEeecc------------cCCCeEEEEEcCCCCE-EEEEe
Confidence 99999886653 78999998765 2333321 1123678999999986 55553
Q ss_pred eccCCCCccccCccceEEeccCCCCC--C--------C--C-CeEEe--ecccceeeeeeecCCceEEEeeecccCceeE
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAE--G--------E--K-PEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRT 326 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~--~--------~--~-~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l 326 (752)
..+.+.++|+.... . . . ...+. .....+..++|+|||+.|+... ....|
T Consensus 166 ------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----~d~~i 229 (377)
T 3dwl_C 166 ------------ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG----HDSSV 229 (377)
T ss_dssp ------------SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE----TTTEE
T ss_pred ------------CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe----CCCcE
Confidence 23357777762100 0 0 0 11111 3445578899999999998876 33357
Q ss_pred EEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.++++.++...+..+....... ...-.++|+|||++|+...
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQ----LPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSS----SCEEEEEEEETTEEEEEES
T ss_pred EEEECCCCCCcceeeEeecCCC----CceEEEEEcCCCCEEEEEc
Confidence 7777776421111121111110 0111367999999887664
No 295
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.50 E-value=1e-11 Score=132.08 Aligned_cols=293 Identities=11% Similarity=0.068 Sum_probs=169.7
Q ss_pred ceeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC---------ccccccccceEEec-CCc
Q 004456 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD---------ICLNAVFGSFVWVN-NST 99 (752)
Q Consensus 31 ~~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~---------~~~~~~~~~~~wsp-dg~ 99 (752)
..+...+||| ||++||... ..+.|.++++++++......... ......+..+.|+| +++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGG----------SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEE----------TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred CcEEEEEEecCCCCEEEEEc----------CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 3689999999 999998863 34678888988876544322000 00112467889999 666
Q ss_pred EEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cce
Q 004456 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVY 177 (752)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~ 177 (752)
.|+..+. .+.|.++++ +++....... ..+
T Consensus 114 ~l~s~~~-------------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~ 144 (408)
T 4a11_B 114 MFTSSSF-------------------------------------------------DKTLKVWDTNTLQTADVFNFEETV 144 (408)
T ss_dssp CEEEEET-------------------------------------------------TSEEEEEETTTTEEEEEEECSSCE
T ss_pred EEEEEeC-------------------------------------------------CCeEEEeeCCCCccceeccCCCce
Confidence 6665422 157889998 5543333223 566
Q ss_pred eccccCCC---CceEEEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 178 TAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 178 ~~~~~SpD---Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
..+.|+|+ ++.|+....+ +.+.+||+.+++.. .+.... ..+..++|+|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~~~~~-------------~~v~~~~~~~~~ 198 (408)
T 4a11_B 145 YSHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGHR-------------QEILAVSWSPRY 198 (408)
T ss_dssp EEEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEECCCC-------------SCEEEEEECSSC
T ss_pred eeeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeeecCCC-------------CcEEEEEECCCC
Confidence 67777774 4577776554 37999999866433 222221 236789999999
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE---------------eecccceeeeeeecCCceEEEeee
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL---------------HKLDLRFRSVSWCDDSLALVNETW 318 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~spDg~~l~~~~~ 318 (752)
+. ++++.. ..+.+.++|+... ......+ ......+..++|+|||+.|+...
T Consensus 199 ~~-ll~~~~-----------~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 264 (408)
T 4a11_B 199 DY-ILATAS-----------ADSRVKLWDVRRA-SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG- 264 (408)
T ss_dssp TT-EEEEEE-----------TTSCEEEEETTCS-SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-
T ss_pred Cc-EEEEEc-----------CCCcEEEEECCCC-CcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-
Confidence 97 555442 2336777777311 1111222 23445678899999999998876
Q ss_pred cccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeE
Q 004456 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLD 398 (752)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 398 (752)
....|.++++.++ +.............. ...........+..+++...+ ..|.
T Consensus 265 ---~dg~i~vwd~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------------~~i~ 317 (408)
T 4a11_B 265 ---TDNRMRLWNSSNG--ENTLVNYGKVCNNSK-KGLKFTVSCGCSSEFVFVPYG---------------------STIA 317 (408)
T ss_dssp ---TTSCEEEEETTTC--CBCCCCCCCCCCCCS-SCCCCEECCSSSSCEEEEEET---------------------TEEE
T ss_pred ---CCCeEEEEECCCC--ccceecccccccccc-ccceeEEecCCCceEEEEecC---------------------CEEE
Confidence 3335888888774 222211111100000 011111112233344444321 1599
Q ss_pred EEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCe
Q 004456 399 LFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (752)
Q Consensus 399 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~ 464 (752)
+||+.+++.......... .+.. ++|+||++.|+.... ...|++||+.+++.
T Consensus 318 v~d~~~~~~~~~~~~~~~----~v~~-------~~~s~~~~~l~s~~~----dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYK----TVDC-------CVFQSNFQELYSGSR----DCNILAWVPSLYEP 368 (408)
T ss_dssp EEETTTCCEEEEECCCSS----CEEE-------EEEETTTTEEEEEET----TSCEEEEEECC---
T ss_pred EEECcCCcceeeeccCCC----eEEE-------EEEcCCCCEEEEECC----CCeEEEEeCCCCCc
Confidence 999998877555443221 1222 589999998875443 23588899887654
No 296
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.49 E-value=5e-13 Score=140.10 Aligned_cols=202 Identities=10% Similarity=0.038 Sum_probs=130.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.++..+|||||++||.++. +....|.|+|+++++......+.. .+..++|||||++|+..+.
T Consensus 135 ~~~~v~fSpDg~~la~as~--------~~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~~l~s~s~----- 196 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASS--------KVPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGKVVAYITG----- 196 (365)
T ss_dssp CEEEEEECTTSSCEEEEES--------CSSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSSEEEEECS-----
T ss_pred CEEEEEEcCCCCEEEEEEC--------CCCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCceEEeccc-----
Confidence 3566899999999998653 445789999999888665543332 4678899999999987632
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-ccc--CCc-cceeccccCCCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDF--GTP-AVYTAVEPSPDQ 186 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l--~~~-~~~~~~~~SpDG 186 (752)
..+.+++. +|.. ... ..+ ..+..++|||||
T Consensus 197 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg 231 (365)
T 4h5i_A 197 ---------------------------------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD 231 (365)
T ss_dssp ---------------------------------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT
T ss_pred ---------------------------------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC
Confidence 23455555 5632 222 222 667899999999
Q ss_pred ceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCC
Q 004456 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (752)
Q Consensus 187 k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~ 266 (752)
+.|+..+.+... ...++.|++.......+.... +......+..++|||||+. |+..+
T Consensus 232 ~~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~V~~~~~Spdg~~-lasgs----- 288 (365)
T 4h5i_A 232 TVLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQ--------VTNRFKGITSMDVDMKGEL-AVLAS----- 288 (365)
T ss_dssp EEEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEE--------EESSCSCEEEEEECTTSCE-EEEEE-----
T ss_pred CEEEEEecCCcc---------eeEEeecccccceecceeeee--------ecCCCCCeEeEEECCCCCc-eEEEc-----
Confidence 999988765421 125677777655432211100 0011123678999999996 65554
Q ss_pred CCccccCccceEEeccCCCCCCCCC-eEEe-ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 267 DANVEVSPRDIIYTQPAEPAEGEKP-EILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
..+.|.+||+ .+++. ..+. .....+..++|||||+.|+.++.+ ..|.++++..
T Consensus 289 -------~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D----~tvrvw~ip~ 343 (365)
T 4h5i_A 289 -------NDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA----NTIHIIKLPL 343 (365)
T ss_dssp -------TTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT----SEEEEEECCT
T ss_pred -------CCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC----CeEEEEEcCC
Confidence 3347889998 33332 2222 345678999999999999987732 2466666544
No 297
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.49 E-value=2.9e-12 Score=136.45 Aligned_cols=293 Identities=11% Similarity=0.025 Sum_probs=170.5
Q ss_pred ceeEecCCCCeEEEeeccccccccccCcceEEEEEcccC-cc-eeccCCCCccccccccceEEec-CCcEEEEEecCCCC
Q 004456 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EA-KPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRR 110 (752)
Q Consensus 34 ~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g-~~-~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~~ 110 (752)
....++|+...+++.. ..++.|.|++++.. +. ..+.....+ ...+..+.|+| +++.|+..+.+
T Consensus 38 ~~~~~~~~~~~~~~~~---------~~~g~i~v~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~s~d--- 103 (402)
T 2aq5_A 38 GFCAVNPKFMALICEA---------SGGGAFLVLPLGKTGRVDKNVPLVCGH--TAPVLDIAWCPHNDNVIASGSED--- 103 (402)
T ss_dssp CSEEECSSEEEEEBCC---------SSSCCEEEEETTCCEECCTTCCCBCCC--SSCEEEEEECTTCTTEEEEEETT---
T ss_pred CcEEECCCeEEEEEEE---------cCCCEEEEEECccCCCCCCCCceEecC--CCCEEEEEeCCCCCCEEEEEeCC---
Confidence 3466777765554422 44578999998543 21 111111111 12477899999 88888766321
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC--------ccccCCc-cceecc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--------AKDFGTP-AVYTAV 180 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~--------~~~l~~~-~~~~~~ 180 (752)
+.|.++++ ++. ...+..+ ..+..+
T Consensus 104 ----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 137 (402)
T 2aq5_A 104 ----------------------------------------------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIV 137 (402)
T ss_dssp ----------------------------------------------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEE
T ss_pred ----------------------------------------------CeEEEEEccCCCCccccCCceEEecCCCCeEEEE
Confidence 57888888 442 2233334 678899
Q ss_pred ccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEE
Q 004456 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (752)
Q Consensus 181 ~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~ 260 (752)
+|+|||+.++++.... +.|.+||+.+++........ .....+..++|+|||+. |+..
T Consensus 138 ~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~-l~~~ 194 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCD------------NVILVWDVGTGAAVLTLGPD----------VHPDTIYSVDWSRDGAL-ICTS 194 (402)
T ss_dssp EECSSBTTEEEEEETT------------SCEEEEETTTTEEEEEECTT----------TCCSCEEEEEECTTSSC-EEEE
T ss_pred EECcCCCCEEEEEcCC------------CEEEEEECCCCCccEEEecC----------CCCCceEEEEECCCCCE-EEEE
Confidence 9999996444443332 37999999877654332100 01123678999999997 6665
Q ss_pred EeccCCCCccccCccceEEeccCCCCCCCCC-eEE-eeccc-ceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCcc
Q 004456 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EIL-HKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 337 (752)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l-~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 337 (752)
+ ..+.|.++|+ ..+.. ..+ ..... .+..+.|+|||+.|+.+. .......|.++++.+.. .
T Consensus 195 ~------------~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~~~~d~~i~iwd~~~~~-~ 257 (402)
T 2aq5_A 195 C------------RDKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGF-SRMSERQVALWDTKHLE-E 257 (402)
T ss_dssp E------------TTSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEE-CTTCCEEEEEEETTBCS-S
T ss_pred e------------cCCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEec-cCCCCceEEEEcCcccc-C
Confidence 4 3457899998 33332 223 12222 367889999999877763 12245679999988742 2
Q ss_pred ceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc--eeEEeeccc
Q 004456 338 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNR 415 (752)
Q Consensus 338 ~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~~~~~ 415 (752)
+.......... ..-.++|+|||++|++.... ...|.+||+.+++ .+.+..-..
T Consensus 258 ~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~g~~--------------------dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 258 PLSLQELDTSS-----GVLLPFFDPDTNIVYLCGKG--------------------DSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp CSEEEECCCCS-----SCEEEEEETTTTEEEEEETT--------------------CSCEEEEEECSSTTCEEEEEEECC
T ss_pred CceEEeccCCC-----ceeEEEEcCCCCEEEEEEcC--------------------CCeEEEEEecCCCcceEeeccccc
Confidence 12222111111 12236799999998776521 1148899998877 444432211
Q ss_pred hhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEe
Q 004456 416 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (752)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~l 467 (752)
. .....++|+||+..++. . -..+..+++.++..+.+
T Consensus 313 ~----------~~v~~~~~sp~~~~~~s---~---~~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 313 K----------ESQRGMGYMPKRGLEVN---K---CEIARFYKLHERKCEPI 348 (402)
T ss_dssp S----------SCCSEEEECCGGGSCGG---G---TEEEEEEEEETTEEEEE
T ss_pred C----------CcccceEEeccccccee---c---ceeEEEEEcCCCcEEEE
Confidence 0 12234588999887642 1 22566777666655444
No 298
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.49 E-value=5.9e-12 Score=133.51 Aligned_cols=204 Identities=18% Similarity=0.155 Sum_probs=133.3
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
+...+|||||++||..+ ....|.++++++++.......... .+..+.|+|||+.|+..+.+
T Consensus 126 v~~v~~s~dg~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~d----- 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA----------EDRLIRIWDIENRKIVMILQGHEQ----DIYSLDYFPSGDKLVSGSGD----- 186 (393)
T ss_dssp EEEEEECTTSSEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETT-----
T ss_pred EEEEEECCCCCEEEEEc----------CCCeEEEEECCCCcEEEEEccCCC----CEEEEEEcCCCCEEEEecCC-----
Confidence 77899999999998863 346899999988876544332221 46788999999988866321
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCCccceeccccCC-CCceE
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSP-DQKYV 189 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~~~~~~~~~~Sp-DGk~l 189 (752)
+.|.+||+ +|+.. .+.....+..+.|+| ||+.|
T Consensus 187 --------------------------------------------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 187 --------------------------------------------RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp --------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred --------------------------------------------CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 57888998 66433 333336788899999 89999
Q ss_pred EEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCc
Q 004456 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (752)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~ 269 (752)
+..+.+. .+.+||+.++........... ........+..++|+|||+. |+..+
T Consensus 223 ~~~s~d~-------------~v~iwd~~~~~~~~~~~~~~~-----~~~~h~~~v~~v~~~~~g~~-l~s~s-------- 275 (393)
T 1erj_A 223 AAGSLDR-------------AVRVWDSETGFLVERLDSENE-----SGTGHKDSVYSVVFTRDGQS-VVSGS-------- 275 (393)
T ss_dssp EEEETTS-------------CEEEEETTTCCEEEEEC-----------CCCSSCEEEEEECTTSSE-EEEEE--------
T ss_pred EEEcCCC-------------cEEEEECCCCcEEEeeccccc-----CCCCCCCCEEEEEECCCCCE-EEEEe--------
Confidence 8876653 799999987654332211100 00112234678999999996 55443
Q ss_pred cccCccceEEeccCCCCCC----------CCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 270 VEVSPRDIIYTQPAEPAEG----------EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~----------~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
..+.+.+||+..... .....+......+..++|+|+++.|+.++ ....|.++++.++
T Consensus 276 ----~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs----~D~~v~iwd~~~~ 342 (393)
T 1erj_A 276 ----LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS----KDRGVLFWDKKSG 342 (393)
T ss_dssp ----TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE----TTSEEEEEETTTC
T ss_pred ----CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe----CCCeEEEEECCCC
Confidence 334678888731100 00112233445578899999999988776 3346888888774
No 299
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.48 E-value=2.9e-14 Score=143.69 Aligned_cols=227 Identities=14% Similarity=0.028 Sum_probs=115.2
Q ss_pred CceEEEEEEcCCCcE-EEEEEEeCCCCC-C---CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC
Q 004456 480 LQKEMIKYQRKDGVP-LTATLYLPPGYD-Q---SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (752)
Q Consensus 480 ~~~~~~~~~~~~g~~-~~~~l~~P~~~~-~---~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 554 (752)
+..|.+.|++.++.. ...++..+.... + ......|.||++||.+.. ...| ..++..|.+
T Consensus 13 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~-----------~~~~----~~l~~~L~~- 76 (280)
T 3qmv_A 13 LGTENLYFQSNALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGT-----------VSAF----RGWQERLGD- 76 (280)
T ss_dssp ---------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCC-----------GGGG----TTHHHHHCT-
T ss_pred cCcceeeeecchhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCC-----------hHHH----HHHHHhcCC-
Confidence 467778887665532 222333222100 0 011124899999996421 1112 234556655
Q ss_pred CcEEEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee----
Q 004456 555 RFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC---- 628 (752)
Q Consensus 555 G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~---- 628 (752)
||.|++ .+.+|+|.+... ........+++.+.++.+. ...++.|+||||||.+|+.++.+.|+++.
T Consensus 77 ~~~v~~---~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~ 148 (280)
T 3qmv_A 77 EVAVVP---VQLPGRGLRLRERPYDTMEPLAEAVADALEEHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPR 148 (280)
T ss_dssp TEEEEE---CCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CceEEE---EeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCce
Confidence 999999 556677765332 2234555666555554432 23689999999999999999999877665
Q ss_pred EEEEccCCCCCCCCccCccc-cc------------------------cch----hhhHHHHHhcChhhhcCCCCCCEEEE
Q 004456 629 CGIARSGSYNKTLTPFGFQT-EF------------------------RTL----WEATNVYIEMSPITHANKIKKPILII 679 (752)
Q Consensus 629 ~~v~~~~~~~~~~~~~~~~~-~~------------------------~~~----~~~~~~~~~~~~~~~~~~~~~P~li~ 679 (752)
.+++.+.............. .. ... ........... ......+++|+|++
T Consensus 149 ~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i 227 (280)
T 3qmv_A 149 HLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYD-WHPRPPLDCPTTAF 227 (280)
T ss_dssp CEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCC-CCCCCCBCSCEEEE
T ss_pred EEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhcc-ccCCCceecCeEEE
Confidence 55554432110000000000 00 000 00000011111 11135678999999
Q ss_pred EeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCc-cccHHHHHHHHHHHH
Q 004456 680 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA-RENVMHVIWETDRWL 737 (752)
Q Consensus 680 ~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl 737 (752)
+|++|..+| ...++.+.+.+ ....+++++++ ||.... .+....+.+.+.+||
T Consensus 228 ~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 228 SAAADPIAT--PEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEEECSSSC--HHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHHHHHHHHHHHTTC
T ss_pred EecCCCCcC--hHHHHHHHHhc---CCceEEEEecC-CCeEEcCchhHHHHHHHHHhhC
Confidence 999999998 77766554433 23467888875 897653 244555666665553
No 300
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.48 E-value=8.2e-13 Score=132.50 Aligned_cols=214 Identities=14% Similarity=0.032 Sum_probs=127.7
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|..+++... +.+ . ..|.||++||.+... ..| ......| +.+|.|++ .|.+|+
T Consensus 11 ~~g~~l~y~~~-~~G-----~-~~p~vvllHG~~~~~-----------~~w----~~~~~~L-~~~~rvia---~DlrGh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD-----T-DGPAILLLPGWCHDH-----------RVY----KYLIQEL-DADFRVIV---PNWRGH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC-----C-SSCEEEEECCTTCCG-----------GGG----HHHHHHH-TTTSCEEE---ECCTTC
T ss_pred eCCeEEEEEEe-cCC-----C-CCCeEEEECCCCCcH-----------HHH----HHHHHHH-hcCCEEEE---eCCCCC
Confidence 36766665443 112 1 148899999953210 111 1234444 46799999 667788
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCCCc---
Q 004456 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLTP--- 643 (752)
Q Consensus 570 g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-p~~~~~~v~~~~~~~~~~~~--- 643 (752)
|.+..+ ........+|+.+.++.+. .+++.|+||||||.+++.++.++ |++++++|++++........
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l~------~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQLG------VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHHT------CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhC------CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 877543 2345677788887777762 36899999999999999999999 99999999987642100000
Q ss_pred --------cCccc-----------cccc-----------------hhhhH-H----HHHh-cChhhhcCCCCCCEEEEEe
Q 004456 644 --------FGFQT-----------EFRT-----------------LWEAT-N----VYIE-MSPITHANKIKKPILIIHG 681 (752)
Q Consensus 644 --------~~~~~-----------~~~~-----------------~~~~~-~----~~~~-~~~~~~~~~~~~P~li~~G 681 (752)
..+.. .... .|... . .+.. ..+...+.++++|+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~ 218 (276)
T 2wj6_A 139 SLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEE
T ss_pred HhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEE
Confidence 00000 0000 00000 0 0000 1122345678899999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 682 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 682 ~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
..+...+ .. ....+.+.+.-...+++++|++||... .+.++.+.+.+.+||.+.
T Consensus 219 ~~~~~~~--~~--~~~~~~~~~~~p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 219 FSQPTEP--EY--EKINSDFAEQHPWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCSCSH--HH--HHHHHHHHHHCTTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred ecCccch--hH--HHHHHHHHhhCCCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 5443322 11 111222322224579999999999765 566889999999999864
No 301
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.48 E-value=5.6e-12 Score=131.09 Aligned_cols=289 Identities=10% Similarity=-0.054 Sum_probs=154.2
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
...|+++++.. ++..+....+.......++|||||++++++. .....|+++++++++..........
T Consensus 20 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---------~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 20 PNNLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------NHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TTEEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCeEEEEECCC----CcEEEEEecCCCCCCceeEECCCCCEEEEEe---------CCCCcEEEEeCCCCcEEEEEEcccc
Confidence 35678888866 6654443333311477899999999887653 3347899999998876543222210
Q ss_pred --cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 84 --CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 84 --~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.....+..+.|||||+.|++......... ..+. .....|++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-----------------------~~~~--------------~~~~~i~~ 129 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLN-----------------------DHYV--------------VKPPRLEV 129 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECS-----------------------SCEE--------------ECCCEEEE
T ss_pred cccccccccceEECCCCCEEEEEcccccccc-----------------------cccc--------------cCCCeEEE
Confidence 00002467899999999998742100000 0000 01258999
Q ss_pred Ecc-CCCccccC----CccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcc
Q 004456 162 GSL-DGTAKDFG----TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (752)
Q Consensus 162 ~~~-~G~~~~l~----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 236 (752)
+|+ +|+..... .+..+..++|||||+ |++. . .++++||+.+++.......... ..+..
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~--~-------------~~i~~~d~~~~~~~~~~~~~~~-~~~~~ 192 (349)
T 1jmx_B 130 FSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA--G-------------PDIYKMDVKTGKYTVALPLRNW-NRKGY 192 (349)
T ss_dssp EEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE--S-------------SSEEEECTTTCCEEEEECSTTC-CCTTB
T ss_pred EECCCccccceeeeccCCCcccceeECCCCc-EEEc--c-------------CcEEEEeCCCCceecccccccc-CCccc
Confidence 998 54332221 124466777999999 6653 1 2589999987765443222110 00000
Q ss_pred cCCcc---------c----cccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe--ecccce
Q 004456 237 YNSVR---------E----GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRF 301 (752)
Q Consensus 237 ~~~~~---------~----~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~ 301 (752)
..... . .+..+.+++|++. ... .......++.++. .++..+.+. ......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-----------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ-DPA-----------TADLLYGYLSVDL---KTGKTHTQEFADLTELY 257 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC--------C-----------CCEEEEEEEEEET---TTCCEEEEEEEECSSCE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcC-Ccc-----------ccccceeEEEEec---cCCcEEecccccCCCcc
Confidence 00000 0 0112333333321 000 0001113333565 444444432 233456
Q ss_pred eeeeeec-CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceE
Q 004456 302 RSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (752)
Q Consensus 302 ~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~ 380 (752)
..++||| ||+.++.. ...|+++|+.++ +......... ..-.++|||||++|+....
T Consensus 258 ~~~~~sp~dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~~-------- 314 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV------LNRLAKYDLKQR--KLIKAANLDH-------TYYCVAFDKKGDKLYLGGT-------- 314 (349)
T ss_dssp EEEEECSSCTTEEEEE------ESEEEEEETTTT--EEEEEEECSS-------CCCEEEECSSSSCEEEESB--------
T ss_pred eeeEecCCCCCEEEEE------cCeEEEEECccC--eEEEEEcCCC-------CccceEECCCCCEEEEecC--------
Confidence 7788999 99988776 236999999874 2222221110 1112679999999887531
Q ss_pred EEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
...|.+||+++++....
T Consensus 315 -------------~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 315 -------------FNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp -------------SSEEEEEETTTTEEEEE
T ss_pred -------------CCeEEEEeccccceeee
Confidence 12599999988875433
No 302
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.47 E-value=1.5e-11 Score=125.89 Aligned_cols=224 Identities=13% Similarity=0.103 Sum_probs=138.2
Q ss_pred cEEEEEcc-CCCc-cccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCC
Q 004456 157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAED 232 (752)
Q Consensus 157 ~~i~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~ 232 (752)
+.|.++++ +|+. ..+..+ ..+..++|+|||+.|+..+.+. .+.+||+.+++... +....
T Consensus 45 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-------------~i~vwd~~~~~~~~~~~~~~---- 107 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK-------------TLKIWDVSSGKCLKTLKGHS---- 107 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------------EEEEEETTTCCEEEEEECCS----
T ss_pred CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCC-------------EEEEEECCCCcEEEEEcCCC----
Confidence 46788888 6643 334444 7788999999999998876653 79999998765433 32221
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCce
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA 312 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~ 312 (752)
..+..+.|+|+|+. |+..+ ..+.+.+||+. .+.....+......+..++|+|+++.
T Consensus 108 ---------~~v~~~~~~~~~~~-l~s~~------------~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 108 ---------NYVFCCNFNPQSNL-IVSGS------------FDESVRIWDVK--TGKCLKTLPAHSDPVSAVHFNRDGSL 163 (312)
T ss_dssp ---------SCEEEEEECSSSSE-EEEEE------------TTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred ---------CCEEEEEEcCCCCE-EEEEe------------CCCcEEEEECC--CCEEEEEecCCCCcEEEEEEcCCCCE
Confidence 22667899999996 55443 33478888883 22233445555667889999999998
Q ss_pred EEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCC
Q 004456 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEG 392 (752)
Q Consensus 313 l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (752)
|+.+. ....|.++++.++. ....+...... ..-.++|+|+|++|+....+
T Consensus 164 l~~~~----~d~~i~~wd~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~d------------------- 213 (312)
T 4ery_A 164 IVSSS----YDGLCRIWDTASGQ-CLKTLIDDDNP------PVSFVKFSPNGKYILAATLD------------------- 213 (312)
T ss_dssp EEEEE----TTSCEEEEETTTCC-EEEEECCSSCC------CEEEEEECTTSSEEEEEETT-------------------
T ss_pred EEEEe----CCCcEEEEECCCCc-eeeEEeccCCC------ceEEEEECCCCCEEEEEcCC-------------------
Confidence 88776 23358888887641 11122111110 11126799999999887632
Q ss_pred CCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 393 NIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 393 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
..|.+||+.+++.......... .... ....+++++..++++.. ....|++||+.+++..
T Consensus 214 --~~i~iwd~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~l~sg~---~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 214 --NTLKLWDYSKGKCLKTYTGHKN----EKYC-----IFANFSVTGGKWIVSGS---EDNLVYIWNLQTKEIV 272 (312)
T ss_dssp --TEEEEEETTTTEEEEEECSSCC----SSSC-----CCEEEECSSSCEEEECC---TTSCEEEEETTTCCEE
T ss_pred --CeEEEEECCCCcEEEEEEecCC----ceEE-----EEEEEEeCCCcEEEEEC---CCCEEEEEECCCchhh
Confidence 1589999988876554433211 0000 11234444444444332 2346899998876644
No 303
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.47 E-value=4.5e-12 Score=131.80 Aligned_cols=223 Identities=13% Similarity=0.101 Sum_probs=131.2
Q ss_pred ceeEEeecCCCCCCCCce--eecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 5 TGIGIHRLLPDDSLGPEK--EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
..|.++++.. +... ..........+...+|||||++||..+. ...+.+++...+....+.....
T Consensus 38 ~~i~iw~~~~----~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~----------D~~v~iw~~~~~~~~~~~~~~~ 103 (345)
T 3fm0_A 38 RRIRIWGTEG----DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF----------DATTCIWKKNQDDFECVTTLEG 103 (345)
T ss_dssp SCEEEEEEET----TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET----------TSCEEEEEECCC-EEEEEEECC
T ss_pred CeEEEEEcCC----CcceeeeeeccccCCcEEEEEECCCCCEEEEEEC----------CCcEEEEEccCCCeEEEEEccC
Confidence 4577777765 4322 1111112235888999999999998643 3556666666654322211111
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
+ ...+..++|+|||+.|+..+.+ +.|+++
T Consensus 104 h--~~~v~~v~~sp~~~~l~s~s~D-------------------------------------------------~~v~iw 132 (345)
T 3fm0_A 104 H--ENEVKSVAWAPSGNLLATCSRD-------------------------------------------------KSVWVW 132 (345)
T ss_dssp C--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEE
T ss_pred C--CCCceEEEEeCCCCEEEEEECC-------------------------------------------------CeEEEE
Confidence 1 1146788999999988876431 467777
Q ss_pred cc-CCC-c---cccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcc
Q 004456 163 SL-DGT-A---KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (752)
Q Consensus 163 ~~-~G~-~---~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 236 (752)
++ ++. . ..+..+ ..+..+.|+|||+.|+..+.+. .+.+|+...++...+....
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-------------~i~~w~~~~~~~~~~~~~~-------- 191 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD-------------TVKLYREEEDDWVCCATLE-------- 191 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS-------------CEEEEEEETTEEEEEEEEC--------
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC-------------cEEEEEecCCCEEEEEEec--------
Confidence 77 332 1 223334 6788999999999998877663 7889988766433221111
Q ss_pred cCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-----------CeEEee----cccce
Q 004456 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-----------PEILHK----LDLRF 301 (752)
Q Consensus 237 ~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~l~~----~~~~~ 301 (752)
.....+..++|+|||+. |+..+ ..+.|.+|+... .+.. ...+.. ....+
T Consensus 192 --~h~~~v~~l~~sp~g~~-l~s~s------------~D~~v~iW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 255 (345)
T 3fm0_A 192 --GHESTVWSLAFDPSGQR-LASCS------------DDRTVRIWRQYL-PGNEQGVACSGSDPSWKCICTLSGFHSRTI 255 (345)
T ss_dssp --CCSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEEEEC-TTCTTCCCCC---CEEEEEEEECSSCSSCE
T ss_pred --CCCCceEEEEECCCCCE-EEEEe------------CCCeEEEecccc-CCCCccceeeccCCccceeEEecCCCCCcE
Confidence 11123778999999996 55553 223455555310 0100 011111 23457
Q ss_pred eeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 302 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
..++|+|++..|+.+..+ ...++|..+.
T Consensus 256 ~~v~~~~~~~~l~s~~~d--~~i~vw~~~~ 283 (345)
T 3fm0_A 256 YDIAWCQLTGALATACGD--DAIRVFQEDP 283 (345)
T ss_dssp EEEEECTTTCCEEEEETT--SCEEEEEECT
T ss_pred EEEEEecCCCEEEEEeCC--CeEEEEEeCC
Confidence 889999999998887632 2334555443
No 304
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.47 E-value=1.7e-12 Score=129.53 Aligned_cols=217 Identities=14% Similarity=0.144 Sum_probs=129.3
Q ss_pred cEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCC--------C
Q 004456 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------I 564 (752)
Q Consensus 493 ~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------~ 564 (752)
..+.+.+++|.+. +++.|+||.+||+. +. ..+||+++..+. .
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~----------------~~----------~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGS----------------LP----------APAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCS----------------SC----------CCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCc----------------cc----------cCCCeEEEEecccccccccCC
Confidence 3688999999763 35799999999841 10 357999988432 1
Q ss_pred CCCCCCCCC------CCchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 565 PIIGEGDKL------PNDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 565 ~~~g~g~~~------~~~~~~~~~~~d~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
+.+|+|.-. .....+....-++.++++||.++. .||++||+|+|||+||.+|+++++.. ++|+++|..++.
T Consensus 140 gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g 218 (375)
T 3pic_A 140 GSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESG 218 (375)
T ss_dssp GGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCC
T ss_pred CCccceecccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCC
Confidence 122332110 001112233468999999999998 89999999999999999999999998 589999998864
Q ss_pred CCCCCC--------ccCcccc------ccchhhhHHHHHhc------Chhh---hcCCC-CCCEEEEEeCCCCCCCCCHH
Q 004456 637 YNKTLT--------PFGFQTE------FRTLWEATNVYIEM------SPIT---HANKI-KKPILIIHGEVDDKVGLFPM 692 (752)
Q Consensus 637 ~~~~~~--------~~~~~~~------~~~~~~~~~~~~~~------~~~~---~~~~~-~~P~li~~G~~D~~v~~~~~ 692 (752)
.+-... ..+.... ....|..+. +..+ -|+. -++-+ ..|+|++.| .|..++ +.
T Consensus 219 ~~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~~-~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~~ 294 (375)
T 3pic_A 219 AGGSACWRISDYLKSQGANIQTASEIIGEDPWFSTT-FNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--PQ 294 (375)
T ss_dssp TTTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCGG-GGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--HH
T ss_pred CCchhhhhhhhhhcccCccccccccccCcccccccc-hhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--cH
Confidence 321100 0000000 001111110 1110 0111 11222 478999999 888877 66
Q ss_pred HHHHHHHH----HHhCC--CcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCCCCC
Q 004456 693 QAERFFDA----LKGHG--ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDG 748 (752)
Q Consensus 693 ~~~~~~~~----l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 748 (752)
.....+.+ ++..| .++.+.+..+.+|+....+ ....+.+||+++|.+.+.++
T Consensus 295 g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~~----~~~~~~~F~~k~L~~~~~~t 352 (375)
T 3pic_A 295 SCFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPSN----QQSQLTAFVQKFLLGQSTNT 352 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCGG----GHHHHHHHHHHHTSCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCccccCCHH----HHHHHHHHHHHHhCCCCCCC
Confidence 44333332 23344 4577765444466433222 34678999999998865443
No 305
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.47 E-value=1.5e-11 Score=128.21 Aligned_cols=246 Identities=9% Similarity=0.043 Sum_probs=150.2
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-------eec
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-------KPL 77 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-------~~l 77 (752)
..|.++++.. ++.......+. ..+...+|||||+.||... ....+.++++..+.. +.+
T Consensus 86 g~v~vWd~~~----~~~~~~~~~~~-~~v~~~~~sp~g~~lasg~----------~d~~i~v~~~~~~~~~~~~~~~~~~ 150 (354)
T 2pbi_B 86 GKVIVWDSFT----TNKEHAVTMPC-TWVMACAYAPSGCAIACGG----------LDNKCSVYPLTFDKNENMAAKKKSV 150 (354)
T ss_dssp SEEEEEETTT----CCEEEEEECSS-SCCCEEEECTTSSEEEEES----------TTSEEEEEECCCCTTCCSGGGCEEE
T ss_pred CeEEEEECCC----CCcceEEecCC-CCEEEEEECCCCCEEEEee----------CCCCEEEEEEeccccccccccceee
Confidence 4566777655 44333222222 2578899999999999863 335666766654321 122
Q ss_pred cCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhccc
Q 004456 78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (752)
Q Consensus 78 t~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (752)
..+.. .+..+.|+|+++.|+..+.+ +
T Consensus 151 ~~h~~-----~v~~~~~~~~~~~l~t~s~D-------------------------------------------------~ 176 (354)
T 2pbi_B 151 AMHTN-----YLSACSFTNSDMQILTASGD-------------------------------------------------G 176 (354)
T ss_dssp EECSS-----CEEEEEECSSSSEEEEEETT-------------------------------------------------S
T ss_pred eccCC-----cEEEEEEeCCCCEEEEEeCC-------------------------------------------------C
Confidence 11111 35688999999988866321 5
Q ss_pred EEEEEcc-CCCc-cccCCc-cceeccccCC--CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC
Q 004456 158 QLVLGSL-DGTA-KDFGTP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (752)
Q Consensus 158 ~i~~~~~-~G~~-~~l~~~-~~~~~~~~Sp--DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (752)
.|.+||+ +|+. ..+..+ ..+..+.|+| +|+.|+..+.+. .+.+||+.+++........
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-------------~v~~wd~~~~~~~~~~~~h---- 239 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK-------------KAMVWDMRSGQCVQAFETH---- 239 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS-------------CEEEEETTTCCEEEEECCC----
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC-------------eEEEEECCCCcEEEEecCC----
Confidence 7889998 6643 344434 5666677766 678887776553 7999999877544322211
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec---ccceeeeeeecC
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDD 309 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~---~~~~~~~~~spD 309 (752)
...+..++|+|+|+. |+..+ ..+.+.+||+ .......+... ...+..++|+||
T Consensus 240 --------~~~v~~v~~~p~~~~-l~s~s------------~D~~v~lwd~---~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 240 --------ESDVNSVRYYPSGDA-FASGS------------DDATCRLYDL---RADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp --------SSCEEEEEECTTSSE-EEEEE------------TTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred --------CCCeEEEEEeCCCCE-EEEEe------------CCCeEEEEEC---CCCcEEEEEcCCCcccceeEEEEeCC
Confidence 123678999999986 55443 3346888887 32222222221 124677899999
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
|+.|+.+. ....|.++++..+ ........... ..-.++|||||++|+..+.
T Consensus 296 g~~l~~g~----~d~~i~vwd~~~~--~~~~~l~~h~~------~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 296 GRLLFAGY----NDYTINVWDVLKG--SRVSILFGHEN------RVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp SSEEEEEE----TTSCEEEEETTTC--SEEEEECCCSS------CEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEE----CCCcEEEEECCCC--ceEEEEECCCC------cEEEEEECCCCCEEEEEcC
Confidence 99888876 3335888888664 22221111111 1112679999999988873
No 306
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.47 E-value=3.8e-13 Score=137.06 Aligned_cols=227 Identities=14% Similarity=0.110 Sum_probs=138.1
Q ss_pred CCceEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh----
Q 004456 479 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA---- 553 (752)
Q Consensus 479 ~~~~~~~~~~~~-~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 553 (752)
...++.+++.+. -+.....++|+|+++++. ..++|+|+++||.. .|.. .......+..
T Consensus 9 ~~~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~---------------~f~~-~~~~~~~l~~~~~~ 71 (331)
T 3gff_A 9 AVEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGED---------------QFDH-MASLLQFLSQGTMP 71 (331)
T ss_dssp --CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHH---------------HHHH-HHHHHHHHTCSSSC
T ss_pred CceEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChh---------------hhHH-HHHHHHHHHhhhhc
Confidence 345677777765 467899999999998653 24699999999941 1110 0012223332
Q ss_pred --CCcEEEecCCCC----CCC-------CCCCC---CC-chhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 004456 554 --RRFAVLAGPSIP----IIG-------EGDKL---PN-DRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHSYGAFM 615 (752)
Q Consensus 554 --~G~~v~~~~~~~----~~g-------~g~~~---~~-~~~~~~~~~d~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 615 (752)
..+.|+.++..+ ..- .|... .+ ........+.+ .+++.++.++..++..+ +|+||||||++
T Consensus 72 ~~~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~ 150 (331)
T 3gff_A 72 QIPKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLV 150 (331)
T ss_dssp SSCCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHH
T ss_pred CCCCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHH
Confidence 356777643310 000 01000 00 00011222222 24567777766566544 89999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCC-------CCC
Q 004456 616 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDD-------KVG 688 (752)
Q Consensus 616 a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~-------~v~ 688 (752)
|+.++.++|+.|+++++++|...+. .. ........ .+........|+++.||+.|. .++
T Consensus 151 al~~~~~~p~~F~~~~~~S~~~w~~-------~~--~~~~~~~~-----~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~ 216 (331)
T 3gff_A 151 AMEALRTDRPLFSAYLALDTSLWFD-------SP--HYLTLLEE-----RVVKGDFKQKQLFMAIANNPLSPGFGVSSYH 216 (331)
T ss_dssp HHHHHHTTCSSCSEEEEESCCTTTT-------TT--HHHHHHHH-----HHHHCCCSSEEEEEEECCCSEETTTEECCHH
T ss_pred HHHHHHhCchhhheeeEeCchhcCC-------hH--HHHHHHHH-----HhhcccCCCCeEEEEeCCCCCCCccchHHHH
Confidence 9999999999999999999953211 00 00011110 111112245799999999998 455
Q ss_pred CCHHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 689 LFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 689 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
...+++++++|+.. |.++++.++|+++|.... ...+...++||-.....
T Consensus 217 --~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 217 --KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp --HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGCC
T ss_pred --HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcCC
Confidence 77889999999886 678999999999997442 34455566666655543
No 307
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.47 E-value=6.6e-12 Score=133.67 Aligned_cols=248 Identities=11% Similarity=0.020 Sum_probs=155.0
Q ss_pred eeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcc--------eeccCCCCccccccccceEEecCCc-EE
Q 004456 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--------KPLFESPDICLNAVFGSFVWVNNST-LL 101 (752)
Q Consensus 32 ~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~--------~~lt~~~~~~~~~~~~~~~wspdg~-~l 101 (752)
.+...+|+| |++.||..+ ....|.++++.++.. ..+..+.. .+..+.|+|+++ .|
T Consensus 83 ~V~~~~~~p~~~~~l~s~s----------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~l 147 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGS----------EDCTVMVWEIPDGGLVLPLREPVITLEGHTK-----RVGIVAWHPTAQNVL 147 (402)
T ss_dssp CEEEEEECTTCTTEEEEEE----------TTSEEEEEECCTTCCSSCBCSCSEEEECCSS-----CEEEEEECSSBTTEE
T ss_pred CEEEEEeCCCCCCEEEEEe----------CCCeEEEEEccCCCCccccCCceEEecCCCC-----eEEEEEECcCCCCEE
Confidence 588999999 888888763 336788888887632 22322222 467889999995 55
Q ss_pred EEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-cccc--CCc-cc
Q 004456 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDF--GTP-AV 176 (752)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l--~~~-~~ 176 (752)
+..+. .+.|.++|+ +++ ...+ ..+ ..
T Consensus 148 ~s~~~-------------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 148 LSAGC-------------------------------------------------DNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp EEEET-------------------------------------------------TSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred EEEcC-------------------------------------------------CCEEEEEECCCCCccEEEecCCCCCc
Confidence 54321 157889998 663 3444 334 78
Q ss_pred eeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEec-CCCCCCCCCcccCCccccccceeeeeCCCc
Q 004456 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC-DLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (752)
Q Consensus 177 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~wspDG~~ 255 (752)
+..++|+|||+.|+..+.++ .|.+||+.+++..... ..... ..+..+.|+|||+.
T Consensus 179 v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 234 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDK-------------RVRVIEPRKGTVVAEKDRPHEG-----------TRPVHAVFVSEGKI 234 (402)
T ss_dssp EEEEEECTTSSCEEEEETTS-------------EEEEEETTTTEEEEEEECSSCS-----------SSCCEEEECSTTEE
T ss_pred eEEEEECCCCCEEEEEecCC-------------cEEEEeCCCCceeeeeccCCCC-----------CcceEEEEcCCCcE
Confidence 89999999999999887653 7999999877654332 22111 11457899999984
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
|+... . ....+.|.++|+. ....+..+. .....+..++|+||++.|+.....+ ..|.++++.+
T Consensus 235 -l~~g~-~--------~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d---g~i~i~d~~~ 299 (402)
T 2aq5_A 235 -LTTGF-S--------RMSERQVALWDTK--HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD---SSIRYFEITS 299 (402)
T ss_dssp -EEEEE-C--------TTCCEEEEEEETT--BCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---SCEEEEEECS
T ss_pred -EEEec-c--------CCCCceEEEEcCc--cccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---CeEEEEEecC
Confidence 43331 1 1134478999983 222223222 3445678899999999887765223 3477777766
Q ss_pred CCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 334 KDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
+......+....... ..-.++|+|||..++.... .+.+|++.+++.+.+
T Consensus 300 ~~~~~~~l~~~~~~~-----~v~~~~~sp~~~~~~s~~~-----------------------~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 300 EAPFLHYLSMFSSKE-----SQRGMGYMPKRGLEVNKCE-----------------------IARFYKLHERKCEPI 348 (402)
T ss_dssp STTCEEEEEEECCSS-----CCSEEEECCGGGSCGGGTE-----------------------EEEEEEEETTEEEEE
T ss_pred CCcceEeecccccCC-----cccceEEecccccceecce-----------------------eEEEEEcCCCcEEEE
Confidence 421122333222111 2223779999987653210 367778777776655
No 308
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.47 E-value=8.3e-12 Score=137.58 Aligned_cols=297 Identities=13% Similarity=0.072 Sum_probs=171.8
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecC----CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSP----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SP----DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
..|.++++.. .+++. +..++.+......+||| ||++|+... .....|.++|.++++..+....
T Consensus 200 ~~V~v~D~~~--~t~~~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~~---------~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 200 ARIDMIDLWA--KEPTK--VAEIKIGIEARSVESSKFKGYEDRYTIAGA---------YWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp SEEEEEETTS--SSCEE--EEEEECCSEEEEEEECCSTTCTTTEEEEEE---------EESSEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECcC--CCCcE--EEEEecCCCcceEEeCCCcCCCCCEEEEEE---------ccCCeEEEEeccccccceeecc
Confidence 4577777731 11332 22234455688899999 999987753 2247889999888876544322
Q ss_pred CCcc-----c--cccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhh
Q 004456 81 PDIC-----L--NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (752)
Q Consensus 81 ~~~~-----~--~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 153 (752)
.... + ...+..+.+|||+..+++...
T Consensus 267 ~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~----------------------------------------------- 299 (543)
T 1nir_A 267 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK----------------------------------------------- 299 (543)
T ss_dssp CEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------------------------------------
T ss_pred cCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------------------------------------
Confidence 1100 0 012456789999887776532
Q ss_pred hcccEEEEEcc-CCCcc---ccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC
Q 004456 154 YTTAQLVLGSL-DGTAK---DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (752)
Q Consensus 154 ~~~~~i~~~~~-~G~~~---~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (752)
..+.|+++++ +++.. .+........+.|||||++|+...... +.|.+||+.+++.........
T Consensus 300 -~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 300 -ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp -TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECSS
T ss_pred -CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccCC
Confidence 1168999998 44322 222225567899999999998776543 478999999886654332210
Q ss_pred CCCCCcccCCcccccccee-eeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC-----CCCCeEEeecccceee
Q 004456 230 AEDIPVCYNSVREGMRSIS-WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-----GEKPEILHKLDLRFRS 303 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~-wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~l~~~~~~~~~ 303 (752)
.|. . -+... ++||+.. ++.+... ..+.|.++++++.. ....+.+.........
T Consensus 367 ---~ph------~-g~g~~~~~p~~g~-~~~s~~~----------~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~ 425 (543)
T 1nir_A 367 ---TPH------P-GRGANFVHPKYGP-VWSTSHL----------GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF 425 (543)
T ss_dssp ---SBC------C-TTCEEEEETTTEE-EEEEEBS----------SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCC
T ss_pred ---CCC------C-CCCcccCCCCCcc-EEEeccC----------CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceE
Confidence 110 0 12233 4788665 5555321 23478888884210 1222334433344567
Q ss_pred eeeecCCceEEEeeeccc---CceeEEEEcCCCCCccceec--ccccc-ccccCCCCCCceeeCCCCCeEEEeeeecCCc
Q 004456 304 VSWCDDSLALVNETWYKT---SQTRTWLVCPGSKDVAPRVL--FDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 377 (752)
Q Consensus 304 ~~~spDg~~l~~~~~~~~---~~~~l~~~~~~~~~~~~~~l--~~~~~-~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~ 377 (752)
+++||||+.|+....... ....|.++|+++.+.....+ .+... .... ...-.+.++|||++|+++...+
T Consensus 426 v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~g~~~~~s~~~~--- 500 (543)
T 1nir_A 426 IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA--KRVVQPEYNKRGDEVWFSVWNG--- 500 (543)
T ss_dssp EECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC--CEEEEEEECSSSSEEEEEEECC---
T ss_pred EEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC--CceEeccCCCCCCEEEEEeecC---
Confidence 889999999888652121 13469999998863221222 11000 0000 0011255899999999885210
Q ss_pred ceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeec
Q 004456 378 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 378 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
......|.+||.+|+++++....
T Consensus 501 -------------~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 501 -------------KNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp -------------TTSCCEEEEEETTTTEEEEEECC
T ss_pred -------------CCCCCeEEEEECCCceEEEeecC
Confidence 11233699999999988766543
No 309
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3.2e-11 Score=123.08 Aligned_cols=273 Identities=12% Similarity=0.042 Sum_probs=168.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+....| |||++||..+ ..+.|.++++++++.......... .+..+.|+||++.|+..+.+
T Consensus 20 ~v~~~~~-~~~~~l~s~~----------~dg~v~vw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d---- 80 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVS----------RDGTVRLWSKDDQWLGTVVYTGQG----FLNSVCYDSEKELLLFGGKD---- 80 (313)
T ss_dssp CEEEEEE-EETTEEEEEE----------TTSEEEEEEESSSEEEEEEEECSS----CEEEEEEETTTTEEEEEETT----
T ss_pred CcEEEEe-cCCCEEEEEE----------cCCcEEEEECCCCEEEEEeecCCc----cEEEEEECCCCCEEEEecCC----
Confidence 5888899 9999998763 346888899888775444332221 46788999999998876431
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC---C-ccccCCc-cceeccccCCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T-AKDFGTP-AVYTAVEPSPD 185 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G---~-~~~l~~~-~~~~~~~~SpD 185 (752)
+.|.++++ +. + ...+..+ ..+..+.| +
T Consensus 81 ---------------------------------------------g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 81 ---------------------------------------------TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp ---------------------------------------------SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred ---------------------------------------------CeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 45666666 32 1 2333333 66777777 6
Q ss_pred CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeee-CCCceEEEEEecc
Q 004456 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (752)
Q Consensus 186 Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~ 264 (752)
++.|+....+. .+.+|| .......+..... .+..+.|+| +++. ++...
T Consensus 114 ~~~l~~~~~d~-------------~i~~~d-~~~~~~~~~~~~~-------------~v~~~~~~~~~~~~-l~~~~--- 162 (313)
T 3odt_A 114 DGVVISGSWDK-------------TAKVWK-EGSLVYNLQAHNA-------------SVWDAKVVSFSENK-FLTAS--- 162 (313)
T ss_dssp TTEEEEEETTS-------------EEEEEE-TTEEEEEEECCSS-------------CEEEEEEEETTTTE-EEEEE---
T ss_pred CCEEEEEeCCC-------------CEEEEc-CCcEEEecccCCC-------------ceeEEEEccCCCCE-EEEEE---
Confidence 78887776553 789999 3333334333322 256789988 7775 55443
Q ss_pred CCCCccccCccceEEeccCCCCCCCCCeEEee-cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccc
Q 004456 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (752)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 343 (752)
..+.+.++|. . .....+.. ....+..++|+|+++ ++... ....|.++++.++ +......
T Consensus 163 ---------~d~~i~i~d~---~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 163 ---------ADKTIKLWQN---D-KVIKTFSGIHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp ---------TTSCEEEEET---T-EEEEEECSSCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTC--CEEEEEE
T ss_pred ---------CCCCEEEEec---C-ceEEEEeccCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCch--hhhhhhh
Confidence 3346788875 1 22333333 566788999999999 66554 3346888898774 2222222
Q ss_pred cccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhcee
Q 004456 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (752)
Q Consensus 344 ~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (752)
.... ....++|+|+|+ |+....+ ..|.+||+.+++.......... .+.
T Consensus 223 ~~~~------~i~~~~~~~~~~-l~~~~~d---------------------g~v~iwd~~~~~~~~~~~~~~~----~i~ 270 (313)
T 3odt_A 223 GHES------FVYCIKLLPNGD-IVSCGED---------------------RTVRIWSKENGSLKQVITLPAI----SIW 270 (313)
T ss_dssp CCSS------CEEEEEECTTSC-EEEEETT---------------------SEEEEECTTTCCEEEEEECSSS----CEE
T ss_pred cCCc------eEEEEEEecCCC-EEEEecC---------------------CEEEEEECCCCceeEEEeccCc----eEE
Confidence 1111 111367999994 5554421 2599999998876555443321 122
Q ss_pred eeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 424 ~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
.++|+||++.+ . ... ...|++|++.+++..
T Consensus 271 -------~~~~~~~~~~~-~-~~~---dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 271 -------SVDCMSNGDII-V-GSS---DNLVRIFSQEKSRWA 300 (313)
T ss_dssp -------EEEECTTSCEE-E-EET---TSCEEEEESCGGGCC
T ss_pred -------EEEEccCCCEE-E-EeC---CCcEEEEeCCCCcee
Confidence 24899999833 3 222 346899998776544
No 310
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.46 E-value=2.8e-11 Score=129.60 Aligned_cols=283 Identities=13% Similarity=0.142 Sum_probs=173.2
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
..+-..||+++ .||.. .+..|+|+++++|+..++...... ...|..++|||||++|+..+.+
T Consensus 107 y~~~l~wS~~n-~lAvg-----------ld~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~D---- 168 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVA-----------LDNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSS---- 168 (420)
T ss_dssp TCBCEEECTTS-EEEEE-----------ETTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETT----
T ss_pred cceeEEECCCC-EEEEE-----------eCCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEECC----
Confidence 34568999875 67763 237899999999987765433221 1136789999999999876431
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 188 (752)
+.|.+|++ +++ .+.+..+ ..+..+ ++|++.
T Consensus 169 ---------------------------------------------g~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~ 201 (420)
T 4gga_A 169 ---------------------------------------------AEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYI 201 (420)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEE--EEETTE
T ss_pred ---------------------------------------------CeEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCE
Confidence 57888888 663 3444444 444444 456777
Q ss_pred EEEEecccCccccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~ 266 (752)
|+..+.+. .+.+|+...... ..+.... ..+..+.|+|+|+. ++...
T Consensus 202 l~sgs~d~-------------~i~~~d~~~~~~~~~~~~~h~-------------~~~~~~~~~~~g~~-l~s~~----- 249 (420)
T 4gga_A 202 LSSGSRSG-------------HIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRH-LASGG----- 249 (420)
T ss_dssp EEEEETTS-------------EEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE-----
T ss_pred EEEEeCCC-------------ceeEeeecccceeeEEecccc-------------cceeeeeecCCCCe-eeeee-----
Confidence 77665543 688888765432 2222222 22567899999996 55443
Q ss_pred CCccccCccceEEeccCCCCCCC--CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccc
Q 004456 267 DANVEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 344 (752)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 344 (752)
..+.+.+++....+.. ...........+..++|+|++..++.... .+....|.++|+.++ ........
T Consensus 250 -------~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~-gs~D~~I~iwd~~t~--~~~~~~~~ 319 (420)
T 4gga_A 250 -------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG-GTSDRHIRIWNVCSG--ACLSAVDA 319 (420)
T ss_dssp -------TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE-CTTTCEEEEEETTTT--EEEEEEEC
T ss_pred -------ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe-ecCCCEEEEEeCCcc--ccceeecc
Confidence 2336777776311111 12334455667888999999887776542 223456888898874 22222111
Q ss_pred ccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceee
Q 004456 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (752)
Q Consensus 345 ~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (752)
.. ..-...|+++++.|+..... ....|++||+.+++.......... .+..
T Consensus 320 ~~-------~v~~~~~~~~~~~lv~~sg~-------------------~d~~I~iwd~~~~~~v~~l~gH~~----~V~~ 369 (420)
T 4gga_A 320 HS-------QVCSILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RVLS 369 (420)
T ss_dssp SS-------CEEEEEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CEEE
T ss_pred cc-------ceeeeeecCCCCeEEEEEec-------------------CCCEEEEEECCCCcEEEEEcCCCC----CEEE
Confidence 11 11125699999999877511 122599999998876544333211 1333
Q ss_pred eecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 004456 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (752)
Q Consensus 425 ~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g 462 (752)
++|||||+.|+-... -..|.+||+...
T Consensus 370 -------l~~spdg~~l~S~s~----D~tvriWdv~~~ 396 (420)
T 4gga_A 370 -------LTMSPDGATVASAAA----DETLRLWRCFEL 396 (420)
T ss_dssp -------EEECTTSSCEEEEET----TTEEEEECCSCS
T ss_pred -------EEEcCCCCEEEEEec----CCeEEEEECCCC
Confidence 489999998765432 235888887543
No 311
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.46 E-value=4.2e-12 Score=132.44 Aligned_cols=218 Identities=8% Similarity=-0.020 Sum_probs=136.7
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCC---CCeEEEeeccccccccccCcceEEEEEcccCc--ceecc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPLF 78 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPD---G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~--~~~lt 78 (752)
...|.++++.. ++...+........+....|+|+ |++|+... ....|.++++.+++ .+.+.
T Consensus 43 d~~v~iw~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~ 108 (357)
T 3i2n_A 43 TGVIQLYEIQH----GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD----------FGGNLHIWNLEAPEMPVYSVK 108 (357)
T ss_dssp CEEEEEEEECS----SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE----------TTSCEEEECTTSCSSCSEEEC
T ss_pred CcEEEEEeCCC----CcccceeeecccCcEEEEEEcCCCCCCceEEEec----------CCCeEEEEeCCCCCccEEEEE
Confidence 35688888877 76655543233335889999999 68888853 34688999998776 33333
Q ss_pred CCCCccccccccce------EEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhh
Q 004456 79 ESPDICLNAVFGSF------VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFD 152 (752)
Q Consensus 79 ~~~~~~~~~~~~~~------~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 152 (752)
.+.. .+..+ .|+||++.|+..+.+
T Consensus 109 ~~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d--------------------------------------------- 138 (357)
T 3i2n_A 109 GHKE-----IINAIDGIGGLGIGEGAPEIVTGSRD--------------------------------------------- 138 (357)
T ss_dssp CCSS-----CEEEEEEESGGGCC-CCCEEEEEETT---------------------------------------------
T ss_pred eccc-----ceEEEeeccccccCCCccEEEEEeCC---------------------------------------------
Confidence 2222 24444 568999988876321
Q ss_pred hhcccEEEEEcc-CCC--ccccCCc-----cceeccc----cCCCCceEEEEecccCccccccccCccccEEEEecCCce
Q 004456 153 YYTTAQLVLGSL-DGT--AKDFGTP-----AVYTAVE----PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (752)
Q Consensus 153 ~~~~~~i~~~~~-~G~--~~~l~~~-----~~~~~~~----~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (752)
+.|.++++ +++ ...+... ..+..+. |+|||+.|+....+. .+.+||+.+.+
T Consensus 139 ----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~-------------~i~i~d~~~~~ 201 (357)
T 3i2n_A 139 ----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG-------------DIKLFDLRNMA 201 (357)
T ss_dssp ----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS-------------EEEEEETTTTE
T ss_pred ----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC-------------eEEEEECccCc
Confidence 56888888 443 3333222 1344444 999999999886653 79999999887
Q ss_pred eEEecCCCCCCCCCcccCCccccccceeeee---CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe--
Q 004456 221 VRELCDLPPAEDIPVCYNSVREGMRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-- 295 (752)
Q Consensus 221 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp---DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-- 295 (752)
......... .+..+.|+| +++. |+... ..+.+.++|+. .+.....+.
T Consensus 202 ~~~~~~~~~-------------~v~~~~~~~~~~~~~~-l~~~~------------~dg~i~i~d~~--~~~~~~~~~~~ 253 (357)
T 3i2n_A 202 LRWETNIKN-------------GVCSLEFDRKDISMNK-LVATS------------LEGKFHVFDMR--TQHPTKGFASV 253 (357)
T ss_dssp EEEEEECSS-------------CEEEEEESCSSSSCCE-EEEEE------------STTEEEEEEEE--EEETTTEEEEE
T ss_pred eeeecCCCC-------------ceEEEEcCCCCCCCCE-EEEEC------------CCCeEEEEeCc--CCCcccceeee
Confidence 655433322 267899999 8886 55543 34478888873 122223332
Q ss_pred ---ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 296 ---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 296 ---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
.....+..++|+|+++.++++...+ +.|.++++..
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~ 291 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGA---GGLHLWKYEY 291 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETT---SEEEEEEEEC
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCC---CcEEEeecCC
Confidence 4566788999999999544433222 2455666554
No 312
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.46 E-value=2.9e-12 Score=129.14 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=128.7
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCC--------CC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------IP 565 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------~~ 565 (752)
.+.+.+++|.+ ++|.|+||.+||+. . .+.+||+++..+. .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 46899999976 45799999999741 0 0457999988433 11
Q ss_pred CCCCCCCC------CCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004456 566 IIGEGDKL------PNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (752)
Q Consensus 566 ~~g~g~~~------~~~~~~~~~~~d~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~ 635 (752)
.+|+|.-. .....+....-++.++++||.. +..||++||+++|||+||..|+.+++.. ++|+++|..++
T Consensus 173 srG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~s 251 (433)
T 4g4g_A 173 SRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQES 251 (433)
T ss_dssp GTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESC
T ss_pred cCCccccccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecC
Confidence 23332210 0011122335689999999999 8899999999999999999999999998 58999999886
Q ss_pred CCCCCCC--------ccCcccc------ccchhhhHH--HHHh---cChhhh---cCC-CCCCEEEEEeCCCCCCCCCHH
Q 004456 636 SYNKTLT--------PFGFQTE------FRTLWEATN--VYIE---MSPITH---ANK-IKKPILIIHGEVDDKVGLFPM 692 (752)
Q Consensus 636 ~~~~~~~--------~~~~~~~------~~~~~~~~~--~~~~---~~~~~~---~~~-~~~P~li~~G~~D~~v~~~~~ 692 (752)
..+-... ..+.... ....|-... .|.. .-|+.+ ++- ...|+|++.| .|..++ +.
T Consensus 252 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~--p~ 328 (433)
T 4g4g_A 252 GAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG--PV 328 (433)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--HH
T ss_pred CCCchhhhhhchhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--cH
Confidence 4331100 0000000 001111110 0100 001111 111 1478999999 887776 65
Q ss_pred HHHHHHHHH----H--hCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcCCCCCC
Q 004456 693 QAERFFDAL----K--GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDG 748 (752)
Q Consensus 693 ~~~~~~~~l----~--~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 748 (752)
.....+.++ + ....++.+.+.++.+|+....+ ....+.+||+++|.+.+.++
T Consensus 329 g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~----~r~~~~~F~~k~Lkg~~~~t 386 (433)
T 4g4g_A 329 STTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSS----QNQDLNSYINYFLLGQGSPS 386 (433)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGG----GHHHHHHHHHHHTTCCSCCC
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHH----HHHHHHHHHHHHhCCCCCCC
Confidence 433232222 2 2345677777656667643222 34678999999998765543
No 313
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.45 E-value=5.4e-12 Score=132.06 Aligned_cols=289 Identities=10% Similarity=0.073 Sum_probs=168.1
Q ss_pred eeceeEecCC---CCeEEEeeccccccccccCcceEEEEEcccCcc-eeccCCCCccccccccceEEecC----CcEEEE
Q 004456 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNN----STLLIF 103 (752)
Q Consensus 32 ~~~~~~~SPD---G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspd----g~~l~~ 103 (752)
.+...+|+|+ |..+++++. ....|.++++.+++. +.+...........+..+.|+|+ |+.|+.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~---------~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATV---------GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEE---------ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEecccCCCCceEEEEC---------CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 5888999985 665555543 224788888886654 33321111111124678899999 566766
Q ss_pred EecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceecc
Q 004456 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAV 180 (752)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~ 180 (752)
.+. .+.|.++++ +++ ...+..+ ..+..+
T Consensus 91 ~~~-------------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AGS-------------------------------------------------RGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EET-------------------------------------------------TCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ecC-------------------------------------------------CCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 532 157999998 564 3344434 788999
Q ss_pred ccCC-CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEE
Q 004456 181 EPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (752)
Q Consensus 181 ~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~ 259 (752)
.|+| |++.|+....+. .|.+||+.+++........ ......+..+.|+|||+. |+.
T Consensus 122 ~~~~~~~~~l~s~~~dg-------------~i~iwd~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~-l~~ 178 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDH-------------ALRLWNIQTDTLVAIFGGV---------EGHRDEVLSADYDLLGEK-IMS 178 (366)
T ss_dssp EECSSCTTEEEEEETTS-------------CEEEEETTTTEEEEEECST---------TSCSSCEEEEEECTTSSE-EEE
T ss_pred EECCCCCCEEEEEeCCC-------------eEEEEEeecCeEEEEeccc---------ccccCceeEEEECCCCCE-EEE
Confidence 9999 888888876553 7999999877654433110 011233778999999996 555
Q ss_pred EEeccCCCCccccCccceEEeccCCCCCCCCCe-EE----------------------------eecccceeeeeeecCC
Q 004456 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL----------------------------HKLDLRFRSVSWCDDS 310 (752)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l----------------------------~~~~~~~~~~~~spDg 310 (752)
.. ..+.|.++|+. .+... .+ ......+..++|+ +
T Consensus 179 ~~------------~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 179 CG------------MDHSLKLWRIN---SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EE------------TTSCEEEEESC---SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred ec------------CCCCEEEEECC---CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 43 23467777772 22111 00 0144557778888 6
Q ss_pred ceEEEeeecccCceeEEEEcCCCCCccc----------eeccccccccccCCCCCCceeeCCC--CCeEEEeeeecCCcc
Q 004456 311 LALVNETWYKTSQTRTWLVCPGSKDVAP----------RVLFDRVFENVYSDPGSPMMTRTST--GTNVIAKIKKENDEQ 378 (752)
Q Consensus 311 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------~~l~~~~~~~~~~~~~~p~~~~s~d--g~~l~~~~~~~~~~~ 378 (752)
+.|+... ....|.++++....... ..+....... ...-.++|+|| |++|+....+
T Consensus 242 ~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~~~l~~~~~d----- 308 (366)
T 3k26_A 242 DLILSKS----CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ----CDIWYMRFSMDFWQKMLALGNQV----- 308 (366)
T ss_dssp TEEEEEC----SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS----CCSSCCCCEECTTSSEEEEECTT-----
T ss_pred CEEEEEe----cCCEEEEEeCCCccccccccccCCcchheeccccccC----CcEEEEEEcCCCCCcEEEEEecC-----
Confidence 6666655 23357777766531100 0111111000 01223568888 9988877522
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCceeE----EeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEE
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKER----IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 454 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i 454 (752)
| .|.+||+.+++... ....... ......++|+||++.|+.... ...|
T Consensus 309 --------g--------~i~vwd~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~s~~~----dg~i 359 (366)
T 3k26_A 309 --------G--------KLYVWDLEVEDPHKAKCTTLTHHKC---------GAAIRQTSFSRDSSILIAVCD----DASI 359 (366)
T ss_dssp --------S--------CEEEEECCSSSGGGCEEEEECCTTC---------CSCEEEEEECTTSSEEEEEET----TSEE
T ss_pred --------C--------cEEEEECCCCCCccccceEEccccc---------CCceEEEEeCCCCCeEEEEeC----CCEE
Confidence 1 48999998875421 1111100 011123589999998876542 3458
Q ss_pred EEEECC
Q 004456 455 HILSWP 460 (752)
Q Consensus 455 ~~~d~~ 460 (752)
++||+.
T Consensus 360 ~iwd~~ 365 (366)
T 3k26_A 360 WRWDRL 365 (366)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 888864
No 314
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.17 E-value=7e-15 Score=149.85 Aligned_cols=199 Identities=12% Similarity=0.064 Sum_probs=120.6
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCc-------hhHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-------RFVEQLVSS 585 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-------~~~~~~~~d 585 (752)
.|+||++||.+.. ...|. .++..|+ +||.|++ .+.+|+|.+.... .......+|
T Consensus 25 ~p~vv~lHG~~~~-----------~~~~~----~~~~~l~-~g~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 3b12_A 25 GPALLLLHGFPQN-----------LHMWA----RVAPLLA-NEYTVVC---ADLRGYGGSSKPVGAPDHANYSFRAMASD 85 (304)
Confidence 5889999996421 11122 2344555 8999999 5667777764431 223344555
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc---------------------c
Q 004456 586 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---------------------F 644 (752)
Q Consensus 586 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~---------------------~ 644 (752)
+.++++.+ +.++++|+||||||.+++.++.++|++++++|++++........ .
T Consensus 86 l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3b12_A 86 QRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159 (304)
Confidence 65555554 23589999999999999999999999999999998754311000 0
Q ss_pred ----------Ccccc-ccc-------hh--hhHHHH-----------------Hhc---C----hhhhcCCCCCCEEEEE
Q 004456 645 ----------GFQTE-FRT-------LW--EATNVY-----------------IEM---S----PITHANKIKKPILIIH 680 (752)
Q Consensus 645 ----------~~~~~-~~~-------~~--~~~~~~-----------------~~~---~----~~~~~~~~~~P~li~~ 680 (752)
.+... ... .. .....+ ... . ....+.++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 239 (304)
T 3b12_A 160 PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS 239 (304)
Confidence 00000 000 00 000000 000 0 0001567889999999
Q ss_pred eCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 681 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 681 G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
|++|..++ +....+.+.+.+ ..++++++ ++||... .+.++.+.+.+.+||+++..+
T Consensus 240 G~~D~~~~-~~~~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~~~ 295 (304)
T 3b12_A 240 GSAGLMHS-LFEMQVVWAPRL----ANMRFASL-PGGHFFV-DRFPDDTARILREFLSDARSG 295 (304)
Confidence 99996553 033333333322 23577788 9999866 566788899999999887543
No 315
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.43 E-value=2.7e-11 Score=123.36 Aligned_cols=221 Identities=11% Similarity=0.059 Sum_probs=137.8
Q ss_pred cEEEEEcc-CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCC
Q 004456 157 AQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAED 232 (752)
Q Consensus 157 ~~i~~~~~-~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~ 232 (752)
+.|.+|++ ++ ....+..+ ..+....|+|||++|+..+.+. .|.+||+.+++.. .+....
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~-------------~i~vwd~~~~~~~~~~~~h~---- 97 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF-------------RIRVFNYNTGEKVVDFEAHP---- 97 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS-------------EEEEEETTTCCEEEEEECCS----
T ss_pred CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC-------------EEEEEECCCCcEEEEEeCCC----
Confidence 57888998 56 44445444 6788999999999998887663 7999999876543 333222
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCC-CC-eEEeecccceeeeeeec-C
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KP-EILHKLDLRFRSVSWCD-D 309 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~l~~~~~~~~~~~~sp-D 309 (752)
..+..++|+|+++. |+..+ ..+.+.+||+ ..+ .. +.+......+..++|+| |
T Consensus 98 ---------~~v~~~~~~~~~~~-l~sgs------------~D~~v~lWd~---~~~~~~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 98 ---------DYIRSIAVHPTKPY-VLSGS------------DDLTVKLWNW---ENNWALEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp ---------SCEEEEEECSSSSE-EEEEE------------TTSCEEEEEG---GGTTEEEEEECCCCSCEEEEEECTTC
T ss_pred ---------CcEEEEEEcCCCCE-EEEEC------------CCCeEEEEEC---CCCcchhhhhcccCCcEEEEEECCCC
Confidence 23778999999996 54443 3346888887 322 22 22344556788999999 5
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeC--CCCCeEEEeeeecCCcceEEEEccCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT--STGTNVIAKIKKENDEQIYILLNGRG 387 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s--~dg~~l~~~~~~~~~~~~~~~~~~~g 387 (752)
++.|+.+. ....|.++++.... ....+...... ....+.|+ +++++|+..+.+
T Consensus 153 ~~~l~sgs----~D~~v~iwd~~~~~-~~~~~~~~~~~------~v~~~~~~~~~~~~~l~s~s~D-------------- 207 (304)
T 2ynn_A 153 PSTFASGC----LDRTVKVWSLGQST-PNFTLTTGQER------GVNYVDYYPLPDKPYMITASDD-------------- 207 (304)
T ss_dssp TTEEEEEE----TTSEEEEEETTCSS-CSEEEECCCTT------CEEEEEECCSTTCCEEEEEETT--------------
T ss_pred CCEEEEEe----CCCeEEEEECCCCC-ccceeccCCcC------cEEEEEEEEcCCCCEEEEEcCC--------------
Confidence 66676665 23357788876641 22222211111 11113455 477778776632
Q ss_pred CCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 388 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
..|.+||+.+++.......... .+. .+.|+|++..|+.... -..|.+||..+++..+
T Consensus 208 -------~~i~iWd~~~~~~~~~~~~h~~----~v~-------~~~~~p~~~~l~s~s~----Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 208 -------LTIKIWDYQTKSCVATLEGHMS----NVS-------FAVFHPTLPIIISGSE----DGTLKIWNSSTYKVEK 264 (304)
T ss_dssp -------SEEEEEETTTTEEEEEEECCSS----CEE-------EEEECSSSSEEEEEET----TSCEEEEETTTCCEEE
T ss_pred -------CeEEEEeCCCCccceeeCCCCC----CEE-------EEEECCCCCEEEEEcC----CCeEEEEECCCCceee
Confidence 1589999988876544433221 122 2478999997665432 2348899988776543
No 316
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.43 E-value=4.2e-11 Score=128.24 Aligned_cols=255 Identities=11% Similarity=0.083 Sum_probs=159.3
Q ss_pred ceeEEeecCCCCCCCCceeecCCC-CCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
..|+++++.. |+..++..+. .+..+...+|||||++||..+ ....|.++++++++..+.......
T Consensus 125 ~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs----------~Dg~v~iWd~~~~~~~~~~~~h~~ 190 (420)
T 4gga_A 125 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----------SSAEVQLWDVQQQKRLRNMTSHSA 190 (420)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEE----------CCCeEEEEEcCCCcEEEEEeCCCC
Confidence 5688999877 8776654333 233689999999999999863 346788889988875443322211
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+. .++++++.|+..+. ...++.++
T Consensus 191 ----~v~--~~s~~~~~l~sgs~-------------------------------------------------d~~i~~~d 215 (420)
T 4gga_A 191 ----RVG--SLSWNSYILSSGSR-------------------------------------------------SGHIHHHD 215 (420)
T ss_dssp ----CEE--EEEEETTEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred ----ceE--EEeeCCCEEEEEeC-------------------------------------------------CCceeEee
Confidence 123 45556777765432 14677777
Q ss_pred cCC---CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 164 LDG---TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 164 ~~G---~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
... ....+..+ ..+....|+|+|+.|+....++ .+.+|+...++...... .....
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-------------~v~i~~~~~~~~~~~~~--------~~~~~ 274 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPL--------QTFTQ 274 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCCSSCSCCS--------EEECC
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeeccc-------------cceEEeeccccccceee--------eeecc
Confidence 622 23334334 6778999999999998887664 78889887553211000 00011
Q ss_pred ccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeec
Q 004456 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~ 319 (752)
....+..++|+|++.. ++.+... .....|.+||+ .++...........+....|+|+++.++.++..
T Consensus 275 ~~~~V~~~~~~p~~~~-~la~~~g---------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSN-VLATGGG---------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp CSSCEEEEEECTTCTT-EEEEEEC---------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceeeeeeCCCccc-EEEEEee---------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEec
Confidence 1223668899999998 5444311 12347888998 444444444556677889999999999887632
Q ss_pred ccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 320 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 320 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
. .+.|+++++.++ +........... .-.++|||||++|+..+.
T Consensus 342 ~--d~~I~iwd~~~~--~~v~~l~gH~~~------V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 342 A--QNQLVIWKYPTM--AKVAELKGHTSR------VLSLTMSPDGATVASAAA 384 (420)
T ss_dssp T--TCCEEEEETTTC--CEEEEECCCSSC------EEEEEECTTSSCEEEEET
T ss_pred C--CCEEEEEECCCC--cEEEEEcCCCCC------EEEEEEcCCCCEEEEEec
Confidence 2 235888888774 222222211111 112679999999987763
No 317
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.43 E-value=7.2e-14 Score=141.63 Aligned_cols=194 Identities=11% Similarity=0.114 Sum_probs=116.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC-CC--chhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL-PN--DRFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~-~~--~~~~~~~~~d~~~~ 589 (752)
.|+||++||.|... ....+......| .+||.|++ .+.+|+|.+. .. ........+|+.++
T Consensus 41 ~p~vv~lHG~G~~~-------------~~~~~~~~~~~L-~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 103 (292)
T 3l80_A 41 NPCFVFLSGAGFFS-------------TADNFANIIDKL-PDSIGILT---IDAPNSGYSPVSNQANVGLRDWVNAILMI 103 (292)
T ss_dssp SSEEEEECCSSSCC-------------HHHHTHHHHTTS-CTTSEEEE---ECCTTSTTSCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCc-------------HHHHHHHHHHHH-hhcCeEEE---EcCCCCCCCCCCCcccccHHHHHHHHHHH
Confidence 48999999742110 000111223333 37999999 5566777765 22 22345556665555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC----Cc---------cCcccc-------
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----TP---------FGFQTE------- 649 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~----~~---------~~~~~~------- 649 (752)
++.+ ..+++.|+||||||.+|+.++.++|++++++|+++|...... .. ......
T Consensus 104 l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (292)
T 3l80_A 104 FEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNY 177 (292)
T ss_dssp HHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHH
T ss_pred HHHh------CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhh
Confidence 5444 235899999999999999999999999999999995321000 00 000000
Q ss_pred ---ccchh----------h----hHHHHHhcCh---------------hhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHH
Q 004456 650 ---FRTLW----------E----ATNVYIEMSP---------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERF 697 (752)
Q Consensus 650 ---~~~~~----------~----~~~~~~~~~~---------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 697 (752)
....| . ....+....+ ...+.. ++|+|+++|++|..++ .. + .+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~ 252 (292)
T 3l80_A 178 LKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EY 252 (292)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TT
T ss_pred HhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HH
Confidence 00000 0 0001111121 112334 7999999999998876 44 3 33
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 698 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
. +.-...+ +++++++|... .+.++.+.+.+.+||+++
T Consensus 253 ~----~~~~~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 253 L----NKHTQTK-LILCGQHHYLH-WSETNSILEKVEQLLSNH 289 (292)
T ss_dssp C----CCCTTCE-EEECCSSSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred h----ccCCCce-eeeCCCCCcch-hhCHHHHHHHHHHHHHhc
Confidence 3 2223346 88999999765 566888999999999864
No 318
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=2.9e-11 Score=126.74 Aligned_cols=249 Identities=12% Similarity=0.106 Sum_probs=122.5
Q ss_pred EEEEcc--CCCccccCC---ccceeccccCCCCceE-EEEecccCccccccccC----ccccEEEEecC--CceeEEecC
Q 004456 159 LVLGSL--DGTAKDFGT---PAVYTAVEPSPDQKYV-LITSMHRPYSYKVPCAR----FSQKVQVWTTD--GKLVRELCD 226 (752)
Q Consensus 159 i~~~~~--~G~~~~l~~---~~~~~~~~~SpDGk~l-~~~~~~~~~~~~~~~~~----~~~~l~~~d~~--~~~~~~l~~ 226 (752)
|.++++ +|+..++.. .+....++|||||++| ++....... .. ... ..+.+.+|+++ ++....+..
T Consensus 62 v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~--~~-~~~~~~~~~g~v~v~~~~~~g~~~~~~~~ 138 (365)
T 1jof_A 62 WSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPY--AV-YANPFYKFAGYGNVFSVSETGKLEKNVQN 138 (365)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTC--CE-EEEEESSSCCEEEEEEECTTCCEEEEEEE
T ss_pred EEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcc--ee-ccceeecCCceEEEEccCCCCcCcceEee
Confidence 444444 564433321 1334568999999974 344331000 00 000 12467778775 332222221
Q ss_pred CCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-----ccce
Q 004456 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRF 301 (752)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-----~~~~ 301 (752)
.... ....+..++|||||+. |+.... ..+.|+++++++ +++...+... ....
T Consensus 139 ~~~~---------~~~~~~~~~~spdG~~-l~~~~~-----------~~~~v~~~~~~~--~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 139 YEYQ---------ENTGIHGMVFDPTETY-LYSADL-----------TANKLWTHRKLA--SGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp EECC---------TTCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEEECT--TSCEEEEEEEECSSTTCCE
T ss_pred EEeC---------CCCcceEEEECCCCCE-EEEEcC-----------CCCEEEEEEECC--CCCEEEeeeEecCCCCCCC
Confidence 1000 0122567899999997 655531 234788888721 3444333211 3456
Q ss_pred eeeeeecCCceEEEeeecccCceeEEEEcCCCCCccc--eeccccccccccCCC-------CCCcee-eCCCCCeEEEee
Q 004456 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP--RVLFDRVFENVYSDP-------GSPMMT-RTSTGTNVIAKI 371 (752)
Q Consensus 302 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~--~~l~~~~~~~~~~~~-------~~p~~~-~s~dg~~l~~~~ 371 (752)
..++|||||+.+++... ....-.+|.++..++.... ..+........ ... ..-.++ |||||++|+...
T Consensus 196 ~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 196 RWVAMHPTGNYLYALME-AGNRICEYVIDPATHMPVYTHHSFPLIPPGIP-DRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEEESSCTTCC-CBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CEeEECCCCCEEEEEEC-CCCeEEEEEEeCCCCcEEEccceEEcCCCCcC-CcccccccccccccEEEECCCCCEEEEEC
Confidence 78899999998877653 2234456666665431110 11111100000 000 011267 999999987665
Q ss_pred eecCCcceEEEEccCCCCCCCCCCeeEEEecC-CCceeEEee-ccchhhhhceeeeecCCcceeccc---CCCEEEEEEe
Q 004456 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWE-SNREKYFETAVALVFGQGEEDINL---NQLKILTSKE 446 (752)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~s~---d~~~l~~~~~ 446 (752)
... + ......|.+|+++ +|+.+.+.. ... .......++||| ||++|++...
T Consensus 274 ~~~------------~---~~~~~~i~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 274 RAN------------K---FELQGYIAGFKLRDCGSIEKQLFLSPT---------PTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp EES------------S---TTSCCEEEEEEECTTSCEEEEEEEEEC---------SSCCTTCCCEEECTTCTTEEEEECS
T ss_pred CCC------------C---CCCCCeEEEEEECCCCCEEEeeeeeec---------CCCCcccceecCCCcCCCEEEEEEc
Confidence 321 0 0011247777775 677665321 100 001123458899 8998876543
Q ss_pred cCCCCcEEEEEECCCC
Q 004456 447 SKTEITQYHILSWPLK 462 (752)
Q Consensus 447 ~~~~~~~i~~~d~~~g 462 (752)
. ...|.+++++..
T Consensus 330 ~---~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 Q---EGWLEIYRWKDE 342 (365)
T ss_dssp S---SCEEEEEEEETT
T ss_pred C---CCeEEEEEEchh
Confidence 2 234656655444
No 319
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.41 E-value=2.5e-11 Score=127.41 Aligned_cols=218 Identities=14% Similarity=0.147 Sum_probs=132.5
Q ss_pred cceeEEeecCCCCCCCC---ceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 4 FTGIGIHRLLPDDSLGP---EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
...|.++++.. ++ ...+... ...+....|+|||++|+..+ ....|.++++++++..+....
T Consensus 29 d~~v~i~~~~~----~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 29 NHEVHIYEKSG----NKWVQVHELKEH--NGQVTGVDWAPDSNRIVTCG----------TDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp SSEEEEEEEET----TEEEEEEEEECC--SSCEEEEEEETTTTEEEEEE----------TTSCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEeCCC----CcEEeeeeecCC--CCcccEEEEeCCCCEEEEEc----------CCCeEEEEECCCCeeeeeEEe
Confidence 35678888876 63 3444422 23588999999999998864 235788888888763332211
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
... ...+..+.|+||++.|+..+.+ +.|.
T Consensus 93 ~~~--~~~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~v~ 121 (372)
T 1k8k_C 93 LRI--NRAARCVRWAPNEKKFAVGSGS-------------------------------------------------RVIS 121 (372)
T ss_dssp CCC--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SSEE
T ss_pred ecC--CCceeEEEECCCCCEEEEEeCC-------------------------------------------------CEEE
Confidence 111 1146788999999988876421 4566
Q ss_pred EEcc-CCC----cccc-CCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCC-----
Q 004456 161 LGSL-DGT----AKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP----- 228 (752)
Q Consensus 161 ~~~~-~G~----~~~l-~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~----- 228 (752)
++++ .++ ...+ ..+ ..+..+.|+|||+.|+....+. .+.+||+.......-....
T Consensus 122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------------~i~~~d~~~~~~~~~~~~~~~~~~ 188 (372)
T 1k8k_C 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-------------KCRIFSAYIKEVEERPAPTPWGSK 188 (372)
T ss_dssp EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-------------CEEEEECCCTTTSCCCCCBTTBSC
T ss_pred EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-------------CEEEEEcccccccccccccccccc
Confidence 6666 333 2233 222 6788999999999998876553 7899996421100000000
Q ss_pred CCC-CCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeee
Q 004456 229 PAE-DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (752)
Q Consensus 229 ~~~-~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 307 (752)
... .....+......+..+.|+|||+. |+... ..+.+.++|+. .+.....+......+..++|+
T Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~------------~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 189 MPFGELMFESSSSCGWVHGVCFSANGSR-VAWVS------------HDSTVCLADAD--KKMAVATLASETLPLLAVTFI 253 (372)
T ss_dssp CCTTCEEEECCCCSSCEEEEEECSSSSE-EEEEE------------TTTEEEEEEGG--GTTEEEEEECSSCCEEEEEEE
T ss_pred cchhhheEecCCCCCeEEEEEECCCCCE-EEEEe------------CCCEEEEEECC--CCceeEEEccCCCCeEEEEEe
Confidence 000 000011112233678999999986 55553 33478888883 223334455555678899999
Q ss_pred cCCceEEEe
Q 004456 308 DDSLALVNE 316 (752)
Q Consensus 308 pDg~~l~~~ 316 (752)
||++.|+.+
T Consensus 254 ~~~~~l~~~ 262 (372)
T 1k8k_C 254 TESSLVAAG 262 (372)
T ss_dssp ETTEEEEEE
T ss_pred cCCCEEEEE
Confidence 999977665
No 320
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.41 E-value=1.1e-12 Score=131.94 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=98.6
Q ss_pred CCCCCCcEEEEEeChHHHHHHHHHHhCCCcee-EEEEccCCCCCCCCc-cCccc-----cccchhhhHHHHHhcChhhhc
Q 004456 597 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC-CGIARSGSYNKTLTP-FGFQT-----EFRTLWEATNVYIEMSPITHA 669 (752)
Q Consensus 597 ~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~-~~v~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 669 (752)
..+|++||+|+|+|+||+|++.+++.+|+.|+ +++++++........ ..... .....+.........+++..+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 45889999999999999999999999999998 877776532100000 00000 000011111111111344434
Q ss_pred CCC-CCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCC--cEEEEEeCCCCccCCcccc------------------HHH
Q 004456 670 NKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA--LSRLVLLPFEHHVYAAREN------------------VMH 728 (752)
Q Consensus 670 ~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~------------------~~~ 728 (752)
.++ .+|+||+||++|.+|| +.++++++++|++.+. +++++.+++++|.+..... -..
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred HcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 443 3699999999999999 9999999999998873 7999999999998653322 135
Q ss_pred HHHHHHHHHHHHhcC
Q 004456 729 VIWETDRWLQKYCLS 743 (752)
Q Consensus 729 ~~~~~~~fl~~~l~~ 743 (752)
....|++||...+..
T Consensus 164 ~~~~i~~ff~g~~~~ 178 (318)
T 2d81_A 164 GAGAALKWIYGSLNA 178 (318)
T ss_dssp HHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHhccCCC
Confidence 667899999877643
No 321
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.40 E-value=1.4e-11 Score=126.20 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=119.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCCCCCCCC---chhHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEA 588 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~ 588 (752)
.|.||++||.+... ..| ..+...|++ .+|.|++ .+.+|+|.+... ........+|+.+
T Consensus 38 ~p~lvllHG~~~~~-----------~~w----~~~~~~L~~~~~~~via---~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHSA-----------LSW----AVFTAAIISRVQCRIVA---LDLRSHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCCG-----------GGG----HHHHHHHHTTBCCEEEE---ECCTTSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCccc-----------ccH----HHHHHHHhhcCCeEEEE---ecCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 47899999964211 111 134455655 3899999 667788877432 2346777888888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCCCC------------CCccCcccc-----
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYNKT------------LTPFGFQTE----- 649 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--~p~~~~~~v~~~~~~~~~------------~~~~~~~~~----- 649 (752)
.++.+... + .+++.|+||||||.+|+.+|.+ .|+ ++++|++++..... ..+..+...
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 88888532 1 1589999999999999999996 466 89999876531000 000000000
Q ss_pred ------c-cchhh----hHHHHHh-------------------cC--------------hhhhcCCCCCCEEEEEeCCCC
Q 004456 650 ------F-RTLWE----ATNVYIE-------------------MS--------------PITHANKIKKPILIIHGEVDD 685 (752)
Q Consensus 650 ------~-~~~~~----~~~~~~~-------------------~~--------------~~~~~~~~~~P~li~~G~~D~ 685 (752)
. ..... .+..... .. ....+.++++|+|+++|+.|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 0 00000 0000000 00 001122578999999999997
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHh
Q 004456 686 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 741 (752)
Q Consensus 686 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 741 (752)
..+ ... ...+. ...++++++++||... .+.++.+.+.+.+||.+.-
T Consensus 256 ~~~--~~~----~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 256 LDK--DLT----IGQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp CCH--HHH----HHHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHTT
T ss_pred ccc--HHH----HHhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhcc
Confidence 643 221 12221 2358999999999865 5667889999999997654
No 322
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.7e-11 Score=127.42 Aligned_cols=227 Identities=14% Similarity=0.094 Sum_probs=140.4
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcce---eccCCCCccccccccceEEecC--CcEEEEEec
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK---PLFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~---~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~ 106 (752)
.+...+|||||++||... ....|.+++++++..+ .+..+.. .+..+.|+|+ ++.|+..+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCS----------SDKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEE----------CCCcEEEEecCCCcceeeeEecCCCC-----cEEEEEeCCCCCCCEEEEecc
Confidence 488899999999999863 2356777777643322 2322222 4678899987 888876632
Q ss_pred CCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC---ccccCCc-cceeccc
Q 004456 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVE 181 (752)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~---~~~l~~~-~~~~~~~ 181 (752)
+ +.|.+|++ +++ ...+..+ ..+..++
T Consensus 78 d-------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 78 D-------------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp T-------------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred C-------------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 1 56888888 553 2333434 7889999
Q ss_pred cCCC--CceEEEEecccCccccccccCccccEEEEecCCcee---EEecCCCCCCCCCcccCCccccccceeeee-----
Q 004456 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAEDIPVCYNSVREGMRSISWRA----- 251 (752)
Q Consensus 182 ~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp----- 251 (752)
|+|+ |+.|+....+. .+.+||+..... ..+... ...+..+.|+|
T Consensus 109 ~~~~~~~~~l~~~~~d~-------------~i~v~d~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSDG-------------KVSVVEFKENGTTSPIIIDAH-------------AIGVNSASWAPATIEE 162 (379)
T ss_dssp ECCGGGCSEEEEEETTS-------------EEEEEECCTTSCCCEEEEECC-------------TTCEEEEEECCCC---
T ss_pred eCCCCCCCEEEEecCCC-------------cEEEEecCCCCceeeEEecCC-------------CCceEEEEEcCccccc
Confidence 9999 89988886663 799999876522 122211 12367899999
Q ss_pred --------CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCe----EEeecccceeeeeeecC---CceEEEe
Q 004456 252 --------DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILHKLDLRFRSVSWCDD---SLALVNE 316 (752)
Q Consensus 252 --------DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~l~~~~~~~~~~~~spD---g~~l~~~ 316 (752)
|++. |+... ..+.|.++|+. .+.... .+......+..++|+|| ++.|+..
T Consensus 163 ~~~~~~~~~~~~-l~~~~------------~dg~i~i~d~~--~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 163 DGEHNGTKESRK-FVTGG------------ADNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp -------CTTCE-EEEEE------------TTSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred cccccCCCCCCE-EEEEe------------CCCeEEEEEec--CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 6775 55443 33468888873 122221 22234567889999999 7877776
Q ss_pred eecccCceeEEEEcCCCCCcc-ceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 317 TWYKTSQTRTWLVCPGSKDVA-PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 317 ~~~~~~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
. ....|.++++.++... ...+....... ...-.++|+|||++|+...
T Consensus 228 ~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 228 S----QDRTCIIWTQDNEQGPWKKTLLKEEKFP----DVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp E----TTSCEEEEEESSTTSCCEEEESSSSCCS----SCEEEEEECSSSCCEEEEE
T ss_pred e----CCCEEEEEeCCCCCccceeeeeccccCC----CcEEEEEEcCCCCEEEEec
Confidence 5 2234666666653111 11221111000 0111367999999998876
No 323
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.39 E-value=2.7e-11 Score=130.81 Aligned_cols=145 Identities=8% Similarity=0.073 Sum_probs=85.4
Q ss_pred cEEEEEccC-C-Cccc--------cCCc-cceeccccCCCC-ceEEEEecccCccccccccCccccEEEEecCCcee---
Q 004456 157 AQLVLGSLD-G-TAKD--------FGTP-AVYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--- 221 (752)
Q Consensus 157 ~~i~~~~~~-G-~~~~--------l~~~-~~~~~~~~SpDG-k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--- 221 (752)
+.|.++++. + .... +..+ ..+..++|+||| +.|+..+.+. .|.+||+.+++.
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-------------~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 198 LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-------------TIRLCDMRASALCDR 264 (447)
T ss_dssp SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-------------CEEEEETTTCSSSCT
T ss_pred CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-------------eEEEEECcCCccccc
Confidence 567778874 3 2222 3333 678899999999 7777766553 799999987653
Q ss_pred --EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc
Q 004456 222 --RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL 299 (752)
Q Consensus 222 --~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 299 (752)
..+...... .....+......+..++|+|||+. |+... . +.+.+||+.. .+.....+.....
T Consensus 265 ~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~------------~-~~v~iwd~~~-~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 265 HSKLFEEPEDP-SNRSFFSEIISSISDVKFSHSGRY-MMTRD------------Y-LSVKVWDLNM-ENRPVETYQVHEY 328 (447)
T ss_dssp TCEEECCC------CCHHHHHTTCEEEEEECTTSSE-EEEEE------------S-SEEEEEETTC-CSSCSCCEESCGG
T ss_pred eeeEeccCCCc-cccccccccCceEEEEEECCCCCE-EEEee------------C-CeEEEEeCCC-Cccccceeecccc
Confidence 333222110 000000111124778999999997 55443 2 5788888831 1222333332221
Q ss_pred c---------------eeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 300 R---------------FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 300 ~---------------~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
. ...++|+|||+.|+.++ ..+.|+++++.++
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s----~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS----YNNFFRMFDRNTK 374 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC----STTEEEEEETTTC
T ss_pred ccccccccccccccccceEEEECCCCCEEEEec----cCCEEEEEEcCCC
Confidence 1 22389999999997765 3346888888774
No 324
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.2e-10 Score=120.16 Aligned_cols=180 Identities=15% Similarity=0.168 Sum_probs=110.0
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee---ccCCCCccccccccceEEecCCcEEEEEecCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~---lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~ 108 (752)
.+....|||+ .||.. .....|.++++.++..+. +....+ ...+..++|+||++.|+..+.+
T Consensus 16 ~v~~~~~s~~--~las~----------~~D~~i~lw~~~~~~~~~~~~~~~~~h---~~~v~~v~~sp~~~~las~s~D- 79 (330)
T 2hes_X 16 KIWSFDFSQG--ILATG----------STDRKIKLVSVKYDDFTLIDVLDETAH---KKAIRSVAWRPHTSLLAAGSFD- 79 (330)
T ss_dssp CEEEEEEETT--EEEEE----------ESSSCEEEEECSSSCCEEEEEECTTCC---CSCEEEEEECTTSSEEEEEETT-
T ss_pred ceeeeccCCC--EEEEE----------cCCCEEEEEEecCCCeEEEEEEecCCc---cCCEEEEEECCCCCEEEEEeCC-
Confidence 4778889998 66654 334678888887754322 211111 1146789999999988876431
Q ss_pred CCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC--------C-ccccCCc-ccee
Q 004456 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG--------T-AKDFGTP-AVYT 178 (752)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G--------~-~~~l~~~-~~~~ 178 (752)
+.|.++++.. + ...+..+ ..+.
T Consensus 80 ------------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 80 ------------------------------------------------STVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp ------------------------------------------------SCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred ------------------------------------------------CcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 3566666521 1 1223334 6788
Q ss_pred ccccCCCCceEEEEecccCccccccccCccccEEEEecC-Cce----eEEecCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 179 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
.++|||||++|+..+.+. .+.+||+. ++. ...+... ...+..+.|+|||
T Consensus 112 ~v~~sp~g~~las~s~D~-------------~v~iwd~~~~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~ 165 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDK-------------SVWIWETDESGEEYECISVLQEH-------------SQDVKHVIWHPSE 165 (330)
T ss_dssp EEEECTTSCEEEEEETTS-------------CEEEEECCTTCCCCEEEEEECCC-------------SSCEEEEEECSSS
T ss_pred EEEECCCCCEEEEEeCCC-------------EEEEEeccCCCCCeEEEEEeccC-------------CCceEEEEECCCC
Confidence 999999999998877664 79999984 221 1122222 1236789999999
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCCC---CeEEeecccceeeeeeecC--CceEEEee
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDD--SLALVNET 317 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~~~~~~~~~~spD--g~~l~~~~ 317 (752)
+. |+..+ ..+.+.+|+. ..+. ...+......+..++|+|+ +..|+.++
T Consensus 166 ~~-l~s~s------------~D~~i~iW~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 166 AL-LASSS------------YDDTVRIWKD---YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp SE-EEEEE------------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred CE-EEEEc------------CCCeEEEEEC---CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence 86 55443 2336777776 2221 2234445567888999999 55566554
No 325
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.38 E-value=1.1e-11 Score=130.21 Aligned_cols=118 Identities=14% Similarity=0.026 Sum_probs=80.9
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC---------CcEEEe
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVLA 560 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------G~~v~~ 560 (752)
.+|..++.....+.. +..|.||++||.+... ..| ......|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~s~-----------~~~----~~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPGTP-----------VEF----LDIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTCCG-----------GGG----HHHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCCCH-----------HHH----HHHHHHHhCcccccCCCCCCeEEEE
Confidence 378889988776643 1258899999964211 111 1344556655 999999
Q ss_pred cCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 561 GPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 561 ~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
.+.+|+|.+.... .......+++.+.++.+ ..++++++||||||.+++.++.++|++++++|+.+|..
T Consensus 134 ---~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 134 ---PSLPGFGLSGPLKSAGWELGRIAMAWSKLMASL------GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ---ECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHT------TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred ---EcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 5566777664432 23344455444444332 23689999999999999999999999999999998643
No 326
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.38 E-value=2.3e-10 Score=117.07 Aligned_cols=283 Identities=13% Similarity=0.129 Sum_probs=166.5
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
.+-..|||++ .||.. .+..|+|+|+++|+..++...... ...+..+.|+|||+.|+..+.+
T Consensus 28 ~~~l~WS~~~-~lAvg-----------~D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs~D----- 88 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-----------LDNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSS----- 88 (318)
T ss_dssp CBCEEECTTS-EEEEE-----------ETTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETT-----
T ss_pred ceEEEECCCC-EEEEE-----------eCCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEECC-----
Confidence 3557999998 67763 236799999999987665432221 1136788999999998876431
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCccceeccccCCCCceEE
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVL 190 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~~~~~~~~~SpDGk~l~ 190 (752)
+.|.++++ +|+. ..+..+ ......++++++.|+
T Consensus 89 --------------------------------------------g~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~~l~ 123 (318)
T 4ggc_A 89 --------------------------------------------AEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILS 123 (318)
T ss_dssp --------------------------------------------SEEEEEETTTTEEEEEEECC-SSCEEEEEEETTEEE
T ss_pred --------------------------------------------CcEEEeecCCceeEEEecCc-cceEEEeecCCCEEE
Confidence 57888888 6643 333333 122335677788777
Q ss_pred EEecccCccccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
..+... .+..++...... ..+.... ..+....|+++|+. |+...
T Consensus 124 s~~~~~-------------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-l~s~~------- 169 (318)
T 4ggc_A 124 SGSRSG-------------HIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRH-LASGG------- 169 (318)
T ss_dssp EEETTS-------------EEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE-------
T ss_pred EEecCC-------------ceEeeecCCCceeEEEEcCcc-------------CceEEEEEcCCCCE-EEEEe-------
Confidence 665443 566666554322 2222222 12556899999996 54443
Q ss_pred ccccCccceEEeccCCCCCCC--CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccc
Q 004456 269 NVEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 346 (752)
..+.+.++|+...+.. ...........+...+|+|++..+++..... ....|.+++.... ..........
T Consensus 170 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~i~lwd~~~~--~~~~~~~~~~ 241 (318)
T 4ggc_A 170 -----NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT-SDRHIRIWNVCSG--ACLSAVDAHS 241 (318)
T ss_dssp -----TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT-TTCEEEEEETTTC--CEEEEEECSS
T ss_pred -----cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC-CCCEEEEEecccc--ccccccccee
Confidence 3346788887311110 1222334455678889999988877654222 3345777777663 2111111111
Q ss_pred ccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeee
Q 004456 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (752)
Q Consensus 347 ~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (752)
......|+++++.++..+.. ....|++||+.+++.......... .+..
T Consensus 242 -------~v~~~~~~~~~~~~~~~sg~-------------------~d~~i~iwd~~~~~~~~~l~gH~~----~V~~-- 289 (318)
T 4ggc_A 242 -------QVCSILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RVLS-- 289 (318)
T ss_dssp -------CEEEEEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CEEE--
T ss_pred -------eeeeeeecccccceEEEEEc-------------------CCCEEEEEECCCCcEEEEEcCCCC----CEEE--
Confidence 11125689999988877521 122599999998876554433211 2333
Q ss_pred cCCcceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 004456 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (752)
Q Consensus 427 ~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g 462 (752)
++|||||+.|+-.. . -..|.+||+...
T Consensus 290 -----l~~spdg~~l~S~s-~---D~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 -----LTMSPDGATVASAA-A---DETLRLWRCFEL 316 (318)
T ss_dssp -----EEECTTSSCEEEEE-T---TTEEEEECCSCC
T ss_pred -----EEEcCCCCEEEEEe-c---CCeEEEEECCCC
Confidence 48999999876433 2 345888886543
No 327
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.37 E-value=1.3e-10 Score=122.59 Aligned_cols=236 Identities=8% Similarity=0.013 Sum_probs=139.1
Q ss_pred cEEEEEcc-CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCC
Q 004456 157 AQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (752)
Q Consensus 157 ~~i~~~~~-~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (752)
+.|.+||+ ++ ....+..+ ..+..++|+|||++|+..+.+. .+.+|++.+..... .....
T Consensus 88 ~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~-------------~v~iw~~~~~~~~~-----~~~~~ 149 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS-------------ACSIFNLSSQADRD-----GNMPV 149 (380)
T ss_dssp SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS-------------CCEEEECCCCSSCC-----CSSTT
T ss_pred CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC-------------cEEEEECCCCcccc-----CCccc
Confidence 57899998 66 34444444 6788999999999998775553 78889886542110 00001
Q ss_pred CcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe------ecccceeeeeee
Q 004456 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH------KLDLRFRSVSWC 307 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~------~~~~~~~~~~~s 307 (752)
...+.++...+..+.|+|++...|+..+ ..+.+.+||+ ..+...... .....+..++|+
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s------------~D~~i~~wd~---~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGS------------GDQTCVLWDV---TTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEEC------------TTSCEEEECT---TTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEEC------------CCCcEEEEEc---CCCcEEEEeecccCCCCccCeEEEEee
Confidence 1122333444677899998765244332 3447888888 333332222 223456778887
Q ss_pred c-CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccC
Q 004456 308 D-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (752)
Q Consensus 308 p-Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (752)
+ +++.|+.++ ....|.++|+... ............ ....++|+|||++|+..+.++
T Consensus 215 ~~~~~~l~sgs----~D~~v~~wd~~~~-~~~~~~~~~h~~------~v~~v~~~p~~~~l~s~s~D~------------ 271 (380)
T 3iz6_a 215 SLNANMFISGS----CDTTVRLWDLRIT-SRAVRTYHGHEG------DINSVKFFPDGQRFGTGSDDG------------ 271 (380)
T ss_dssp SSSCCEEEEEE----TTSCEEEEETTTT-CCCCEEECCCSS------CCCEEEECTTSSEEEEECSSS------------
T ss_pred cCCCCEEEEEE----CCCeEEEEECCCC-CcceEEECCcCC------CeEEEEEecCCCeEEEEcCCC------------
Confidence 6 777777665 2234777777642 122222221111 122378999999988776331
Q ss_pred CCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 387 GFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
.|.+||+.+++....+..... ...........++|||+|+.|+.... ...|++||...++..
T Consensus 272 ---------~i~lwd~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~~g~~----dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 272 ---------TCRLFDMRTGHQLQVYNREPD----RNDNELPIVTSVAFSISGRLLFAGYS----NGDCYVWDTLLAEMV 333 (380)
T ss_dssp ---------CEEEEETTTTEEEEEECCCCS----SSCCSSCSCSEEEECSSSSEEEEECT----TSCEEEEETTTCCEE
T ss_pred ---------eEEEEECCCCcEEEEeccccc----ccccccCceEEEEECCCCCEEEEEEC----CCCEEEEECCCCceE
Confidence 489999998877655443211 00000011234689999998876532 345999998776644
No 328
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.37 E-value=8.8e-11 Score=122.81 Aligned_cols=272 Identities=13% Similarity=0.100 Sum_probs=156.8
Q ss_pred eeceeEecCC---CCeEEEeeccccccccccCcceEEEEEccc-Ccc--eeccCCCCccccccccceEEecCCcEEEEEe
Q 004456 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (752)
Q Consensus 32 ~~~~~~~SPD---G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~-g~~--~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (752)
.+...+|||| |++||... ....|.++++++ +.. +.+..+.. .+..+.|+||++.|+..+
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGS----------WANDVRCWEVQDSGQTIPKAQQMHTG-----PVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEE----------TTSEEEEEEECTTSCEEEEEEEECSS-----CEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEcCCCCCceEEEEEC----------CCCcEEEEEcCCCCceeEEEeccccC-----CEEEEEECcCCCEEEEEc
Confidence 6899999999 68888863 336788888876 443 23322222 467889999999888763
Q ss_pred cCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc-cceecccc-
Q 004456 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEP- 182 (752)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~-~~~~~~~~- 182 (752)
. .+.|.++++ +++...+..+ ..+..+.|
T Consensus 106 ~-------------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 106 C-------------------------------------------------DKTAKMWDLSSNQAIQIAQHDAPVKTIHWI 136 (368)
T ss_dssp T-------------------------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred C-------------------------------------------------CCcEEEEEcCCCCceeeccccCceEEEEEE
Confidence 2 157899999 5555555444 78889999
Q ss_pred -CCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEE
Q 004456 183 -SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (752)
Q Consensus 183 -SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~ 261 (752)
+|||+.|+....+. .+.+||+.+++......... ....+.+.+.. ++...
T Consensus 137 ~~~~~~~l~~~~~dg-------------~i~vwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~ 187 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDK-------------TLKFWDTRSSNPMMVLQLPE---------------RCYCADVIYPM-AVVAT 187 (368)
T ss_dssp ECSSCEEEEEEETTS-------------EEEEECSSCSSCSEEEECSS---------------CEEEEEEETTE-EEEEE
T ss_pred eCCCCCEEEEccCCC-------------cEEEEECCCCcEEEEEecCC---------------CceEEEecCCe-eEEEe
Confidence 99999998876653 79999988664433222211 12344444444 43332
Q ss_pred eccCCCCccccCccceEEeccCCCCCCCCCeE--Ee-ecccceeeeeeecCCce----EEEeeecccCceeEEEEcCCCC
Q 004456 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI--LH-KLDLRFRSVSWCDDSLA----LVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--l~-~~~~~~~~~~~spDg~~----l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
..+.+.++++ ....... +. ..........+.+++.. ++... ....|.++++...
T Consensus 188 ------------~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 188 ------------AERGLIVYQL---ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS----IEGRVAIHYINPP 248 (368)
T ss_dssp ------------GGGCEEEEEC---SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE----TTSEEEEEESSCS
T ss_pred ------------CCCcEEEEEe---ccccchhhhccccccCCCceEEEcccCCCCCCeEEEec----CCCcEEEEecCCC
Confidence 2335667776 2221111 11 11223344445544433 55554 3335666666653
Q ss_pred Cc-cce-ecccccccccc---CC--CCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCce
Q 004456 335 DV-APR-VLFDRVFENVY---SD--PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK 407 (752)
Q Consensus 335 ~~-~~~-~l~~~~~~~~~---~~--~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~ 407 (752)
.. ... .+......... .. ...-.++|+|||++|+....+ | .|.+||+.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-------------g--------~i~iwd~~~~~~ 307 (368)
T 3mmy_A 249 NPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD-------------G--------RFSFWDKDARTK 307 (368)
T ss_dssp CHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT-------------S--------CEEEEETTTTEE
T ss_pred CccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC-------------C--------eEEEEECCCCcE
Confidence 11 111 11111100000 00 001126799999998887632 1 499999998876
Q ss_pred eEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEec
Q 004456 408 ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (752)
Q Consensus 408 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~ 447 (752)
......... .+. .++|+|||+.|+.....
T Consensus 308 ~~~~~~~~~----~v~-------~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 308 LKTSEQLDQ----PIS-------ACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEECCCCSS----CEE-------EEEECTTSSCEEEEECC
T ss_pred EEEecCCCC----Cce-------EEEECCCCCeEEEEecc
Confidence 544332211 122 35899999998887543
No 329
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.36 E-value=1.9e-11 Score=123.47 Aligned_cols=208 Identities=16% Similarity=0.126 Sum_probs=121.8
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCC
Q 004456 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (752)
Q Consensus 490 ~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (752)
.+|.+++.... + ..|.||++||.+... ..|. ..... ++.+|.|++ .+.+|+
T Consensus 12 ~~~~~~~~~~~---g-------~g~~~vllHG~~~~~-----------~~w~----~~~~~-l~~~~~vi~---~Dl~G~ 62 (291)
T 3qyj_A 12 TTEARINLVKA---G-------HGAPLLLLHGYPQTH-----------VMWH----KIAPL-LANNFTVVA---TDLRGY 62 (291)
T ss_dssp CSSCEEEEEEE---C-------CSSEEEEECCTTCCG-----------GGGT----TTHHH-HTTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEEc---C-------CCCeEEEECCCCCCH-----------HHHH----HHHHH-HhCCCEEEE---EcCCCC
Confidence 46667776543 1 147799999964211 1222 23333 457899999 566777
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC---
Q 004456 570 GDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK--- 639 (752)
Q Consensus 570 g~~~~~~-------~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~--- 639 (752)
|.+..+. .......+|+.+.++.+ . .+++.++||||||.+|+.++.++|++++++|++++....
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~ 136 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL---G---YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMY 136 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHH
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc---C---CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhh
Confidence 7765432 12344455555554433 2 358999999999999999999999999999988643100
Q ss_pred --C--------------CCccCccc----------------------cccch---------hhhH-------HHHHhcC-
Q 004456 640 --T--------------LTPFGFQT----------------------EFRTL---------WEAT-------NVYIEMS- 664 (752)
Q Consensus 640 --~--------------~~~~~~~~----------------------~~~~~---------~~~~-------~~~~~~~- 664 (752)
. ........ ....+ +..+ ..|....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 3qyj_A 137 RTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAAT 216 (291)
T ss_dssp HTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTT
T ss_pred hcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccc
Confidence 0 00000000 00000 0000 0011000
Q ss_pred ------hhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCccccHHHHHHHHHHHHH
Q 004456 665 ------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 738 (752)
Q Consensus 665 ------~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 738 (752)
......++++|+|+++|++|...+ ... ..+.++..-..++..+++ +||.+. .+.++.+.+.+.+||.
T Consensus 217 ~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~--~~~---~~~~~~~~~~~~~~~~~~-~GH~~~-~E~P~~v~~~i~~fL~ 289 (291)
T 3qyj_A 217 IDLEHDELDMKQKISCPVLVLWGEKGIIGR--KYD---VLATWRERAIDVSGQSLP-CGHFLP-EEAPEETYQAIYNFLT 289 (291)
T ss_dssp HHHHHHHTTTTCCBCSCEEEEEETTSSHHH--HSC---HHHHHHTTBSSEEEEEES-SSSCHH-HHSHHHHHHHHHHHHH
T ss_pred cchhhcchhcCCccccceEEEecccccccc--hhh---HHHHHHhhcCCcceeecc-CCCCch-hhCHHHHHHHHHHHHh
Confidence 011245688999999999996532 111 122333333567778886 899654 7788999999999986
Q ss_pred H
Q 004456 739 K 739 (752)
Q Consensus 739 ~ 739 (752)
+
T Consensus 290 ~ 290 (291)
T 3qyj_A 290 H 290 (291)
T ss_dssp C
T ss_pred c
Confidence 4
No 330
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.36 E-value=2.4e-11 Score=127.13 Aligned_cols=263 Identities=10% Similarity=0.086 Sum_probs=153.0
Q ss_pred eeEEeecCCCCCCCCceeecCCC---CCceeceeEecCC----CCeEEEeeccccccccccCcceEEEEEcccCcceecc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYP---DGAKINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~SPD----G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt 78 (752)
.|.++++... +..+.+.... ....+...+|+|| |++|+... ....|.++++.+++.....
T Consensus 45 ~v~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~----------~dg~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 45 RVTLYECHSQ---GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG----------SRGIIRIINPITMQCIKHY 111 (366)
T ss_dssp EEEEEEECGG---GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE----------TTCEEEEECTTTCCEEEEE
T ss_pred EEEEEEcCCC---cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec----------CCCEEEEEEchhceEeeee
Confidence 4677777641 2333443221 2235888999999 56777753 3468999999887754433
Q ss_pred CCCCccccccccceEEec-CCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhccc
Q 004456 79 ESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (752)
.... ..+..+.|+| +++.|+..+. .+
T Consensus 112 ~~~~----~~i~~~~~~~~~~~~l~s~~~-------------------------------------------------dg 138 (366)
T 3k26_A 112 VGHG----NAINELKFHPRDPNLLLSVSK-------------------------------------------------DH 138 (366)
T ss_dssp ESCC----SCEEEEEECSSCTTEEEEEET-------------------------------------------------TS
T ss_pred cCCC----CcEEEEEECCCCCCEEEEEeC-------------------------------------------------CC
Confidence 3221 1467889999 8888876632 15
Q ss_pred EEEEEcc-CCCc-ccc---CCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCC----
Q 004456 158 QLVLGSL-DGTA-KDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL---- 227 (752)
Q Consensus 158 ~i~~~~~-~G~~-~~l---~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---- 227 (752)
.|.++++ +++. ..+ ..+ ..+..+.|+|||+.|+....+. .+.+||+.+++.......
T Consensus 139 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------~i~i~d~~~~~~~~~~~~~~~~ 205 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-------------SLKLWRINSKRMMNAIKESYDY 205 (366)
T ss_dssp CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESCSHHHHHHHHHHHTC
T ss_pred eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC-------------CEEEEECCCCccccccceeEEe
Confidence 7888998 5633 333 234 7889999999999998876653 799999886643211100
Q ss_pred -CCCCC---------CC--cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-----
Q 004456 228 -PPAED---------IP--VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----- 290 (752)
Q Consensus 228 -~~~~~---------~~--~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----- 290 (752)
+.... .+ .........+..+.|+ |+. |+... ..+.|.+|++. ...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~~~~------------~d~~i~~wd~~---~~~~~~~~ 267 (366)
T 3k26_A 206 NPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL-ILSKS------------CENAIVCWKPG---KMEDDIDK 267 (366)
T ss_dssp CGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE-EEEEC------------SSSEEEEEEES---STTCCGGG
T ss_pred cCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE-EEEEe------------cCCEEEEEeCC---Cccccccc
Confidence 00000 00 0001123346678888 554 44332 33467777763 211
Q ss_pred ----------CeEEeecccceeeeeeecC--CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCce
Q 004456 291 ----------PEILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM 358 (752)
Q Consensus 291 ----------~~~l~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~ 358 (752)
...+......+..++|+|| |+.|+.+. ..+.|+++++.++......+........ ....-.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v~~~ 341 (366)
T 3k26_A 268 IKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN----QVGKLYVWDLEVEDPHKAKCTTLTHHKC--GAAIRQT 341 (366)
T ss_dssp CCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC----TTSCEEEEECCSSSGGGCEEEEECCTTC--CSCEEEE
T ss_pred cccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe----cCCcEEEEECCCCCCccccceEEccccc--CCceEEE
Confidence 1122233445778899999 99888875 3345888888774211111111111000 0011236
Q ss_pred eeCCCCCeEEEee
Q 004456 359 TRTSTGTNVIAKI 371 (752)
Q Consensus 359 ~~s~dg~~l~~~~ 371 (752)
+|+|||++|+...
T Consensus 342 ~~s~~~~~l~s~~ 354 (366)
T 3k26_A 342 SFSRDSSILIAVC 354 (366)
T ss_dssp EECTTSSEEEEEE
T ss_pred EeCCCCCeEEEEe
Confidence 7999999998876
No 331
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.36 E-value=9.8e-11 Score=126.59 Aligned_cols=195 Identities=9% Similarity=0.037 Sum_probs=126.4
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcc--cCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~--~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
.+...+|||||++|+++.. ....|.++++. +++..+..... .....+..+.|+|||+.|++...
T Consensus 104 ~v~~~~~s~d~~~l~~~~~---------~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD---------SDKSLLVFDVDKTSKNVLKLRKRF--CFSKRPNAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG---------GGTEEEEEEECSSSSSCEEEEEEE--ECSSCEEEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEEC---------CCCeEEEEECcCCCCceeeeeecc--cCCCCceEEEEcCCCCEEEEEeC---
Confidence 4888999999999866542 23567777877 66654432110 00113568899999999987632
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc-----ccCCc-cceecccc
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-----DFGTP-AVYTAVEP 182 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-----~l~~~-~~~~~~~~ 182 (752)
.+.|+.+++ +++.. .+..+ ..+..++|
T Consensus 170 ----------------------------------------------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 203 (450)
T 2vdu_B 170 ----------------------------------------------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHL 203 (450)
T ss_dssp ----------------------------------------------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEE
T ss_pred ----------------------------------------------CCcEEEEecCCcccccccceeeecccCceEEEEE
Confidence 157899998 55433 23333 67889999
Q ss_pred CCC---CceEEEEecccCccccccccCccccEEEEecCCceeEEe-cCCCCCCCCCcccCCccccccceeeeeCCCceEE
Q 004456 183 SPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (752)
Q Consensus 183 SpD---Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~ 258 (752)
+|| |++|+..+.+ ..|.+||+.++..... ... ....+..+.|+ ||+. |+
T Consensus 204 sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~~~~------------h~~~v~~~~~s-d~~~-l~ 256 (450)
T 2vdu_B 204 IKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKWLFG------------HKHFVSSICCG-KDYL-LL 256 (450)
T ss_dssp EECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEECCC------------CSSCEEEEEEC-STTE-EE
T ss_pred cCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeeeecC------------CCCceEEEEEC-CCCE-EE
Confidence 999 8888877655 3799999986643322 211 11236789999 9996 55
Q ss_pred EEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEe-------------------------ecccceeeeeeecCCce
Q 004456 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH-------------------------KLDLRFRSVSWCDDSLA 312 (752)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~-------------------------~~~~~~~~~~~spDg~~ 312 (752)
..+ ..+.|.+||+ .++.. ..+. .....+..++|+||++.
T Consensus 257 s~~------------~d~~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 257 SAG------------GDDKIFAWDW---KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp EEE------------SSSEEEEEET---TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred EEe------------CCCeEEEEEC---CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 553 3347888988 33332 3332 11234678899999999
Q ss_pred EEEeeecccCceeEEEEcC
Q 004456 313 LVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 313 l~~~~~~~~~~~~l~~~~~ 331 (752)
|+.+...+ + .|.++++
T Consensus 322 l~~~~~~d-~--~i~iw~~ 337 (450)
T 2vdu_B 322 VAFFVEAT-K--CIIILEM 337 (450)
T ss_dssp EEEEETTC-S--EEEEEEE
T ss_pred EEEEECCC-C--eEEEEEe
Confidence 88876332 3 3555555
No 332
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.36 E-value=1e-10 Score=134.04 Aligned_cols=219 Identities=13% Similarity=0.074 Sum_probs=139.6
Q ss_pred cceeEEeecCCCCCC-C-CceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCC
Q 004456 4 FTGIGIHRLLPDDSL-G-PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFES 80 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~-g-~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~ 80 (752)
...|.++++..+... + ..+.++++. ..+...+|||||++|+..+ ....|.++++.+++..+ +..+
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs----------~Dg~v~vwd~~~~~~~~~~~~h 471 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGS----------WDGELRLWDLAAGVSTRRFVGH 471 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCcceeEEeCC
Confidence 356778887652111 1 123444333 2488899999999998863 34789999998876543 3323
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
.. .+..+.|+||++.|+..+.+ +.|.
T Consensus 472 ~~-----~v~~~~~s~~~~~l~s~s~D-------------------------------------------------~~i~ 497 (694)
T 3dm0_A 472 TK-----DVLSVAFSLDNRQIVSASRD-------------------------------------------------RTIK 497 (694)
T ss_dssp SS-----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEE
T ss_pred CC-----CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CEEE
Confidence 22 46788999999988876431 4677
Q ss_pred EEccCC-CccccC----Cc-cceeccccCCCCc--eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC
Q 004456 161 LGSLDG-TAKDFG----TP-AVYTAVEPSPDQK--YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (752)
Q Consensus 161 ~~~~~G-~~~~l~----~~-~~~~~~~~SpDGk--~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (752)
++++.+ ....+. .+ ..+..+.|+|++. .|+..+.+ +.|.+||+.+.+.......
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-------------~~v~vwd~~~~~~~~~~~~----- 559 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-------------KTVKVWNLSNCKLRSTLAG----- 559 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-------------SCEEEEETTTCCEEEEECC-----
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-------------CeEEEEECCCCcEEEEEcC-----
Confidence 788744 222221 12 5678999999984 45444433 3799999987654432221
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCce
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA 312 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~ 312 (752)
+...+..++|+|||+. |+..+ ..+.|.+||+ ..+...........+..++||||+..
T Consensus 560 -------h~~~v~~v~~spdg~~-l~sg~------------~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~ 616 (694)
T 3dm0_A 560 -------HTGYVSTVAVSPDGSL-CASGG------------KDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYW 616 (694)
T ss_dssp -------CSSCEEEEEECTTSSE-EEEEE------------TTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSE
T ss_pred -------CCCCEEEEEEeCCCCE-EEEEe------------CCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcE
Confidence 1123678999999996 55443 3447888888 33322222234556788999999987
Q ss_pred EEEeeecccCceeEEEEcCCCC
Q 004456 313 LVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 313 l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
|+... . ..|.++++.++
T Consensus 617 l~~~~-~----~~i~iwd~~~~ 633 (694)
T 3dm0_A 617 LCAAT-E----HGIKIWDLESK 633 (694)
T ss_dssp EEEEE-T----TEEEEEETTTT
T ss_pred EEEEc-C----CCEEEEECCCC
Confidence 77654 1 23788888764
No 333
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.35 E-value=1.2e-11 Score=126.38 Aligned_cols=202 Identities=15% Similarity=0.053 Sum_probs=121.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.||++||.... + ....+..++..| ..+|.|++ .+.+|+|.+............++.+.++.
T Consensus 81 ~~~lv~lhG~~~~---------~----~~~~~~~~~~~L-~~~~~v~~---~d~~G~G~~~~~~~~~~~~~~~~~~~l~~ 143 (319)
T 3lcr_A 81 GPQLILVCPTVMT---------T----GPQVYSRLAEEL-DAGRRVSA---LVPPGFHGGQALPATLTVLVRSLADVVQA 143 (319)
T ss_dssp SCEEEEECCSSTT---------C----SGGGGHHHHHHH-CTTSEEEE---EECTTSSTTCCEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcC---------C----CHHHHHHHHHHh-CCCceEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5889999993100 0 011122344455 78999999 55567776544444455666666666554
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCC-cc-Ccccc-ccchhhh----------
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLT-PF-GFQTE-FRTLWEA---------- 656 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---p~~~~~~v~~~~~~~~~~~-~~-~~~~~-~~~~~~~---------- 656 (752)
+.. ..++.|+||||||.+++.++.+. |++++++|++++....... .. .+... .......
T Consensus 144 ~~~-----~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (319)
T 3lcr_A 144 EVA-----DGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNL 218 (319)
T ss_dssp HHT-----TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_pred hcC-----CCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCch
Confidence 432 25899999999999999999887 7889999998875432110 00 00000 0000000
Q ss_pred ------HHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccCCcc-ccHHHH
Q 004456 657 ------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-ENVMHV 729 (752)
Q Consensus 657 ------~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~-~~~~~~ 729 (752)
...+...........+++|+|+++|++| .++ +.....+.+.+.. ..+++++++ +|..... +....+
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~~-~~~--~~~~~~~~~~~~~---~~~~~~~~g-~H~~~~~~~~~~~v 291 (319)
T 3lcr_A 219 SQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQP-LVE--QEKPEWRGDVLAA---MGQVVEAPG-DHFTIIEGEHVAST 291 (319)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESSC-SSS--CCCTHHHHHHHHT---CSEEEEESS-CTTGGGSTTTHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCCC-CCC--cccchhhhhcCCC---CceEEEeCC-CcHHhhCcccHHHH
Confidence 0001110011122567899999999984 554 4555566665543 357888886 5654434 578899
Q ss_pred HHHHHHHHHHHhcC
Q 004456 730 IWETDRWLQKYCLS 743 (752)
Q Consensus 730 ~~~~~~fl~~~l~~ 743 (752)
.+.+.+||.+....
T Consensus 292 a~~i~~fL~~~~~~ 305 (319)
T 3lcr_A 292 AHIVGDWLREAHAH 305 (319)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhcccc
Confidence 99999999987643
No 334
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.35 E-value=1.7e-10 Score=119.44 Aligned_cols=245 Identities=6% Similarity=-0.031 Sum_probs=154.1
Q ss_pred cceeEEeecCCCCCCCC----ceeecCCCCCceeceeEecCCCC-eEEEeeccccccccccCcceEEEEEc-ccCcceec
Q 004456 4 FTGIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA-ETGEAKPL 77 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~----~~~i~~~~~~~~~~~~~~SPDG~-~ia~~~~~~~~~~~~~~~~~l~v~~~-~~g~~~~l 77 (752)
...|.++++.. +. .+.+... ...+....|+|||+ +|+... ....|+++++ ++++.+.+
T Consensus 32 d~~v~iw~~~~----~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~----------~dg~i~~wd~~~~~~~~~~ 95 (342)
T 1yfq_A 32 DGSLTVYKFDI----QAKNVDLLQSLRY--KHPLLCCNFIDNTDLQIYVGT----------VQGEILKVDLIGSPSFQAL 95 (342)
T ss_dssp TSEEEEEEEET----TTTEEEEEEEEEC--SSCEEEEEEEESSSEEEEEEE----------TTSCEEEECSSSSSSEEEC
T ss_pred CCeEEEEEeCC----CCccccceeeeec--CCceEEEEECCCCCcEEEEEc----------CCCeEEEEEeccCCceEec
Confidence 35678888876 55 4444422 33588999999999 888753 3468999999 88888777
Q ss_pred cC--CCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhc
Q 004456 78 FE--SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (752)
Q Consensus 78 t~--~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (752)
.. +.. .+..+.|+| ++.|+..+.+
T Consensus 96 ~~~~~~~-----~v~~l~~~~-~~~l~s~~~d------------------------------------------------ 121 (342)
T 1yfq_A 96 TNNEANL-----GICRICKYG-DDKLIAASWD------------------------------------------------ 121 (342)
T ss_dssp BSCCCCS-----CEEEEEEET-TTEEEEEETT------------------------------------------------
T ss_pred cccCCCC-----ceEEEEeCC-CCEEEEEcCC------------------------------------------------
Confidence 54 333 467889999 8888766321
Q ss_pred ccEEEEEcc-C---------CC-ccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC-cee--
Q 004456 156 TAQLVLGSL-D---------GT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLV-- 221 (752)
Q Consensus 156 ~~~i~~~~~-~---------G~-~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~-- 221 (752)
+.|.++++ + ++ ...+.....+..+.|+|++ |+....+ +.+.+||+.+ ...
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d-------------~~i~i~d~~~~~~~~~ 185 (342)
T 1yfq_A 122 -GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN-------------SQVQWFRLPLCEDDNG 185 (342)
T ss_dssp -SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST-------------TEEEEEESSCCTTCCC
T ss_pred -CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC-------------CeEEEEECCccccccc
Confidence 57888887 4 53 2333333788899999998 5555443 3799999987 321
Q ss_pred EEecCCCCCCCCCcccCCccccccceeeee-CCCceEEEEEeccCCCCccccCccceEEeccCCCCC-----CCCCeEEe
Q 004456 222 RELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-----GEKPEILH 295 (752)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~l~ 295 (752)
...... ....+..+.|+| ||+. ++... ..+.+.+++.+. . ......+.
T Consensus 186 ~~~~~~------------~~~~i~~i~~~~~~~~~-l~~~~------------~dg~i~i~~~~~-~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 186 TIEESG------------LKYQIRDVALLPKEQEG-YACSS------------IDGRVAVEFFDD-QGDDYNSSKRFAFR 239 (342)
T ss_dssp EEEECS------------CSSCEEEEEECSGGGCE-EEEEE------------TTSEEEEEECCT-TCCSTTCTTCEEEE
T ss_pred eeeecC------------CCCceeEEEECCCCCCE-EEEEe------------cCCcEEEEEEcC-CCcccccccceeee
Confidence 111111 112267899999 9986 55543 233666666521 1 12333343
Q ss_pred ecc---------cceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCe
Q 004456 296 KLD---------LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 366 (752)
Q Consensus 296 ~~~---------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~ 366 (752)
... ..+..++|+||++.|+.+. ....|+++++.++ +........ +..+..+.+|||++
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~--~~~~~~~~~-------h~~~v~~~~~~~~~ 306 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG----SDGIISCWNLQTR--KKIKNFAKF-------NEDSVVKIACSDNI 306 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEE----TTSCEEEEETTTT--EEEEECCCC-------SSSEEEEEEECSSE
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEec----CCceEEEEcCccH--hHhhhhhcc-------cCCCceEecCCCCe
Confidence 332 2788899999999988776 3345888898874 222211111 01111112299999
Q ss_pred EEEeeee
Q 004456 367 VIAKIKK 373 (752)
Q Consensus 367 l~~~~~~ 373 (752)
|+..+.+
T Consensus 307 l~s~s~D 313 (342)
T 1yfq_A 307 LCLATSD 313 (342)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9888754
No 335
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.35 E-value=2.4e-10 Score=128.88 Aligned_cols=222 Identities=10% Similarity=0.052 Sum_probs=142.6
Q ss_pred ceeEEeecCCCCCCC-----CceeecCCCCCce-eceeEecC--CCCeEEEeeccccccccccCcceEEEEEcccC----
Q 004456 5 TGIGIHRLLPDDSLG-----PEKEVHGYPDGAK-INFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETG---- 72 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g-----~~~~i~~~~~~~~-~~~~~~SP--DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g---- 72 (752)
..|.++++.. + ..+.+.. .... +...+||| ||++||... ....|.+++++++
T Consensus 39 ~~v~v~~~~~----~~~~~~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s~~----------~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 39 KSAFVRCLDD----GDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGD----------ESGKVIVWGWTFDKESN 102 (615)
T ss_dssp TEEEEEECCS----SCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEEEE----------TTSEEEEEEEEEEGGGT
T ss_pred CeEEEEECCC----CCCccccceEEec--CCCceEEEEEECcCCCCCEEEEec----------CCCEEEEEeCCCCcccc
Confidence 3577888765 4 3334432 2235 88999999 999999863 2367888888655
Q ss_pred --cce---eccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhh
Q 004456 73 --EAK---PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYD 147 (752)
Q Consensus 73 --~~~---~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 147 (752)
+.+ .+..+.. .+..+.|+|||+.|+........
T Consensus 103 ~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~~~------------------------------------- 140 (615)
T 1pgu_A 103 SVEVNVKSEFQVLAG-----PISDISWDFEGRRLCVVGEGRDN------------------------------------- 140 (615)
T ss_dssp EEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEECCSSC-------------------------------------
T ss_pred cccccccchhhcccc-----cEEEEEEeCCCCEEEEeccCCCC-------------------------------------
Confidence 222 2221221 46788999999999887432111
Q ss_pred hhhhhhhcccEEEEEccCCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecC
Q 004456 148 ESLFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (752)
Q Consensus 148 ~~~~~~~~~~~i~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 226 (752)
...|++++.......+..+ ..+..+.|+|||+.++++.... +.+.+||+.+.+......
T Consensus 141 --------~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------~~v~vwd~~~~~~~~~~~ 200 (615)
T 1pgu_A 141 --------FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD------------GSVVFYQGPPFKFSASDR 200 (615)
T ss_dssp --------SEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT------------TEEEEEETTTBEEEEEEC
T ss_pred --------ccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCC------------CcEEEEeCCCcceeeeec
Confidence 1578888843344455555 7888999999999544443332 479999988775543322
Q ss_pred CCCCCCCCcccCCccccccceeeeeC-CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEE-e---ecccc
Q 004456 227 LPPAEDIPVCYNSVREGMRSISWRAD-KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EIL-H---KLDLR 300 (752)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspD-G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l-~---~~~~~ 300 (752)
...... ..+..+.|+|| |+. |+... ..+.+.+||+ ..+.. ..+ . .....
T Consensus 201 ~~~~~~---------~~v~~~~~~~~~~~~-l~~~~------------~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 201 THHKQG---------SFVRDVEFSPDSGEF-VITVG------------SDRKISCFDG---KSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp SSSCTT---------CCEEEEEECSTTCCE-EEEEE------------TTCCEEEEET---TTCCEEEECCBTTBCCCSC
T ss_pred ccCCCC---------ceEEEEEECCCCCCE-EEEEe------------CCCeEEEEEC---CCCCEeEEecccccccCCc
Confidence 111000 03678999999 886 55543 3447888988 33333 333 2 45567
Q ss_pred eeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 301 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+..++|+ |++.|+... ....|.++++.++
T Consensus 256 v~~~~~~-~~~~l~~~~----~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 256 IFALSWL-DSQKFATVG----ADATIRVWDVTTS 284 (615)
T ss_dssp EEEEEES-SSSEEEEEE----TTSEEEEEETTTT
T ss_pred eEEEEEc-CCCEEEEEc----CCCcEEEEECCCC
Confidence 8899999 999888876 3345888888764
No 336
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.34 E-value=8.8e-13 Score=142.24 Aligned_cols=211 Identities=18% Similarity=0.120 Sum_probs=132.2
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCC-cEEEecCCC-CCCCCCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGEGD 571 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~g~ 571 (752)
-+...+|.|... .+++|+||++|||++..++... . ......|+++| ++|+.++++ +..|++.
T Consensus 82 cL~l~v~~P~~~----~~~~PviV~iHGGg~~~g~~~~--------~----~~~~~~la~~g~~vvv~~nYRlg~~Gf~~ 145 (489)
T 1qe3_A 82 CLYVNVFAPDTP----SQNLPVMVWIHGGAFYLGAGSE--------P----LYDGSKLAAQGEVIVVTLNYRLGPFGFLH 145 (489)
T ss_dssp CCEEEEEEECSS----CCSEEEEEEECCSTTTSCCTTS--------G----GGCCHHHHHHHTCEEEEECCCCHHHHSCC
T ss_pred CCEEEEEeCCCC----CCCCCEEEEECCCccccCCCCC--------c----ccCHHHHHhcCCEEEEecCccCcccccCc
Confidence 467778888752 1238999999999865433211 1 11234566665 999998886 3334433
Q ss_pred CCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCCCCCCc-
Q 004456 572 KLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTP- 643 (752)
Q Consensus 572 ~~~--~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~~~~~~~- 643 (752)
... ........+.|+.++++|+++.. ..|++||.|+|+|+||++++.++... +++|+++|+.+|..+.....
T Consensus 146 ~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~ 225 (489)
T 1qe3_A 146 LSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQ 225 (489)
T ss_dssp CTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHH
T ss_pred cccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHH
Confidence 211 11122345788999999998863 36899999999999999998887653 56899999999976321100
Q ss_pred -----------cCccccc-cchh--hhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 004456 644 -----------FGFQTEF-RTLW--EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 709 (752)
Q Consensus 644 -----------~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~ 709 (752)
.+..... ..+. ...+.+...+++........|.+++++..|..+. +.+..+++++.+..++++.
T Consensus 226 ~~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~ 303 (489)
T 1qe3_A 226 AASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLL 303 (489)
T ss_dssp HHHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEE
Confidence 0000000 0000 0001111111111111233557888999998876 7777788887777889999
Q ss_pred EEEeCCCCccCCc
Q 004456 710 LVLLPFEHHVYAA 722 (752)
Q Consensus 710 ~~~~~~~~H~~~~ 722 (752)
+-..++.+|.+..
T Consensus 304 ~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 304 IGTTRDEGYLFFT 316 (489)
T ss_dssp EEEETTGGGGTCC
T ss_pred EeeecchhHhhcc
Confidence 9999999998754
No 337
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.33 E-value=2.2e-11 Score=128.25 Aligned_cols=217 Identities=11% Similarity=0.131 Sum_probs=131.3
Q ss_pred cceeEEeecCCCCCCCCceeecCCC-CCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc----ceecc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLF 78 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~----~~~lt 78 (752)
...|.++++.. +..+.+..+. ....+...+|||||++|+..+ ....|.++++++++ ...+.
T Consensus 32 d~~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----------~d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 32 TNQVELYEQDG----NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS----------QDRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SSCBCEEEEET----TEEEECCCBCCCSSCEEEEEECTTTCCEEEEE----------TTSSEEEC------CCCCEEECC
T ss_pred CCEEEEEEccC----CceEEEEEEecCCceEEEEEEeCCCCEEEEEe----------CCCeEEEEEcCCCCceeeeeEec
Confidence 34577777766 5323332222 233688999999999999864 23578888888876 23332
Q ss_pred CCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
.+.. .+..+.|+||++.|+..+.+ +.
T Consensus 98 ~~~~-----~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~ 123 (377)
T 3dwl_C 98 RLNR-----AATFVRWSPNEDKFAVGSGA-------------------------------------------------RV 123 (377)
T ss_dssp CCSS-----CEEEEECCTTSSCCEEEESS-------------------------------------------------SC
T ss_pred ccCC-----ceEEEEECCCCCEEEEEecC-------------------------------------------------Ce
Confidence 2222 46788999999988876431 46
Q ss_pred EEEEcc-CCC----ccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCC-CC
Q 004456 159 LVLGSL-DGT----AKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP-PA 230 (752)
Q Consensus 159 i~~~~~-~G~----~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~ 230 (752)
|.++++ .++ ...+.. + ..+..++|+|||++|+..+.+. .+.+||+............ ..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-------------KAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-------------CEEEEEECCSSCC-CCCSCSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-------------EEEEEEEEecccCCCccccccc
Confidence 788888 443 445554 4 7888999999999998876653 7899998643211100000 00
Q ss_pred CC-----CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC----CeEEeecccce
Q 004456 231 ED-----IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----PEILHKLDLRF 301 (752)
Q Consensus 231 ~~-----~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~l~~~~~~~ 301 (752)
.. ....+ .....+..++|+|||+. |+..+ ..+.|.+||+. .+.. ...+......+
T Consensus 191 ~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~------------~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 191 SRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAG------------HDSSVTIAYPS--APEQPPRALITVKLSQLPL 254 (377)
T ss_dssp SCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEE------------TTTEEC-CEEC--STTSCEEECCCEECSSSCE
T ss_pred cccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEe------------CCCcEEEEECC--CCCCcceeeEeecCCCCce
Confidence 00 00011 22334678999999997 66654 34478888883 2233 34455566678
Q ss_pred eeeeeecCCceEEEee
Q 004456 302 RSVSWCDDSLALVNET 317 (752)
Q Consensus 302 ~~~~~spDg~~l~~~~ 317 (752)
..++|+|||+.|+...
T Consensus 255 ~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 255 RSLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEEEETTEEEEEES
T ss_pred EEEEEcCCCCEEEEEc
Confidence 8999999999887654
No 338
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.33 E-value=5.4e-11 Score=115.64 Aligned_cols=152 Identities=15% Similarity=0.106 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEccCCCCCCCCc---cC--cccc
Q 004456 580 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTP---FG--FQTE 649 (752)
Q Consensus 580 ~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-----~~~~~v~~~~~~~~~~~~---~~--~~~~ 649 (752)
....+++.++++++.++.. .+++.++||||||.+++.++.++|+ +++..|++++..+-.... .. ....
T Consensus 77 ~~~~~~l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 154 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDK 154 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcc
Confidence 4557788888999987643 3689999999999999999998763 789999998765432100 00 0000
Q ss_pred ccchhhhHHHHHhc-ChhhhcCCCCCCEEEEEeC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCC--CCccC
Q 004456 650 FRTLWEATNVYIEM-SPITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHVY 720 (752)
Q Consensus 650 ~~~~~~~~~~~~~~-~~~~~~~~~~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~ 720 (752)
...+......|... .....+++.++|+|.|+|+ .|..|| ...++.+...++......+.+.++| +.|..
T Consensus 155 ~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~ 232 (249)
T 3fle_A 155 QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQ 232 (249)
T ss_dssp TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGG
T ss_pred cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchhc
Confidence 11111111222221 1122344457899999998 699999 8888887777776666667777766 78986
Q ss_pred CccccHHHHHHHHHHHH
Q 004456 721 AARENVMHVIWETDRWL 737 (752)
Q Consensus 721 ~~~~~~~~~~~~~~~fl 737 (752)
.. + ..++.+.|.+||
T Consensus 233 l~-~-n~~V~~~I~~FL 247 (249)
T 3fle_A 233 LH-E-NKDVANEIIQFL 247 (249)
T ss_dssp GG-G-CHHHHHHHHHHH
T ss_pred cc-c-CHHHHHHHHHHh
Confidence 53 3 347788888887
No 339
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.33 E-value=3.1e-11 Score=119.07 Aligned_cols=153 Identities=16% Similarity=0.074 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEccCCCCCCCCc--------c
Q 004456 578 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTP--------F 644 (752)
Q Consensus 578 ~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~-----~~~~~v~~~~~~~~~~~~--------~ 644 (752)
......+++.++++.+.+...+ +++.++||||||.+++.++.++|+ +++++|++++..+..... .
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~ 149 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFK 149 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccc
Confidence 3566778888888888776433 689999999999999999999988 899999999876532110 0
Q ss_pred CccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCC--C
Q 004456 645 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--E 716 (752)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~ 716 (752)
+.+.. ......+... ...+.. ++|+|.|+|. .|.+|| +..++.+...+......++.+.+.+ +
T Consensus 150 ~~p~~----~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a 220 (254)
T 3ds8_A 150 KLPNS----TPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDA 220 (254)
T ss_dssp SCSSC----CHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGG
T ss_pred cCCcc----hHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCC
Confidence 01100 0111111110 112222 6899999999 999999 8888777666655444566666766 6
Q ss_pred CccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 717 HHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 717 ~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
+|... .++. ++.+.+..||++....
T Consensus 221 ~Hs~l-~~~~-~v~~~i~~fL~~~~~~ 245 (254)
T 3ds8_A 221 VHQTL-HETP-KSIEKTYWFLEKFKTD 245 (254)
T ss_dssp CGGGG-GGSH-HHHHHHHHHHHTCCCS
T ss_pred chhcc-cCCH-HHHHHHHHHHHHhcCC
Confidence 68754 3333 5888899999887543
No 340
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.32 E-value=2.5e-10 Score=118.09 Aligned_cols=205 Identities=9% Similarity=0.057 Sum_probs=120.2
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-----eeccCCCCccccccccceEEec--CCcEEEEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-----KPLFESPDICLNAVFGSFVWVN--NSTLLIFT 104 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-----~~lt~~~~~~~~~~~~~~~wsp--dg~~l~~~ 104 (752)
.+...+|||||++||... ....|.++++.++.. ..+..+.. .+..+.|+| |++.|+..
T Consensus 13 ~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCS----------SDQHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred ceeEEEEcCCCCEEEEee----------CCCeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 488899999999998863 336788888876532 12222222 467889999 68888876
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC----------ccccCC
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----------AKDFGT 173 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~----------~~~l~~ 173 (752)
+.+ +.|.++++ .++ ...+..
T Consensus 78 ~~d-------------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 78 SYD-------------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp ETT-------------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred cCC-------------------------------------------------CeEEEEecCCCcccccccCcceeeeecc
Confidence 431 46777777 332 223333
Q ss_pred c-cceeccccCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC-CCCCCcccCCccccccceee
Q 004456 174 P-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP-AEDIPVCYNSVREGMRSISW 249 (752)
Q Consensus 174 ~-~~~~~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~w 249 (752)
+ ..+..+.|+|+ |+.|+....+. .+.+||+...+......... ..............+..+.|
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~dg-------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGNDG-------------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTC-------------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCCC-------------cEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 3 77889999999 99998876553 79999987553211100000 00000001122234668999
Q ss_pred eeC---CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE---eecccceeeeeeecCC----ceEEEeeec
Q 004456 250 RAD---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL---HKLDLRFRSVSWCDDS----LALVNETWY 319 (752)
Q Consensus 250 spD---G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---~~~~~~~~~~~~spDg----~~l~~~~~~ 319 (752)
+|+ ++. ++... ..+.+..++. ..+....+ ......+..++|+|++ +.|+... .
T Consensus 176 ~p~~~~~~~-l~~~~------------~~~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~-~ 238 (351)
T 3f3f_A 176 CPSRFSPEK-LAVSA------------LEQAIIYQRG---KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC-K 238 (351)
T ss_dssp CCCSSSCCE-EEEEE------------TTEEEEEEEC---TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE-T
T ss_pred ccCCCCCcE-EEEec------------CCCcEEEEcc---CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc-C
Confidence 998 664 44443 2223444343 23333222 2345578899999998 6666655 2
Q ss_pred ccCceeEEEEcCCC
Q 004456 320 KTSQTRTWLVCPGS 333 (752)
Q Consensus 320 ~~~~~~l~~~~~~~ 333 (752)
+ ..|.++++..
T Consensus 239 d---g~i~iwd~~~ 249 (351)
T 3f3f_A 239 D---GRIRIFKITE 249 (351)
T ss_dssp T---SCEEEEEEEE
T ss_pred C---CeEEEEeCCC
Confidence 2 2355555543
No 341
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.32 E-value=3e-10 Score=124.04 Aligned_cols=217 Identities=6% Similarity=0.022 Sum_probs=134.9
Q ss_pred CcceeEEeecCCCCCCCCce-----eecCCCCCceeceeEecCC------CCeEEEeeccccccccccCcceEEEEEccc
Q 004456 3 FFTGIGIHRLLPDDSLGPEK-----EVHGYPDGAKINFVSWSPD------GKRIAFSVRVDEEDNVSSCKLRVWIADAET 71 (752)
Q Consensus 3 ~~~~i~~~~~~~~~~~g~~~-----~i~~~~~~~~~~~~~~SPD------G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~ 71 (752)
+...|.++++.. ++.. .+... ...+...+|+|+ |+.||..+ ..+.|.++++.+
T Consensus 181 ~D~tI~iWd~~~----~~~~~~~~~~l~~~--~~~V~~v~wsp~~~~~~~~~~LAs~s----------~DgtvrlWd~~~ 244 (524)
T 2j04_B 181 HSSCIQIFKMNT----STLHCVKVQTIVHS--FGEVWDLKWHEGCHAPHLVGCLSFVS----------QEGTINFLEIID 244 (524)
T ss_dssp -CEEEEEEEEET----TTCCEEEEEEEEEC--CCSEEEEEECSSCCCSSSSCEEEEEE----------TTSCEEEEECCC
T ss_pred CCceEEEEEccC----CCCCceEEEEEEec--CCcEEEEEECCCCCCCCCCceEEEEe----------cCCeEEEEEcCC
Confidence 445677888866 5431 12211 124788999997 56787753 336788888876
Q ss_pred Ccce------------eccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchh
Q 004456 72 GEAK------------PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (752)
Q Consensus 72 g~~~------------~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (752)
++.. .+..+. ..+..+.|+|++ .|+..+.
T Consensus 245 ~~~~~~~~~~~~~p~~~l~~h~-----~~v~sv~~s~~~-~lasgs~--------------------------------- 285 (524)
T 2j04_B 245 NATDVHVFKMCEKPSLTLSLAD-----SLITTFDFLSPT-TVVCGFK--------------------------------- 285 (524)
T ss_dssp CSSSSSEEECCCSCSEEECCTT-----TCEEEEEESSSS-EEEEEET---------------------------------
T ss_pred CccccccceeecCceEEEEcCC-----CCEEEEEecCCC-eEEEEeC---------------------------------
Confidence 6422 111111 146788999875 5655432
Q ss_pred hccCChhhhhhhhhhcccEEEEEcc-CCC-cc-ccCCc-cceecc--ccCCCC-ceEEEEecccCccccccccCccccEE
Q 004456 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGT-AK-DFGTP-AVYTAV--EPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQ 212 (752)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~-~l~~~-~~~~~~--~~SpDG-k~l~~~~~~~~~~~~~~~~~~~~~l~ 212 (752)
.+.|.++|+ ++. .. .+..+ ..+..+ .|+||| +.|+..+.+ ..+.
T Consensus 286 ----------------DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------------~tvk 336 (524)
T 2j04_B 286 ----------------NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------------GYFY 336 (524)
T ss_dssp ----------------TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------------SEEE
T ss_pred ----------------CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------------CeEE
Confidence 168999999 452 22 23334 677777 689999 666666555 3899
Q ss_pred EEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC
Q 004456 213 VWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP 291 (752)
Q Consensus 213 ~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 291 (752)
+||+.+.+.. .+...... ..+..++|+|||+. ++..+ ..+.+.++|+. .+...
T Consensus 337 lWD~~~~~~~~~~~~~~~~-----------~~v~~v~fsp~~~~-l~s~~------------~d~tv~lwd~~--~~~~~ 390 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRG-----------SNLVPVVYCPQIYS-YIYSD------------GASSLRAVPSR--AAFAV 390 (524)
T ss_dssp EECGGGHHHHCEEEEECSC-----------CSCCCEEEETTTTE-EEEEC------------SSSEEEEEETT--CTTCC
T ss_pred EEECCCCCccccccccccc-----------CcccceEeCCCcCe-EEEeC------------CCCcEEEEECc--ccccc
Confidence 9998765321 11111000 01457899999986 44332 23368888873 33445
Q ss_pred eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 292 EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 292 ~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
..+......+..++|||||+.|+.++ ....|.++++..
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs----~Dgtv~lwd~~~ 428 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHPMVLAGS----ADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSCEEEEECCSSCCBCEEEE----TTTEEECCBSCS
T ss_pred eeeecCCCceEEEEeCCCCCeEEEEE----CCCEEEEEechH
Confidence 66777778899999999999888776 233577777654
No 342
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.32 E-value=4.9e-10 Score=114.55 Aligned_cols=255 Identities=11% Similarity=0.068 Sum_probs=156.9
Q ss_pred ceeEEeecCCCCCCCCceeecCCC-CCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
+.|.++++.. |+..++..+. ....+...+|+|||++||..+ ....|.++++++++..+......
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs----------~Dg~v~iw~~~~~~~~~~~~~h~- 109 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----------SSAEVQLWDVQQQKRLRNMTSHS- 109 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE----------CCCcEEEeecCCceeEEEecCcc-
Confidence 5688899877 7765543222 233688999999999998863 34688999999887544332221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.....++++++.|+..+.. ..+..++
T Consensus 110 -----~~~~~~~~~~~~l~s~~~~-------------------------------------------------~~~~~~~ 135 (318)
T 4ggc_A 110 -----ARVGSLSWNSYILSSGSRS-------------------------------------------------GHIHHHD 135 (318)
T ss_dssp -----SCEEEEEEETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred -----ceEEEeecCCCEEEEEecC-------------------------------------------------CceEeee
Confidence 2234677888877655321 3444455
Q ss_pred c-CC--CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 164 L-DG--TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 164 ~-~G--~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
. .+ ....+..+ .......|+++|+.|+....+. .+.+||+.+++........ ...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-------------~i~iwd~~~~~~~~~~~~~--------~~~ 194 (318)
T 4ggc_A 136 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPLQT--------FTQ 194 (318)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCBTTBSCCSEE--------ECC
T ss_pred cCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-------------ceeEEECCCCcccccceee--------ecc
Confidence 4 22 22233333 6777899999999998776553 7899998765321110000 001
Q ss_pred ccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeec
Q 004456 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~ 319 (752)
....+..+.|+|++.. ++..... .....+.+++. ..............+....|+|+++.++..+..
T Consensus 195 ~~~~v~~~~~~~~~~~-~~~~~~~---------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSN-VLATGGG---------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp CCSCEEEEEECTTSTT-EEEEEEC---------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceEEEEecCCCCc-EEEEEec---------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEc
Confidence 1122567899999988 5544321 13336778887 444444455566677888999999998886532
Q ss_pred ccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 320 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 320 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
. ...|+++++.++ +........... .-.++|||||++|+..+.
T Consensus 262 ~--d~~i~iwd~~~~--~~~~~l~gH~~~------V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 262 A--QNQLVIWKYPTM--AKVAELKGHTSR------VLSLTMSPDGATVASAAA 304 (318)
T ss_dssp T--TCCEEEEETTTC--CEEEEECCCSSC------EEEEEECTTSSCEEEEET
T ss_pred C--CCEEEEEECCCC--cEEEEEcCCCCC------EEEEEEcCCCCEEEEEec
Confidence 2 345888888774 322222211111 112679999999987763
No 343
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.32 E-value=3.8e-10 Score=114.43 Aligned_cols=228 Identities=14% Similarity=0.112 Sum_probs=134.6
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc---eeccCCCCccccccccceEEecC--CcEEEEEec
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~---~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~ 106 (752)
.+...+|||||++||..+ ....|.+++++++.. ..+..+.. .+..+.|+|+ |+.|+..+.
T Consensus 11 ~V~~~~~s~~g~~las~s----------~D~~v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS----------SDKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSCEEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEe----------CCCEEEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEEcC
Confidence 478899999999999864 346788888775432 33332222 4678899864 787776532
Q ss_pred CCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc---ccCCc-cceeccc
Q 004456 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTP-AVYTAVE 181 (752)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~---~l~~~-~~~~~~~ 181 (752)
+ +.|.+|++ +|+.. .+..+ ..+..++
T Consensus 76 D-------------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 76 D-------------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp T-------------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred C-------------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 1 57888888 55322 23333 6788999
Q ss_pred cCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCC------
Q 004456 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK------ 253 (752)
Q Consensus 182 ~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG------ 253 (752)
|+|+ |+.|+..+.+. .+.+|++........ ..+......+..++|+|++
T Consensus 107 ~~p~~~g~~l~s~s~d~-------------~v~~wd~~~~~~~~~----------~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSDG-------------KVSVVEFKENGTTSP----------IIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp ECCGGGCSEEEEEETTS-------------EEEEEEBCSSSCBCC----------EEEECCSSCEEEEEECCCC------
T ss_pred eCcCCCCcEEEEEECCC-------------cEEEEEecCCCceee----------eeeecccCccceEeecCCccccccc
Confidence 9998 88888776553 789999875421100 0011122336678999974
Q ss_pred -------CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-----eEEeecccceeeeeeecCC---ceEEEeee
Q 004456 254 -------PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDS---LALVNETW 318 (752)
Q Consensus 254 -------~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~spDg---~~l~~~~~ 318 (752)
+. |+..+ ..+.+.+||+ ..+.. ..+......+..++|+|++ +.|+..+
T Consensus 164 ~~~~~~~~~-l~sgs------------~D~~v~lwd~---~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s- 226 (297)
T 2pm7_B 164 HNGTKESRK-FVTGG------------ADNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS- 226 (297)
T ss_dssp ------CCE-EEEEE------------TTSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-
T ss_pred CCCCCCcce-EEEEc------------CCCcEEEEEE---cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE-
Confidence 33 33332 2346777777 22221 2233445678999999995 6666655
Q ss_pred cccCceeEEEEcCCCCCcc--ceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 319 YKTSQTRTWLVCPGSKDVA--PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.+ + .|.++++...... ...+....... ..-.++|+|||++|+...
T Consensus 227 ~D-~--~v~iWd~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 227 QD-R--TCIIWTQDNEQGPWKKTLLKEEKFPD-----VLWRASWSLSGNVLALSG 273 (297)
T ss_dssp TT-S--CEEEEEESSTTSCCEEEESSSSCCSS-----CEEEEEECSSSCCEEEEE
T ss_pred CC-C--cEEEEEeCCCCCccceeeeecccCCC-----cEEEEEECCCCCEEEEEc
Confidence 22 2 3555555442111 11221111100 111267999999998876
No 344
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.32 E-value=1.5e-11 Score=124.84 Aligned_cols=201 Identities=16% Similarity=0.084 Sum_probs=115.7
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~ 591 (752)
..|.||++||.+... ++ ..+..+...| ..+|.|++ .+.+|+|.+...........+++.+
T Consensus 66 ~~~~lvllhG~~~~~---------~~----~~~~~~~~~l-~~~~~v~~---~d~~G~G~s~~~~~~~~~~a~~~~~--- 125 (300)
T 1kez_A 66 GEVTVICCAGTAAIS---------GP----HEFTRLAGAL-RGIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQAD--- 125 (300)
T ss_dssp CSSEEEECCCSSTTC---------ST----TTTHHHHHHT-SSSCCBCC---CCCTTSSTTCCBCSSHHHHHHHHHH---
T ss_pred CCCeEEEECCCcccC---------cH----HHHHHHHHhc-CCCceEEE---ecCCCCCCCCCCCCCHHHHHHHHHH---
Confidence 368999999964210 00 1111233333 45699988 5566777664443344555555443
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCCCCCCCCcc---------C-cccc--ccch--h
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTPF---------G-FQTE--FRTL--W 654 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p---~~~~~~v~~~~~~~~~~~~~---------~-~~~~--~~~~--~ 654 (752)
.+.+. .+..++.|+||||||.+++.++.+.| ++++++|++++......... . +... .... .
T Consensus 126 ~l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
T 1kez_A 126 AVIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRL 203 (300)
T ss_dssp HHHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHH
T ss_pred HHHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHH
Confidence 33332 23468999999999999999999987 48999999887643211000 0 0000 0000 0
Q ss_pred hhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEeCCCCccCCccccHHHHHHHH
Q 004456 655 EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWET 733 (752)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 733 (752)
.....+...........+++|+|+++|+ |..++ +.. .. +.. .....+++++++ +|.....+.+..+.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i 274 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHI 274 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHH
Confidence 0011111111111236788999999995 55665 332 11 222 223468999999 89876446778899999
Q ss_pred HHHHHHHhcC
Q 004456 734 DRWLQKYCLS 743 (752)
Q Consensus 734 ~~fl~~~l~~ 743 (752)
.+||.+....
T Consensus 275 ~~fl~~~~~~ 284 (300)
T 1kez_A 275 DAWLGGGNSS 284 (300)
T ss_dssp HHHHTCC---
T ss_pred HHHHHhccCC
Confidence 9999876543
No 345
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=2.9e-09 Score=111.09 Aligned_cols=307 Identities=10% Similarity=0.013 Sum_probs=156.3
Q ss_pred EecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCc
Q 004456 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (752)
Q Consensus 37 ~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~ 116 (752)
..+|||++ +|+.... ..+....|+++|.++++...-..... .. .+.+||||++||++........
T Consensus 27 ~~~~~~~~-~yv~~~~----~~~~~~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spDg~~lyv~n~~~~~~~---- 91 (373)
T 2mad_H 27 APGADGRR-SYINLPA----HHSAIIQQWVLDAGSGSILGHVNGGF-----LP-NPVAAHSGSEFALASTSFSRIA---- 91 (373)
T ss_pred cCCCCCCE-EEEeCCc----ccCCccEEEEEECCCCeEEEEecCCC-----CC-CeEECCCCCEEEEEeccccccc----
Confidence 34589965 5665410 00111188999998887543221111 12 7899999999998732100000
Q ss_pred cCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCC--------ccceeccccCCCC
Q 004456 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT--------PAVYTAVEPSPDQ 186 (752)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~--------~~~~~~~~~SpDG 186 (752)
+ ......|.++|+ +++. ..+.. ......+.|||||
T Consensus 92 -------------------r----------------g~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG 136 (373)
T 2mad_H 92 -------------------K----------------GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN 136 (373)
T ss_pred -------------------c----------------CCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC
Confidence 0 001145777777 4432 22211 1234588999999
Q ss_pred ceEEEEecccCccccccccCccccEEEEecCCceeEEe-cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 187 k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
|+|++...... ..|.++| .+++.... ...+. .+.+.|+|+. .++...
T Consensus 137 ~~l~v~n~~~~-----------~~v~viD-~t~~~~~~~i~~~~----------------~~~~~~~~~~-~~~~~~--- 184 (373)
T 2mad_H 137 ADLLFFQFAAG-----------PAVGLVV-QGGSSDDQLLSSPT----------------CYHIHPGAPS-TFYLLC--- 184 (373)
T ss_pred CEEEEEecCCC-----------CeEEEEE-CCCCEEeEEcCCCc----------------eEEEEeCCCc-eEEEEc---
Confidence 99999854311 3689999 87765433 32221 1345566665 433321
Q ss_pred CCCccccCccceEEeccCCCCCCCCCeEE------eecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccce
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGEKPEIL------HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (752)
..+.+.+++. .+...... .........+.+++++..++|.. ....++++|+.+. ...
T Consensus 185 --------~dg~~~~vd~---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~v~vid~~~~--~~~ 247 (373)
T 2mad_H 185 --------AQGGLAKTDH---AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV----YSGKILQADISAA--GAT 247 (373)
T ss_pred --------CCCCEEEEEC---CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc----CCceEEEEeccCC--cce
Confidence 1223334443 11111111 11111123456788888888766 2336999999763 222
Q ss_pred eccccccccc--cC---CCCC-CceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeec
Q 004456 340 VLFDRVFENV--YS---DPGS-PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 340 ~l~~~~~~~~--~~---~~~~-p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
.+........ .. .+.. -.+.+++||+.|+..... ....+.......|+++|+++++..+-...
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~-----------~~~~~~~~~~~~V~VID~~t~~vv~~i~~ 316 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE-----------QSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEecc-----------CCcccccCCCCeEEEEECCCCEEEEEEEC
Confidence 2221111000 00 0000 012345555554443311 00000011234699999999887433322
Q ss_pred cchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEe
Q 004456 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (752)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~l 467 (752)
.. ....++|||||++++|+.... ...|+++|..+++....
T Consensus 317 g~------------~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 317 GH------------DVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CC------------CcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCCCEEee
Confidence 21 122358999999777765421 35799999998886654
No 346
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.32 E-value=1e-09 Score=114.38 Aligned_cols=280 Identities=15% Similarity=0.078 Sum_probs=143.9
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCCCCcc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDIC 84 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~~~~~ 84 (752)
.|++++... ++.... ++.+... ...|||||++|+.+..........+....|.++|+++++... +.-.....
T Consensus 32 ~v~v~D~~t----~~~~~~--i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 32 RVHVYDYTN----GKFLGM--VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp EEEEEETTT----CCEEEE--EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred eEEEEECCC----CeEEEE--ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 566676655 554322 3444444 889999999987654210000011224569999988776533 32111100
Q ss_pred -ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 85 -LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 85 -~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.......+.+||||++|+.+... ....|.++|
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~-----------------------------------------------~~~~v~v~d 137 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNAS-----------------------------------------------PATSIGIVD 137 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEES-----------------------------------------------SSEEEEEEE
T ss_pred ccCCCcceEEECCCCCEEEEECCC-----------------------------------------------CCCeEEEEE
Confidence 00124578999999999876321 015688888
Q ss_pred c-CCCc-cc-cCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC-ceeE-EecCCCCCCCCCcccC
Q 004456 164 L-DGTA-KD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVR-ELCDLPPAEDIPVCYN 238 (752)
Q Consensus 164 ~-~G~~-~~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~-~l~~~~~~~~~~~~~~ 238 (752)
+ +++. .. +. ......+.+.|+|+..++..... +.+..++.+. ++.. ........
T Consensus 138 ~~~~~~~~~~i~-~~~~~~v~~~p~~~~~~~~~~~d------------g~~~~v~~~~~g~~~~~~~~~~~~-------- 196 (361)
T 2oiz_A 138 VAKGDYVEDVTA-AAGCWSVIPQPNRPRSFMTICGD------------GGLLTINLGEDGKVASQSRSKQMF-------- 196 (361)
T ss_dssp TTTTEEEEEEGG-GTTEEEEEECTTSSSEEEEEETT------------SSEEEEEECTTSSEEEEEECCCCS--------
T ss_pred CCCCcEEEEEec-CCCcceeEEcCCCCeeEEEECCC------------CcEEEEEECCCCcEeeeccccceE--------
Confidence 8 5533 22 22 12222234566664433332221 1333343322 2111 11100000
Q ss_pred CccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-------------ccceeeee
Q 004456 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-------------DLRFRSVS 305 (752)
Q Consensus 239 ~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~ 305 (752)
........+..+|||+. +++.+ ..+.++++|. .+.....+... ......++
T Consensus 197 ~~~~~~~~~~~~~~g~~-~~~~~------------~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDK-AHFVS------------YYGNVYSADF---SGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp CTTTSCBCSCCEECSSE-EEEEB------------TTSEEEEEEC---SSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred cCCCCceEEEecccCCE-EEEEe------------CCCeEEEEEe---cCCCceecccccccCccccccccccCCeeEEE
Confidence 00011234566899987 66664 2336888887 33333322210 01112368
Q ss_pred eecCCceEEEeeeccc-------CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcc
Q 004456 306 WCDDSLALVNETWYKT-------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 378 (752)
Q Consensus 306 ~spDg~~l~~~~~~~~-------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~ 378 (752)
++||++.++.....+. ....|+++|+++.+ ....+...... .+++||||++|+....
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~p~---------~ia~spdg~~l~v~n~------ 324 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRDAL---------SMTIDQQRNLMLTLDG------ 324 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTTCC---------EEEEETTTTEEEEECS------
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCCee---------EEEECCCCCEEEEeCC------
Confidence 9999988776542111 23579999998852 11222211111 2779999997765531
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCcee
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKE 408 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 408 (752)
..|.+||.++++++
T Consensus 325 ----------------~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 325 ----------------GNVNVYDISQPEPK 338 (361)
T ss_dssp ----------------SCEEEEECSSSSCE
T ss_pred ----------------CeEEEEECCCCcce
Confidence 35999999999333
No 347
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.30 E-value=7.9e-10 Score=114.23 Aligned_cols=272 Identities=13% Similarity=0.083 Sum_probs=157.2
Q ss_pred cceeEEeecCCCCCC-C-CceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCC
Q 004456 4 FTGIGIHRLLPDDSL-G-PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~-g-~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~ 81 (752)
...|.++++...... + ..+.+.+. ...+....|||||++|+... ....|.+++...+.........
T Consensus 60 D~~i~vWd~~~~~~~~~~~~~~l~~h--~~~V~~~~~s~dg~~l~s~~----------~d~~i~~~~~~~~~~~~~~~~~ 127 (340)
T 4aow_A 60 DKTIIMWKLTRDETNYGIPQRALRGH--SHFVSDVVISSDGQFALSGS----------WDGTLRLWDLTTGTTTRRFVGH 127 (340)
T ss_dssp TSCEEEEEECCSSSCSEEEEEEECCC--SSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECC
T ss_pred CCeEEEEECCCCCcccceeeEEEeCC--CCCEEEEEECCCCCEEEEEc----------ccccceEEeecccceeeeecCC
Confidence 355778887652110 0 11222222 23588899999999998863 3367888887776654443222
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 82 ~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.. ......|+|+++.|+..+.+ +.+.+
T Consensus 128 ~~----~~~~~~~~~~~~~l~s~s~d-------------------------------------------------~~~~~ 154 (340)
T 4aow_A 128 TK----DVLSVAFSSDNRQIVSGSRD-------------------------------------------------KTIKL 154 (340)
T ss_dssp SS----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEEE
T ss_pred CC----ceeEEEEeecCccceeecCC-------------------------------------------------CeEEE
Confidence 21 24466889999988765321 45677
Q ss_pred EccCC--Ccc-ccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCccc
Q 004456 162 GSLDG--TAK-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (752)
Q Consensus 162 ~~~~G--~~~-~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (752)
+++.+ ... ....+ ..+..+.|++++...++.+...+ ..+.+||+.+.+........
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d-----------~~i~i~d~~~~~~~~~~~~h--------- 214 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD-----------KLVKVWNLANCKLKTNHIGH--------- 214 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT-----------SCEEEEETTTTEEEEEECCC---------
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC-----------CEEEEEECCCCceeeEecCC---------
Confidence 77743 211 22222 66778889998765443332211 37899999877654432221
Q ss_pred CCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEee
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 317 (752)
...+..++|+|||+. |+..+ ..+.+.+||+ ..............+..+.|+|++..++...
T Consensus 215 ---~~~v~~~~~s~~~~~-l~s~s------------~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 215 ---TGYLNTVTVSPDGSL-CASGG------------KDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp ---SSCEEEEEECTTSSE-EEEEE------------TTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred ---CCcEEEEEECCCCCE-EEEEe------------CCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccC
Confidence 122678999999996 55443 3347888888 3333333344556678889999987655443
Q ss_pred ecccCceeEEEEcCCCCCccceeccccccccccC--CCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCC
Q 004456 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS--DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (752)
Q Consensus 318 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (752)
...|.++++.+.. ....+.......... ....-.++|+|||++|+..+.+ |
T Consensus 276 -----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-------------g-------- 328 (340)
T 4aow_A 276 -----GPSIKIWDLEGKI-IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD-------------N-------- 328 (340)
T ss_dssp -----TTEEEEEETTTTE-EEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT-------------S--------
T ss_pred -----CCEEEEEECCCCe-EEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC-------------C--------
Confidence 2357788877641 111111100000000 0011236799999998877632 2
Q ss_pred eeEEEecCCCc
Q 004456 396 FLDLFDINTGS 406 (752)
Q Consensus 396 ~l~~~d~~~g~ 406 (752)
.|.+||+++|+
T Consensus 329 ~v~iW~~~tGt 339 (340)
T 4aow_A 329 LVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEEEC--
T ss_pred EEEEEeCCCcC
Confidence 48999998885
No 348
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=2.7e-10 Score=119.73 Aligned_cols=227 Identities=10% Similarity=0.040 Sum_probs=132.1
Q ss_pred cEEEEEccC-C--C-ccccCCc-cceeccccCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC
Q 004456 157 AQLVLGSLD-G--T-AKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (752)
Q Consensus 157 ~~i~~~~~~-G--~-~~~l~~~-~~~~~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (752)
+.|.++++. + + ...+..+ ..+..++|+|+ |+.|+..+.+. .|.+||+.+++...+.....
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-------------~v~iwd~~~~~~~~~~~~~~ 99 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-------------KVLIWKEENGRWSQIAVHAV 99 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-------------CEEEEEEETTEEEEEEEECC
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC-------------EEEEEEcCCCceeEeeeecC
Confidence 467777773 2 2 2334444 78889999988 88888776553 79999998875322221111
Q ss_pred CCCCCcccCCccccccceeeeeC--CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeee
Q 004456 230 AEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspD--G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 307 (752)
....+..+.|+|+ |+. |+... ..+.+.++++..........+......+..++|+
T Consensus 100 ----------~~~~v~~~~~~~~~~~~~-l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 100 ----------HSASVNSVQWAPHEYGPL-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp ----------CSSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC
T ss_pred ----------CCcceEEEEeCCCCCCCE-EEEec------------CCCcEEEEecCCCCceeeEEecCCCCceEEEEEc
Confidence 1123678999999 875 55553 3447888888311111222344556678899999
Q ss_pred c-------------CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCC---CCeEEEee
Q 004456 308 D-------------DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST---GTNVIAKI 371 (752)
Q Consensus 308 p-------------Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~d---g~~l~~~~ 371 (752)
| |++.|+.... ...|.++++.++......+.....+. ...-.++|+|+ +++|+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~h~----~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CCC----------CTTCEEEEEET----TSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEE
T ss_pred CccccccccccCCCCCCEEEEEeC----CCeEEEEEecCCCcceeeEEEEeccc----CcEeEEEECCCCCCCCeEEEEe
Confidence 9 6888888762 23477777665311111111111110 01113679999 78887776
Q ss_pred eecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc---eeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecC
Q 004456 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 448 (752)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~ 448 (752)
.+ | .|.+||+.+++ ...+...... ......++|+|||+.|+....+
T Consensus 229 ~d-------------g--------~i~iwd~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~g~~l~~~~~d- 277 (379)
T 3jrp_A 229 QD-------------R--------TCIIWTQDNEQGPWKKTLLKEEKF---------PDVLWRASWSLSGNVLALSGGD- 277 (379)
T ss_dssp TT-------------S--------CEEEEEESSTTSCCEEEESSSSCC---------SSCEEEEEECSSSCCEEEEESS-
T ss_pred CC-------------C--------EEEEEeCCCCCccceeeeeccccC---------CCcEEEEEEcCCCCEEEEecCC-
Confidence 32 1 48889988764 2222211100 0111235899999988776542
Q ss_pred CCCcEEEEEECCC
Q 004456 449 TEITQYHILSWPL 461 (752)
Q Consensus 449 ~~~~~i~~~d~~~ 461 (752)
..|++|++..
T Consensus 278 ---g~i~iw~~~~ 287 (379)
T 3jrp_A 278 ---NKVTLWKENL 287 (379)
T ss_dssp ---SSEEEEEEEE
T ss_pred ---CcEEEEeCCC
Confidence 3377777553
No 349
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.30 E-value=3.7e-09 Score=116.11 Aligned_cols=325 Identities=10% Similarity=-0.021 Sum_probs=178.6
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcc--cCcc-eeccCCCC
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEA-KPLFESPD 82 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~--~g~~-~~lt~~~~ 82 (752)
.|.++++.. ++.... ++.+.....+.+||||++++... ....|.++|+. +++. .++.. ..
T Consensus 178 ~V~viD~~t----~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~----------~dg~V~viD~~~~t~~~v~~i~~-G~ 240 (567)
T 1qks_A 178 QIALIDGST----YEIKTV--LDTGYAVHISRLSASGRYLFVIG----------RDGKVNMIDLWMKEPTTVAEIKI-GS 240 (567)
T ss_dssp EEEEEETTT----CCEEEE--EECSSCEEEEEECTTSCEEEEEE----------TTSEEEEEETTSSSCCEEEEEEC-CS
T ss_pred eEEEEECCC----CeEEEE--EeCCCCccceEECCCCCEEEEEc----------CCCeEEEEECCCCCCcEeEEEec-CC
Confidence 456666655 543322 23444567899999999876532 23589999985 4442 33321 11
Q ss_pred ccccccccceEEe----cCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 83 ICLNAVFGSFVWV----NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 83 ~~~~~~~~~~~ws----pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
....+.+| |||++++..... ..+
T Consensus 241 -----~P~~ia~s~~~~pDGk~l~v~n~~------------------------------------------------~~~ 267 (567)
T 1qks_A 241 -----EARSIETSKMEGWEDKYAIAGAYW------------------------------------------------PPQ 267 (567)
T ss_dssp -----EEEEEEECCSTTCTTTEEEEEEEE------------------------------------------------TTE
T ss_pred -----CCceeEEccccCCCCCEEEEEEcc------------------------------------------------CCe
Confidence 24578999 799999876331 145
Q ss_pred EEEEcc-CCCccc-cCCc------------cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEe
Q 004456 159 LVLGSL-DGTAKD-FGTP------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (752)
Q Consensus 159 i~~~~~-~G~~~~-l~~~------------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (752)
+.++|. +.+..+ +... ..+..+..|+++..+++..... ++|+++|........+
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~------------g~v~~vd~~~~~~~~v 335 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET------------GKILLVDYTDLNNLKT 335 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT------------TEEEEEETTCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC------------CeEEEEecCCCcccee
Confidence 666665 333222 1111 1345677888887777665432 4788888765432222
Q ss_pred cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-ccce--
Q 004456 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRF-- 301 (752)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~-- 301 (752)
+..... ....++.|+|||++ ++.++. ..+.|.++|+ ++++....... ....
T Consensus 336 ~~i~~~-----------~~~~d~~~~pdgr~-~~va~~-----------~sn~V~ViD~---~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 336 TEISAE-----------RFLHDGGLDGSHRY-FITAAN-----------ARNKLVVIDT---KEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EEEECC-----------SSEEEEEECTTSCE-EEEEEG-----------GGTEEEEEET---TTTEEEEEEECSSSSBCC
T ss_pred eeeecc-----------ccccCceECCCCCE-EEEEeC-----------CCCeEEEEEC---CCCcEEEEEeccCcCCCC
Confidence 221111 11446799999997 555542 3457888998 44443333332 1111
Q ss_pred -eeee-eecCCceEEEeeecccCceeEEEEcCCCCCcc---ceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCC
Q 004456 302 -RSVS-WCDDSLALVNETWYKTSQTRTWLVCPGSKDVA---PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (752)
Q Consensus 302 -~~~~-~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~ 376 (752)
+.+. ++|++..++++.... ...|.+++.+..... .+.+....... .+...+..+|||++|++...-.
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~~~~~~~~~kvv~~i~~~g----~g~~~i~~~p~~~~l~v~~~~~-- 461 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMG--DDSVALIGTDPEGHPDNAWKILDSFPALG----GGSLFIKTHPNSQYLYVDATLN-- 461 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCSEEEEECTTC--
T ss_pred ccceeeECCCCCcEEEeCCCC--CCeEEEecCCCCCCccccCEEEEEEecCC----CCCEEEEeCCCCCeEEEecCCC--
Confidence 2233 478877776554322 235888887752110 11221111110 1222345799999988765110
Q ss_pred cceEEEEccCCCCCCC-CCCeeEEEecCCCce-------eEEeeccch---hhhhceeeeecCCcceecccCCCEEEEEE
Q 004456 377 EQIYILLNGRGFTPEG-NIPFLDLFDINTGSK-------ERIWESNRE---KYFETAVALVFGQGEEDINLNQLKILTSK 445 (752)
Q Consensus 377 ~~~~~~~~~~g~~~~~-~~~~l~~~d~~~g~~-------~~l~~~~~~---~~~~~~~~~~~~~~~~~~s~d~~~l~~~~ 445 (752)
++. ....|.++|+++.+. +.|...+.. .-...+.+ +.+++||++++++.
T Consensus 462 -------------~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~G~~~~~s~ 521 (567)
T 1qks_A 462 -------------PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQ-------GEFNKDGTEVWFSV 521 (567)
T ss_dssp -------------SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEE-------EEECTTSSEEEEEE
T ss_pred -------------CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEe-------eeECCCCCEEEEEe
Confidence 000 022588999876621 233211000 00012333 48999999999886
Q ss_pred ecC-CCCcEEEEEECCCCCeeE
Q 004456 446 ESK-TEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 446 ~~~-~~~~~i~~~d~~~g~~~~ 466 (752)
.+. .....|.++|..+++++.
T Consensus 522 ~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 522 WNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp ECCTTSCCEEEEEETTTTEEEE
T ss_pred ecCCCCCCcEEEEECCCceEEE
Confidence 543 356789999988887654
No 350
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.5e-09 Score=127.18 Aligned_cols=140 Identities=9% Similarity=0.029 Sum_probs=87.2
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccC----
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE---- 79 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~---- 79 (752)
...|.++++.. ++....... ...+...+|+|||++||... ..+.|.++++++++...+..
T Consensus 78 D~~v~lWd~~~----~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs----------~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 78 KDTVYVLSLYS----QKVLTTVFV--PGKITSIDTDASLDWMLIGL----------QNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp TCEEEEEETTT----CSEEEEEEC--SSCEEEEECCTTCSEEEEEE----------TTSCEEEEETTTTEEEEEEECCHH
T ss_pred cCeEEEEECCC----CcEEEEEcC--CCCEEEEEECCCCCEEEEEc----------CCCcEEEEECCCCccccceecccc
Confidence 35677888866 543322212 23588899999999998863 34688999998876431110
Q ss_pred ---CCCccccccccceEEecCC-cEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhc
Q 004456 80 ---SPDICLNAVFGSFVWVNNS-TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (752)
Q Consensus 80 ---~~~~~~~~~~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (752)
.........+..++|+|++ ..|+..+.
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~------------------------------------------------- 172 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYE------------------------------------------------- 172 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECS-------------------------------------------------
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeC-------------------------------------------------
Confidence 0000011246789999975 45554321
Q ss_pred ccEEEEEcc-CCCc-cccC------------------Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEE
Q 004456 156 TAQLVLGSL-DGTA-KDFG------------------TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (752)
Q Consensus 156 ~~~i~~~~~-~G~~-~~l~------------------~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (752)
.+.| +||+ +++. ..+. .+ ..+..++|||||++|+..+.+. .|.+|
T Consensus 173 dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-------------~i~lW 238 (902)
T 2oaj_A 173 YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-------------SLVFW 238 (902)
T ss_dssp SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-------------CEEEE
T ss_pred CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-------------eEEEE
Confidence 1456 6776 4422 2221 11 4578999999999998876663 79999
Q ss_pred ecCCceeE
Q 004456 215 TTDGKLVR 222 (752)
Q Consensus 215 d~~~~~~~ 222 (752)
|+.+++..
T Consensus 239 d~~~g~~~ 246 (902)
T 2oaj_A 239 DANSGHMI 246 (902)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcEE
Confidence 99876543
No 351
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.29 E-value=1.6e-10 Score=118.31 Aligned_cols=227 Identities=15% Similarity=0.113 Sum_probs=134.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcce---eccCCCCccccccccceEEec--CCcEEEEEec
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK---PLFESPDICLNAVFGSFVWVN--NSTLLIFTIP 106 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~---~lt~~~~~~~~~~~~~~~wsp--dg~~l~~~~~ 106 (752)
.+...+|||||++||..+ ....|.++++.+++.. .+..+.. .+..+.|+| +++.|+..+.
T Consensus 15 ~V~~v~~s~~g~~lasgs----------~D~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCS----------SDRSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASCSY 79 (316)
T ss_dssp CEEEEEECGGGCEEEEEE----------TTTEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEEET
T ss_pred eEEEeeEcCCCCEEEEEe----------CCCeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEEEC
Confidence 478899999999998864 3467888888776532 2322222 467889986 4787776532
Q ss_pred CCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc---ccCCc-cceeccc
Q 004456 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTP-AVYTAVE 181 (752)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~---~l~~~-~~~~~~~ 181 (752)
+ ..|.+|++ +|+.. .+..+ ..+..++
T Consensus 80 D-------------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 80 D-------------------------------------------------RKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp T-------------------------------------------------SCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred C-------------------------------------------------CEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 1 56888888 55322 23334 6788999
Q ss_pred cCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeeeCC-----
Q 004456 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADK----- 253 (752)
Q Consensus 182 ~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG----- 253 (752)
|+|| |+.|+..+.+. .+.+|++.++.... .... ......+..++|+|++
T Consensus 111 ~~p~~~g~~lasgs~D~-------------~i~lwd~~~~~~~~~~~~~----------~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 111 WAPHDYGLILACGSSDG-------------AISLLTYTGEGQWEVKKIN----------NAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp ECCTTTCSCEEEECSSS-------------CEEEEEECSSSCEEECCBT----------TSSSSCBCCCEECCCCCC---
T ss_pred ECCCCCCcEEEEEcCCC-------------CEEEEecCCCCCcceeeee----------ccccCCcceEEEccccCCccc
Confidence 9998 77887765553 78999987653211 1111 1112235678999984
Q ss_pred ------------CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE---EeecccceeeeeeecCC----ceEE
Q 004456 254 ------------PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDDS----LALV 314 (752)
Q Consensus 254 ------------~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l~~~~~~~~~~~~spDg----~~l~ 314 (752)
+. |+.. ...+.+.+|++. .++.... +......+..++|+|++ +.|+
T Consensus 168 ~~~~~~~~~~~~~~-l~sg------------s~D~~v~lWd~~--~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 168 IDHPSGQKPNYIKR-FASG------------GCDNLIKLWKEE--EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp ---CCSCCCCCCCB-EECC------------BTTSBCCEEEEC--TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred cccccccCccccce-EEEe------------cCCCeEEEEEeC--CCCccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 22 2211 133456777762 1221122 33345568899999997 5666
Q ss_pred EeeecccCceeEEEEcCCCCCc---cceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 315 NETWYKTSQTRTWLVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 315 ~~~~~~~~~~~l~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
..+ ....|.++++.+... ....+.... . ..-.++|+|||++|+...
T Consensus 233 s~s----~D~~v~iw~~~~~~~~~~~~~~~~~~~-~------~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 233 SCS----QDGRVFIWTCDDASSNTWSPKLLHKFN-D------VVWHVSWSITANILAVSG 281 (316)
T ss_dssp EEE----TTCEEEEEECSSTTCCCCBCCEEEECS-S------CEEEEEECTTTCCEEEEE
T ss_pred EEc----CCCeEEEEEccCccccchhhhhhhcCC-C------cEEEEEEcCCCCEEEEEc
Confidence 655 223466776654211 111221111 1 111267999999998876
No 352
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.28 E-value=2.9e-09 Score=111.13 Aligned_cols=283 Identities=9% Similarity=-0.056 Sum_probs=149.9
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCC-Ccc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~-~~~ 84 (752)
.|.+++... ++.. ..++.+... .+.+||||++|+.+........+......|.++|.++.+...-.... ...
T Consensus 48 ~v~v~D~~t----~~~~--~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GSIL--GHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----CeEE--EEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 556777655 5533 234555444 89999999999876431111111123467889998876643321111 000
Q ss_pred c--cccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 85 L--NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 85 ~--~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
. ......+.|||||++|++..... ..+|.++
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~~-----------------------------------------------~~~v~vi 153 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFAA-----------------------------------------------GPAVGLV 153 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecCC-----------------------------------------------CCeEEEE
Confidence 0 00134789999999999873210 1467777
Q ss_pred ccCC-Ccccc-CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeE-EecCCCC-CCCCCcccC
Q 004456 163 SLDG-TAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPP-AEDIPVCYN 238 (752)
Q Consensus 163 ~~~G-~~~~l-~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~-~~~~~~~~~ 238 (752)
| .. +.... ..-... +.+.|+|++.++..... +++..++. +++.. .....+. ....|
T Consensus 154 D-~t~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~d------------g~~~~vd~-~g~~~~~~~~~~~~~~~~p---- 213 (373)
T 2mad_H 154 V-QGGSSDDQLLSSPTC--YHIHPGAPSTFYLLCAQ------------GGLAKTDH-AGGAAGAGLVGAMLTAAQN---- 213 (373)
T ss_pred E-CCCCEEeEEcCCCce--EEEEeCCCceEEEEcCC------------CCEEEEEC-CCcEEEEEeccccccCCcc----
Confidence 7 54 33322 222111 34567776665543322 35556666 33322 1110000 00001
Q ss_pred CccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-------------ccceeeee
Q 004456 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-------------DLRFRSVS 305 (752)
Q Consensus 239 ~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~ 305 (752)
-...+.+++++.. ++|.+ ..+.++++|. .+...+.+... ......++
T Consensus 214 ----~~~~~~~~~~~~~-~~~~~------------~~~~v~vid~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 214 ----LLTQPAQANKSGR-IVWPV------------YSGKILQADI---SAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred ----eeecceeEecCCE-EEEEc------------CCceEEEEec---cCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 0123577888877 77774 2337888887 33332222211 11123367
Q ss_pred eecCCceEEEeeecc------cCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcce
Q 004456 306 WCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (752)
Q Consensus 306 ~spDg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~ 379 (752)
++||++.++...... .....|+++|+++.+ ....+.-... .-.+.|||||+++++....
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~~g~~--------p~~i~~s~Dg~~~l~v~~~------ 338 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQISLGHD--------VDAISVAQDGGPDLYALSA------ 338 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-EEEEEECCCC--------cCeEEECCCCCeEEEEEcC------
Confidence 889998877764321 123579999998852 1122211110 1126799999966666521
Q ss_pred EEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 380 YILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
....|.++|+++++....
T Consensus 339 -------------~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 339 -------------GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred -------------CCCeEEEEECCCCCEEee
Confidence 123699999999887654
No 353
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.27 E-value=7e-10 Score=113.05 Aligned_cols=256 Identities=9% Similarity=0.043 Sum_probs=154.3
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc----ceeccC
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFE 79 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~----~~~lt~ 79 (752)
...|.++++.. ++....... ....+....|+|||+.|+... ....|.++++.... ...+..
T Consensus 38 dg~v~vw~~~~----~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----------~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 38 DGTVRLWSKDD----QWLGTVVYT-GQGFLNSVCYDSEKELLLFGG----------KDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp TSEEEEEEESS----SEEEEEEEE-CSSCEEEEEEETTTTEEEEEE----------TTSCEEEEETTCCTTSCC-CEECC
T ss_pred CCcEEEEECCC----CEEEEEeec-CCccEEEEEECCCCCEEEEec----------CCCeEEEEEeeecCCCCcccchhh
Confidence 34577888866 543333211 233588899999999999864 33567777776543 222211
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEE
Q 004456 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (752)
Q Consensus 80 ~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i 159 (752)
+.. .+..+.| +++.|+..+. .+.|
T Consensus 103 ~~~-----~i~~~~~--~~~~l~~~~~-------------------------------------------------d~~i 126 (313)
T 3odt_A 103 HQG-----NVCSLSF--QDGVVISGSW-------------------------------------------------DKTA 126 (313)
T ss_dssp CSS-----CEEEEEE--ETTEEEEEET-------------------------------------------------TSEE
T ss_pred ccc-----CEEEEEe--cCCEEEEEeC-------------------------------------------------CCCE
Confidence 111 3456677 5677766532 1567
Q ss_pred EEEccCC-CccccCCc-cceeccccCC-CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcc
Q 004456 160 VLGSLDG-TAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (752)
Q Consensus 160 ~~~~~~G-~~~~l~~~-~~~~~~~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 236 (752)
.+++ .+ ....+..+ ..+..+.|+| +++.|+....+. .+.+||.. .....+....
T Consensus 127 ~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------------~i~i~d~~-~~~~~~~~~~-------- 183 (313)
T 3odt_A 127 KVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK-------------TIKLWQND-KVIKTFSGIH-------- 183 (313)
T ss_dssp EEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS-------------CEEEEETT-EEEEEECSSC--------
T ss_pred EEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC-------------CEEEEecC-ceEEEEeccC--------
Confidence 7777 44 33344434 6777888888 899988876553 78999833 2223332211
Q ss_pred cCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEe
Q 004456 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNE 316 (752)
Q Consensus 237 ~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~ 316 (752)
...+..+.|+|+|+ ++... ..+.+.++|+. .+.....+......+..++|+|+++ |+..
T Consensus 184 ----~~~i~~~~~~~~~~--~~~~~------------~dg~i~i~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~ 242 (313)
T 3odt_A 184 ----NDVVRHLAVVDDGH--FISCS------------NDGLIKLVDMH--TGDVLRTYEGHESFVYCIKLLPNGD-IVSC 242 (313)
T ss_dssp ----SSCEEEEEEEETTE--EEEEE------------TTSEEEEEETT--TCCEEEEEECCSSCEEEEEECTTSC-EEEE
T ss_pred ----cccEEEEEEcCCCe--EEEcc------------CCCeEEEEECC--chhhhhhhhcCCceEEEEEEecCCC-EEEE
Confidence 12266899999998 44443 34478999983 2233334555667789999999994 6655
Q ss_pred eecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCe
Q 004456 317 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPF 396 (752)
Q Consensus 317 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 396 (752)
. ..+.|+++++.++ +.......... ....++|+|||+.++ ... +| .
T Consensus 243 ~----~dg~v~iwd~~~~--~~~~~~~~~~~------~i~~~~~~~~~~~~~-~~~-------------dg--------~ 288 (313)
T 3odt_A 243 G----EDRTVRIWSKENG--SLKQVITLPAI------SIWSVDCMSNGDIIV-GSS-------------DN--------L 288 (313)
T ss_dssp E----TTSEEEEECTTTC--CEEEEEECSSS------CEEEEEECTTSCEEE-EET-------------TS--------C
T ss_pred e----cCCEEEEEECCCC--ceeEEEeccCc------eEEEEEEccCCCEEE-EeC-------------CC--------c
Confidence 4 3446999998874 22222221111 111267999998443 331 12 4
Q ss_pred eEEEecCCCcee
Q 004456 397 LDLFDINTGSKE 408 (752)
Q Consensus 397 l~~~d~~~g~~~ 408 (752)
|.+||+.+++..
T Consensus 289 i~iw~~~~~~~~ 300 (313)
T 3odt_A 289 VRIFSQEKSRWA 300 (313)
T ss_dssp EEEEESCGGGCC
T ss_pred EEEEeCCCCcee
Confidence 899999876653
No 354
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.27 E-value=3.4e-10 Score=116.67 Aligned_cols=253 Identities=11% Similarity=0.035 Sum_probs=134.6
Q ss_pred ceeEEeecCCCCCCCCceeecCC--C-CCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCc-------c
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGY--P-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------A 74 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~--~-~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~-------~ 74 (752)
..|.++++.. +..+.+..+ . ....+...+|||||++||..+ ....|.+++++.+. .
T Consensus 34 ~~i~lw~~~~----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s----------~D~~v~iw~~~~~~~~~~~~~~ 99 (330)
T 2hes_X 34 RKIKLVSVKY----DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS----------FDSTVSIWAKEESADRTFEMDL 99 (330)
T ss_dssp SCEEEEECSS----SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE----------TTSCEEEEEC-------CCCEE
T ss_pred CEEEEEEecC----CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe----------CCCcEEEEEcccCcCcccccee
Confidence 4577777765 432222211 1 223588899999999998864 23567777765322 1
Q ss_pred -eeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhh
Q 004456 75 -KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (752)
Q Consensus 75 -~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 153 (752)
..+..+.. .+..+.|+|||++|+..+.+
T Consensus 100 ~~~~~~h~~-----~V~~v~~sp~g~~las~s~D---------------------------------------------- 128 (330)
T 2hes_X 100 LAIIEGHEN-----EVKGVAWSNDGYYLATCSRD---------------------------------------------- 128 (330)
T ss_dssp EEEEC---------CEEEEEECTTSCEEEEEETT----------------------------------------------
T ss_pred EEEEcCCCC-----cEEEEEECCCCCEEEEEeCC----------------------------------------------
Confidence 11211111 46788999999988876431
Q ss_pred hcccEEEEEcc-CC-C----ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecC
Q 004456 154 YTTAQLVLGSL-DG-T----AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (752)
Q Consensus 154 ~~~~~i~~~~~-~G-~----~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 226 (752)
..|.++++ .+ . ...+..+ ..+..+.|+|||+.|+..+.+. .+.+|+...+..+.+..
T Consensus 129 ---~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------------~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 129 ---KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------------TVRIWKDYDDDWECVAV 192 (330)
T ss_dssp ---SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------------CEEEEEEETTEEEEEEE
T ss_pred ---CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------------eEEEEECCCCCeeEEEE
Confidence 46777777 32 2 1233444 6788999999999998876663 78999876553222211
Q ss_pred CCCCCCCCcccCCccccccceeeeeCC--CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC---eE---Eee-c
Q 004456 227 LPPAEDIPVCYNSVREGMRSISWRADK--PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EI---LHK-L 297 (752)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspDG--~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~---l~~-~ 297 (752)
.. .....+..+.|+|++ .. |+..+ ..+.+.+|++........ .. +.. .
T Consensus 193 ~~----------~h~~~v~~~~~~~~~~~~~-l~s~s------------~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h 249 (330)
T 2hes_X 193 LN----------GHEGTVWSSDFDKTEGVFR-LCSGS------------DDSTVRVWKYMGDDEDDQQEWVCEAILPDVH 249 (330)
T ss_dssp EC----------CCSSCEEEEEECCSSSSCE-EEEEE------------TTSCEEEEEEEEECTTSCEEEEEEEECCSCC
T ss_pred cc----------CCCCcEEEEEecCCCCeeE-EEEEe------------CCCeEEEEEecCCCccccceeEEeeeccccc
Confidence 11 111236788999994 43 33332 223566666521000000 11 111 3
Q ss_pred ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccc-ccccccCCCCCCceeeCC--CCCeEEEee
Q 004456 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTS--TGTNVIAKI 371 (752)
Q Consensus 298 ~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~p~~~~s~--dg~~l~~~~ 371 (752)
...+..++|++++ .|+... .+ ..|.+++..++ +...+... ..+.. .....++|+| |+++|+..+
T Consensus 250 ~~~v~~v~~s~~~-~l~s~~-~d---g~v~iw~~~~~--~~~~~~~~~~~h~~---~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 250 KRQVYNVAWGFNG-LIASVG-AD---GVLAVYEEVDG--EWKVFAKRALCHGV---YEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp SSCEEEEEECTTS-CEEEEE-TT---SCEEEEEEETT--EEEEEEEESCTTTT---SCEEEEEEC-----CCEEEEE
T ss_pred ccceEEEEEcCCC-EEEEEe-CC---CEEEEEEcCCC--ceEEEecccccccc---ceEEEEEEecCCCceEEEEec
Confidence 4567889999776 455544 22 23555555442 11111110 00000 0111266898 788887776
No 355
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.25 E-value=1e-08 Score=105.47 Aligned_cols=308 Identities=13% Similarity=0.080 Sum_probs=162.0
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecC-CCCCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPK 114 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~-~~~~~~~ 114 (752)
..-.|||+++.. .. .........|+++|.++++...-..... .. .+..||||++||++..- .+..
T Consensus 38 ~~~~pd~~~vyV-~~----~~~~~~~~~V~ViD~~t~~v~~~I~vG~-----~P-~va~spDG~~lyVan~~~~r~~--- 103 (386)
T 3sjl_D 38 EAPAPDARRVYV-ND----PAHFAAVTQQFVIDGEAGRVIGMIDGGF-----LP-NPVVADDGSFIAHASTVFSRIA--- 103 (386)
T ss_dssp CCCCCCTTEEEE-EE----CGGGCSSEEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEETT---
T ss_pred eccCCCCCEEEE-Ec----CcccCCCCEEEEEECCCCeEEEEEECCC-----CC-cEEECCCCCEEEEEcccccccc---
Confidence 345799998744 43 1101224799999999887544322222 12 48999999999886320 0000
Q ss_pred CccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc--------cceeccccCC
Q 004456 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP--------AVYTAVEPSP 184 (752)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~--------~~~~~~~~Sp 184 (752)
. ......|.++|. +++. ..+.-+ .....+.+||
T Consensus 104 ------------------------~-------------G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 104 ------------------------R-------------GERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp ------------------------E-------------EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred ------------------------c-------------CCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 0 001256888998 5543 223111 2466899999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccccc-ceeeeeCCCceEEEEEec
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspDG~~~l~~~~~~ 263 (752)
||++|++..... .+.+.++|+.+.+...-...+.... -...+.+ -++.++||+ ++++...
T Consensus 147 DGk~lyVan~~~-----------~~~VsVID~~t~~vv~tI~v~g~~~------~~P~g~~~~~~~~~DG~--~~~v~~~ 207 (386)
T 3sjl_D 147 DGKTLLFYQFSP-----------APAVGVVDLEGKAFKRMLDVPDCYH------IFPTAPDTFFMHCRDGS--LAKVAFG 207 (386)
T ss_dssp TSSEEEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEE------EEEEETTEEEEEETTSC--EEEEECC
T ss_pred CCCEEEEEEcCC-----------CCeEEEEECCCCcEEEEEECCCcce------eecCCCceeEEECCCCC--EEEEECC
Confidence 999999875431 1478999999887654333222100 0011122 247777887 3444321
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCCeEEeec--ccceeeeeee-cCCceEEEeeecccCceeEEEEcCCCCCcccee
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~~~~~~~~~s-pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (752)
.. +++. +. .. .+... ......+.|. +||+ ++|.+. ..+++.+|+.+. ....
T Consensus 208 ~~----------g~v~--~~---~~----~~~~~~~~~~~~~~~~~~~dG~-~~~vs~----~g~V~v~d~~~~--~~~v 261 (386)
T 3sjl_D 208 TE----------GTPE--IT---HT----EVFHPEDEFLINHPAYSQKAGR-LVWPTY----TGKIHQIDLSSG--DAKF 261 (386)
T ss_dssp SS----------SCCE--EE---EC----CCCSCTTSCBCSCCEEETTTTE-EEEEBT----TSEEEEEECTTS--SCEE
T ss_pred CC----------CeEE--Ee---ec----ceeccccccccccceeEcCCCc-EEEEeC----CCEEEEEECCCC--ccee
Confidence 10 1110 00 00 00000 1111224664 7785 555542 346999999874 2222
Q ss_pred ccccc--------cccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEee
Q 004456 341 LFDRV--------FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (752)
Q Consensus 341 l~~~~--------~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (752)
+.... ..... .+...++.+++++.|++..... ...+......+|+++|++|++..+-+.
T Consensus 262 ~~~~~~~~~~~~~~g~~p--~g~q~~a~~~~~~~lyV~~~~~-----------~~~~hk~~~~~V~viD~~t~kv~~~i~ 328 (386)
T 3sjl_D 262 LPAVEALTEAERADGWRP--GGWQQVAYHRALDRIYLLVDQR-----------DEWRHKTASRFVVVLDAKTGERLAKFE 328 (386)
T ss_dssp CCCEESSCHHHHHTTEEE--CSSSCEEEETTTTEEEEEEEEC-----------CTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred ecceeccccccccccccC--CCcceeeECCCCCeEEEEeccc-----------cccccCCCCCEEEEEECCCCeEEEEEE
Confidence 21111 00000 0112244677777777765321 111112223579999999998755443
Q ss_pred ccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
...+ ..+ +.+|+|++.++|+... ....|.++|..+++..+
T Consensus 329 vg~~-----~~~-------lavs~D~~~~ly~tn~--~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 329 MGHE-----IDS-------INVSQDEKPLLYALST--GDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEE-----ECE-------EEECSSSSCEEEEEET--TTTEEEEEETTTCCEEE
T ss_pred CCCC-----cce-------EEECCCCCeEEEEEcC--CCCeEEEEECCCCcEEE
Confidence 3211 223 4899999866666432 24579999999887554
No 356
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.24 E-value=7.5e-10 Score=115.37 Aligned_cols=242 Identities=7% Similarity=-0.048 Sum_probs=121.2
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||.... ..+.+++++.++........ .+....|+++++.+++++... .
T Consensus 21 ~V~~v~fs~dg~~la~g~~-----------~~~~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d--~ 81 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTL-----------KSFEIYNVHPVAHIMSQEMR------HLSKVRMLHRTNYVAFVTGVK--E 81 (355)
T ss_dssp CCCEEEECTTSSEEEEECS-----------SEEEEEEETTEEEEEEEECS------CCCEEEECTTSSEEEEECSST--T
T ss_pred ceEEEEECCCCCEEEEEcC-----------CEEEEEecCCcceeeeeecC------CeEEEEEcCCCCEEEEEECCc--c
Confidence 5888999999999987532 23556776665543322111 245668899998887663321 1
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-Cc-cccCCccceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TA-KDFGTPAVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~-~~l~~~~~~~~~~~SpDGk~ 188 (752)
....+....+...........+ ..+.+..+... ......|+++++ ++ +. ..+. ......+++| +.
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v------~~v~~~~~~~~--~~~~~~i~i~d~~~~~~~~~~~~--~~~~~~~~s~--~~ 149 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPV------KDLFLSREFIV--VSYGDVISVFKFGNPWKRITDDI--RFGGVCEFSN--GL 149 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCE------EEEEECSSEEE--EEETTEEEEEESSTTCCBSSCCE--EEEEEEEEET--TE
T ss_pred EEEEEECCCCcEEEEEECCCce------EEEEEcCCEEE--EEEcCEEEEEECCCCceeeEEec--cCCceEEEEc--cE
Confidence 1111221112111111100000 00011111100 012356777777 33 21 1111 1222344555 66
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCC--CCCCC--cccCCccccccceeeeeCCCceEEEEEecc
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP--AEDIP--VCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--~~~~~--~~~~~~~~~~~~~~wspDG~~~l~~~~~~~ 264 (752)
|++.+... .+.+.+||+.++.......... ....| ..+..+...+..++|+|||+. |+..+
T Consensus 150 la~~sg~~-----------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s--- 214 (355)
T 3vu4_A 150 LVYSNEFN-----------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCS--- 214 (355)
T ss_dssp EEEEESSC-----------TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEEEE---
T ss_pred EEEeCCCc-----------CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEEEe---
Confidence 66652221 2478999988654100000000 00000 112233344788999999996 55543
Q ss_pred CCCCccccCccce-EEeccCCCCCCCCCeEEee--cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 265 RGDANVEVSPRDI-IYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 265 ~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
..+. +.+||+. .+.....+.. ....+..++|||||+.|+..+ ....|.++++..+
T Consensus 215 ---------~d~~~v~iwd~~--~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s----~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 ---------QDGTIIRVFKTE--DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS----DKWTLHVFEIFND 272 (355)
T ss_dssp ---------TTCSEEEEEETT--TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE----TTCEEEEEESSCC
T ss_pred ---------CCCCEEEEEECC--CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE----CCCEEEEEEccCC
Confidence 3345 8889983 2333334442 566789999999999998876 2335777776653
No 357
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.24 E-value=7.2e-10 Score=118.94 Aligned_cols=198 Identities=11% Similarity=0.070 Sum_probs=121.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccC----------c-ceeccCCCCccccccccceEEecCCc-
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----------E-AKPLFESPDICLNAVFGSFVWVNNST- 99 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g----------~-~~~lt~~~~~~~~~~~~~~~wspdg~- 99 (752)
.+...+|+|++..++++. ...+.|+++++... + ...+..+.. .+..+.|+|+++
T Consensus 130 ~v~~l~~~p~~~~~lat~---------~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATK---------TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-----EGYGLSWNPNLNG 195 (430)
T ss_dssp CCSEEEEETTEEEEEEEE---------CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-----CCCCEEECTTSTT
T ss_pred cEEEEEECCCCCcEEEEE---------CCCCcEEEEECCCcccccCccccCCCcEEecCCCC-----CeEEEEeCCCCCC
Confidence 588899999854444433 23367888888762 1 122221211 356889999998
Q ss_pred EEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-C-------ccc
Q 004456 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-T-------AKD 170 (752)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~-------~~~ 170 (752)
.|+..+. .+.|.++++ .+ . ...
T Consensus 196 ~l~s~~~-------------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 196 YLLSASD-------------------------------------------------DHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp EEEEECT-------------------------------------------------TSCEEEEETTSCCBGGGEEECSEE
T ss_pred eEEEEeC-------------------------------------------------CCeEEEEeCCCCCCCCceecccee
Confidence 6665421 156888888 42 2 122
Q ss_pred cCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCce----eEEecCCCCCCCCCcccCCcccccc
Q 004456 171 FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMR 245 (752)
Q Consensus 171 l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (752)
+..+ ..+..++|+|++..++++.... +.|.+||+.... ...+.. ....+.
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~d------------g~i~i~d~~~~~~~~~~~~~~~-------------~~~~v~ 281 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADD------------QKLMIWDTRNNNTSKPSHTVDA-------------HTAEVN 281 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCSCSSSCSEEEEC-------------CSSCEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCC------------CeEEEEECCCCCCCcceeEeec-------------CCCCeE
Confidence 2333 6788999999655555544332 379999998652 122211 123377
Q ss_pred ceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCcee
Q 004456 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (752)
Q Consensus 246 ~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 325 (752)
.++|+|+|+. ++++.. ..+.|.++|+... +.....+......+..++|+|+++.++++...+ + .
T Consensus 282 ~i~~~p~~~~-~l~tg~-----------~dg~v~vwd~~~~-~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-~--~ 345 (430)
T 2xyi_A 282 CLSFNPYSEF-ILATGS-----------ADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWSPHNETILASSGTD-R--R 345 (430)
T ss_dssp EEEECSSCTT-EEEEEE-----------TTSEEEEEETTCT-TSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-S--C
T ss_pred EEEeCCCCCC-EEEEEe-----------CCCeEEEEeCCCC-CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC-C--c
Confidence 8999999998 555532 3347888888411 223445555677889999999998766554333 2 3
Q ss_pred EEEEcCCC
Q 004456 326 TWLVCPGS 333 (752)
Q Consensus 326 l~~~~~~~ 333 (752)
|.++++..
T Consensus 346 i~iwd~~~ 353 (430)
T 2xyi_A 346 LHVWDLSK 353 (430)
T ss_dssp CEEEEGGG
T ss_pred EEEEeCCC
Confidence 55555544
No 358
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2.2e-10 Score=132.18 Aligned_cols=229 Identities=14% Similarity=0.077 Sum_probs=142.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecC--CcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspd--g~~l~~~~~~~~ 109 (752)
.+...+|||||++||..+ ..+.|.++++.++..+.+.....+ ...+..+.|+|+ ++.|+..+.+
T Consensus 11 ~V~~l~~s~dg~~latg~----------~dg~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~D-- 76 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCS----------SDKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYD-- 76 (753)
T ss_dssp CEEEECCCSSSCCEEEEE----------TTTEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETT--
T ss_pred eeEEEEECCCCCeEEEEE----------CCCcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCC--
Confidence 488899999999998863 346788888775443322211111 114778899998 8888876431
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC---ccccCCc-cceeccccCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPSP 184 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~---~~~l~~~-~~~~~~~~Sp 184 (752)
+.|+++++ +++ ...+..+ ..+..+.|+|
T Consensus 77 -----------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 77 -----------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp -----------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred -----------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 57888888 553 2333434 7889999999
Q ss_pred C--CceEEEEecccCccccccccCccccEEEEecCCcee---EEecCCCCCCCCCcccCCccccccceeeee--------
Q 004456 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAEDIPVCYNSVREGMRSISWRA-------- 251 (752)
Q Consensus 185 D--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-------- 251 (752)
+ |+.|+....++ .+.+||+.+... ..+... ...+..+.|+|
T Consensus 110 ~~~~~~l~sgs~dg-------------~I~vwdl~~~~~~~~~~~~~~-------------~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 110 HEYGPLLLVASSDG-------------KVSVVEFKENGTTSPIIIDAH-------------AIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp GGGCSEEEEEETTS-------------EEEEEECCSSSCCCCEEEECC-------------SSCEEEEEECCCC------
T ss_pred CCCCCEEEEEeCCC-------------cEEEEEeecCCCcceeEeecC-------------CCceEEEEecCcccccccc
Confidence 9 89988876653 799999876622 122111 23367889999
Q ss_pred -----CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-----eEEeecccceeeeeeecC---CceEEEeee
Q 004456 252 -----DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDD---SLALVNETW 318 (752)
Q Consensus 252 -----DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~spD---g~~l~~~~~ 318 (752)
||+. ++... ..+.|.++|+. ++.. ..+......+..++|+|+ ++.|+.+..
T Consensus 164 ~~~~~d~~~-l~sgs------------~dg~I~iwd~~---~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 164 HNGTKESRK-FVTGG------------ADNLVKIWKYN---SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp ---CGGGCC-EEEEE------------TTSCEEEEEEE---TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred cccCCCCCE-EEEEE------------CCCeEEEEecc---CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 5776 55553 34468888873 2221 122334567889999999 887777662
Q ss_pred cccCceeEEEEcCCCCCccc-eeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 319 YKTSQTRTWLVCPGSKDVAP-RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.+.|.++++.++.... ..+....... ...-.++|+|||++|+...
T Consensus 228 ----Dg~I~iwd~~~~~~~~~~~~~~~~~~~----~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 228 ----DRTCIIWTQDNEQGPWKKTLLKEEKFP----DVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp ----SSCEEEEEESSSSSCCBCCBSSSSCCS----SCCCCEEECTTTCCEEEEC
T ss_pred ----CCEEEEecCCCCCCcceeEEeccCCCC----CceEEEEEcCCCCEEEEEc
Confidence 2346677766531111 1111111000 0122478999999988876
No 359
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.24 E-value=3.5e-09 Score=114.81 Aligned_cols=284 Identities=8% Similarity=0.022 Sum_probs=167.0
Q ss_pred EecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCc
Q 004456 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (752)
Q Consensus 37 ~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~ 116 (752)
.+++|+++|+..+ ..+.|.++++.+++......... ..+..+.|+|++ .|+..+.
T Consensus 127 ~~~~~~~~l~sgs----------~dg~i~vwd~~~~~~~~~~~~h~----~~V~~l~~~~~~-~l~s~s~---------- 181 (464)
T 3v7d_B 127 CLQFEDNYVITGA----------DDKMIRVYDSINKKFLLQLSGHD----GGVWALKYAHGG-ILVSGST---------- 181 (464)
T ss_dssp EEEEETTEEEEEE----------TTSCEEEEETTTTEEEEEECCCS----SCEEEEEECSTT-EEEEEET----------
T ss_pred EEEECCCEEEEEc----------CCCcEEEEECCCCcEEEEEeCCC----cCEEEEEEcCCC-EEEEEeC----------
Confidence 5677888887753 34689999998887544332221 146788999998 4554422
Q ss_pred cCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccC--CCCceEEE
Q 004456 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPS--PDQKYVLI 191 (752)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~S--pDGk~l~~ 191 (752)
.+.|.++++ +|+ ...+..+ ..+..+.|+ ||++.|+.
T Consensus 182 ---------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s 222 (464)
T 3v7d_B 182 ---------------------------------------DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT 222 (464)
T ss_dssp ---------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEE
T ss_pred ---------------------------------------CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEE
Confidence 157888898 663 3444434 677777777 68888888
Q ss_pred EecccCccccccccCccccEEEEecCCceeEEecCCCCCCC--------CC---cccCCccccccceeeeeCCCceEEEE
Q 004456 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED--------IP---VCYNSVREGMRSISWRADKPSTLYWV 260 (752)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~--------~~---~~~~~~~~~~~~~~wspDG~~~l~~~ 260 (752)
.+.+. .+.+||+.+.............. .+ ..+.... ..-..++++|+. ++..
T Consensus 223 ~s~d~-------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~-l~~~ 286 (464)
T 3v7d_B 223 GSRDN-------------TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM--ASVRTVSGHGNI-VVSG 286 (464)
T ss_dssp EETTS-------------CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS--SCEEEEEEETTE-EEEE
T ss_pred EcCCC-------------cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc--ceEEEEcCCCCE-EEEE
Confidence 76653 78999987664322111100000 00 0000111 112456888886 5554
Q ss_pred EeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCcccee
Q 004456 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (752)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (752)
. ..+.+.++|+. .+.....+......+..++|+||++.|+.++ ..+.|.++++.++ +...
T Consensus 287 ~------------~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~----~dg~i~vwd~~~~--~~~~ 346 (464)
T 3v7d_B 287 S------------YDNTLIVWDVA--QMKCLYILSGHTDRIYSTIYDHERKRCISAS----MDTTIRIWDLENG--ELMY 346 (464)
T ss_dssp E------------TTSCEEEEETT--TTEEEEEECCCSSCEEEEEEETTTTEEEEEE----TTSCEEEEETTTT--EEEE
T ss_pred e------------CCCeEEEEECC--CCcEEEEecCCCCCEEEEEEcCCCCEEEEEe----CCCcEEEEECCCC--cEEE
Confidence 3 34478889883 2222333444566788999999999988876 3345888888774 2222
Q ss_pred ccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhh
Q 004456 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (752)
Q Consensus 341 l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (752)
........ ...++|+ +++|+..+.+ | .|.+||+.+++.........
T Consensus 347 ~~~~h~~~------v~~~~~~--~~~l~s~s~d-------------g--------~v~vwd~~~~~~~~~~~~~~----- 392 (464)
T 3v7d_B 347 TLQGHTAL------VGLLRLS--DKFLVSAAAD-------------G--------SIRGWDANDYSRKFSYHHTN----- 392 (464)
T ss_dssp EECCCSSC------EEEEEEC--SSEEEEEETT-------------S--------EEEEEETTTCCEEEEEECTT-----
T ss_pred EEeCCCCc------EEEEEEc--CCEEEEEeCC-------------C--------cEEEEECCCCceeeeecCCC-----
Confidence 22111111 1114444 6677666532 1 58999998776543332211
Q ss_pred ceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
.....+++++++.++... ...|+++|+.+++...
T Consensus 393 -------~~~~~~~~~~~~~l~~~~-----dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 393 -------LSAITTFYVSDNILVSGS-----ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------CCCEEEEEECSSEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred -------CccEEEEEeCCCEEEEec-----CCeEEEEECCCCcEEe
Confidence 122347899999776643 2479999999887654
No 360
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.23 E-value=3.6e-09 Score=113.41 Aligned_cols=213 Identities=10% Similarity=0.072 Sum_probs=118.6
Q ss_pred cceeccccCCCCc-eEEEEecccCccccccccCccccEEEEecCCcee--EEecCCCCCCCCCcccCCccccccceeeee
Q 004456 175 AVYTAVEPSPDQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (752)
Q Consensus 175 ~~~~~~~~SpDGk-~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (752)
..+..++|+|+++ .|+....+ +.|.+|++..... ..+... ..+......+..++|+|
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~~-------~~~~~h~~~v~~v~~~p 241 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDD-------------HTICLWDINATPKEHRVIDAK-------NIFTGHTAVVEDVAWHL 241 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTT-------------SCEEEEETTSCCBGGGEEECS-------EEECCCSSCEEEEEECS
T ss_pred CCeEEEEeCCCCCCeEEEEeCC-------------CeEEEEeCCCCCCCCceeccc-------eeecCCCCCEeeeEEeC
Confidence 6778999999999 55555433 3799999986321 110000 01111223377899999
Q ss_pred CCCceEEEEEeccCCCCccccCccceEEeccCCCCC-CCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEc
Q 004456 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (752)
Q Consensus 252 DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 330 (752)
++.. ++++.. ..+.|.++|+.... ......+......+..++|+|+++.++++...+ +.|.+++
T Consensus 242 ~~~~-~l~s~~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd 306 (430)
T 2xyi_A 242 LHES-LFGSVA-----------DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWD 306 (430)
T ss_dssp SCTT-EEEEEE-----------TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEE
T ss_pred CCCC-EEEEEe-----------CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEe
Confidence 7666 444432 34578899884111 023334545567789999999998755544232 3588888
Q ss_pred CCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCce---
Q 004456 331 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK--- 407 (752)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~--- 407 (752)
+... ..+......... ..-.++|+|+|+.++++... + ..|.+||+.....
T Consensus 307 ~~~~-~~~~~~~~~h~~------~v~~i~~sp~~~~~l~s~~~------------d--------~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 307 LRNL-KLKLHSFESHKD------EIFQVQWSPHNETILASSGT------------D--------RRLHVWDLSKIGEEQS 359 (430)
T ss_dssp TTCT-TSCSEEEECCSS------CEEEEEECSSCTTEEEEEET------------T--------SCCEEEEGGGTTCCCC
T ss_pred CCCC-CCCeEEeecCCC------CEEEEEECCCCCCEEEEEeC------------C--------CcEEEEeCCCCccccC
Confidence 7763 122222211111 11126799999876555421 1 1488888865221
Q ss_pred ---------eEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 408 ---------ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 408 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
+.+..... .......++|+|++.+++++.... ..|.+|++..
T Consensus 360 ~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~~~ 410 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGG---------HTAKISDFSWNPNEPWIICSVSED---NIMQVWQMAE 410 (430)
T ss_dssp HHHHHHCCTTEEEECCC---------CSSCEEEEEECSSSTTEEEEEETT---SEEEEEEECH
T ss_pred ccccccCCcceEEEcCC---------CCCCceEEEECCCCCCEEEEEECC---CCEEEeEccc
Confidence 11111100 011122368999999666665443 3577777553
No 361
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.22 E-value=2.7e-09 Score=110.02 Aligned_cols=245 Identities=8% Similarity=-0.012 Sum_probs=133.0
Q ss_pred cEEEEEcc-CCCccccC-Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCC
Q 004456 157 AQLVLGSL-DGTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (752)
Q Consensus 157 ~~i~~~~~-~G~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (752)
..|+++++ +|+.+.+. .. ..+..+.|+|||+.++....... ....|++++.+++..+.+......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~--- 133 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK---------STGGIFAATENGDNLQDIIEDLST--- 133 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSS---------SCCEEEEECTTSCSCEEEECSSSS---
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCC---------CCceEEEEeCCCCEEEEEEccCcc---
Confidence 57999999 55665554 22 66789999999986555432210 113689999988766533221100
Q ss_pred CcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceE
Q 004456 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLAL 313 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l 313 (752)
...+..+.++|||+ +++....... ......|+.++. +++....+.........++|+|||+.|
T Consensus 134 -------~~~~~~i~~d~~g~--l~v~~~~~~~-----~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 134 -------AYCIDDMVFDSKGG--FYFTDFRGYS-----TNPLGGVYYVSP---DFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp -------CCCEEEEEECTTSC--EEEEECCCBT-----TBCCEEEEEECT---TSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred -------CCcccceEECCCCC--EEEEeccccc-----cCCCceEEEEeC---CCCEEEEeecCCCcccceEECCCCCEE
Confidence 12256789999997 6665422110 112457888887 555566555444456778999999988
Q ss_pred EEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCC
Q 004456 314 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 393 (752)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 393 (752)
++.... ...|+++++.+.......+..............-.++++++|+..+... .
T Consensus 197 ~v~~~~---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~-~-------------------- 252 (333)
T 2dg1_A 197 WVTETT---ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY-G-------------------- 252 (333)
T ss_dssp EEEEGG---GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE-T--------------------
T ss_pred EEEeCC---CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc-C--------------------
Confidence 776422 2368888875321111111100000000000001156788886433322 1
Q ss_pred CCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCC--CCcEEEEEECC
Q 004456 394 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT--EITQYHILSWP 460 (752)
Q Consensus 394 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~--~~~~i~~~d~~ 460 (752)
...|+++|.++...+.+...... .+ .......++|++|++.|+++..... ....||++++.
T Consensus 253 ~~~v~~~d~~g~~~~~~~~~~~~---~g---~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 253 QGRVLVFNKRGYPIGQILIPGRD---EG---HMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TTEEEEECTTSCEEEEEECTTGG---GT---CSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCEEEEECCCCCEEEEEEcCCCc---cc---cccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 12588898854333433221100 00 0001234578899988877765432 34568888765
No 362
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.22 E-value=1.5e-10 Score=112.40 Aligned_cols=146 Identities=13% Similarity=0.064 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeEEEEccCCCCCCCCccCccccccch
Q 004456 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYNKTLTPFGFQTEFRTL 653 (752)
Q Consensus 579 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 653 (752)
+....+++.++++.+.++.. .+++.++||||||.++..++.++ |++++.+|++++..+-..... ......
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---~~~~~~ 151 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---TAKTSM 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS---SCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc---cccCHH
Confidence 45668889999999987643 46899999999999999999876 678999999987654221110 001111
Q ss_pred hhhHHHHHhcChhhhcCCCCCCEEEEEeC----CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeC--CCCccCCccccHH
Q 004456 654 WEATNVYIEMSPITHANKIKKPILIIHGE----VDDKVGLFPMQAERFFDALKGHGALSRLVLLP--FEHHVYAARENVM 727 (752)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~P~li~~G~----~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~H~~~~~~~~~ 727 (752)
+ ..+... ...+.. ++|+|+|+|+ .|.+|| ...++.+...++........+.+. +++|... .++.
T Consensus 152 ~---~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l-~e~~- 221 (250)
T 3lp5_A 152 F---KELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDL-PQNK- 221 (250)
T ss_dssp H---HHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCH-HHHH-
T ss_pred H---HHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcc-hhCH-
Confidence 1 111111 122333 6899999999 899999 888877766665543444444554 4669865 3333
Q ss_pred HHHHHHHHHHHH
Q 004456 728 HVIWETDRWLQK 739 (752)
Q Consensus 728 ~~~~~~~~fl~~ 739 (752)
++.+.+.+||.+
T Consensus 222 ~v~~~I~~FL~~ 233 (250)
T 3lp5_A 222 QIVSLIRQYLLA 233 (250)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHhc
Confidence 777888888854
No 363
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.21 E-value=1e-10 Score=116.39 Aligned_cols=199 Identities=13% Similarity=0.041 Sum_probs=112.0
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~ 591 (752)
..|.||++||++.. ...|.. +.. +..+|.|++++ .+|++.+...........+++.+.++
T Consensus 20 ~~~~lv~lhg~~~~-----------~~~~~~----~~~--l~~~~~v~~~d---~~G~~~~~~~~~~~~~~~~~~~~~i~ 79 (265)
T 3ils_A 20 ARKTLFMLPDGGGS-----------AFSYAS----LPR--LKSDTAVVGLN---CPYARDPENMNCTHGAMIESFCNEIR 79 (265)
T ss_dssp SSEEEEEECCTTCC-----------GGGGTT----SCC--CSSSEEEEEEE---CTTTTCGGGCCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCC-----------HHHHHH----HHh--cCCCCEEEEEE---CCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 36889999997422 122322 222 36789999944 44554433333345566666666555
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEccCCCCCCCCcc--------------Cc-------c
Q 004456 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLTPF--------------GF-------Q 647 (752)
Q Consensus 592 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~---~~p~~~~~~v~~~~~~~~~~~~~--------------~~-------~ 647 (752)
.+. ...++.|+||||||.+|+.++. .+|++++++|++++......... +. .
T Consensus 80 ~~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (265)
T 3ils_A 80 RRQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDG 154 (265)
T ss_dssp HHC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSS
T ss_pred HhC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccC
Confidence 442 1257999999999999999998 67788999998876432111100 00 0
Q ss_pred ccccchhhhH---HHHHhcCh--hhhcCCCCCCEE-EEEeCC---CCCCCC------------CHHHHHHHHHHHHhCCC
Q 004456 648 TEFRTLWEAT---NVYIEMSP--ITHANKIKKPIL-IIHGEV---DDKVGL------------FPMQAERFFDALKGHGA 706 (752)
Q Consensus 648 ~~~~~~~~~~---~~~~~~~~--~~~~~~~~~P~l-i~~G~~---D~~v~~------------~~~~~~~~~~~l~~~~~ 706 (752)
......+..+ ..+..... ......+++|++ +++|++ |..++. .......+.+.. .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~~ 232 (265)
T 3ils_A 155 STEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM--PGA 232 (265)
T ss_dssp CSCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS--TTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC--Ccc
Confidence 0000001000 11111110 111235789988 999999 987720 022222222221 114
Q ss_pred cEEEEEeCCCCccCCc-cccHHHHHHHHHHHH
Q 004456 707 LSRLVLLPFEHHVYAA-RENVMHVIWETDRWL 737 (752)
Q Consensus 707 ~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl 737 (752)
+++++.++++||.+.. .+..+.+.+.+.+||
T Consensus 233 ~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 233 SFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp CEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred ceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 6899999999997552 355666666777765
No 364
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.5e-09 Score=116.60 Aligned_cols=197 Identities=12% Similarity=0.035 Sum_probs=120.6
Q ss_pred eeceeEecC-CCCeEEEeeccccccccccCcceEEEEEccc---Ccce--eccCCCCccccccccceEEecCCcEEEEEe
Q 004456 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (752)
Q Consensus 32 ~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~---g~~~--~lt~~~~~~~~~~~~~~~wspdg~~l~~~~ 105 (752)
.+...+||| ||++||..+ ....|.++++.+ +... .++... ...+..+.|+|+++.|+..+
T Consensus 65 ~V~~~~~s~~~~~~l~s~s----------~dg~v~vwd~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGS----------DQGVIKIWNLKEIIVGEVYSSSLTYDC----SSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp CEEEEEEECSSSCEEEEEE----------TTSEEEEEEHHHHHTTCCCSCSEEEEC----SSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCCEEEEec----------CCceEEEeECcccccCcccceeeeccC----CCCEEEEEEeCCCCEEEEEe
Confidence 689999999 999998864 346888888877 4422 111111 12477899999999888764
Q ss_pred cCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc----CCCccccCC--------
Q 004456 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL----DGTAKDFGT-------- 173 (752)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~----~G~~~~l~~-------- 173 (752)
.+ +.|.++++ +|+..+...
T Consensus 131 ~d-------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 161 (437)
T 3gre_A 131 KD-------------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKIN 161 (437)
T ss_dssp TT-------------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred CC-------------------------------------------------CEEEEEEeccccCCceeeccccceeEEEE
Confidence 31 34555554 232221111
Q ss_pred ------ccceecc--ccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccccc
Q 004456 174 ------PAVYTAV--EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR 245 (752)
Q Consensus 174 ------~~~~~~~--~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (752)
...+..+ .++|||+.|+....+. .|.+||+.+.+.......+. ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~----------h~~~v~ 218 (437)
T 3gre_A 162 LKNFGKNEYAVRMRAFVNEEKSLLVALTNLS-------------RVIIFDIRTLERLQIIENSP----------RHGAVS 218 (437)
T ss_dssp GGGGSSCCCEEEEEEEECSSCEEEEEEETTS-------------EEEEEETTTCCEEEEEECCG----------GGCCEE
T ss_pred ccCcccccCceEEEEEEcCCCCEEEEEeCCC-------------eEEEEeCCCCeeeEEEccCC----------CCCceE
Confidence 1122222 2778899888876653 89999998765433222210 112267
Q ss_pred ceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEe-ecccceeee----eeecCCceEEEeeec
Q 004456 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH-KLDLRFRSV----SWCDDSLALVNETWY 319 (752)
Q Consensus 246 ~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~-~~~~~~~~~----~~spDg~~l~~~~~~ 319 (752)
.++|+|||+. |+..+ ..+.|.+||+ ..+.. ..+. .....+..+ .|+||++.|+.+.
T Consensus 219 ~~~~s~~~~~-l~s~~------------~dg~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~-- 280 (437)
T 3gre_A 219 SICIDEECCV-LILGT------------TRGIIDIWDI---RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS-- 280 (437)
T ss_dssp EEEECTTSCE-EEEEE------------TTSCEEEEET---TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES--
T ss_pred EEEECCCCCE-EEEEc------------CCCeEEEEEc---CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc--
Confidence 8999999996 55443 3447889988 33332 2222 334456777 4556788777765
Q ss_pred ccCceeEEEEcCCCC
Q 004456 320 KTSQTRTWLVCPGSK 334 (752)
Q Consensus 320 ~~~~~~l~~~~~~~~ 334 (752)
....|.++++.++
T Consensus 281 --~dg~i~iwd~~~~ 293 (437)
T 3gre_A 281 --SKTFLTIWNFVKG 293 (437)
T ss_dssp --TTEEEEEEETTTT
T ss_pred --CCCcEEEEEcCCC
Confidence 3446888888764
No 365
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.20 E-value=4e-09 Score=106.76 Aligned_cols=232 Identities=10% Similarity=0.042 Sum_probs=124.6
Q ss_pred cEEEEEccCC---C-ccccCCc-cceeccccCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC
Q 004456 157 AQLVLGSLDG---T-AKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (752)
Q Consensus 157 ~~i~~~~~~G---~-~~~l~~~-~~~~~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (752)
+.|.++++++ + ...+..+ ..+..++|+|+ |+.|+..+.+. .+.+||+.++....+...
T Consensus 31 ~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-------------~v~iWd~~~~~~~~~~~~-- 95 (297)
T 2pm7_B 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-------------KVMIWKEENGRWSQIAVH-- 95 (297)
T ss_dssp SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT-------------EEEEEEBSSSCBCCCEEE--
T ss_pred CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC-------------EEEEEEcCCCceEEEEEe--
Confidence 4677788743 2 2344445 78889999975 88887776553 799999986532221111
Q ss_pred CCCCCcccCCccccccceeeeeC--CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeee
Q 004456 230 AEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspD--G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 307 (752)
......+..++|+|+ |+. |+..+ ..+.+.++++..........+......+..++|+
T Consensus 96 --------~~h~~~v~~v~~~p~~~g~~-l~s~s------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 96 --------AVHSASVNSVQWAPHEYGPM-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp --------CCCSSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred --------ecCCCceeEEEeCcCCCCcE-EEEEE------------CCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 011223678999998 765 44443 3346778877311011133344556678889999
Q ss_pred cC-------------CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCC---CeEEEee
Q 004456 308 DD-------------SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG---TNVIAKI 371 (752)
Q Consensus 308 pD-------------g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg---~~l~~~~ 371 (752)
|+ ++.|+.++ .+ ..|.++++.++......+.....+. ...-.++|+|++ ++|+..+
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs-~D---~~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGG-AD---NLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp CCC------------CCEEEEEE-TT---SCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEE
T ss_pred CCcccccccCCCCCCcceEEEEc-CC---CcEEEEEEcCCCceEEEEEEecCCC----CceEEEEECCCCCCceEEEEEE
Confidence 97 45666655 22 2355555544311111111111110 011126799995 6676665
Q ss_pred eecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc---eeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecC
Q 004456 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 448 (752)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~ 448 (752)
.+ + .|.+||+.++. ...+..... .......++|+|||+.|+....+
T Consensus 227 ~D-------------~--------~v~iWd~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~g~~las~~~D- 275 (297)
T 2pm7_B 227 QD-------------R--------TCIIWTQDNEQGPWKKTLLKEEK---------FPDVLWRASWSLSGNVLALSGGD- 275 (297)
T ss_dssp TT-------------S--------CEEEEEESSTTSCCEEEESSSSC---------CSSCEEEEEECSSSCCEEEEETT-
T ss_pred CC-------------C--------cEEEEEeCCCCCccceeeeeccc---------CCCcEEEEEECCCCCEEEEEcCC-
Confidence 22 1 47888876543 112221000 00111235899999988765432
Q ss_pred CCCcEEEEEECC-CCCeeE
Q 004456 449 TEITQYHILSWP-LKKSSQ 466 (752)
Q Consensus 449 ~~~~~i~~~d~~-~g~~~~ 466 (752)
..|.+|+.. .|....
T Consensus 276 ---~~v~lw~~~~~g~w~~ 291 (297)
T 2pm7_B 276 ---NKVTLWKENLEGKWEP 291 (297)
T ss_dssp ---SCEEEEEECTTSCEEE
T ss_pred ---CcEEEEEECCCCcEEe
Confidence 236666654 344443
No 366
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.20 E-value=4.4e-10 Score=118.27 Aligned_cols=215 Identities=13% Similarity=0.059 Sum_probs=126.9
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh------CCcEEEecCCC
Q 004456 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLAGPSI 564 (752)
Q Consensus 491 ~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~~ 564 (752)
+|..|+.....+.. ...|.||++||.+... ..| ......|++ .||.|++ .
T Consensus 93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~s~-----------~~~----~~~~~~L~~~~~~~~~gf~vv~---~ 148 (408)
T 3g02_A 93 EGLTIHFAALFSER------EDAVPIALLHGWPGSF-----------VEF----YPILQLFREEYTPETLPFHLVV---P 148 (408)
T ss_dssp TTEEEEEEEECCSC------TTCEEEEEECCSSCCG-----------GGG----HHHHHHHHHHCCTTTCCEEEEE---E
T ss_pred CCEEEEEEEecCCC------CCCCeEEEECCCCCcH-----------HHH----HHHHHHHhcccccccCceEEEE---E
Confidence 78899988886543 1257899999964211 111 234556666 5899999 5
Q ss_pred CCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004456 565 PIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPS-RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (752)
Q Consensus 565 ~~~g~g~~~~~~----~~~~~~~~d~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~ 639 (752)
+.+|+|.+.... .......+++.+.++.+ + .+ +++++||||||.+++.++.++|+.+...+.+++....
T Consensus 149 DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~l---g---~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 149 SLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL---G---FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp CCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHT---T---CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 667777765432 23445555555544432 2 34 8999999999999999999997765555555443321
Q ss_pred CCCc--cCccc-c--------------cc-------ch----------------h--------h-----hHH------H-
Q 004456 640 TLTP--FGFQT-E--------------FR-------TL----------------W--------E-----ATN------V- 659 (752)
Q Consensus 640 ~~~~--~~~~~-~--------------~~-------~~----------------~--------~-----~~~------~- 659 (752)
.... ..+.. + .. .+ | . ..+ .
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 1000 00000 0 00 00 0 0 000 0
Q ss_pred ------------HHhcCh---hh-------hcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004456 660 ------------YIEMSP---IT-------HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 717 (752)
Q Consensus 660 ------------~~~~~~---~~-------~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 717 (752)
|.+... .. ....+++|+++++|.+|...+ +. .+.+.. ...+.+..++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~---~~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PR---SWIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CH---HHHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cH---HHHHhc---CCeeEEEECCCCc
Confidence 000000 00 234567999999999997655 33 233322 2347889999999
Q ss_pred ccCCccccHHHHHHHHHHHHHHHhcCC
Q 004456 718 HVYAARENVMHVIWETDRWLQKYCLSN 744 (752)
Q Consensus 718 H~~~~~~~~~~~~~~~~~fl~~~l~~~ 744 (752)
|... .+.++.+.+.+.+||.+.-..+
T Consensus 375 Hf~~-lE~Pe~~~~~l~~fl~~~~~~~ 400 (408)
T 3g02_A 375 HFAA-LERPRELKTDLTAFVEQVWQKG 400 (408)
T ss_dssp SCHH-HHCHHHHHHHHHHHHHHHC---
T ss_pred Cchh-hhCHHHHHHHHHHHHHHHHHcC
Confidence 9765 6778999999999998865443
No 367
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.20 E-value=3e-09 Score=109.92 Aligned_cols=164 Identities=12% Similarity=0.080 Sum_probs=93.8
Q ss_pred cEEEEEcc-CCC-c----cccCCc-cceeccccCC--CCceEEEEecccCccccccccCccccEEEEecCCce-------
Q 004456 157 AQLVLGSL-DGT-A----KDFGTP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------- 220 (752)
Q Consensus 157 ~~i~~~~~-~G~-~----~~l~~~-~~~~~~~~Sp--DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~------- 220 (752)
+.|.++++ ++. . ..+..+ ..+..++|+| ||+.|+..+.+. .+.+||+.+++
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-------------~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-------------TVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-------------CEEEEEECTTSCTTSSCS
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-------------eEEEEecCCCcccccccC
Confidence 57788887 331 1 122233 7788999999 699988876653 79999988653
Q ss_pred ---eEEecCCCCCCCCCcccCCccccccceeeeeC--CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe
Q 004456 221 ---VRELCDLPPAEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (752)
Q Consensus 221 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspD--G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 295 (752)
...+... ...+..+.|+|+ |+. |+... ..+.|.+||+. .+.....+.
T Consensus 100 ~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~-l~~~~------------~dg~v~iwd~~--~~~~~~~~~ 151 (351)
T 3f3f_A 100 WNKLCTLNDS-------------KGSLYSVKFAPAHLGLK-LACLG------------NDGILRLYDAL--EPSDLRSWT 151 (351)
T ss_dssp EEEEEEECCC-------------SSCEEEEEECCGGGCSE-EEEEE------------TTCEEEEEECS--STTCTTCCE
T ss_pred cceeeeeccc-------------CCceeEEEEcCCCCCcE-EEEec------------CCCcEEEecCC--ChHHhcccc
Confidence 2222221 223678999999 886 55543 34478888873 222222111
Q ss_pred -------------ecccceeeeeeecC---CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCcee
Q 004456 296 -------------KLDLRFRSVSWCDD---SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMT 359 (752)
Q Consensus 296 -------------~~~~~~~~~~~spD---g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 359 (752)
.....+..++|+|+ ++.++.... ...+.......+ ....+....... ...-.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~----~~~~~~~~~~~~--~~~~~~~~~~h~----~~i~~~~ 221 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL----EQAIIYQRGKDG--KLHVAAKLPGHK----SLIRSIS 221 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET----TEEEEEEECTTS--CEEEEEECCCCC----SCEEEEE
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecC----CCcEEEEccCCC--ceeeeeecCCCC----cceeEEE
Confidence 22345678899998 777777662 223444444332 222222111110 0111367
Q ss_pred eCCCC----CeEEEee
Q 004456 360 RTSTG----TNVIAKI 371 (752)
Q Consensus 360 ~s~dg----~~l~~~~ 371 (752)
|+|+| ++|+...
T Consensus 222 ~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGC 237 (351)
T ss_dssp ECCCSSCSSEEEEEEE
T ss_pred ECCCCCCcceEEEEEc
Confidence 99998 6666665
No 368
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.19 E-value=7.1e-09 Score=104.89 Aligned_cols=231 Identities=8% Similarity=0.021 Sum_probs=131.3
Q ss_pred cEEEEEccCCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCc
Q 004456 157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (752)
Q Consensus 157 ~~i~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (752)
..|+++++++..+.+... .....++++|||+.++..... ..|++++..+++.+.+.......
T Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~-------------~~i~~~d~~~g~~~~~~~~~~~~---- 112 (296)
T 3e5z_A 50 NRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGL-------------RRLERQREPGGEWESIADSFEGK---- 112 (296)
T ss_dssp TEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTT-------------TEEEEECSTTCCEEEEECEETTE----
T ss_pred CEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCC-------------CeEEEEcCCCCcEEEEeeccCCC----
Confidence 579999995545555444 667889999999855443222 36899999666655553321110
Q ss_pred ccCCccccccceeeeeCCCceEEEEEeccCC------CCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecC
Q 004456 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRG------DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDD 309 (752)
Q Consensus 236 ~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spD 309 (752)
....+.+++++|||+ ++++....+. ...........|+.++. + +....+.........++|+||
T Consensus 113 ----~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~---~-g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 113 ----KLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP---D-GTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp ----ECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT---T-SCEEEEECCCSSEEEEEECTT
T ss_pred ----CCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEECC---C-CCEEEeecCCCCCccEEECCC
Confidence 011255789999998 6665321000 00000112347888887 4 455555555555677999999
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccc---eeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAP---RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (752)
|+.+ ++.. ....|++++++.. +.. ..+...... ..-.++++++|+ |+++. .
T Consensus 183 g~~l-v~~~---~~~~i~~~~~~~~-g~~~~~~~~~~~~~~------~p~~i~~d~~G~-l~v~~-~------------- 236 (296)
T 3e5z_A 183 GNLL-VSDT---GDNATHRYCLNAR-GETEYQGVHFTVEPG------KTDGLRVDAGGL-IWASA-G------------- 236 (296)
T ss_dssp SCEE-EEET---TTTEEEEEEECSS-SCEEEEEEEECCSSS------CCCSEEEBTTSC-EEEEE-T-------------
T ss_pred CCEE-EEeC---CCCeEEEEEECCC-CcCcCCCeEeeCCCC------CCCeEEECCCCC-EEEEc-C-------------
Confidence 9988 5431 2346888887621 222 122211110 111367889996 43332 1
Q ss_pred CCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceec-ccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 387 GFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
..|+++|.++.....+.... . ...++| ++|++.|+.+.. ..|+++++.+++.+
T Consensus 237 --------~~v~~~~~~g~~~~~~~~~~------------~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 237 --------DGVHVLTPDGDELGRVLTPQ------------T-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRGLE 290 (296)
T ss_dssp --------TEEEEECTTSCEEEEEECSS------------C-CCEEEEESTTSCEEEEEET-----TEEEEEECSCCBCC
T ss_pred --------CeEEEECCCCCEEEEEECCC------------C-ceeEEEECCCCCEEEEEcC-----CeEEEEEccccccc
Confidence 14888998633333332211 0 123456 578888877652 26999998877655
Q ss_pred E
Q 004456 466 Q 466 (752)
Q Consensus 466 ~ 466 (752)
.
T Consensus 291 ~ 291 (296)
T 3e5z_A 291 H 291 (296)
T ss_dssp C
T ss_pred c
Confidence 3
No 369
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.19 E-value=2.7e-09 Score=113.24 Aligned_cols=252 Identities=13% Similarity=0.092 Sum_probs=145.5
Q ss_pred eeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCC---cEEEEEecC
Q 004456 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS---TLLIFTIPS 107 (752)
Q Consensus 32 ~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg---~~l~~~~~~ 107 (752)
.+....|+| +++.|+.. .....|.++++.+++......... .+..+.|+|.+ ..|+....
T Consensus 101 ~v~~~~~~~~~~~~l~s~----------~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~- 164 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSS----------SFDKTLKVWDTNTLQTADVFNFEE-----TVYSHHMSPVSTKHCLVAVGTR- 164 (408)
T ss_dssp CEEEEEECTTCTTCEEEE----------ETTSEEEEEETTTTEEEEEEECSS-----CEEEEEECSSCSSCCEEEEEES-
T ss_pred cEEEEEEccCCCcEEEEE----------eCCCeEEEeeCCCCccceeccCCC-----ceeeeEeecCCCCCcEEEEEcC-
Confidence 588999999 66677664 334689999999888666544333 35567888754 46666532
Q ss_pred CCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceeccccCC
Q 004456 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSP 184 (752)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~~Sp 184 (752)
.+.|.++++ ++ ....+..+ ..+..++|+|
T Consensus 165 ------------------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 165 ------------------------------------------------GPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp ------------------------------------------------SSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred ------------------------------------------------CCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 157888898 56 34455545 7888999999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCce--eEEecCCCCC--CCCCcccCCccccccceeeeeCCCceEEEE
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPA--EDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~--~~~~~~~~~~~~~~~~~~wspDG~~~l~~~ 260 (752)
||++++++.... +.+.+||+.... ...+...... ......+......+..+.|+|||+. |+..
T Consensus 197 ~~~~ll~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~ 263 (408)
T 4a11_B 197 RYDYILATASAD------------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH-LLTV 263 (408)
T ss_dssp SCTTEEEEEETT------------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE-EEEE
T ss_pred CCCcEEEEEcCC------------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE-EEEe
Confidence 999755554432 379999987653 2222111111 0011112233445778999999997 5555
Q ss_pred EeccCCCCccccCccceEEeccCCCCCCCCCeE-Eee----cccceeeeee-ecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK----LDLRFRSVSW-CDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~----~~~~~~~~~~-spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
. ..+.+.++++. .+.... +.. .........+ ...+..+++... ...|.++++.++
T Consensus 264 ~------------~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~~ 324 (408)
T 4a11_B 264 G------------TDNRMRLWNSS---NGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY----GSTIAVYTVYSG 324 (408)
T ss_dssp E------------TTSCEEEEETT---TCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE----TTEEEEEETTTC
T ss_pred c------------CCCeEEEEECC---CCccceeccccccccccccceeEEecCCCceEEEEec----CCEEEEEECcCC
Confidence 3 33468888883 322211 111 0111111222 233445555542 236888898774
Q ss_pred CccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCcee
Q 004456 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 408 (752)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 408 (752)
+........... ...++|+|||++|+....+ | .|.+||+.+++..
T Consensus 325 --~~~~~~~~~~~~------v~~~~~s~~~~~l~s~~~d-------------g--------~i~iw~~~~~~~~ 369 (408)
T 4a11_B 325 --EQITMLKGHYKT------VDCCVFQSNFQELYSGSRD-------------C--------NILAWVPSLYEPV 369 (408)
T ss_dssp --CEEEEECCCSSC------EEEEEEETTTTEEEEEETT-------------S--------CEEEEEECC----
T ss_pred --cceeeeccCCCe------EEEEEEcCCCCEEEEECCC-------------C--------eEEEEeCCCCCcc
Confidence 322222211111 1126799999998877632 1 4899999877653
No 370
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=5.8e-09 Score=106.02 Aligned_cols=261 Identities=10% Similarity=0.049 Sum_probs=148.8
Q ss_pred ccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhh
Q 004456 70 ETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (752)
Q Consensus 70 ~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (752)
.+.+.++|+.... ....+.|+|||+.|+|+..
T Consensus 33 ~~~~~~~l~~~~~-----~~egp~~~~~g~~l~~~d~------------------------------------------- 64 (305)
T 3dr2_A 33 GDARLLTLYDQAT-----WSEGPAWWEAQRTLVWSDL------------------------------------------- 64 (305)
T ss_dssp TTCCCEEEECCCS-----SEEEEEEEGGGTEEEEEET-------------------------------------------
T ss_pred CCCceEEEecCCc-----CccCCeEeCCCCEEEEEEC-------------------------------------------
Confidence 3555666654433 2357899999998888732
Q ss_pred hhhhhcccEEEEEccCCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCC
Q 004456 150 LFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (752)
Q Consensus 150 ~~~~~~~~~i~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 228 (752)
....|++++.+|+.+.+... .....+.++|||+.++..... ..|.+++.+++ .+.+....
T Consensus 65 -----~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~-------------~~v~~~~~~g~-~~~~~~~~ 125 (305)
T 3dr2_A 65 -----VGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGR-------------RAITRSDADGQ-AHLLVGRY 125 (305)
T ss_dssp -----TTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTT-------------TEEEEECTTSC-EEEEECEE
T ss_pred -----CCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCC-------------CEEEEECCCCC-EEEEEecc
Confidence 11578888887765555444 567789999999855443222 36888888744 44443221
Q ss_pred CCCCCCcccCCccccccceeeeeCCCceEEEEEeccCC------CCccccCccceEEeccCCCCCCCCCeEEeeccccee
Q 004456 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG------DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFR 302 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 302 (752)
... ....+.+++++|||+ ++++...-+. ...........|+.++. ++++...+. ......
T Consensus 126 ~~~--------~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~ 191 (305)
T 3dr2_A 126 AGK--------RLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPN 191 (305)
T ss_dssp TTE--------ECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEE
T ss_pred CCC--------ccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCc
Confidence 100 011255789999998 7775311000 00000112457899987 556666665 444556
Q ss_pred eeeeecCCceEEEeeecc--cCceeEEEEcCCCCCcc-ceeccccccccccCCCCCC-ceeeCCCCCeEEEeeeecCCcc
Q 004456 303 SVSWCDDSLALVNETWYK--TSQTRTWLVCPGSKDVA-PRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQ 378 (752)
Q Consensus 303 ~~~~spDg~~l~~~~~~~--~~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~p-~~~~s~dg~~l~~~~~~~~~~~ 378 (752)
.++|+|||+.|++..... .....|+++++++.... ...+..... +.| .++++++|+ |++...
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~-------~~pdgi~~d~~G~-lwv~~~------ 257 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD-------GLPDGFCVDRGGW-LWSSSG------ 257 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS-------SCCCSEEECTTSC-EEECCS------
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC-------CCCCeEEECCCCC-EEEecC------
Confidence 789999999887765221 01257999988753100 011111100 111 255777886 433321
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
..|+++|.++.....+.... ....+.|++|++.|+++.. ..||+++
T Consensus 258 ----------------~gv~~~~~~g~~~~~~~~~~-------------~~~~~~f~~d~~~L~it~~-----~~l~~~~ 303 (305)
T 3dr2_A 258 ----------------TGVCVFDSDGQLLGHIPTPG-------------TASNCTFDQAQQRLFITGG-----PCLWMLP 303 (305)
T ss_dssp ----------------SEEEEECTTSCEEEEEECSS-------------CCCEEEECTTSCEEEEEET-----TEEEEEE
T ss_pred ----------------CcEEEECCCCCEEEEEECCC-------------ceeEEEEeCCCCEEEEEcC-----CeEEEEE
Confidence 14888988544444442221 1223578888888877653 2577776
Q ss_pred C
Q 004456 459 W 459 (752)
Q Consensus 459 ~ 459 (752)
+
T Consensus 304 ~ 304 (305)
T 3dr2_A 304 L 304 (305)
T ss_dssp C
T ss_pred C
Confidence 4
No 371
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=4.1e-09 Score=106.62 Aligned_cols=257 Identities=9% Similarity=0.029 Sum_probs=149.4
Q ss_pred CCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCC
Q 004456 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (752)
.+.+.+.. .......|+|+|||+.|+++.. ....|++++.+++ .+.+..... .+..+.++|||
T Consensus 18 ~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~---------~~~~i~~~~~~~~-~~~~~~~~~-----~~~~l~~~~dg 80 (296)
T 3e5z_A 18 AEARRLAD--GFTWTEGPVYVPARSAVIFSDV---------RQNRTWAWSDDGQ-LSPEMHPSH-----HQNGHCLNKQG 80 (296)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEEG---------GGTEEEEEETTSC-EEEEESSCS-----SEEEEEECTTC
T ss_pred CcEEEEec--CCccccCCeEeCCCCEEEEEeC---------CCCEEEEEECCCC-eEEEECCCC-----CcceeeECCCC
Confidence 45555552 2224678999999998877643 3468999999988 665543322 34678999999
Q ss_pred cEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc---
Q 004456 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--- 174 (752)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~--- 174 (752)
+.++.. . ....|+++++ +|+.+.+...
T Consensus 81 ~l~v~~-~------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~ 111 (296)
T 3e5z_A 81 HLIACS-H------------------------------------------------GLRRLERQREPGGEWESIADSFEG 111 (296)
T ss_dssp CEEEEE-T------------------------------------------------TTTEEEEECSTTCCEEEEECEETT
T ss_pred cEEEEe-c------------------------------------------------CCCeEEEEcCCCCcEEEEeeccCC
Confidence 955433 1 1147899998 7876655332
Q ss_pred ---cceeccccCCCCceEEEEecc-c---Ccc-ccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccc
Q 004456 175 ---AVYTAVEPSPDQKYVLITSMH-R---PYS-YKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRS 246 (752)
Q Consensus 175 ---~~~~~~~~SpDGk~l~~~~~~-~---~~~-~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 246 (752)
.....++++|||+. +++... . ... ...........|+.++.+ +..+.+..... .+..
T Consensus 112 ~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-------------~~~g 176 (296)
T 3e5z_A 112 KKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV-------------KPNG 176 (296)
T ss_dssp EECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS-------------SEEE
T ss_pred CCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC-------------CCcc
Confidence 23457999999974 443210 0 000 000000012468888877 43444332211 1457
Q ss_pred eeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC---eEEee-cccceeeeeeecCCceEEEeeecccC
Q 004456 247 ISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHK-LDLRFRSVSWCDDSLALVNETWYKTS 322 (752)
Q Consensus 247 ~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~ 322 (752)
++|+|||+. | ++.. ..+.|+++++. ..+.. ..+.. .......+++++||+ |+++.
T Consensus 177 i~~s~dg~~-l-v~~~-----------~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~----- 235 (296)
T 3e5z_A 177 LAFLPSGNL-L-VSDT-----------GDNATHRYCLN--ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA----- 235 (296)
T ss_dssp EEECTTSCE-E-EEET-----------TTTEEEEEEEC--SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-----
T ss_pred EEECCCCCE-E-EEeC-----------CCCeEEEEEEC--CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-----
Confidence 899999996 5 5531 33478888772 12333 12221 223345688999997 44433
Q ss_pred ceeEEEEcCCCCCccceeccccccccccCCCCCCceee-CCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEe
Q 004456 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR-TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 401 (752)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~-s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d 401 (752)
...|++++.++. ....+.... ....+++ ++|++.|++++.+ .|+.++
T Consensus 236 ~~~v~~~~~~g~--~~~~~~~~~--------~~~~~~f~~~d~~~L~v~t~~----------------------~l~~~~ 283 (296)
T 3e5z_A 236 GDGVHVLTPDGD--ELGRVLTPQ--------TTSNLCFGGPEGRTLYMTVST----------------------EFWSIE 283 (296)
T ss_dssp TTEEEEECTTSC--EEEEEECSS--------CCCEEEEESTTSCEEEEEETT----------------------EEEEEE
T ss_pred CCeEEEECCCCC--EEEEEECCC--------CceeEEEECCCCCEEEEEcCC----------------------eEEEEE
Confidence 235999998752 212221111 1111456 6899988887622 499999
Q ss_pred cCCCceeE
Q 004456 402 INTGSKER 409 (752)
Q Consensus 402 ~~~g~~~~ 409 (752)
.++++++.
T Consensus 284 ~~~~~~~~ 291 (296)
T 3e5z_A 284 TNVRGLEH 291 (296)
T ss_dssp CSCCBCCC
T ss_pred cccccccc
Confidence 98877653
No 372
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.17 E-value=1.8e-08 Score=109.22 Aligned_cols=258 Identities=11% Similarity=0.069 Sum_probs=153.8
Q ss_pred cceeEEeecCCCCCCCCcee-ecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 4 FTGIGIHRLLPDDSLGPEKE-VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
...|.++++.. ++... +.+ ....+....|+|++ .|+.. .....|.++++++++.........
T Consensus 141 dg~i~vwd~~~----~~~~~~~~~--h~~~V~~l~~~~~~-~l~s~----------s~dg~i~vwd~~~~~~~~~~~~h~ 203 (464)
T 3v7d_B 141 DKMIRVYDSIN----KKFLLQLSG--HDGGVWALKYAHGG-ILVSG----------STDRTVRVWDIKKGCCTHVFEGHN 203 (464)
T ss_dssp TSCEEEEETTT----TEEEEEECC--CSSCEEEEEECSTT-EEEEE----------ETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCcEEEEECCC----CcEEEEEeC--CCcCEEEEEEcCCC-EEEEE----------eCCCCEEEEECCCCcEEEEECCCC
Confidence 35677888766 54333 332 22358899999999 55554 334689999998887554433222
Q ss_pred ccccccccceEEe--cCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 83 ICLNAVFGSFVWV--NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 83 ~~~~~~~~~~~ws--pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
. .+..+.|+ ++++.|+..+.+ +.|.
T Consensus 204 ~----~v~~l~~~~~~~~~~l~s~s~d-------------------------------------------------~~i~ 230 (464)
T 3v7d_B 204 S----TVRCLDIVEYKNIKYIVTGSRD-------------------------------------------------NTLH 230 (464)
T ss_dssp S----CEEEEEEEESSSCEEEEEEETT-------------------------------------------------SCEE
T ss_pred C----ccEEEEEecCCCCCEEEEEcCC-------------------------------------------------CcEE
Confidence 1 36677887 577777766432 2344
Q ss_pred EEcc-CCCc------------------------cccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEe
Q 004456 161 LGSL-DGTA------------------------KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (752)
Q Consensus 161 ~~~~-~G~~------------------------~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (752)
++++ ++.. ..+..+ ...-..++|+|+.|+....+. .+.+||
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d~-------------~i~vwd 296 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH-MASVRTVSGHGNIVVSGSYDN-------------TLIVWD 296 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC-SSCEEEEEEETTEEEEEETTS-------------CEEEEE
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc-cceEEEEcCCCCEEEEEeCCC-------------eEEEEE
Confidence 4444 2110 011111 111223578999988876653 799999
Q ss_pred cCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe
Q 004456 216 TDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (752)
Q Consensus 216 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 295 (752)
+.+.+........ ...+..+.|+|||+. |+..+ ..+.|.++|+. .+.....+.
T Consensus 297 ~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~-l~sg~------------~dg~i~vwd~~--~~~~~~~~~ 349 (464)
T 3v7d_B 297 VAQMKCLYILSGH------------TDRIYSTIYDHERKR-CISAS------------MDTTIRIWDLE--NGELMYTLQ 349 (464)
T ss_dssp TTTTEEEEEECCC------------SSCEEEEEEETTTTE-EEEEE------------TTSCEEEEETT--TTEEEEEEC
T ss_pred CCCCcEEEEecCC------------CCCEEEEEEcCCCCE-EEEEe------------CCCcEEEEECC--CCcEEEEEe
Confidence 9877554332211 123678999999996 55443 33478888883 222333444
Q ss_pred ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecC
Q 004456 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (752)
Q Consensus 296 ~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~ 375 (752)
.....+..++|+ ++.|+.++ ..+.|.++++.+. ......... ......+|+++|++|+... +
T Consensus 350 ~h~~~v~~~~~~--~~~l~s~s----~dg~v~vwd~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~-d-- 411 (464)
T 3v7d_B 350 GHTALVGLLRLS--DKFLVSAA----ADGSIRGWDANDY--SRKFSYHHT-------NLSAITTFYVSDNILVSGS-E-- 411 (464)
T ss_dssp CCSSCEEEEEEC--SSEEEEEE----TTSEEEEEETTTC--CEEEEEECT-------TCCCEEEEEECSSEEEEEE-T--
T ss_pred CCCCcEEEEEEc--CCEEEEEe----CCCcEEEEECCCC--ceeeeecCC-------CCccEEEEEeCCCEEEEec-C--
Confidence 555667778887 56677665 3345888888774 222111111 0223356899999887765 1
Q ss_pred CcceEEEEccCCCCCCCCCCeeEEEecCCCceeE
Q 004456 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 409 (752)
Q Consensus 376 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 409 (752)
..|.+||+.+|+...
T Consensus 412 -------------------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 -------------------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------------------TEEEEEETTTCCEEE
T ss_pred -------------------CeEEEEECCCCcEEe
Confidence 159999999987643
No 373
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=2.1e-08 Score=110.07 Aligned_cols=338 Identities=9% Similarity=-0.018 Sum_probs=184.0
Q ss_pred ceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 004456 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (752)
Q Consensus 34 ~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (752)
..+.|+.|...++|++. ...+.|+++|.++++...-..... .+..+.+||||++|+....
T Consensus 157 ~~~~~~~d~~~~~~V~~--------~~~~~V~viD~~t~~v~~~i~~g~-----~p~~v~~SpDGr~lyv~~~------- 216 (567)
T 1qks_A 157 TQQMNDWDLENLFSVTL--------RDAGQIALIDGSTYEIKTVLDTGY-----AVHISRLSASGRYLFVIGR------- 216 (567)
T ss_dssp SSCCSCCCGGGEEEEEE--------TTTTEEEEEETTTCCEEEEEECSS-----CEEEEEECTTSCEEEEEET-------
T ss_pred cccccccCCCceEEEEe--------CCCCeEEEEECCCCeEEEEEeCCC-----CccceEECCCCCEEEEEcC-------
Confidence 45778888888888875 455799999999887543222221 2346799999999887531
Q ss_pred CCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc---CCC-ccccCCccceeccccC----CC
Q 004456 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL---DGT-AKDFGTPAVYTAVEPS----PD 185 (752)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~---~G~-~~~l~~~~~~~~~~~S----pD 185 (752)
...|.++|+ +++ ..++........+.|| ||
T Consensus 217 ------------------------------------------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pD 254 (567)
T 1qks_A 217 ------------------------------------------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWE 254 (567)
T ss_dssp ------------------------------------------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCT
T ss_pred ------------------------------------------CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCC
Confidence 147889998 332 2334334556789999 79
Q ss_pred CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 186 Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
||++++..... +.+.++|..+.+................+. ....+..+..|+++.. +++..
T Consensus 255 Gk~l~v~n~~~------------~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~-p~~rva~i~~s~~~~~-~vv~~---- 316 (567)
T 1qks_A 255 DKYAIAGAYWP------------PQYVIMDGETLEPKKIQSTRGMTYDEQEYH-PEPRVAAILASHYRPE-FIVNV---- 316 (567)
T ss_dssp TTEEEEEEEET------------TEEEEEETTTCCEEEEEECCEECTTTCCEE-SCCCEEEEEECSSSSE-EEEEE----
T ss_pred CCEEEEEEccC------------CeEEEEECCCCcEEEEEecccccccccccc-CCCceEEEEEcCCCCE-EEEEe----
Confidence 99999886553 478888987765543222111000000000 0001345778888875 33332
Q ss_pred CCCccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccc
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 343 (752)
...+.|+++|.. ......++ ..........|+|||++++.+.+.. +.|.++|++++ +.....+
T Consensus 317 -------~~~g~v~~vd~~---~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~s---n~V~ViD~~t~--kl~~~i~ 381 (567)
T 1qks_A 317 -------KETGKILLVDYT---DLNNLKTTEISAERFLHDGGLDGSHRYFITAANAR---NKLVVIDTKEG--KLVAIED 381 (567)
T ss_dssp -------TTTTEEEEEETT---CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGG---TEEEEEETTTT--EEEEEEE
T ss_pred -------cCCCeEEEEecC---CCccceeeeeeccccccCceECCCCCEEEEEeCCC---CeEEEEECCCC--cEEEEEe
Confidence 245588888873 22211222 2223345678999999888876332 35999999874 2222211
Q ss_pred ccc-ccccCCCCCC-ceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCc-----eeEEeeccch
Q 004456 344 RVF-ENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-----KERIWESNRE 416 (752)
Q Consensus 344 ~~~-~~~~~~~~~p-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~-----~~~l~~~~~~ 416 (752)
. .... +++.- .+ +.|++..++++..- ....|.++|.++++ .+.+.....
T Consensus 382 --vgg~~P-hpg~g~~~-~~p~~g~v~~t~~~-------------------g~~~Vsvid~~~~~~~~~~~kvv~~i~~- 437 (567)
T 1qks_A 382 --TGGQTP-HPGRGANF-VHPTFGPVWATSHM-------------------GDDSVALIGTDPEGHPDNAWKILDSFPA- 437 (567)
T ss_dssp --CSSSSB-CCTTCEEE-EETTTEEEEEEEBS-------------------SSSEEEEEECCTTTCTTTBTSEEEEEEC-
T ss_pred --ccCcCC-CCccceee-ECCCCCcEEEeCCC-------------------CCCeEEEecCCCCCCccccCEEEEEEec-
Confidence 1 1100 11111 12 47777666555421 11247788876622 111111000
Q ss_pred hhhhceeeeecCCcceecccCCCEEEEEEecCCC---CcEEEEEECCCC-----Ce--eEeecCCCCCCCc--CCCceEE
Q 004456 417 KYFETAVALVFGQGEEDINLNQLKILTSKESKTE---ITQYHILSWPLK-----KS--SQITNFPHPYPTL--ASLQKEM 484 (752)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~---~~~i~~~d~~~g-----~~--~~lt~~~~~~~~~--~~~~~~~ 484 (752)
.-.+...+..+||+++++........ ...|.++|..+. .. +.+. . ..+..+ ....+..
T Consensus 438 --------~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~ 507 (567)
T 1qks_A 438 --------LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLP-I-AEWAGITEGQPRVVQ 507 (567)
T ss_dssp --------SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEEC-H-HHHHTCCSSCCEEEE
T ss_pred --------CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEec-c-ccccccCCCCcceEe
Confidence 00111124679999988765421111 346899997765 21 2221 0 001111 1224556
Q ss_pred EEEEcCCCcEEEEEEEe
Q 004456 485 IKYQRKDGVPLTATLYL 501 (752)
Q Consensus 485 ~~~~~~~g~~~~~~l~~ 501 (752)
++|. .+|..+....+-
T Consensus 508 ~~~~-~~G~~~~~s~~~ 523 (567)
T 1qks_A 508 GEFN-KDGTEVWFSVWN 523 (567)
T ss_dssp EEEC-TTSSEEEEEEEC
T ss_pred eeEC-CCCCEEEEEeec
Confidence 6664 577777777663
No 374
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=6e-09 Score=108.57 Aligned_cols=313 Identities=9% Similarity=-0.013 Sum_probs=154.7
Q ss_pred CCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCC
Q 004456 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVP 119 (752)
Q Consensus 40 PDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 119 (752)
||++++ |++... ........|+++|.++++......... .. .+.+||||++||.+........
T Consensus 13 ~~~~~~-yv~~~~---~~~~~d~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spdg~~lyv~~~~~~~~~------- 75 (361)
T 2oiz_A 13 PQENRI-YVMDSV---FMHLTESRVHVYDYTNGKFLGMVPTAF-----NG-HVQVSNDGKKIYTMTTYHERIT------- 75 (361)
T ss_dssp CGGGEE-EEEECC---GGGGGGCEEEEEETTTCCEEEEEECCE-----EE-EEEECTTSSEEEEEEEEETTSS-------
T ss_pred CCCCEE-EEECCC---CCccccCeEEEEECCCCeEEEEecCCC-----CC-ceEECCCCCEEEEEEecccccc-------
Confidence 577765 554310 111224689999998887543222211 23 7899999999988642100000
Q ss_pred CCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCC-------ccceeccccCCCCceEE
Q 004456 120 LGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT-------PAVYTAVEPSPDQKYVL 190 (752)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~-------~~~~~~~~~SpDGk~l~ 190 (752)
.+ .....|.++|+ +++. ..+.. ......+.+|||||+|+
T Consensus 76 ---------~g-----------------------~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 76 ---------RG-----------------------KRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp ---------SS-----------------------CEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred ---------cC-----------------------CCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 00 01146888888 5533 22221 13456889999999999
Q ss_pred EEecccCccccccccCccccEEEEecCCceeEEe-cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCc
Q 004456 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (752)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~ 269 (752)
+..... ...+.++|+++.+...- ...... .+..+ ........++.++||+. +++.. ...+
T Consensus 124 v~n~~~-----------~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~-~p~~~~~~~~~~~dg~~-~~v~~-~~~g--- 184 (361)
T 2oiz_A 124 LQNASP-----------ATSIGIVDVAKGDYVEDVTAAAGC--WSVIP-QPNRPRSFMTICGDGGL-LTINL-GEDG--- 184 (361)
T ss_dssp EEEESS-----------SEEEEEEETTTTEEEEEEGGGTTE--EEEEE-CTTSSSEEEEEETTSSE-EEEEE-CTTS---
T ss_pred EECCCC-----------CCeEEEEECCCCcEEEEEecCCCc--ceeEE-cCCCCeeEEEECCCCcE-EEEEE-CCCC---
Confidence 875431 14789999988755432 221110 00000 00000123455666653 22221 1000
Q ss_pred cccCccceEE-eccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccc--
Q 004456 270 VEVSPRDIIY-TQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-- 346 (752)
Q Consensus 270 ~~~~~~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-- 346 (752)
.+. .... ..+............+||++.+++... ...++.+++.+. ....+.....
T Consensus 185 -------~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~v~v~d~~~~--~~~~~~~~~~~~ 243 (361)
T 2oiz_A 185 -------KVASQSRS--------KQMFSVKDDPIFIAPALDKDKAHFVSY----YGNVYSADFSGD--EVKVDGPWSLLN 243 (361)
T ss_dssp -------SEEEEEEC--------CCCSCTTTSCBCSCCEECSSEEEEEBT----TSEEEEEECSSS--SCEEEEEEESCC
T ss_pred -------cEeeeccc--------cceEcCCCCceEEEecccCCEEEEEeC----CCeEEEEEecCC--CceecccccccC
Confidence 010 0000 000011111122345788888877652 236999998763 1111111000
Q ss_pred ---cccc-CCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhce
Q 004456 347 ---ENVY-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (752)
Q Consensus 347 ---~~~~-~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (752)
.... ...+...++++|||++++.....+. ..+. .......|++||+++++...-....
T Consensus 244 ~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~---------~~~~-~~~~~~~v~viD~~t~~~v~~i~~~-------- 305 (361)
T 2oiz_A 244 DEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG---------KEGT-HKFPAAEIWVMDTKTKQRVARIPGR-------- 305 (361)
T ss_dssp HHHHHTTCEECCSSCEEEETTTTEEEEEEESSC---------CTTC-TTCCCSEEEEEETTTTEEEEEEECT--------
T ss_pred ccccccccccCCeeEEEEecCCCeEEEEEccCC---------Cccc-ccCCCceEEEEECCCCcEEEEEecC--------
Confidence 0000 0001112567888887776643100 0010 0112347999999998764433221
Q ss_pred eeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeEeec
Q 004456 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 469 (752)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~lt~ 469 (752)
. ...++|||||++|+. ... ..|.++|..+++++.+..
T Consensus 306 ----~-p~~ia~spdg~~l~v-~n~----~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 306 ----D-ALSMTIDQQRNLMLT-LDG----GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp ----T-CCEEEEETTTTEEEE-ECS----SCEEEEECSSSSCEEEEE
T ss_pred ----C-eeEEEECCCCCEEEE-eCC----CeEEEEECCCCcceeeEE
Confidence 1 223589999996654 332 679999999985444443
No 375
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.2e-09 Score=119.28 Aligned_cols=235 Identities=11% Similarity=0.041 Sum_probs=133.1
Q ss_pred CceeceeEecCCC---------CeEEEeeccccc---------cccccCcceEEEEEcccCcce-----eccCCCCcccc
Q 004456 30 GAKINFVSWSPDG---------KRIAFSVRVDEE---------DNVSSCKLRVWIADAETGEAK-----PLFESPDICLN 86 (752)
Q Consensus 30 ~~~~~~~~~SPDG---------~~ia~~~~~~~~---------~~~~~~~~~l~v~~~~~g~~~-----~lt~~~~~~~~ 86 (752)
+..+....|+|++ ++||..+..... ....+....|.|+++++++.. .+.....
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~---- 208 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG---- 208 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC----
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC----
Confidence 3368889999998 778776542100 011234566777788777642 1222111
Q ss_pred ccccceEEecC------CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEE
Q 004456 87 AVFGSFVWVNN------STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (752)
Q Consensus 87 ~~~~~~~wspd------g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~ 160 (752)
.+..+.|+|+ ++.|+..+.+ +.|.
T Consensus 209 -~V~~v~wsp~~~~~~~~~~LAs~s~D-------------------------------------------------gtvr 238 (524)
T 2j04_B 209 -EVWDLKWHEGCHAPHLVGCLSFVSQE-------------------------------------------------GTIN 238 (524)
T ss_dssp -SEEEEEECSSCCCSSSSCEEEEEETT-------------------------------------------------SCEE
T ss_pred -cEEEEEECCCCCCCCCCceEEEEecC-------------------------------------------------CeEE
Confidence 3678899997 4667655321 4677
Q ss_pred EEcc-CCCcc------------ccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCce-e-EEe
Q 004456 161 LGSL-DGTAK------------DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-V-REL 224 (752)
Q Consensus 161 ~~~~-~G~~~------------~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~-~~l 224 (752)
++++ .+... .+..+ ..+..++|+|++ .|+..+.+ +.|.+||+.++. . ..+
T Consensus 239 lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D-------------gtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 239 FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN-------------GFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT-------------SEEEEEETTBCSSCSEEE
T ss_pred EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC-------------CEEEEEECCCCCCceEEe
Confidence 7777 33211 22223 678899999875 66666555 389999998542 1 112
Q ss_pred cCCCCCCCCCcccCCccccccce--eeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc--cc
Q 004456 225 CDLPPAEDIPVCYNSVREGMRSI--SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LR 300 (752)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~ 300 (752)
.. ....+..+ .|+|+|...|+-.+ ..+.+.+||+. ++.....+.... ..
T Consensus 305 ~~-------------H~~~V~sv~~~~s~~g~~~laS~S------------~D~tvklWD~~--~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 305 QV-------------HDSYILSVSTAYSDFEDTVVSTVA------------VDGYFYIFNPK--DIATTKTTVSRFRGSN 357 (524)
T ss_dssp EC-------------SSSCEEEEEEECCTTSCCEEEEEE------------TTSEEEEECGG--GHHHHCEEEEECSCCS
T ss_pred ec-------------ccccEEEEEEEcCCCCCeEEEEec------------cCCeEEEEECC--CCCcccccccccccCc
Confidence 21 12236676 68999843144443 34478888883 222222333222 23
Q ss_pred eeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 301 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
+..++||||++.++.+.. ...|.++++..+. ....+..+. .. .-.++|||+|+.|+..+
T Consensus 358 v~~v~fsp~~~~l~s~~~----d~tv~lwd~~~~~-~~~~l~gH~-~~------V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDG----ASSLRAVPSRAAF-AVHPLVSRE-TT------ITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp CCCEEEETTTTEEEEECS----SSEEEEEETTCTT-CCEEEEECS-SC------EEEEECCSSCCBCEEEE
T ss_pred ccceEeCCCcCeEEEeCC----CCcEEEEECcccc-cceeeecCC-Cc------eEEEEeCCCCCeEEEEE
Confidence 677999999998877652 2347788877642 222232211 11 11377999999988776
No 376
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=4.7e-09 Score=106.27 Aligned_cols=224 Identities=8% Similarity=-0.043 Sum_probs=128.3
Q ss_pred cEEEEEccC-CCccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCc
Q 004456 157 AQLVLGSLD-GTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (752)
Q Consensus 157 ~~i~~~~~~-G~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (752)
..|++++++ ++...+.....+..+.++|||+ |++.. . ..|+++|.++++.+.+...... .+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~-------------~~l~~~d~~~g~~~~~~~~~~~--~~- 96 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G-------------TKFCALNWKEQSAVVLATVDND--KK- 96 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T-------------TEEEEEETTTTEEEEEEECCTT--CS-
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C-------------CeEEEEECCCCcEEEEEecCCC--CC-
Confidence 589999994 4554443346677899999999 44442 2 2689999988877766543211 00
Q ss_pred ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEE
Q 004456 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (752)
Q Consensus 236 ~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~ 315 (752)
...+.++.++|||+ +++..................||.++. ++ ....+.........++|+|||+.|++
T Consensus 97 -----~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~---~g-~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 97 -----NNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFP---DH-HVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp -----SEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECT---TS-CEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred -----CCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEEC---CC-CEEEEeeccccccceEEcCCCCEEEE
Confidence 12245789999998 666543321111001123457888876 33 44444444445567899999998877
Q ss_pred eeecccCceeEEEEcCC--CCCcc-ceeccccccccccCCCCCC-ceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCC
Q 004456 316 ETWYKTSQTRTWLVCPG--SKDVA-PRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE 391 (752)
Q Consensus 316 ~~~~~~~~~~l~~~~~~--~~~~~-~~~l~~~~~~~~~~~~~~p-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~ 391 (752)
... ....|++++++ ++... .+.+....... +.| .++.+++|+ |++....
T Consensus 166 ~~~---~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~-----~~p~g~~~d~~G~-lwva~~~------------------ 218 (297)
T 3g4e_A 166 IDS---LSYSVDAFDYDLQTGQISNRRSVYKLEKEE-----QIPDGMCIDAEGK-LWVACYN------------------ 218 (297)
T ss_dssp EEG---GGTEEEEEEECTTTCCEEEEEEEEECCGGG-----CEEEEEEEBTTSC-EEEEEET------------------
T ss_pred ecC---CCCcEEEEeccCCCCcccCcEEEEECCCCC-----CCCCeeEECCCCC-EEEEEcC------------------
Confidence 642 22358887753 32111 11121111000 111 155788884 4444311
Q ss_pred CCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecc-cCCCEEEEEEecCC
Q 004456 392 GNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN-LNQLKILTSKESKT 449 (752)
Q Consensus 392 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s-~d~~~l~~~~~~~~ 449 (752)
...|+++|.++|+.......... .+. .++|+ ||+++|+++.....
T Consensus 219 --~~~v~~~d~~tG~~~~~i~~p~~----~~t-------~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 219 --GGRVIRLDPVTGKRLQTVKLPVD----KTT-------SCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp --TTEEEEECTTTCCEEEEEECSSS----BEE-------EEEEESGGGCEEEEEEBCTT
T ss_pred --CCEEEEEcCCCceEEEEEECCCC----Cce-------EEEEeCCCCCEEEEEcCCcC
Confidence 12599999988876544332211 122 24787 89999988876544
No 377
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=2.1e-08 Score=105.10 Aligned_cols=310 Identities=13% Similarity=0.079 Sum_probs=159.5
Q ss_pred cCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccC
Q 004456 39 SPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMV 118 (752)
Q Consensus 39 SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 118 (752)
.||++++ |+++.. .....+.|.++|+++++...-..... .. .+.+||||++||.+......
T Consensus 81 ~~~~~~v-yV~n~~----~~~~~~~VsVID~~t~~vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~~~-------- 141 (426)
T 3c75_H 81 APDARRV-YIQDPA----HFAAITQQFVIDGSTGRILGMTDGGF-----LP-HPVAAEDGSFFAQASTVFER-------- 141 (426)
T ss_dssp CCCTTEE-EEEECT----TTCSSEEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEE--------
T ss_pred CCCCCEE-EEECCC----cCCCCCeEEEEECCCCEEEEEEECCC-----CC-ceEECCCCCEEEEEeccccc--------
Confidence 3788775 655411 00111799999999887544322222 23 67999999999887320000
Q ss_pred CCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCC--------ccceeccccCCCCce
Q 004456 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGT--------PAVYTAVEPSPDQKY 188 (752)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~--------~~~~~~~~~SpDGk~ 188 (752)
.........|.++|. +++.. .+.- ......+.+|||||+
T Consensus 142 -------------------------------~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 142 -------------------------------IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp -------------------------------TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE
T ss_pred -------------------------------cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 000001257889998 66432 2321 134568999999999
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCC-CCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE-DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|++..... .+.+.++|+.+.+...-...+... ..| ......+++++||+ ++++... .+.
T Consensus 191 lyV~n~~~-----------~~~VsVID~~t~kvv~~I~v~g~~~~~p------~g~~~~v~~~~dG~--~~~V~~~-~~~ 250 (426)
T 3c75_H 191 LLFYQFSP-----------APAVGVVDLEGKTFDRMLDVPDCYHIFP------ASPTVFYMNCRDGS--LARVDFA-DGE 250 (426)
T ss_dssp EEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEEEEE------EETTEEEEEETTSS--EEEEECC-TTC
T ss_pred EEEEecCC-----------CCeEEEEECCCCeEEEEEEcCCceeecc------CCCcEEEEEcCCCC--EEEEECC-CCc
Confidence 99975431 147899999987664322221110 000 00011245556665 3333211 110
Q ss_pred CccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccc
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 347 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 347 (752)
... ... ..+++ .. ......+.+++|++.+++... ...++++|+.+. ....+......
T Consensus 251 v~~----~~~-~~~~v---~~---------~p~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~--~~~v~~~~~~~ 307 (426)
T 3c75_H 251 TKV----TNT-EVFHT---ED---------ELLINHPAFSLRSGRLVWPTY----TGKIFQADLTAE--GATFRAPIEAL 307 (426)
T ss_dssp CEE----EEC-CCCSC---TT---------SCBCSCCEECTTTCEEEEEBT----TSEEEEEEECSS--CEEECCCEESS
T ss_pred EEE----Eee-eeecc---CC---------CceeeEeeecCCCCEEEEEeC----CCcEEEEeccCC--ceEEeeeeeec
Confidence 000 000 01111 00 001123567999999998762 246999998763 21111111000
Q ss_pred -----ccc-CCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhc
Q 004456 348 -----NVY-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (752)
Q Consensus 348 -----~~~-~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (752)
... ...+.-.+++++||+++++..... ..|. .......|.++|+++++..+-+.... .
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~----------~~gt-hk~~s~~VsVID~~T~kvv~~I~vg~-----~ 371 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR----------DEWK-HKAASRFVVVLNAETGERINKIELGH-----E 371 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC----------CTTC-TTSCEEEEEEEETTTCCEEEEEEEEE-----E
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEeccc----------cccc-ccCCCCEEEEEECCCCeEEEEEECCC-----C
Confidence 000 000111245788888877765210 0000 00113469999999987654332211 1
Q ss_pred eeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 422 ~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
..+ +.|++||+.++|+... ....|.++|..+++..+
T Consensus 372 P~g-------ia~spDg~~~lyv~n~--~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 372 IDS-------INVSQDAEPLLYALSA--GTQTLHIYDAATGEELR 407 (426)
T ss_dssp ECE-------EEECCSSSCEEEEEET--TTTEEEEEETTTCCEEE
T ss_pred cCe-------EEEccCCCEEEEEEcC--CCCeEEEEECCCCCEEE
Confidence 223 4899999955555542 24569999999887653
No 378
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.2e-08 Score=105.62 Aligned_cols=167 Identities=10% Similarity=0.056 Sum_probs=102.9
Q ss_pred EEEEEcc-CCC-ccccC-Cc-cceeccccCC--CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCC
Q 004456 158 QLVLGSL-DGT-AKDFG-TP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (752)
Q Consensus 158 ~i~~~~~-~G~-~~~l~-~~-~~~~~~~~Sp--DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 231 (752)
.+..+++ .++ .+.+. .+ ..+..+.|+| +|++|+..+.+. .+.+||+.+++...+......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg-------------~i~~wd~~~~~~~~~~~~~~~- 170 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG-------------TIGFQSYEDDSQYIVHSAKSD- 170 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC-------------CEEEEESSSSCEEEEECCCSS-
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC-------------cEEEEECCCCcEEEEEecCCC-
Confidence 4555565 443 33332 22 5688999999 999998876653 799999988766444322211
Q ss_pred CCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEee-cccceeeeeeecC
Q 004456 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWCDD 309 (752)
Q Consensus 232 ~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~-~~~~~~~~~~spD 309 (752)
..+..++|+|||+. |+... ..+.|.+||+. .+... ..+.. ....+..++|+||
T Consensus 171 ----------~~i~~~~~~pdg~~-lasg~------------~dg~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 171 ----------VEYSSGVLHKDSLL-LALYS------------PDGILDVYNLS--SPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp ----------CCCCEEEECTTSCE-EEEEC------------TTSCEEEEESS--CTTSCCEECCCCTTSCEEEEEECTT
T ss_pred ----------CceEEEEECCCCCE-EEEEc------------CCCEEEEEECC--CCCCCccEEeccCCCCEEEEEEeCC
Confidence 12668999999995 44432 34478899983 22233 34544 4678899999999
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
|+.|+.+. .+ .|.++|+.... ....+.......... ....++|+|+|++|+..+
T Consensus 226 g~~l~s~~-~~----~v~iwd~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 226 GYWMVVEC-DQ----TVVCFDLRKDV-GTLAYPTYTIPEFKT--GTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp SSEEEEEE-SS----BEEEEETTSST-TCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred CCEEEEEe-CC----eEEEEEcCCCC-cceeecccccccccc--cceEEEECCCCCEEEEec
Confidence 99998876 22 58888887742 112222111000000 001377999999998876
No 379
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.9e-09 Score=126.34 Aligned_cols=204 Identities=11% Similarity=0.067 Sum_probs=131.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.+...+|||||++||..+ ....|++++..+++......+.. .+..+.|+| |++|+..+.
T Consensus 19 ~V~~lafspdg~~lAsgs----------~Dg~I~lw~~~~~~~~~~~~~~~-----~V~~l~fsp-g~~L~S~s~----- 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT----------VTGEVHIYGQQQVEVVIKLEDRS-----AIKEMRFVK-GIYLVVINA----- 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEE----------TTSEEEEECSTTCEEEEECSSCC-----CEEEEEEET-TTEEEEEET-----
T ss_pred CcEEEEECCCCCEEEEEe----------CCCEEEEEeCCCcEEEEEcCCCC-----CEEEEEEcC-CCEEEEEEC-----
Confidence 488899999999999863 34688899887766544322221 477899999 886665532
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCccceeccccCCCCceE
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYV 189 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~~~~~~~~~SpDGk~l 189 (752)
...|.+||+ +|+ ...+.....+..++|+|||++|
T Consensus 78 --------------------------------------------D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 78 --------------------------------------------KDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp --------------------------------------------TCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEE
T ss_pred --------------------------------------------cCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 157899999 664 3334333778899999999999
Q ss_pred EEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCc
Q 004456 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (752)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~ 269 (752)
+....+. .|.+||+.++............. ...+......+..++|+|++.. ++.+..
T Consensus 114 ~sgs~dg-------------~V~lwd~~~~~~~~~~i~~~~~~-~~~~~~h~~~V~sl~~sp~~~~-~l~~g~------- 171 (902)
T 2oaj_A 114 LIGLQNG-------------SMIVYDIDRDQLSSFKLDNLQKS-SFFPAARLSPIVSIQWNPRDIG-TVLISY------- 171 (902)
T ss_dssp EEEETTS-------------CEEEEETTTTEEEEEEECCHHHH-HTCSSSCCCCCCEEEEETTEEE-EEEEEC-------
T ss_pred EEEcCCC-------------cEEEEECCCCccccceecccccc-ccccccCCCCeEEEEEccCCCC-EEEEEe-------
Confidence 9876653 79999999876532211000000 0001122234788999997654 333331
Q ss_pred cccCccceEEeccCCCCCCCCCeE-Eeec------------------ccceeeeeeecCCceEEEeeecccCceeEEEEc
Q 004456 270 VEVSPRDIIYTQPAEPAEGEKPEI-LHKL------------------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (752)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~-l~~~------------------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 330 (752)
..+.+ +||+ .++.... +... ...+..++|+|||+.|+.++ ....|.++|
T Consensus 172 ----~dg~v-lWd~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs----~Dg~i~lWd 239 (902)
T 2oaj_A 172 ----EYVTL-TYSL---VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH----EDNSLVFWD 239 (902)
T ss_dssp ----SSCEE-EEET---TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE----TTCCEEEEE
T ss_pred ----CCCcE-EEEC---CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE----CCCeEEEEE
Confidence 33467 8888 3333222 2211 24588899999999998876 333588888
Q ss_pred CCCC
Q 004456 331 PGSK 334 (752)
Q Consensus 331 ~~~~ 334 (752)
+.++
T Consensus 240 ~~~g 243 (902)
T 2oaj_A 240 ANSG 243 (902)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8764
No 380
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.7e-09 Score=116.36 Aligned_cols=249 Identities=10% Similarity=0.029 Sum_probs=141.6
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEec-CCcEEEEEecCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRD 111 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-dg~~l~~~~~~~~~~ 111 (752)
...+.|+|+|+.++... +| +.++.....+..... ..+..++|+| |++.|+..+.+
T Consensus 30 ~~~~~f~~~~~~~~~~~--------------~w--~~~g~~~~~~~~~h~----~~V~~~~~s~~~~~~l~s~s~d---- 85 (437)
T 3gre_A 30 RDYKEFGPIQEIVRSPN--------------MG--NLRGKLIATLMENEP----NSITSSAVSPGETPYLITGSDQ---- 85 (437)
T ss_dssp GGCGGGCCCCCCCCCCC--------------GG--GCCCCEEEEECTTTT----SCEEEEEEECSSSCEEEEEETT----
T ss_pred hchhhcCCccccccccc--------------cc--cccceEEeeeccCCC----CceEEEEECCCCCCEEEEecCC----
Confidence 45578999999998742 12 233333344422221 1467889999 99988876421
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-C---CC-cc-ccC-Cc-cceeccccC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---GT-AK-DFG-TP-AVYTAVEPS 183 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~---G~-~~-~l~-~~-~~~~~~~~S 183 (752)
+.|.+|++ + +. .+ .+. .+ ..+..++|+
T Consensus 86 ---------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 120 (437)
T 3gre_A 86 ---------------------------------------------GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMI 120 (437)
T ss_dssp ---------------------------------------------SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEEC
T ss_pred ---------------------------------------------ceEEEeECcccccCcccceeeeccCCCCEEEEEEe
Confidence 57888887 3 42 11 111 23 788899999
Q ss_pred CCCceEEEEecccCccccccccCccccEEEEecC----CceeEEecCCCCCCCCCcccCC--cccccccee--eeeCCCc
Q 004456 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD----GKLVRELCDLPPAEDIPVCYNS--VREGMRSIS--WRADKPS 255 (752)
Q Consensus 184 pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~----~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~--wspDG~~ 255 (752)
|||+.|+..+.+. .+.+||+. +...+.+...... ...+.. ....+..+. ++||++.
T Consensus 121 ~~~~~l~s~s~dg-------------~i~vwd~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T 3gre_A 121 PNFDAFAVSSKDG-------------QIIVLKVNHYQQESEVKFLNCECIR---KINLKNFGKNEYAVRMRAFVNEEKSL 184 (437)
T ss_dssp TTSSEEEEEETTS-------------EEEEEEEEEEEETTEEEEEEEEEEE---EEEGGGGSSCCCEEEEEEEECSSCEE
T ss_pred CCCCEEEEEeCCC-------------EEEEEEeccccCCceeeccccceeE---EEEccCcccccCceEEEEEEcCCCCE
Confidence 9999998876663 78889873 2222211111000 000000 011122233 6677875
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEee--cccceeeeeeecCCceEEEeeecccCceeEEEEcCC
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
|+... ..+.|.+||+ ..+.. ..+.. ....+..++|+|+++.|+.+. ....|.++|+.
T Consensus 185 -l~~~~------------~d~~i~iwd~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----~dg~i~iwd~~ 244 (437)
T 3gre_A 185 -LVALT------------NLSRVIIFDI---RTLERLQIIENSPRHGAVSSICIDEECCVLILGT----TRGIIDIWDIR 244 (437)
T ss_dssp -EEEEE------------TTSEEEEEET---TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE----TTSCEEEEETT
T ss_pred -EEEEe------------CCCeEEEEeC---CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc----CCCeEEEEEcC
Confidence 44443 3458899998 33333 33443 456789999999999998876 33458888887
Q ss_pred CCCccceecc--ccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 333 SKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 333 ~~~~~~~~l~--~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
.+ ...... .... ....-...| .|++||++|+....+ ..|.+||+.+++....
T Consensus 245 ~~--~~~~~~~~~~~~-~v~~~~~~~--~~s~~~~~l~s~~~d---------------------g~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 245 FN--VLIRSWSFGDHA-PITHVEVCQ--FYGKNSVIVVGGSSK---------------------TFLTIWNFVKGHCQYA 298 (437)
T ss_dssp TT--EEEEEEBCTTCE-EEEEEEECT--TTCTTEEEEEEESTT---------------------EEEEEEETTTTEEEEE
T ss_pred Cc--cEEEEEecCCCC-ceEEEEecc--ccCCCccEEEEEcCC---------------------CcEEEEEcCCCcEEEE
Confidence 63 222211 1111 000000011 356788888776532 1589999988876554
Q ss_pred ee
Q 004456 411 WE 412 (752)
Q Consensus 411 ~~ 412 (752)
..
T Consensus 299 ~~ 300 (437)
T 3gre_A 299 FI 300 (437)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 381
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.10 E-value=1.9e-10 Score=112.75 Aligned_cols=193 Identities=15% Similarity=0.079 Sum_probs=103.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.||++||.+.. ...+..+...| +.+|.|++ .+.+|+|.+.... ..|+.+.++.
T Consensus 13 ~~~lv~lhg~g~~---------------~~~~~~~~~~L-~~~~~vi~---~Dl~GhG~S~~~~------~~~~~~~~~~ 67 (242)
T 2k2q_B 13 KTQLICFPFAGGY---------------SASFRPLHAFL-QGECEMLA---AEPPGHGTNQTSA------IEDLEELTDL 67 (242)
T ss_dssp CCEEESSCCCCHH---------------HHHHHHHHHHH-CCSCCCEE---EECCSSCCSCCCT------TTHHHHHHHH
T ss_pred CceEEEECCCCCC---------------HHHHHHHHHhC-CCCeEEEE---EeCCCCCCCCCCC------cCCHHHHHHH
Confidence 5789999996421 11111233344 45799999 5667887764321 2344555555
Q ss_pred HHHcCCCC-CCcEEEEEeChHHHHHHHHHHh------CCCceeEEEEccCCCCCCC-Ccc----------Cccccccchh
Q 004456 593 VVRRGVAD-PSRIAVGGHSYGAFMTAHLLAH------APHLFCCGIARSGSYNKTL-TPF----------GFQTEFRTLW 654 (752)
Q Consensus 593 l~~~~~~d-~~~i~l~G~S~GG~~a~~~~~~------~p~~~~~~v~~~~~~~~~~-~~~----------~~~~~~~~~~ 654 (752)
+.+.-.+. ..++.|+||||||.+|+.+|.+ +|+.+-......+...... ... ..........
T Consensus 68 ~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (242)
T 2k2q_B 68 YKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELV 147 (242)
T ss_dssp TTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTT
T ss_pred HHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHh
Confidence 54332222 2589999999999999999986 5665311111111111000 000 0000000000
Q ss_pred hh-----------HHHHH---hcChhhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 004456 655 EA-----------TNVYI---EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 720 (752)
Q Consensus 655 ~~-----------~~~~~---~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 720 (752)
.. ...+. .... ..+.++++|+|+++|++|..++ .... .+.+.-...+++++++ ||..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~---~~~~----~~~~~~~~~~~~~~~~-gH~~ 218 (242)
T 2k2q_B 148 ENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI---RDAE----GWKKWAKDITFHQFDG-GHMF 218 (242)
T ss_dssp HHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH---HHHH----HHHTTCCCSEEEEEEC-CCSH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH---HHHH----HHHHHhcCCeEEEEeC-Ccee
Confidence 00 00111 1111 1145688999999999998753 2222 2333223345778875 8975
Q ss_pred CccccHHHHHHHHHHHHHHH
Q 004456 721 AARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 721 ~~~~~~~~~~~~~~~fl~~~ 740 (752)
. .+.++.+.+.+.+||.++
T Consensus 219 ~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 219 L-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp H-HHHCHHHHHHHHHHHHTT
T ss_pred E-cCCHHHHHHHHHHHhhcc
Confidence 4 455678888899999764
No 382
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=1e-08 Score=104.17 Aligned_cols=246 Identities=10% Similarity=0.007 Sum_probs=138.1
Q ss_pred CCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCC
Q 004456 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (752)
.+.++|.. .......|.|+|||+.|+|+.. ....|+.++. +|+.+.+..... ....+.|+|||
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~---------~~~~i~~~~~-~g~~~~~~~~~~-----~~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSDL---------VGRRVLGWRE-DGTVDVLLDATA-----FTNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEET---------TTTEEEEEET-TSCEEEEEESCS-----CEEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEEC---------CCCEEEEEeC-CCCEEEEeCCCC-----ccceeeECCCC
Confidence 45555552 2235678999999999988642 3467899987 455555543332 24578999999
Q ss_pred cEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCccccCCc----
Q 004456 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTP---- 174 (752)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~~l~~~---- 174 (752)
+.++... ....|++++.+|+.+.+...
T Consensus 98 ~l~v~~~-------------------------------------------------~~~~v~~~~~~g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 98 RLVHCEH-------------------------------------------------GRRAITRSDADGQAHLLVGRYAGK 128 (305)
T ss_dssp CEEEEET-------------------------------------------------TTTEEEEECTTSCEEEEECEETTE
T ss_pred CEEEEEC-------------------------------------------------CCCEEEEECCCCCEEEEEeccCCC
Confidence 9555431 11467888877765554332
Q ss_pred --cceeccccCCCCceEEEEec----ccCc-cccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccce
Q 004456 175 --AVYTAVEPSPDQKYVLITSM----HRPY-SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (752)
Q Consensus 175 --~~~~~~~~SpDGk~l~~~~~----~~~~-~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (752)
.....+.++|||+ |+++.. .... ........-...|+.++.++++.+.+. .. ..+..+
T Consensus 129 ~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-------------~~p~gl 193 (305)
T 3dr2_A 129 RLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-------------DHPNGL 193 (305)
T ss_dssp ECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-------------SSEEEE
T ss_pred ccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-------------CCCcce
Confidence 2345789999997 555421 0000 000000011246888998776665554 11 114468
Q ss_pred eeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC---eEEee-cccceeeeeeecCCceEEEeeecccCc
Q 004456 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHK-LDLRFRSVSWCDDSLALVNETWYKTSQ 323 (752)
Q Consensus 248 ~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~ 323 (752)
+|+|||+. ||++..... ......|+++++ ++... +.+.. .......+++.++|+ |+++. .
T Consensus 194 ~~spdg~~-lyv~~~~~~------~~~~~~i~~~~~---~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-----~ 257 (305)
T 3dr2_A 194 AFSPDEQT-LYVSQTPEQ------GHGSVEITAFAW---RDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS-----G 257 (305)
T ss_dssp EECTTSSE-EEEEECCC---------CCCEEEEEEE---ETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC-----S
T ss_pred EEcCCCCE-EEEEecCCc------CCCCCEEEEEEe---cCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec-----C
Confidence 99999997 777752210 001246888877 22211 11111 122334577889998 44443 1
Q ss_pred eeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 324 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
..|++++.++. ....+.... ..-.++|++|++.|++++
T Consensus 258 ~gv~~~~~~g~--~~~~~~~~~--------~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 258 TGVCVFDSDGQ--LLGHIPTPG--------TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SEEEEECTTSC--EEEEEECSS--------CCCEEEECTTSCEEEEEE
T ss_pred CcEEEECCCCC--EEEEEECCC--------ceeEEEEeCCCCEEEEEc
Confidence 24999998652 112221111 111266889999888876
No 383
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=4.5e-09 Score=121.19 Aligned_cols=230 Identities=9% Similarity=-0.000 Sum_probs=134.4
Q ss_pred cEEEEEcc-CC---CccccCCc-cceeccccCCC--CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC
Q 004456 157 AQLVLGSL-DG---TAKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (752)
Q Consensus 157 ~~i~~~~~-~G---~~~~l~~~-~~~~~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (752)
+.|.++++ ++ ....+..+ ..+..++|+|+ |+.|+..+.++ .|.+||+.++....+.....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-------------~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-------------KVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-------------CEEEEEEETTEEEEEEEECC
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-------------eEEEEECCCCcccccccccC
Confidence 57888887 33 22334444 78899999999 99998887663 79999998875322221111
Q ss_pred CCCCCcccCCccccccceeeeeC--CCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeee
Q 004456 230 AEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspD--G~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 307 (752)
....+..+.|+|+ |+. ++... ..+.+.++|+..........+......+..++|+
T Consensus 98 ----------h~~~V~~v~~sp~~~~~~-l~sgs------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 98 ----------HSASVNSVQWAPHEYGPL-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp ----------CSSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred ----------CCCCeEEEEECCCCCCCE-EEEEe------------CCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 1123678999999 875 55553 3447888888321112233445566778899999
Q ss_pred c-------------CCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCC---CCeEEEee
Q 004456 308 D-------------DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST---GTNVIAKI 371 (752)
Q Consensus 308 p-------------Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~d---g~~l~~~~ 371 (752)
| |++.|+.+.. .+.|.++++.++......+.....+. ...-.++|+|+ |++|+...
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~----dg~I~iwd~~~~~~~~~~~~~~~~h~----~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CCC---------CGGGCCEEEEET----TSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEE
T ss_pred CcccccccccccCCCCCEEEEEEC----CCeEEEEeccCCcccceeeeeecCCC----CcEEEEEeccCCCCCCEEEEEe
Confidence 9 6888888762 23466666655311111111111110 01123679999 88887776
Q ss_pred eecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCC
Q 004456 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI 451 (752)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~ 451 (752)
.+ | .|.+||+.+++......... ..........++|+|||+.++.... .
T Consensus 227 ~D-------------g--------~I~iwd~~~~~~~~~~~~~~------~~~~~~~v~~l~~spdg~~l~s~s~----D 275 (753)
T 3jro_A 227 QD-------------R--------TCIIWTQDNEQGPWKKTLLK------EEKFPDVLWRASWSLSGNVLALSGG----D 275 (753)
T ss_dssp SS-------------S--------CEEEEEESSSSSCCBCCBSS------SSCCSSCCCCEEECTTTCCEEEECS----S
T ss_pred cC-------------C--------EEEEecCCCCCCcceeEEec------cCCCCCceEEEEEcCCCCEEEEEcC----C
Confidence 32 1 48889987764221111000 0011122334689999998766532 3
Q ss_pred cEEEEEECCC
Q 004456 452 TQYHILSWPL 461 (752)
Q Consensus 452 ~~i~~~d~~~ 461 (752)
..|++|++.+
T Consensus 276 g~I~vwd~~~ 285 (753)
T 3jro_A 276 NKVTLWKENL 285 (753)
T ss_dssp SCEECCBCCS
T ss_pred CEEEEEecCC
Confidence 3488888764
No 384
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.05 E-value=3e-08 Score=103.30 Aligned_cols=249 Identities=9% Similarity=0.037 Sum_probs=142.9
Q ss_pred ceeEEeecCCCCCCCCc-eeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 5 TGIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
..|.++++... +... +.+.. ....+....|+|||++|+..+ ....|.++++++++...+..+..
T Consensus 64 g~i~iw~~~~~--~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~- 128 (368)
T 3mmy_A 64 NDVRCWEVQDS--GQTIPKAQQM--HTGPVLDVCWSDDGSKVFTAS----------CDKTAKMWDLSSNQAIQIAQHDA- 128 (368)
T ss_dssp SEEEEEEECTT--SCEEEEEEEE--CSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECSS-
T ss_pred CcEEEEEcCCC--CceeEEEecc--ccCCEEEEEECcCCCEEEEEc----------CCCcEEEEEcCCCCceeeccccC-
Confidence 45777777541 1221 23332 223588999999999999763 34689999999988777654433
Q ss_pred cccccccceEE--ecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 84 CLNAVFGSFVW--VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 84 ~~~~~~~~~~w--spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.+..+.| +|+++.|+..+. .+.|.+
T Consensus 129 ----~v~~~~~~~~~~~~~l~~~~~-------------------------------------------------dg~i~v 155 (368)
T 3mmy_A 129 ----PVKTIHWIKAPNYSCVMTGSW-------------------------------------------------DKTLKF 155 (368)
T ss_dssp ----CEEEEEEEECSSCEEEEEEET-------------------------------------------------TSEEEE
T ss_pred ----ceEEEEEEeCCCCCEEEEccC-------------------------------------------------CCcEEE
Confidence 4678899 899998887632 157999
Q ss_pred Ecc-CCCc-cccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCC
Q 004456 162 GSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (752)
Q Consensus 162 ~~~-~G~~-~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (752)
+|+ +++. ..+..+.....+.+++ ..++....+ ..+.+|++.............. .
T Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------------~~i~~~~~~~~~~~~~~~~~~~-~------- 212 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPERCYCADVIY--PMAVVATAE-------------RGLIVYQLENQPSEFRRIESPL-K------- 212 (368)
T ss_dssp ECSSCSSCSEEEECSSCEEEEEEET--TEEEEEEGG-------------GCEEEEECSSSCEEEEECCCSC-S-------
T ss_pred EECCCCcEEEEEecCCCceEEEecC--CeeEEEeCC-------------CcEEEEEeccccchhhhccccc-c-------
Confidence 998 6643 3333334444444443 355554444 3788888876533221111100 0
Q ss_pred ccccccceeeeeCCCc--eEEEEEeccCCCCccccCccceEEeccCCCCCCCC----CeEEeeccc------------ce
Q 004456 240 VREGMRSISWRADKPS--TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----PEILHKLDL------------RF 301 (752)
Q Consensus 240 ~~~~~~~~~wspDG~~--~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~l~~~~~------------~~ 301 (752)
.....+.+.+++.. ..+++.. ..+.+.++++. ... ...+..... .+
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~-----------~dg~i~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 213 --HQHRCVAIFKDKQNKPTGFALGS-----------IEGRVAIHYIN---PPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp --SCEEEEEEEECTTSCEEEEEEEE-----------TTSEEEEEESS---CSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred --CCCceEEEcccCCCCCCeEEEec-----------CCCcEEEEecC---CCCccccceeeeeeecccccccccccccce
Confidence 01223444444432 1122221 33467777772 221 122222221 57
Q ss_pred eeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeee
Q 004456 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (752)
Q Consensus 302 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~ 372 (752)
..++|+||++.|+.+. ..+.|.++++.++ +.......... ..-.++|+|||++|+..+.
T Consensus 277 ~~~~~sp~~~~l~s~~----~dg~i~iwd~~~~--~~~~~~~~~~~------~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVG----SDGRFSFWDKDAR--TKLKTSEQLDQ------PISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEEECTTTCCEEEEE----TTSCEEEEETTTT--EEEEECCCCSS------CEEEEEECTTSSCEEEEEC
T ss_pred EEEEEecCCCEEEEEc----cCCeEEEEECCCC--cEEEEecCCCC------CceEEEECCCCCeEEEEec
Confidence 8899999999988876 3345888888874 22222211111 1113779999999999874
No 385
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.05 E-value=1.5e-08 Score=106.08 Aligned_cols=276 Identities=11% Similarity=-0.012 Sum_probs=144.2
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee-ccCC-CC
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFES-PD 82 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~-lt~~-~~ 82 (752)
..|.++++.. ++.. ..++-+..- ...+||||++|+.+...............|.++|..+++... +.-. ..
T Consensus 99 ~~VsVID~~t----~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGST----GRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTT----TEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCC----CEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 4566777655 4332 223334444 799999999987653210000001234689999999887543 3211 00
Q ss_pred cc-ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEE
Q 004456 83 IC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (752)
Q Consensus 83 ~~-~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~ 161 (752)
.. .......+.+||||++||+.... ....|.+
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~-----------------------------------------------~~~~VsV 204 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFS-----------------------------------------------PAPAVGV 204 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECS-----------------------------------------------SSCEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEecC-----------------------------------------------CCCeEEE
Confidence 00 00023578999999999886320 0157888
Q ss_pred Ecc-CCCc-cccCCccc--------eeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCC-C
Q 004456 162 GSL-DGTA-KDFGTPAV--------YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP-A 230 (752)
Q Consensus 162 ~~~-~G~~-~~l~~~~~--------~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~ 230 (752)
+|+ +++. .++...+. ...+.+++||+.+++.. .+++......... .
T Consensus 205 ID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-----------------------~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 205 VDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-----------------------ADGETKVTNTEVFHT 261 (426)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC-----------------------CTTCCEEEECCCCSC
T ss_pred EECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-----------------------CCCcEEEEeeeeecc
Confidence 888 5533 33332211 11234555555555543 2221111000000 0
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee-------------c
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------------L 297 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------------~ 297 (752)
...|. ...+.+++||+. +++.+ ..+.++++|. .+.....+.. .
T Consensus 262 ~~~p~--------~~~~~~~~dg~~-~~~~s------------~~g~V~ViD~---~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 262 EDELL--------INHPAFSLRSGR-LVWPT------------YTGKIFQADL---TAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TTSCB--------CSCCEECTTTCE-EEEEB------------TTSEEEEEEE---CSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCce--------eeEeeecCCCCE-EEEEe------------CCCcEEEEec---cCCceEEeeeeeeccccccccccc
Confidence 00010 113578999998 77774 2246888887 3333222111 0
Q ss_pred ccceeeeeeecCCceEEEeeecc------cCceeEEEEcCCCCCccceeccccc-cccccCCCCCCceeeCCCCCeEEEe
Q 004456 298 DLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAK 370 (752)
Q Consensus 298 ~~~~~~~~~spDg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~p~~~~s~dg~~l~~~ 370 (752)
......++++|||+.++...... ...+.|+++|+.+.+ ....+.-.. ... +.++|||+.++|.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~vg~~P~g---------ia~spDg~~~lyv 387 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE-RINKIELGHEIDS---------INVSQDAEPLLYA 387 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEEEEEECE---------EEECCSSSCEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe-EEEEEECCCCcCe---------EEEccCCCEEEEE
Confidence 11122368999999887764211 124579999999852 222222111 111 6689999944454
Q ss_pred eeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 371 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
... ....|.++|+++++..+-
T Consensus 388 ~n~-------------------~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 388 LSA-------------------GTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EET-------------------TTTEEEEEETTTCCEEEE
T ss_pred EcC-------------------CCCeEEEEECCCCCEEEE
Confidence 421 123699999999887544
No 386
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.03 E-value=4.7e-09 Score=110.96 Aligned_cols=113 Identities=11% Similarity=-0.016 Sum_probs=70.4
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCccee---ccCCCCccccccccceEEec--------CCcEEEEE
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVN--------NSTLLIFT 104 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~---lt~~~~~~~~~~~~~~~wsp--------dg~~l~~~ 104 (752)
..++|+++.||..+ ....|.++++++++... +....++ ...+..+.|+| ||+.|+-.
T Consensus 95 ~~~~~~~~~las~~----------~d~~v~lw~~~~~~~~~~~~~~~~~gH--~~~v~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 95 NSSPVYSLFLACVC----------QDNTVRLIITKNETIITQHVLGGKSGH--HNFVNDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp --CCEEEEEEEEEE----------TTSCEEEEEEETTEEEEEEEECTTTSC--SSCEEEEEEEEEECTTCSEEEEEEEEE
T ss_pred eecCCCCCEEEEEe----------CCCcEEEEECCCCccceeeeecccCCC--CCceEEEEEccccccccCCCCCEEEEE
Confidence 34566677777753 34667777877775422 1111111 12477889998 88888876
Q ss_pred ecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CC-CccccCCc-cceeccc
Q 004456 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVE 181 (752)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G-~~~~l~~~-~~~~~~~ 181 (752)
+.+ ..|.+||+ ++ ....+..+ ..+..++
T Consensus 163 s~D-------------------------------------------------~tv~~Wd~~~~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 163 GDD-------------------------------------------------CTLIIWRLTDEGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp ETT-------------------------------------------------SEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred ECC-------------------------------------------------CeEEEEECCCCceeeeecCCCCCcEEEE
Confidence 432 57888888 55 44444444 7788999
Q ss_pred cCCCCceEEEEecccCccccccccCccccEEEEecCCcee
Q 004456 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 221 (752)
|+|++..++.+.... +.+.+||+.+++.
T Consensus 194 ~~p~~~~~l~~~~~d------------~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 194 FRPSNPNQLIVGERN------------GNIRIFDWTLNLS 221 (393)
T ss_dssp EETTEEEEEEEEETT------------SEEEEEETTCCC-
T ss_pred ECCCCCceEEecCCC------------CEEEEEECCCCcc
Confidence 999997555544332 3799999876643
No 387
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.00 E-value=1.7e-08 Score=103.08 Aligned_cols=226 Identities=16% Similarity=0.214 Sum_probs=129.9
Q ss_pred cceeEEeecCCCCCCCCceeecCCC-CCceeceeEecC--CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCC
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SP--DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~ 80 (752)
...|.++++.. +....+..+. ....+...+|+| +|+.||..+ ....|.++++.+++...+...
T Consensus 34 D~~v~lwd~~~----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s----------~D~~v~iWd~~~~~~~~~~~~ 99 (316)
T 3bg1_A 34 DRSVKIFDVRN----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCS----------YDRKVIIWREENGTWEKSHEH 99 (316)
T ss_dssp TTEEEEEEEET----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE----------TTSCEEEECCSSSCCCEEEEE
T ss_pred CCeEEEEEecC----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE----------CCCEEEEEECCCCcceEEEEc
Confidence 35677888766 5432222121 122588899987 488888763 346788888887753222111
Q ss_pred CCccccccccceEEecC--CcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 81 PDICLNAVFGSFVWVNN--STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 81 ~~~~~~~~~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
..+ ...+..+.|+|| |..|+..+.+ +.
T Consensus 100 ~~h--~~~V~~v~~~p~~~g~~lasgs~D-------------------------------------------------~~ 128 (316)
T 3bg1_A 100 AGH--DSSVNSVCWAPHDYGLILACGSSD-------------------------------------------------GA 128 (316)
T ss_dssp CCC--SSCCCEEEECCTTTCSCEEEECSS-------------------------------------------------SC
T ss_pred cCC--CCceEEEEECCCCCCcEEEEEcCC-------------------------------------------------CC
Confidence 111 114678899998 6777765321 45
Q ss_pred EEEEccCC--Cc---cccCCc-cceeccccCCCC-----------------ceEEEEecccCccccccccCccccEEEEe
Q 004456 159 LVLGSLDG--TA---KDFGTP-AVYTAVEPSPDQ-----------------KYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (752)
Q Consensus 159 i~~~~~~G--~~---~~l~~~-~~~~~~~~SpDG-----------------k~l~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (752)
|.++++.+ .. ..+..+ ..+..+.|+|++ ++|+..+.+ ..+.+||
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-------------~~v~lWd 195 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD-------------NLIKLWK 195 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT-------------SBCCEEE
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC-------------CeEEEEE
Confidence 77777732 21 122223 667789999984 444433322 4788998
Q ss_pred cCCce-eEEecCCCCCCCCCcccCCccccccceeeeeCC----CceEEEEEeccCCCCccccCccceEEeccCCCCCCC-
Q 004456 216 TDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADK----PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE- 289 (752)
Q Consensus 216 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG----~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 289 (752)
+.+.. .+.+.... .+...+..++|+|++ +. |+..+ ..+.|.+|++......
T Consensus 196 ~~~~~~~~~~~~l~----------~h~~~V~~v~~sp~~~~~~~~-las~s------------~D~~v~iw~~~~~~~~~ 252 (316)
T 3bg1_A 196 EEEDGQWKEEQKLE----------AHSDWVRDVAWAPSIGLPTST-IASCS------------QDGRVFIWTCDDASSNT 252 (316)
T ss_dssp ECTTSCEEEEECCB----------CCSSCEEEEECCCCSSCSCCE-EEEEE------------TTCEEEEEECSSTTCCC
T ss_pred eCCCCccceeeecc----------cCCCceEEEEecCCCCCCCce-EEEEc------------CCCeEEEEEccCccccc
Confidence 86431 12221111 112337789999997 43 44443 3347888887321111
Q ss_pred -CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCC
Q 004456 290 -KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 290 -~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
....+......+..++|+|||+.|+.+..+ +.-+||..+..
T Consensus 253 ~~~~~~~~~~~~v~~v~~sp~g~~las~~~D--~~v~lw~~~~~ 294 (316)
T 3bg1_A 253 WSPKLLHKFNDVVWHVSWSITANILAVSGGD--NKVTLWKESVD 294 (316)
T ss_dssp CBCCEEEECSSCEEEEEECTTTCCEEEEESS--SCEEEEEECTT
T ss_pred hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC--CeEEEEEECCC
Confidence 123455556778899999999999887622 23345555443
No 388
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.99 E-value=3e-09 Score=107.87 Aligned_cols=209 Identities=12% Similarity=-0.051 Sum_probs=120.0
Q ss_pred CcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCc-cCCCCchhHHHHHhCCcEEEecCCCCCCCCC
Q 004456 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (752)
Q Consensus 492 g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (752)
+..+...++.|..+... ..+.||++||.+... .. |. ..+...|.++||.|++++ .+|+|
T Consensus 13 ~~~l~~~i~~p~~~~~~---~~~~VvllHG~~~~~-----------~~~~~---~~l~~~L~~~G~~v~~~d---~~g~g 72 (317)
T 1tca_A 13 KSVLDAGLTCQGASPSS---VSKPILLVPGTGTTG-----------PQSFD---SNWIPLSTQLGYTPCWIS---PPPFM 72 (317)
T ss_dssp HHHHHHTEEETTBCTTS---CSSEEEEECCTTCCH-----------HHHHT---TTHHHHHHTTTCEEEEEC---CTTTT
T ss_pred HHHHhheeeCCCCCCCC---CCCeEEEECCCCCCc-----------chhhH---HHHHHHHHhCCCEEEEEC---CCCCC
Confidence 34556667778765322 246799999963211 11 11 135667888999999944 45555
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCCCCCCCCc----
Q 004456 571 DKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTP---- 643 (752)
Q Consensus 571 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p---~~~~~~v~~~~~~~~~~~~---- 643 (752)
.+. .....+++.+.++++.+... .+++.|+||||||.++..++.+.| ++++++|++++........
T Consensus 73 ~~~-----~~~~~~~l~~~i~~~~~~~g--~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~ 145 (317)
T 1tca_A 73 LND-----TQVNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD 145 (317)
T ss_dssp CSC-----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHH
T ss_pred CCc-----HHHHHHHHHHHHHHHHHHhC--CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhh
Confidence 431 23445677788888776532 378999999999999999988765 7899999999865421100
Q ss_pred -cCcccc---ccchhhh-HHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCCCHHH--HHHHHHHHHhCCCcEEEEEe---
Q 004456 644 -FGFQTE---FRTLWEA-TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ--AERFFDALKGHGALSRLVLL--- 713 (752)
Q Consensus 644 -~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~--~~~~~~~l~~~~~~~~~~~~--- 713 (752)
+..... ....... ...+.... .....+|+++++|..|.+|+ +.. ++.....+. +. +.+.+
T Consensus 146 ~~~~~~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~--~a--~~~~~~~~ 215 (317)
T 1tca_A 146 ALAVSAPSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLF--NG--KNVQAQAV 215 (317)
T ss_dssp HTTCBCHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCB--TS--EEEEHHHH
T ss_pred hhhhcCchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeEC--Cccccccchhhhcc--CC--ccEEeeec
Confidence 000000 0000000 01111000 01236899999999999987 443 111111121 11 22222
Q ss_pred ----CCCCccCCccccHHHHHHHHHHHHHH
Q 004456 714 ----PFEHHVYAARENVMHVIWETDRWLQK 739 (752)
Q Consensus 714 ----~~~~H~~~~~~~~~~~~~~~~~fl~~ 739 (752)
++.+|... ..++ ..+..+.+||+.
T Consensus 216 ~~~~~~~gH~~~-l~~p-~~~~~v~~~L~~ 243 (317)
T 1tca_A 216 CGPLFVIDHAGS-LTSQ-FSYVVGRSALRS 243 (317)
T ss_dssp HCTTCCCCTTHH-HHBH-HHHHHHHHHHHC
T ss_pred cCCCCccCcccc-cCCH-HHHHHHHHHhcC
Confidence 47789743 2333 456788999886
No 389
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=98.98 E-value=7.8e-10 Score=120.17 Aligned_cols=212 Identities=16% Similarity=0.058 Sum_probs=120.9
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH-HhCCcEEEecCCCCC-CCCCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPI-IGEGD 571 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~-~g~g~ 571 (752)
-+...+|.|..... ..++|+||++|||++..++. ..+.. ..... ...|++|+.++|+-. .|++.
T Consensus 85 cl~l~v~~P~~~~~--~~~~Pviv~iHGGg~~~g~~--------~~~~~----~~~~~~~~~g~vvv~~nYRlg~~Gf~~ 150 (522)
T 1ukc_A 85 CLFINVFKPSTATS--QSKLPVWLFIQGGGYAENSN--------ANYNG----TQVIQASDDVIVFVTFNYRVGALGFLA 150 (522)
T ss_dssp CCEEEEEEETTCCT--TCCEEEEEEECCSTTTSCCS--------CSCCC----HHHHHHTTSCCEEEEECCCCHHHHHCC
T ss_pred CCEEEEEECCCCCC--CCCCCEEEEECCCccccCCc--------cccCc----HHHHHhcCCcEEEEEeccccccccccc
Confidence 36677788875432 23589999999998765422 11221 11111 257999999888632 24432
Q ss_pred CCCCc--hhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEccCCCCCCCC
Q 004456 572 KLPND--RFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLT 642 (752)
Q Consensus 572 ~~~~~--~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~----p~~~~~~v~~~~~~~~~~~ 642 (752)
..... ......+.|..++++|+++.. ..|++||.|+|+|.||++++.++... +..|+++|+.+|.......
T Consensus 151 ~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~ 230 (522)
T 1ukc_A 151 SEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRT 230 (522)
T ss_dssp CHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCC
T ss_pred chhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCC
Confidence 21000 012456889999999998863 36899999999999999887776643 5689999999987542211
Q ss_pred ccCcccc-------cc--chhhhHHHHHhcChhhhc---------CCCCCC--EEEEEeCCCCCCCCCHHHHHHHHHHHH
Q 004456 643 PFGFQTE-------FR--TLWEATNVYIEMSPITHA---------NKIKKP--ILIIHGEVDDKVGLFPMQAERFFDALK 702 (752)
Q Consensus 643 ~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~---------~~~~~P--~li~~G~~D~~v~~~~~~~~~~~~~l~ 702 (752)
....... .. ..-...+.+...+....+ .....| .+.++...|..+. +.+..++.++-+
T Consensus 231 ~~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~p~~~~~~g~ 308 (522)
T 1ukc_A 231 VSEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDELYNAFDAGN 308 (522)
T ss_dssp SGGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCCHHHHHhcCC
Confidence 1000000 00 000011112222211100 111233 4556677776554 455556665544
Q ss_pred hCCCcEEEEEeCCCCccCC
Q 004456 703 GHGALSRLVLLPFEHHVYA 721 (752)
Q Consensus 703 ~~~~~~~~~~~~~~~H~~~ 721 (752)
..++++-+-...+.+|.+.
T Consensus 309 ~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 309 FIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp SCCCCEEEEEETBGGGGTS
T ss_pred CCCCCEEEEeecchhHHhh
Confidence 4556666666778888765
No 390
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4.1e-08 Score=101.63 Aligned_cols=184 Identities=10% Similarity=0.030 Sum_probs=114.9
Q ss_pred eeceeEecC--CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SP--DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
.+....|+| +|++|+..+ ....|.++++.+++..++...... ..+..+.|+|||+.|+..+.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s----------~dg~i~~wd~~~~~~~~~~~~~~~---~~i~~~~~~pdg~~lasg~~--- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWAD----------NRGTIGFQSYEDDSQYIVHSAKSD---VEYSSGVLHKDSLLLALYSP--- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEE----------TTCCEEEEESSSSCEEEEECCCSS---CCCCEEEECTTSCEEEEECT---
T ss_pred CEEEEEcCCCCCCCEEEEEe----------CCCcEEEEECCCCcEEEEEecCCC---CceEEEEECCCCCEEEEEcC---
Confidence 588899999 999998763 346899999998887554322221 13678899999998887532
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-c-cccCC-c-cceeccccCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-A-KDFGT-P-AVYTAVEPSP 184 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~-~~l~~-~-~~~~~~~~Sp 184 (752)
.+.|.++|+ +++ . ..+.. + ..+..++|||
T Consensus 191 ----------------------------------------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 191 ----------------------------------------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ----------------------------------------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ----------------------------------------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC
Confidence 157899999 664 3 35555 4 8899999999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEec
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~ 263 (752)
||++|+..+ +. .+.+||+...+... +...... ..+ .....++|+|+|++ |+..+.
T Consensus 225 ~g~~l~s~~-~~-------------~v~iwd~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~g~~-l~~~s~- 280 (343)
T 3lrv_A 225 NGYWMVVEC-DQ-------------TVVCFDLRKDVGTLAYPTYTIP-EFK-------TGTVTYDIDDSGKN-MIAYSN- 280 (343)
T ss_dssp TSSEEEEEE-SS-------------BEEEEETTSSTTCBSSCCCBC-------------CCEEEEECTTSSE-EEEEET-
T ss_pred CCCEEEEEe-CC-------------eEEEEEcCCCCcceeecccccc-ccc-------ccceEEEECCCCCE-EEEecC-
Confidence 999998886 32 69999998654321 1111000 000 00124899999997 555431
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeec---CCceEEEee
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNET 317 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~sp---Dg~~l~~~~ 317 (752)
..+.+.+++.. .+...... ..+..+.|+| +++.+++..
T Consensus 281 ----------~d~~i~v~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 281 ----------ESNSLTIYKFD--KKTKNWTK----DEESALCLQSDTADFTDMDVVC 321 (343)
T ss_dssp ----------TTTEEEEEEEC--TTTCSEEE----EEEEECCC----CCCCEEEEEE
T ss_pred ----------CCCcEEEEEEc--ccccceEe----cCceeEecCccccccceeEEEe
Confidence 12356666552 11222222 3345567777 777777765
No 391
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=9.6e-08 Score=98.28 Aligned_cols=240 Identities=13% Similarity=0.051 Sum_probs=140.3
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
.+|+++++.. ++.+++.. .....+....|+|||+.++.... .......|++++.+++..+.+......
T Consensus 66 ~~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~------~~~~~~~i~~~d~~~~~~~~~~~~~~~- 133 (333)
T 2dg1_A 66 GNIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLG------DFKSTGGIFAATENGDNLQDIIEDLST- 133 (333)
T ss_dssp CEEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECT------TSSSCCEEEEECTTSCSCEEEECSSSS-
T ss_pred CEEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCC------CCCCCceEEEEeCCCCEEEEEEccCcc-
Confidence 4577777665 77666542 12235788999999986554321 001225899999998887643221110
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
...+..+.++|||+.+ ++....... .....||.++.
T Consensus 134 -~~~~~~i~~d~~g~l~-v~~~~~~~~------------------------------------------~~~~~l~~~~~ 169 (333)
T 2dg1_A 134 -AYCIDDMVFDSKGGFY-FTDFRGYST------------------------------------------NPLGGVYYVSP 169 (333)
T ss_dssp -CCCEEEEEECTTSCEE-EEECCCBTT------------------------------------------BCCEEEEEECT
T ss_pred -CCcccceEECCCCCEE-EEecccccc------------------------------------------CCCceEEEEeC
Confidence 1124577999999744 432210000 01257999998
Q ss_pred CC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC--CceeEEecCCCCCCCCCcccCCc
Q 004456 165 DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVRELCDLPPAEDIPVCYNSV 240 (752)
Q Consensus 165 ~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l~~~~~~~~~~~~~~~~ 240 (752)
++ +...+... .....++|+|||+.|++..... ..|++|+++ ++....+...... .+..
T Consensus 170 ~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~------------~~i~~~d~~~~g~~~~~~~~~~~~-----~~~~- 231 (333)
T 2dg1_A 170 DFRTVTPIIQNISVANGIALSTDEKVLWVTETTA------------NRLHRIALEDDGVTIQPFGATIPY-----YFTG- 231 (333)
T ss_dssp TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEECTTSSSEEEEEEEEEE-----ECCS-
T ss_pred CCCEEEEeecCCCcccceEECCCCCEEEEEeCCC------------CeEEEEEecCCCcCcccccceEEE-----ecCC-
Confidence 54 66555443 4567899999999998875432 378889884 3322221100000 0000
Q ss_pred cccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeeccc------ceeeeeeecCCceEE
Q 004456 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFRSVSWCDDSLALV 314 (752)
Q Consensus 241 ~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~------~~~~~~~spDg~~l~ 314 (752)
...+..+.+++||+ +++... ..+.|++++. ++.....+..... ....++|+|||+.|+
T Consensus 232 ~~~~~~i~~d~~G~--l~v~~~-----------~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 232 HEGPDSCCIDSDDN--LYVAMY-----------GQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp SSEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred CCCCCceEECCCCC--EEEEEc-----------CCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 01245689999997 555431 2346888887 4444444433222 467889999998888
Q ss_pred Eeeecc--cCceeEEEEcCCCC
Q 004456 315 NETWYK--TSQTRTWLVCPGSK 334 (752)
Q Consensus 315 ~~~~~~--~~~~~l~~~~~~~~ 334 (752)
++.... .....||.+++...
T Consensus 296 v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 296 ICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp EEEECGGGTCCEEEEEEECSSC
T ss_pred EEeCccCCCCCceEEEEecccC
Confidence 776432 23467999987653
No 392
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=6.1e-08 Score=99.41 Aligned_cols=227 Identities=11% Similarity=0.030 Sum_probs=137.3
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+.++..+ ++.+.+. .+ ..+....|+|||+.++.. . ..|++++.++++.+.+.......
T Consensus 71 ~~i~~~d~~~----~~~~~~~-~~--~~v~~i~~~~dg~l~v~~----------~--~gl~~~d~~~g~~~~~~~~~~~~ 131 (326)
T 2ghs_A 71 RELHELHLAS----GRKTVHA-LP--FMGSALAKISDSKQLIAS----------D--DGLFLRDTATGVLTLHAELESDL 131 (326)
T ss_dssp TEEEEEETTT----TEEEEEE-CS--SCEEEEEEEETTEEEEEE----------T--TEEEEEETTTCCEEEEECSSTTC
T ss_pred CEEEEEECCC----CcEEEEE-CC--CcceEEEEeCCCeEEEEE----------C--CCEEEEECCCCcEEEEeeCCCCC
Confidence 3566677655 6655554 33 247788999999877652 1 35999999988877765332111
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
....+..+.|+|||+ |++........ .....||+++
T Consensus 132 ~~~~~~~i~~d~~G~-l~v~~~~~~~~------------------------------------------~~~~~l~~~~- 167 (326)
T 2ghs_A 132 PGNRSNDGRMHPSGA-LWIGTMGRKAE------------------------------------------TGAGSIYHVA- 167 (326)
T ss_dssp TTEEEEEEEECTTSC-EEEEEEETTCC------------------------------------------TTCEEEEEEE-
T ss_pred CCCCCCCEEECCCCC-EEEEeCCCcCC------------------------------------------CCceEEEEEe-
Confidence 011245789999998 44442210000 0125799998
Q ss_pred CCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC--Cc-ee---EEecCCCCCCCCCccc
Q 004456 165 DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GK-LV---RELCDLPPAEDIPVCY 237 (752)
Q Consensus 165 ~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~-~~---~~l~~~~~~~~~~~~~ 237 (752)
+|+.+.+... .....++|||||+.|++..... ..|++++++ ++ .. +.+......
T Consensus 168 ~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~------------~~I~~~d~~~~~Gl~~~~~~~~~~~~~~------- 228 (326)
T 2ghs_A 168 KGKVTKLFADISIPNSICFSPDGTTGYFVDTKV------------NRLMRVPLDARTGLPTGKAEVFIDSTGI------- 228 (326)
T ss_dssp TTEEEEEEEEESSEEEEEECTTSCEEEEEETTT------------CEEEEEEBCTTTCCBSSCCEEEEECTTS-------
T ss_pred CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCC------------CEEEEEEcccccCCcccCceEEEECCCC-------
Confidence 7766655443 4566899999999998875432 478999875 33 21 112111100
Q ss_pred CCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeee-cCCceEEEe
Q 004456 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNE 316 (752)
Q Consensus 238 ~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~s-pDg~~l~~~ 316 (752)
...+..+.+++||+ |++... ..+.|++++. ++.....+......+..++|+ ||++.|+++
T Consensus 229 ---~~~p~gi~~d~~G~--lwva~~-----------~~~~v~~~d~---~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 229 ---KGGMDGSVCDAEGH--IWNARW-----------GEGAVDRYDT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ---SSEEEEEEECTTSC--EEEEEE-----------TTTEEEEECT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred ---CCCCCeeEECCCCC--EEEEEe-----------CCCEEEEECC---CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 11245688999996 555531 2246888887 444444454444467889998 999888776
Q ss_pred eeccc----------CceeEEEEcCC
Q 004456 317 TWYKT----------SQTRTWLVCPG 332 (752)
Q Consensus 317 ~~~~~----------~~~~l~~~~~~ 332 (752)
..... ..+.||++++.
T Consensus 290 ~~~~~~~~~~~~~~p~~g~~~~~~~~ 315 (326)
T 2ghs_A 290 SAREHLDDDAITANPQHGLTFELGIE 315 (326)
T ss_dssp EBCTTCCHHHHHHCTTTTCEEECSSC
T ss_pred ecCCCCChhHhccCCCCceEEEEeCC
Confidence 63321 22457777643
No 393
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.97 E-value=5.8e-07 Score=96.60 Aligned_cols=301 Identities=13% Similarity=0.035 Sum_probs=165.8
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
...|.++++.. ++...... .....+....|+ ++.|+.. .....|.++++++++..........
T Consensus 138 dg~i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~--~~~l~s~----------~~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 138 DNTLKVWSAVT----GKCLRTLV-GHTGGVWSSQMR--DNIIISG----------STDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp TSCEEEEETTT----CCEEEECC-CCSSCEEEEEEE--TTEEEEE----------ETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCcEEEEECCC----CcEEEEEc-CCCCCEEEEEec--CCEEEEE----------eCCCeEEEEECCcCcEEEEECCCCC
Confidence 34567777765 54332221 122246667776 5566664 3346788888888765443322221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+..+.|+ ++.|+..+. .+.|.+++
T Consensus 201 ----~v~~~~~~--~~~l~s~s~-------------------------------------------------dg~i~~wd 225 (445)
T 2ovr_B 201 ----TVRCMHLH--EKRVVSGSR-------------------------------------------------DATLRVWD 225 (445)
T ss_dssp ----CEEEEEEE--TTEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred ----cEEEEEec--CCEEEEEeC-------------------------------------------------CCEEEEEE
Confidence 34556664 555665432 16788999
Q ss_pred c-CCCc-cccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCc
Q 004456 164 L-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (752)
Q Consensus 164 ~-~G~~-~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (752)
+ +++. ..+..+ ..+..+.| ||+.|+....+. .+.+||+.+++........
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-------------~i~iwd~~~~~~~~~~~~~------------ 278 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF-------------MVKVWDPETETCLHTLQGH------------ 278 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS-------------CEEEEEGGGTEEEEEECCC------------
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC-------------EEEEEECCCCcEeEEecCC------------
Confidence 8 5643 333333 66667777 888888876553 7999999876543322211
Q ss_pred cccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecc
Q 004456 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (752)
Q Consensus 241 ~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 320 (752)
...+..+.| ||+. ++... ..+.+.++|+. .+.....+......+..+ +++++.|+.+.
T Consensus 279 ~~~v~~~~~--~~~~-l~~~~------------~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~--- 336 (445)
T 2ovr_B 279 TNRVYSLQF--DGIH-VVSGS------------LDTSIRVWDVE--TGNCIHTLTGHQSLTSGM--ELKDNILVSGN--- 336 (445)
T ss_dssp SSCEEEEEE--CSSE-EEEEE------------TTSCEEEEETT--TCCEEEEECCCCSCEEEE--EEETTEEEEEE---
T ss_pred CCceEEEEE--CCCE-EEEEe------------CCCeEEEEECC--CCCEEEEEcCCcccEEEE--EEeCCEEEEEe---
Confidence 111445566 7775 55443 34478888883 222223333333344444 45677777765
Q ss_pred cCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEE
Q 004456 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (752)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 400 (752)
..+.|.++++.++ +.......... ...+..+.+.++++|+..+.+ | .|.+|
T Consensus 337 -~dg~i~vwd~~~~--~~~~~~~~~~~-----~~~~v~~~~~~~~~l~s~~~d-------------g--------~v~iw 387 (445)
T 2ovr_B 337 -ADSTVKIWDIKTG--QCLQTLQGPNK-----HQSAVTCLQFNKNFVITSSDD-------------G--------TVKLW 387 (445)
T ss_dssp -TTSCEEEEETTTC--CEEEEECSTTS-----CSSCEEEEEECSSEEEEEETT-------------S--------EEEEE
T ss_pred -CCCeEEEEECCCC--cEEEEEccCCC-----CCCCEEEEEECCCEEEEEeCC-------------C--------eEEEE
Confidence 3345888888764 22222111000 012222233456777766522 1 59999
Q ss_pred ecCCCceeEEe-eccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 004456 401 DINTGSKERIW-ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (752)
Q Consensus 401 d~~~g~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~ 461 (752)
|+.+++..... ..........+. .++|+|++..++....+......++++|...
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~-------~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVW-------RIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEE-------EEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ECCCCceeeeeeccccCCCCceEE-------EEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99988764433 111110001122 2588999887777665555567788888764
No 394
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.96 E-value=9.2e-08 Score=98.04 Aligned_cols=226 Identities=11% Similarity=0.024 Sum_probs=132.3
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
...|.|+||++.++|+.. ....|++++.++++.+.+.. +. .+..+.|+|||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~---------~~~~i~~~d~~~~~~~~~~~-~~-----~v~~i~~~~dg~l~v~~-~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI---------LERELHELHLASGRKTVHAL-PF-----MGSALAKISDSKQLIAS-D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEG---------GGTEEEEEETTTTEEEEEEC-SS-----CEEEEEEEETTEEEEEE-T------
T ss_pred CcCCeEeCCCCEEEEEEC---------CCCEEEEEECCCCcEEEEEC-CC-----cceEEEEeCCCeEEEEE-C------
Confidence 467999999999988642 24689999999887766532 22 35678999999966643 1
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc------cceeccccCCC
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~------~~~~~~~~SpD 185 (752)
..|+++++ +|+.+.+... ..+..+.++||
T Consensus 109 --------------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 109 --------------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS 144 (326)
T ss_dssp --------------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred --------------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC
Confidence 24888888 5665544321 34668999999
Q ss_pred CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 186 Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
|+. ++....... ......|+.++ + ++.+.+.... .....++|+|||+. ||++..
T Consensus 145 G~l-~v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~-lyv~~~--- 198 (326)
T 2ghs_A 145 GAL-WIGTMGRKA------ETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTT-GYFVDT--- 198 (326)
T ss_dssp SCE-EEEEEETTC------CTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCE-EEEEET---
T ss_pred CCE-EEEeCCCcC------CCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCE-EEEEEC---
Confidence 984 454332110 01124688888 4 4444432210 01346899999997 777742
Q ss_pred CCCccccCccceEEeccCCCCCCC-C---CeEEee---cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccc
Q 004456 266 GDANVEVSPRDIIYTQPAEPAEGE-K---PEILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~l~~---~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 338 (752)
..+.|++++.+.. ++ . .+.+.. .......+++++||+ |+++... ...|++++.++. ..
T Consensus 199 --------~~~~I~~~d~~~~-~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~---~~~v~~~d~~g~--~~ 263 (326)
T 2ghs_A 199 --------KVNRLMRVPLDAR-TGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWG---EGAVDRYDTDGN--HI 263 (326)
T ss_dssp --------TTCEEEEEEBCTT-TCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEET---TTEEEEECTTCC--EE
T ss_pred --------CCCEEEEEEcccc-cCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeC---CCEEEEECCCCC--EE
Confidence 2346888876211 22 2 223322 123455678889996 4333322 236999998542 11
Q ss_pred eeccccccccccCCCCCCceeeC-CCCCeEEEeee
Q 004456 339 RVLFDRVFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (752)
Q Consensus 339 ~~l~~~~~~~~~~~~~~p~~~~s-~dg~~l~~~~~ 372 (752)
..+.. .... .-.++|+ +|++.|+++..
T Consensus 264 ~~i~~-~~~~------~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 264 ARYEV-PGKQ------TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEC-SCSB------EEEEEEESTTSCEEEEEEB
T ss_pred EEEEC-CCCC------cEEEEEecCCCCEEEEEec
Confidence 22211 1100 0125577 88888877763
No 395
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.95 E-value=1.4e-07 Score=93.56 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=145.2
Q ss_pred CCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccc-cccccceEEecCCcEEEEEecCCCCCCCCCccCCC
Q 004456 42 GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL-NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (752)
Q Consensus 42 G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~-~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 120 (752)
|++|.|+. ...|+.++++++..+.+...+.... ......++|+|+++.|+++..
T Consensus 1 ~~~l~~~~-----------~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~-------------- 55 (267)
T 1npe_A 1 GTHLLFAQ-----------TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI-------------- 55 (267)
T ss_dssp CEEEEEEE-----------EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--------------
T ss_pred CcEEEEEc-----------CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--------------
Confidence 56777742 2589999998876543210000000 002357899999888988722
Q ss_pred CCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccC-Cc-cceeccccCCCCceEEEEecccC
Q 004456 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRP 197 (752)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~ 197 (752)
....|++++++| ....+. .. .....++++|+++.|++.....
T Consensus 56 ----------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~- 100 (267)
T 1npe_A 56 ----------------------------------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQL- 100 (267)
T ss_dssp ----------------------------------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTT-
T ss_pred ----------------------------------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCC-
Confidence 115799999976 333332 22 5677899999999998876543
Q ss_pred ccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccce
Q 004456 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (752)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~ 277 (752)
..|.++++++...+.+..... ..+..++++|++.+ ||++... .....
T Consensus 101 -----------~~I~~~~~~g~~~~~~~~~~~------------~~P~~i~vd~~~g~-lyv~~~~---------~~~~~ 147 (267)
T 1npe_A 101 -----------DRIEVAKMDGTQRRVLFDTGL------------VNPRGIVTDPVRGN-LYWTDWN---------RDNPK 147 (267)
T ss_dssp -----------TEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTTE-EEEEECC---------SSSCE
T ss_pred -----------CEEEEEEcCCCCEEEEEECCC------------CCccEEEEeeCCCE-EEEEECC---------CCCcE
Confidence 478889988765544432210 12568999998776 8887521 01347
Q ss_pred EEeccCCCCCCCCCeEEeec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCC
Q 004456 278 IYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 356 (752)
Q Consensus 278 l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p 356 (752)
|++++. ++...+.+... ......++++||++.|+++.. ....|+++++++. ....+.+. . ..|
T Consensus 148 I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~---~~~~I~~~~~~g~--~~~~~~~~-~-------~~P 211 (267)
T 1npe_A 148 IETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA---GTHRAECLNPAQP--GRRKVLEG-L-------QYP 211 (267)
T ss_dssp EEEEET---TSCCCEEEECTTCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTEE--EEEEEEEC-C-------CSE
T ss_pred EEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC---CCCEEEEEecCCC--ceEEEecC-C-------CCc
Confidence 888777 55555555422 234567889999988887652 2347999998763 22222211 0 112
Q ss_pred ceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEE
Q 004456 357 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (752)
Q Consensus 357 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (752)
. ..+.|+.+|+++.. ....|+++|.++|+....
T Consensus 212 ~-gi~~d~~~lyva~~--------------------~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 212 F-AVTSYGKNLYYTDW--------------------KTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp E-EEEEETTEEEEEET--------------------TTTEEEEEETTTTEEEEE
T ss_pred e-EEEEeCCEEEEEEC--------------------CCCeEEEEeCCCCCceEE
Confidence 1 12345566666541 123699999988876443
No 396
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.95 E-value=1.5e-09 Score=118.69 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=88.4
Q ss_pred EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCC-CCCCCCCC
Q 004456 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PIIGEGDK 572 (752)
Q Consensus 495 ~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~-~~~g~g~~ 572 (752)
+...+|.|....+. .++|+||++|||++..++.. .+.. ..|+ ..|++|+.++|+ +..|+...
T Consensus 99 l~lnv~~P~~~~~~--~~~Pv~v~iHGG~~~~g~~~--------~~~~------~~la~~~g~vvv~~nYRlg~~gf~~~ 162 (542)
T 2h7c_A 99 LYLNIYTPADLTKK--NRLPVMVWIHGGGLMVGAAS--------TYDG------LALAAHENVVVVTIQYRLGIWGFFST 162 (542)
T ss_dssp CEEEEEECSCTTSC--CCEEEEEEECCSTTTSCCST--------TSCC------HHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred cEEEEEECCCCCCC--CCCCEEEEECCCcccCCCcc--------ccCH------HHHHhcCCEEEEecCCCCccccCCCC
Confidence 55567889764322 35899999999987644321 1211 1344 489999998886 22233222
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCC
Q 004456 573 LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 638 (752)
Q Consensus 573 ~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~--~p~~~~~~v~~~~~~~ 638 (752)
..........+.|..++++|+++.. ..|++||.|+|+|+||++++.++.. .+..|+++|+.+|...
T Consensus 163 ~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 163 GDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 1111112334678999999998852 4789999999999999999998876 3578999999998754
No 397
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.93 E-value=4.1e-09 Score=104.89 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=55.9
Q ss_pred hhHHHHHhC--CcEEEecCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004456 546 TSSLIFLAR--RFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 622 (752)
Q Consensus 546 ~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 622 (752)
.....|.+. |+.|+++ +. |+|.+... ..+.....+++.++++++...... .+++.++||||||.++..++.+
T Consensus 26 ~~~~~L~~~~~g~~v~~~---d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~ 100 (279)
T 1ei9_A 26 AIKKMVEKKIPGIHVLSL---EI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQR 100 (279)
T ss_dssp HHHHHHHHHSTTCCEEEC---CC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEE---Ee-CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHH
Confidence 455566654 8899994 33 66543210 111112234444555555442212 2689999999999999999999
Q ss_pred CCCc-eeEEEEccCCC
Q 004456 623 APHL-FCCGIARSGSY 637 (752)
Q Consensus 623 ~p~~-~~~~v~~~~~~ 637 (752)
+|+. ++..|++++..
T Consensus 101 ~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 101 CPSPPMVNLISVGGQH 116 (279)
T ss_dssp CCSSCEEEEEEESCCT
T ss_pred cCCcccceEEEecCcc
Confidence 9984 99999887643
No 398
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.92 E-value=2.9e-07 Score=91.31 Aligned_cols=224 Identities=10% Similarity=0.065 Sum_probs=138.7
Q ss_pred cEEEEEccCC-Ccccc------CCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCC
Q 004456 157 AQLVLGSLDG-TAKDF------GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l------~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 228 (752)
..|++++++| ..+.+ ... .....++|+|+++.|++..... ..|++++++++..+.+....
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE------------PSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT------------TEEEEEESSSCCCEEEECTT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCC------------CEEEEEecCCCCcEEEEECC
Confidence 5799999977 33221 111 4556899999999999986543 47899999887654443211
Q ss_pred CCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc-cceeeeeee
Q 004456 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWC 307 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~s 307 (752)
. ..+..++++|++.. ||++.. ..+.|++++. ++...+.+.... .....++++
T Consensus 78 ~------------~~p~~ia~d~~~~~-lyv~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~vd 130 (267)
T 1npe_A 78 L------------GSPEGIALDHLGRT-IFWTDS-----------QLDRIEVAKM---DGTQRRVLFDTGLVNPRGIVTD 130 (267)
T ss_dssp C------------CCEEEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred C------------CCccEEEEEecCCe-EEEEEC-----------CCCEEEEEEc---CCCCEEEEEECCCCCccEEEEe
Confidence 0 12568999998887 888752 2347888887 555555554332 456778899
Q ss_pred cCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCC
Q 004456 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (752)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g 387 (752)
|++..|+++.... ....|+++++++. ....+....... ...+++++++++|+++..
T Consensus 131 ~~~g~lyv~~~~~-~~~~I~~~~~dg~--~~~~~~~~~~~~------P~gia~d~~~~~lyv~d~--------------- 186 (267)
T 1npe_A 131 PVRGNLYWTDWNR-DNPKIETSHMDGT--NRRILAQDNLGL------PNGLTFDAFSSQLCWVDA--------------- 186 (267)
T ss_dssp TTTTEEEEEECCS-SSCEEEEEETTSC--CCEEEECTTCSC------EEEEEEETTTTEEEEEET---------------
T ss_pred eCCCEEEEEECCC-CCcEEEEEecCCC--CcEEEEECCCCC------CcEEEEcCCCCEEEEEEC---------------
Confidence 9888787765321 2357999988763 223332111110 112678999988988862
Q ss_pred CCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 388 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
....|+++|++++..+.+.... . ....+..|++.|+++... ...|+++|..+++..
T Consensus 187 -----~~~~I~~~~~~g~~~~~~~~~~-~-------------~P~gi~~d~~~lyva~~~---~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 187 -----GTHRAECLNPAQPGRRKVLEGL-Q-------------YPFAVTSYGKNLYYTDWK---TNSVIAMDLAISKEM 242 (267)
T ss_dssp -----TTTEEEEEETTEEEEEEEEECC-C-------------SEEEEEEETTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred -----CCCEEEEEecCCCceEEEecCC-C-------------CceEEEEeCCEEEEEECC---CCeEEEEeCCCCCce
Confidence 2236999998765444433211 0 112344567777775433 346899998877644
No 399
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=1.9e-06 Score=88.99 Aligned_cols=285 Identities=7% Similarity=-0.033 Sum_probs=136.8
Q ss_pred cEEEEEccC-C----CccccCC------c---cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeE
Q 004456 157 AQLVLGSLD-G----TAKDFGT------P---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR 222 (752)
Q Consensus 157 ~~i~~~~~~-G----~~~~l~~------~---~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 222 (752)
+.||++|+. - +..+..+ . .....+..+||| |+++..... .+..++.+.++|..+.+..
T Consensus 106 ~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~------~g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 106 SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNE------EGEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEET------TSCSCCEEEEECTTTCCEE
T ss_pred CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCc------CCCCCCeEEEEECCCCeEE
Confidence 679999983 2 1222221 1 134466899999 666655542 2334568999999987765
Q ss_pred EecCCCCC-CCCCcccCCccccccceeeeeCCCceEEEEEecc-------CCCCcc-ccCccceEEeccCCCCCCCCCe-
Q 004456 223 ELCDLPPA-EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD-------RGDANV-EVSPRDIIYTQPAEPAEGEKPE- 292 (752)
Q Consensus 223 ~l~~~~~~-~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~-------~~~~~~-~~~~~~~l~~~~~~~~~~~~~~- 292 (752)
.-...... ... ..++.|+||++ +++++... +-..+. .....++|+++|. ++++..
T Consensus 178 ~~~~~~~~~~~~----------~Yd~~~~p~~~--~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~---~~~k~~~ 242 (462)
T 2ece_A 178 GKWEIDRGDQYL----------AYDFWWNLPNE--VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL---RKRKRIH 242 (462)
T ss_dssp EECCSBCTTCCC----------CCCEEEETTTT--EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---TTTEEEE
T ss_pred EEEccCCCCccc----------cceEEECCCCC--EEEEccCcCccccccccchhhhhhccCCEEEEEEC---CCCcEee
Confidence 54432211 111 23689999999 45554311 101100 0034678999998 333322
Q ss_pred EEeec-c-cceeee--eeecCCceEEEeeec--ccCceeEEEEcCCCCCccceecc---cccccccc---------CCCC
Q 004456 293 ILHKL-D-LRFRSV--SWCDDSLALVNETWY--KTSQTRTWLVCPGSKDVAPRVLF---DRVFENVY---------SDPG 354 (752)
Q Consensus 293 ~l~~~-~-~~~~~~--~~spDg~~l~~~~~~--~~~~~~l~~~~~~~~~~~~~~l~---~~~~~~~~---------~~~~ 354 (752)
.+..+ . .....+ +++|||+.++..... ....+.|+++..+++..+...+. ........ ....
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 23322 1 122333 459999977776540 00122354433332211111111 00000000 0001
Q ss_pred CCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCC-CceeEEeecc-chhh--hh--ceeeeecC
Q 004456 355 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-GSKERIWESN-REKY--FE--TAVALVFG 428 (752)
Q Consensus 355 ~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-g~~~~l~~~~-~~~~--~~--~~~~~~~~ 428 (752)
.-.+..|+||++|+++... ...|.++|+.. ++.+.+-... +..+ .+ .-..+..+
T Consensus 323 pa~I~lS~DGrfLYVSnrg--------------------~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWG--------------------IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp CCCEEECTTSCEEEEEETT--------------------TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred eeEEEECCCCCEEEEEeCC--------------------CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 1235689999999888732 12477777643 3333221110 0000 00 00001122
Q ss_pred CcceecccCCCEEEEEEe-------c---CCCCcEEEEE--ECCCCCeeEeecCCCCCCCcCCCceEEEEEE
Q 004456 429 QGEEDINLNQLKILTSKE-------S---KTEITQYHIL--SWPLKKSSQITNFPHPYPTLASLQKEMIKYQ 488 (752)
Q Consensus 429 ~~~~~~s~d~~~l~~~~~-------~---~~~~~~i~~~--d~~~g~~~~lt~~~~~~~~~~~~~~~~~~~~ 488 (752)
...+.+||||++|+++.+ - ......++.+ |.++| .. ++. ....++......+++|+
T Consensus 383 Pr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~-~~~--~f~vdf~~~~~h~~r~~ 450 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE-IDK--EFFVDFGEARSHQVRLS 450 (462)
T ss_dssp CCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE-EEE--EEEEECTTSEEEEEEET
T ss_pred CCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce-eCC--CEEeecccCcceeeecC
Confidence 345789999999988762 0 1223457655 55667 44 332 12223333455555554
No 400
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.91 E-value=8.9e-08 Score=96.76 Aligned_cols=219 Identities=11% Similarity=-0.002 Sum_probs=132.1
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~ 84 (752)
..|+.++..+ ++.+.+. .+ ..+....++|||+.++- . ...|++++.++++.+.+.......
T Consensus 35 ~~i~~~d~~~----~~~~~~~-~~--~~~~~i~~~~dG~l~v~-----------~-~~~l~~~d~~~g~~~~~~~~~~~~ 95 (297)
T 3g4e_A 35 KKVCRWDSFT----KQVQRVT-MD--APVSSVALRQSGGYVAT-----------I-GTKFCALNWKEQSAVVLATVDNDK 95 (297)
T ss_dssp TEEEEEETTT----CCEEEEE-CS--SCEEEEEEBTTSSEEEE-----------E-TTEEEEEETTTTEEEEEEECCTTC
T ss_pred CEEEEEECCC----CcEEEEe-CC--CceEEEEECCCCCEEEE-----------E-CCeEEEEECCCCcEEEEEecCCCC
Confidence 3456666655 6554443 22 34778899999994433 1 257999999988877665432211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
....+..+.++|||+ |++......... . . . ......||.++.
T Consensus 96 ~~~~~~di~~d~dG~-l~~~~~~~~~~~--------~-----~------------------~------~~~~~~l~~~d~ 137 (297)
T 3g4e_A 96 KNNRFNDGKVDPAGR-YFAGTMAEETAP--------A-----V------------------L------ERHQGALYSLFP 137 (297)
T ss_dssp SSEEEEEEEECTTSC-EEEEEEECCSBT--------T-----B------------------C------CTTCEEEEEECT
T ss_pred CCCCCCCEEECCCCC-EEEecCCccccc--------c-----c------------------c------cCCCcEEEEEEC
Confidence 111245678999999 555432110000 0 0 0 001267999998
Q ss_pred CCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC--Ccee---EEecCCCCCCCCCcccC
Q 004456 165 DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLV---RELCDLPPAEDIPVCYN 238 (752)
Q Consensus 165 ~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~~---~~l~~~~~~~~~~~~~~ 238 (752)
+|+...+... .....++|||||+.|++..... ..|++++++ ++.. +.+......
T Consensus 138 ~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~-------- 197 (297)
T 3g4e_A 138 DHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS------------YSVDAFDYDLQTGQISNRRSVYKLEKE-------- 197 (297)
T ss_dssp TSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG------------TEEEEEEECTTTCCEEEEEEEEECCGG--------
T ss_pred CCCEEEEeeccccccceEEcCCCCEEEEecCCC------------CcEEEEeccCCCCcccCcEEEEECCCC--------
Confidence 8866555444 5667899999999998876543 478888763 3322 222221110
Q ss_pred CccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEeecccceeeeeee-cCCceEEEe
Q 004456 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWC-DDSLALVNE 316 (752)
Q Consensus 239 ~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~~~s-pDg~~l~~~ 316 (752)
...+..+++++||+ |++... ..+.|++++. ++++. ..+......+..++|+ ||++.|+++
T Consensus 198 --~~~p~g~~~d~~G~--lwva~~-----------~~~~v~~~d~---~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 198 --EQIPDGMCIDAEGK--LWVACY-----------NGGRVIRLDP---VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp --GCEEEEEEEBTTSC--EEEEEE-----------TTTEEEEECT---TTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred --CCCCCeeEECCCCC--EEEEEc-----------CCCEEEEEcC---CCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 12255789999996 665542 2346888887 43443 3444444567889998 899988887
Q ss_pred ee
Q 004456 317 TW 318 (752)
Q Consensus 317 ~~ 318 (752)
+.
T Consensus 260 ~~ 261 (297)
T 3g4e_A 260 CA 261 (297)
T ss_dssp EB
T ss_pred cC
Confidence 63
No 401
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.91 E-value=1.6e-09 Score=114.90 Aligned_cols=163 Identities=9% Similarity=0.007 Sum_probs=103.0
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEA 588 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~ 588 (752)
..|+||++||.+.. . ...+....+..|++ .||.|++ .+.+|+|.+.... ........|+.+
T Consensus 69 ~~~~vvllHG~~~s-----------~--~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~g~s~~~~~~~~~~~~~~dl~~ 132 (432)
T 1gpl_A 69 NRKTRFIIHGFTDS-----------G--ENSWLSDMCKNMFQVEKVNCIC---VDWKGGSKAQYSQASQNIRVVGAEVAY 132 (432)
T ss_dssp TSEEEEEECCTTCC-----------T--TSHHHHHHHHHHHHHCCEEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCC-----------C--CchHHHHHHHHHHhcCCcEEEE---EECccccCccchhhHhhHHHHHHHHHH
Confidence 36999999995311 0 00111114456665 7999999 4556666553211 123345678888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccccchhhhHHHHHhcChhhh
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITH 668 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (752)
.++++.++..++.+++.|+||||||++|+.++.++|++++.++.++|........ ++...
T Consensus 133 ~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~--------------------~~~~~ 192 (432)
T 1gpl_A 133 LVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT--------------------PEEVR 192 (432)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC--------------------CTTTS
T ss_pred HHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC--------------------Chhhc
Confidence 9999976544567899999999999999999999999999999888753211000 00000
Q ss_pred c-CCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCcc
Q 004456 669 A-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 719 (752)
Q Consensus 669 ~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 719 (752)
+ .....++.+||+..|.+|| ... +...+.. ..+..||++||.
T Consensus 193 l~~~da~~V~vIHt~~d~lVP--~~~----~g~~~~l---g~~dfypngg~~ 235 (432)
T 1gpl_A 193 LDPSDAKFVDVIHTDISPILP--SLG----FGMSQKV---GHMDFFPNGGKD 235 (432)
T ss_dssp CCGGGSSEEEEECSCCSCHHH--HCC----CBCSSCC---SSEEEEEGGGSS
T ss_pred cCcCCCceEEEEEcCCccccc--ccc----ccccccc---cceEEccCCCCC
Confidence 0 1123689999999999887 300 0001111 246678888885
No 402
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.91 E-value=3.2e-09 Score=114.70 Aligned_cols=128 Identities=20% Similarity=0.143 Sum_probs=89.5
Q ss_pred EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCC-cEEEecCCCCC-CCCCCC
Q 004456 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPI-IGEGDK 572 (752)
Q Consensus 495 ~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~~~-~g~g~~ 572 (752)
+...+|.|.. . ..++|+||++|||++..++... . ......|+++| ++|+.++|+-. .|++..
T Consensus 85 l~l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~~--------~----~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~ 148 (498)
T 2ogt_A 85 LYLNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGSS--------P----WYDGTAFAKHGDVVVVTINYRMNVFGFLHL 148 (498)
T ss_dssp CEEEEEESCS--S--SCCEEEEEEECCSTTTSCCTTC--------G----GGCCHHHHHHHTCEEEEECCCCHHHHCCCC
T ss_pred cEEEEEecCC--C--CCCCcEEEEEcCCccCCCCCCC--------C----cCCHHHHHhCCCEEEEeCCCcCchhhccCc
Confidence 5556678863 1 2358999999999876433221 0 11235667666 99999888632 244433
Q ss_pred CC-----CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004456 573 LP-----NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 638 (752)
Q Consensus 573 ~~-----~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~~ 638 (752)
.. ........+.|...+++|+++.. ..|+++|.|+|+|+||++++.++... ...|+++|+.+|...
T Consensus 149 ~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 149 GDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred hhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 21 11234566889999999998863 36899999999999999999888753 467999999999754
No 403
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.90 E-value=2.3e-07 Score=95.17 Aligned_cols=229 Identities=7% Similarity=-0.131 Sum_probs=131.0
Q ss_pred cEEEEEcc-CCCc-cccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCC
Q 004456 157 AQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDI 233 (752)
Q Consensus 157 ~~i~~~~~-~G~~-~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~ 233 (752)
..|.++|+ +++. .++........++++||| +|++..... ..|.++|+.+.+... +.......
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~------------~~v~~iD~~t~~~~~~i~~g~~~~-- 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWD------------YRIFIINPKTYEITGYIECPDMDM-- 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSC------------SEEEEEETTTTEEEEEEECTTCCT--
T ss_pred CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCC------------CeEEEEECCCCeEEEEEEcCCccc--
Confidence 57999999 6754 455434677788999999 676664221 479999998876553 32221000
Q ss_pred CcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceE
Q 004456 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLAL 313 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l 313 (752)
....+..+++ ++++ ||.+.. ...+.|.++|. ++.+.............++++|||+ +
T Consensus 129 ------~~~~p~~i~~--~~~~-lyv~~~----------~~~~~v~viD~---~t~~~~~~i~~g~~p~~i~~~~dG~-l 185 (328)
T 3dsm_A 129 ------ESGSTEQMVQ--YGKY-VYVNCW----------SYQNRILKIDT---ETDKVVDELTIGIQPTSLVMDKYNK-M 185 (328)
T ss_dssp ------TTCBCCCEEE--ETTE-EEEEEC----------TTCCEEEEEET---TTTEEEEEEECSSCBCCCEECTTSE-E
T ss_pred ------cCCCcceEEE--ECCE-EEEEcC----------CCCCEEEEEEC---CCCeEEEEEEcCCCccceEEcCCCC-E
Confidence 0012446677 5555 666631 02347889988 4444333333334456788999998 4
Q ss_pred EEeeeccc-------CceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccC
Q 004456 314 VNETWYKT-------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (752)
Q Consensus 314 ~~~~~~~~-------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (752)
++...... ....|+++|++++ +........... ..-.++++|||+.|++...
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~-----~p~~la~~~d~~~lyv~~~-------------- 244 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGD-----WPSEVQLNGTRDTLYWINN-------------- 244 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTC-----CCEEEEECTTSCEEEEESS--------------
T ss_pred EEEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCC-----CceeEEEecCCCEEEEEcc--------------
Confidence 45442220 0257999999874 222111111000 1112678999998887641
Q ss_pred CCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEe-cCCCCcEEEEEECCCCC
Q 004456 387 GFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE-SKTEITQYHILSWPLKK 463 (752)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~-~~~~~~~i~~~d~~~g~ 463 (752)
.|+++|+++++.......... ...+. .++++|+++.|+.+.. +......|+++|++ |+
T Consensus 245 ---------~v~~~d~~t~~~~~~~~~~~~--~~~p~-------gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 245 ---------DIWRMPVEADRVPVRPFLEFR--DTKYY-------GLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ---------SEEEEETTCSSCCSSCSBCCC--SSCEE-------EEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ---------EEEEEECCCCceeeeeeecCC--CCceE-------EEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 489999988875321100000 00112 2478997777766641 22345679999987 54
No 404
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.90 E-value=3.6e-09 Score=108.24 Aligned_cols=175 Identities=13% Similarity=0.113 Sum_probs=103.3
Q ss_pred hCCcEEEecCCCCCCCCCCC-----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----
Q 004456 553 ARRFAVLAGPSIPIIGEGDK-----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---- 623 (752)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~-----~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---- 623 (752)
..+|.|+. .+.+|+|.+ ...........+++.+.++.+.. ..++.++||||||.+|+.+|.+.
T Consensus 115 ~~~~~v~~---~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLA---VPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEE---ECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEE---ecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 47899999 455566654 33334456666666666654432 25799999999999999999875
Q ss_pred CCceeEEEEccCCCCCCCCcc-Cc-------------cccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCCCCC
Q 004456 624 PHLFCCGIARSGSYNKTLTPF-GF-------------QTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGL 689 (752)
Q Consensus 624 p~~~~~~v~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~ 689 (752)
++.++++|++++......... .+ .............|...........+++|+++++| .|..++
T Consensus 187 g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~- 264 (319)
T 2hfk_A 187 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD- 264 (319)
T ss_dssp SCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC-
T ss_pred CCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC-
Confidence 456899998886432110000 00 00000000000111110000123567899999999 999887
Q ss_pred CHHH-HHHHHHHHHhC-CCcEEEEEeCCCCccCCccccHHHHHHHHHHHHHHHhcC
Q 004456 690 FPMQ-AERFFDALKGH-GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 743 (752)
Q Consensus 690 ~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 743 (752)
... .. .+... ...++++.++ ++|.....+....+.+.+.+||.+....
T Consensus 265 -~~~~~~----~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~~~ 314 (319)
T 2hfk_A 265 -WQEERG----DWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDAIEGI 314 (319)
T ss_dssp -CCGGGC----CCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred -cccccc----chhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcCCC
Confidence 433 21 12222 2346888998 5897543347788889999999887643
No 405
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.88 E-value=2.1e-07 Score=96.78 Aligned_cols=195 Identities=11% Similarity=0.072 Sum_probs=113.3
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCc
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~ 255 (752)
.+....++++++.+++..... ..+.+||..+++......... .+..+.|++++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d------------~~v~iWd~~~~~~~~~~~~~~-------------~v~~v~~~~~~-- 112 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK------------EVVHIWDDVKKQDVSRIKVDA-------------PVKDLFLSREF-- 112 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST------------TEEEEEETTTTEEEEEEECSS-------------CEEEEEECSSE--
T ss_pred CeEEEEEcCCCCEEEEEECCc------------cEEEEEECCCCcEEEEEECCC-------------ceEEEEEcCCE--
Confidence 466778899999998775543 379999998775543222221 25678888764
Q ss_pred eEEEEEeccCCCCccccCccceEEeccCCCCCC-CCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
++... .+.++++++. .+ .....+.. .....++++ +.+++.+.. ..+.|.++++.++
T Consensus 113 -~~~~~-------------~~~i~i~d~~--~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~--~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 113 -IVVSY-------------GDVISVFKFG--NPWKRITDDIR---FGGVCEFSN--GLLVYSNEF--NLGQIHITKLQSS 169 (355)
T ss_dssp -EEEEE-------------TTEEEEEESS--TTCCBSSCCEE---EEEEEEEET--TEEEEEESS--CTTCEEEEECCC-
T ss_pred -EEEEE-------------cCEEEEEECC--CCceeeEEecc---CCceEEEEc--cEEEEeCCC--cCcEEEEEECCCC
Confidence 33332 2368888883 11 12222322 333455677 667775212 2235777777763
Q ss_pred Ccc---------------ceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCe-eE
Q 004456 335 DVA---------------PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPF-LD 398 (752)
Q Consensus 335 ~~~---------------~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-l~ 398 (752)
... ...+..+. . ..-.++|||||++|+..+.++ . |.
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~-~------~v~~~~~s~~g~~l~s~s~d~---------------------~~v~ 221 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHT-N------PIKMVRLNRKSDMVATCSQDG---------------------TIIR 221 (355)
T ss_dssp -----------------CCEEECCCS-S------CEEEEEECTTSSEEEEEETTC---------------------SEEE
T ss_pred CccccccccccccccCcccEEEEccC-C------ceEEEEECCCCCEEEEEeCCC---------------------CEEE
Confidence 100 11111111 1 112367999999998877331 4 88
Q ss_pred EEecCCCceeEEee-c-cchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 399 LFDINTGSKERIWE-S-NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 399 ~~d~~~g~~~~l~~-~-~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
+||+.+++...... . ... .+. .++|||||+.|+....+ ..|.+||+..+.
T Consensus 222 iwd~~~~~~~~~~~~g~h~~----~v~-------~~~~s~~~~~l~s~s~d----~~v~iw~~~~~~ 273 (355)
T 3vu4_A 222 VFKTEDGVLVREFRRGLDRA----DVV-------DMKWSTDGSKLAVVSDK----WTLHVFEIFNDQ 273 (355)
T ss_dssp EEETTTCCEEEEEECTTCCS----CEE-------EEEECTTSCEEEEEETT----CEEEEEESSCCS
T ss_pred EEECCCCcEEEEEEcCCCCC----cEE-------EEEECCCCCEEEEEECC----CEEEEEEccCCC
Confidence 99999887654443 2 111 122 35899999988765432 468899987654
No 406
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.88 E-value=2.1e-09 Score=117.55 Aligned_cols=132 Identities=17% Similarity=0.145 Sum_probs=89.0
Q ss_pred cCCCcEEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCC-C
Q 004456 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-I 566 (752)
Q Consensus 489 ~~~g~~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~-~ 566 (752)
+.|. +...+|.|.... ..++|+||++|||++..++.... . .....|++ .|++|+.++|+- .
T Consensus 93 ~edc--l~l~v~~P~~~~---~~~~Pviv~iHGGg~~~g~~~~~------~------~~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDC--LYLNVWTPYPRP---ASPTPVLIWIYGGGFYSGAASLD------V------YDGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCC--CEEEEEEESSCC---SSCEEEEEEECCSTTTCCCTTSG------G------GCTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcC--CeEEEeecCCCC---CCCCeEEEEECCCccccCCCCCC------c------CChHHHHhcCCEEEEEecccccc
Confidence 3454 455666786521 23589999999998765432210 1 12345564 799999988863 2
Q ss_pred CCCCCC-CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004456 567 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 637 (752)
Q Consensus 567 ~g~g~~-~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~ 637 (752)
.|++.. ..........+.|..++++|+++.. ..|++||.|+|+|+||++++.++... +..|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 343322 1111123345789999999999862 36899999999999999998887653 46899999999854
No 407
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.85 E-value=1.8e-07 Score=96.46 Aligned_cols=280 Identities=6% Similarity=-0.088 Sum_probs=144.3
Q ss_pred eEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCC-CCCCCCCccCCCCCceecccccccccccchhhc
Q 004456 63 RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS-RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (752)
Q Consensus 63 ~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (752)
.|+++|.++++...-..... .. .+..||||+.|++..... +...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-----~P-~i~~spDg~~lyVan~~~~r~~~----------------------------- 91 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-----LS-LAVAGHSGSDFALASTSFARSAK----------------------------- 91 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-----TC-EEEECTTSSCEEEEEEEETTTTS-----------------------------
T ss_pred eEEEEECCCCeEEEEEeCCC-----CC-ceEECCCCCEEEEEccccccccc-----------------------------
Confidence 89999999887544332222 12 679999999998874210 0000
Q ss_pred cCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc--------cceeccccCCCCceEEEEecccCccccccccCccccE
Q 004456 142 LKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP--------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKV 211 (752)
Q Consensus 142 ~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~--------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l 211 (752)
..+...|.++|+ +++ ...+.-+ .....+.+|||||+|++...... ..+
T Consensus 92 -----------G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~-----------~~v 149 (368)
T 1mda_H 92 -----------GKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS-----------AAA 149 (368)
T ss_dssp -----------SSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS-----------CEE
T ss_pred -----------CCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC-----------CeE
Confidence 002267999999 663 3333211 24668999999999998754311 246
Q ss_pred EE--EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCC--CC
Q 004456 212 QV--WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEP--AE 287 (752)
Q Consensus 212 ~~--~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 287 (752)
.+ +|+.+ ...+.... .+...|+|+. .++... ..+.+..++.+. ..
T Consensus 150 ~V~~iD~~t--v~~i~v~~-----------------~~~~~p~g~~-~~~~~~-----------~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 150 GLSVPGASD--DQLTKSAS-----------------CFHIHPGAAA-THYLGS-----------CPASLAASDLAAAPAA 198 (368)
T ss_dssp EEEETTTEE--EEEEECSS-----------------CCCCEEEETT-EEECCC-----------CTTSCEEEECCSSCCC
T ss_pred EEEEEchhh--ceEEECCC-----------------ceEEccCCCe-EEEEEc-----------CCCCEEEEECcccccc
Confidence 66 66655 33332111 0133456655 333211 111233334410 00
Q ss_pred CCCCe----EEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccccc-----ccCCC-CCCc
Q 004456 288 GEKPE----ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-----VYSDP-GSPM 357 (752)
Q Consensus 288 ~~~~~----~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-----~~~~~-~~p~ 357 (752)
.+... ........ |..+++++.++|.+. +.++.+|+.+. ....+....... ....+ +...
T Consensus 199 ~~~v~~~~t~~i~vg~~---P~~~~~~~~~~~vs~-----~~V~viD~~~~--~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 199 AGIVGAQCTGAQNCSSQ---AAQANYPGMLVWAVA-----SSILQGDIPAA--GATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp CEECCCCSCTTSCBCSC---CEEETTTTEEEECBS-----SCCEEEECCSS--CCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred CCeEEEEeeeeeeCCCC---ccccccCCEEEEEcC-----CEEEEEECCCC--cceEEEEEEeccccccccccccCccee
Confidence 00000 00000111 112788888888774 46899998763 111111110000 00000 1111
Q ss_pred eeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccC
Q 004456 358 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLN 437 (752)
Q Consensus 358 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d 437 (752)
+.++|||+++++...+. .+... .....+.++|+++++..+-..... ...+ +.+++|
T Consensus 269 v~~s~dg~~lyV~~~~~-----------~~~~~-~~~~~~~ViD~~t~~vv~~i~vg~-----~p~g-------i~~s~D 324 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEH-----------SRSCL-AAAENTSSVTASVGQTSGPISNGH-----DSDA-------IIAAQD 324 (368)
T ss_dssp EEEETTTTEEEEEEEEC-----------SSCTT-SCEEEEEEEESSSCCEEECCEEEE-----EECE-------EEECCS
T ss_pred eEEcCCCCEEEEEeccc-----------cCccc-ccCCCEEEEECCCCeEEEEEECCC-----Ccce-------EEECCC
Confidence 45899999988765310 00000 001135699999887644322211 1223 489999
Q ss_pred CCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 438 QLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 438 ~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
|++++++... ....|.++|+.+++...
T Consensus 325 g~~l~va~~~--~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 325 GASDNYANSA--GTEVLDIYDAASDQDQS 351 (368)
T ss_dssp SSCEEEEEET--TTTEEEEEESSSCEEEE
T ss_pred CCEEEEEccC--CCCeEEEEECCCCcEEE
Confidence 9988887651 13469999998877553
No 408
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.84 E-value=4.1e-09 Score=114.89 Aligned_cols=129 Identities=18% Similarity=0.171 Sum_probs=88.5
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCC-CCCCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPI-IGEGD 571 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~-~g~g~ 571 (752)
-+...+|.|.... .++|+||++|||++..++.... ......|++ .|++|+.++|+-. .|+..
T Consensus 92 cl~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~------------~~~~~~la~~~~~vvv~~nYRlg~~Gf~~ 155 (529)
T 1p0i_A 92 CLYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSSLH------------VYDGKFLARVERVIVVSMNYRVGALGFLA 155 (529)
T ss_dssp CCEEEEEEESSCC----SSEEEEEEECCSTTTSCCTTCG------------GGCTHHHHHHHCCEEEEECCCCHHHHHCC
T ss_pred CCeEEEeeCCCCC----CCCeEEEEECCCccccCCCCcc------------ccChHHHhccCCeEEEEeccccccccccc
Confidence 3555677886531 3589999999998765432210 011345565 7999999888632 23322
Q ss_pred C-CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004456 572 K-LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 638 (752)
Q Consensus 572 ~-~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~~ 638 (752)
. ..........+.|...+++|+++.. ..|+++|.|+|+|.||++++.++... ...|+++|+.+|...
T Consensus 156 ~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 156 LPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp CTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 1 1111123445789999999998852 46899999999999999999888763 458999999998653
No 409
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.83 E-value=1e-06 Score=94.62 Aligned_cols=268 Identities=13% Similarity=0.060 Sum_probs=155.3
Q ss_pred EecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCc
Q 004456 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (752)
Q Consensus 37 ~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~ 116 (752)
.+++||++|+..+ ..+.|.++++.+++.......... .+..+.|+ ++.|+..+.
T Consensus 124 ~~~~~g~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~--~~~l~s~~~---------- 177 (445)
T 2ovr_B 124 CLQFCGNRIVSGS----------DDNTLKVWSAVTGKCLRTLVGHTG----GVWSSQMR--DNIIISGST---------- 177 (445)
T ss_dssp EEEEETTEEEEEE----------TTSCEEEEETTTCCEEEECCCCSS----CEEEEEEE--TTEEEEEET----------
T ss_pred EEEEcCCEEEEEE----------CCCcEEEEECCCCcEEEEEcCCCC----CEEEEEec--CCEEEEEeC----------
Confidence 6888999998863 347899999988875443322211 35667776 556665432
Q ss_pred cCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCceEEEEe
Q 004456 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITS 193 (752)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~~ 193 (752)
.+.|.++++ +|+ ...+..+ ..+..+.| +++.|+..+
T Consensus 178 ---------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s 216 (445)
T 2ovr_B 178 ---------------------------------------DRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGS 216 (445)
T ss_dssp ---------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred ---------------------------------------CCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEe
Confidence 157888898 663 3444444 66777777 466777765
Q ss_pred cccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCcccc
Q 004456 194 MHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEV 272 (752)
Q Consensus 194 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~ 272 (752)
.+ +.+.+||+.+++... +.... ..+..+.| ||+. ++...
T Consensus 217 ~d-------------g~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~-l~~~~----------- 256 (445)
T 2ovr_B 217 RD-------------ATLRVWDIETGQCLHVLMGHV-------------AAVRCVQY--DGRR-VVSGA----------- 256 (445)
T ss_dssp TT-------------SEEEEEESSSCCEEEEEECCS-------------SCEEEEEE--CSSC-EEEEE-----------
T ss_pred CC-------------CEEEEEECCCCcEEEEEcCCc-------------ccEEEEEE--CCCE-EEEEc-----------
Confidence 55 379999998765433 22221 11445555 7776 55553
Q ss_pred CccceEEeccCCCCCCCC-CeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccC
Q 004456 273 SPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 351 (752)
Q Consensus 273 ~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 351 (752)
..+.+.++|+ ..+. ...+......+..+.| |++.++.+. ....|.++++.++ +........
T Consensus 257 -~dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~----~d~~i~i~d~~~~--~~~~~~~~~------ 318 (445)
T 2ovr_B 257 -YDFMVKVWDP---ETETCLHTLQGHTNRVYSLQF--DGIHVVSGS----LDTSIRVWDVETG--NCIHTLTGH------ 318 (445)
T ss_dssp -TTSCEEEEEG---GGTEEEEEECCCSSCEEEEEE--CSSEEEEEE----TTSCEEEEETTTC--CEEEEECCC------
T ss_pred -CCCEEEEEEC---CCCcEeEEecCCCCceEEEEE--CCCEEEEEe----CCCeEEEEECCCC--CEEEEEcCC------
Confidence 3446888887 3222 2334444456677777 888888776 3345888888774 222211111
Q ss_pred CCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcc
Q 004456 352 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 431 (752)
Q Consensus 352 ~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 431 (752)
..+..++++++++|+....+ | .|.+||+.+++.......... ....+.
T Consensus 319 --~~~v~~~~~~~~~l~~~~~d-------------g--------~i~vwd~~~~~~~~~~~~~~~-~~~~v~-------- 366 (445)
T 2ovr_B 319 --QSLTSGMELKDNILVSGNAD-------------S--------TVKIWDIKTGQCLQTLQGPNK-HQSAVT-------- 366 (445)
T ss_dssp --CSCEEEEEEETTEEEEEETT-------------S--------CEEEEETTTCCEEEEECSTTS-CSSCEE--------
T ss_pred --cccEEEEEEeCCEEEEEeCC-------------C--------eEEEEECCCCcEEEEEccCCC-CCCCEE--------
Confidence 11223456677777666522 1 489999988876544332110 000111
Q ss_pred eecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 432 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 432 ~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
+++.+++.++... . ...|.++|+.+++..+
T Consensus 367 -~~~~~~~~l~s~~-~---dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 367 -CLQFNKNFVITSS-D---DGTVKLWDLKTGEFIR 396 (445)
T ss_dssp -EEEECSSEEEEEE-T---TSEEEEEETTTCCEEE
T ss_pred -EEEECCCEEEEEe-C---CCeEEEEECCCCceee
Confidence 2333566554443 2 3469999998876543
No 410
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.83 E-value=1.3e-07 Score=99.93 Aligned_cols=221 Identities=10% Similarity=-0.029 Sum_probs=116.6
Q ss_pred cceeEEeecCCCCCCCCcee---ecCCCC-CceeceeEecC--------CCCeEEEeeccccccccccCcceEEEEEccc
Q 004456 4 FTGIGIHRLLPDDSLGPEKE---VHGYPD-GAKINFVSWSP--------DGKRIAFSVRVDEEDNVSSCKLRVWIADAET 71 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~---i~~~~~-~~~~~~~~~SP--------DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~ 71 (752)
...|.++++.. +.... +..+.. ...+....||| ||+.||-.+ .+..|.|+|+.+
T Consensus 110 d~~v~lw~~~~----~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s----------~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 110 DNTVRLIITKN----ETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG----------DDCTLIIWRLTD 175 (393)
T ss_dssp TSCEEEEEEET----TEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE----------TTSEEEEEEEET
T ss_pred CCcEEEEECCC----CccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE----------CCCeEEEEECCC
Confidence 34577777765 54322 221221 23689999998 999999874 346788888766
Q ss_pred Ccc-eeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhh
Q 004456 72 GEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESL 150 (752)
Q Consensus 72 g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 150 (752)
+.. ..+..+.. .+..+.|+|++..++.+... .
T Consensus 176 ~~~~~~~~~~~~-----~v~~v~~~p~~~~~l~~~~~--d---------------------------------------- 208 (393)
T 4gq1_A 176 EGPILAGYPLSS-----PGISVQFRPSNPNQLIVGER--N---------------------------------------- 208 (393)
T ss_dssp TEEEEEEEECSS-----CEEEEEEETTEEEEEEEEET--T----------------------------------------
T ss_pred CceeeeecCCCC-----CcEEEEECCCCCceEEecCC--C----------------------------------------
Confidence 543 33332222 35688999998754444221 0
Q ss_pred hhhhcccEEEEEcc-CCCc--------------------------cccCCc-cceeccccC-CCCceEEEEecccCcccc
Q 004456 151 FDYYTTAQLVLGSL-DGTA--------------------------KDFGTP-AVYTAVEPS-PDQKYVLITSMHRPYSYK 201 (752)
Q Consensus 151 ~~~~~~~~i~~~~~-~G~~--------------------------~~l~~~-~~~~~~~~S-pDGk~l~~~~~~~~~~~~ 201 (752)
+.|.++|+ .++. .....+ ..+..+.|+ |||+.|+-.+.+.
T Consensus 209 ------~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~----- 277 (393)
T 4gq1_A 209 ------GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG----- 277 (393)
T ss_dssp ------SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS-----
T ss_pred ------CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC-----
Confidence 23333333 2210 000111 344456665 8999998776553
Q ss_pred ccccCccccEEEEecCCcee-EEecCCCCCCC----CCc-ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCcc
Q 004456 202 VPCARFSQKVQVWTTDGKLV-RELCDLPPAED----IPV-CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPR 275 (752)
Q Consensus 202 ~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~----~~~-~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~ 275 (752)
.+.+||+..+.. ..+........ .|. .............|+|.... ++.++. ...
T Consensus 278 --------~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sg----------s~D 338 (393)
T 4gq1_A 278 --------AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMD-YFATAH----------SQH 338 (393)
T ss_dssp --------EEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTT-EEEEEE----------TTT
T ss_pred --------CEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCC-EEEEEE----------CCC
Confidence 788898875532 22221111100 010 00000111223445554443 333321 134
Q ss_pred ceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEee
Q 004456 276 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (752)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 317 (752)
+.|++||+. .+.....+......+..++|||||+.|+.++
T Consensus 339 g~V~lwd~~--~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 339 GLIQLINTY--EKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp TEEEEEETT--CTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEECC--CCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 578999984 3344555666777899999999999999986
No 411
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.83 E-value=4.5e-09 Score=114.60 Aligned_cols=128 Identities=16% Similarity=0.131 Sum_probs=87.9
Q ss_pred EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHH-hCCcEEEecCCCCC-CCCCCC
Q 004456 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPI-IGEGDK 572 (752)
Q Consensus 495 ~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~-~g~g~~ 572 (752)
+..-+|.|... ..++|+||++|||++..++.... ......|+ +.|++|+.++|+-. .|+...
T Consensus 95 l~lnv~~P~~~----~~~~Pv~v~iHGG~~~~g~~~~~------------~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~ 158 (537)
T 1ea5_A 95 LYLNIWVPSPR----PKSTTVMVWIYGGGFYSGSSTLD------------VYNGKYLAYTEEVVLVSLSYRVGAFGFLAL 158 (537)
T ss_dssp CEEEEEECSSC----CSSEEEEEEECCSTTTCCCTTCG------------GGCTHHHHHHHTCEEEECCCCCHHHHHCCC
T ss_pred CeEEEeccCCC----CCCCeEEEEECCCcccCCCCCCC------------ccChHHHHhcCCEEEEEeccCccccccccC
Confidence 55566778653 13589999999998765432210 01134556 78999999888632 233221
Q ss_pred -CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCC
Q 004456 573 -LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 638 (752)
Q Consensus 573 -~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~--~p~~~~~~v~~~~~~~ 638 (752)
..........+.|...+++|+++.. ..|+++|.|+|+|.||++++.++.. ....|+++|+.+|...
T Consensus 159 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 159 HGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp TTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 0111122345789999999999863 3689999999999999999988765 2358999999998653
No 412
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.82 E-value=2.4e-09 Score=117.19 Aligned_cols=131 Identities=18% Similarity=0.121 Sum_probs=87.3
Q ss_pred EEEEEEEeC-----CCCCCCCC--CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCC
Q 004456 494 PLTATLYLP-----PGYDQSKD--GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (752)
Q Consensus 494 ~~~~~l~~P-----~~~~~~~~--~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (752)
-+...+|.| ... ..++ .++|+||++|||++..++.... . .....|+++|++|+.++++..
T Consensus 90 cL~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~------~------~~~~~l~~~g~vvv~~nYRl~ 156 (551)
T 2fj0_A 90 CIHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSD------L------HGPEYLVSKDVIVITFNYRLN 156 (551)
T ss_dssp CCEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTT------T------CBCTTGGGGSCEEEEECCCCH
T ss_pred CeEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCccc------c------cCHHHHHhCCeEEEEeCCcCC
Confidence 466677788 321 1111 1289999999998765433211 0 112345779999999888632
Q ss_pred -CCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCC
Q 004456 567 -IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 637 (752)
Q Consensus 567 -~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~--~p~~~~~~v~~~~~~ 637 (752)
.|+.............+.|+.++++|+++.. ..|+++|.|+|+|+||++++.++.. .+..|+++|+++|..
T Consensus 157 ~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 157 VYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred ccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 2322211111122345789999999998863 3689999999999999999988865 356899999999863
No 413
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.80 E-value=2.5e-08 Score=97.50 Aligned_cols=188 Identities=14% Similarity=-0.010 Sum_probs=103.0
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.||++||.+... ..| ..++..| ..+|.|+.++ ..|++ ...+++.+.++.
T Consensus 22 ~~~l~~~hg~~~~~-----------~~~----~~~~~~l-~~~~~v~~~d---~~g~~----------~~~~~~~~~i~~ 72 (244)
T 2cb9_A 22 GKNLFCFPPISGFG-----------IYF----KDLALQL-NHKAAVYGFH---FIEED----------SRIEQYVSRITE 72 (244)
T ss_dssp SSEEEEECCTTCCG-----------GGG----HHHHHHT-TTTSEEEEEC---CCCST----------THHHHHHHHHHH
T ss_pred CCCEEEECCCCCCH-----------HHH----HHHHHHh-CCCceEEEEc---CCCHH----------HHHHHHHHHHHH
Confidence 57899999964210 111 1233333 4689999954 34432 123444444443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCCc-cCccccc---cchh--hh----HHH
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLTP-FGFQTEF---RTLW--EA----TNV 659 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---p~~~~~~v~~~~~~~~~~~~-~~~~~~~---~~~~--~~----~~~ 659 (752)
+ . ...++.++||||||.+|+.++.+. ++.++++|++++........ ....... ..+. .. ...
T Consensus 73 ~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (244)
T 2cb9_A 73 I---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRC 147 (244)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHH
T ss_pred h---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 1 125799999999999999998764 56788888887653211000 0000000 0000 00 001
Q ss_pred HHhcCh-hhhcCCCCCCEEEEEeC--CCCCCCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCcc-CCccccHHHHHHHHH
Q 004456 660 YIEMSP-ITHANKIKKPILIIHGE--VDDKVGLFPMQAERFFDALKGH-GALSRLVLLPFEHHV-YAARENVMHVIWETD 734 (752)
Q Consensus 660 ~~~~~~-~~~~~~~~~P~li~~G~--~D~~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~~ 734 (752)
+..+.. ......+++|+++++|+ .|.. + .... ..+... ...++++.+++ +|. +...+....+.+.+.
T Consensus 148 ~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~--~~~~----~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~ 219 (244)
T 2cb9_A 148 YQEYWAQLINEGRIKSNIHFIEAGIQTETS-G--AMVL----QKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIIL 219 (244)
T ss_dssp HHHHHHHCCCCSCBSSEEEEEECSBCSCCC-H--HHHT----TSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCcCCCEEEEEccCccccc-c--ccch----hHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHH
Confidence 111100 01245678999999999 8873 3 3332 222222 23588999996 883 333456677888889
Q ss_pred HHHHHHhc
Q 004456 735 RWLQKYCL 742 (752)
Q Consensus 735 ~fl~~~l~ 742 (752)
+||.+...
T Consensus 220 ~~L~~~~~ 227 (244)
T 2cb9_A 220 NILDKINS 227 (244)
T ss_dssp HHHHTC--
T ss_pred HHHhcCcc
Confidence 99986543
No 414
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.79 E-value=3.6e-08 Score=99.85 Aligned_cols=105 Identities=13% Similarity=0.032 Sum_probs=74.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccC--CCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFS--GMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~ 590 (752)
.|.||++||.+... ..+. ..+......|.++||.|++ .+.+|+|.+...........+++.+++
T Consensus 8 ~~~vVlvHG~~~~~-----------~~~~~~~~w~~l~~~L~~~G~~V~~---~d~~g~g~s~~~~~~~~~l~~~i~~~l 73 (320)
T 1ys1_X 8 RYPIILVHGLTGTD-----------KYAGVLEYWYGIQEDLQQRGATVYV---ANLSGFQSDDGPNGRGEQLLAYVKTVL 73 (320)
T ss_dssp SSCEEEECCTTCCS-----------EETTTEESSTTHHHHHHHTTCCEEE---CCCCSSCCSSSTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCc-----------cccchHHHHHHHHHHHHhCCCEEEE---EcCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 57899999963211 0000 1223467788999999999 555677666444444455556555555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 591 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
+.+ +.+++.|+||||||.++..++.++|++++++|++++..
T Consensus 74 ~~~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 74 AAT------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HHH------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred HHh------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 444 24689999999999999999999999999999999753
No 415
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.78 E-value=1.4e-08 Score=104.24 Aligned_cols=194 Identities=14% Similarity=0.052 Sum_probs=104.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.|+++||.+.. ...|. .++..| ..+|.|+. .+.+|+|.+............++.+.+..
T Consensus 101 ~~~l~~lhg~~~~-----------~~~~~----~l~~~L-~~~~~v~~---~d~~g~~~~~~~~~~~~~~a~~~~~~i~~ 161 (329)
T 3tej_A 101 GPTLFCFHPASGF-----------AWQFS----VLSRYL-DPQWSIIG---IQSPRPNGPMQTAANLDEVCEAHLATLLE 161 (329)
T ss_dssp SCEEEEECCTTSC-----------CGGGG----GGGGTS-CTTCEEEE---ECCCTTTSHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCccc-----------chHHH----HHHHhc-CCCCeEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5789999996421 11222 222223 56899999 44556654322222334444444444433
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CCCceeEEEEccCCCCCC----CC-ccCccccc--------------
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCCGIARSGSYNKT----LT-PFGFQTEF-------------- 650 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~p~~~~~~v~~~~~~~~~----~~-~~~~~~~~-------------- 650 (752)
+ . ...++.|+||||||.+++.++.+ +|++++++|++.+..... .. ........
T Consensus 162 ~---~--~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (329)
T 3tej_A 162 Q---Q--PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA 236 (329)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHT
T ss_pred h---C--CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHh
Confidence 2 1 12589999999999999999998 999999999888653210 00 00000000
Q ss_pred ------cchhh-hHHHHHhc-Chh--hhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 004456 651 ------RTLWE-ATNVYIEM-SPI--THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 720 (752)
Q Consensus 651 ------~~~~~-~~~~~~~~-~~~--~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 720 (752)
..... ....+... ..+ .....+.+|++++.|+.|..++ .... ..++..-..++++.++ ++|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~--~~~~----~~w~~~~~~~~~~~v~-g~H~~ 309 (329)
T 3tej_A 237 QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEG--MSPE----RAWSPWIAELDIYRQD-CAHVD 309 (329)
T ss_dssp TCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTT--CCHH----HHHTTTEEEEEEEEES-SCGGG
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCC--CCch----hhHHHhcCCcEEEEec-CChHH
Confidence 00000 00001000 000 0123457899999999998776 3332 2233333467888997 57863
Q ss_pred C-ccccHHHHHHHHHHHH
Q 004456 721 A-ARENVMHVIWETDRWL 737 (752)
Q Consensus 721 ~-~~~~~~~~~~~~~~fl 737 (752)
. ..+......+.+.+||
T Consensus 310 ~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 310 IISPGTFEKIGPIIRATL 327 (329)
T ss_dssp GGSTTTHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHh
Confidence 3 2333345555565655
No 416
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.78 E-value=5.6e-07 Score=96.45 Aligned_cols=214 Identities=10% Similarity=0.061 Sum_probs=124.1
Q ss_pred eEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 004456 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (752)
Q Consensus 36 ~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~ 115 (752)
..+++||++|+..+ ..+.|.++++.+++.......... .+..+.| |++.|+..+.
T Consensus 137 ~~~~~d~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~h~~----~v~~l~~--~~~~l~sg~~--------- 191 (435)
T 1p22_A 137 YCLQYDDQKIVSGL----------RDNTIKIWDKNTLECKRILTGHTG----SVLCLQY--DERVIITGSS--------- 191 (435)
T ss_dssp EEEECCSSEEEEEE----------SSSCEEEEESSSCCEEEEECCCSS----CEEEEEC--CSSEEEEEET---------
T ss_pred EEEEECCCEEEEEe----------CCCeEEEEeCCCCeEEEEEcCCCC----cEEEEEE--CCCEEEEEcC---------
Confidence 46777999998863 346899999988876554332221 3455566 8887776532
Q ss_pred ccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCc-cceeccccCCCCceEEEE
Q 004456 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLIT 192 (752)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~ 192 (752)
.+.|.++++ +|+ ...+..+ ..+..+.|++ +.|+..
T Consensus 192 ----------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~ 229 (435)
T 1p22_A 192 ----------------------------------------DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTC 229 (435)
T ss_dssp ----------------------------------------TSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEE
T ss_pred ----------------------------------------CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEe
Confidence 157888998 664 3444444 7788888874 466665
Q ss_pred ecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCcccc
Q 004456 193 SMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEV 272 (752)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~ 272 (752)
+.+ +.+.+||+.++......... ......+..+.| +|+. |+..+
T Consensus 230 s~d-------------g~i~vwd~~~~~~~~~~~~~---------~~~~~~v~~~~~--~~~~-l~s~~----------- 273 (435)
T 1p22_A 230 SKD-------------RSIAVWDMASPTDITLRRVL---------VGHRAAVNVVDF--DDKY-IVSAS----------- 273 (435)
T ss_dssp ETT-------------SCEEEEECSSSSCCEEEEEE---------CCCSSCEEEEEE--ETTE-EEEEE-----------
T ss_pred eCC-------------CcEEEEeCCCCCCceeeeEe---------cCCCCcEEEEEe--CCCE-EEEEe-----------
Confidence 544 37999999866432110000 001112445555 7775 55543
Q ss_pred CccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCC
Q 004456 273 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 352 (752)
Q Consensus 273 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 352 (752)
..+.+.++|+. .+.....+......+..+.| +++.|+.+. ..+.|.++|+.++ .........
T Consensus 274 -~dg~i~vwd~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~----~dg~i~iwd~~~~--~~~~~~~~h------- 335 (435)
T 1p22_A 274 -GDRTIKVWNTS--TCEFVRTLNGHKRGIACLQY--RDRLVVSGS----SDNTIRLWDIECG--ACLRVLEGH------- 335 (435)
T ss_dssp -TTSEEEEEETT--TCCEEEEEECCSSCEEEEEE--ETTEEEEEE----TTSCEEEEETTTC--CEEEEECCC-------
T ss_pred -CCCeEEEEECC--cCcEEEEEcCCCCcEEEEEe--CCCEEEEEe----CCCeEEEEECCCC--CEEEEEeCC-------
Confidence 34478899983 22233334445556666666 567777765 3345888888774 222222111
Q ss_pred CCCCceeeCCCCCeEEEee
Q 004456 353 PGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 353 ~~~p~~~~s~dg~~l~~~~ 371 (752)
..+..+.+.|+++|+..+
T Consensus 336 -~~~v~~~~~~~~~l~sg~ 353 (435)
T 1p22_A 336 -EELVRCIRFDNKRIVSGA 353 (435)
T ss_dssp -SSCEEEEECCSSEEEEEE
T ss_pred -cCcEEEEEecCCEEEEEe
Confidence 111122344888887776
No 417
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.77 E-value=1.6e-07 Score=96.76 Aligned_cols=92 Identities=12% Similarity=-0.099 Sum_probs=51.5
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCC-Ccc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~-~~~ 84 (752)
.|.+++... ++... .++.+..- .+.+||||++++.+..........+....|.++|+.+++...-...+ ..+
T Consensus 47 ~vsvID~~t----~~v~~--~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC----GVTLG--HSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT----TEEEE--EEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC----CeEEE--EEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 445555544 43322 23334334 79999999998775421000001123578999999998753322111 000
Q ss_pred --ccccccceEEecCCcEEEEE
Q 004456 85 --LNAVFGSFVWVNNSTLLIFT 104 (752)
Q Consensus 85 --~~~~~~~~~wspdg~~l~~~ 104 (752)
.......+.+||||++|+..
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEE
Confidence 00023578999999999886
No 418
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.76 E-value=3.1e-06 Score=88.56 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=140.2
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (752)
..|+.++++| ....+... .....++|+++++.|+++.... ..|++++++++..+.+.....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~~~~~----- 158 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVVSTGL----- 158 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCCEEEEECSSC-----
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCC------------CcEEEEecCCCCcEEEEeCCC-----
Confidence 5789999966 55555444 6788999999999999885443 479999999886655432211
Q ss_pred cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc-cceeeeeeecCCceE
Q 004456 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLAL 313 (752)
Q Consensus 235 ~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~spDg~~l 313 (752)
..+..+++++.+.. |||+.. ....|.+++. ++...+.+.... .....+++.|++..|
T Consensus 159 -------~~p~glavd~~~g~-lY~~d~-----------~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 159 -------ESPGGLAVDWVHDK-LYWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp -------SCCCCEEEETTTTE-EEEEET-----------TTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred -------CCccEEEEEeCCCe-EEEEcC-----------CCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCCeE
Confidence 12457899988877 888852 2347888888 565555555433 456778899988888
Q ss_pred EEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCC
Q 004456 314 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 393 (752)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 393 (752)
+++.+.. ...|+++++++. ..+.+....... ..-++++|++..|+++. ..
T Consensus 217 y~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~------PnGlavd~~~~~lY~aD--------------------~~ 266 (386)
T 3v65_B 217 YWTDWGN--TPRIEASSMDGS--GRRIIADTHLFW------PNGLTIDYAGRRMYWVD--------------------AK 266 (386)
T ss_dssp EEEECSS--SCEEEEEETTSC--SCEEEECSSCSC------EEEEEEEGGGTEEEEEE--------------------TT
T ss_pred EEeccCC--CCEEEEEeCCCC--CcEEEEECCCCC------eeeEEEeCCCCEEEEEE--------------------CC
Confidence 8875322 357999999874 333333222211 11267898888898886 22
Q ss_pred CCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 394 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 394 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
...|+++|+++...+.+...... ....+ ++ +++.|+++... ...|++++..+|+
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~----~P~gi-------av--~~~~ly~td~~---~~~V~~~~~~~G~ 320 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGLP----HPFAI-------TV--FEDSLYWTDWH---TKSINSANKFTGK 320 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSCS----SEEEE-------EE--ETTEEEEEETT---TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCeeEEEEECCCC----CceEE-------EE--ECCEEEEeeCC---CCeEEEEECCCCc
Confidence 34699999876544444332211 11111 23 45667666532 3467778754444
No 419
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.76 E-value=2.6e-06 Score=87.28 Aligned_cols=212 Identities=10% Similarity=-0.024 Sum_probs=122.6
Q ss_pred CcceEEEEEcccCcc-eeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 60 CKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 60 ~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
....|.++|.++++. +.+.... ....++++||| .|+++...
T Consensus 62 ~~~~v~viD~~t~~~~~~i~~~~------~p~~i~~~~~g-~lyv~~~~------------------------------- 103 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRITGFT------SPRYIHFLSDE-KAYVTQIW------------------------------- 103 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEECCS------SEEEEEEEETT-EEEEEEBS-------------------------------
T ss_pred CCCEEEEEECcccEEEEEcCCCC------CCcEEEEeCCC-eEEEEECC-------------------------------
Confidence 347899999998886 4453221 24677899998 56655210
Q ss_pred hhccCChhhhhhhhhhcccEEEEEcc-CCCcc-ccCCcc------ceeccccCCCCceEEEEecccCccccccccCcccc
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK 210 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~-~l~~~~------~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~ 210 (752)
...|+++|+ +++.. .+.... ....+++ ++++|++..... ...
T Consensus 104 -----------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~-----------~~~ 153 (328)
T 3dsm_A 104 -----------------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSY-----------QNR 153 (328)
T ss_dssp -----------------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTT-----------CCE
T ss_pred -----------------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCC-----------CCE
Confidence 157888888 55433 232222 4456666 677887774321 147
Q ss_pred EEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC
Q 004456 211 VQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK 290 (752)
Q Consensus 211 l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (752)
|.++|+.+.+........ ..+..+.++|||+ +++++..+..... .....+.|+++|. ++.+
T Consensus 154 v~viD~~t~~~~~~i~~g-------------~~p~~i~~~~dG~--l~v~~~~~~~~~~-~~~~~~~v~~id~---~t~~ 214 (328)
T 3dsm_A 154 ILKIDTETDKVVDELTIG-------------IQPTSLVMDKYNK--MWTITDGGYEGSP-YGYEAPSLYRIDA---ETFT 214 (328)
T ss_dssp EEEEETTTTEEEEEEECS-------------SCBCCCEECTTSE--EEEEBCCBCTTCS-SCBCCCEEEEEET---TTTE
T ss_pred EEEEECCCCeEEEEEEcC-------------CCccceEEcCCCC--EEEEECCCccCCc-cccCCceEEEEEC---CCCe
Confidence 999999877654322221 1145789999998 6666532211100 0011358999998 4444
Q ss_pred CeE-Eeec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCC-ceeeCCCCCeE
Q 004456 291 PEI-LHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGTNV 367 (752)
Q Consensus 291 ~~~-l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p-~~~~s~dg~~l 367 (752)
... +... ......++++||++.|++.. . .|+++|++++............ ..| .++++|++..|
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~----~--~v~~~d~~t~~~~~~~~~~~~~-------~~p~gi~vdp~~g~l 281 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWIN----N--DIWRMPVEADRVPVRPFLEFRD-------TKYYGLTVNPNNGEV 281 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEES----S--SEEEEETTCSSCCSSCSBCCCS-------SCEEEEEECTTTCCE
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEc----c--EEEEEECCCCceeeeeeecCCC-------CceEEEEEcCCCCeE
Confidence 332 3211 23567899999999887754 1 6999999875221111111100 111 25688877777
Q ss_pred EEee
Q 004456 368 IAKI 371 (752)
Q Consensus 368 ~~~~ 371 (752)
+++.
T Consensus 282 yva~ 285 (328)
T 3dsm_A 282 YVAD 285 (328)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
No 420
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.73 E-value=5.1e-08 Score=94.38 Aligned_cols=182 Identities=10% Similarity=0.007 Sum_probs=97.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.|+++||.+... .. +..+...|. . |.|+.++ ..|.+. ...++.+.++.
T Consensus 17 ~~~l~~~hg~~~~~-----------~~----~~~~~~~l~-~-~~v~~~d---~~g~~~----------~~~~~~~~i~~ 66 (230)
T 1jmk_C 17 EQIIFAFPPVLGYG-----------LM----YQNLSSRLP-S-YKLCAFD---FIEEED----------RLDRYADLIQK 66 (230)
T ss_dssp SEEEEEECCTTCCG-----------GG----GHHHHHHCT-T-EEEEEEC---CCCSTT----------HHHHHHHHHHH
T ss_pred CCCEEEECCCCCch-----------HH----HHHHHHhcC-C-CeEEEec---CCCHHH----------HHHHHHHHHHH
Confidence 47899999964210 11 112343443 4 9999844 345432 23344455544
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCCccC---ccc----------cc---cch
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLTPFG---FQT----------EF---RTL 653 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---p~~~~~~v~~~~~~~~~~~~~~---~~~----------~~---~~~ 653 (752)
+. ...++.++||||||.+|+.++.+. ++.++++|++++........+. ... .. ...
T Consensus 67 ~~-----~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
T 1jmk_C 67 LQ-----PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSE 141 (230)
T ss_dssp HC-----CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSH
T ss_pred hC-----CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhH
Confidence 42 125799999999999999998764 3568888887754321100000 000 00 000
Q ss_pred h--hhHH----HHHhcCh-hhhcCCCCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEeCCCCc--cCCcc
Q 004456 654 W--EATN----VYIEMSP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHH--VYAAR 723 (752)
Q Consensus 654 ~--~~~~----~~~~~~~-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H--~~~~~ 723 (752)
. .... .+..+.. ......+++|+++++|++|..++ .. . ..+.. ....++++.+++ +| .+. .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~-~----~~w~~~~~~~~~~~~i~g-~H~~~~~-~ 212 (230)
T 1jmk_C 142 AVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--EW-L----ASWEEATTGAYRMKRGFG-THAEMLQ-G 212 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--TT-E----ECSGGGBSSCEEEEECSS-CGGGTTS-H
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc--cc-c----chHHHhcCCCeEEEEecC-ChHHHcC-c
Confidence 0 0000 0001100 01235678999999999999876 21 1 12222 234578999997 89 443 3
Q ss_pred ccHHHHHHHHHHHHH
Q 004456 724 ENVMHVIWETDRWLQ 738 (752)
Q Consensus 724 ~~~~~~~~~~~~fl~ 738 (752)
+....+...+.+||.
T Consensus 213 ~~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 213 ETLDRNAGILLEFLN 227 (230)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHh
Confidence 444555555666653
No 421
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=6.3e-06 Score=84.93 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=138.6
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (752)
..|+.++++| ....+... .....++|+++++.|+++.... ..|+.++++++..+.+.....
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~~~~~----- 115 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVVSTGL----- 115 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEECSSC-----
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccC------------CceEEEecCCCCceEEEeCCC-----
Confidence 5688999977 55554444 6678999999999999885443 478999998876555432211
Q ss_pred cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc-cceeeeeeecCCceE
Q 004456 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLAL 313 (752)
Q Consensus 235 ~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~spDg~~l 313 (752)
..+..+++++.+.. |||+.. ....|.+++. ++...+.+.... .....+++.|++..|
T Consensus 116 -------~~p~glavd~~~g~-ly~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 116 -------ESPGGLAVDWVHDK-LYWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp -------SCCCEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred -------CCccEEEEecCCCe-EEEEcC-----------CCCeEEEEcC---CCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 11457899987777 898852 2347888888 565555555332 446778899988888
Q ss_pred EEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCC
Q 004456 314 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 393 (752)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 393 (752)
+++.+.. ...|+++++++. ..+.+....... ..-+++++++..|+++. ..
T Consensus 174 y~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~------PnGla~d~~~~~lY~aD--------------------~~ 223 (349)
T 3v64_C 174 YWTDWGN--TPRIEASSMDGS--GRRIIADTHLFW------PNGLTIDYAGRRMYWVD--------------------AK 223 (349)
T ss_dssp EEEECSS--SCEEEEEETTSC--SCEESCCSSCSC------EEEEEEETTTTEEEEEE--------------------TT
T ss_pred EEeccCC--CCEEEEEeCCCC--CcEEEEECCCCC------cceEEEeCCCCEEEEEE--------------------CC
Confidence 8875332 357999999874 333333222211 11267899998998886 22
Q ss_pred CCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 394 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 394 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
...|+++|+++...+.+...... ....+ ++ +++.|+++... ...|++++..+|+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~~~----~P~gi-------av--~~~~ly~td~~---~~~V~~~~~~~G~ 277 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVISQGLP----HPFAI-------TV--FEDSLYWTDWH---TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCS----SEEEE-------EE--ETTEEEEEETT---TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCceEEEEeCCCC----CceEE-------EE--ECCEEEEecCC---CCeEEEEEccCCC
Confidence 34699999876544444332211 11111 23 45566665432 3357777744443
No 422
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.72 E-value=1.7e-06 Score=92.22 Aligned_cols=118 Identities=8% Similarity=0.044 Sum_probs=73.8
Q ss_pred cceeccccCCC-CceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 175 AVYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 175 ~~~~~~~~SpD-Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
..+..++|+|+ ++.|+..+.+ +.+.+||+.++........ ....+..++|+|||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~~~------------~~~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCATLP------------STVAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEEEC------------GGGCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeeccC------------CCCceeEEEEcCCC
Confidence 67889999999 6667666555 3799999987743221111 11236789999999
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-------ccceeeeeeecCCceEEEeeeccc---Cc
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-------DLRFRSVSWCDDSLALVNETWYKT---SQ 323 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~spDg~~l~~~~~~~~---~~ 323 (752)
+. |+... ..+.|.+||. .+.....+... ...+..+.|++++..++.....++ ..
T Consensus 205 ~~-lasgs------------~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 205 KQ-LAVGK------------QNGTVVQYLP---TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp SC-EEEEE------------TTSCEEEECT---TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CE-EEEEc------------CCCcEEEEcc---CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 97 66654 3347888887 42222223211 126778999999988766543331 22
Q ss_pred eeEEEEcCCC
Q 004456 324 TRTWLVCPGS 333 (752)
Q Consensus 324 ~~l~~~~~~~ 333 (752)
..+.++++..
T Consensus 269 ~~v~i~~l~~ 278 (434)
T 2oit_A 269 PDVVMALLPK 278 (434)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEEecc
Confidence 3466666654
No 423
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=2.1e-06 Score=89.98 Aligned_cols=180 Identities=11% Similarity=0.076 Sum_probs=123.4
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+.++++++....+..... ....++|.+.++.|+++-.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~-----~~~gl~~d~~~~~ly~~D~---------------------------------- 135 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLE-----NAIALDFHHRRELVFWSDV---------------------------------- 135 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCS-----CEEEEEEETTTTEEEEEET----------------------------------
T ss_pred CccceeeccCCCcEEEEecCCC-----ccEEEEEecCCCeEEEEeC----------------------------------
Confidence 3678999988887766643322 2457899998888988721
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-CccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
....|++++++| ..+.+.. . .....+++.+.+..|+++.... ..|++.+++
T Consensus 136 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~------------~~I~~~~~d 189 (386)
T 3v65_B 136 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLD 189 (386)
T ss_dssp --------------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT------------TEEEECBTT
T ss_pred --------------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC------------CeEEEEeCC
Confidence 115799999977 4444432 2 4566888999999998886543 378888888
Q ss_pred CceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec
Q 004456 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (752)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 297 (752)
++..+.+..... ..+.+++++|++.. |||+... ....|++++. ++...+.+...
T Consensus 190 g~~~~~l~~~~l------------~~P~giavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 243 (386)
T 3v65_B 190 GAHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSM---DGSGRRIIADT 243 (386)
T ss_dssp SCSCEEEECSSC------------SCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEEEECS
T ss_pred CCceEEeecCCC------------CCCcEEEEEcCCCe-EEEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 876555543211 12568999998887 8888521 1257899988 56666665533
Q ss_pred -ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 298 -DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 298 -~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
-.....++|+|+++.|+++. .....|+++++++.
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD---~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVD---AKHHVIERANLDGS 278 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEE---TTTTEEEEECTTSC
T ss_pred CCCCeeeEEEeCCCCEEEEEE---CCCCEEEEEeCCCC
Confidence 23456789999999888864 23457999999873
No 424
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.71 E-value=4.9e-06 Score=82.34 Aligned_cols=195 Identities=10% Similarity=-0.015 Sum_probs=112.8
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
....+.++|||+ |.+++. .....|++++..++..+.+..... . ....+.++|||+ |+++..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~--------~~~~~i~~~~~~~~~~~~~~~~~~---~-~p~~i~~~~~g~-l~v~~~----- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE--------GMYGRVVKLATGSTGTTVLPFNGL---Y-QPQGLAVDGAGT-VYVTDF----- 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC--------SSSCEEEEECC-----EECCCCSC---C-SCCCEEECTTCC-EEEEET-----
T ss_pred CccceEECCCCC-EEEEcc--------CCCCcEEEecCCCcccceEeeCCc---C-CcceeEECCCCC-EEEEcC-----
Confidence 466789999997 433132 234689999877666554432211 1 245789999998 555421
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCc--cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~--~~~~~~~~SpDGk~ 188 (752)
...|++++.+| ....+... .....++++|||+
T Consensus 86 --------------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~- 120 (270)
T 1rwi_B 86 --------------------------------------------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA- 120 (270)
T ss_dssp --------------------------------------------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-
T ss_pred --------------------------------------------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-
Confidence 14788899866 33333222 5677899999997
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
|++..... ..|++++..+.......... ...+..++++|||+ |+++..
T Consensus 121 l~v~~~~~------------~~i~~~~~~~~~~~~~~~~~------------~~~p~~i~~~~~g~--l~v~~~------ 168 (270)
T 1rwi_B 121 VYVADRGN------------NRVVKLAAGSKTQTVLPFTG------------LNDPDGVAVDNSGN--VYVTDT------ 168 (270)
T ss_dssp EEEEEGGG------------TEEEEECTTCCSCEECCCCS------------CCSCCCEEECTTCC--EEEEEG------
T ss_pred EEEEECCC------------CEEEEEECCCceeEeecccc------------CCCceeEEEeCCCC--EEEEEC------
Confidence 55553332 36788865544322221110 01256789999997 666642
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEeecc-cceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
..+.|++++. ++.......... .....++++++| .|+++.. ....|++++.++.
T Consensus 169 -----~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~---~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 169 -----DNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEH---NTNQVVKLLAGST 223 (270)
T ss_dssp -----GGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTC-CEEEEET---TTSCEEEECTTCS
T ss_pred -----CCCEEEEEec---CCCceEeecccCCCCceEEEECCCC-CEEEEEC---CCCcEEEEcCCCC
Confidence 2347888887 444333222222 446678899999 4555432 2335999998763
No 425
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.70 E-value=2e-08 Score=106.65 Aligned_cols=109 Identities=9% Similarity=-0.060 Sum_probs=77.1
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEA 588 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~ 588 (752)
..|+||++||.+.. ....+....+..|++ .||.|++ .+.+|+|.+.... .......+|+.+
T Consensus 69 ~~p~vvliHG~~~~-------------~~~~w~~~l~~~l~~~~~~~Vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~ 132 (452)
T 1bu8_A 69 DRKTRFIVHGFIDK-------------GEDGWLLDMCKKMFQVEKVNCIC---VDWRRGSRTEYTQASYNTRVVGAEIAF 132 (452)
T ss_dssp TSEEEEEECCSCCT-------------TCTTHHHHHHHHHHTTCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCC-------------CCchHHHHHHHHHHhhCCCEEEE---EechhcccCchhHhHhhHHHHHHHHHH
Confidence 36999999996311 001111113455665 4999999 5566776654211 122345678888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+++|.++..++.+++.|+||||||++|+.++.++|++++++|+++|.
T Consensus 133 li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1bu8_A 133 LVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (452)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCC
Confidence 888887654456689999999999999999999999999999999875
No 426
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.70 E-value=1.6e-08 Score=110.42 Aligned_cols=132 Identities=20% Similarity=0.244 Sum_probs=86.4
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHH-HHH-hCCcEEEecCCCCCC-CCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IFL-ARRFAVLAGPSIPII-GEG 570 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~-~~G~~v~~~~~~~~~-g~g 570 (752)
-+...+|.|....+ ..++|+||++|||++..++.. .+.. ..++. .++ ..|++|+.++|+... |+.
T Consensus 105 cl~l~v~~P~~~~~--~~~~Pviv~iHGGg~~~g~~~--------~~~~--~~l~~~~l~~~~~~vvv~~nYRl~~~gf~ 172 (544)
T 1thg_A 105 CLYLNVFRPAGTKP--DAKLPVMVWIYGGAFVYGSSA--------AYPG--NSYVKESINMGQPVVFVSINYRTGPFGFL 172 (544)
T ss_dssp CCEEEEEEETTCCT--TCCEEEEEEECCCTTCCSGGG--------GCCS--HHHHHHHHHTTCCCEEEEECCCCHHHHHC
T ss_pred CeEEEEEeCCCCCC--CCCCcEEEEECCCccccCCcc--------ccCc--hHHHHHHhhcCCCEEEEeCCCCCCcccCC
Confidence 35666788876432 235899999999987654321 1111 11222 223 358999998886432 221
Q ss_pred CCCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEccCCC
Q 004456 571 DKLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGSY 637 (752)
Q Consensus 571 ~~~~--~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--------p~~~~~~v~~~~~~ 637 (752)
.... ........+.|..++++|+++.. ..|++||.|+|+|.||++++.++... ...|+++|+.+|..
T Consensus 173 ~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 173 GGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp CSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred CcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 1000 00112345889999999998862 46899999999999999998887752 45799999999853
No 427
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.70 E-value=2.7e-06 Score=87.43 Aligned_cols=134 Identities=8% Similarity=0.027 Sum_probs=76.7
Q ss_pred cccc-CCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceE
Q 004456 179 AVEP-SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTL 257 (752)
Q Consensus 179 ~~~~-SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l 257 (752)
.+.| .+||+.+ |.+.. +++++.|..+...+.+..................+...++++||+++ +
T Consensus 230 ~~~~~~~dG~~~-~vs~~-------------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~-l 294 (386)
T 3sjl_D 230 HPAYSQKAGRLV-WPTYT-------------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR-I 294 (386)
T ss_dssp CCEEETTTTEEE-EEBTT-------------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE-E
T ss_pred cceeEcCCCcEE-EEeCC-------------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe-E
Confidence 3466 4788655 44443 37899999877554432221000000000000123445788999997 7
Q ss_pred EEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
|.+........ .....+.++++|+ ++.+...-.........+++|||++.++|.++.. .+.|.++|..++
T Consensus 295 yV~~~~~~~~~--hk~~~~~V~viD~---~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~--~~~VsViD~~t~ 364 (386)
T 3sjl_D 295 YLLVDQRDEWR--HKTASRFVVVLDA---KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG--DKTLYIHDAESG 364 (386)
T ss_dssp EEEEEECCTTC--TTSCEEEEEEEET---TTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT--TTEEEEEETTTC
T ss_pred EEEeccccccc--cCCCCCEEEEEEC---CCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC--CCeEEEEECCCC
Confidence 77643221110 1123458999999 5555444333445667899999998777776543 346999999885
No 428
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=3.8e-06 Score=86.87 Aligned_cols=194 Identities=9% Similarity=0.011 Sum_probs=96.1
Q ss_pred cEEEEEcc-CCCcc-ccCCc----cceeccccCCCCceEEEEecccCccccc------cccCccccEEEEecCCceeEEe
Q 004456 157 AQLVLGSL-DGTAK-DFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKV------PCARFSQKVQVWTTDGKLVREL 224 (752)
Q Consensus 157 ~~i~~~~~-~G~~~-~l~~~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~------~~~~~~~~l~~~d~~~~~~~~l 224 (752)
+.|.++|. +++.. ++... .....+.|+||++.++.+....+..... ....+...|.+||+++++..+-
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 68999998 45543 33322 2234688899999666654322111110 0003457899999987754432
Q ss_pred cCCCCCCCCCcccCCccccccce--eeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCC----------CCCCCe
Q 004456 225 CDLPPAEDIPVCYNSVREGMRSI--SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPA----------EGEKPE 292 (752)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~ 292 (752)
...... ..+++++ +++|||++ +|.++..+..+ ..+.|+++..++. ......
T Consensus 244 I~vg~~----------g~~P~~i~f~~~Pdg~~-aYV~~e~~~~~------Lss~V~v~~~d~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 244 LTLGEE----------NRMALELRPLHDPTKLM-GFINMVVSLKD------LSSSIWLWFYEDGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp EESCTT----------EEEEEEEEECSSTTCCE-EEEEEEEETTT------CCEEEEEEEEETTEEEEEEEEEECCEECC
T ss_pred EecCCC----------CCccceeEeeECCCCCE-EEEEEeeeccC------CCceEEEEEecCCceeEEEEEeCCCcccc
Confidence 222111 0124454 45999997 66665411100 1112332221000 000000
Q ss_pred -EEe---e----cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceecccccccccc---------CCC-C
Q 004456 293 -ILH---K----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY---------SDP-G 354 (752)
Q Consensus 293 -~l~---~----~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~---------~~~-~ 354 (752)
.+. . .......+.+||||+.|+++. ...+ .|.++++... ...+.+.....+... ... +
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn-rg~d--~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL-WGIG--EVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE-TTTT--EEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccCCCceeEEEECCCCCEEEEEe-CCCC--EEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCC
Confidence 010 0 023456788999999887765 3323 5777776533 233333222221000 000 1
Q ss_pred CCceeeCCCCCeEEEee
Q 004456 355 SPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 355 ~p~~~~s~dg~~l~~~~ 371 (752)
.-.+..||||++|+++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 12467899999999987
No 429
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.69 E-value=2.6e-06 Score=85.34 Aligned_cols=159 Identities=7% Similarity=-0.088 Sum_probs=77.0
Q ss_pred cceeccccCC---CCceEEEEecccCccccccccCccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeee
Q 004456 175 AVYTAVEPSP---DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWR 250 (752)
Q Consensus 175 ~~~~~~~~Sp---DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (752)
.....++||| ||+.|+-.+.++ .|.+||+.+++. +.+...... ...+...+||
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~-------------TIkIWDl~TGk~l~tL~g~~~~----------v~~v~~vafS 235 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMN-------------NIVIWNLKTGQLLKKMHIDDSY----------QASVCHKAYS 235 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTS-------------EEEEEETTTCCEEEEEECCC-------------CCCEEEEEE
T ss_pred CceeeEEeeccCCCCceEEEecCCC-------------cEEEEECCCCcEEEEEcCCCcc----------eeeeEEEEEC
Confidence 4455678888 778888777664 899999997754 444422111 0124456899
Q ss_pred eCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee---ccc-ceeeeeeecCCceEEEeeecccCceeE
Q 004456 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LDL-RFRSVSWCDDSLALVNETWYKTSQTRT 326 (752)
Q Consensus 251 pDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l 326 (752)
|||+. ++...................+.+++. .++....... ..+ ....+..+.++..++..+ ....|
T Consensus 236 pdG~~-lvs~s~~~~~w~laSGs~D~tIklWd~---~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS----~DgTI 307 (356)
T 2w18_A 236 EMGLL-FIVLSHPCAKESESLRSPVFQLIVINP---KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL----TSGTI 307 (356)
T ss_dssp ETTEE-EEEEC------------CCEEEEEEET---TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE----TTSCE
T ss_pred CCCCE-EEEeccCCCcceeeccCCCcEEEEEEC---CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc----CCCcE
Confidence 99986 444322111000001123335666776 3332211110 001 000111122244444433 23358
Q ss_pred EEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEee
Q 004456 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
.++|+.++. ....+..+.. . ..-.++|||||++|+..+
T Consensus 308 kIWDl~tGk-~l~tL~gH~~-~-----vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 308 AIWDLLLGQ-CTALLPPVSD-Q-----HWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEETTTCS-EEEEECCC---C-----CCCEEEECSSSSEEEEEC
T ss_pred EEEECCCCc-EEEEecCCCC-C-----eEEEEEECCCCCEEEEEE
Confidence 889988852 1222221111 0 111257999999998776
No 430
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.68 E-value=3.5e-07 Score=97.99 Aligned_cols=227 Identities=10% Similarity=0.011 Sum_probs=122.9
Q ss_pred eceeEecC-----CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEE-e-cCCcEEEEEe
Q 004456 33 INFVSWSP-----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-V-NNSTLLIFTI 105 (752)
Q Consensus 33 ~~~~~~SP-----DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pdg~~l~~~~ 105 (752)
..+|..|. ||+++.. .. .....|.++|+++.+..+++..+... ....+++ + ||+++|++..
T Consensus 87 ~hh~~~s~t~g~~DG~~lfV-nd--------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFLFM-ND--------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp BCCEEEEEETTEEEEEEEEE-EE--------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCccccCCCCCCcCCCEEEE-Ec--------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 45588888 9988855 32 45678999999998866654333211 2345666 5 9999998763
Q ss_pred cCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhh--hcccEEEEEcc-CC-CccccCCccceeccc
Q 004456 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY--YTTAQLVLGSL-DG-TAKDFGTPAVYTAVE 181 (752)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~i~~~~~-~G-~~~~l~~~~~~~~~~ 181 (752)
..... .++|++.+.. ...+.+-++|. +. -..++...+....+.
T Consensus 155 ~~~~p---------------------------------~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~ 201 (595)
T 1fwx_A 155 EDETP---------------------------------LVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCD 201 (595)
T ss_dssp CSCEE---------------------------------SSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEE
T ss_pred ccccc---------------------------------cCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceE
Confidence 21000 0011100000 02256778888 44 334444435677889
Q ss_pred cCCCCceEEEEecccCcccc-----------------------ccccCc--cccEEEEecCCceeEEecCCCCCCCCCcc
Q 004456 182 PSPDQKYVLITSMHRPYSYK-----------------------VPCARF--SQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (752)
Q Consensus 182 ~SpDGk~l~~~~~~~~~~~~-----------------------~~~~~~--~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 236 (752)
.||||+++++++...+.... .+.+.+ -+.+.+.|..+.+.+. ...
T Consensus 202 ~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~----------~~~ 271 (595)
T 1fwx_A 202 ADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL----------FTR 271 (595)
T ss_dssp ECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS----------SEE
T ss_pred ECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce----------eEE
Confidence 99999999999866422100 001110 1234455554311000 000
Q ss_pred cCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC------------CeEEeecccceeee
Q 004456 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK------------PEILHKLDLRFRSV 304 (752)
Q Consensus 237 ~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~l~~~~~~~~~~ 304 (752)
.......+..+.+||||++ ++.+.. ..+.+.++|+. +.. ...-..........
T Consensus 272 ~Ipvg~~PhGv~~sPDGk~-v~V~~~-----------~s~~VsVid~~---~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 272 YIPIANNPHGCNMAPDKKH-LCVAGK-----------LSPTVTVLDVT---RFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEEEESSCCCEEECTTSSE-EEEECT-----------TSSBEEEEEGG---GHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEecCCCceEEEEcCCCCE-EEEeCC-----------CCCeEEEEECc---ccccccccccCcccceEEEcCCCCCcceE
Confidence 1111223667999999997 555531 34477787772 110 11112333456778
Q ss_pred eeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 305 SWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 305 ~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
+|+||| . +|.+..-+. .+..++++.
T Consensus 337 aF~~dG-~-aY~t~~lds--qV~kwdi~~ 361 (595)
T 1fwx_A 337 AFDGRG-N-AYTSLFLDS--QVVKWNIED 361 (595)
T ss_dssp EECTTS-E-EEEEETTTT--EEEEEEHHH
T ss_pred EECCCC-e-EEEEEecCC--cEEEEEhhH
Confidence 899999 4 555544433 355555544
No 431
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.68 E-value=2e-08 Score=110.01 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=84.1
Q ss_pred EEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCC-CCCCCC
Q 004456 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPI-IGEGDK 572 (752)
Q Consensus 495 ~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~-~g~g~~ 572 (752)
+...+|.|..... ...++|+||++|||+|..++.... .+..........|+. .|++|+.++|+-. .|+...
T Consensus 81 l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~------~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~ 153 (579)
T 2bce_A 81 LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGA------NFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCcc------ccccccccChHHHhcCCCEEEEEeCCccccccCCcC
Confidence 5566777865321 123589999999998765432210 000000011234554 5799999888632 232211
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCC
Q 004456 573 LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGS 636 (752)
Q Consensus 573 ~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~--~p~~~~~~v~~~~~ 636 (752)
..........+.|..++++|+++.. ..|++||.|+|+|.||+++..++.. ....|+++|+.+|.
T Consensus 154 ~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 154 GDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1001111234779999999998852 3689999999999999999988764 34689999999875
No 432
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.67 E-value=6.4e-06 Score=86.95 Aligned_cols=201 Identities=6% Similarity=-0.042 Sum_probs=123.0
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.....+|+|||+ |.+ +. .....|++++.+++..+.+..... ... ++|+|+|+.|++....
T Consensus 132 ~P~~la~d~~g~-lyv-~d--------~~~~~I~~id~~~g~~~~~~~~~~-----~~~-ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLA-YQ--------RDDPRVRLISVDDNKVTTVHPGFK-----GGK-PAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CEEEEEECSTTE-EEE-EE--------TTTTEEEEEETTTTEEEEEEETCC-----BCB-CEECTTSSEEEEEBSS----
T ss_pred CceEEEEeCCCC-EEE-Ee--------cCCCcEEEEECCCCEEEEeeccCC-----CCc-eeEecCCCcEEEEecC----
Confidence 466788999997 433 32 344789999999888776643322 123 7999999988876321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC--Ccccc----C-CccceeccccCC
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG--TAKDF----G-TPAVYTAVEPSP 184 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G--~~~~l----~-~~~~~~~~~~Sp 184 (752)
....|+.++.++ ....+ . .......++++|
T Consensus 192 -------------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 192 -------------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp -------------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECT
T ss_pred -------------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeC
Confidence 002788888843 22333 2 225677899999
Q ss_pred CCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCcccccc-ceeeeeCCCceEEEEEec
Q 004456 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (752)
Q Consensus 185 DGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspDG~~~l~~~~~~ 263 (752)
++..|++... . ..|++++.+++....+......... ...+. .++|+|++.. ||++..
T Consensus 229 ~~g~lyv~d~-~------------~~I~~~d~~~~~~~~~~~~~~~g~~-------~~~P~~~ia~~p~~g~-lyv~d~- 286 (409)
T 3hrp_A 229 TEEWLYFVDS-N------------KNFGRFNVKTQEVTLIKQLELSGSL-------GTNPGPYLIYYFVDSN-FYMSDQ- 286 (409)
T ss_dssp TSSEEEEECT-T------------CEEEEEETTTCCEEEEEECCCCSCC-------CCSSCCEEEEETTTTE-EEEEET-
T ss_pred CCCeEEEEEC-C------------CcEEEEECCCCCEEEEecccccCCC-------CCCccccEEEeCCCCE-EEEEeC-
Confidence 7778888432 2 3799999987765544221111000 01134 8999997665 777742
Q ss_pred cCCCCccccCccceEEeccCCCCCCCCCeEEeecc---------------cceeeeeeecCCceEEEeeecccCceeEEE
Q 004456 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------LRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (752)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~ 328 (752)
....|++++. ++. ...+.... .....++++|||+ |+++. .. ...+|++
T Consensus 287 ----------~~~~I~~~~~---~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad-~~-~~~~I~~ 349 (409)
T 3hrp_A 287 ----------NLSSVYKITP---DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD-GF-KGYCLRK 349 (409)
T ss_dssp ----------TTTEEEEECT---TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE-TT-TTCEEEE
T ss_pred ----------CCCEEEEEec---CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe-CC-CCCEEEE
Confidence 3447888877 433 33332211 1245688999998 55543 20 3457999
Q ss_pred EcCCCC
Q 004456 329 VCPGSK 334 (752)
Q Consensus 329 ~~~~~~ 334 (752)
+++.++
T Consensus 350 ~~~~~G 355 (409)
T 3hrp_A 350 LDILDG 355 (409)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 996553
No 433
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.66 E-value=3.3e-08 Score=108.90 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=78.8
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCC-CCCCCCCC-------CCCchhHHH
Q 004456 511 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PIIGEGDK-------LPNDRFVEQ 581 (752)
Q Consensus 511 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~~g~g~~-------~~~~~~~~~ 581 (752)
.++|+||++|||++..++.... .+ ....|++ .|++|+.++|+ +..|+... .........
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~------~~------~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~ 206 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLD------IY------NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 206 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCG------GG------CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCCEEEEECCCcccCCCCCCC------CC------CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcc
Confidence 3589999999998765432210 01 1234554 78999998886 22232211 001111234
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004456 582 LVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 637 (752)
Q Consensus 582 ~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--p~~~~~~v~~~~~~ 637 (752)
.+.|...+++|+++.. ..|+++|.|+|+|.||++++.++... ...|+++|+.+|..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 5789999999999863 36899999999999999998887753 36899999999864
No 434
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.66 E-value=2.2e-08 Score=109.01 Aligned_cols=131 Identities=20% Similarity=0.239 Sum_probs=86.6
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhH-HHHH-hCCcEEEecCCCCCC-CCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFL-ARRFAVLAGPSIPII-GEG 570 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~G~~v~~~~~~~~~-g~g 570 (752)
-+...+|.|+...+. .++|+||++|||++..++.. .+.. ..++ ..++ ..|++|+.++|+... |+.
T Consensus 97 cl~l~v~~P~~~~~~--~~~Pv~v~iHGGg~~~g~~~--------~~~~--~~l~~~~~~~~~~~vvv~~nYRl~~~gf~ 164 (534)
T 1llf_A 97 CLTINVVRPPGTKAG--ANLPVMLWIFGGGFEIGSPT--------IFPP--AQMVTKSVLMGKPIIHVAVNYRVASWGFL 164 (534)
T ss_dssp CCEEEEEECTTCCTT--CCEEEEEEECCSTTTSCCGG--------GSCC--HHHHHHHHHTTCCCEEEEECCCCHHHHHC
T ss_pred CeEEEEEECCCCCCC--CCceEEEEEeCCCcccCCCc--------ccCc--hHHHHHHHhcCCCEEEEEeCCCCCCCCCC
Confidence 366778889764322 35899999999987654321 1111 1112 2222 468999998886432 221
Q ss_pred CCCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEccCC
Q 004456 571 DKLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS 636 (752)
Q Consensus 571 ~~~~--~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--------p~~~~~~v~~~~~ 636 (752)
.... ........+.|..++++|+++.. ..|++||.|+|+|+||++++.++... +..|+++|+.+|.
T Consensus 165 ~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 165 AGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp CSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 1100 00122355889999999998852 36899999999999999888777653 4579999999984
No 435
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.66 E-value=3.3e-08 Score=105.08 Aligned_cols=109 Identities=7% Similarity=-0.015 Sum_probs=76.4
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhC-CcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEA 588 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~ 588 (752)
..|+||++||.+.. ....+....+..|+++ ||.|++ .+.+|+|.+.... .......+|+.+
T Consensus 69 ~~p~vvliHG~~~~-------------~~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~G~S~~~~~~~~~~~~~~dl~~ 132 (452)
T 1w52_X 69 SRKTHFVIHGFRDR-------------GEDSWPSDMCKKILQVETTNCIS---VDWSSGAKAEYTQAVQNIRIVGAETAY 132 (452)
T ss_dssp TSCEEEEECCTTCC-------------SSSSHHHHHHHHHHTTSCCEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCC-------------CCchHHHHHHHHHHhhCCCEEEE---EecccccccccHHHHHhHHHHHHHHHH
Confidence 36899999995311 0011111134566654 999999 5566776653211 122345678888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+++|.++..++.+++.|+||||||++|+.++.++|++++++|+++|.
T Consensus 133 ~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1w52_X 133 LIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA 180 (452)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccc
Confidence 888887653455689999999999999999999999999999999875
No 436
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.64 E-value=5.9e-06 Score=84.65 Aligned_cols=237 Identities=7% Similarity=0.005 Sum_probs=125.1
Q ss_pred cEEEEEcc-CCCccccCC-c--cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCc--eeEEecCCCCC
Q 004456 157 AQLVLGSL-DGTAKDFGT-P--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~-~G~~~~l~~-~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~ 230 (752)
..|+++|. +|+..+... . .....++++|||+ |+++.... ..|++++.+++ ....+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~------------~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVAL------------HQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETTT------------TEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECCC------------CEEEEEeCCCCeEEEEEecccCCC
Confidence 57999999 576543322 2 4677899999999 66654432 47899998876 33433221100
Q ss_pred CCCCcccCCccccccceeeee-CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc----------c
Q 004456 231 EDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD----------L 299 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wsp-DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~----------~ 299 (752)
... ......+..++++| +|+ ||++... ....|++++. ++.....+.... .
T Consensus 136 g~~----~~~~~~P~~ia~~~~~g~--lyv~d~~----------~~~~I~~~~~---~g~~~~~~~~~g~~~~~~~~~~~ 196 (329)
T 3fvz_A 136 GSD----QNHFCQPTDVAVEPSTGA--VFVSDGY----------CNSRIVQFSP---SGKFVTQWGEESSGSSPRPGQFS 196 (329)
T ss_dssp CCS----TTCCSSEEEEEECTTTCC--EEEEECS----------SCCEEEEECT---TSCEEEEECEECCSSSCCTTEES
T ss_pred CCC----ccccCCCcEEEEeCCCCe--EEEEeCC----------CCCeEEEEcC---CCCEEEEeccCCCCCCCCCcccC
Confidence 000 01112366899999 565 7777421 2347888876 444434332211 1
Q ss_pred ceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcce
Q 004456 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (752)
Q Consensus 300 ~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~ 379 (752)
....++++||+..|+++.. ...+|.+++++++. ....+....... ....++++| | +++...+
T Consensus 197 ~p~gia~d~~~g~l~v~d~---~~~~I~~~~~~~G~-~~~~~~~~~~~~-----~~~~~~~~p-g--~~~~~~g------ 258 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADR---ENGRIQCFKTDTKE-FVREIKHASFGR-----NVFAISYIP-G--FLFAVNG------ 258 (329)
T ss_dssp CEEEEEEETTTTEEEEEET---TTTEEEEEETTTCC-EEEEECCTTTTT-----CEEEEEEET-T--EEEEEEC------
T ss_pred CCcEEEEECCCCEEEEEEC---CCCEEEEEECCCCc-EEEEEeccccCC-----CcceeeecC-C--EEEEeCC------
Confidence 2567889999655666532 33468999988531 111221111100 111244666 3 2222211
Q ss_pred EEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEEC
Q 004456 380 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (752)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~ 459 (752)
.-+........++++|..+|+....+..... .+..+. .+++++|| .|+++.... ..|+++++
T Consensus 259 ------~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~~p~-------~ia~~~dG-~lyvad~~~---~~I~~~~~ 320 (329)
T 3fvz_A 259 ------KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-HFDMPH-------DIVASEDG-TVYIGDAHT---NTVWKFTL 320 (329)
T ss_dssp ------CCCTTCSCCCCEEEEETTTCCEEEEECCSSS-CCSSEE-------EEEECTTS-EEEEEESSS---CCEEEEEE
T ss_pred ------CEEeccCCCcEEEEEEcCCCeEEEEEcCCCC-ccCCee-------EEEECCCC-CEEEEECCC---CEEEEEeC
Confidence 1111122334699999988887665432111 111122 35789998 555544332 25777775
Q ss_pred CC
Q 004456 460 PL 461 (752)
Q Consensus 460 ~~ 461 (752)
++
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 437
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.64 E-value=5.7e-06 Score=85.24 Aligned_cols=180 Identities=11% Similarity=0.067 Sum_probs=122.8
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+.+++++.....+..... ....++|++.++.|+++-.
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~-----~~~~l~~d~~~~~ly~~D~---------------------------------- 92 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLE-----NAIALDFHHRRELVFWSDV---------------------------------- 92 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCS-----CEEEEEEETTTTEEEEEET----------------------------------
T ss_pred ccceEEEeCCCCeeEEeecCCC-----ceEEEEEeccccEEEEEec----------------------------------
Confidence 3678899988877666543322 2457899999888988721
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-CccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
....|++++++| ..+.+.. . .....+++.+.++.|+++.... ..|++.+++
T Consensus 93 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~------------~~I~~~~~d 146 (349)
T 3v64_C 93 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLD 146 (349)
T ss_dssp --------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEEEETT
T ss_pred --------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC------------CeEEEEcCC
Confidence 115799999976 4444432 2 4566888999899998886543 478899998
Q ss_pred CceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee-
Q 004456 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK- 296 (752)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~- 296 (752)
++..+.+..... ..+++++++|++.. |||+... ....|++++. ++...+.+..
T Consensus 147 G~~~~~l~~~~l------------~~P~~iavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 200 (349)
T 3v64_C 147 GAHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSM---DGSGRRIIADT 200 (349)
T ss_dssp SCSCEEEECTTC------------SCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEESCCS
T ss_pred CCceEEEEeCCC------------CCcceEEEecCcCe-EEEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 876555543211 12568999998877 8888521 1257899888 5655555543
Q ss_pred cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 297 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
.-.....++++|+++.|+++.. ....|+++++++.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~ 235 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGS 235 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred CCCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCC
Confidence 2334567899999998888642 3357999999873
No 438
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.62 E-value=2.4e-07 Score=92.06 Aligned_cols=119 Identities=11% Similarity=-0.061 Sum_probs=77.2
Q ss_pred EEEEEEEeCCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCC
Q 004456 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 573 (752)
Q Consensus 494 ~~~~~l~~P~~~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 573 (752)
.+...++.|.. .+. +..+.||++||.+... ...|. ..+...|.++||.|++++ ..|+|...
T Consensus 49 ~L~~~i~~p~~-~~~--~~~~pVVLvHG~~~~~----------~~~w~---~~l~~~L~~~Gy~V~a~D---lpG~G~~~ 109 (316)
T 3icv_A 49 VLDAGLTCQGA-SPS--SVSKPILLVPGTGTTG----------PQSFD---SNWIPLSAQLGYTPCWIS---PPPFMLND 109 (316)
T ss_dssp HHHHTEEETTB-BTT--BCSSEEEEECCTTCCH----------HHHHT---TTHHHHHHHTTCEEEEEC---CTTTTCSC
T ss_pred hHhhhEeCCCC-CCC--CCCCeEEEECCCCCCc----------HHHHH---HHHHHHHHHCCCeEEEec---CCCCCCCc
Confidence 34445555633 221 1246789999953110 00111 135678888999999944 45555431
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCC
Q 004456 574 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYN 638 (752)
Q Consensus 574 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---p~~~~~~v~~~~~~~ 638 (752)
.....+++.+.++.+.+... .+++.|+||||||.++..++.+. +++++.+|++++...
T Consensus 110 -----~~~~~~~la~~I~~l~~~~g--~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 110 -----TQVNTEYMVNAITTLYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred -----HHHHHHHHHHHHHHHHHHhC--CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 23445667777877776532 36899999999999998777764 589999999998754
No 439
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.61 E-value=1.4e-07 Score=94.18 Aligned_cols=103 Identities=14% Similarity=-0.025 Sum_probs=69.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.||++||.+.... . .. ...+......|.++||.|+++ +.+|+|.+. .......+++.++++.
T Consensus 7 ~~~vvlvHG~~~~~~-----~-~~----~~~~~~~~~~L~~~G~~v~~~---d~~g~g~s~---~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDN-----I-LG----VDYWFGIPSALRRDGAQVYVT---EVSQLDTSE---VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSE-----E-TT----EESSTTHHHHHHHTTCCEEEE---CCCSSSCHH---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCcc-----c-cc----cccHHHHHHHHHhCCCEEEEE---eCCCCCCch---hhHHHHHHHHHHHHHH
Confidence 588999999632110 0 00 011224677888999999994 445655431 2233444444444443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
+ +.+++.|+||||||.++..++.++|+.++++|++++..
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 24689999999999999999999999999999999853
No 440
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.61 E-value=4.5e-05 Score=76.42 Aligned_cols=192 Identities=14% Similarity=0.093 Sum_probs=111.8
Q ss_pred ceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 31 ~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.......++|||+..+- . .....|++++.+ ++.+.+...... ..+..+.+++||+ |+++..
T Consensus 15 ~~~~~i~~d~~g~l~v~--~--------~~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~-l~v~~~---- 75 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWIT--Q--------HKANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGE-VWFTEN---- 75 (299)
T ss_dssp CCEEEEEECTTSCEEEE--E--------TTTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSC-EEEEET----
T ss_pred CCccceEECCCCCEEEE--e--------cCCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCC-EEEeCC----
Confidence 36788899999974332 1 234689999988 665544321111 1355778889988 444321
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCccccCC--c-cceeccccCCCCc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQK 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~~l~~--~-~~~~~~~~SpDGk 187 (752)
....|++++.+|+.+.+.. . .....+.++|||+
T Consensus 76 --------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~ 111 (299)
T 2z2n_A 76 --------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD 111 (299)
T ss_dssp --------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC
T ss_pred --------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC
Confidence 0146888888765443321 2 4667888999995
Q ss_pred eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|++..... ..+++++.++. ...+..... ...+..+.++|||+ +++...
T Consensus 112 -l~v~~~~~------------~~i~~~d~~g~-~~~~~~~~~-----------~~~~~~i~~~~~g~--l~v~~~----- 159 (299)
T 2z2n_A 112 -IWFTEMNG------------NRIGRITDDGK-IREYELPNK-----------GSYPSFITLGSDNA--LWFTEN----- 159 (299)
T ss_dssp -EEEEETTT------------TEEEEECTTCC-EEEEECSST-----------TCCEEEEEECTTSC--EEEEET-----
T ss_pred -EEEEecCC------------ceEEEECCCCC-EEEecCCCC-----------CCCCceEEEcCCCC--EEEEeC-----
Confidence 44543322 36888888443 333221110 11256789999996 666641
Q ss_pred CccccCccceEEeccCCCCCCCCCeEE--eecccceeeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEKPEIL--HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
..+.|++++. ++ ....+ .........++++++|+ |+++.. ....|++++.
T Consensus 160 ------~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~~~ 211 (299)
T 2z2n_A 160 ------QNNAIGRITE---SG-DITEFKIPTPASGPVGITKGNDDA-LWFVEI---IGNKIGRITT 211 (299)
T ss_dssp ------TTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECT
T ss_pred ------CCCEEEEEcC---CC-cEEEeeCCCCCCcceeEEECCCCC-EEEEcc---CCceEEEECC
Confidence 2346788876 32 33332 12233456788899987 444331 2346999998
No 441
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.61 E-value=9.8e-06 Score=82.17 Aligned_cols=236 Identities=9% Similarity=0.058 Sum_probs=126.2
Q ss_pred cEEEEEcc-CCCccccCC-----c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEe-cCCC
Q 004456 157 AQLVLGSL-DGTAKDFGT-----P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLP 228 (752)
Q Consensus 157 ~~i~~~~~-~G~~~~l~~-----~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~ 228 (752)
..|+++++ +|+.+.+.. . .....+.++||+..|++.... ..|++++.+ ++.+.+ ....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------------~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------------LGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------------TEEEEEETT-SCEEECCSBCT
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------------CCEEEEeCC-CCEEEEEeccC
Confidence 57899997 666655543 2 556789999993345554332 268889988 555544 3221
Q ss_pred CCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC----CccccCccceEEeccCCCCCCCCCeEEeecccceeee
Q 004456 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD----ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSV 304 (752)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 304 (752)
.. . ....+..++++|||+ ++++....... ..........|+.++. + ++...+.........+
T Consensus 112 ~~--~------~~~~~~~i~~d~~g~--l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~-g~~~~~~~~~~~~~~i 177 (314)
T 1pjx_A 112 EG--R------RMQGCNDCAFDYEGN--LWITAPAGEVAPADYTRSMQEKFGSIYCFTT---D-GQMIQVDTAFQFPNGI 177 (314)
T ss_dssp TS--C------BCBCCCEEEECTTSC--EEEEECBCBCTTSCCCBTTSSSCEEEEEECT---T-SCEEEEEEEESSEEEE
T ss_pred CC--c------cccCCcCEEECCCCC--EEEEecCcccccccccccccCCCCeEEEECC---C-CCEEEeccCCCCcceE
Confidence 10 0 012356899999997 66665322100 0000112357888886 4 4444444444445678
Q ss_pred eee----cCCceEEEeeecccCceeEEEEcCC-CCCccce-eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcc
Q 004456 305 SWC----DDSLALVNETWYKTSQTRTWLVCPG-SKDVAPR-VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 378 (752)
Q Consensus 305 ~~s----pDg~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~ 378 (752)
+|+ |||+.|++... ....|++++++ ++..... .+....... .. ..-.++++++|+.. +....
T Consensus 178 ~~~~~~d~dg~~l~v~~~---~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~--~p~~i~~d~~G~l~-v~~~~----- 245 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAET---PTKKLWSYDIKGPAKIENKKVWGHIPGTH-EG--GADGMDFDEDNNLL-VANWG----- 245 (314)
T ss_dssp EEEECTTSCEEEEEEEET---TTTEEEEEEEEETTEEEEEEEEEECCCCS-SC--EEEEEEEBTTCCEE-EEEET-----
T ss_pred EEecccCCCCCEEEEEEC---CCCeEEEEECCCCCccccceEEEECCCCC-CC--CCCceEECCCCCEE-EEEcC-----
Confidence 899 99987776542 22468888865 2210001 111110000 00 00115678888633 33211
Q ss_pred eEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 379 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 379 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
...|+++|.++|+.......... .+. .+++++||+.|+++... ...|++++
T Consensus 246 ---------------~~~i~~~d~~~g~~~~~~~~~~~----~~~-------~i~~~~dg~~l~v~~~~---~~~l~~~~ 296 (314)
T 1pjx_A 246 ---------------SSHIEVFGPDGGQPKMRIRCPFE----KPS-------NLHFKPQTKTIFVTEHE---NNAVWKFE 296 (314)
T ss_dssp ---------------TTEEEEECTTCBSCSEEEECSSS----CEE-------EEEECTTSSEEEEEETT---TTEEEEEE
T ss_pred ---------------CCEEEEEcCCCCcEeEEEeCCCC----Cce-------eEEECCCCCEEEEEeCC---CCeEEEEe
Confidence 12588999876665333222111 122 24678999877666432 24688888
Q ss_pred CCC
Q 004456 459 WPL 461 (752)
Q Consensus 459 ~~~ 461 (752)
++.
T Consensus 297 ~~~ 299 (314)
T 1pjx_A 297 WQR 299 (314)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
No 442
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.60 E-value=8e-06 Score=82.83 Aligned_cols=239 Identities=10% Similarity=0.072 Sum_probs=134.6
Q ss_pred ceeEEeecCCCCCCCCceeecCCC----CCceeceeEecCC-CCeEEEeeccccccccccCcceEEEEEcccCcceec-c
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYP----DGAKINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-F 78 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~----~~~~~~~~~~SPD-G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~l-t 78 (752)
.+|+.+++.. |+.+.+.. + .........++|| |+ |.++. ....|++++.+ ++.+.+ .
T Consensus 46 ~~i~~~d~~~----g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~-l~v~~----------~~~~l~~~d~~-g~~~~~~~ 108 (314)
T 1pjx_A 46 GEILRIDLKT----GKKTVICK-PEVNGYGGIPAGCQCDRDANQ-LFVAD----------MRLGLLVVQTD-GTFEEIAK 108 (314)
T ss_dssp CEEEEECTTT----CCEEEEEC-CEETTEECCEEEEEECSSSSE-EEEEE----------TTTEEEEEETT-SCEEECCS
T ss_pred CEEEEEeCCC----CcEEEEEe-cccCCCCCCCceEEEecCCCc-EEEEE----------CCCCEEEEeCC-CCEEEEEe
Confidence 3466666555 76666542 1 1124677899999 65 33321 12479999988 776665 3
Q ss_pred CCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccE
Q 004456 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (752)
..........+..+.++|||+. +++........ ... . . ........
T Consensus 109 ~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~~~-------~~~-----~-~--------------------~~~~~~~~ 154 (314)
T 1pjx_A 109 KDSEGRRMQGCNDCAFDYEGNL-WITAPAGEVAP-------ADY-----T-R--------------------SMQEKFGS 154 (314)
T ss_dssp BCTTSCBCBCCCEEEECTTSCE-EEEECBCBCTT-------SCC-----C-B--------------------TTSSSCEE
T ss_pred ccCCCccccCCcCEEECCCCCE-EEEecCccccc-------ccc-----c-c--------------------cccCCCCe
Confidence 3211110112457899999974 44422110000 000 0 0 00002257
Q ss_pred EEEEccCCCccccCCc-cceeccccC----CCCceEEEEecccCccccccccCccccEEEEecC-CceeE---EecCCCC
Q 004456 159 LVLGSLDGTAKDFGTP-AVYTAVEPS----PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVR---ELCDLPP 229 (752)
Q Consensus 159 i~~~~~~G~~~~l~~~-~~~~~~~~S----pDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~---~l~~~~~ 229 (752)
|+.++.+|+...+... .....++|+ |||+.|++..... ..|++++.+ .+... .+...+.
T Consensus 155 l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~------------~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 155 IYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT------------KKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp EEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT------------TEEEEEEEEETTEEEEEEEEEECCC
T ss_pred EEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC------------CeEEEEECCCCCccccceEEEECCC
Confidence 8999887765554433 456688999 9999888875432 378888865 33221 1111111
Q ss_pred CCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC-CCCCeEEeecccceeeeeeec
Q 004456 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHKLDLRFRSVSWCD 308 (752)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~~~~~sp 308 (752)
.. ...+..+++++||+ |++... ..+.|++++. + +.....+.........++++|
T Consensus 223 ~~---------~~~p~~i~~d~~G~--l~v~~~-----------~~~~i~~~d~---~~g~~~~~~~~~~~~~~~i~~~~ 277 (314)
T 1pjx_A 223 TH---------EGGADGMDFDEDNN--LLVANW-----------GSSHIEVFGP---DGGQPKMRIRCPFEKPSNLHFKP 277 (314)
T ss_dssp CS---------SCEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECT---TCBSCSEEEECSSSCEEEEEECT
T ss_pred CC---------CCCCCceEECCCCC--EEEEEc-----------CCCEEEEEcC---CCCcEeEEEeCCCCCceeEEECC
Confidence 10 01245789999997 665532 2347888887 4 333444443445677888999
Q ss_pred CCceEEEeeecccCceeEEEEcCCCC
Q 004456 309 DSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
||+.|+++... ...|++++++..
T Consensus 278 dg~~l~v~~~~---~~~l~~~~~~~~ 300 (314)
T 1pjx_A 278 QTKTIFVTEHE---NNAVWKFEWQRN 300 (314)
T ss_dssp TSSEEEEEETT---TTEEEEEECSSC
T ss_pred CCCEEEEEeCC---CCeEEEEeCCCC
Confidence 99977776522 235889887653
No 443
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.60 E-value=2.4e-05 Score=79.36 Aligned_cols=224 Identities=9% Similarity=0.048 Sum_probs=135.5
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCC----ceeEEecCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~~ 230 (752)
..|..+++++ +...+... .....+.|+++++.|+++.... ..|+.+++++ ...+.+....
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~------------~~I~~~~~~g~~~~~~~~~~~~~~-- 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD-- 75 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEEECSS--
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCC------------CcEEEEECCCCCCCcccEEEEeCC--
Confidence 4688999955 54444333 6778999999999999986543 4788898886 3323222111
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee-cccceeeeeeecC
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDD 309 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~~~spD 309 (752)
...+..+++++.+.. |||+.. ....|.+++. ++...+.+.. .......++..|+
T Consensus 76 ----------~~~p~glavd~~~~~-ly~~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp~ 130 (316)
T 1ijq_A 76 ----------IQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDPV 130 (316)
T ss_dssp ----------CSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEETT
T ss_pred ----------CCCcCEEEEeecCCe-EEEEEC-----------CCCEEEEEeC---CCCceEEEEECCCCCcceEEeCCC
Confidence 012457899887776 888852 3447888887 5555555554 3345677889998
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 389 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~ 389 (752)
+..|+++... ....|+++++++. ..+.+....... ...++++++++.|+++.
T Consensus 131 ~g~ly~~d~~--~~~~I~~~~~dG~--~~~~~~~~~~~~------P~gla~d~~~~~lY~~D------------------ 182 (316)
T 1ijq_A 131 HGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQW------PNGITLDLLSGRLYWVD------------------ 182 (316)
T ss_dssp TTEEEEEECS--SSCEEEEEETTSC--CEEEEECSSCSC------EEEEEEETTTTEEEEEE------------------
T ss_pred CCEEEEEccC--CCCeEEEEcCCCC--CeEEEEECCCCC------ceEEEEeccCCEEEEEE------------------
Confidence 8888876532 2357999999873 223332222111 11267899999998886
Q ss_pred CCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 390 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 390 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
.....|+++|+++...+.+...... +.....+ ++ +++.|+++... ...|++++..+|+
T Consensus 183 --~~~~~I~~~d~dg~~~~~~~~~~~~--~~~P~gi-------av--~~~~ly~~d~~---~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 183 --SKLHSISSIDVNGGNRKTILEDEKR--LAHPFSL-------AV--FEDKVFWTDII---NEAIFSANRLTGS 240 (316)
T ss_dssp --TTTTEEEEEETTSCSCEEEEECTTT--TSSEEEE-------EE--ETTEEEEEETT---TTEEEEEETTTCC
T ss_pred --CCCCeEEEEecCCCceEEEeecCCc--cCCcEEE-------EE--ECCEEEEEECC---CCeEEEEeCCCCc
Confidence 2234699999876555544332111 0011121 23 46677776532 4568888876554
No 444
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.60 E-value=2.1e-06 Score=88.00 Aligned_cols=219 Identities=10% Similarity=0.029 Sum_probs=119.6
Q ss_pred eeceeEecCCCCeEEEeeccccccc---------------cccCcceEEEEEcccCcceeccCCCCccccccccceEEec
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDN---------------VSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN 96 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~---------------~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp 96 (752)
.+...+++|||+.++..... .... .......|++++.++|+......... +. ....++++|
T Consensus 25 ~v~~va~d~~G~l~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--~~-~p~gia~d~ 100 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGD-HVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL--FY-LPHGLSIDT 100 (329)
T ss_dssp CEEEEEECTTCCEEEEECTT-CCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT--CS-SEEEEEECT
T ss_pred CceEEEECCCCCEEEEeCCC-CeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc--cC-CceEEEECC
Confidence 47789999999876553210 0000 00011369999988777654322111 11 245778999
Q ss_pred CCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCC---ccccCC
Q 004456 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT---AKDFGT 173 (752)
Q Consensus 97 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~---~~~l~~ 173 (752)
||+ |+++.. ....|++++.+|. ...+..
T Consensus 101 ~g~-l~v~d~------------------------------------------------~~~~v~~~~~~g~~~~~~~~~~ 131 (329)
T 3fvz_A 101 DGN-YWVTDV------------------------------------------------ALHQVFKLDPHSKEGPLLILGR 131 (329)
T ss_dssp TSC-EEEEET------------------------------------------------TTTEEEEECTTCSSCCSEEESB
T ss_pred CCC-EEEEEC------------------------------------------------CCCEEEEEeCCCCeEEEEEecc
Confidence 999 555421 1157888888774 222221
Q ss_pred ---------c-cceeccccCCCCceEEEEec-ccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccc
Q 004456 174 ---------P-AVYTAVEPSPDQKYVLITSM-HRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (752)
Q Consensus 174 ---------~-~~~~~~~~SpDGk~l~~~~~-~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (752)
. .....++++|++..|++... .. ..|.+++.++.....+....... .+ ......
T Consensus 132 ~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~------------~~I~~~~~~g~~~~~~~~~g~~~-~~--~~~~~~ 196 (329)
T 3fvz_A 132 SMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN------------SRIVQFSPSGKFVTQWGEESSGS-SP--RPGQFS 196 (329)
T ss_dssp TTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC------------CEEEEECTTSCEEEEECEECCSS-SC--CTTEES
T ss_pred cCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC------------CeEEEEcCCCCEEEEeccCCCCC-CC--CCcccC
Confidence 1 35678999995556666542 22 47899998777655543221110 00 000112
Q ss_pred cccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC-CCCCeEEee--cccceeeeeeecCCceEEEeee-
Q 004456 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHK--LDLRFRSVSWCDDSLALVNETW- 318 (752)
Q Consensus 243 ~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~- 318 (752)
.+..++++||+.. ||++.. ..+.|.+++. + +.....+.. .......++++| |..+.....
T Consensus 197 ~p~gia~d~~~g~-l~v~d~-----------~~~~I~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 197 VPHSLALVPHLDQ-LCVADR-----------ENGRIQCFKT---DTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEEEEEEETTTTE-EEEEET-----------TTTEEEEEET---TTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred CCcEEEEECCCCE-EEEEEC-----------CCCEEEEEEC---CCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 2568999999655 777642 3447888887 4 333333321 223456778888 322222111
Q ss_pred --cccCceeEEEEcCCCC
Q 004456 319 --YKTSQTRTWLVCPGSK 334 (752)
Q Consensus 319 --~~~~~~~l~~~~~~~~ 334 (752)
.+.....++++++.++
T Consensus 261 ~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp CTTCSCCCCEEEEETTTC
T ss_pred EeccCCCcEEEEEEcCCC
Confidence 1123346888887774
No 445
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.57 E-value=2.3e-05 Score=79.38 Aligned_cols=223 Identities=8% Similarity=-0.010 Sum_probs=138.6
Q ss_pred cEEEEEccCCC---ccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCcee--EEecCCCCC
Q 004456 157 AQLVLGSLDGT---AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~~G~---~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~ 230 (752)
..|..+++++. ...+... .....+.|.+.++.|+++-... ..|+.++++++.. ..+...-
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~------------~~I~r~~~~g~~~~~~~~~~~l-- 78 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQNVVVSGL-- 78 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTT------------TEEEEEETTSSSCCCEEEEECC--
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCC------------CcEEEEEccCCCceEEEEcCCC--
Confidence 68999999763 2222222 5566889999999998885543 4788888887632 1111110
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe-ecccceeeeeeecC
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDD 309 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~~~spD 309 (752)
..+..+++.+.+.. |||+.. ..+.|.+++. ++...+.+. ........+++.|.
T Consensus 79 -----------~~p~glavd~~~g~-ly~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavdp~ 132 (318)
T 3sov_A 79 -----------LSPDGLACDWLGEK-LYWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALDPS 132 (318)
T ss_dssp -----------SCCCEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEEGG
T ss_pred -----------CCccEEEEEcCCCe-EEEEEC-----------CCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEeCC
Confidence 12457899887776 888852 3447888888 565555554 33345677889998
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 389 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~ 389 (752)
+..|+++.+. ....|+++++++. ..+.+....... ...++++++++.|+++.
T Consensus 133 ~g~ly~td~~--~~~~I~r~~~dG~--~~~~~~~~~l~~------Pnglavd~~~~~lY~aD------------------ 184 (318)
T 3sov_A 133 SGFMYWTDWG--EVPKIERAGMDGS--SRFIIINSEIYW------PNGLTLDYEEQKLYWAD------------------ 184 (318)
T ss_dssp GTEEEEEECS--SSCEEEEEETTSC--SCEEEECSSCSC------EEEEEEETTTTEEEEEE------------------
T ss_pred CCEEEEEecC--CCCEEEEEEcCCC--CeEEEEECCCCC------ccEEEEeccCCEEEEEE------------------
Confidence 8878876532 2457999999874 333332222211 11277899999999986
Q ss_pred CCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCee
Q 004456 390 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (752)
Q Consensus 390 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~ 465 (752)
.....|+++|++++..+.+...... .. ..+.-+++.++++.. ....|++++..+|+..
T Consensus 185 --~~~~~I~~~d~dG~~~~~~~~~~~~----~P---------~glav~~~~lywtd~---~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 185 --AKLNFIHKSNLDGTNRQAVVKGSLP----HP---------FALTLFEDILYWTDW---STHSILACNKYTGEGL 242 (318)
T ss_dssp --TTTTEEEEEETTSCSCEEEECSCCS----CE---------EEEEEETTEEEEEET---TTTEEEEEETTTCCSC
T ss_pred --CCCCEEEEEcCCCCceEEEecCCCC----Cc---------eEEEEeCCEEEEEec---CCCeEEEEECCCCCce
Confidence 2234699999876555555432211 11 123335677877743 3457888998666543
No 446
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.57 E-value=4.6e-08 Score=107.42 Aligned_cols=129 Identities=20% Similarity=0.174 Sum_probs=84.0
Q ss_pred EEEEEEEeCCCCCC-CCCCCceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCC-CCC
Q 004456 494 PLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPII-GEG 570 (752)
Q Consensus 494 ~~~~~l~~P~~~~~-~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~-g~g 570 (752)
-+...+|.|..... ....++|+||++|||++..++.. .+.. ..|++ .|++|+.++|+-.. |+.
T Consensus 111 cL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~--------~~~~------~~la~~~~~vvv~~~YRl~~~Gfl 176 (574)
T 3bix_A 111 CLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGN--------LYDG------SVLASYGNVIVITVNYRLGVLGFL 176 (574)
T ss_dssp CCEEEEEEEC--------CCEEEEEECCCSSSSSCCGG--------GSCC------HHHHHHHTCEEEEECCCCHHHHHC
T ss_pred CCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCC--------ccCc------hhhhccCCEEEEEeCCcCcccccC
Confidence 36667788875321 01235899999999987654321 1211 24555 46999998886322 221
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCC
Q 004456 571 DKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 636 (752)
Q Consensus 571 ~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~p---~~~~~~v~~~~~ 636 (752)
............+.|..++++|+++.. ..|+++|.|+|+|.||.+++.++.... ..|+.+|+.+|.
T Consensus 177 ~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 177 STGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred cCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 111111112345789999999999852 368999999999999999998886543 569999998864
No 447
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=2.6e-05 Score=81.93 Aligned_cols=225 Identities=8% Similarity=0.023 Sum_probs=139.5
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCce----eEEecCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~ 230 (752)
..|..+++++ ....+... .....++|+++++.|+++.... ..|+.+++++.. ...+....
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~------------~~I~~~~~~g~~~~~~~~~~~~~~-- 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD-- 157 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC------CCCEEEECSS--
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCC------------CeEEEEEcccCCCCCcceEEEeCC--
Confidence 6899999966 55555444 7788999999999999986543 378888887632 22222111
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee-cccceeeeeeecC
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDD 309 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~~~spD 309 (752)
...+..+++.+.++. |||+.. ....|.++++ ++...+.+.. .......++..|.
T Consensus 158 ----------~~~p~glavD~~~~~-lY~~d~-----------~~~~I~~~~~---~g~~~~~l~~~~~~~P~~iavdp~ 212 (400)
T 3p5b_L 158 ----------IQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDPV 212 (400)
T ss_dssp ----------CSCEEEEEEETTTTE-EEEEET-----------TTTEEEEECT---TTCSEEEEEECSSCCEEEEEEETT
T ss_pred ----------CCCcccEEEEecCCc-eEEEEC-----------CCCeEEEEeC---CCCceEEEEeCCCCCcceEEEecc
Confidence 012557888887776 898852 3447888888 6666666654 3334677889998
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 389 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~ 389 (752)
+..|+++.+.. ...|+++++++. ..+.+....... ..-++++++++.|+++.
T Consensus 213 ~g~ly~td~~~--~~~I~~~~~dG~--~~~~~~~~~l~~------P~glavd~~~~~lY~aD------------------ 264 (400)
T 3p5b_L 213 HGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQW------PNGITLDLLSGRLYWVD------------------ 264 (400)
T ss_dssp TTEEEEEECSS--SCCEEEEETTSC--SCEEEECSSCSC------EEEEEEETTTTEEEEEE------------------
T ss_pred cCeEEEEeCCC--CCEEEEEeCCCC--ccEEEEECCCCc------eEEEEEEeCCCEEEEEE------------------
Confidence 88888875332 347999999874 333443222211 01267899998898886
Q ss_pred CCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCe
Q 004456 390 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (752)
Q Consensus 390 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~ 464 (752)
.....|+++|++++..+.+...... .....++..+++.|+++... ...|++++..+|+.
T Consensus 265 --~~~~~I~~~d~dG~~~~~~~~~~~~-----------l~~P~gl~v~~~~lywtd~~---~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 265 --SKLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSD 323 (400)
T ss_dssp --TTTTEEEEEETTSCCCEEEEECSST-----------TSSEEEEEEETTEEEEEESS---SCSEEEEESSSCCC
T ss_pred --CCCCEEEEEeCCCCccEEEEeCCCC-----------CCCCEEEEEeCCEEEEecCC---CCeEEEEEcCCCCc
Confidence 2234699999876655555433211 01112344467778777633 34588888655543
No 448
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.56 E-value=1.3e-05 Score=81.41 Aligned_cols=180 Identities=12% Similarity=-0.049 Sum_probs=118.8
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|.++++++++...+..... ....+.|+++++.|+++-.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~-----~p~g~~~d~~~~~ly~~D~---------------------------------- 49 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL---------------------------------- 49 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEET----------------------------------
T ss_pred CCeEEEEECCCcceEehhcCCC-----ceEEEEEEeCCCEEEEEEC----------------------------------
Confidence 3679999999887665532221 2457899999888988722
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-----CccccC-Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-----~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
....|++++++| ....+. .. .....+++.+.++.|+++.... ..|.+
T Consensus 50 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~------------~~I~~ 103 (316)
T 1ijq_A 50 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------GTVSV 103 (316)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred --------------CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCC------------CEEEE
Confidence 115788888854 222222 22 4556888888888898875443 47889
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
.+++++..+.+..... ..+++++.+|++.. |||+... ....|++++. +|...+.
T Consensus 104 ~~~~g~~~~~~~~~~~------------~~P~~iavdp~~g~-ly~~d~~----------~~~~I~~~~~---dG~~~~~ 157 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 157 (316)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCCEEE
T ss_pred EeCCCCceEEEEECCC------------CCcceEEeCCCCCE-EEEEccC----------CCCeEEEEcC---CCCCeEE
Confidence 9998876655543211 12568999998877 8888521 1247888887 5655555
Q ss_pred Eeec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 294 LHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 294 l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+... -.....++|+|+++.|+++. .....|+++++++.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D---~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 196 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred EEECCCCCceEEEEeccCCEEEEEE---CCCCeEEEEecCCC
Confidence 5432 23456789999999888864 23357999999873
No 449
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=1.1e-05 Score=84.91 Aligned_cols=180 Identities=12% Similarity=-0.035 Sum_probs=122.0
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+.++++++....+..... .+..++|++.++.|+++-.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~-----~~~~l~~d~~~~~lywsD~---------------------------------- 131 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL---------------------------------- 131 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCS-----CEEEEEEETTTTEEEEEET----------------------------------
T ss_pred cceeEEEccCCcceeEeccccC-----cceEEeeeeccCceEEEec----------------------------------
Confidence 3789999999887666643322 3457899999888988722
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-----CccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
....|++++++| ....+.. . .....+++.+.++.|+++.... ..|.+
T Consensus 132 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~------------~~I~~ 185 (400)
T 3p5b_L 132 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------GTVSV 185 (400)
T ss_dssp --------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred --------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC------------CeEEE
Confidence 115788888865 2233322 2 5566788888888898875543 47889
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
.+++++..+.+..... ..+++++++|.+.. |||+... ....|++++. +|...+.
T Consensus 186 ~~~~g~~~~~l~~~~~------------~~P~~iavdp~~g~-ly~td~~----------~~~~I~~~~~---dG~~~~~ 239 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 239 (400)
T ss_dssp ECTTTCSEEEEEECSS------------CCEEEEEEETTTTE-EEEEECS----------SSCCEEEEET---TSCSCEE
T ss_pred EeCCCCceEEEEeCCC------------CCcceEEEecccCe-EEEEeCC----------CCCEEEEEeC---CCCccEE
Confidence 9999887665543211 12568999998776 8888521 2247888888 6666666
Q ss_pred Eeecc-cceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 294 LHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 294 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+.... .....++++++++.|+++. .....|+++++++.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 278 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred EEECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEeCCCC
Confidence 65433 4567789999999888864 23457999999874
No 450
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.54 E-value=3.7e-06 Score=89.69 Aligned_cols=148 Identities=12% Similarity=0.079 Sum_probs=92.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccC-----cc-ee---ccCCCCccccccccceEEecC-CcEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-----EA-KP---LFESPDICLNAVFGSFVWVNN-STLL 101 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g-----~~-~~---lt~~~~~~~~~~~~~~~wspd-g~~l 101 (752)
.+...+|||||++||..... ......|.++++.++ +. +. +.....+ ...+..+.|+|+ ++.|
T Consensus 94 ~v~~l~~spdg~~lav~~~s------gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS------SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA--GGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE------TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG--GGSEEEEEECSSCTTEE
T ss_pred cccEEEEcCCCCEEEEEEec------cCCCceEEEEEccccccCCcCCcceeeeeeccCCC--CCceEEEEECCCCCCEE
Confidence 48889999999999863210 144578899998765 11 11 1111111 124678999998 6666
Q ss_pred EEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCc-cccCCc-ccee
Q 004456 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP-AVYT 178 (752)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~-~~l~~~-~~~~ 178 (752)
+..+.+ +.|.+||+ ++.. .....+ ..+.
T Consensus 166 as~s~D-------------------------------------------------g~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 166 AVCLAD-------------------------------------------------GSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEETT-------------------------------------------------SCEEEEEESSSEEEEEEECGGGCEE
T ss_pred EEEECC-------------------------------------------------CeEEEEEcCCCcceeeccCCCCcee
Confidence 654321 57888888 5522 222223 6788
Q ss_pred ccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCc
Q 004456 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (752)
Q Consensus 179 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~ 255 (752)
.++|||||++|+....++ .+.+||..+.....+........ .....+..+.|++++..
T Consensus 197 ~v~wspdg~~lasgs~dg-------------~v~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNG-------------TVVQYLPTLQEKKVIPCPPFYES------DHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEEECTTSSCEEEEETTS-------------CEEEECTTCCEEEEECCCTTCCT------TSCEEEEEEEEEETTEE
T ss_pred EEEEcCCCCEEEEEcCCC-------------cEEEEccCCcccccccCCcccCC------CCceeEEEEEEecCceE
Confidence 999999999999887553 79999998554444432221100 01123668999998875
No 451
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.54 E-value=1.8e-07 Score=94.93 Aligned_cols=88 Identities=13% Similarity=0.073 Sum_probs=63.3
Q ss_pred hhHHHHHhCCcE---EEecCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 004456 546 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 620 (752)
Q Consensus 546 ~~~~~l~~~G~~---v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 620 (752)
.++..|.++||. |++++ ..|+|.+... ........+++.+.++.+.+... .+++.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~~D---~~g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~g--~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFGVT---YLSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYTG--KSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEEEC---CSCHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHHT--CSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEe---CCCCCccCCccccCCHHHHHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHH
Confidence 467788899998 88844 4454433221 11223456677777777766532 36899999999999999999
Q ss_pred HhC--CCceeEEEEccCCCC
Q 004456 621 AHA--PHLFCCGIARSGSYN 638 (752)
Q Consensus 621 ~~~--p~~~~~~v~~~~~~~ 638 (752)
.++ |++++++|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 988 889999999987643
No 452
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.53 E-value=2.4e-07 Score=97.50 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=66.1
Q ss_pred HHH-hCCcEEEecCCCCCCCCCCCCCCch------------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHHH
Q 004456 550 IFL-ARRFAVLAGPSIPIIGEGDKLPNDR------------FVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFM 615 (752)
Q Consensus 550 ~l~-~~G~~v~~~~~~~~~g~g~~~~~~~------------~~~~~~~d~~~~~~~l~~~~-~~d~~~i~l~G~S~GG~~ 615 (752)
.++ +.|+.|++ .+.+|+|++.+... ...+.++|+.+.+++++... .....+++++||||||.+
T Consensus 63 ~lA~~~~~~Vi~---~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~l 139 (446)
T 3n2z_B 63 DVAEELKAMLVF---AEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGML 139 (446)
T ss_dssp HHHHHHTEEEEE---ECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHH
T ss_pred HHHHHhCCcEEE---EecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHH
Confidence 344 35889999 66778888854211 24678899999999998752 223468999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCC
Q 004456 616 TAHLLAHAPHLFCCGIARSGSY 637 (752)
Q Consensus 616 a~~~~~~~p~~~~~~v~~~~~~ 637 (752)
|+.++.++|+.+.++|+.++..
T Consensus 140 A~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 140 AAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHhhhccccEEEEeccch
Confidence 9999999999999999877553
No 453
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.52 E-value=2.1e-05 Score=78.54 Aligned_cols=201 Identities=12% Similarity=0.070 Sum_probs=115.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC-ccccccccceEEe-cCCcEEEEEecCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWV-NNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~-~~~~~~~~~~~ws-pdg~~l~~~~~~~~ 109 (752)
.....+++|||+.++. . .....|++++.++...+.+..... .........++++ ++|+ |+++...
T Consensus 31 ~p~~v~~~~~g~l~v~--~--------~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~-- 97 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVA--D--------TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS-- 97 (286)
T ss_dssp CEEEEEECTTCCEEEE--E--------GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG--
T ss_pred CCceEEECCCCCEEEE--E--------CCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC--
Confidence 4666889999973322 1 234679999987655554432110 0000123466775 5555 5544210
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCc-cccCCc--cceeccccCCCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA-KDFGTP--AVYTAVEPSPDQ 186 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~-~~l~~~--~~~~~~~~SpDG 186 (752)
....|++++.+|+. ..+... .....++++|||
T Consensus 98 ---------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g 132 (286)
T 1q7f_A 98 ---------------------------------------------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKG 132 (286)
T ss_dssp ---------------------------------------------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTS
T ss_pred ---------------------------------------------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCC
Confidence 01578888887743 333222 456789999999
Q ss_pred ceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCC
Q 004456 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (752)
Q Consensus 187 k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~ 266 (752)
+ |++..... ..|++++.+++....+..... ...+..++++|||+ ++++..
T Consensus 133 ~-l~v~~~~~------------~~i~~~~~~g~~~~~~~~~~~-----------~~~p~~i~~~~~g~--l~v~~~---- 182 (286)
T 1q7f_A 133 R-IIVVECKV------------MRVIIFDQNGNVLHKFGCSKH-----------LEFPNGVVVNDKQE--IFISDN---- 182 (286)
T ss_dssp C-EEEEETTT------------TEEEEECTTSCEEEEEECTTT-----------CSSEEEEEECSSSE--EEEEEG----
T ss_pred C-EEEEECCC------------CEEEEEcCCCCEEEEeCCCCc-----------cCCcEEEEECCCCC--EEEEEC----
Confidence 7 55553332 378999988776555432110 01256899999997 666542
Q ss_pred CCccccCccceEEeccCCCCCCCCCeEEeecc--cceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
....|++++. ++.....+.... .....++++|||+.++... .. ...|.+++.++
T Consensus 183 -------~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~-~~--~~~i~~~~~~g 238 (286)
T 1q7f_A 183 -------RAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGEILIADN-HN--NFNLTIFTQDG 238 (286)
T ss_dssp -------GGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC-SS--SCEEEEECTTS
T ss_pred -------CCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCCEEEEeC-CC--CEEEEEECCCC
Confidence 2347888887 444333333221 3456788999996443322 11 12688998765
No 454
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.50 E-value=2.9e-05 Score=77.76 Aligned_cols=75 Identities=8% Similarity=0.051 Sum_probs=43.3
Q ss_pred ccceeeee---CCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEeecc---cceeeeeeecCCceEEEe
Q 004456 244 MRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLD---LRFRSVSWCDDSLALVNE 316 (752)
Q Consensus 244 ~~~~~wsp---DG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~---~~~~~~~~spDg~~l~~~ 316 (752)
+..++||| ||+. |+-.+ ....|.+||+ ++++ .+.+.... ..+...+|||||+.++..
T Consensus 181 v~~l~fs~~~g~~~~-LaSgS------------~D~TIkIWDl---~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 181 ETILTFAEVQGMQEA-LLGTT------------IMNNIVIWNL---KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp SCEEEEEEEETSTTE-EEEEE------------TTSEEEEEET---TTCCEEEEEECCC---CCCEEEEEEETTEEEEEE
T ss_pred eeeEEeeccCCCCce-EEEec------------CCCcEEEEEC---CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEe
Confidence 45678888 5564 44333 4458899998 4444 44454322 234556899999988764
Q ss_pred eec--------ccCceeEEEEcCCCC
Q 004456 317 TWY--------KTSQTRTWLVCPGSK 334 (752)
Q Consensus 317 ~~~--------~~~~~~l~~~~~~~~ 334 (752)
+.. .+....|.++++.++
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp C------------CCEEEEEEETTTT
T ss_pred ccCCCcceeeccCCCcEEEEEECCCC
Confidence 421 123345666677663
No 455
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.49 E-value=2.6e-07 Score=97.52 Aligned_cols=109 Identities=10% Similarity=-0.064 Sum_probs=73.5
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHH-HhCCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHH
Q 004456 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEA 588 (752)
Q Consensus 512 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~ 588 (752)
..|+||++||.+.. ....+....+..| ...+|.|++ .+.+|+|.+.... .......+++.+
T Consensus 68 ~~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~---vD~~g~g~s~y~~~~~~~~~v~~~la~ 131 (449)
T 1hpl_A 68 GRKTRFIIHGFIDK-------------GEESWLSTMCQNMFKVESVNCIC---VDWKSGSRTAYSQASQNVRIVGAEVAY 131 (449)
T ss_dssp TSEEEEEECCCCCT-------------TCTTHHHHHHHHHHHHCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCCC-------------CCccHHHHHHHHHHhcCCeEEEE---EeCCcccCCccHHHHHHHHHHHHHHHH
Confidence 36999999995211 0001111123444 357899999 4555666553111 112334567778
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 589 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
.+++|.+...++.+++.|+||||||++|+.++.++|++++.++.+.|.
T Consensus 132 ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 132 LVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 888886543356689999999999999999999999999999988875
No 456
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.48 E-value=1.7e-05 Score=80.24 Aligned_cols=180 Identities=12% Similarity=0.068 Sum_probs=118.4
Q ss_pred cceEEEEEcccCc--ceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccch
Q 004456 61 KLRVWIADAETGE--AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (752)
Q Consensus 61 ~~~l~v~~~~~g~--~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (752)
...|..++++++. ...+..... ....+.|.+.++.|+++-.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~-----~~~~ld~d~~~~~lyw~D~-------------------------------- 54 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLE-----DAAAVDFVFSHGLIYWSDV-------------------------------- 54 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEE-----EEEEEEEEGGGTEEEEEET--------------------------------
T ss_pred cCeEEEEECCCCceEEEEEecCCC-----ccEEEEEEeCCCEEEEEEC--------------------------------
Confidence 4789999998864 222211100 2346789998888988721
Q ss_pred hhccCChhhhhhhhhhcccEEEEEccCCCc--ccc-CCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEE
Q 004456 139 DNLLKDEYDESLFDYYTTAQLVLGSLDGTA--KDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (752)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~--~~l-~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (752)
....|++++++|.. ..+ ... .....+++.+.+..|+++.... ..|.+.
T Consensus 55 ----------------~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~------------~~I~~~ 106 (318)
T 3sov_A 55 ----------------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSET------------NRIEVS 106 (318)
T ss_dssp ----------------TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTT------------TEEEEE
T ss_pred ----------------CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCC------------CEEEEE
Confidence 11579999996632 222 222 4566788888888998875443 478899
Q ss_pred ecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE
Q 004456 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (752)
Q Consensus 215 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (752)
++++...+.+..... ..++++++.|.+.. |||+... ....|++++. +|...+.+
T Consensus 107 ~~dG~~~~~l~~~~~------------~~P~giavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~ 160 (318)
T 3sov_A 107 NLDGSLRKVLFWQEL------------DQPRAIALDPSSGF-MYWTDWG----------EVPKIERAGM---DGSSRFII 160 (318)
T ss_dssp ETTSCSCEEEECSSC------------SSEEEEEEEGGGTE-EEEEECS----------SSCEEEEEET---TSCSCEEE
T ss_pred ECCCCcEEEEEeCCC------------CCccEEEEeCCCCE-EEEEecC----------CCCEEEEEEc---CCCCeEEE
Confidence 999876655542211 12568999998776 8888421 2347899888 56555555
Q ss_pred eec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 295 HKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 295 ~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
... -.....++|+|+++.|+++. .....|+++++++.
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD---~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNLDGT 198 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred EECCCCCccEEEEeccCCEEEEEE---CCCCEEEEEcCCCC
Confidence 432 23456789999999888864 23457999999873
No 457
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.48 E-value=1.9e-05 Score=83.38 Aligned_cols=229 Identities=8% Similarity=-0.060 Sum_probs=122.8
Q ss_pred eeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcc-eeccCCCCcc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDIC 84 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~-~~lt~~~~~~ 84 (752)
.|..+++.+ ++.+.+... ..... ++|+|||+.|+.+.. .....||+++.+++.. +.+.......
T Consensus 153 ~I~~id~~~----g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~--------~~~~~I~~~d~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 153 RVRLISVDD----NKVTTVHPG--FKGGK-PAVTKDKQRVYSIGW--------EGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp EEEEEETTT----TEEEEEEET--CCBCB-CEECTTSSEEEEEBS--------STTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred cEEEEECCC----CEEEEeecc--CCCCc-eeEecCCCcEEEEec--------CCCceEEEEEcCCCceeEEeeeccchh
Confidence 455556555 665555422 22234 999999998876532 2223899999887654 2331000000
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc
Q 004456 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (752)
Q Consensus 85 ~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~ 164 (752)
......++++|++..|++... ...|+++++
T Consensus 218 -~~~p~~iav~p~~g~lyv~d~-------------------------------------------------~~~I~~~d~ 247 (409)
T 3hrp_A 218 -SGKIGAVALDETEEWLYFVDS-------------------------------------------------NKNFGRFNV 247 (409)
T ss_dssp -CSCCCBCEECTTSSEEEEECT-------------------------------------------------TCEEEEEET
T ss_pred -cCCcEEEEEeCCCCeEEEEEC-------------------------------------------------CCcEEEEEC
Confidence 012457799996666777411 147888888
Q ss_pred CC-Ccccc----CCc--cce-e-ccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCC-
Q 004456 165 DG-TAKDF----GTP--AVY-T-AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP- 234 (752)
Q Consensus 165 ~G-~~~~l----~~~--~~~-~-~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~- 234 (752)
++ ....+ ... ... . .++|+|++..|++..... ..|++++.++.. ..+..........
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~------------~~I~~~~~~g~~-~~~~g~~~~~g~~d 314 (409)
T 3hrp_A 248 KTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL------------SSVYKITPDGEC-EWFCGSATQKTVQD 314 (409)
T ss_dssp TTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT------------TEEEEECTTCCE-EEEEECTTCCSCBC
T ss_pred CCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC------------CEEEEEecCCCE-EEEEeCCCCCCcCC
Confidence 44 43333 221 222 2 899999888888875443 478999988763 3322211000000
Q ss_pred cc-cCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec---------------c
Q 004456 235 VC-YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---------------D 298 (752)
Q Consensus 235 ~~-~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~---------------~ 298 (752)
.. ....-..+..++++|||+ ||++.. .....|.+++. ..+....+... -
T Consensus 315 g~~~~~~~~~P~gia~d~dG~--lyvad~----------~~~~~I~~~~~---~~G~v~~~~g~~~~~g~~~g~~~~~~~ 379 (409)
T 3hrp_A 315 GLREEALFAQPNGMTVDEDGN--FYIVDG----------FKGYCLRKLDI---LDGYVSTVAGQVDVASQIDGTPLEATF 379 (409)
T ss_dssp EEGGGCBCSSEEEEEECTTCC--EEEEET----------TTTCEEEEEET---TTTEEEEEEECTTCBSCCCBSTTTCCB
T ss_pred CcccccEeCCCeEEEEeCCCC--EEEEeC----------CCCCEEEEEEC---CCCEEEEEeCCCCCCCcCCCChhceEe
Confidence 00 000012356799999998 777742 02336777775 23344433322 1
Q ss_pred cceeeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 299 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 299 ~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
.....+++++||. |+++. . .+.+|.++.+
T Consensus 380 ~~P~giavd~~g~-lyVad-~--~n~~Ir~i~~ 408 (409)
T 3hrp_A 380 NYPYDICYDGEGG-YWIAE-A--WGKAIRKYAV 408 (409)
T ss_dssp SSEEEEEECSSSE-EEEEE-S--TTCEEEEEEE
T ss_pred CCceEEEEcCCCC-EEEEE-C--CCCeEEEEEe
Confidence 1245567788854 33332 1 2335665543
No 458
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.46 E-value=2.1e-05 Score=84.02 Aligned_cols=207 Identities=15% Similarity=0.123 Sum_probs=120.8
Q ss_pred cceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc
Q 004456 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (752)
Q Consensus 4 ~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~ 83 (752)
...|.++++.. ++...... .....+....| ||+.|+..+ ..+.|.++++++++..........
T Consensus 152 dg~i~iwd~~~----~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h~~ 214 (435)
T 1p22_A 152 DNTIKIWDKNT----LECKRILT-GHTGSVLCLQY--DERVIITGS----------SDSTVRVWDVNTGEMLNTLIHHCE 214 (435)
T ss_dssp SSCEEEEESSS----CCEEEEEC-CCSSCEEEEEC--CSSEEEEEE----------TTSCEEEEESSSCCEEEEECCCCS
T ss_pred CCeEEEEeCCC----CeEEEEEc-CCCCcEEEEEE--CCCEEEEEc----------CCCeEEEEECCCCcEEEEEcCCCC
Confidence 34577777765 55443321 12224555555 888888753 346899999988875443322221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEc
Q 004456 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (752)
Q Consensus 84 ~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~ 163 (752)
.+..+.|++ +.|+..+. .+.|.+++
T Consensus 215 ----~v~~l~~~~--~~l~s~s~-------------------------------------------------dg~i~vwd 239 (435)
T 1p22_A 215 ----AVLHLRFNN--GMMVTCSK-------------------------------------------------DRSIAVWD 239 (435)
T ss_dssp ----CEEEEECCT--TEEEEEET-------------------------------------------------TSCEEEEE
T ss_pred ----cEEEEEEcC--CEEEEeeC-------------------------------------------------CCcEEEEe
Confidence 356677764 45555422 15788888
Q ss_pred c-CCCc----cccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEE-ecCCCCCCCCCcc
Q 004456 164 L-DGTA----KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVC 236 (752)
Q Consensus 164 ~-~G~~----~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~ 236 (752)
+ ++.. ..+..+ ..+..+.| ||+.|+..+.++ .+.+||+.+++... +....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg-------------~i~vwd~~~~~~~~~~~~~~-------- 296 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR-------------TIKVWNTSTCEFVRTLNGHK-------- 296 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS-------------EEEEEETTTCCEEEEEECCS--------
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC-------------eEEEEECCcCcEEEEEcCCC--------
Confidence 8 4432 223333 56667777 889888876653 79999998765433 22221
Q ss_pred cCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEe
Q 004456 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNE 316 (752)
Q Consensus 237 ~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~ 316 (752)
..+..+.| +++. ++... ..+.|.++|+. .+.....+......+..++| |++.|+.+
T Consensus 297 -----~~v~~~~~--~~~~-l~~g~------------~dg~i~iwd~~--~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 297 -----RGIACLQY--RDRL-VVSGS------------SDNTIRLWDIE--CGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp -----SCEEEEEE--ETTE-EEEEE------------TTSCEEEEETT--TCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred -----CcEEEEEe--CCCE-EEEEe------------CCCeEEEEECC--CCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 11334555 5664 44443 34478888883 23333344445556777777 78888777
Q ss_pred eecccCceeEEEEcCCC
Q 004456 317 TWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 317 ~~~~~~~~~l~~~~~~~ 333 (752)
+ ..+.|.++++.+
T Consensus 353 ~----~dg~i~vwd~~~ 365 (435)
T 1p22_A 353 A----YDGKIKVWDLVA 365 (435)
T ss_dssp E----TTSCEEEEEHHH
T ss_pred e----CCCcEEEEECCC
Confidence 6 223477777654
No 459
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.44 E-value=2.7e-07 Score=97.47 Aligned_cols=107 Identities=10% Similarity=-0.028 Sum_probs=71.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHh-CCcEEEecCCCCCCCCCCCCCCc--hhHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAA 589 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~ 589 (752)
.|+||++||.+.. ....+....+..|++ .+|.|+++| .+|.|.+.... .......+++.+.
T Consensus 70 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~vD---~~g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFIDK-------------GEENWLLDMCKNMFKVEEVNCICVD---WKKGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHTTTCCEEEEEEE---CHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCC-------------CCcchHHHHHHHHHhcCCeEEEEEe---CccccCCcchHHHHHHHHHHHHHHHH
Confidence 6999999995211 000111112334554 489999944 45554432111 1233456777788
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004456 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (752)
Q Consensus 590 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~~~~~~v~~~~~ 636 (752)
+++|.++..++.+++.|+||||||++|+.++.+.|+ ++.++.+.|.
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 888865433556899999999999999999999998 9999988775
No 460
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=4.4e-06 Score=94.39 Aligned_cols=180 Identities=12% Similarity=-0.045 Sum_probs=115.9
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+++++++++...+..... ....++|+++++.||++-.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~-----~p~gla~d~~~~~Ly~sD~---------------------------------- 425 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL---------------------------------- 425 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCT-----TCCCCEEETTTTEEEECCT----------------------------------
T ss_pred ccceEEEeCCCCcceeeeccCc-----ceEEEccccccCeEEEEec----------------------------------
Confidence 3578889988877666543322 2457799999888888621
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-----CccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
....|++++++| ....+.. . .....+++.+.++.||++.... ..|++
T Consensus 426 --------------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~------------~~I~v 479 (699)
T 1n7d_A 426 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------GTVSV 479 (699)
T ss_dssp --------------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTT------------SCEEE
T ss_pred --------------CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccC------------CeEEE
Confidence 114678888754 2222222 2 3456788888888888764332 47899
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
++++++..+.+..... ..++.++++|++.+ |||+... ....|+++++ ++...+.
T Consensus 480 ~d~dg~~~~~l~~~~~------------~~P~giavDp~~g~-ly~td~~----------~~~~I~~~~~---dG~~~~~ 533 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 533 (699)
T ss_dssp EBSSSCCEEEECCCSS------------CCCCCEECCSSSSC-CEECCCS----------SSCCEEBCCS---SSCCCCE
T ss_pred EecCCCceEEEEeCCC------------CCcceEEEccCCCc-EEEcccC----------CCCeEEEEeC---CCCCeeE
Confidence 9999887666543211 12567899998877 8887421 2247888887 5555555
Q ss_pred Eeec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 294 LHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 294 l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+... -.....++|+|+++.|+++. .....|+++++++.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 572 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECSSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEccCCC
Confidence 5432 23356789999999888865 23457999999873
No 461
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.41 E-value=4.5e-05 Score=84.76 Aligned_cols=182 Identities=10% Similarity=0.010 Sum_probs=124.8
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
..+|..+++++.....+...... . ....+.|++++..||++-.
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~--~-~~~~l~~d~~~~~lywtD~---------------------------------- 56 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGV--K-EASALDFDVTDNRIYWTDI---------------------------------- 56 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSC--S-CEEEEEEETTTTEEEEEET----------------------------------
T ss_pred CCcEEEEECCCCCcceEEEcCCC--C-ceEEEEEECCCCEEEEEEC----------------------------------
Confidence 37899999998664433211211 1 2457799999898988722
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-CccccCCc--cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
....|++++++| ..+.+... .....+++.+.++.|+++.... ..|++.+++
T Consensus 57 --------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~------------~~I~v~~~d 110 (628)
T 4a0p_A 57 --------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGT------------NRIEVSKLD 110 (628)
T ss_dssp --------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEEEETT
T ss_pred --------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCC------------CEEEEEecC
Confidence 115799999977 44444332 4566888888899998875443 478999999
Q ss_pred CceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec
Q 004456 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (752)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 297 (752)
++..+.+..... ..++++++.|.... |||+... ...+|+.++. +|...+.+...
T Consensus 111 G~~~~~l~~~~l------------~~P~~iavdp~~G~-lY~tD~g----------~~~~I~r~~~---dG~~~~~l~~~ 164 (628)
T 4a0p_A 111 GQHRQVLVWKDL------------DSPRALALDPAEGF-MYWTEWG----------GKPKIDRAAM---DGSERTTLVPN 164 (628)
T ss_dssp STTCEEEECSSC------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEEEECS
T ss_pred CCcEEEEEeCCC------------CCcccEEEccCCCe-EEEeCCC----------CCCEEEEEeC---CCCceEEEECC
Confidence 886665543211 12678999996665 8888521 2448899888 67777777655
Q ss_pred ccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 298 ~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
-.....++++++++.|+++. .....|+++++++.
T Consensus 165 ~~~P~GlalD~~~~~LY~aD---~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTD---LDTNLIESSNMLGL 198 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred CCCcceEEEccccCEEEEEE---CCCCEEEEEcCCCC
Confidence 55567789999999888864 23457999999874
No 462
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.41 E-value=5.1e-06 Score=93.85 Aligned_cols=227 Identities=8% Similarity=0.021 Sum_probs=136.5
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCc----eeEEecCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~ 230 (752)
..|+++++++ +...+... .....++|++++..|+++.... ..|+++++++. ....+...
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~------------~~I~~~~~~g~~~~~~~~~~i~~--- 450 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISR--- 450 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTT------------TSBEEEESCCCCC-CCCCCBCCS---
T ss_pred cceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCC------------CeEEEEecCCCCCCcceEEEEeC---
Confidence 5788888865 55555444 6777899999999998875443 47888888762 11111110
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-ccceeeeeeecC
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDD 309 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~spD 309 (752)
....+..+++++.+.. |||+.. ....|++++. ++...+.+... ......+++.|+
T Consensus 451 ---------~~~~P~glavD~~~g~-LY~tD~-----------~~~~I~v~d~---dg~~~~~l~~~~~~~P~giavDp~ 506 (699)
T 1n7d_A 451 ---------DIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADT---KGVKRKTLFREQGSKPRAIVVDPV 506 (699)
T ss_dssp ---------CC--CCCEECCCSSSB-CEECCT-----------TTSCEEEEBS---SSCCEEEECCCSSCCCCCEECCSS
T ss_pred ---------CCCCcceEEEEeeCCc-EEEEec-----------cCCeEEEEec---CCCceEEEEeCCCCCcceEEEccC
Confidence 0112456788877776 888731 2346888887 55555555433 234567889998
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 389 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~ 389 (752)
+..|+++.+. ....|+++++++. ..+.+....... ...++|+|+++.|+++.
T Consensus 507 ~g~ly~td~~--~~~~I~~~~~dG~--~~~~l~~~~l~~------PnGlavd~~~~~LY~aD------------------ 558 (699)
T 1n7d_A 507 HGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQW------PNGITLDLLSGRLYWVD------------------ 558 (699)
T ss_dssp SSCCEECCCS--SSCCEEBCCSSSC--CCCEESCSSCSS------CCCEEECTTTCCEEEEE------------------
T ss_pred CCcEEEcccC--CCCeEEEEeCCCC--CeeEEEeCCCCC------ccEEEEeccCCEEEEEe------------------
Confidence 8888876532 2257999998874 223332222211 11277999999998886
Q ss_pred CCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 390 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 390 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
.....|+++|+.+...+.+...... .....++..|++.|+++... ...|++++..+|+..+
T Consensus 559 --~~~~~I~~~d~dG~~~~~~~~~~~~-----------~~~P~glavd~~~lywtd~~---~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 559 --SKLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSDVN 619 (699)
T ss_dssp --TTTTEEEEECSSSSCCEEECCCSSS-----------CSSCCCCEEETTEEEEECST---TTCEEEEETTTEEEEE
T ss_pred --cCCCeEEEEccCCCceEEEEecCCc-----------CCCceEeEEECCEEEEEeCC---CCeEEEEEccCCCceE
Confidence 2234689999876554444332111 01112444567777777532 3468899877766443
No 463
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.41 E-value=3.1e-05 Score=88.00 Aligned_cols=180 Identities=12% Similarity=-0.035 Sum_probs=121.2
Q ss_pred cceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhh
Q 004456 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (752)
Q Consensus 61 ~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (752)
...|+.+++++++...+..... ....+.|.+.+..||++-.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~-----~~~gl~~d~~~~~lY~sD~---------------------------------- 443 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL---------------------------------- 443 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEET----------------------------------
T ss_pred ccceeEeeccCCcceeeecCCC-----ceEEEeecccCCeeEEeec----------------------------------
Confidence 3678888888777666643322 2457789998888888622
Q ss_pred ccCChhhhhhhhhhcccEEEEEccCC-----CccccCC-c-cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~i~~~~~~G-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
....|++++++| ....+.. . .....+++.+.|+.||++-... ..|++
T Consensus 444 --------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~------------~~I~v 497 (791)
T 3m0c_C 444 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------GTVSV 497 (791)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred --------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC------------CeEEE
Confidence 114788888865 2233332 2 5566888999999999986543 47999
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
.+++++..+.+..... ..+++++++|.+.+ |||+... ....|.++++ +|...+.
T Consensus 498 ~~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~-LYwtD~g----------~~~~I~~~~~---dG~~~~~ 551 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 551 (791)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCCEEE
T ss_pred EeCCCCeEEEEEeCCC------------CCcceEEEecCCCC-EEEecCC----------CCCeEEEEec---CCCceEE
Confidence 9999887766643221 12668999998777 9998521 2247888888 6666666
Q ss_pred Eeecc-cceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 294 LHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 294 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+.... .....+++.++++.|+++. .....|+++++++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 590 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred EEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEecCCC
Confidence 65433 3466788998888888864 23457999999874
No 464
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.39 E-value=2e-06 Score=92.16 Aligned_cols=222 Identities=9% Similarity=-0.008 Sum_probs=122.7
Q ss_pred ceeEEeecCCCCCCCCceeecCCCCCceeceeEe-c-CCCCeEEEeecc-c------cc-cccccCcceEEEEEcccCcc
Q 004456 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSW-S-PDGKRIAFSVRV-D------EE-DNVSSCKLRVWIADAETGEA 74 (752)
Q Consensus 5 ~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~-S-PDG~~ia~~~~~-~------~~-~~~~~~~~~l~v~~~~~g~~ 74 (752)
..|.+.++.. .+..+|..+|.+......++ + |||++|...... . +. ....++.+.+-++|.++.+.
T Consensus 112 ~rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v 187 (595)
T 1fwx_A 112 TRVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV 187 (595)
T ss_dssp TEEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE
T ss_pred CEEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeE
Confidence 4577778877 77666667887777788887 6 999999554320 0 00 01125567899999988663
Q ss_pred -eeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhh
Q 004456 75 -KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (752)
Q Consensus 75 -~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 153 (752)
.++.- .. ....+..||||++++.++...+....- ....... . +.. ..-........-.++....
T Consensus 188 ~~qI~V-gg-----~pd~~~~spdGk~~~vt~~~se~~~~i-~~~~~~~--~----d~v-~V~~~~~~~~~v~~Gk~~~- 252 (595)
T 1fwx_A 188 AWQVLV-SG-----NLDNCDADYEGKWAFSTSYNSEKGMTL-PEMTAAE--M----DHI-VVFNIAEIEKAIAAGDYQE- 252 (595)
T ss_dssp EEEEEE-SS-----CCCCEEECSSSSEEEEEESCTTCCSSH-HHHTCCS--E----EEE-EEEEHHHHHHHHHHTCSEE-
T ss_pred EEEEEe-CC-----CccceEECCCCCEEEEEecCcccCcch-hhccccc--c----ceE-EEeeccceeEeccCCCeeE-
Confidence 44421 11 134668999999999886543222100 0000000 0 000 0000000000011121111
Q ss_pred hcccEEEEEcc-C--CC--ccccCCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCcee-------
Q 004456 154 YTTAQLVLGSL-D--GT--AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV------- 221 (752)
Q Consensus 154 ~~~~~i~~~~~-~--G~--~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~------- 221 (752)
-+.+.++|. + ++ ...+..+.....+.+|||||++++..... ..+.++|.++.+.
T Consensus 253 --i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s------------~~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 253 --LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS------------PTVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp --ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS------------SBEEEEEGGGHHHHHHSCCC
T ss_pred --ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC------------CeEEEEECcccccccccccC
Confidence 134778887 4 42 22343346777999999999999986554 4788888875421
Q ss_pred ---EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccC
Q 004456 222 ---RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPA 283 (752)
Q Consensus 222 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 283 (752)
..+... ....+++.++|+||| + +|.+.+.+ +.+..|++
T Consensus 319 ~~~~v~~~v-----------~vG~gP~h~aF~~dG-~-aY~t~~ld-----------sqV~kwdi 359 (595)
T 1fwx_A 319 PRSAVVAEP-----------ELGLGPLHTAFDGRG-N-AYTSLFLD-----------SQVVKWNI 359 (595)
T ss_dssp GGGGEEECC-----------BCCSCEEEEEECTTS-E-EEEEETTT-----------TEEEEEEH
T ss_pred cccceEEEc-----------CCCCCcceEEECCCC-e-EEEEEecC-----------CcEEEEEh
Confidence 011111 122457899999999 6 77775432 35666666
No 465
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.39 E-value=6.9e-05 Score=73.91 Aligned_cols=193 Identities=11% Similarity=-0.041 Sum_probs=117.0
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.....+++|||+ |.++ . . ...|++++.+++..+.+..... . ....+.++|+|+ |+++..
T Consensus 68 ~p~~i~~~~~g~-l~v~-~--------~-~~~i~~~d~~~~~~~~~~~~~~---~-~p~~i~~~~~g~-l~v~~~----- 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVT-D--------F-NNRVVTLAAGSNNQTVLPFDGL---N-YPEGLAVDTQGA-VYVADR----- 126 (270)
T ss_dssp SCCCEEECTTCC-EEEE-E--------T-TTEEEEECTTCSCCEECCCCSC---S-SEEEEEECTTCC-EEEEEG-----
T ss_pred CcceeEECCCCC-EEEE-c--------C-CCEEEEEeCCCceEeeeecCCc---C-CCcceEECCCCC-EEEEEC-----
Confidence 467789999998 4332 1 2 4689999988877665532211 1 245778999998 554411
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCC-CccccCC-c-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~-~-~~~~~~~~SpDGk~ 188 (752)
....|++++... ....... . .....++++|||+
T Consensus 127 -------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~- 162 (270)
T 1rwi_B 127 -------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN- 162 (270)
T ss_dssp -------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-
T ss_pred -------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-
Confidence 114678887633 2222211 1 4567899999997
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
|++..... ..|.+++.++........... ..+..+++++||. |+++..
T Consensus 163 l~v~~~~~------------~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g~--l~v~~~------ 210 (270)
T 1rwi_B 163 VYVTDTDN------------NRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAGT--VYVTEH------ 210 (270)
T ss_dssp EEEEEGGG------------TEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTCC--EEEEET------
T ss_pred EEEEECCC------------CEEEEEecCCCceEeecccCC------------CCceEEEECCCCC--EEEEEC------
Confidence 66654332 378999988775544321110 1256789999994 777642
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEeec-ccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
..+.|++++. ++.....+... ......++++|||+ |+++.. ....|.++++..
T Consensus 211 -----~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~~v~~~~~~~ 264 (270)
T 1rwi_B 211 -----NTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADR---GNDRVVKLTSLE 264 (270)
T ss_dssp -----TTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCC-EEEEEG---GGTEEEEECCCG
T ss_pred -----CCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCC-EEEEEC---CCCEEEEEcCCC
Confidence 2346888887 44443333222 23567788999997 555432 234688888765
No 466
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.39 E-value=2.8e-07 Score=96.65 Aligned_cols=167 Identities=14% Similarity=0.156 Sum_probs=103.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCc---EEEecCCCCCCCCCCC-----C---CC------
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDK-----L---PN------ 575 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~~~~~g~g~~-----~---~~------ 575 (752)
.|.||++||.+... .. +..++..|+++|| .|+++ +..|+|.+ . .+
T Consensus 22 ~ppVVLlHG~g~s~-----------~~----w~~la~~La~~Gy~~~~Via~---DlpG~G~S~~~~~Dv~~~G~~~~~G 83 (484)
T 2zyr_A 22 FRPVVFVHGLAGSA-----------GQ----FESQGMRFAANGYPAEYVKTF---EYDTISWALVVETDMLFSGLGSEFG 83 (484)
T ss_dssp CCCEEEECCTTCCG-----------GG----GHHHHHHHHHTTCCGGGEEEE---CCCHHHHHHHTTTSTTTTTGGGHHH
T ss_pred CCEEEEECCCCCCH-----------HH----HHHHHHHHHHcCCCcceEEEE---ECCCCCccccccccccccccccccc
Confidence 57899999964211 11 2246778889999 68884 44455432 0 00
Q ss_pred --------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEE
Q 004456 576 --------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIA 632 (752)
Q Consensus 576 --------------------~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p---~~~~~~v~ 632 (752)
........+++.+.++.+.++.. .+++.|+||||||.+++.++.++| ++++++|+
T Consensus 84 ~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg--~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVl 161 (484)
T 2zyr_A 84 LNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESG--ADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLIL 161 (484)
T ss_dssp HHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEE
T ss_pred cccccccccccccccccccccCchhhhHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEE
Confidence 01223446677777777766532 368999999999999999999987 48999999
Q ss_pred ccCCCCCCCCccCccccccchhhhHHHHHhcChhhhcCCCCCCEEEEEeCCCCC--CCCCHHHHHHHHHHHHhCCCcEEE
Q 004456 633 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDK--VGLFPMQAERFFDALKGHGALSRL 710 (752)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~--v~~~~~~~~~~~~~l~~~~~~~~~ 710 (752)
+++..+.. . ....++|.+.|..|.. |+ .... .+. . ..+.
T Consensus 162 Iapp~~~d----------------------------~-p~g~~~L~ilG~~d~~p~V~--~pss-----~L~-~--ga~~ 202 (484)
T 2zyr_A 162 LDGVWGVD----------------------------A-PEGIPTLAVFGNPKALPALG--LPEE-----KVV-Y--NATN 202 (484)
T ss_dssp ESCCCSEE----------------------------C-CTTSCEEEEEECGGGSCCSS--CCSS-----CCE-E--TSEE
T ss_pred ECCccccc----------------------------c-CcCCHHHHHhCCCCcCCccc--ChhH-----hcC-C--CceE
Confidence 99864310 0 0135677777766531 11 0110 111 0 2356
Q ss_pred EEeCCCCccCCccccHHHHHHHHHHHHHHH
Q 004456 711 VLLPFEHHVYAARENVMHVIWETDRWLQKY 740 (752)
Q Consensus 711 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 740 (752)
+++++.+|.... . ..+.++.+.+||...
T Consensus 203 v~i~~a~H~~ll-~-dp~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 203 VYFNNMTHVQLC-T-SPETFAVMFEFINGY 230 (484)
T ss_dssp EEETTCCHHHHH-H-CHHHHHHHHHHHHSS
T ss_pred EEECCCCccccc-c-CHHHHHHHHHHhccc
Confidence 678999997542 2 235666788998753
No 467
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=8.4e-05 Score=84.41 Aligned_cols=224 Identities=8% Similarity=0.028 Sum_probs=137.8
Q ss_pred cEEEEEccCC-CccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCc----eeEEecCCCCC
Q 004456 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPA 230 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~ 230 (752)
..|..+++++ +...+... .....++|++.++.|+++.... ..|+.+++++. ....+....
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~------------~~I~~~~l~g~~~~~~~~~vi~~~-- 469 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD-- 469 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEEECSS--
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccc------------eeEEEEeccCCCCCcceeEEEecC--
Confidence 4688888855 55555444 6777899999888998886543 36888888763 222222111
Q ss_pred CCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec-ccceeeeeeecC
Q 004456 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDD 309 (752)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~spD 309 (752)
...+..+++.+.++. |||+.. ....|+++++ +|...+.|... ......+++.|.
T Consensus 470 ----------l~~P~GLAvD~~~~~-LY~tD~-----------~~~~I~v~~l---dG~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 470 ----------IQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp ----------CSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEETT
T ss_pred ----------CCCcceeeeeecCCc-EEEEec-----------CCCeEEEEeC---CCCeEEEEEeCCCCCcceEEEecC
Confidence 112557899999987 999852 3457889888 66666666543 334678899999
Q ss_pred CceEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 389 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~ 389 (752)
+..|+++.+.. ...|+++++++. ..+.+........ ..++.++++..|+++.
T Consensus 525 ~g~LYwtD~g~--~~~I~~~~~dG~--~~~~lv~~~l~~P------~GLavD~~~~~LYwaD------------------ 576 (791)
T 3m0c_C 525 HGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWP------NGITLDLLSGRLYWVD------------------ 576 (791)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSC--CEEEEECSSCSCE------EEEEEETTTTEEEEEE------------------
T ss_pred CCCEEEecCCC--CCeEEEEecCCC--ceEEEEeCCCCCc------eEEEEecCCCeEEEEe------------------
Confidence 88888875332 257999999874 3334433222110 0155677777888875
Q ss_pred CCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCC
Q 004456 390 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (752)
Q Consensus 390 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~ 463 (752)
.....|+++++.+...+.+...... + ...++++.+++.|+++... ...|++++..+|+
T Consensus 577 --~~~~~I~~~d~dG~~~~~v~~~~~~--l---------~~P~glav~~~~lYwtD~~---~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 577 --SKLHSISSIDVNGGNRKTILEDEKR--L---------AHPFSLAVFEDKVFWTDII---NEAIFSANRLTGS 634 (791)
T ss_dssp --TTTTEEEEEETTSCSCEEEEECTTT--T---------SSEEEEEEETTEEEEEETT---TTEEEEEETTTCC
T ss_pred --CCCCcEEEEecCCCceEEEecCCCc--c---------CCCCEEEEeCCEEEEEECC---CCEEEEEeCCCCc
Confidence 2234699999976666665543211 0 1112444456777776532 3468888866554
No 468
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.37 E-value=0.00078 Score=74.73 Aligned_cols=104 Identities=10% Similarity=0.026 Sum_probs=71.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.....++.+.++.|.++- .....|.+.+++|...+.|..... . ....++..|.+..|+++-..
T Consensus 85 ~P~GlAvD~~~~~ly~~d---------~~~~~I~v~~~dG~~~~~l~~~~l---~-~P~~Iavdp~~g~ly~tD~g---- 147 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTD---------SETNRIEVSNLDGSLRKVLFWQEL---D-QPRAIALDPSSGFMYWTDWG---- 147 (619)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCEEEECSSC---S-CCCCEEEETTTTEEEEEECS----
T ss_pred CcCeEEEEecCCEEEEEe---------CCCCEEEEEECCCCCEEEEEeCCC---C-CCceEEEecCCCeEEEeccC----
Confidence 466788999888887752 344789999998877665542211 1 24678899988889887321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCC-ccccC-Cc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG-TP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~-~~~l~-~~-~~~~~~~~SpDGk~ 188 (752)
....|++.+++|. .+.+. .. .....++++|++++
T Consensus 148 -------------------------------------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~ 184 (619)
T 3s94_A 148 -------------------------------------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQK 184 (619)
T ss_dssp -------------------------------------------SSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTE
T ss_pred -------------------------------------------CCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCE
Confidence 0157888888883 33333 23 56778899999999
Q ss_pred EEEEecc
Q 004456 189 VLITSMH 195 (752)
Q Consensus 189 l~~~~~~ 195 (752)
|++.-..
T Consensus 185 LY~aD~~ 191 (619)
T 3s94_A 185 LYWADAK 191 (619)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9887543
No 469
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.36 E-value=0.00068 Score=67.65 Aligned_cols=193 Identities=14% Similarity=0.059 Sum_probs=111.1
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
......++|||+..+- . .....|++++.+ ++.+.+..... ...+..+.++++|+ |+++..
T Consensus 21 ~p~~i~~d~~g~l~v~--~--------~~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~-l~v~~~----- 80 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFT--Q--------HKANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGD-IWFTEN----- 80 (300)
T ss_dssp CEEEEEECTTSCEEEE--E--------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC-EEEEET-----
T ss_pred CcceeeECCCCCEEEE--c--------CCCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCC-EEEEec-----
Confidence 5777889999973332 1 234688999877 66554322111 01345778889887 444321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCccccCC--c-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~~l~~--~-~~~~~~~~SpDGk~ 188 (752)
....|++++.+|+...+.. . .....+.++|+|+
T Consensus 81 -------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~- 116 (300)
T 2qc5_A 81 -------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGD- 116 (300)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTC-
T ss_pred -------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCC-
Confidence 1146888888775443322 2 4567888999997
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
|++..... ..++.++.+ ++...+.... . ...+..+.++++|+ |++...
T Consensus 117 l~v~~~~~------------~~i~~~~~~-g~~~~~~~~~-~----------~~~~~~i~~d~~g~--l~v~~~------ 164 (300)
T 2qc5_A 117 IWFTQLNG------------DRIGKLTAD-GTIYEYDLPN-K----------GSYPAFITLGSDNA--LWFTEN------ 164 (300)
T ss_dssp EEEEETTT------------TEEEEECTT-SCEEEEECSS-T----------TCCEEEEEECTTSS--EEEEET------
T ss_pred EEEEccCC------------CeEEEECCC-CCEEEccCCC-C----------CCCceeEEECCCCC--EEEEec------
Confidence 44443322 368888887 4333332110 0 11256788999998 666642
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
..+.|++++. ++ ....+. ........++++++|+ |+++.. ....|++++..+
T Consensus 165 -----~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~~g 218 (300)
T 2qc5_A 165 -----QNNSIGRITN---TG-KLEEYPLPTNAAAPVGITSGNDGA-LWFVEI---MGNKIGRITTTG 218 (300)
T ss_dssp -----TTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECTTC
T ss_pred -----CCCeEEEECC---CC-cEEEeeCCCCCCCcceEEECCCCC-EEEEcc---CCCEEEEEcCCC
Confidence 2346788876 33 333332 1223456778889885 444431 233699999843
No 470
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.33 E-value=0.00015 Score=71.80 Aligned_cols=181 Identities=12% Similarity=0.011 Sum_probs=108.5
Q ss_pred cCcceEEEEEcccCcc-eeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccc
Q 004456 59 SCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRM 137 (752)
Q Consensus 59 ~~~~~l~v~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (752)
.....|+++|.++|+. .++...... ......++|||+.|+ ...
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~----~~~~~~~~pdG~ilv-s~~------------------------------- 55 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAGEILF-SYS------------------------------- 55 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTC----CCCEEEECTTSCEEE-ECB-------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccC----CCcCeEECCCCCEEE-eCC-------------------------------
Confidence 4558899999867664 444322100 234668899999666 311
Q ss_pred hhhccCChhhhhhhhhhcccEEEEEccCC-CccccCCc--cceeccccCCCCceEEEEecccCccccccccCccccEEEE
Q 004456 138 TDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (752)
Q Consensus 138 ~~~~~~~~~d~~~~~~~~~~~i~~~~~~G-~~~~l~~~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (752)
..|+.+|.+| ...++..+ ....++.++|||+.|+...... ..++.+
T Consensus 56 -------------------~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~------------~~v~~v 104 (276)
T 3no2_A 56 -------------------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP------------STILEV 104 (276)
T ss_dssp -------------------SEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTT------------EEEEEE
T ss_pred -------------------CCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCC------------CEEEEE
Confidence 3577777766 33444332 3566888999999988765422 367788
Q ss_pred ecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE
Q 004456 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (752)
Q Consensus 215 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (752)
+.+++....+...... + .....++.++.++||+. | ++.. ..+.++.+|. +|.....+
T Consensus 105 d~~Gk~l~~~~~~~~~---~----~~~~~~~~v~~~~~G~~-l-v~~~-----------~~~~v~~~d~---~G~~~w~~ 161 (276)
T 3no2_A 105 NMKGEVLSKTEFETGI---E----RPHAQFRQINKNKKGNY-L-VPLF-----------ATSEVREIAP---NGQLLNSV 161 (276)
T ss_dssp CTTSCEEEEEEECCSC---S----SGGGSCSCCEECTTSCE-E-EEET-----------TTTEEEEECT---TSCEEEEE
T ss_pred eCCCCEEEEEeccCCC---C----cccccccCceECCCCCE-E-EEec-----------CCCEEEEECC---CCCEEEEE
Confidence 8887766554322110 0 00112445678999995 3 3321 3457888887 64333333
Q ss_pred eecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 295 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 295 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
.. ..........++|+.++... ...+|+.++.+++
T Consensus 162 ~~-~~~~~~~~~~~~g~~~v~~~----~~~~v~~~d~~tG 196 (276)
T 3no2_A 162 KL-SGTPFSSAFLDNGDCLVACG----DAHCFVQLNLESN 196 (276)
T ss_dssp EC-SSCCCEEEECTTSCEEEECB----TTSEEEEECTTTC
T ss_pred EC-CCCccceeEcCCCCEEEEeC----CCCeEEEEeCcCC
Confidence 32 23344566788998777654 2346999999864
No 471
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.28 E-value=4.9e-06 Score=72.06 Aligned_cols=64 Identities=16% Similarity=0.057 Sum_probs=45.0
Q ss_pred hCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004456 553 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (752)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~p~ 625 (752)
.++|.|++ .+.+|+|.+...........+|+.+.++.+ +.+++.++||||||.+++.++.++|.
T Consensus 40 ~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYL---LDLPGYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEE---ECCTTSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEE---ECCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 34599999 555677766443322445555555555443 33689999999999999999999885
No 472
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.27 E-value=0.00026 Score=72.71 Aligned_cols=207 Identities=10% Similarity=-0.012 Sum_probs=108.3
Q ss_pred CCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC--ccccccccceEEec
Q 004456 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVN 96 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~--~~~~~~~~~~~wsp 96 (752)
|+.+.+.... ......+++|||+.++-..+. ..+...||.++ +|+.+++..... ......+..+.++|
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~------~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~ 76 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGRLFLSLHQF------YQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDG 76 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSCEEEEECGG------GCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECS
T ss_pred ceeEEEEEcC--CCcceEEECCCCCEEEEeCCC------CCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcC
Confidence 5555565433 357789999999764432221 01125788887 555554432110 00011345778999
Q ss_pred CCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCC-
Q 004456 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT- 173 (752)
Q Consensus 97 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~- 173 (752)
+|+ |+++-.. . .......|+++|+ +|+ .+.+.-
T Consensus 77 ~g~-L~v~D~g-~------------------------------------------~~~~~~~i~~~d~~tg~~~~~~~~~ 112 (343)
T 2qe8_A 77 NGI-VWMLDNG-N------------------------------------------QSKSVPKLVAWDTLNNQLSRVIYLP 112 (343)
T ss_dssp SSE-EEEEECH-H------------------------------------------HHTSCCEEEEEETTTTEEEEEEECC
T ss_pred CCc-EEEEcCC-C------------------------------------------CcCCCCeEEEEECCCCeEEEEEECC
Confidence 987 5544110 0 0001257888998 565 333221
Q ss_pred -----c-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccce
Q 004456 174 -----P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (752)
Q Consensus 174 -----~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (752)
. .....++++|++..++++..... ....|+++|+.+++..++...... .. ....
T Consensus 113 ~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---------~~~~i~v~d~~~g~~~r~~~~~~~-~~----------~~~~ 172 (343)
T 2qe8_A 113 PPITLSNSFVNDLAVDLIHNFVYISDPAPD---------DKAALIRVDLQTGLAARVLQGYPG-IA----------PEDI 172 (343)
T ss_dssp TTTSCTTCCCCEEEEETTTTEEEEEECCSG---------GGCEEEEEETTTCCEEEECTTCTT-TS----------CCSC
T ss_pred hhhcccccccceEEEecCCCEEEEEcCccC---------CCCeEEEEECCCCCEEEEecCCCc-cc----------cccc
Confidence 1 23468889998878877643100 124789999987665554322100 00 0013
Q ss_pred eeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEE
Q 004456 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (752)
Q Consensus 248 ~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 327 (752)
.+++||+. +++. +. ++ ....+ ......++|||||+.|++.... ..+||
T Consensus 173 ~~~~~g~~-~~~~---------------------~~---~g-~~~~~---~~~~~gia~s~dg~~ly~~~~~---~~~l~ 220 (343)
T 2qe8_A 173 DLVIDGVP-VQIG---------------------QP---DG-TVIRP---HLGVNGIVLDAENEWLYLSPMH---STSMY 220 (343)
T ss_dssp CCEETTEE-CBEE---------------------CT---TS-CEECC---CCCEEEEEECTTSCEEEEEESS---CSEEE
T ss_pred ceeECCEE-EEec---------------------cC---CC-ceece---ecccceeEeccCCCEEEEEeCC---CCeEE
Confidence 56667763 2222 11 11 11100 1123468999999988886522 23799
Q ss_pred EEcC
Q 004456 328 LVCP 331 (752)
Q Consensus 328 ~~~~ 331 (752)
+++.
T Consensus 221 ~~~~ 224 (343)
T 2qe8_A 221 RIKS 224 (343)
T ss_dssp EEEH
T ss_pred EEEH
Confidence 9875
No 473
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.26 E-value=0.0002 Score=71.36 Aligned_cols=131 Identities=13% Similarity=0.171 Sum_probs=78.8
Q ss_pred cEEEEEccCCCc-cccC--Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC
Q 004456 157 AQLVLGSLDGTA-KDFG--TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (752)
Q Consensus 157 ~~i~~~~~~G~~-~~l~--~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (752)
..|++++.+|+. ..+. .. .....++++|||+ |++..... ..|++|+.+++....+.....
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~------------~~i~~~~~~g~~~~~~~~~g~--- 205 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRA------------HCVKVFNYEGQYLRQIGGEGI--- 205 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGG------------TEEEEEETTCCEEEEESCTTT---
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCC------------CEEEEEcCCCCEEEEEccCCc---
Confidence 478888887743 3332 12 4567899999998 55543332 479999988776555432210
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccc-eEEeccCCCCCCCCCeEEeeccc--ceeeeeeecC
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILHKLDL--RFRSVSWCDD 309 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~~spD 309 (752)
...+..++++|||+ |+++.. ..+ .|.+++. ++.....+..... ....++++||
T Consensus 206 --------~~~p~~i~~d~~G~--l~v~~~-----------~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 206 --------TNYPIGVGINSNGE--ILIADN-----------HNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp --------SCSEEEEEECTTCC--EEEEEC-----------SSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred --------cCCCcEEEECCCCC--EEEEeC-----------CCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCC
Confidence 01256789999996 666642 222 7888886 5544444443222 3567899999
Q ss_pred CceEEEeeecccCceeEEEEcCC
Q 004456 310 SLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
|+ |+++. .+ ..|.+++..
T Consensus 262 g~-l~vs~-~~---~~v~v~~~~ 279 (286)
T 1q7f_A 262 GS-VVLAS-KD---YRLYIYRYV 279 (286)
T ss_dssp TE-EEEEE-TT---TEEEEEECS
T ss_pred Cc-EEEEC-CC---CeEEEEEcc
Confidence 97 44443 22 346555543
No 474
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.25 E-value=1.7e-06 Score=86.55 Aligned_cols=94 Identities=15% Similarity=0.089 Sum_probs=56.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCccCCCCchhHHHHHhCCcEEEecCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004456 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (752)
Q Consensus 513 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~~~~ 592 (752)
.|.||++||.+... ..| ..++..|. +.|++++. .+. ..........+++.+.++.
T Consensus 24 ~~~l~~~hg~~~~~-----------~~~----~~~~~~L~---~~v~~~d~---~~~----~~~~~~~~~a~~~~~~i~~ 78 (283)
T 3tjm_A 24 ERPLFLVHPIEGST-----------TVF----HSLASRLS---IPTYGLQC---TRA----APLDSIHSLAAYYIDCIRQ 78 (283)
T ss_dssp SCCEEEECCTTCCS-----------GGG----HHHHHHCS---SCEEEECC---CTT----SCCSCHHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCCH-----------HHH----HHHHHhcC---ceEEEEec---CCC----CCCCCHHHHHHHHHHHHHH
Confidence 57789999964211 111 12333333 88888544 221 1122344555554444422
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcee---EEEEccCC
Q 004456 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFC---CGIARSGS 636 (752)
Q Consensus 593 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---p~~~~---~~v~~~~~ 636 (752)
+ . ...++.|+||||||.+|+.++.+. |+.+. ++|++++.
T Consensus 79 ~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 79 V---Q--PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp T---C--CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred h---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 2 1 126899999999999999999864 77788 88888764
No 475
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.20 E-value=0.00054 Score=76.05 Aligned_cols=223 Identities=10% Similarity=0.015 Sum_probs=142.0
Q ss_pred cEEEEEccCC-Ccccc---CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCC
Q 004456 157 AQLVLGSLDG-TAKDF---GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (752)
Q Consensus 157 ~~i~~~~~~G-~~~~l---~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (752)
..|..+++++ ....+ ........++|++++..|+++.... ..|+.+++++...+.+.....
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~------------~~I~r~~~~g~~~~~v~~~g~--- 79 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISL------------KTISRAFMNGSALEHVVEFGL--- 79 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEECSSC---
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCC------------CeEEEEECCCCCcEEEEeCCC---
Confidence 6899999965 33222 2225677899999999999986543 478899998876555433211
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEe-ecccceeeeeeecCCc
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSL 311 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~~~spDg~ 311 (752)
..+.++++++.++. |||+.. ..+.|.++++ +|+..+.+. ..-.....++..|...
T Consensus 80 ---------~~P~GlAvD~~~~~-LY~tD~-----------~~~~I~v~~~---dG~~~~~l~~~~l~~P~~iavdp~~G 135 (628)
T 4a0p_A 80 ---------DYPEGMAVDWLGKN-LYWADT-----------GTNRIEVSKL---DGQHRQVLVWKDLDSPRALALDPAEG 135 (628)
T ss_dssp ---------SCCCEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSTTCEEEECSSCCCEEEEEEETTTT
T ss_pred ---------CCcceEEEEeCCCE-EEEEEC-----------CCCEEEEEec---CCCcEEEEEeCCCCCcccEEEccCCC
Confidence 12557899988887 999852 3457888888 666666665 3334467788999777
Q ss_pred eEEEeeecccCceeEEEEcCCCCCccceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCC
Q 004456 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE 391 (752)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~ 391 (752)
.|+++.+. ...+|+++++++. ....+.+ .... ..-++.+++++.|+++.
T Consensus 136 ~lY~tD~g--~~~~I~r~~~dG~--~~~~l~~-~~~~------P~GlalD~~~~~LY~aD-------------------- 184 (628)
T 4a0p_A 136 FMYWTEWG--GKPKIDRAAMDGS--ERTTLVP-NVGR------ANGLTIDYAKRRLYWTD-------------------- 184 (628)
T ss_dssp EEEEEECS--SSCEEEEEETTSC--SCEEEEC-SCSS------EEEEEEETTTTEEEEEE--------------------
T ss_pred eEEEeCCC--CCCEEEEEeCCCC--ceEEEEC-CCCC------cceEEEccccCEEEEEE--------------------
Confidence 78887543 2458999999984 3344432 1111 01256788888888886
Q ss_pred CCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecccCCCEEEEEEecCCCCcEEEEEECCCCCeeE
Q 004456 392 GNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (752)
Q Consensus 392 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 466 (752)
.....|+.+|++++..+.+ ..... ...++.-+++.|+++... ...|+++|..+|+.++
T Consensus 185 ~~~~~I~~~d~dG~~~~v~-~~~l~-------------~P~glav~~~~ly~tD~~---~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 185 LDTNLIESSNMLGLNREVI-ADDLP-------------HPFGLTQYQDYIYWTDWS---RRSIERANKTSGQNRT 242 (628)
T ss_dssp TTTTEEEEEETTSCSCEEE-EECCS-------------CEEEEEEETTEEEEEETT---TTEEEEEETTTCCSCE
T ss_pred CCCCEEEEEcCCCCceEEe-eccCC-------------CceEEEEECCEEEEecCC---CCEEEEEECCCCCceE
Confidence 2234699999876555433 22111 112333456778777532 4579999977665443
No 476
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.19 E-value=0.00034 Score=70.47 Aligned_cols=247 Identities=13% Similarity=0.106 Sum_probs=126.3
Q ss_pred CCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCC
Q 004456 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (752)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg 98 (752)
...+.+..++.+.....++|+|||+ |.++ . .....|+.++.+++..+.+. ... ....++++|||
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~-lyv~-d--------~~~~~I~~~d~~g~~~~~~~-~~~-----~p~gia~~~dG 83 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGT-IFVT-N--------HEVGEIVSITPDGNQQIHAT-VEG-----KVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSC-EEEE-E--------TTTTEEEEECTTCCEEEEEE-CSS-----EEEEEEECTTS
T ss_pred CCceEeEeCCCCCCcceEEECCCCC-EEEE-e--------CCCCeEEEECCCCceEEEEe-CCC-----CceeEEEcCCC
Confidence 4455566566555677899999997 5443 2 23468999998775443332 222 24577899999
Q ss_pred cEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCCccccCCc---
Q 004456 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--- 174 (752)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~~~~l~~~--- 174 (752)
+ |+++.... ....|+.++. +|+.+.+...
T Consensus 84 ~-l~vad~~~----------------------------------------------~~~~v~~~d~~~g~~~~~~~~~~~ 116 (306)
T 2p4o_A 84 D-LVATGWNA----------------------------------------------DSIPVVSLVKSDGTVETLLTLPDA 116 (306)
T ss_dssp C-EEEEEECT----------------------------------------------TSCEEEEEECTTSCEEEEEECTTC
T ss_pred c-EEEEeccC----------------------------------------------CcceEEEEcCCCCeEEEEEeCCCc
Confidence 9 55442110 0035777776 6655443321
Q ss_pred cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEe-cCCCCCCCCCcccCCccccccceeeeeCC
Q 004456 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADK 253 (752)
Q Consensus 175 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG 253 (752)
.....++..+++ .+++..... ..||++|..++..+.. .........+ ...-..+..+ +|||
T Consensus 117 ~~~~g~~~~~~~-~~~v~d~~~------------g~i~~~d~~~~~~~v~~~~~~~~~~~~---~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 117 IFLNGITPLSDT-QYLTADSYR------------GAIWLIDVVQPSGSIWLEHPMLARSNS---ESVFPAANGL--KRFG 178 (306)
T ss_dssp SCEEEEEESSSS-EEEEEETTT------------TEEEEEETTTTEEEEEEECGGGSCSST---TCCSCSEEEE--EEET
T ss_pred cccCcccccCCC-cEEEEECCC------------CeEEEEeCCCCcEeEEEECCccccccc---cCCCCcCCCc--CcCC
Confidence 122233334444 444443221 4788898876532211 1100000000 0000112334 9999
Q ss_pred CceEEEEEeccCCCCccccCccceEEeccCCCCCCC--CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
+. ||++.. ....|++++.+. ++. ..+.+... .....+++++||+ |+++. . ....|.+++.
T Consensus 179 ~~-lyv~d~-----------~~~~I~~~~~~~-~g~~~~~~~~~~~-~~P~gi~vd~dG~-l~va~-~--~~~~V~~~~~ 240 (306)
T 2p4o_A 179 NF-LYVSNT-----------EKMLLLRIPVDS-TDKPGEPEIFVEQ-TNIDDFAFDVEGN-LYGAT-H--IYNSVVRIAP 240 (306)
T ss_dssp TE-EEEEET-----------TTTEEEEEEBCT-TSCBCCCEEEEES-CCCSSEEEBTTCC-EEEEC-B--TTCCEEEECT
T ss_pred CE-EEEEeC-----------CCCEEEEEEeCC-CCCCCccEEEecc-CCCCCeEECCCCC-EEEEe-C--CCCeEEEECC
Confidence 87 777752 344788888731 111 12223222 3445678899996 43332 2 2346999997
Q ss_pred CCCCccceeccccccccccCCCCCC-ceeeC---CCCCeEEEeee
Q 004456 332 GSKDVAPRVLFDRVFENVYSDPGSP-MMTRT---STGTNVIAKIK 372 (752)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~~~p-~~~~s---~dg~~l~~~~~ 372 (752)
++. ...+....... ..| .++++ +|+++|+++..
T Consensus 241 ~G~---~~~~~~~~~~~-----~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 241 DRS---TTIIAQAEQGV-----IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TCC---EEEEECGGGTC-----TTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCC---EEEEeeccccc-----CCceEEEEecccCCCCEEEEECC
Confidence 642 22121111100 111 15567 88888888763
No 477
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.15 E-value=0.00011 Score=71.17 Aligned_cols=198 Identities=8% Similarity=-0.054 Sum_probs=116.9
Q ss_pred eceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 004456 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (752)
Q Consensus 33 ~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~ 112 (752)
.....|+||| .+|+++. ..+...|.++|+++++..+-...+.. ......+++|+.|+.+..
T Consensus 23 ~~Gl~~~~dg--~Lyvstg------~~~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~g~~lyv~t~------ 83 (266)
T 2iwa_A 23 TQGLVYAEND--TLFESTG------LYGRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLLNEKLYQVVW------ 83 (266)
T ss_dssp EEEEEECSTT--EEEEEEC------STTTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEET------
T ss_pred cccEEEeCCC--eEEEECC------CCCCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEeCCEEEEEEe------
Confidence 4678999996 4565431 13458999999999986554322221 122234555777877643
Q ss_pred CCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCccceeccccCCCCceEE
Q 004456 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVL 190 (752)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~~~~~~~~~SpDGk~l~ 190 (752)
....++++|. +++ ..++... ......+++||++|+
T Consensus 84 ------------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~ 120 (266)
T 2iwa_A 84 ------------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILY 120 (266)
T ss_dssp ------------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEE
T ss_pred ------------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEE
Confidence 1268999998 563 3344322 123455888999998
Q ss_pred EEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCc
Q 004456 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (752)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~ 269 (752)
++. .. +.++++|..+.+.. .+..... ..|. ..+.++.|. ||+ ||...
T Consensus 121 vs~-gs------------~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg~--lyvn~-------- 168 (266)
T 2iwa_A 121 GSD-GT------------SILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NGE--VWANI-------- 168 (266)
T ss_dssp EEC-SS------------SEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TTE--EEEEE--------
T ss_pred EEC-CC------------CeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CCE--EEEec--------
Confidence 764 32 47899998876443 3322110 0010 013467777 764 55442
Q ss_pred cccCccceEEeccCCCCCCCCCeE-Eeecc-------------cceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 270 VEVSPRDIIYTQPAEPAEGEKPEI-LHKLD-------------LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~-l~~~~-------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
...+.|.++|. ++++... +.... .....++|+||++.++.+.. .+.+|+.+++..
T Consensus 169 ---~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk---~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 ---WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK---LWPKLFEIKLHL 237 (266)
T ss_dssp ---TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET---TCSEEEEEEEEE
T ss_pred ---CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC---CCCeEEEEEEec
Confidence 23458999998 4555433 33211 13367899999998777642 334688888765
No 478
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.15 E-value=0.00039 Score=77.18 Aligned_cols=181 Identities=12% Similarity=0.064 Sum_probs=117.7
Q ss_pred CcceEEEEEcccCc--ceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccc
Q 004456 60 CKLRVWIADAETGE--AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRM 137 (752)
Q Consensus 60 ~~~~l~v~~~~~g~--~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (752)
...+|.++++++.. ...+...-. ....+.|+++++.|+++-.
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~-----~~~~ld~~~~~~~ly~sD~------------------------------- 59 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLE-----DAAAVDFVFSHGLIYWSDV------------------------------- 59 (619)
T ss_dssp CSSBEEEECCC---------CBCCS-----CEEEEEEETTTTEEEEEET-------------------------------
T ss_pred ccccEEEEeCCCCcceEEEEEcCCC-----ceEEEEEEeCCCEEEEEEC-------------------------------
Confidence 34789999998763 222221111 2457789999888988721
Q ss_pred hhhccCChhhhhhhhhhcccEEEEEccCCC--ccc-cCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEE
Q 004456 138 TDNLLKDEYDESLFDYYTTAQLVLGSLDGT--AKD-FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (752)
Q Consensus 138 ~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~--~~~-l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~ 213 (752)
....|++++++|. ... +... .....+++.+.++.|+++.... ..|.+
T Consensus 60 -----------------~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~------------~~I~v 110 (619)
T 3s94_A 60 -----------------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSET------------NRIEV 110 (619)
T ss_dssp -----------------TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred -----------------CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCC------------CEEEE
Confidence 1157889998773 222 3333 5677899999999999985543 47999
Q ss_pred EecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeE
Q 004456 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (752)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (752)
.+++++..+.+..... ..++++++.|.+.. |||+... ....|+..+. +|...+.
T Consensus 111 ~~~dG~~~~~l~~~~l------------~~P~~Iavdp~~g~-ly~tD~g----------~~~~I~r~~~---dG~~~~~ 164 (619)
T 3s94_A 111 SNLDGSLRKVLFWQEL------------DQPRAIALDPSSGF-MYWTDWG----------EVPKIERAGM---DGSSRFI 164 (619)
T ss_dssp EETTSCSCEEEECSSC------------SCCCCEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEE
T ss_pred EECCCCCEEEEEeCCC------------CCCceEEEecCCCe-EEEeccC----------CCCEEEEEEC---CCCceEE
Confidence 9999887665543211 22678999998776 8998521 1347888887 6666666
Q ss_pred Eee-cccceeeeeeecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 294 LHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 294 l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+.. .-.....++++++++.|+++. .....|+++++++.
T Consensus 165 l~~~~~~~P~Glald~~~~~LY~aD---~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 165 IINSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNLDGT 203 (619)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEE---TTTCCEEEESSSCC
T ss_pred EEeCCCCCCcEEEEEccCCEEEEEe---CCCCeEEEecCCCC
Confidence 653 333456788999988888864 23457999999874
No 479
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.11 E-value=0.00023 Score=69.07 Aligned_cols=166 Identities=6% Similarity=-0.004 Sum_probs=92.6
Q ss_pred cEEEEEcc-CCCcccc-CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCC
Q 004456 157 AQLVLGSL-DGTAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDI 233 (752)
Q Consensus 157 ~~i~~~~~-~G~~~~l-~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~ 233 (752)
+.|..+|+ +|+..+- .-........++++|++|+...... +.++++|.++.+.. .+... .
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~------------~~v~viD~~t~~v~~~i~~g--~--- 106 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK------------NIGFIYDRRTLSNIKNFTHQ--M--- 106 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC------------SEEEEEETTTTEEEEEEECC--S---
T ss_pred CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC------------CEEEEEECCCCcEEEEEECC--C---
Confidence 68999999 7754432 2222223334555688888886553 48999999876543 33222 1
Q ss_pred CcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCC-CeEEeeccc-----ceeeeeee
Q 004456 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDL-----RFRSVSWC 307 (752)
Q Consensus 234 ~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~-----~~~~~~~s 307 (752)
...+..++||++ ||.+. ..+.|+++|. ++.+ ...+.-... ....+.|.
T Consensus 107 ----------~~g~glt~Dg~~-l~vs~------------gs~~l~viD~---~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 107 ----------KDGWGLATDGKI-LYGSD------------GTSILYEIDP---HTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp ----------SSCCEEEECSSS-EEEEC------------SSSEEEEECT---TTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred ----------CCeEEEEECCCE-EEEEC------------CCCeEEEEEC---CCCcEEEEEEECCCCcccccceeEEEE
Confidence 124578899998 76552 2348999998 3333 333432211 24466777
Q ss_pred cCCceEEEeeecccCceeEEEEcCCCCCccceec-cccccc----c-ccCCCCCCceeeCCCCCeEEEee
Q 004456 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL-FDRVFE----N-VYSDPGSPMMTRTSTGTNVIAKI 371 (752)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l-~~~~~~----~-~~~~~~~p~~~~s~dg~~l~~~~ 371 (752)
|| .++. .... ...|.++|++++... ..+ ...... . ........-++++|+++.++++.
T Consensus 161 -dg-~lyv-n~~~--~~~V~vID~~tg~V~-~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 161 -NG-EVWA-NIWQ--TDCIARISAKDGTLL-GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp -TT-EEEE-EETT--SSEEEEEETTTCCEE-EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred -CC-EEEE-ecCC--CCeEEEEECCCCcEE-EEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 66 3443 3222 347999999986321 222 111000 0 00000111267899999888876
No 480
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.10 E-value=0.00085 Score=66.90 Aligned_cols=193 Identities=15% Similarity=0.107 Sum_probs=109.7
Q ss_pred ceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 31 ~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
.......++|||+..+. . .....|++++.+ ++.+.+..... ...+..+.++|||+ |+++..
T Consensus 57 ~~~~~i~~~~~g~l~v~-~---------~~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g~-l~v~~~---- 117 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFT-E---------NAANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNGD-IWFTEM---- 117 (299)
T ss_dssp CCEEEEEECTTSCEEEE-E---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC-EEEEET----
T ss_pred CceeeEEECCCCCEEEe-C---------CCCCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCCC-EEEEec----
Confidence 35677888999874333 1 224578888876 44443321111 01245678888887 444321
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCccccC--Cc-cceeccccCCCCc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFG--TP-AVYTAVEPSPDQK 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~~l~--~~-~~~~~~~~SpDGk 187 (752)
....|++++.+|+...+. .. .....+.++|||+
T Consensus 118 --------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 118 --------------------------------------------NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNA 153 (299)
T ss_dssp --------------------------------------------TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC
T ss_pred --------------------------------------------CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC
Confidence 114788888876544332 12 5567889999995
Q ss_pred eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
|++..... ..+++++. +++...+..... ...+..+.++++|+ |++...
T Consensus 154 -l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~-----------~~~~~~i~~~~~g~--l~v~~~----- 201 (299)
T 2z2n_A 154 -LWFTENQN------------NAIGRITE-SGDITEFKIPTP-----------ASGPVGITKGNDDA--LWFVEI----- 201 (299)
T ss_dssp -EEEEETTT------------TEEEEECT-TCCEEEEECSST-----------TCCEEEEEECTTSS--EEEEET-----
T ss_pred -EEEEeCCC------------CEEEEEcC-CCcEEEeeCCCC-----------CCcceeEEECCCCC--EEEEcc-----
Confidence 55543322 36888988 444443311110 11255789999987 666531
Q ss_pred CccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCC
Q 004456 268 ANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
..+.|++++. ++ ....+. ........++++++|+ |+++.. ....|++++.+
T Consensus 202 ------~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~d~~ 254 (299)
T 2z2n_A 202 ------IGNKIGRITT---SG-EITEFKIPTPNARPHAITAGAGID-LWFTEW---GANKIGRLTSN 254 (299)
T ss_dssp ------TTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEEETT
T ss_pred ------CCceEEEECC---CC-cEEEEECCCCCCCceeEEECCCCC-EEEecc---CCceEEEECCC
Confidence 2346788776 33 333332 1224567788999987 444431 23458899884
No 481
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.08 E-value=0.0019 Score=64.37 Aligned_cols=193 Identities=14% Similarity=0.073 Sum_probs=111.3
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
......++|||+.. ++. .....|++++.+ ++.+.+...... ..+..+..+++|+ |+++..
T Consensus 63 ~~~~i~~~~~g~l~-v~~---------~~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~-l~v~~~----- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGDIW-FTE---------NGANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGD-IWFTQL----- 122 (300)
T ss_dssp CEEEEEECTTSCEE-EEE---------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTC-EEEEET-----
T ss_pred cceeEEECCCCCEE-EEe---------cCCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCC-EEEEcc-----
Confidence 46677888888633 321 234678888877 555443221111 1245677888887 444321
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCcccc--CCc-cceeccccCCCCce
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDF--GTP-AVYTAVEPSPDQKY 188 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~~l--~~~-~~~~~~~~SpDGk~ 188 (752)
....|+.++.+|+...+ ... .....+.++|||+
T Consensus 123 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~- 158 (300)
T 2qc5_A 123 -------------------------------------------NGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA- 158 (300)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-
T ss_pred -------------------------------------------CCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-
Confidence 11468888887754433 212 5667889999998
Q ss_pred EEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCC
Q 004456 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (752)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~ 268 (752)
|++..... ..|++++.++. ...+... .. ...+..+.++++|+ |+++..
T Consensus 159 l~v~~~~~------------~~i~~~~~~g~-~~~~~~~-~~----------~~~~~~i~~d~~g~--l~v~~~------ 206 (300)
T 2qc5_A 159 LWFTENQN------------NSIGRITNTGK-LEEYPLP-TN----------AAAPVGITSGNDGA--LWFVEI------ 206 (300)
T ss_dssp EEEEETTT------------TEEEEECTTCC-EEEEECS-ST----------TCCEEEEEECTTSS--EEEEET------
T ss_pred EEEEecCC------------CeEEEECCCCc-EEEeeCC-CC----------CCCcceEEECCCCC--EEEEcc------
Confidence 66654332 36888888544 3333211 00 11256788999986 776642
Q ss_pred ccccCccceEEeccCCCCCCCCCeEEe--ecccceeeeeeecCCceEEEeeecccCceeEEEEcCCC
Q 004456 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (752)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 333 (752)
..+.|++++. ++ ...... ........++++++|+ |+++.. ....|++++.++
T Consensus 207 -----~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~~g 260 (300)
T 2qc5_A 207 -----MGNKIGRITT---TG-EISEYDIPTPNARPHAITAGKNSE-IWFTEW---GANQIGRITNDN 260 (300)
T ss_dssp -----TTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEECTTS
T ss_pred -----CCCEEEEEcC---CC-cEEEEECCCCCCCceEEEECCCCC-EEEecc---CCCeEEEECCCC
Confidence 2336788876 33 333322 2234466788999987 544431 234699999843
No 482
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.08 E-value=0.00054 Score=67.71 Aligned_cols=203 Identities=9% Similarity=-0.000 Sum_probs=113.8
Q ss_pred CcceeEEeecCCCCCCCCceeecCCCCCceeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCC
Q 004456 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (752)
Q Consensus 3 ~~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~ 82 (752)
....|++++... |+..--.............++|||+.|+. . ...|+.++.++....++.....
T Consensus 13 ~~~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-----------~~~V~~~d~~G~~~W~~~~~~~ 76 (276)
T 3no2_A 13 GWNKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILFS-Y-----------SKGAKMITRDGRELWNIAAPAG 76 (276)
T ss_dssp TCSEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEEE-C-----------BSEEEEECTTSCEEEEEECCTT
T ss_pred CCCEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEEe-C-----------CCCEEEECCCCCEEEEEcCCCC
Confidence 356777888744 55432221222125778899999987762 1 2468888885555555543211
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEE
Q 004456 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (752)
Q Consensus 83 ~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~ 162 (752)
. .+..+.++|||+.|+..... ...|+.+
T Consensus 77 ~----~~~~~~~~~dG~~lv~~~~~------------------------------------------------~~~v~~v 104 (276)
T 3no2_A 77 C----EMQTARILPDGNALVAWCGH------------------------------------------------PSTILEV 104 (276)
T ss_dssp C----EEEEEEECTTSCEEEEEEST------------------------------------------------TEEEEEE
T ss_pred c----cccccEECCCCCEEEEecCC------------------------------------------------CCEEEEE
Confidence 1 24466889999987754210 1355555
Q ss_pred ccCCCc-cccC------Cc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCC
Q 004456 163 SLDGTA-KDFG------TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (752)
Q Consensus 163 ~~~G~~-~~l~------~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (752)
+.+|+. .++. .. .....+.+++||+.|+..... ..+..+|.+++....+... ..
T Consensus 105 d~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-------------~~v~~~d~~G~~~w~~~~~-~~---- 166 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-------------SEVREIAPNGQLLNSVKLS-GT---- 166 (276)
T ss_dssp CTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-------------TEEEEECTTSCEEEEEECS-SC----
T ss_pred eCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-------------CEEEEECCCCCEEEEEECC-CC----
Confidence 555532 1111 01 234456789999988655333 3789999986655444332 11
Q ss_pred cccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCC-CCCCeEEeecc------cceeeeeee
Q 004456 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHKLD------LRFRSVSWC 307 (752)
Q Consensus 235 ~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~------~~~~~~~~s 307 (752)
+......++|+ ++++.. ...+|+.+|. + +.....+.... .....++..
T Consensus 167 ---------~~~~~~~~~g~--~~v~~~-----------~~~~v~~~d~---~tG~~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 167 ---------PFSSAFLDNGD--CLVACG-----------DAHCFVQLNL---ESNRIVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp ---------CCEEEECTTSC--EEEECB-----------TTSEEEEECT---TTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred ---------ccceeEcCCCC--EEEEeC-----------CCCeEEEEeC---cCCcEEEEecCCCCCCccccccccceEc
Confidence 33567788888 444421 2346888887 4 43334443221 113445566
Q ss_pred cCCceEEEe
Q 004456 308 DDSLALVNE 316 (752)
Q Consensus 308 pDg~~l~~~ 316 (752)
++|..++..
T Consensus 222 ~~G~i~v~~ 230 (276)
T 3no2_A 222 QNGGLYICN 230 (276)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEe
Confidence 778765554
No 483
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.04 E-value=0.00096 Score=67.13 Aligned_cols=209 Identities=11% Similarity=0.040 Sum_probs=104.8
Q ss_pred cEEEEEccCCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCc
Q 004456 157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (752)
Q Consensus 157 ~~i~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (752)
..|++++.+|+...+... .....++++|||+ |++...... ...++.++..+++.+.+...+.. ..
T Consensus 53 ~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~-l~vad~~~~----------~~~v~~~d~~~g~~~~~~~~~~~-~~-- 118 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWNAD----------SIPVVSLVKSDGTVETLLTLPDA-IF-- 118 (306)
T ss_dssp TEEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEECTT----------SCEEEEEECTTSCEEEEEECTTC-SC--
T ss_pred CeEEEECCCCceEEEEeCCCCceeEEEcCCCc-EEEEeccCC----------cceEEEEcCCCCeEEEEEeCCCc-cc--
Confidence 578999987754333222 5677899999998 555432210 02477777766666555433211 00
Q ss_pred ccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEE-ee-------c--c-cceeee
Q 004456 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-HK-------L--D-LRFRSV 304 (752)
Q Consensus 236 ~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-~~-------~--~-~~~~~~ 304 (752)
...+...+++. +++... ..+.||++|. .++..+.. .. . . .....+
T Consensus 119 --------~~g~~~~~~~~--~~v~d~-----------~~g~i~~~d~---~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 119 --------LNGITPLSDTQ--YLTADS-----------YRGAIWLIDV---VQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp --------EEEEEESSSSE--EEEEET-----------TTTEEEEEET---TTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred --------cCcccccCCCc--EEEEEC-----------CCCeEEEEeC---CCCcEeEEEECCccccccccCCCCcCCCc
Confidence 11223333332 444421 2347788876 32211111 00 0 0 111223
Q ss_pred eeecCCceEEEeeecccCceeEEEEcCCC-CCc-cceeccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEE
Q 004456 305 SWCDDSLALVNETWYKTSQTRTWLVCPGS-KDV-APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 382 (752)
Q Consensus 305 ~~spDg~~l~~~~~~~~~~~~l~~~~~~~-~~~-~~~~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~ 382 (752)
+||++.|+++.. ...+|+++++++ +.. ....+.... ..--++.++||+ |+++..
T Consensus 175 --s~dg~~lyv~d~---~~~~I~~~~~~~~g~~~~~~~~~~~~--------~P~gi~vd~dG~-l~va~~---------- 230 (306)
T 2p4o_A 175 --KRFGNFLYVSNT---EKMLLLRIPVDSTDKPGEPEIFVEQT--------NIDDFAFDVEGN-LYGATH---------- 230 (306)
T ss_dssp --EEETTEEEEEET---TTTEEEEEEBCTTSCBCCCEEEEESC--------CCSSEEEBTTCC-EEEECB----------
T ss_pred --CcCCCEEEEEeC---CCCEEEEEEeCCCCCCCccEEEeccC--------CCCCeEECCCCC-EEEEeC----------
Confidence 899988877642 334699998875 211 111111111 011266788885 444431
Q ss_pred EccCCCCCCCCCCeeEEEecCCCceeEEeeccchhhhhceeeeecCCcceecc---cCCCEEEEEEec
Q 004456 383 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN---LNQLKILTSKES 447 (752)
Q Consensus 383 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s---~d~~~l~~~~~~ 447 (752)
....|.++|.+ |+...+...... ...+. .++|+ +|+++|+.+...
T Consensus 231 ----------~~~~V~~~~~~-G~~~~~~~~~~~--~~~p~-------~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 ----------IYNSVVRIAPD-RSTTIIAQAEQG--VIGST-------AVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ----------TTCCEEEECTT-CCEEEEECGGGT--CTTEE-------EEEECCSTTTTTEEEEEECT
T ss_pred ----------CCCeEEEECCC-CCEEEEeecccc--cCCce-------EEEEecccCCCCEEEEECCC
Confidence 12258889875 665444222111 01122 24677 788888877654
No 484
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.94 E-value=4.2e-05 Score=78.68 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=30.9
Q ss_pred CCcEEEEEeChHHHHHHHHHHh-------------------CC------CceeEEEEccCCC
Q 004456 601 PSRIAVGGHSYGAFMTAHLLAH-------------------AP------HLFCCGIARSGSY 637 (752)
Q Consensus 601 ~~~i~l~G~S~GG~~a~~~~~~-------------------~p------~~~~~~v~~~~~~ 637 (752)
.+++.|+||||||.++..++.+ +| ++++.+|++++..
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 4789999999999999999872 35 6899999988653
No 485
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.92 E-value=0.0043 Score=63.56 Aligned_cols=154 Identities=19% Similarity=0.165 Sum_probs=80.8
Q ss_pred cEEEEEccCCCcccc------CCc-cceeccccCCC---CceEEEEecc-cCccccccccCccccEEEEecCCc-----e
Q 004456 157 AQLVLGSLDGTAKDF------GTP-AVYTAVEPSPD---QKYVLITSMH-RPYSYKVPCARFSQKVQVWTTDGK-----L 220 (752)
Q Consensus 157 ~~i~~~~~~G~~~~l------~~~-~~~~~~~~SpD---Gk~l~~~~~~-~~~~~~~~~~~~~~~l~~~d~~~~-----~ 220 (752)
+.|++++.+|+ +.+ ... .....++++|| +.+|++.... ... ......|..++.++. .
T Consensus 49 g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~------~~~~~~v~r~~~~~~~~~~~~ 121 (354)
T 3a9g_A 49 GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG------GHIRNRVIRGRLDGSTFKLKE 121 (354)
T ss_dssp TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG------GCEEEEEEEEEECSSSCCEEE
T ss_pred CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC------CCcceEEEEEEECCCCcCcCc
Confidence 46777776664 222 112 45778999998 7777776432 100 001136777777654 1
Q ss_pred eEEe-cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC--CccccCccceEEeccCCCCCCC--------
Q 004456 221 VREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD--ANVEVSPRDIIYTQPAEPAEGE-------- 289 (752)
Q Consensus 221 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~-------- 289 (752)
.+.+ ...+... .-....++|+|||+ ||++....+.. .+......+.|+.++. ++.
T Consensus 122 ~~~l~~~~~~~~---------~h~~~~l~~~pDG~--Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~---dG~~p~~npf~ 187 (354)
T 3a9g_A 122 VKTLIDGIPGAY---------IHNGGRIRFGPDGM--LYITTGDAADPRLAQDLSSLAGKILRVDE---EGRPPADNPFP 187 (354)
T ss_dssp EEEEEEEEECCS---------SCCCCCEEECTTSC--EEEECCCTTCGGGGTCTTCCSSEEEEECT---TSCCCTTSSST
T ss_pred cEEEEEcCCCCC---------CcCCceEEECCCCc--EEEEECCCCCCccccCCCCCCeEEEEEcC---CCCCCCCCCCC
Confidence 2222 1111100 01135799999996 77774221111 0111234568899887 444
Q ss_pred CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 290 KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 290 ~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
....+..+-.....++|+|+...|+++........+|.++..
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 234444444455678899954446555433323345666654
No 486
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.92 E-value=3.6e-05 Score=80.42 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=31.9
Q ss_pred CcEEEEEeChHHHHHHHHHHh--------------------------CCCceeEEEEccCCC
Q 004456 602 SRIAVGGHSYGAFMTAHLLAH--------------------------APHLFCCGIARSGSY 637 (752)
Q Consensus 602 ~~i~l~G~S~GG~~a~~~~~~--------------------------~p~~~~~~v~~~~~~ 637 (752)
.++.|+||||||.++..++.. +|++++.+|++++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPH 212 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCC
Confidence 689999999999999998876 688999999998753
No 487
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.0015 Score=69.18 Aligned_cols=158 Identities=11% Similarity=0.138 Sum_probs=97.7
Q ss_pred eeceeEecC-CCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCC
Q 004456 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (752)
Q Consensus 32 ~~~~~~~SP-DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~ 110 (752)
....++++| ++..|.++ . .. ..|++++++++..+.+..... ....++|+++|+.|+++......
T Consensus 138 ~P~~lavdp~~~g~Lyv~-d--------~~-~~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~~~~~ 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLV-G--------EQ-HPTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITNDQNNN 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEE-E--------BT-EEEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEECCSCT
T ss_pred CCCEEEECCCCCCeEEEE-e--------CC-CcEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeCCCCc
Confidence 356678999 46666553 2 11 789999999888766643221 24578999999988876331110
Q ss_pred CCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCcc---ccCCccceeccccCCCCc
Q 004456 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAK---DFGTPAVYTAVEPSPDQK 187 (752)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~~---~l~~~~~~~~~~~SpDGk 187 (752)
. ...++.++.+|... .+........++++|++.
T Consensus 203 ~--------------------------------------------~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g 238 (430)
T 3tc9_A 203 D--------------------------------------------RPNNYILTRESGFKVITELTKGQNCNGAETHPING 238 (430)
T ss_dssp T--------------------------------------------SEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTC
T ss_pred c--------------------------------------------cceEEEEeCCCceeeeeeeccCCCceEEEEeCCCC
Confidence 0 02355555555322 222224566788999666
Q ss_pred eEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC
Q 004456 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (752)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~ 267 (752)
.|++..... ..|++++.+++....+...... ..++.++|+|||++ ||++..
T Consensus 239 ~lyv~d~~~------------~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~~-lyv~d~----- 289 (430)
T 3tc9_A 239 ELYFNSWNA------------GQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGNY-AYIVVV----- 289 (430)
T ss_dssp CEEEEETTT------------TEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSSE-EEEEET-----
T ss_pred EEEEEECCC------------CEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCCE-EEEEEC-----
Confidence 787775543 4799999988766444322211 12568999999997 777742
Q ss_pred CccccCccceEEeccC
Q 004456 268 ANVEVSPRDIIYTQPA 283 (752)
Q Consensus 268 ~~~~~~~~~~l~~~~~ 283 (752)
....|++++.
T Consensus 290 ------~~~~I~~~~~ 299 (430)
T 3tc9_A 290 ------NQHYILRSDY 299 (430)
T ss_dssp ------TTTEEEEEEE
T ss_pred ------CCCEEEEEeC
Confidence 3346777665
No 488
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.83 E-value=0.0019 Score=61.76 Aligned_cols=203 Identities=9% Similarity=-0.001 Sum_probs=109.1
Q ss_pred eeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCce
Q 004456 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (752)
Q Consensus 177 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~ 256 (752)
...+.|+ || .|+....... .+.|.++|+.+++...-...+.. .+.-..+++|++
T Consensus 45 tqGL~~~-~~-~LyestG~~g----------~S~v~~vD~~Tgkv~~~~~l~~~-------------~FgeGit~~g~~- 98 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNG----------RSSIRKVDIESGKTLQQIELGKR-------------YFGEGISDWKDK- 98 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETT----------EEEEEEECTTTCCEEEEEECCTT-------------CCEEEEEEETTE-
T ss_pred cceEEEE-CC-EEEEECCCCC----------CceEEEEECCCCcEEEEEecCCc-------------cceeEEEEeCCE-
Confidence 3567787 55 6766654421 14788999998876543333221 333346677886
Q ss_pred EEEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCC
Q 004456 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (752)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~ 335 (752)
||.+.. ..+.++++|. ++.+. ..+.- .. .....++|++.|+.+. +...|+.+|+++..
T Consensus 99 ly~ltw-----------~~~~v~v~D~---~t~~~~~ti~~-~~--eG~glt~dg~~L~~Sd----Gs~~i~~iDp~T~~ 157 (262)
T 3nol_A 99 IVGLTW-----------KNGLGFVWNI---RNLRQVRSFNY-DG--EGWGLTHNDQYLIMSD----GTPVLRFLDPESLT 157 (262)
T ss_dssp EEEEES-----------SSSEEEEEET---TTCCEEEEEEC-SS--CCCCEEECSSCEEECC----SSSEEEEECTTTCS
T ss_pred EEEEEe-----------eCCEEEEEEC---ccCcEEEEEEC-CC--CceEEecCCCEEEEEC----CCCeEEEEcCCCCe
Confidence 776641 3458999998 33333 23332 22 2234568898777754 24579999998852
Q ss_pred cccee--ccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeec
Q 004456 336 VAPRV--LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (752)
Q Consensus 336 ~~~~~--l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (752)
.... +......- .....+.|. +|+ |+... .....|.++|+++|++....+.
T Consensus 158 -v~~~I~V~~~g~~~----~~lNELe~~-~G~-lyan~--------------------w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 158 -PVRTITVTAHGEEL----PELNELEWV-DGE-IFANV--------------------WQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp -EEEEEECEETTEEC----CCEEEEEEE-TTE-EEEEE--------------------TTSSEEEEECTTTCBEEEEEEC
T ss_pred -EEEEEEeccCCccc----cccceeEEE-CCE-EEEEE--------------------ccCCeEEEEECCCCcEEEEEEC
Confidence 1111 11100000 000013454 663 44333 1223699999999998766554
Q ss_pred cchhhhhcee---eeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 414 NREKYFETAV---ALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 414 ~~~~~~~~~~---~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
.+- ..... .....-.-++++|+++.|+.+..... .+|.+.
T Consensus 211 ~~L--~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp---~~~ev~ 253 (262)
T 3nol_A 211 NGI--LAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP---KVFEIT 253 (262)
T ss_dssp TTG--GGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS---EEEEEE
T ss_pred CcC--ccccccccCcCCceEEEEEcCCCCEEEEECCCCC---ceEEEE
Confidence 311 00000 00001112689999999888764433 455544
No 489
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.77 E-value=0.0042 Score=62.87 Aligned_cols=148 Identities=14% Similarity=0.025 Sum_probs=79.3
Q ss_pred EEEEEccC-CCccccCCc------cceeccccCC-CCceEEEEecccCcccc-----ccccCccccEEEEecCCceeEEe
Q 004456 158 QLVLGSLD-GTAKDFGTP------AVYTAVEPSP-DQKYVLITSMHRPYSYK-----VPCARFSQKVQVWTTDGKLVREL 224 (752)
Q Consensus 158 ~i~~~~~~-G~~~~l~~~------~~~~~~~~Sp-DGk~l~~~~~~~~~~~~-----~~~~~~~~~l~~~d~~~~~~~~l 224 (752)
.|++++.+ |..+.+... .....+.+.| ||+ |+++......... .........++.++.++++.+.+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 36777774 344433221 2346788999 884 6665432110000 00001125688899887765544
Q ss_pred cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecccceeee
Q 004456 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSV 304 (752)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 304 (752)
.... ..+..++|+|||+. ||++.. ....|++++......+..+.+....+ ...+
T Consensus 181 ~~~~-------------~~p~gia~~~dg~~-lyv~d~-----------~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi 234 (322)
T 2fp8_A 181 LKEL-------------HVPGGAEVSADSSF-VLVAEF-----------LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI 234 (322)
T ss_dssp EEEE-------------SCCCEEEECTTSSE-EEEEEG-----------GGTEEEEEESSSTTTTCEEEEEECSS-EEEE
T ss_pred ccCC-------------ccCcceEECCCCCE-EEEEeC-----------CCCeEEEEECCCCcCCccceEEeCCC-CCCe
Confidence 2211 11446899999996 776642 23478888873111122333333333 5667
Q ss_pred eeecCCceEEEeeecc-------cCceeEEEEcCCC
Q 004456 305 SWCDDSLALVNETWYK-------TSQTRTWLVCPGS 333 (752)
Q Consensus 305 ~~spDg~~l~~~~~~~-------~~~~~l~~~~~~~ 333 (752)
++.++|+ |+++.... +....|++++.++
T Consensus 235 ~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 235 KRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred EECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 8889997 44443221 1235688998764
No 490
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.75 E-value=0.0034 Score=63.52 Aligned_cols=129 Identities=9% Similarity=0.024 Sum_probs=73.2
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeee-CCC
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKP 254 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~ 254 (752)
....++++|++..|++.... ..+++++.+++..+.+...... .+ ...+.+++++| ||+
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-------------~~i~~~d~~~g~~~~~~~~~~~--~~------~~~p~~i~~d~~~G~ 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-------------YHLSVVGSEGGHATQLATSVDG--VP------FKWLYAVTVDQRTGI 139 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-------------TEEEEECTTCEECEEEESEETT--EE------CSCEEEEEECTTTCC
T ss_pred CCceEEEcCCCCcEEEEECC-------------CCEEEEeCCCCEEEEecccCCC--Cc------ccccceEEEecCCCE
Confidence 45677888844456665333 2477888887765554322110 00 01245689999 996
Q ss_pred ceEEEEEeccCCCCc------cccCccceEEeccCCCCCCCCCeEEeecccceeeeeeecCCceEEEeeecccCceeEEE
Q 004456 255 STLYWVEAQDRGDAN------VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (752)
Q Consensus 255 ~~l~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~ 328 (752)
||++......... ......+.|++++. +++....+...-.....++|+|||+.|+++.. ...+|++
T Consensus 140 --l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~---~~~~I~~ 211 (322)
T 2fp8_A 140 --VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLLKELHVPGGAEVSADSSFVLVAEF---LSHQIVK 211 (322)
T ss_dssp --EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEEEEESCCCEEEECTTSSEEEEEEG---GGTEEEE
T ss_pred --EEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEeccCCccCcceEECCCCCEEEEEeC---CCCeEEE
Confidence 7777532110000 00112357888887 44444444433334456889999998777642 2346999
Q ss_pred EcCCC
Q 004456 329 VCPGS 333 (752)
Q Consensus 329 ~~~~~ 333 (752)
+++++
T Consensus 212 ~~~~~ 216 (322)
T 2fp8_A 212 YWLEG 216 (322)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 99876
No 491
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.72 E-value=0.0013 Score=62.82 Aligned_cols=193 Identities=8% Similarity=0.050 Sum_probs=110.7
Q ss_pred ceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 004456 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (752)
Q Consensus 34 ~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~ 113 (752)
....|+ || . +|.++.. .+...|.++|+++|+..+-...+. ....-..+++++.|+.+..
T Consensus 46 qGL~~~-~~-~-LyestG~------~g~S~v~~vD~~Tgkv~~~~~l~~-----~~FgeGit~~g~~ly~ltw------- 104 (262)
T 3nol_A 46 EGFFYR-NG-Y-FYESTGL------NGRSSIRKVDIESGKTLQQIELGK-----RYFGEGISDWKDKIVGLTW------- 104 (262)
T ss_dssp EEEEEE-TT-E-EEEEEEE------TTEEEEEEECTTTCCEEEEEECCT-----TCCEEEEEEETTEEEEEES-------
T ss_pred ceEEEE-CC-E-EEEECCC------CCCceEEEEECCCCcEEEEEecCC-----ccceeEEEEeCCEEEEEEe-------
Confidence 667888 55 4 4544311 344689999999998654333332 1222245667888887633
Q ss_pred CCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc-CCC-ccccCCccceeccccCCCCceEEE
Q 004456 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLI 191 (752)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~-~G~-~~~l~~~~~~~~~~~SpDGk~l~~ 191 (752)
+...++++|. +++ ..++.... ....+++||++|+.
T Consensus 105 -----------------------------------------~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~ 141 (262)
T 3nol_A 105 -----------------------------------------KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIM 141 (262)
T ss_dssp -----------------------------------------SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEE
T ss_pred -----------------------------------------eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEE
Confidence 2268999998 664 33443322 44566689999877
Q ss_pred EecccCccccccccCccccEEEEecCCceeE-EecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCCCcc
Q 004456 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (752)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~ 270 (752)
+.. . ..|+.+|..+.+.. .+.... . ..|. ..+.++.|. ||+ |+...
T Consensus 142 SdG-s------------~~i~~iDp~T~~v~~~I~V~~-~-g~~~------~~lNELe~~-~G~--lyan~--------- 188 (262)
T 3nol_A 142 SDG-T------------PVLRFLDPESLTPVRTITVTA-H-GEEL------PELNELEWV-DGE--IFANV--------- 188 (262)
T ss_dssp CCS-S------------SEEEEECTTTCSEEEEEECEE-T-TEEC------CCEEEEEEE-TTE--EEEEE---------
T ss_pred ECC-C------------CeEEEEcCCCCeEEEEEEecc-C-Cccc------cccceeEEE-CCE--EEEEE---------
Confidence 643 2 37899998875443 222211 0 0010 112346776 774 55332
Q ss_pred ccCccceEEeccCCCCCCCCCeEEeec-------------ccceeeeeeecCCceEEEeeecccCceeEEEEcC
Q 004456 271 EVSPRDIIYTQPAEPAEGEKPEILHKL-------------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (752)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 331 (752)
...+.|.++|. ++++....... ......++|+|+++.|+.+... +..+|.+.+
T Consensus 189 --w~~~~I~vIDp---~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~---Wp~~~ev~~ 254 (262)
T 3nol_A 189 --WQTNKIVRIDP---ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL---WPKVFEITL 254 (262)
T ss_dssp --TTSSEEEEECT---TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT---CSEEEEEEE
T ss_pred --ccCCeEEEEEC---CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC---CCceEEEEE
Confidence 23457888887 44444332221 1234679999999988876532 335666654
No 492
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.0097 Score=57.20 Aligned_cols=202 Identities=10% Similarity=0.073 Sum_probs=113.5
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCCCC
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~ 111 (752)
.++..+|.||++.|+.+.. ....|+.+++++...+++...... ....+++.+++.+ +++...
T Consensus 28 ~lSGla~~~~~~~L~aV~d---------~~~~I~~ld~~g~v~~~i~l~g~~----D~EGIa~~~~g~~-~vs~E~---- 89 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTIN---------KPAAIVEMTTNGDLIRTIPLDFVK----DLETIEYIGDNQF-VISDER---- 89 (255)
T ss_dssp CEEEEEEETTTTEEEEEEE---------TTEEEEEEETTCCEEEEEECSSCS----SEEEEEECSTTEE-EEEETT----
T ss_pred CcceeEEeCCCCEEEEEEC---------CCCeEEEEeCCCCEEEEEecCCCC----ChHHeEEeCCCEE-EEEECC----
Confidence 4888999999988876543 358899999985545555332211 3567788888874 333221
Q ss_pred CCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEcc--CCCcc-------cc---CCccceec
Q 004456 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAK-------DF---GTPAVYTA 179 (752)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~--~G~~~-------~l---~~~~~~~~ 179 (752)
...|+++++ ++... .+ ....++..
T Consensus 90 --------------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG 125 (255)
T 3qqz_A 90 --------------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG 125 (255)
T ss_dssp --------------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred --------------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence 024444444 22211 11 11256789
Q ss_pred cccCCCCceEEEEecccCccccccccCccccEEEEe--cCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceE
Q 004456 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT--TDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTL 257 (752)
Q Consensus 180 ~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l 257 (752)
++|+|++++|+......+ ..|+.++ +.+.....+......... ......++++.|.-.. +
T Consensus 126 LA~d~~~~~L~va~E~~p-----------~~i~~~~g~~~~~~l~i~~~~~~~~~~------~~~d~S~l~~dp~tg~-l 187 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKEKNP-----------IEVYKVNGLLSSNELHISKDKALQRQF------TLDDVSGAEFNQQKNT-L 187 (255)
T ss_dssp EEEETTTTEEEEEEESSS-----------EEEEEEESTTCSSCCEEEECHHHHHTC------CSSCCCEEEEETTTTE-E
T ss_pred EEEeCCCCEEEEEECcCC-----------ceEEEEcccccCCceeeecchhhcccc------ccCCceeEEEcCCCCe-E
Confidence 999999999988765542 3567776 122222222110000000 0012457899998776 7
Q ss_pred EEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeecc----------cceeeeeeecCCceEEEeeecccCceeEE
Q 004456 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD----------LRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (752)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 327 (752)
+.++. ....|+.+|. ++. +....... ...-.+++.++|+ |+..+ .. +.+|
T Consensus 188 liLS~-----------~s~~L~~~d~---~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvs-E~---n~~y 247 (255)
T 3qqz_A 188 LVLSH-----------ESRALQEVTL---VGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVS-EP---NRFY 247 (255)
T ss_dssp EEEET-----------TTTEEEEECT---TCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEE-TT---TEEE
T ss_pred EEEEC-----------CCCeEEEEcC---CCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEc-CC---ceEE
Confidence 77753 3347888887 554 43332222 1234578999997 55544 22 2588
Q ss_pred EEcCCC
Q 004456 328 LVCPGS 333 (752)
Q Consensus 328 ~~~~~~ 333 (752)
++....
T Consensus 248 ~f~~~~ 253 (255)
T 3qqz_A 248 RFTPQS 253 (255)
T ss_dssp EEEC--
T ss_pred EEEecC
Confidence 876543
No 493
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.67 E-value=0.0021 Score=65.87 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=58.2
Q ss_pred ceeccccCCCCceEEEEecccCccccccccCccccEEEEecC---Ccee--EEecCCCCCCCCCcccCCccccccceeee
Q 004456 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD---GKLV--RELCDLPPAEDIPVCYNSVREGMRSISWR 250 (752)
Q Consensus 176 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~---~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (752)
....++|||||+.|++..... ..++.++.+ .+.. .++... .. .......+..++++
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~------------~~l~~~~~~~~~~~~~~~~~~~~~-~~------~~g~~g~pdgia~d 256 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHS------------TSMYRIKSADLSNLQLTDAELGSK-IE------RYSEKPICDGISID 256 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSC------------SEEEEEEHHHHTCTTCCHHHHHTT-CE------EEEECCSCSCEEEC
T ss_pred ccceeEeccCCCEEEEEeCCC------------CeEEEEEHHHhcCCCCChhhhhcc-eE------ecccCCCCceEEEC
Confidence 346799999999999986543 256666532 1000 000000 00 00000124578999
Q ss_pred eCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEeec--ccceeeeeeecCCceEEEe
Q 004456 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNE 316 (752)
Q Consensus 251 pDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~~~~~~~~~spDg~~l~~~ 316 (752)
+||. ||++.. ..+.|.+++. +.++...+... ......+++++||+.++..
T Consensus 257 ~~G~--l~va~~-----------~~~~V~~~d~---~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 257 KDHN--IYVGDL-----------AHSAIGVITS---ADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TTCC--EEEEEG-----------GGTEEEEEET---TTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCCC--EEEEcc-----------CCCeEEEEEC---CCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 9986 666642 3447888886 23444444432 2335678899998644443
No 494
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.64 E-value=0.0088 Score=57.51 Aligned_cols=146 Identities=10% Similarity=0.104 Sum_probs=79.6
Q ss_pred cEEEEEccCCCc-ccc--CCccceeccccCCCCceEEEEecccCccccccccCccccEEEEecCCcee-EEecCCCCCCC
Q 004456 157 AQLVLGSLDGTA-KDF--GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAED 232 (752)
Q Consensus 157 ~~i~~~~~~G~~-~~l--~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~ 232 (752)
..|+.+|++|+. +++ ....+...+++.++|+++ +..... ..+++++++.... ..+.....
T Consensus 49 ~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~-vs~E~~------------~~l~~~~v~~~~~i~~~~~~~~--- 112 (255)
T 3qqz_A 49 AAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFV-ISDERD------------YAIYVISLTPNSEVKILKKIKI--- 112 (255)
T ss_dssp EEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEE-EEETTT------------TEEEEEEECTTCCEEEEEEEEC---
T ss_pred CeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEE-EEECCC------------CcEEEEEcCCCCeeeeeeeecc---
Confidence 689999998843 333 222678899999998643 332221 3677776653321 11111100
Q ss_pred CCcccCCccccccceeeeeCCCceEEEEEeccCCCCccccCccceEEeccCCCCCCCCCeEEee-------cccceeeee
Q 004456 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------LDLRFRSVS 305 (752)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~~~~~~ 305 (752)
+........+...++|+|++++ |+.+... ....||.++- -..+...+.+.. .......++
T Consensus 113 -~~~~~~~N~g~EGLA~d~~~~~-L~va~E~----------~p~~i~~~~g-~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 113 -PLQESPTNCGFEGLAYSRQDHT-FWFFKEK----------NPIEVYKVNG-LLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp -CCSSCCCSSCCEEEEEETTTTE-EEEEEES----------SSEEEEEEES-TTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred -ccccccccCCcceEEEeCCCCE-EEEEECc----------CCceEEEEcc-cccCCceeeecchhhccccccCCceeEE
Confidence 0000111234568999999987 6666532 1225666651 001222222211 112456788
Q ss_pred eecCCceEEEeeecccCceeEEEEcCCCC
Q 004456 306 WCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (752)
Q Consensus 306 ~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 334 (752)
+.|....+++.+. ....|..+|.++.
T Consensus 180 ~dp~tg~lliLS~---~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 180 FNQQKNTLLVLSH---ESRALQEVTLVGE 205 (255)
T ss_dssp EETTTTEEEEEET---TTTEEEEECTTCC
T ss_pred EcCCCCeEEEEEC---CCCeEEEEcCCCC
Confidence 8888777777652 2246888888763
No 495
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.60 E-value=0.013 Score=59.14 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=36.9
Q ss_pred eeceeEecCCCCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCc--cccccccceEEecC---CcEEEEE
Q 004456 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNN---STLLIFT 104 (752)
Q Consensus 32 ~~~~~~~SPDG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspd---g~~l~~~ 104 (752)
..+.++|.|||+ |.++. .....|++++.++++...+...+.- .-......++++|| +.+||+.
T Consensus 33 ~P~~ia~~pdG~-llVte---------r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 33 SPWGLAPLPGGD-LLVSS---------RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEECTTSC-EEEEE---------TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEEcCCCc-EEEEE---------ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 467789999997 33321 1247899998777766554322210 00113457899996 4556543
No 496
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.58 E-value=0.046 Score=55.10 Aligned_cols=151 Identities=16% Similarity=0.186 Sum_probs=80.0
Q ss_pred cEEEEEcc-CCCcccc-------CCc-cceeccccCCC---CceEEEEecccCccccccccCccccEEEEecCCce----
Q 004456 157 AQLVLGSL-DGTAKDF-------GTP-AVYTAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---- 220 (752)
Q Consensus 157 ~~i~~~~~-~G~~~~l-------~~~-~~~~~~~~SpD---Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~---- 220 (752)
+.|++++. +|+...+ ... .+...++++|| +.+|++...... ...|..+.+++.+
T Consensus 53 G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~----------~~~v~R~~~~~~~~~~~ 122 (347)
T 3das_A 53 ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS----------DNRIVRMLYDEKKPSGE 122 (347)
T ss_dssp CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS----------SEEEEEEEBCTTSCTTC
T ss_pred CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC----------CCEEEEEEeCCCCcccc
Confidence 67888887 4543322 112 56778999997 556665432211 1356777665421
Q ss_pred ----eEE-ecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC--CccccCccceEEeccCCCCCCC----
Q 004456 221 ----VRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD--ANVEVSPRDIIYTQPAEPAEGE---- 289 (752)
Q Consensus 221 ----~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~---- 289 (752)
.+. +...+.. ..-....+.|.|||+ ||++.-..+.. .+......+.|+.++. +++
T Consensus 123 ~~~~~~~i~~~~p~~---------~~H~g~~l~fgpDG~--Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~---dG~ip~~ 188 (347)
T 3das_A 123 QLGAPDTVFRGIPKG---------VIHNGGRIAFGPDKM--LYAGTGESGDTGLSQDRKSLGGKILRMTP---DGEPAPG 188 (347)
T ss_dssp CBCCCEEEEEEECCC---------SSCCCCCEEECTTSC--EEEECBCTTCGGGTTCTTCSTTCEEEECT---TSSBCTT
T ss_pred cCCCcEEEEEcCCCC---------CCccCccccCCCCCC--EEEEECCCCCCccccCCCCCCCEEEEEeC---CCCccCC
Confidence 111 1111111 001135799999996 77774322211 1112235678999988 444
Q ss_pred ----CCeEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCC
Q 004456 290 ----KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (752)
Q Consensus 290 ----~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 332 (752)
.......+-.....++|.|+|+ |++..+......+|.++...
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G 234 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPG 234 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTT
T ss_pred CCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCC
Confidence 2233444444566789999875 44443332233566666543
No 497
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.51 E-value=0.01 Score=62.61 Aligned_cols=157 Identities=10% Similarity=0.048 Sum_probs=91.4
Q ss_pred eeceeEecCC--CCeEEEeeccccccccccCcceEEEEEcccCcceeccCCCCccccccccceEEecCCcEEEEEecCCC
Q 004456 32 KINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (752)
Q Consensus 32 ~~~~~~~SPD--G~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~ 109 (752)
....++|+|+ +..|.++ . .. ..|++++.++++.+.+..... ....++|++||+ |+++.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D--------~~-~~I~~id~~~g~v~~~~~~~~-----~P~giavd~dG~-lyVad~~~~ 203 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-G--------QR-DAFRHVDFVNQYVDIKTTNIG-----QCADVNFTLNGD-MVVVDDQSS 203 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-C--------BT-SCEEEEETTTTEEEEECCCCS-----CEEEEEECTTCC-EEEEECCSC
T ss_pred CCceEEEccccCCCEEEEE-e--------CC-CCEEEEECCCCEEEEeecCCC-----CccEEEECCCCC-EEEEcCCCC
Confidence 3456889995 4455443 2 11 789999998888776643211 245789999999 776632110
Q ss_pred CCCCCCccCCCCCceecccccccccccchhhccCChhhhhhhhhhcccEEEEEccCCCc---cccCCccceeccccCCCC
Q 004456 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQ 186 (752)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~~~~~~G~~---~~l~~~~~~~~~~~SpDG 186 (752)
.. ...++.++.++.. ..+........++++|++
T Consensus 204 ~~--------------------------------------------~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~ 239 (433)
T 4hw6_A 204 DT--------------------------------------------NTGIYLFTRASGFTERLSLCNARGAKTCAVHPQN 239 (433)
T ss_dssp TT--------------------------------------------SEEEEEECGGGTTCCEEEEEECSSBCCCEECTTT
T ss_pred cc--------------------------------------------cceEEEEECCCCeeccccccccCCCCEEEEeCCC
Confidence 00 0234444443311 112222456678999966
Q ss_pred ceEEEEecccCccccccccCccccEEEEecCCcee-EEecCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccC
Q 004456 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (752)
Q Consensus 187 k~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~ 265 (752)
..|++..... ..|++++.+++.. ..+...... + ....++|+|||++ ||++..
T Consensus 240 G~lyv~d~~~------------~~V~~~d~~~g~~~~~~~~~~~~---~--------~~~~ia~dpdG~~-LYvad~--- 292 (433)
T 4hw6_A 240 GKIYYTRYHH------------AMISSYDPATGTLTEEEVMMDTK---G--------SNFHIVWHPTGDW-AYIIYN--- 292 (433)
T ss_dssp CCEEECBTTC------------SEEEEECTTTCCEEEEEEECSCC---S--------SCEEEEECTTSSE-EEEEET---
T ss_pred CeEEEEECCC------------CEEEEEECCCCeEEEEEeccCCC---C--------CcccEEEeCCCCE-EEEEeC---
Confidence 6787775443 4789999885554 333222111 0 1235899999997 777742
Q ss_pred CCCccccCccceEEeccC
Q 004456 266 GDANVEVSPRDIIYTQPA 283 (752)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~ 283 (752)
....|+.++.
T Consensus 293 --------~~~~I~~~~~ 302 (433)
T 4hw6_A 293 --------GKHCIYRVDY 302 (433)
T ss_dssp --------TTTEEEEEEB
T ss_pred --------CCCEEEEEeC
Confidence 3346777665
No 498
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.50 E-value=0.0032 Score=63.94 Aligned_cols=158 Identities=18% Similarity=0.070 Sum_probs=88.3
Q ss_pred eeEEeecCCCCCCCCceeecCCC---C--CceeceeEecC--CCCeEEEeeccccccccccCcceEEEEEcccCcceecc
Q 004456 6 GIGIHRLLPDDSLGPEKEVHGYP---D--GAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (752)
Q Consensus 6 ~i~~~~~~~~~~~g~~~~i~~~~---~--~~~~~~~~~SP--DG~~ia~~~~~~~~~~~~~~~~~l~v~~~~~g~~~~lt 78 (752)
.|+++++.. .+++.+++.... . ..+.....+.+ ||+.-.|+++.. ......+||.++.+++..+.+.
T Consensus 84 ~I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~----~~~s~ielf~~d~~~~~~~~~~ 157 (355)
T 3sre_A 84 KILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP----GSSSTVEVFKFQEEEKSLLHLK 157 (355)
T ss_dssp EEEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS----TTCCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC----CCCCeEEEEEEECCCCEEEEEe
Confidence 477877753 234555554211 1 12445555544 687667777621 1233456777777666655554
Q ss_pred CCCCccccccccceEEecCCcEEEEEecCCCCCCCCCccCCCCCceecccccccccccchhhccCChhhh--hhhhhhcc
Q 004456 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE--SLFDYYTT 156 (752)
Q Consensus 79 ~~~~~~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~ 156 (752)
...+..++ ...+....+||+ ++++... .. ..+.-+ ..+.....
T Consensus 158 ~~~g~~~~-~pND~~v~~~G~-fyvt~~~---~f------------------------------td~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 158 TIRHKLLP-SVNDIVAVGPEH-FYATNDH---YF------------------------------IDPYLKSWEMHLGLAW 202 (355)
T ss_dssp EECCTTCS-SEEEEEEEETTE-EEEEESC---SC------------------------------SSHHHHHHHHHTTCCC
T ss_pred ccccCCCC-CCceEEEeCCCC-EEecCCc---Ee------------------------------CCcccccchhhccCCc
Confidence 33333322 244778889988 3333110 00 000000 00001123
Q ss_pred cEEEEEccCCCccccCCc-cceeccccCCCCceEEEEecccCccccccccCccccEEEEecC
Q 004456 157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (752)
Q Consensus 157 ~~i~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (752)
+.||.++. ++.+.+... .....++|||||++|++..... ..|++++++
T Consensus 203 g~vyr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt~~------------~~I~~~~~~ 251 (355)
T 3sre_A 203 SFVTYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELLA------------HKIHVYEKH 251 (355)
T ss_dssp EEEEEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEEC
T ss_pred cEEEEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeCCC------------CeEEEEEEC
Confidence 68999987 455555544 6677999999999999986553 478888875
No 499
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.47 E-value=0.0064 Score=58.17 Aligned_cols=200 Identities=10% Similarity=-0.032 Sum_probs=105.2
Q ss_pred eccccCCCCceEEEEecccCccccccccCccccEEEEecCCceeEEecCCCCCCCCCcccCCccccccceeeeeCCCceE
Q 004456 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTL 257 (752)
Q Consensus 178 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l 257 (752)
..+.|+ |++|++..... +.|.++|+.+++...-. .+.. .+.-..+++|++ |
T Consensus 58 qGL~~~--~~~Ly~stG~~------------g~v~~iD~~Tgkv~~~~-l~~~-------------~FgeGit~~g~~-L 108 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQ------------GTLRQLSLESAQPVWME-RLGN-------------IFAEGLASDGER-L 108 (268)
T ss_dssp EEEEEE--TTEEEEEETTT------------TEEEECCSSCSSCSEEE-ECTT-------------CCEEEEEECSSC-E
T ss_pred ceEEEE--CCEEEEEcCCC------------CEEEEEECCCCcEEeEE-CCCC-------------cceeEEEEeCCE-E
Confidence 455665 57887776553 35888899877654322 3211 223335677887 7
Q ss_pred EEEEeccCCCCccccCccceEEeccCCCCCCCCC-eEEeecccceeeeeeecCCceEEEeeecccCceeEEEEcCCCCCc
Q 004456 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV 336 (752)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~ 336 (752)
|.+.. ..+.++++|. ++.+. ..+.- ... ....++||+.|+.+. +...|+.+|+++...
T Consensus 109 y~ltw-----------~~~~v~V~D~---~Tl~~~~ti~~-~~e--GwGLt~Dg~~L~vSd----Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 109 YQLTW-----------TEGLLFTWSG---MPPQRERTTRY-SGE--GWGLCYWNGKLVRSD----GGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEES-----------SSCEEEEEET---TTTEEEEEEEC-SSC--CCCEEEETTEEEEEC----SSSEEEEECTTTCCE
T ss_pred EEEEc-----------cCCEEEEEEC---CcCcEEEEEeC-CCc--eeEEecCCCEEEEEC----CCCEEEEEcCCCCeE
Confidence 77642 3458999998 33222 22322 121 234568898777754 345799999988521
Q ss_pred cce-eccccccccccCCCCCCceeeCCCCCeEEEeeeecCCcceEEEEccCCCCCCCCCCeeEEEecCCCceeEEeeccc
Q 004456 337 APR-VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 415 (752)
Q Consensus 337 ~~~-~l~~~~~~~~~~~~~~p~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 415 (752)
... .+......- . ....+.|. ||+ |+... .....|.++|+++|++....+-.+
T Consensus 168 ~~~I~V~~~g~~v-~---~lNeLe~~-dG~-lyanv--------------------w~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 168 VGAVQVKLRGQPV-E---LINELECA-NGV-IYANI--------------------WHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp EEEEECEETTEEC-C---CEEEEEEE-TTE-EEEEE--------------------TTCSEEEEECTTTCBEEEEEECHH
T ss_pred EEEEEeCCCCccc-c---cccccEEe-CCE-EEEEE--------------------CCCCeEEEEeCCCCcEEEEEECCC
Confidence 111 111111100 0 00113344 663 44333 122369999999999866655321
Q ss_pred hhhhhcee----eeecCCcceecccCCCEEEEEEecCCCCcEEEEEE
Q 004456 416 EKYFETAV----ALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (752)
Q Consensus 416 ~~~~~~~~----~~~~~~~~~~~s~d~~~l~~~~~~~~~~~~i~~~d 458 (752)
- ..... .....-.-++++|+++.|+.+- ..+| .+|.+.
T Consensus 222 L--~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG--K~Wp-~~~ev~ 263 (268)
T 3nok_A 222 L--TRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG--KLWP-RLFEVR 263 (268)
T ss_dssp H--HHHHTTTCCCTTCCEEEEEECTTTCCEEEEE--TTCS-EEEEEE
T ss_pred C--cccccccccCcCCceEEEEEcCCCCEEEEeC--CCCC-ceEEEE
Confidence 0 00000 0000011268899999887764 3333 466554
No 500
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.46 E-value=0.067 Score=54.60 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=73.6
Q ss_pred cEEEEEccCCCcccc------CCc-cceeccccCCC---CceEEEEecccCccccccccCccccEEEEecCCce---eEE
Q 004456 157 AQLVLGSLDGTAKDF------GTP-AVYTAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---VRE 223 (752)
Q Consensus 157 ~~i~~~~~~G~~~~l------~~~-~~~~~~~~SpD---Gk~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~~ 223 (752)
+.|++++ +|+.+.+ ... .....++++|| +++|++....... .....|..++.++.. .+.
T Consensus 51 g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-------~~~~~v~r~~~~~~~~~~~~~ 122 (352)
T 2ism_A 51 GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-------GLRNQVVRLRHLGERGVLDRV 122 (352)
T ss_dssp TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-------SSEEEEEEEEECSSCEEEEEE
T ss_pred CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-------CCccEEEEEEeCCCCcCceEE
Confidence 4567666 5532211 112 56778999999 7788776543210 011367778776531 222
Q ss_pred e-cCCCCCCCCCcccCCccccccceeeeeCCCceEEEEEeccCCC--CccccCccceEEeccCCCCCC------------
Q 004456 224 L-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD--ANVEVSPRDIIYTQPAEPAEG------------ 288 (752)
Q Consensus 224 l-~~~~~~~~~~~~~~~~~~~~~~~~wspDG~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~------------ 288 (752)
+ ...+... ...-....++|+|||+ ||++....+.. .+......+.|+.++. ++
T Consensus 123 l~~~~p~~~-------~~~h~~~~l~~~pdG~--Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~---dG~~p~~npf~~~~ 190 (352)
T 2ism_A 123 VLDGIPARP-------HGLHSGGRIAFGPDGM--LYVTTGEVYERELAQDLASLGGKILRLTP---EGEPAPGNPFLGRR 190 (352)
T ss_dssp EEEEECCCT-------TCCCCCCCEEECTTSC--EEEECCCTTCGGGGGCTTCSSSEEEEECT---TSSBCTTCTTTTCT
T ss_pred EEEeCCCCC-------CCCcCCceEEECCCCC--EEEEECCCCCCccccCCCCCceEEEEEcC---CCCCCCCCcccCCC
Confidence 2 2122100 0001135799999995 77774321111 0111234568888887 33
Q ss_pred -CCCeEEeecccceeeeeeecCCceEEEee
Q 004456 289 -EKPEILHKLDLRFRSVSWCDDSLALVNET 317 (752)
Q Consensus 289 -~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 317 (752)
.....+..+-.....++|+|+...|+++.
T Consensus 191 ~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 191 GARPEVYSLGHRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TSCTTEEEECCSEECCCEECTTTCCEEEEE
T ss_pred CCCccEEEEcCCCcccEEEECCCCCEEEEE
Confidence 23344444444566788999544455554
Done!