Query 004458
Match_columns 752
No_of_seqs 515 out of 3312
Neff 7.6
Searched_HMMs 29240
Date Tue Mar 26 01:47:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 5.9E-68 2E-72 626.5 54.8 529 61-602 4-660 (662)
2 2xag_A Lysine-specific histone 100.0 4.1E-64 1.4E-68 601.9 52.5 531 60-603 174-832 (852)
3 4gut_A Lysine-specific histone 100.0 3E-61 1E-65 574.0 49.9 521 69-598 238-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 3.1E-47 1.1E-51 437.5 42.7 429 161-602 7-509 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 4.3E-45 1.5E-49 420.0 38.4 425 162-603 4-457 (520)
6 1b37_A Protein (polyamine oxid 100.0 1.7E-42 5.9E-47 393.5 40.0 433 161-605 3-463 (472)
7 2vvm_A Monoamine oxidase N; FA 100.0 4.2E-43 1.4E-47 400.6 35.0 414 163-604 40-489 (495)
8 2yg5_A Putrescine oxidase; oxi 100.0 6.6E-43 2.3E-47 394.2 34.5 419 162-601 5-452 (453)
9 3k7m_X 6-hydroxy-L-nicotine ox 100.0 1E-40 3.4E-45 373.8 38.3 404 163-599 2-425 (431)
10 2iid_A L-amino-acid oxidase; f 100.0 8.9E-41 3.1E-45 381.7 37.1 420 161-602 32-486 (498)
11 2jae_A L-amino acid oxidase; o 100.0 2.2E-38 7.4E-43 361.1 39.9 426 160-602 9-487 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 1.1E-37 3.8E-42 352.1 31.4 408 162-600 5-468 (470)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 2E-36 6.8E-41 343.6 34.0 410 160-602 14-475 (478)
14 3ayj_A Pro-enzyme of L-phenyla 100.0 6.6E-37 2.3E-41 357.7 21.0 434 162-604 56-683 (721)
15 1sez_A Protoporphyrinogen oxid 100.0 2E-35 6.8E-40 337.8 29.9 414 161-602 12-495 (504)
16 3lov_A Protoporphyrinogen oxid 100.0 3E-35 1E-39 333.8 29.3 408 161-603 3-468 (475)
17 3nks_A Protoporphyrinogen oxid 100.0 4.5E-33 1.6E-37 315.7 25.6 405 162-599 2-473 (477)
18 3ka7_A Oxidoreductase; structu 100.0 1.9E-31 6.6E-36 297.7 36.3 401 163-598 1-425 (425)
19 4dgk_A Phytoene dehydrogenase; 100.0 1.1E-30 3.7E-35 298.2 31.8 418 162-605 1-496 (501)
20 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 8.4E-31 2.9E-35 284.6 28.9 327 163-599 2-341 (342)
21 4gde_A UDP-galactopyranose mut 100.0 1E-30 3.5E-35 298.7 28.2 410 161-598 9-477 (513)
22 3nrn_A Uncharacterized protein 100.0 7.8E-29 2.7E-33 276.8 29.5 389 163-596 1-403 (421)
23 2b9w_A Putative aminooxidase; 100.0 4.7E-29 1.6E-33 278.6 27.7 399 161-597 5-423 (424)
24 4dsg_A UDP-galactopyranose mut 100.0 3.4E-27 1.2E-31 268.7 31.8 416 161-597 8-452 (484)
25 1yvv_A Amine oxidase, flavin-c 99.9 4.8E-25 1.6E-29 237.7 31.1 322 162-601 2-328 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 2.5E-23 8.5E-28 231.0 9.7 252 162-447 7-273 (399)
27 1i8t_A UDP-galactopyranose mut 99.8 2.9E-20 9.8E-25 204.1 20.0 247 163-449 2-261 (367)
28 2bi7_A UDP-galactopyranose mut 99.8 2.7E-20 9.2E-25 205.6 18.8 245 162-445 3-260 (384)
29 2bcg_G Secretory pathway GDP d 99.8 1.5E-17 5E-22 187.6 27.7 373 161-598 10-439 (453)
30 3hdq_A UDP-galactopyranose mut 99.8 2E-17 6.8E-22 182.5 21.6 247 160-449 27-289 (397)
31 3kkj_A Amine oxidase, flavin-c 99.7 2.1E-15 7.1E-20 153.6 30.4 324 162-603 2-330 (336)
32 2e1m_A L-glutamate oxidase; L- 99.7 1.5E-16 5.2E-21 174.1 18.5 234 160-405 42-369 (376)
33 2e1m_C L-glutamate oxidase; L- 99.7 8.6E-18 2.9E-22 165.7 7.2 129 470-603 22-155 (181)
34 1d5t_A Guanine nucleotide diss 99.7 3E-16 1E-20 175.9 17.1 240 161-409 5-290 (433)
35 3p1w_A Rabgdi protein; GDI RAB 99.5 3.8E-14 1.3E-18 159.4 14.8 238 160-406 18-311 (475)
36 1vg0_A RAB proteins geranylger 99.3 2.6E-10 8.8E-15 132.0 24.2 85 349-449 368-461 (650)
37 2e1m_B L-glutamate oxidase; L- 99.3 3.1E-13 1.1E-17 124.7 -0.2 107 393-518 3-110 (130)
38 2fq3_A Transcription regulator 99.3 4.7E-12 1.6E-16 110.6 7.1 84 64-150 15-103 (104)
39 2dce_A KIAA1915 protein; swirm 99.2 8.9E-12 3.1E-16 110.7 6.7 85 65-151 18-107 (111)
40 3ps9_A TRNA 5-methylaminomethy 99.2 9.5E-12 3.2E-16 147.1 6.9 40 162-201 272-311 (676)
41 3oz2_A Digeranylgeranylglycero 99.2 5.4E-10 1.8E-14 121.8 19.5 41 160-200 2-42 (397)
42 3pvc_A TRNA 5-methylaminomethy 99.1 2.4E-11 8.3E-16 143.9 4.6 42 161-202 263-304 (689)
43 3ihg_A RDME; flavoenzyme, anth 99.1 4.5E-09 1.5E-13 120.6 21.9 38 161-198 4-41 (535)
44 1ryi_A Glycine oxidase; flavop 99.0 3.9E-09 1.3E-13 115.1 17.9 41 368-408 178-218 (382)
45 3nyc_A D-arginine dehydrogenas 99.0 2.1E-09 7.3E-14 116.8 15.3 43 160-203 7-49 (381)
46 3rp8_A Flavoprotein monooxygen 99.0 4.5E-08 1.5E-12 108.0 25.5 40 159-198 20-59 (407)
47 3dme_A Conserved exported prot 99.0 5.4E-09 1.8E-13 112.9 16.9 42 162-203 4-45 (369)
48 3dje_A Fructosyl amine: oxygen 98.9 5.6E-09 1.9E-13 116.4 14.9 42 161-202 5-47 (438)
49 3cgv_A Geranylgeranyl reductas 98.9 5.2E-08 1.8E-12 106.5 21.5 39 161-199 3-41 (397)
50 3v76_A Flavoprotein; structura 98.9 1E-08 3.6E-13 113.9 15.9 41 161-201 26-66 (417)
51 3nix_A Flavoprotein/dehydrogen 98.9 1.3E-07 4.4E-12 104.5 21.8 36 162-197 5-40 (421)
52 2qa2_A CABE, polyketide oxygen 98.8 2.8E-07 9.7E-12 104.7 24.5 39 160-198 10-48 (499)
53 3fmw_A Oxygenase; mithramycin, 98.8 1.3E-07 4.5E-12 109.3 22.0 38 161-198 48-85 (570)
54 2qa1_A PGAE, polyketide oxygen 98.8 2.8E-07 9.4E-12 104.9 23.6 39 160-198 9-47 (500)
55 3i3l_A Alkylhalidase CMLS; fla 98.8 9.1E-07 3.1E-11 102.6 26.7 39 160-198 21-59 (591)
56 2vou_A 2,6-dihydroxypyridine h 98.8 6.6E-08 2.3E-12 106.4 15.6 43 367-409 110-153 (397)
57 2uzz_A N-methyl-L-tryptophan o 98.8 4.4E-08 1.5E-12 106.3 13.8 51 359-409 153-204 (372)
58 4a9w_A Monooxygenase; baeyer-v 98.8 2.3E-08 7.8E-13 107.3 11.0 41 162-202 3-43 (357)
59 2oln_A NIKD protein; flavoprot 98.8 8.6E-08 3E-12 105.2 15.8 50 359-408 157-207 (397)
60 2gf3_A MSOX, monomeric sarcosi 98.7 1.4E-07 4.8E-12 102.9 16.8 42 368-409 164-205 (389)
61 1y56_B Sarcosine oxidase; dehy 98.7 1.9E-07 6.6E-12 101.7 17.7 41 368-408 163-204 (382)
62 3e1t_A Halogenase; flavoprotei 98.7 2.1E-07 7.3E-12 106.1 18.1 35 162-196 7-41 (512)
63 2gqf_A Hypothetical protein HI 98.7 6.8E-08 2.3E-12 106.8 12.8 40 162-201 4-43 (401)
64 4at0_A 3-ketosteroid-delta4-5a 98.7 2.4E-07 8.2E-12 105.6 17.5 41 161-201 40-80 (510)
65 2gag_B Heterotetrameric sarcos 98.7 4E-07 1.4E-11 99.8 17.6 41 160-201 19-61 (405)
66 1y0p_A Fumarate reductase flav 98.6 4.4E-07 1.5E-11 105.0 17.2 42 161-202 125-166 (571)
67 2i0z_A NAD(FAD)-utilizing dehy 98.6 9.1E-08 3.1E-12 107.2 11.2 40 161-200 25-64 (447)
68 2gmh_A Electron transfer flavo 98.6 2.9E-06 1E-10 98.3 23.7 41 161-201 34-80 (584)
69 1qo8_A Flavocytochrome C3 fuma 98.6 5.3E-07 1.8E-11 104.1 17.3 41 161-201 120-160 (566)
70 3atr_A Conserved archaeal prot 98.6 2.3E-06 8E-11 95.8 21.4 36 162-197 6-41 (453)
71 4hb9_A Similarities with proba 98.6 4.8E-07 1.6E-11 99.0 15.2 36 163-198 2-37 (412)
72 2xdo_A TETX2 protein; tetracyc 98.6 2.2E-07 7.6E-12 102.2 11.6 40 161-200 25-64 (398)
73 3gwf_A Cyclohexanone monooxyge 98.5 2.1E-07 7.3E-12 106.8 10.9 46 162-207 8-54 (540)
74 2dkh_A 3-hydroxybenzoate hydro 98.5 6.4E-06 2.2E-10 96.4 23.4 37 162-198 32-69 (639)
75 4ap3_A Steroid monooxygenase; 98.5 3.8E-07 1.3E-11 104.9 12.1 46 161-206 20-65 (549)
76 1w4x_A Phenylacetone monooxyge 98.5 4.6E-07 1.6E-11 104.0 12.6 42 161-202 15-56 (542)
77 3c96_A Flavin-containing monoo 98.5 5.2E-07 1.8E-11 99.6 12.5 38 161-198 3-41 (410)
78 1pj5_A N,N-dimethylglycine oxi 98.5 9.6E-07 3.3E-11 106.7 15.7 37 161-197 3-40 (830)
79 3itj_A Thioredoxin reductase 1 98.5 2.3E-07 7.8E-12 98.8 9.0 43 160-202 20-66 (338)
80 2x3n_A Probable FAD-dependent 98.5 4.6E-07 1.6E-11 99.5 11.5 49 360-408 112-165 (399)
81 3alj_A 2-methyl-3-hydroxypyrid 98.5 6.6E-07 2.3E-11 97.6 12.4 40 160-199 9-48 (379)
82 3nlc_A Uncharacterized protein 98.5 7.4E-07 2.5E-11 102.1 13.1 43 160-202 105-147 (549)
83 3axb_A Putative oxidoreductase 98.5 8.1E-07 2.8E-11 99.2 12.9 41 160-200 21-62 (448)
84 2gv8_A Monooxygenase; FMO, FAD 98.4 7.4E-07 2.5E-11 99.7 12.0 42 161-202 5-48 (447)
85 3d1c_A Flavin-containing putat 98.4 8.9E-07 3E-11 95.7 11.8 39 162-201 4-43 (369)
86 3f8d_A Thioredoxin reductase ( 98.4 6E-07 2E-11 94.8 10.0 39 162-202 15-53 (323)
87 3da1_A Glycerol-3-phosphate de 98.4 5E-07 1.7E-11 104.2 9.2 41 161-201 17-57 (561)
88 2vdc_G Glutamate synthase [NAD 98.4 3.6E-07 1.2E-11 102.7 7.8 100 91-201 61-161 (456)
89 3uox_A Otemo; baeyer-villiger 98.4 1.1E-06 3.8E-11 100.9 11.6 42 161-202 8-49 (545)
90 2r0c_A REBC; flavin adenine di 98.4 1.5E-06 5.1E-11 100.0 12.7 38 162-199 26-63 (549)
91 1pn0_A Phenol 2-monooxygenase; 98.3 1.1E-05 3.7E-10 94.9 19.2 36 162-197 8-48 (665)
92 1d4d_A Flavocytochrome C fumar 98.3 5.1E-06 1.7E-10 96.0 15.0 41 161-201 125-165 (572)
93 3fpz_A Thiazole biosynthetic e 98.3 4E-07 1.4E-11 97.4 4.6 42 161-202 64-107 (326)
94 2q0l_A TRXR, thioredoxin reduc 98.2 4.2E-06 1.4E-10 88.2 11.6 38 163-201 2-40 (311)
95 2aqj_A Tryptophan halogenase, 98.2 2.1E-05 7.2E-10 90.0 15.9 34 162-195 5-41 (538)
96 4fk1_A Putative thioredoxin re 98.1 2E-06 6.8E-11 90.8 4.5 40 160-200 4-43 (304)
97 4gcm_A TRXR, thioredoxin reduc 98.0 2.3E-06 8E-11 90.4 4.7 40 162-202 6-45 (312)
98 1gte_A Dihydropyrimidine dehyd 98.0 7.3E-06 2.5E-10 101.0 8.3 106 91-201 118-227 (1025)
99 4a5l_A Thioredoxin reductase; 98.0 4.4E-06 1.5E-10 88.1 4.7 34 162-195 4-37 (314)
100 3urh_A Dihydrolipoyl dehydroge 97.9 6.3E-06 2.2E-10 93.3 4.7 42 160-201 23-64 (491)
101 1rp0_A ARA6, thiazole biosynth 97.9 6.8E-06 2.3E-10 86.1 4.6 41 162-202 39-80 (284)
102 3lzw_A Ferredoxin--NADP reduct 97.9 6.9E-06 2.3E-10 87.0 4.5 40 162-201 7-46 (332)
103 3ab1_A Ferredoxin--NADP reduct 97.9 6.7E-06 2.3E-10 88.8 4.2 41 161-201 13-53 (360)
104 2zbw_A Thioredoxin reductase; 97.9 5.7E-06 2E-10 88.1 3.6 40 162-201 5-44 (335)
105 1c0p_A D-amino acid oxidase; a 97.8 1.2E-05 4.2E-10 86.9 6.0 36 161-196 5-40 (363)
106 3r9u_A Thioredoxin reductase; 97.8 7.2E-06 2.5E-10 86.2 3.9 41 161-202 3-44 (315)
107 3qfa_A Thioredoxin reductase 1 97.8 1.2E-05 4E-10 91.9 5.7 36 160-195 30-65 (519)
108 3jsk_A Cypbp37 protein; octame 97.8 1.1E-05 3.8E-10 86.6 4.7 41 162-202 79-121 (344)
109 3k30_A Histamine dehydrogenase 97.8 1.6E-05 5.5E-10 93.9 6.6 44 160-203 389-432 (690)
110 3o0h_A Glutathione reductase; 97.8 1E-05 3.4E-10 91.5 4.0 39 162-201 26-64 (484)
111 3cty_A Thioredoxin reductase; 97.8 1.3E-05 4.6E-10 84.8 4.5 39 162-201 16-54 (319)
112 3lad_A Dihydrolipoamide dehydr 97.7 1.7E-05 5.8E-10 89.3 5.3 41 161-201 2-42 (476)
113 3l8k_A Dihydrolipoyl dehydroge 97.7 1.2E-05 4E-10 90.5 3.9 41 162-202 4-44 (466)
114 1o94_A Tmadh, trimethylamine d 97.7 2.8E-05 9.5E-10 92.4 7.1 43 160-202 387-429 (729)
115 4dna_A Probable glutathione re 97.7 1.2E-05 4.1E-10 90.3 3.7 39 162-201 5-43 (463)
116 2q7v_A Thioredoxin reductase; 97.7 1.7E-05 5.7E-10 84.2 4.6 41 161-202 7-47 (325)
117 3g3e_A D-amino-acid oxidase; F 97.7 1.2E-05 4.1E-10 86.5 3.5 36 163-198 1-42 (351)
118 2gjc_A Thiazole biosynthetic e 97.7 1.7E-05 5.9E-10 84.6 4.6 41 162-202 65-107 (326)
119 2qcu_A Aerobic glycerol-3-phos 97.7 2.2E-05 7.6E-10 89.1 5.6 36 161-196 2-37 (501)
120 1mo9_A ORF3; nucleotide bindin 97.7 2.6E-05 8.9E-10 89.0 6.0 42 160-201 41-82 (523)
121 1dxl_A Dihydrolipoamide dehydr 97.7 2.3E-05 7.8E-10 88.0 5.3 41 161-201 5-45 (470)
122 2cul_A Glucose-inhibited divis 97.7 2.4E-05 8.2E-10 79.3 5.0 35 161-195 2-36 (232)
123 2qae_A Lipoamide, dihydrolipoy 97.7 1.9E-05 6.4E-10 88.8 4.6 40 162-201 2-41 (468)
124 3fbs_A Oxidoreductase; structu 97.7 2.3E-05 7.8E-10 81.5 4.5 35 162-196 2-36 (297)
125 2xve_A Flavin-containing monoo 97.7 2.7E-05 9.3E-10 87.5 5.3 40 163-202 3-48 (464)
126 2bry_A NEDD9 interacting prote 97.7 3.5E-05 1.2E-09 87.4 6.1 40 160-199 90-129 (497)
127 3c4a_A Probable tryptophan hyd 97.6 3E-05 1E-09 84.6 5.2 35 163-197 1-37 (381)
128 1trb_A Thioredoxin reductase; 97.6 1.8E-05 6E-10 83.6 3.2 40 161-201 4-43 (320)
129 1vdc_A NTR, NADPH dependent th 97.6 2.6E-05 9E-10 82.8 4.5 40 162-201 8-51 (333)
130 2a87_A TRXR, TR, thioredoxin r 97.6 2.9E-05 1E-09 82.8 4.8 41 160-201 12-52 (335)
131 1k0i_A P-hydroxybenzoate hydro 97.6 2.8E-05 9.4E-10 85.0 4.6 35 162-196 2-36 (394)
132 1zmd_A Dihydrolipoyl dehydroge 97.6 1.9E-05 6.5E-10 88.9 3.1 41 161-201 5-45 (474)
133 3dk9_A Grase, GR, glutathione 97.6 1.9E-05 6.6E-10 88.9 3.1 40 161-201 19-58 (478)
134 3ihm_A Styrene monooxygenase A 97.6 3.2E-05 1.1E-09 86.0 4.7 34 162-195 22-55 (430)
135 3c4n_A Uncharacterized protein 97.6 3.1E-05 1.1E-09 85.2 4.6 38 162-199 36-75 (405)
136 2yqu_A 2-oxoglutarate dehydrog 97.6 3E-05 1E-09 86.8 4.4 39 163-201 2-40 (455)
137 2rgh_A Alpha-glycerophosphate 97.6 4.4E-05 1.5E-09 88.1 5.7 38 162-199 32-69 (571)
138 3dgz_A Thioredoxin reductase 2 97.6 3.4E-05 1.2E-09 87.2 4.7 33 161-193 5-37 (488)
139 1zk7_A HGII, reductase, mercur 97.6 4.6E-05 1.6E-09 85.6 5.2 41 161-202 3-43 (467)
140 4b63_A L-ornithine N5 monooxyg 97.6 0.00016 5.3E-09 82.1 9.6 42 160-201 37-78 (501)
141 1v59_A Dihydrolipoamide dehydr 97.6 3.6E-05 1.2E-09 86.6 4.3 40 162-201 5-44 (478)
142 1fec_A Trypanothione reductase 97.5 3.5E-05 1.2E-09 87.2 4.0 40 162-201 3-51 (490)
143 2hqm_A GR, grase, glutathione 97.5 3E-05 1E-09 87.5 3.3 40 161-201 10-49 (479)
144 2a8x_A Dihydrolipoyl dehydroge 97.5 3E-05 1E-09 87.0 3.2 39 162-201 3-41 (464)
145 2r9z_A Glutathione amide reduc 97.5 3.7E-05 1.3E-09 86.3 3.9 39 162-201 4-42 (463)
146 1ps9_A 2,4-dienoyl-COA reducta 97.5 7.2E-05 2.4E-09 88.0 6.4 43 160-202 371-413 (671)
147 3ic9_A Dihydrolipoamide dehydr 97.5 4.3E-05 1.5E-09 86.5 4.1 39 162-201 8-46 (492)
148 1ges_A Glutathione reductase; 97.5 3.4E-05 1.2E-09 86.3 3.2 39 162-201 4-42 (450)
149 1ojt_A Surface protein; redox- 97.5 3.8E-05 1.3E-09 86.7 3.6 40 162-201 6-45 (482)
150 2ywl_A Thioredoxin reductase r 97.5 7.3E-05 2.5E-09 72.2 5.0 33 163-195 2-34 (180)
151 1fl2_A Alkyl hydroperoxide red 97.5 5.8E-05 2E-09 79.3 4.6 37 163-201 2-38 (310)
152 1lvl_A Dihydrolipoamide dehydr 97.5 4.2E-05 1.4E-09 85.8 3.6 40 162-202 5-44 (458)
153 3dgh_A TRXR-1, thioredoxin red 97.5 6.4E-05 2.2E-09 84.8 5.1 34 161-194 8-41 (483)
154 2weu_A Tryptophan 5-halogenase 97.5 0.0001 3.4E-09 83.7 6.6 34 162-195 2-38 (511)
155 2wdq_A Succinate dehydrogenase 97.5 5.3E-05 1.8E-09 87.7 4.2 39 162-200 7-45 (588)
156 1chu_A Protein (L-aspartate ox 97.5 6.6E-05 2.3E-09 86.0 4.9 38 162-200 8-45 (540)
157 3iwa_A FAD-dependent pyridine 97.5 6.3E-05 2.1E-09 84.6 4.5 37 162-198 3-41 (472)
158 1xdi_A RV3303C-LPDA; reductase 97.5 4.8E-05 1.6E-09 86.2 3.5 39 162-201 2-43 (499)
159 1lqt_A FPRA; NADP+ derivative, 97.4 5.4E-05 1.9E-09 84.9 3.8 42 161-202 2-50 (456)
160 2bs2_A Quinol-fumarate reducta 97.4 6.6E-05 2.3E-09 88.0 4.7 39 162-200 5-43 (660)
161 3kd9_A Coenzyme A disulfide re 97.4 8.6E-05 2.9E-09 82.9 5.4 38 161-198 2-41 (449)
162 2pyx_A Tryptophan halogenase; 97.4 0.00018 6.1E-09 82.1 8.1 34 162-195 7-52 (526)
163 3g5s_A Methylenetetrahydrofola 97.4 0.00012 4E-09 79.5 6.0 40 163-202 2-41 (443)
164 2h88_A Succinate dehydrogenase 97.4 6.4E-05 2.2E-09 87.4 4.2 40 161-200 17-56 (621)
165 1onf_A GR, grase, glutathione 97.4 6.3E-05 2.2E-09 85.3 4.1 39 162-201 2-40 (500)
166 1ebd_A E3BD, dihydrolipoamide 97.4 6.2E-05 2.1E-09 84.2 4.0 39 162-201 3-41 (455)
167 3pl8_A Pyranose 2-oxidase; sub 97.4 9.4E-05 3.2E-09 86.2 5.6 41 161-201 45-85 (623)
168 2e5v_A L-aspartate oxidase; ar 97.4 0.0001 3.5E-09 83.0 5.4 36 164-200 1-36 (472)
169 3s5w_A L-ornithine 5-monooxyge 97.4 6.7E-05 2.3E-09 83.9 3.8 39 161-199 29-72 (463)
170 2v3a_A Rubredoxin reductase; a 97.4 0.00075 2.6E-08 73.5 12.0 37 162-198 145-181 (384)
171 2eq6_A Pyruvate dehydrogenase 97.4 7E-05 2.4E-09 84.1 3.6 39 162-201 6-44 (464)
172 2wpf_A Trypanothione reductase 97.4 5.7E-05 2E-09 85.6 2.9 40 162-201 7-55 (495)
173 1y56_A Hypothetical protein PH 97.4 7.7E-05 2.6E-09 84.4 3.7 40 162-202 108-147 (493)
174 3oc4_A Oxidoreductase, pyridin 97.4 0.00011 3.9E-09 82.0 5.0 36 163-198 3-40 (452)
175 2zxi_A TRNA uridine 5-carboxym 97.4 0.00012 4.2E-09 84.5 5.3 39 161-199 26-65 (637)
176 3ics_A Coenzyme A-disulfide re 97.4 0.00012 4.1E-09 84.7 5.3 39 160-198 34-74 (588)
177 2gag_A Heterotetrameric sarcos 97.3 9.8E-05 3.4E-09 90.4 4.7 41 162-202 128-168 (965)
178 3h28_A Sulfide-quinone reducta 97.3 0.00012 4.1E-09 81.2 4.6 39 162-200 2-42 (430)
179 3fg2_P Putative rubredoxin red 97.3 0.00017 5.7E-09 79.3 5.6 37 163-199 2-40 (404)
180 1cjc_A Protein (adrenodoxin re 97.3 0.00013 4.5E-09 81.8 4.8 40 162-201 6-47 (460)
181 2e4g_A Tryptophan halogenase; 97.3 0.00016 5.5E-09 82.9 5.6 34 162-195 25-61 (550)
182 3cp8_A TRNA uridine 5-carboxym 97.3 0.00014 4.6E-09 84.3 4.9 40 160-199 19-59 (641)
183 3h8l_A NADH oxidase; membrane 97.3 9.4E-05 3.2E-09 81.4 3.3 36 163-198 2-40 (409)
184 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00016 5.4E-09 82.5 5.2 39 161-201 211-249 (521)
185 1kf6_A Fumarate reductase flav 97.3 0.00012 4.2E-09 84.9 4.1 39 162-200 5-45 (602)
186 3lxd_A FAD-dependent pyridine 97.3 0.00017 5.7E-09 79.6 4.9 39 161-199 8-48 (415)
187 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00018 6.2E-09 83.4 4.9 38 161-198 27-65 (651)
188 3gyx_A Adenylylsulfate reducta 97.2 0.00022 7.4E-09 83.6 5.3 37 162-198 22-64 (662)
189 2eq6_A Pyruvate dehydrogenase 97.2 0.0015 5.3E-08 73.0 12.1 37 162-198 169-205 (464)
190 2x8g_A Thioredoxin glutathione 97.2 0.00021 7.3E-09 82.8 5.0 34 161-194 106-139 (598)
191 1jnr_A Adenylylsulfate reducta 97.1 0.00028 9.6E-09 82.5 5.5 36 161-196 21-60 (643)
192 3ntd_A FAD-dependent pyridine 97.1 0.00026 8.9E-09 81.3 5.1 36 163-198 2-39 (565)
193 3klj_A NAD(FAD)-dependent dehy 97.1 0.00031 1E-08 76.9 5.1 39 160-198 7-45 (385)
194 3ef6_A Toluene 1,2-dioxygenase 97.1 0.00032 1.1E-08 77.2 5.3 37 163-199 3-41 (410)
195 2cdu_A NADPH oxidase; flavoenz 97.1 0.00029 9.9E-09 78.6 4.9 36 163-198 1-38 (452)
196 1nhp_A NADH peroxidase; oxidor 97.1 0.0014 4.7E-08 73.0 10.3 37 162-198 149-185 (447)
197 2yqu_A 2-oxoglutarate dehydrog 97.1 0.0045 1.6E-07 68.9 14.6 40 368-407 222-262 (455)
198 1nhp_A NADH peroxidase; oxidor 97.1 0.00031 1.1E-08 78.3 4.8 36 163-198 1-38 (447)
199 4b1b_A TRXR, thioredoxin reduc 97.1 0.00025 8.5E-09 81.1 3.9 34 162-195 42-75 (542)
200 1ges_A Glutathione reductase; 97.0 0.003 1E-07 70.3 12.1 36 162-197 167-202 (450)
201 1q1r_A Putidaredoxin reductase 97.0 0.00058 2E-08 75.8 6.2 37 162-198 4-42 (431)
202 3cgb_A Pyridine nucleotide-dis 97.0 0.00041 1.4E-08 78.1 4.9 37 162-198 36-74 (480)
203 1m6i_A Programmed cell death p 97.0 0.00036 1.2E-08 78.9 4.5 39 160-198 9-49 (493)
204 2r9z_A Glutathione amide reduc 97.0 0.0053 1.8E-07 68.6 14.0 36 162-197 166-201 (463)
205 2gqw_A Ferredoxin reductase; f 97.0 0.00045 1.5E-08 76.1 5.1 38 161-198 6-45 (408)
206 2bc0_A NADH oxidase; flavoprot 97.0 0.00042 1.4E-08 78.3 4.7 38 161-198 34-74 (490)
207 3sx6_A Sulfide-quinone reducta 96.9 0.0005 1.7E-08 76.4 4.9 35 162-196 4-41 (437)
208 1xhc_A NADH oxidase /nitrite r 96.9 0.00055 1.9E-08 74.3 5.1 35 162-197 8-42 (367)
209 3vrd_B FCCB subunit, flavocyto 96.9 0.00057 2E-08 74.7 5.0 35 162-196 2-38 (401)
210 2v3a_A Rubredoxin reductase; a 96.9 0.00062 2.1E-08 74.2 5.1 34 162-195 4-39 (384)
211 1v59_A Dihydrolipoamide dehydr 96.9 0.0052 1.8E-07 68.9 12.8 37 162-198 183-219 (478)
212 4g6h_A Rotenone-insensitive NA 96.9 0.0005 1.7E-08 78.0 4.4 39 158-196 38-76 (502)
213 4eqs_A Coenzyme A disulfide re 96.9 0.00053 1.8E-08 76.3 4.3 36 163-198 1-38 (437)
214 3ic9_A Dihydrolipoamide dehydr 96.8 0.0069 2.4E-07 68.3 12.8 37 162-198 174-210 (492)
215 1kdg_A CDH, cellobiose dehydro 96.8 0.00079 2.7E-08 77.1 5.0 36 161-196 6-41 (546)
216 3lxd_A FAD-dependent pyridine 96.8 0.0059 2E-07 67.1 11.9 36 162-197 152-187 (415)
217 3oc4_A Oxidoreductase, pyridin 96.8 0.0055 1.9E-07 68.2 11.8 36 162-197 147-182 (452)
218 2hqm_A GR, grase, glutathione 96.8 0.012 4E-07 66.1 14.4 36 162-197 185-220 (479)
219 3hyw_A Sulfide-quinone reducta 96.8 0.00086 3E-08 74.3 4.9 34 163-196 3-38 (430)
220 3fg2_P Putative rubredoxin red 96.7 0.007 2.4E-07 66.2 12.0 36 162-197 142-177 (404)
221 3ef6_A Toluene 1,2-dioxygenase 96.7 0.0041 1.4E-07 68.3 9.9 36 162-197 143-178 (410)
222 2cdu_A NADPH oxidase; flavoenz 96.7 0.0061 2.1E-07 67.8 11.1 36 162-197 149-184 (452)
223 3o0h_A Glutathione reductase; 96.6 0.014 4.9E-07 65.4 13.9 40 368-407 246-286 (484)
224 1zmd_A Dihydrolipoyl dehydroge 96.6 0.018 6E-07 64.5 14.5 37 162-198 178-214 (474)
225 3t37_A Probable dehydrogenase; 96.6 0.0011 3.6E-08 75.4 4.2 37 160-196 15-52 (526)
226 1xdi_A RV3303C-LPDA; reductase 96.6 0.017 5.8E-07 65.1 14.0 40 368-407 237-277 (499)
227 1zk7_A HGII, reductase, mercur 96.6 0.012 4.2E-07 65.6 12.6 40 368-407 230-269 (467)
228 1n4w_A CHOD, cholesterol oxida 96.5 0.0015 5.2E-08 74.0 4.8 38 161-198 4-41 (504)
229 1ju2_A HydroxynitrIle lyase; f 96.5 0.001 3.5E-08 76.0 3.2 37 161-198 25-61 (536)
230 3iwa_A FAD-dependent pyridine 96.5 0.012 4E-07 65.8 11.6 40 368-407 216-256 (472)
231 1onf_A GR, grase, glutathione 96.4 0.015 5.1E-07 65.7 12.0 36 162-197 176-211 (500)
232 2qae_A Lipoamide, dihydrolipoy 96.3 0.019 6.7E-07 64.0 12.4 36 162-197 174-209 (468)
233 1m6i_A Programmed cell death p 96.3 0.018 6E-07 64.9 11.8 40 368-407 240-280 (493)
234 1mo9_A ORF3; nucleotide bindin 96.3 0.017 5.7E-07 65.6 11.6 35 163-197 215-249 (523)
235 3q9t_A Choline dehydrogenase a 96.3 0.0022 7.4E-08 73.9 4.1 36 161-196 5-41 (577)
236 3urh_A Dihydrolipoyl dehydroge 96.2 0.036 1.2E-06 62.3 13.7 36 162-197 198-233 (491)
237 1coy_A Cholesterol oxidase; ox 96.1 0.0033 1.1E-07 71.2 4.8 37 160-196 9-45 (507)
238 3ntd_A FAD-dependent pyridine 96.1 0.024 8.1E-07 64.8 12.0 36 162-197 151-186 (565)
239 2wpf_A Trypanothione reductase 96.1 0.021 7.3E-07 64.3 11.4 36 162-197 191-229 (495)
240 1fec_A Trypanothione reductase 96.1 0.019 6.6E-07 64.6 10.9 36 162-197 187-225 (490)
241 3qvp_A Glucose oxidase; oxidor 96.0 0.0035 1.2E-07 72.2 4.2 35 161-195 18-53 (583)
242 3lad_A Dihydrolipoamide dehydr 95.9 0.036 1.2E-06 61.9 11.9 36 162-197 180-215 (476)
243 3fim_B ARYL-alcohol oxidase; A 95.9 0.0037 1.3E-07 71.8 3.7 36 162-197 2-38 (566)
244 1gpe_A Protein (glucose oxidas 95.9 0.0046 1.6E-07 71.4 4.4 37 161-197 23-60 (587)
245 2jbv_A Choline oxidase; alcoho 95.8 0.0053 1.8E-07 70.2 4.8 38 161-198 12-50 (546)
246 4b1b_A TRXR, thioredoxin reduc 95.6 0.053 1.8E-06 61.8 11.9 39 368-406 277-316 (542)
247 4dna_A Probable glutathione re 95.6 0.055 1.9E-06 60.2 11.8 35 162-196 170-204 (463)
248 4gcm_A TRXR, thioredoxin reduc 95.2 0.015 5.2E-07 60.8 5.3 36 162-197 145-180 (312)
249 2g1u_A Hypothetical protein TM 95.2 0.02 6.7E-07 53.7 5.3 40 156-195 13-52 (155)
250 3klj_A NAD(FAD)-dependent dehy 95.0 0.018 6.1E-07 62.7 5.2 37 162-198 146-182 (385)
251 1lvl_A Dihydrolipoamide dehydr 94.5 0.029 9.9E-07 62.5 5.3 37 162-198 171-207 (458)
252 3fwz_A Inner membrane protein 94.5 0.044 1.5E-06 50.4 5.7 35 161-195 6-40 (140)
253 1lss_A TRK system potassium up 94.4 0.037 1.3E-06 50.1 5.0 34 162-195 4-37 (140)
254 4a5l_A Thioredoxin reductase; 94.3 0.036 1.2E-06 57.7 5.3 35 161-195 151-185 (314)
255 1ebd_A E3BD, dihydrolipoamide 94.2 0.04 1.4E-06 61.2 5.5 37 162-198 170-206 (455)
256 1xhc_A NADH oxidase /nitrite r 94.1 0.041 1.4E-06 59.4 5.3 36 163-198 144-179 (367)
257 3llv_A Exopolyphosphatase-rela 94.0 0.05 1.7E-06 49.8 5.0 34 162-195 6-39 (141)
258 1id1_A Putative potassium chan 94.0 0.058 2E-06 50.3 5.5 35 161-195 2-36 (153)
259 2gqw_A Ferredoxin reductase; f 93.9 0.054 1.9E-06 59.3 5.8 37 162-198 145-181 (408)
260 3ic5_A Putative saccharopine d 93.6 0.057 2E-06 47.2 4.4 34 162-195 5-39 (118)
261 3lk7_A UDP-N-acetylmuramoylala 93.6 0.054 1.8E-06 60.3 5.2 35 161-195 8-42 (451)
262 3cgb_A Pyridine nucleotide-dis 93.3 0.06 2E-06 60.3 4.9 38 161-198 185-222 (480)
263 1q1r_A Putidaredoxin reductase 93.2 0.088 3E-06 58.0 6.2 37 162-198 149-185 (431)
264 2x5o_A UDP-N-acetylmuramoylala 93.2 0.055 1.9E-06 59.9 4.5 37 162-198 5-41 (439)
265 2bc0_A NADH oxidase; flavoprot 93.2 0.077 2.6E-06 59.5 5.6 37 162-198 194-230 (490)
266 3c85_A Putative glutathione-re 93.1 0.084 2.9E-06 50.7 5.1 36 160-195 37-73 (183)
267 1ojt_A Surface protein; redox- 93.1 0.07 2.4E-06 59.7 5.0 37 162-198 185-221 (482)
268 2a8x_A Dihydrolipoyl dehydroge 93.0 0.088 3E-06 58.5 5.7 37 162-198 171-207 (464)
269 3kd9_A Coenzyme A disulfide re 92.9 0.1 3.4E-06 57.8 6.0 37 162-198 148-184 (449)
270 2hmt_A YUAA protein; RCK, KTN, 92.9 0.082 2.8E-06 47.9 4.4 34 162-195 6-39 (144)
271 3d1c_A Flavin-containing putat 92.9 0.09 3.1E-06 56.0 5.4 36 162-197 166-201 (369)
272 2q0l_A TRXR, thioredoxin reduc 92.8 0.11 3.6E-06 54.0 5.6 36 162-197 143-178 (311)
273 4eqs_A Coenzyme A disulfide re 92.5 0.096 3.3E-06 57.9 5.1 37 162-198 147-183 (437)
274 1dxl_A Dihydrolipoamide dehydr 92.4 0.079 2.7E-06 58.9 4.3 37 162-198 177-213 (470)
275 3ado_A Lambda-crystallin; L-gu 92.3 0.11 3.8E-06 54.9 5.0 34 162-195 6-39 (319)
276 1fl2_A Alkyl hydroperoxide red 92.3 0.12 4.1E-06 53.6 5.2 36 162-197 144-179 (310)
277 4e12_A Diketoreductase; oxidor 92.3 0.13 4.5E-06 53.2 5.5 34 162-195 4-37 (283)
278 1vdc_A NTR, NADPH dependent th 92.0 0.14 4.7E-06 53.7 5.3 36 162-197 159-194 (333)
279 2xve_A Flavin-containing monoo 91.9 0.14 5E-06 56.9 5.6 37 161-197 196-232 (464)
280 2a87_A TRXR, TR, thioredoxin r 91.8 0.15 5.1E-06 53.7 5.3 36 162-197 155-190 (335)
281 1trb_A Thioredoxin reductase; 91.7 0.15 5.2E-06 53.0 5.3 36 162-197 145-180 (320)
282 1f0y_A HCDH, L-3-hydroxyacyl-C 91.7 0.17 5.9E-06 52.8 5.6 34 162-195 15-48 (302)
283 3gwf_A Cyclohexanone monooxyge 91.7 0.13 4.5E-06 58.5 5.0 36 161-196 177-212 (540)
284 4dio_A NAD(P) transhydrogenase 91.6 0.17 5.8E-06 55.1 5.6 35 161-195 189-223 (405)
285 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.15 5.3E-06 50.9 4.9 36 160-195 29-64 (223)
286 2q7v_A Thioredoxin reductase; 91.6 0.16 5.5E-06 53.1 5.3 36 162-197 152-187 (325)
287 3dk9_A Grase, GR, glutathione 91.5 0.17 5.8E-06 56.4 5.7 37 162-198 187-223 (478)
288 3l4b_C TRKA K+ channel protien 91.5 0.14 4.7E-06 50.7 4.4 33 163-195 1-33 (218)
289 3l8k_A Dihydrolipoyl dehydroge 91.5 0.19 6.6E-06 55.8 6.1 37 162-198 172-208 (466)
290 2dpo_A L-gulonate 3-dehydrogen 91.4 0.16 5.6E-06 53.7 5.0 34 162-195 6-39 (319)
291 1kyq_A Met8P, siroheme biosynt 91.3 0.12 4.2E-06 53.3 3.8 35 161-195 12-46 (274)
292 2zbw_A Thioredoxin reductase; 91.2 0.16 5.3E-06 53.3 4.8 36 162-197 152-187 (335)
293 3itj_A Thioredoxin reductase 1 91.1 0.19 6.5E-06 52.4 5.3 37 161-197 172-208 (338)
294 3uox_A Otemo; baeyer-villiger 91.1 0.15 5.1E-06 58.1 4.7 36 161-196 184-219 (545)
295 2gv8_A Monooxygenase; FMO, FAD 90.9 0.18 6.2E-06 55.6 5.1 37 161-197 211-248 (447)
296 3p2y_A Alanine dehydrogenase/p 90.9 0.17 5.9E-06 54.6 4.7 35 161-195 183-217 (381)
297 4ap3_A Steroid monooxygenase; 90.8 0.16 5.5E-06 57.9 4.7 36 161-196 190-225 (549)
298 3cty_A Thioredoxin reductase; 90.7 0.2 6.8E-06 52.2 4.9 35 162-196 155-189 (319)
299 3eag_A UDP-N-acetylmuramate:L- 90.7 0.21 7.4E-06 52.8 5.2 35 162-196 4-39 (326)
300 2raf_A Putative dinucleotide-b 90.7 0.26 8.9E-06 48.6 5.5 36 161-196 18-53 (209)
301 3i83_A 2-dehydropantoate 2-red 90.7 0.22 7.5E-06 52.5 5.3 33 163-195 3-35 (320)
302 3s5w_A L-ornithine 5-monooxyge 90.7 0.15 5.3E-06 56.3 4.2 37 161-197 226-264 (463)
303 3doj_A AT3G25530, dehydrogenas 90.7 0.24 8.1E-06 52.0 5.5 36 160-195 19-54 (310)
304 1zej_A HBD-9, 3-hydroxyacyl-CO 90.6 0.23 7.8E-06 51.9 5.2 34 161-195 11-44 (293)
305 1ks9_A KPA reductase;, 2-dehyd 90.6 0.24 8.3E-06 50.8 5.4 33 163-195 1-33 (291)
306 2ew2_A 2-dehydropantoate 2-red 90.5 0.24 8E-06 51.6 5.2 34 162-195 3-36 (316)
307 3ghy_A Ketopantoate reductase 90.4 0.23 7.8E-06 52.7 5.2 33 162-194 3-35 (335)
308 3zwc_A Peroxisomal bifunctiona 90.4 0.67 2.3E-05 54.5 9.6 36 160-195 314-349 (742)
309 3ics_A Coenzyme A-disulfide re 90.4 0.28 9.6E-06 56.2 6.2 37 162-198 187-223 (588)
310 3hn2_A 2-dehydropantoate 2-red 90.1 0.23 8E-06 52.1 4.8 33 163-195 3-35 (312)
311 3k6j_A Protein F01G10.3, confi 90.0 0.31 1.1E-05 54.1 5.9 36 161-196 53-88 (460)
312 3ab1_A Ferredoxin--NADP reduct 90.0 0.24 8.3E-06 52.6 5.0 36 162-197 163-198 (360)
313 2vdc_G Glutamate synthase [NAD 90.0 0.29 9.8E-06 54.5 5.7 37 161-197 263-300 (456)
314 2y0c_A BCEC, UDP-glucose dehyd 89.8 0.29 1E-05 54.7 5.5 35 161-195 7-41 (478)
315 1hyu_A AHPF, alkyl hydroperoxi 89.6 0.24 8.3E-06 56.0 4.8 36 162-197 355-390 (521)
316 1bg6_A N-(1-D-carboxylethyl)-L 89.6 0.31 1.1E-05 51.8 5.4 34 162-195 4-37 (359)
317 3r9u_A Thioredoxin reductase; 89.5 0.34 1.2E-05 49.9 5.5 36 162-197 147-182 (315)
318 1x13_A NAD(P) transhydrogenase 89.4 0.31 1.1E-05 53.2 5.3 35 161-195 171-205 (401)
319 3f8d_A Thioredoxin reductase ( 89.4 0.34 1.2E-05 50.1 5.4 37 162-198 154-190 (323)
320 2x8g_A Thioredoxin glutathione 89.3 0.28 9.6E-06 56.4 5.1 33 162-194 286-318 (598)
321 3g79_A NDP-N-acetyl-D-galactos 89.3 0.36 1.2E-05 53.9 5.7 36 161-196 17-54 (478)
322 1zcj_A Peroxisomal bifunctiona 89.1 0.34 1.2E-05 54.0 5.4 35 161-195 36-70 (463)
323 1l7d_A Nicotinamide nucleotide 89.0 0.38 1.3E-05 52.2 5.6 35 161-195 171-205 (384)
324 3oj0_A Glutr, glutamyl-tRNA re 88.8 0.18 6.2E-06 46.3 2.5 34 162-195 21-54 (144)
325 3pef_A 6-phosphogluconate dehy 88.8 0.37 1.3E-05 49.8 5.1 33 163-195 2-34 (287)
326 1lld_A L-lactate dehydrogenase 88.8 0.39 1.3E-05 50.4 5.3 34 162-195 7-42 (319)
327 3dtt_A NADP oxidoreductase; st 88.7 0.4 1.4E-05 48.4 5.2 36 160-195 17-52 (245)
328 3g0o_A 3-hydroxyisobutyrate de 88.7 0.4 1.4E-05 50.0 5.4 34 162-195 7-40 (303)
329 3hwr_A 2-dehydropantoate 2-red 88.6 0.38 1.3E-05 50.7 5.1 34 161-195 18-51 (318)
330 4ffl_A PYLC; amino acid, biosy 88.6 0.39 1.3E-05 51.3 5.3 35 162-196 1-35 (363)
331 2a9f_A Putative malic enzyme ( 88.5 0.34 1.2E-05 52.3 4.7 36 160-195 186-222 (398)
332 3gvi_A Malate dehydrogenase; N 88.5 0.45 1.5E-05 50.4 5.6 36 160-195 5-41 (324)
333 3gg2_A Sugar dehydrogenase, UD 88.5 0.38 1.3E-05 53.4 5.2 33 163-195 3-35 (450)
334 2hjr_A Malate dehydrogenase; m 88.4 0.46 1.6E-05 50.4 5.6 34 162-195 14-48 (328)
335 3pid_A UDP-glucose 6-dehydroge 88.3 0.4 1.4E-05 52.7 5.2 37 158-195 32-68 (432)
336 3ggo_A Prephenate dehydrogenas 88.3 0.51 1.7E-05 49.7 5.8 34 162-195 33-68 (314)
337 3dgz_A Thioredoxin reductase 2 88.2 0.44 1.5E-05 53.3 5.6 33 162-194 185-217 (488)
338 4dll_A 2-hydroxy-3-oxopropiona 88.2 0.47 1.6E-05 50.0 5.4 35 161-195 30-64 (320)
339 3lzw_A Ferredoxin--NADP reduct 88.1 0.45 1.5E-05 49.4 5.3 36 162-197 154-189 (332)
340 2h78_A Hibadh, 3-hydroxyisobut 88.1 0.43 1.5E-05 49.6 5.1 34 162-195 3-36 (302)
341 3k96_A Glycerol-3-phosphate de 88.1 0.45 1.5E-05 51.1 5.3 34 162-195 29-62 (356)
342 3qfa_A Thioredoxin reductase 1 88.1 0.45 1.5E-05 53.7 5.6 33 162-194 210-242 (519)
343 3mog_A Probable 3-hydroxybutyr 88.1 0.43 1.5E-05 53.4 5.3 34 162-195 5-38 (483)
344 1pjc_A Protein (L-alanine dehy 88.0 0.45 1.5E-05 51.1 5.3 34 162-195 167-200 (361)
345 1vl6_A Malate oxidoreductase; 88.0 0.39 1.3E-05 51.8 4.7 35 160-194 190-225 (388)
346 1pzg_A LDH, lactate dehydrogen 88.0 0.51 1.8E-05 50.0 5.7 34 162-195 9-43 (331)
347 2ewd_A Lactate dehydrogenase,; 87.9 0.43 1.5E-05 50.2 5.0 34 162-195 4-38 (317)
348 3fbs_A Oxidoreductase; structu 87.9 0.42 1.4E-05 48.7 4.8 36 565-602 258-293 (297)
349 3qha_A Putative oxidoreductase 87.8 0.41 1.4E-05 49.8 4.7 34 162-195 15-48 (296)
350 1cjc_A Protein (adrenodoxin re 87.7 0.43 1.5E-05 53.0 5.1 37 161-197 144-201 (460)
351 1z82_A Glycerol-3-phosphate de 87.6 0.5 1.7E-05 50.0 5.3 34 161-194 13-46 (335)
352 3vtf_A UDP-glucose 6-dehydroge 87.6 0.49 1.7E-05 52.2 5.3 36 160-195 19-54 (444)
353 1nyt_A Shikimate 5-dehydrogena 87.6 0.55 1.9E-05 48.2 5.4 33 162-194 119-151 (271)
354 4a7p_A UDP-glucose dehydrogena 87.5 0.56 1.9E-05 51.9 5.7 35 162-196 8-42 (446)
355 3g17_A Similar to 2-dehydropan 87.5 0.32 1.1E-05 50.6 3.6 33 163-195 3-35 (294)
356 2eez_A Alanine dehydrogenase; 87.4 0.52 1.8E-05 50.7 5.3 35 161-195 165-199 (369)
357 3pdu_A 3-hydroxyisobutyrate de 87.3 0.39 1.3E-05 49.6 4.2 33 163-195 2-34 (287)
358 2v6b_A L-LDH, L-lactate dehydr 87.2 0.53 1.8E-05 49.3 5.2 33 163-195 1-35 (304)
359 1mv8_A GMD, GDP-mannose 6-dehy 87.2 0.48 1.6E-05 52.3 5.0 33 163-195 1-33 (436)
360 4g65_A TRK system potassium up 87.2 0.28 9.5E-06 54.6 3.1 67 161-241 2-68 (461)
361 2vns_A Metalloreductase steap3 87.1 0.53 1.8E-05 46.5 4.8 35 161-195 27-61 (215)
362 3ego_A Probable 2-dehydropanto 87.1 0.55 1.9E-05 49.1 5.2 33 162-195 2-34 (307)
363 4e21_A 6-phosphogluconate dehy 87.0 0.58 2E-05 50.2 5.4 35 161-195 21-55 (358)
364 3dgh_A TRXR-1, thioredoxin red 86.9 0.62 2.1E-05 51.9 5.8 33 162-194 187-219 (483)
365 4huj_A Uncharacterized protein 86.8 0.33 1.1E-05 48.2 3.1 35 161-195 22-57 (220)
366 3tl2_A Malate dehydrogenase; c 86.8 0.61 2.1E-05 49.1 5.4 34 161-194 7-41 (315)
367 2wtb_A MFP2, fatty acid multif 86.8 1 3.6E-05 52.9 7.9 35 161-195 311-345 (725)
368 1txg_A Glycerol-3-phosphate de 86.7 0.48 1.6E-05 49.9 4.5 31 163-193 1-31 (335)
369 3gpi_A NAD-dependent epimerase 86.7 0.66 2.3E-05 47.4 5.5 35 161-195 2-36 (286)
370 3l9w_A Glutathione-regulated p 86.7 0.55 1.9E-05 51.5 5.1 34 162-195 4-37 (413)
371 3phh_A Shikimate dehydrogenase 86.6 0.69 2.4E-05 47.6 5.5 34 162-195 118-151 (269)
372 1t2d_A LDH-P, L-lactate dehydr 86.6 0.72 2.5E-05 48.7 5.8 34 162-195 4-38 (322)
373 2vhw_A Alanine dehydrogenase; 86.5 0.62 2.1E-05 50.4 5.3 35 161-195 167-201 (377)
374 1pjq_A CYSG, siroheme synthase 86.3 0.53 1.8E-05 52.3 4.8 34 161-194 11-44 (457)
375 3l6d_A Putative oxidoreductase 86.1 0.85 2.9E-05 47.6 6.0 35 161-195 8-42 (306)
376 3e8x_A Putative NAD-dependent 86.1 0.65 2.2E-05 46.0 4.9 36 160-195 19-55 (236)
377 4a9w_A Monooxygenase; baeyer-v 85.8 0.64 2.2E-05 48.6 4.9 34 161-195 162-195 (357)
378 2egg_A AROE, shikimate 5-dehyd 85.7 0.74 2.5E-05 48.0 5.3 34 162-195 141-175 (297)
379 1jay_A Coenzyme F420H2:NADP+ o 85.6 0.7 2.4E-05 45.1 4.8 31 164-194 2-33 (212)
380 2rir_A Dipicolinate synthase, 85.4 0.77 2.6E-05 47.8 5.3 35 161-195 156-190 (300)
381 3p7m_A Malate dehydrogenase; p 85.4 0.88 3E-05 48.0 5.7 36 160-195 3-39 (321)
382 2uyy_A N-PAC protein; long-cha 85.4 0.85 2.9E-05 47.7 5.6 34 162-195 30-63 (316)
383 1p77_A Shikimate 5-dehydrogena 85.3 0.59 2E-05 48.0 4.2 34 162-195 119-152 (272)
384 3qsg_A NAD-binding phosphogluc 85.3 0.64 2.2E-05 48.8 4.6 34 161-194 23-57 (312)
385 1guz_A Malate dehydrogenase; o 85.3 0.82 2.8E-05 47.9 5.4 33 163-195 1-35 (310)
386 1jw9_B Molybdopterin biosynthe 85.3 0.7 2.4E-05 46.9 4.7 34 162-195 31-65 (249)
387 2qrj_A Saccharopine dehydrogen 85.2 0.52 1.8E-05 51.0 3.8 41 161-201 213-258 (394)
388 1dlj_A UDP-glucose dehydrogena 85.1 0.63 2.2E-05 50.7 4.6 32 163-195 1-32 (402)
389 3d4o_A Dipicolinate synthase s 85.0 0.83 2.8E-05 47.4 5.2 35 161-195 154-188 (293)
390 2f1k_A Prephenate dehydrogenas 84.9 0.86 2.9E-05 46.6 5.2 33 163-195 1-33 (279)
391 1x0v_A GPD-C, GPDH-C, glycerol 84.6 0.53 1.8E-05 50.1 3.6 35 162-196 8-49 (354)
392 2zyd_A 6-phosphogluconate dehy 84.6 0.74 2.5E-05 51.5 4.9 36 160-195 13-48 (480)
393 1o94_A Tmadh, trimethylamine d 84.6 0.75 2.6E-05 54.2 5.2 36 162-198 528-565 (729)
394 2gag_A Heterotetrameric sarcos 84.5 0.48 1.6E-05 57.8 3.6 37 162-198 284-320 (965)
395 1ur5_A Malate dehydrogenase; o 84.4 0.96 3.3E-05 47.4 5.4 33 163-195 3-36 (309)
396 2rcy_A Pyrroline carboxylate r 84.4 0.76 2.6E-05 46.5 4.6 35 162-196 4-42 (262)
397 4ezb_A Uncharacterized conserv 84.3 0.75 2.6E-05 48.4 4.5 34 162-195 24-58 (317)
398 2pv7_A T-protein [includes: ch 84.3 0.87 3E-05 47.4 5.0 34 162-195 21-55 (298)
399 1yqg_A Pyrroline-5-carboxylate 84.3 0.79 2.7E-05 46.4 4.6 33 163-195 1-34 (263)
400 1hdo_A Biliverdin IX beta redu 84.1 1.1 3.6E-05 43.0 5.2 33 163-195 4-37 (206)
401 2gf2_A Hibadh, 3-hydroxyisobut 84.0 0.88 3E-05 46.9 4.9 32 164-195 2-33 (296)
402 1evy_A Glycerol-3-phosphate de 84.0 0.58 2E-05 50.1 3.6 32 164-195 17-48 (366)
403 3dfu_A Uncharacterized protein 83.9 0.41 1.4E-05 48.1 2.2 33 162-194 6-38 (232)
404 1a5z_A L-lactate dehydrogenase 83.8 0.82 2.8E-05 48.1 4.6 33 163-195 1-35 (319)
405 2hk9_A Shikimate dehydrogenase 83.8 0.76 2.6E-05 47.3 4.2 34 162-195 129-162 (275)
406 1lqt_A FPRA; NADP+ derivative, 83.8 0.88 3E-05 50.4 5.1 37 161-197 146-203 (456)
407 3cky_A 2-hydroxymethyl glutara 83.7 0.97 3.3E-05 46.7 5.1 34 162-195 4-37 (301)
408 2o3j_A UDP-glucose 6-dehydroge 83.7 0.83 2.8E-05 51.1 4.8 34 162-195 9-44 (481)
409 1vpd_A Tartronate semialdehyde 83.6 0.97 3.3E-05 46.7 5.0 33 163-195 6-38 (299)
410 3ond_A Adenosylhomocysteinase; 83.6 1.1 3.6E-05 50.0 5.5 35 161-195 264-298 (488)
411 2qyt_A 2-dehydropantoate 2-red 83.5 0.7 2.4E-05 48.1 3.9 31 163-193 9-45 (317)
412 4gwg_A 6-phosphogluconate dehy 83.5 1 3.4E-05 50.4 5.3 35 161-195 3-37 (484)
413 2g5c_A Prephenate dehydrogenas 83.4 1.1 3.8E-05 45.8 5.3 33 163-195 2-36 (281)
414 1leh_A Leucine dehydrogenase; 83.3 1.1 3.9E-05 48.0 5.5 34 161-194 172-205 (364)
415 3tri_A Pyrroline-5-carboxylate 83.3 1.1 3.8E-05 46.2 5.2 34 162-195 3-39 (280)
416 3ew7_A LMO0794 protein; Q8Y8U8 83.2 1.1 3.9E-05 43.4 5.1 33 163-195 1-34 (221)
417 1wdk_A Fatty oxidation complex 83.1 0.79 2.7E-05 53.9 4.5 35 161-195 313-347 (715)
418 3don_A Shikimate dehydrogenase 83.0 0.79 2.7E-05 47.3 4.0 34 162-195 117-151 (277)
419 3ius_A Uncharacterized conserv 83.0 0.95 3.2E-05 46.1 4.6 34 162-195 5-38 (286)
420 3c24_A Putative oxidoreductase 83.0 1.1 3.8E-05 46.1 5.1 34 162-195 11-45 (286)
421 2izz_A Pyrroline-5-carboxylate 82.9 0.99 3.4E-05 47.5 4.8 36 160-195 20-59 (322)
422 3ktd_A Prephenate dehydrogenas 82.9 1.2 4.1E-05 47.4 5.4 34 162-195 8-41 (341)
423 1w4x_A Phenylacetone monooxyge 82.9 0.84 2.9E-05 51.7 4.6 35 161-195 185-219 (542)
424 1gte_A Dihydropyrimidine dehyd 82.9 1 3.5E-05 55.3 5.5 34 162-195 332-366 (1025)
425 1y6j_A L-lactate dehydrogenase 82.9 1.2 4.2E-05 46.8 5.5 34 162-195 7-42 (318)
426 3pwz_A Shikimate dehydrogenase 82.8 1.3 4.5E-05 45.5 5.5 35 161-195 119-154 (272)
427 2cvz_A Dehydrogenase, 3-hydrox 82.7 0.97 3.3E-05 46.3 4.6 32 163-195 2-33 (289)
428 1hyh_A L-hicdh, L-2-hydroxyiso 82.6 0.97 3.3E-05 47.3 4.5 33 163-195 2-36 (309)
429 3tnl_A Shikimate dehydrogenase 82.5 1.2 4.3E-05 46.7 5.3 34 161-194 153-187 (315)
430 3fbt_A Chorismate mutase and s 82.5 1.2 4.1E-05 46.0 5.2 35 161-195 121-156 (282)
431 3pqe_A L-LDH, L-lactate dehydr 82.5 1.2 4E-05 47.2 5.1 34 162-195 5-40 (326)
432 1edz_A 5,10-methylenetetrahydr 82.5 1.2 4E-05 47.0 5.0 35 160-194 175-210 (320)
433 3jyo_A Quinate/shikimate dehyd 82.4 1.4 4.6E-05 45.7 5.5 35 161-195 126-161 (283)
434 2aef_A Calcium-gated potassium 82.4 0.53 1.8E-05 46.9 2.3 33 162-195 9-41 (234)
435 2pzm_A Putative nucleotide sug 82.4 1.4 4.8E-05 46.1 5.8 38 158-195 16-54 (330)
436 2q3e_A UDP-glucose 6-dehydroge 82.4 1 3.4E-05 50.2 4.8 34 162-195 5-40 (467)
437 3gvp_A Adenosylhomocysteinase 82.4 1.1 3.7E-05 49.0 4.9 35 161-195 219-253 (435)
438 4gbj_A 6-phosphogluconate dehy 82.3 0.98 3.4E-05 47.0 4.4 34 162-195 5-38 (297)
439 1yb4_A Tartronic semialdehyde 82.2 0.87 3E-05 46.9 3.9 32 163-195 4-35 (295)
440 1yj8_A Glycerol-3-phosphate de 82.1 0.86 2.9E-05 49.0 4.0 34 163-196 22-62 (375)
441 2i6t_A Ubiquitin-conjugating e 82.1 1.2 3.9E-05 46.7 4.8 34 162-195 14-49 (303)
442 2p4q_A 6-phosphogluconate dehy 82.0 1.2 4.3E-05 49.8 5.4 35 161-195 9-43 (497)
443 1nvt_A Shikimate 5'-dehydrogen 81.9 1.1 3.8E-05 46.3 4.6 32 162-194 128-159 (287)
444 1np3_A Ketol-acid reductoisome 81.9 1.3 4.5E-05 46.9 5.3 34 162-195 16-49 (338)
445 4b4o_A Epimerase family protei 81.8 1.4 4.9E-05 45.2 5.5 33 163-195 1-34 (298)
446 3h2s_A Putative NADH-flavin re 81.8 1.3 4.6E-05 43.1 5.0 33 163-195 1-34 (224)
447 3ldh_A Lactate dehydrogenase; 81.7 1.3 4.3E-05 47.0 5.0 35 161-195 20-56 (330)
448 4hv4_A UDP-N-acetylmuramate--L 81.4 1.1 3.7E-05 50.3 4.6 35 161-195 21-56 (494)
449 2ahr_A Putative pyrroline carb 81.4 1.3 4.4E-05 44.7 4.8 34 162-195 3-36 (259)
450 3k30_A Histamine dehydrogenase 81.3 1.1 3.8E-05 52.3 4.9 37 162-198 523-561 (690)
451 3vku_A L-LDH, L-lactate dehydr 81.3 1.3 4.6E-05 46.7 5.1 34 161-194 8-43 (326)
452 3gt0_A Pyrroline-5-carboxylate 81.2 1.5 5E-05 44.1 5.2 33 163-195 3-39 (247)
453 3u62_A Shikimate dehydrogenase 81.2 1.4 4.8E-05 44.8 5.0 34 161-195 108-142 (253)
454 2ywl_A Thioredoxin reductase r 81.2 1.8 6.2E-05 40.7 5.6 38 368-407 70-108 (180)
455 3o8q_A Shikimate 5-dehydrogena 81.2 1.4 4.9E-05 45.5 5.1 35 161-195 125-160 (281)
456 4id9_A Short-chain dehydrogena 81.1 1.2 4.3E-05 46.6 4.8 37 160-196 17-54 (347)
457 1i36_A Conserved hypothetical 81.1 1.2 4.1E-05 45.1 4.5 30 164-193 2-31 (264)
458 1oju_A MDH, malate dehydrogena 81.1 1.2 4.2E-05 46.3 4.6 33 163-195 1-35 (294)
459 3ce6_A Adenosylhomocysteinase; 81.1 1.5 5E-05 49.1 5.5 35 161-195 273-307 (494)
460 2pgd_A 6-phosphogluconate dehy 80.9 1.3 4.6E-05 49.4 5.2 33 163-195 3-35 (482)
461 3nep_X Malate dehydrogenase; h 80.8 1.3 4.5E-05 46.6 4.7 33 163-195 1-35 (314)
462 2dbq_A Glyoxylate reductase; D 80.6 1.7 6E-05 45.9 5.7 36 160-195 148-183 (334)
463 2iz1_A 6-phosphogluconate dehy 80.5 1.5 5E-05 48.9 5.3 34 162-195 5-38 (474)
464 4aj2_A L-lactate dehydrogenase 80.4 1.8 6E-05 45.9 5.6 36 160-195 17-54 (331)
465 3c7a_A Octopine dehydrogenase; 80.4 0.98 3.3E-05 49.0 3.7 30 163-192 3-33 (404)
466 2d5c_A AROE, shikimate 5-dehyd 80.3 1.6 5.5E-05 44.3 5.1 32 164-195 118-149 (263)
467 1gpj_A Glutamyl-tRNA reductase 80.1 1.4 4.7E-05 48.1 4.8 35 161-195 166-201 (404)
468 3t4e_A Quinate/shikimate dehyd 80.1 1.7 5.8E-05 45.6 5.3 34 161-194 147-181 (312)
469 3fi9_A Malate dehydrogenase; s 79.9 1.8 6E-05 46.1 5.4 35 160-194 6-43 (343)
470 3b1f_A Putative prephenate deh 79.7 1.5 5.2E-05 45.0 4.8 34 161-194 5-40 (290)
471 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.6 1.5 5E-05 49.0 4.9 33 163-195 2-34 (478)
472 4g6h_A Rotenone-insensitive NA 79.4 1.2 4.2E-05 49.9 4.2 36 163-198 218-267 (502)
473 3obb_A Probable 3-hydroxyisobu 79.3 1.8 6E-05 45.2 5.1 34 162-195 3-36 (300)
474 3d1l_A Putative NADP oxidoredu 79.2 1.5 5E-05 44.5 4.4 33 162-194 10-43 (266)
475 3r6d_A NAD-dependent epimerase 78.9 2.4 8.2E-05 41.3 5.8 34 163-196 6-41 (221)
476 1npy_A Hypothetical shikimate 78.9 1.9 6.6E-05 44.2 5.2 33 162-194 119-152 (271)
477 3h9u_A Adenosylhomocysteinase; 78.9 2 6.8E-05 47.1 5.5 35 161-195 210-244 (436)
478 1lu9_A Methylene tetrahydromet 78.8 1.9 6.6E-05 44.3 5.2 34 161-194 118-152 (287)
479 3d0o_A L-LDH 1, L-lactate dehy 78.8 1.8 6.1E-05 45.5 5.0 34 161-194 5-40 (317)
480 3vps_A TUNA, NAD-dependent epi 78.6 2 6.8E-05 44.2 5.3 36 161-196 6-42 (321)
481 3q2o_A Phosphoribosylaminoimid 78.5 2 7E-05 46.2 5.5 36 161-196 13-48 (389)
482 3ojo_A CAP5O; rossmann fold, c 78.3 1.8 6.2E-05 47.5 5.0 34 162-195 11-44 (431)
483 2z1m_A GDP-D-mannose dehydrata 78.2 2.2 7.4E-05 44.5 5.5 34 162-195 3-37 (345)
484 1zud_1 Adenylyltransferase THI 78.2 2.1 7.3E-05 43.3 5.2 33 162-194 28-61 (251)
485 1ldn_A L-lactate dehydrogenase 78.2 1.9 6.3E-05 45.3 4.9 34 162-195 6-41 (316)
486 3ngx_A Bifunctional protein fo 78.2 2.4 8.3E-05 43.4 5.6 34 161-194 149-183 (276)
487 4a26_A Putative C-1-tetrahydro 78.1 2.3 7.9E-05 44.2 5.5 34 161-194 164-198 (300)
488 2gcg_A Glyoxylate reductase/hy 78.1 1.8 6.3E-05 45.7 4.9 36 160-195 153-188 (330)
489 3dhn_A NAD-dependent epimerase 78.1 1.9 6.4E-05 42.1 4.7 34 162-195 4-38 (227)
490 3ba1_A HPPR, hydroxyphenylpyru 77.9 2.2 7.4E-05 45.3 5.4 37 160-196 162-198 (333)
491 1ff9_A Saccharopine reductase; 77.8 1.8 6.3E-05 47.8 4.9 34 162-195 3-36 (450)
492 2d0i_A Dehydrogenase; structur 77.7 2.2 7.5E-05 45.2 5.3 36 160-195 144-179 (333)
493 3n58_A Adenosylhomocysteinase; 77.4 1.9 6.6E-05 47.3 4.8 35 161-195 246-280 (464)
494 1a4i_A Methylenetetrahydrofola 77.4 2.6 8.8E-05 43.8 5.6 34 161-194 164-198 (301)
495 1y1p_A ARII, aldehyde reductas 77.3 2.8 9.5E-05 43.5 6.0 35 160-194 9-44 (342)
496 3rui_A Ubiquitin-like modifier 77.1 2.4 8.3E-05 44.9 5.4 34 161-194 33-67 (340)
497 3h8v_A Ubiquitin-like modifier 77.0 1.8 6.2E-05 44.9 4.3 34 161-194 35-69 (292)
498 3o38_A Short chain dehydrogena 76.6 3 0.0001 42.0 5.9 36 160-195 20-57 (266)
499 3ek2_A Enoyl-(acyl-carrier-pro 76.6 2.2 7.4E-05 43.0 4.8 36 160-195 12-50 (271)
500 4gx0_A TRKA domain protein; me 76.5 2.1 7.1E-05 48.7 5.1 35 163-197 349-383 (565)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=5.9e-68 Score=626.46 Aligned_cols=529 Identities=41% Similarity=0.702 Sum_probs=430.2
Q ss_pred HHHHHHcCCCCCCCCHHHHhccccCccCcc---ccchhHHHHHHHHHHhhhccccCCCHHHHhhhccchhH---HHHHHH
Q 004458 61 AMIAFSLGFPIDALLEEEIRAGVVGVLGGK---EQNDYIVVRNHILARWRGNVRVWLTKGQIKETVSSEYE---HLMNSA 134 (752)
Q Consensus 61 a~~a~~~~~p~~~~~~~E~~~~~~~~~~~~---~~~~yl~irn~i~~~w~~np~~~~t~~~~~~~~~~~~~---~l~~~~ 134 (752)
.-+|+++|||+|+|+++| +.+||++.+. .++.||+|||+||++|+.||..+||.++++.++..+.. ..+..+
T Consensus 4 ~~aa~~~~l~~~~l~~~E--~~~~~~~~~~~~~~~~~yl~irn~~~~~w~~~~~~~~~~~~~~~~~~r~~~~~~~~i~~~ 81 (662)
T 2z3y_A 4 EGAAFQSRLPHDRMTSQE--AACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRV 81 (662)
T ss_dssp HHHHHHTTCCTTSCCHHH--HHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHSCTTGGGCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCHHH--HHHhHHHHcCchHHHHHHHHHHHHHHHHHHHCCCcccCHHHHHHhcCCCccCChHHHHHH
Confidence 348999999999999999 6899996554 45799999999999999999999999999999876643 578889
Q ss_pred HHHHHHccccccccCCCCCCCCCCCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEE
Q 004458 135 YDFLLYNGYINFGVAPSFTANMPEEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAA 214 (752)
Q Consensus 135 ~~~l~~~g~in~G~~~~~~~~~~~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~ 214 (752)
..|+.++++||+|+.+... .+.....++|+|||||++||+||++|++.|++|+|+|+++++||++++++..+ +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~----~~ 155 (662)
T 2z3y_A 82 HSYLERHGLINFGIYKRIK--PLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGN----YV 155 (662)
T ss_dssp HHHHHHTTSSSCSSCBCSS--CCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETT----EE
T ss_pred HHHHHHHHHHhcCCccccC--CCcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccC----ch
Confidence 9999999999999876432 12224578999999999999999999999999999999999999999998765 79
Q ss_pred EeccceeEcCCCccHHHHHHHHcCCCcccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHH-------------
Q 004458 215 VDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELR------------- 281 (752)
Q Consensus 215 ~d~Ga~~i~~~~~n~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~------------- 281 (752)
+|+|++++++..+|++..+.+++|++...+...+.++..+|..++...+......++.++.....+.
T Consensus 156 ~~~G~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (662)
T 2z3y_A 156 ADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPV 235 (662)
T ss_dssp EESSCCEECCSBTCHHHHHHHHHTCCEEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEEC
T ss_pred hhcCcEEEeCCCCchHHHHHHHhCcchhcccccceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCC
Confidence 9999999999888899999999999888777667777778876544332222222222111110000
Q ss_pred ----------------------------------------------HHhcCCCCC----------------C--------
Q 004458 282 ----------------------------------------------KIKGGFAND----------------V-------- 291 (752)
Q Consensus 282 ----------------------------------------------~~~~~~~~~----------------~-------- 291 (752)
..+..+... .
T Consensus 236 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~ 315 (662)
T 2z3y_A 236 SLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRD 315 (662)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhh
Confidence 000111000 0
Q ss_pred ---CHHHHHHH----------HHHHHH-----hhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCcee
Q 004458 292 ---SLGSVLET----------LRQLYA-----VARSTEERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCF 353 (752)
Q Consensus 292 ---sl~e~l~~----------l~~~~~-----~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~ 353 (752)
.+.++... +..+.. ...++.++.+++|++.++++.++..++.++...|.+++.+.+.|.++.
T Consensus 316 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~ 395 (662)
T 2z3y_A 316 LTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLT 395 (662)
T ss_dssp HTTTHHHHHHHTHHHHHHHHHHHHHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEE
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHHhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceee
Confidence 00000000 000000 013566677888988888998888899999999988776777888999
Q ss_pred cCCCHHHHHHHHHcCCcEEcCceEEEEEecCCcEEEEE-C------CEEEEecEEEEcCChhhHhh--ccccCCCCCcHH
Q 004458 354 LAGGNWRLIKALCEGVPIFYEKTVNTIKYGNEGVEVIA-G------DQMFQADMVLCTVPLGVLKE--KTIKFEPELPQR 424 (752)
Q Consensus 354 ~~gG~~~L~~aLa~gl~I~ln~~V~~I~~~~~gv~V~~-~------g~~~~AD~VV~AvPl~vLk~--~~i~f~P~Lp~~ 424 (752)
++||+++|+++|+++++|++|++|++|.+++++|+|++ + +++++||+||||+|+++|++ ..+.|.|+||++
T Consensus 396 ~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~ 475 (662)
T 2z3y_A 396 VRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEW 475 (662)
T ss_dssp ETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHH
T ss_pred ecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHH
Confidence 99999999999999999999999999999999999875 3 57899999999999999997 347899999999
Q ss_pred HHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeeccccCCCcEEEEEeccchhhhhccCCHHHH
Q 004458 425 KVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYHTVSGGPVLNALVAGEAAKTFESMDPSFL 504 (752)
Q Consensus 425 k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel 504 (752)
+.++|++++|++++||+|.|+++||+.+.+.||++.+....++.++.+++.. +.++|++|+.|+.+..+..++++++
T Consensus 476 k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~ 552 (662)
T 2z3y_A 476 KTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVI 552 (662)
T ss_dssp HHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHH
T ss_pred HHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHH
Confidence 9999999999999999999999999987788998876555556666666543 5578999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCCchHHhhcccC------------CcEEEecc
Q 004458 505 LHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGSDYDILAESVG------------SRLFFAGE 572 (752)
Q Consensus 505 ~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~------------~~L~fAGe 572 (752)
++.++++|+++||.. ..++|..+.+++|.++||+.|+|+++.||+...+++.+++|+. +|||||||
T Consensus 553 ~~~~l~~L~~~~g~~--~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe 630 (662)
T 2z3y_A 553 VGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGE 630 (662)
T ss_dssp HHHHHHHHHHHHCTT--SSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSG
T ss_pred HHHHHHHHHHHhCCc--ccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEec
Confidence 999999999999864 3568999999999999999999999999998888898988863 58999999
Q ss_pred cccCcCCcchHHHHHHHHHHHHHHHHHhhc
Q 004458 573 ATTRQYPATMHGAYLSGLREASRILRATRV 602 (752)
Q Consensus 573 ~ts~~~~g~veGAl~SG~rAA~~Il~~l~~ 602 (752)
||+..++||||||+.||.|||.+|++.+.+
T Consensus 631 ~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 631 HTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp GGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 999888999999999999999999998854
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=4.1e-64 Score=601.89 Aligned_cols=531 Identities=41% Similarity=0.705 Sum_probs=425.6
Q ss_pred HHHHHHHcCCCCCCCCHHHHhccccCccCcc---ccchhHHHHHHHHHHhhhccccCCCHHHHhhhccchh---HHHHHH
Q 004458 60 EAMIAFSLGFPIDALLEEEIRAGVVGVLGGK---EQNDYIVVRNHILARWRGNVRVWLTKGQIKETVSSEY---EHLMNS 133 (752)
Q Consensus 60 ~a~~a~~~~~p~~~~~~~E~~~~~~~~~~~~---~~~~yl~irn~i~~~w~~np~~~~t~~~~~~~~~~~~---~~l~~~ 133 (752)
..-+|+++|+|+|.||+.| +.+|+++.+. .++.||+|||+|+|+|..||..+++...++.++.... ...+..
T Consensus 174 ~~~aa~~~r~p~~~~~~~e--~~~f~~~~~~~~~~~~~~~~~rn~i~~~w~~~P~~a~~~~~~~~~~~r~~~~~p~~i~~ 251 (852)
T 2xag_A 174 VEGAAFQSRLPHDRMTSQE--AACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHR 251 (852)
T ss_dssp HHHHHHTTTCCTTSCCHHH--HHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHCCTTTTSCHHHHHH
T ss_pred HHHHHHHhcCCCcccChHH--HHHHHHHHHhhhhhcCeeeEeecchhHHHhcCCHHHhhHHHHHHhCCCcccCCcHHHHH
Confidence 3448899999999999999 6889996443 5789999999999999999999999888888887653 357888
Q ss_pred HHHHHHHccccccccCCCCCCCCCCCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceE
Q 004458 134 AYDFLLYNGYINFGVAPSFTANMPEEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFA 213 (752)
Q Consensus 134 ~~~~l~~~g~in~G~~~~~~~~~~~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~ 213 (752)
+..|+.++++||+|+.+.... +.....++|+|||||++||+||++|++.|++|+|||+++++||++.+++..+ +
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~----~ 325 (852)
T 2xag_A 252 VHSYLERHGLINFGIYKRIKP--LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGN----Y 325 (852)
T ss_dssp HHHHHHHTTSSSCSSCBCSSC--CCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEETT----E
T ss_pred HHHHHHHHHHHhcCcccccCC--cccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecccc----c
Confidence 999999999999998754321 1224578999999999999999999999999999999999999999999865 8
Q ss_pred EEeccceeEcCCCccHHHHHHHHcCCCcccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhcC---CCCC
Q 004458 214 AVDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGG---FAND 290 (752)
Q Consensus 214 ~~d~Ga~~i~~~~~n~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~---~~~~ 290 (752)
.+|+|++++++..+|++..+.+++|++...+...+.++..+|..++..........++.++.....+...... ...+
T Consensus 326 ~~~~G~~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~ 405 (852)
T 2xag_A 326 VADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKP 405 (852)
T ss_dssp EEESSCCEECCSBTCHHHHHHHHTTCCEEECCCCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCEETTEE
T ss_pred chhcCceEecCCCCchHHHHHHHhCCchhhccccceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhhhhhhcccCCC
Confidence 9999999999988889999999999988877767777878887655433222222222222111111100000 0001
Q ss_pred CCHHHHHH------------------------------------------------------------------------
Q 004458 291 VSLGSVLE------------------------------------------------------------------------ 298 (752)
Q Consensus 291 ~sl~e~l~------------------------------------------------------------------------ 298 (752)
.++++.++
T Consensus 406 ~slg~~~e~v~~~~er~~~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~ 485 (852)
T 2xag_A 406 VSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHR 485 (852)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhhhhhhhcchhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhh
Confidence 11111110
Q ss_pred ----HHHHHHH----------------------hhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCce
Q 004458 299 ----TLRQLYA----------------------VARSTEERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHC 352 (752)
Q Consensus 299 ----~l~~~~~----------------------~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~ 352 (752)
.+..+.. ...+..++.++.|++.++++.++..++.+++..|.+.+.+.+.|.++
T Consensus 486 ~l~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~ 565 (852)
T 2xag_A 486 DLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHL 565 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCE
T ss_pred hHHHHHHHHhhhhhhhhhHHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceE
Confidence 0000000 01233455677788888888888888888888898776677788899
Q ss_pred ecCCCHHHHHHHHHcCCcEEcCceEEEEEecCCcEEEEE-C------CEEEEecEEEEcCChhhHhh--ccccCCCCCcH
Q 004458 353 FLAGGNWRLIKALCEGVPIFYEKTVNTIKYGNEGVEVIA-G------DQMFQADMVLCTVPLGVLKE--KTIKFEPELPQ 423 (752)
Q Consensus 353 ~~~gG~~~L~~aLa~gl~I~ln~~V~~I~~~~~gv~V~~-~------g~~~~AD~VV~AvPl~vLk~--~~i~f~P~Lp~ 423 (752)
.++||+++|+++|+++++|++|++|++|.+++++|+|++ + +++++||+||||+|+++|++ ..+.|.|+||+
T Consensus 566 ~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~ 645 (852)
T 2xag_A 566 TVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPE 645 (852)
T ss_dssp EETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCH
T ss_pred EecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCH
Confidence 999999999999999999999999999999999999875 3 57899999999999999997 34789999999
Q ss_pred HHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeeccccCCCcEEEEEeccchhhhhccCCHHH
Q 004458 424 RKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYHTVSGGPVLNALVAGEAAKTFESMDPSF 503 (752)
Q Consensus 424 ~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~~~g~~vL~~~~~g~~a~~~~~lsdee 503 (752)
++.++|++++|++++||+|.|+++||+.+...||++......++.++.+|+.. +.++|++|+.|+.+..+..+++++
T Consensus 646 ~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdee 722 (852)
T 2xag_A 646 WKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDV 722 (852)
T ss_dssp HHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHH
T ss_pred HHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHH
Confidence 99999999999999999999999999987788998866544444444555543 456899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCCchHHhhcccC------------CcEEEec
Q 004458 504 LLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGSDYDILAESVG------------SRLFFAG 571 (752)
Q Consensus 504 l~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~------------~~L~fAG 571 (752)
+++.++++|+++||.. ..++|..+.+++|.++||+.|+|+++.||+...+++.+++|+. +||||||
T Consensus 723 l~~~~l~~L~~ifG~~--~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAG 800 (852)
T 2xag_A 723 IVGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAG 800 (852)
T ss_dssp HHHHHHHHHHHHHCTT--TCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECS
T ss_pred HHHHHHHHHHHHhCcc--ccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEe
Confidence 9999999999999864 3568999999999999999999999999998888998988762 5899999
Q ss_pred ccccCcCCcchHHHHHHHHHHHHHHHHHhhcc
Q 004458 572 EATTRQYPATMHGAYLSGLREASRILRATRVQ 603 (752)
Q Consensus 572 e~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~ 603 (752)
|||+..|+||||||+.||.|||.+|++.+...
T Consensus 801 E~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~ 832 (852)
T 2xag_A 801 EHTIRNYPATVHGALLSGLREAGRIADQFLGA 832 (852)
T ss_dssp GGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99998889999999999999999999998653
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=3e-61 Score=573.98 Aligned_cols=521 Identities=37% Similarity=0.626 Sum_probs=425.9
Q ss_pred CCCCCCCHHHHhccccCccCccccchhHHHHHHHHHHhhhccccCCCHHHHhhhccch------hHHHHHHHHHHHHHcc
Q 004458 69 FPIDALLEEEIRAGVVGVLGGKEQNDYIVVRNHILARWRGNVRVWLTKGQIKETVSSE------YEHLMNSAYDFLLYNG 142 (752)
Q Consensus 69 ~p~~~~~~~E~~~~~~~~~~~~~~~~yl~irn~i~~~w~~np~~~~t~~~~~~~~~~~------~~~l~~~~~~~l~~~g 142 (752)
+-||.|+.+| ...||++.. +++.||+|||+||++|..||..++|.+.+...+..+ ....+..+..|+.++|
T Consensus 238 ~~p~~~~~~e--~~~fp~~~~-~~~~yl~irn~il~~w~~np~~~l~~~~~~~~~~~r~~~~i~~~~~~~~~~~~~~~~~ 314 (776)
T 4gut_A 238 VRPDVMELDE--LYEFPEYSR-DPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKG 314 (776)
T ss_dssp BCTTSCCHHH--HHHCGGGSS-CCHHHHHHHHHHHHHHHHCTTSCCCHHHHGGGCCCSSTHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcCChHH--HHhChHHHh-cCceeeeehHHHHHHHHHCCceeeeHHHhhhhcccccccccccHHHHHHHHHHHHHhh
Confidence 3459999999 678999875 568999999999999999999999999998877543 3456788999999999
Q ss_pred ccccccCCCCC--CCCCCCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccce
Q 004458 143 YINFGVAPSFT--ANMPEEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGS 220 (752)
Q Consensus 143 ~in~G~~~~~~--~~~~~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~ 220 (752)
++|+|+..... ...+.....++|+|||||++||+||++|++.|++|+|+|+++++|||++|.+..+ ++.+|+|++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~---G~~vd~Ga~ 391 (776)
T 4gut_A 315 LINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFK---GVTVGRGAQ 391 (776)
T ss_dssp SSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCST---TCCEESSCC
T ss_pred hhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccC---CeEeccCCe
Confidence 99999865322 2223335578999999999999999999999999999999999999999987643 278999999
Q ss_pred eEcCCCccHHHHHHHHcCCCcccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q 004458 221 VITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFANDVSLGSVLETL 300 (752)
Q Consensus 221 ~i~~~~~n~l~~L~~~LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l 300 (752)
++++...|++..+++++|++.........++..+|..............+..+++....++. ......+.++.+.+...
T Consensus 392 ~i~G~~~np~~~l~~~lGl~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~~d~sl~~~~~~~ 470 (776)
T 4gut_A 392 IVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRK-DKTQLQDVPLGEKIEEI 470 (776)
T ss_dssp EEECCTTCHHHHHHHHHTCCCEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHGG-GCCGGGCCBHHHHHHHH
T ss_pred EEeCCccChHHHHHHHhCCcccccccccceEccCCcccchhHHHHHHHHHHHHHHHHHHHhh-cccccccccHHHHHHHH
Confidence 99999999999999999999887777777887888776655555555566666665555443 11123456666655432
Q ss_pred H----HHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCc-cCCCCceecCCCHHHHHHHHHcCCcEEcCc
Q 004458 301 R----QLYAVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQDDPY-EMGGDHCFLAGGNWRLIKALCEGVPIFYEK 375 (752)
Q Consensus 301 ~----~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~-~~~g~~~~~~gG~~~L~~aLa~gl~I~ln~ 375 (752)
. ..........+...+.+....+++..+..+..++...|+....+ ..+|.+..+.+|++.++++|+++++|++|+
T Consensus 471 ~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~gl~I~l~t 550 (776)
T 4gut_A 471 YKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKS 550 (776)
T ss_dssp HHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTTSCEESSC
T ss_pred HHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhCCcEEcCC
Confidence 1 11112233344445555666666667777777777777654333 356777889999999999999999999999
Q ss_pred eEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccC--
Q 004458 376 TVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEE-- 452 (752)
Q Consensus 376 ~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~-- 452 (752)
+|++|.+++++|+|++ +|+++.||+||+|+|+++|++..+.|.|+||+.+.++|++++++++.||++.|+++||+.+
T Consensus 551 ~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~ 630 (776)
T 4gut_A 551 PVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQ 630 (776)
T ss_dssp CEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHT
T ss_pred eeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCC
Confidence 9999999999999987 7778999999999999999877788999999999999999999999999999999999864
Q ss_pred -CCcceeeccCCCCCceEEEEeeccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEE
Q 004458 453 -LDTFGCLNEQSSKRGEFFLFYGYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTIC 531 (752)
Q Consensus 453 -~~~fg~l~~~~~~~~~~~~~~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v 531 (752)
.+.||.+......++.+..+++.....+..+|++|+.|+.+..+..++++++++.++++|+++||.. .++.|..+.+
T Consensus 631 g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~--~~~~P~~~~v 708 (776)
T 4gut_A 631 GADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQ--EVPDPTKYFV 708 (776)
T ss_dssp TCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTS--CCCCCSEEEE
T ss_pred CCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcc--cccCcceEEE
Confidence 3567777655444566667777654445679999999999999999999999999999999999864 4678999999
Q ss_pred EecCCCCCCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHH
Q 004458 532 TRWGSDPFTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILR 598 (752)
Q Consensus 532 ~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~ 598 (752)
++|.++||+.|+|+++.+|.....++.+.+|+.++||||||+|+..++||||||+.||.|||++|++
T Consensus 709 t~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 709 TRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887889999999778999999999988899999999999999999974
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=3.1e-47 Score=437.49 Aligned_cols=429 Identities=24% Similarity=0.304 Sum_probs=293.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCCCCCCCceEEec-CCCCceEEEeccceeEcCCCccHHHHHHHHcC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRSRPGGRVYTQKM-GKKGEFAAVDLGGSVITGIHANPLGVLARQLS 238 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~~~GGr~~T~~~-~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LG 238 (752)
..++|+|||||++||+||+.|++.| ++|+|||+++++|||++|.+. +| +.+|+|++++++...|++..++.++|
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G----~~~D~G~~~~~~~~~~~~~~~~~~lg 82 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQG----RKYDIGASWHHDTLTNPLFLEEAQLS 82 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGG----CEEESSCCEECCTTTCHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCC----cEEecCCeEEecCCCChHHHHHHHhC
Confidence 3579999999999999999999999 999999999999999999886 43 78999999999877788888888888
Q ss_pred CCcc----cccCCCc-eecCCCccccccchHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCHHHHHHHHHHHHHhhCCH
Q 004458 239 IPLH----KVRDNCP-LYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKG---GFANDVSLGSVLETLRQLYAVARST 310 (752)
Q Consensus 239 l~~~----~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~~~~~~sl~e~l~~l~~~~~~~~s~ 310 (752)
+... ....... .+..++..+.......+ ..+++...++.+... ...++.|+.+++...........++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l~~ 158 (516)
T 1rsg_A 83 LNDGRTRFVFDDDNFIYIDEERGRVDHDKELLL----EIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFLTN 158 (516)
T ss_dssp HHHCCCCEECCCCCCEEEETTTEECTTCTTTCH----HHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGSCH
T ss_pred CCCcceeEEECCCCEEEEcCCCccccccHHHHH----HHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccCH
Confidence 6321 1111111 22222222211111111 122222222221111 1135688998887543322223343
Q ss_pred HHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcCC---cEEcCceEEEEEec-CCc
Q 004458 311 EERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEGV---PIFYEKTVNTIKYG-NEG 386 (752)
Q Consensus 311 ~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~gl---~I~ln~~V~~I~~~-~~g 386 (752)
.....+...+..++...+..+..++....... ..+...++.| ++.|+++|++.+ +|++|++|++|..+ +++
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~----~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~ 233 (516)
T 1rsg_A 159 DQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG----HQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN 233 (516)
T ss_dssp HHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC----CSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSC
T ss_pred HHHHHHHHHHHHHHHHhCCChHHCChHHHHhh----ccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCe
Confidence 33333332222222222222333333222111 2233456677 999999999876 49999999999986 567
Q ss_pred EEEEE-CCEEEEecEEEEcCChhhHhhc---------cccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcc
Q 004458 387 VEVIA-GDQMFQADMVLCTVPLGVLKEK---------TIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTF 456 (752)
Q Consensus 387 v~V~~-~g~~~~AD~VV~AvPl~vLk~~---------~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~f 456 (752)
|.|++ +|++++||+||+|+|+.+|+.. .+.|.|+||+.+.++|++++|++++||++.|+++||+.+...+
T Consensus 234 v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~ 313 (516)
T 1rsg_A 234 VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKI 313 (516)
T ss_dssp EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEE
T ss_pred EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcE
Confidence 88877 7778999999999999999853 4899999999999999999999999999999999998765545
Q ss_pred eeeccCCC---------C------------------Cce-E---EEEeeccccCCCcEEEEEeccchhhhhccC--CHHH
Q 004458 457 GCLNEQSS---------K------------------RGE-F---FLFYGYHTVSGGPVLNALVAGEAAKTFESM--DPSF 503 (752)
Q Consensus 457 g~l~~~~~---------~------------------~~~-~---~~~~~~~~~~g~~vL~~~~~g~~a~~~~~l--sdee 503 (752)
..+...+. . ++. | ..+.+...+.+.++|++|+.|+.+..++.+ ++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~ 393 (516)
T 1rsg_A 314 VTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKER 393 (516)
T ss_dssp EECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHH
T ss_pred EEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHH
Confidence 44332110 0 000 1 122334445677899999999999999998 8998
Q ss_pred HHHH---HHHHHHHhcCCC----CCCCC-------CCe--eEEEEecCCCCCCCCCCCCCcccCCCC-chHHhhcccCCc
Q 004458 504 LLHR---VLNVLRGIYNPK----GIDVP-------DPL--QTICTRWGSDPFTHGSYSHVRVRSSGS-DYDILAESVGSR 566 (752)
Q Consensus 504 l~~~---vl~~L~~if~~~----~~~vp-------~p~--~~~v~rW~~dp~~~Gsys~~~pg~~~~-~~~~l~~pv~~~ 566 (752)
+++. +++.|.++||.. ....+ .|. ++.+++|.+|||++|+|+++.||.... .++.+.++..+|
T Consensus 394 ~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~r 473 (516)
T 1rsg_A 394 LFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSR 473 (516)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSS
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCc
Confidence 8654 666666666531 11111 255 889999999999999999999997543 356676544489
Q ss_pred EEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhc
Q 004458 567 LFFAGEATTRQYPATMHGAYLSGLREASRILRATRV 602 (752)
Q Consensus 567 L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~ 602 (752)
||||||+|+..++||||||+.||.|||++|++.++.
T Consensus 474 l~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 474 IRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp EEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred EEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 999999999888999999999999999999998864
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=4.3e-45 Score=420.00 Aligned_cols=425 Identities=22% Similarity=0.339 Sum_probs=306.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
.++|+|||||++||+||++|++.|++|+|||+++++|||++|.+..+ ++.+|+|++++.+. .+++..+++++|++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~---g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK---VKYVDLGGSYVGPT-QNRILRLAKELGLET 79 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTT---TSCEESSCCEECTT-CHHHHHHHHHTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCC---CcccccCceEecCC-cHHHHHHHHHcCCcc
Confidence 46899999999999999999999999999999999999999998851 26899999999887 467888999999986
Q ss_pred ccccC-CCceecCCCcccccc------chHHHHHHHHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHH
Q 004458 242 HKVRD-NCPLYKPDGAPVNKE------IDSKVEFIFNKLLDKVMELRKIKGGF----------ANDVSLGSVLETLRQLY 304 (752)
Q Consensus 242 ~~~~~-~~~~~~~~G~~~~~~------~~~~~~~~~~~ll~~~~~~~~~~~~~----------~~~~sl~e~l~~l~~~~ 304 (752)
..... ...++..+|+.+..+ ........+..++....++...+... .+++|+.++++.
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~----- 154 (520)
T 1s3e_A 80 YKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDK----- 154 (520)
T ss_dssp EECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHH-----
T ss_pred eecccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHh-----
Confidence 55332 223344455433211 11111112233333333332221110 134677777764
Q ss_pred HhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccC-C------CccCCCCceecCCCHHHHHHHHHc--CCcEEcCc
Q 004458 305 AVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQD-D------PYEMGGDHCFLAGGNWRLIKALCE--GVPIFYEK 375 (752)
Q Consensus 305 ~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~-~------~~~~~g~~~~~~gG~~~L~~aLa~--gl~I~ln~ 375 (752)
...++..+.++.+............++......+... . ....++..+.+.||+++|+++|++ |++|++|+
T Consensus 155 -~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~ 233 (520)
T 1s3e_A 155 -LCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLER 233 (520)
T ss_dssp -HCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEESSC
T ss_pred -hCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcCCcEEcCC
Confidence 2345555555554432222111122221111100000 0 001234567899999999999998 78999999
Q ss_pred eEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCC
Q 004458 376 TVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELD 454 (752)
Q Consensus 376 ~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~ 454 (752)
+|++|..++++|.|++ +|+++.||+||+|+|+.++++ +.|.|+||+.+.+++++++++++.||++.|+++||+...
T Consensus 234 ~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~- 310 (520)
T 1s3e_A 234 PVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKD- 310 (520)
T ss_dssp CEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGT-
T ss_pred eeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCC-
Confidence 9999999988999876 778999999999999999875 668899999999999999999999999999999997642
Q ss_pred cceeeccCCCCCceEEEEeeccccCC-CcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEe
Q 004458 455 TFGCLNEQSSKRGEFFLFYGYHTVSG-GPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTR 533 (752)
Q Consensus 455 ~fg~l~~~~~~~~~~~~~~~~~~~~g-~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~r 533 (752)
..|.+..........+.| +...+++ ..+|++|+.++.+..|.+++++++++.++++|+++||.. .++.|.++..++
T Consensus 311 ~~g~~~~~~~~~~~~~~~-d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~--~~~~p~~~~~~~ 387 (520)
T 1s3e_A 311 YCGTMIIDGEEAPVAYTL-DDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSL--EALEPVHYEEKN 387 (520)
T ss_dssp EEEEEEECSTTCSCSEEE-ECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCG--GGGCCSEEEEEE
T ss_pred CCceeeccCCCCceEEEe-eCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcc--ccCCccEEEEEe
Confidence 223332111111222333 3333443 478999999988888999999999999999999999752 246789999999
Q ss_pred cCCCCCCCCCCC-CCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhcc
Q 004458 534 WGSDPFTHGSYS-HVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQ 603 (752)
Q Consensus 534 W~~dp~~~Gsys-~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~ 603 (752)
|..+||+.|+|+ +..||+.....+.+.+|+ +|||||||+|+..++||||||+.||.+||++|++.++..
T Consensus 388 W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~-~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~ 457 (520)
T 1s3e_A 388 WCEEQYSGGCYTTYFPPGILTQYGRVLRQPV-DRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI 457 (520)
T ss_dssp GGGCTTTCSSSCBCCCTTHHHHHGGGTTCCB-TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred eCCCCCCCCCCccccCCCccccchHHHhCCC-CCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999998 667776433334678888 899999999987788999999999999999999998653
No 6
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1.7e-42 Score=393.54 Aligned_cols=433 Identities=26% Similarity=0.405 Sum_probs=300.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcC---CCccHHHHHHHH
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITG---IHANPLGVLARQ 236 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~---~~~n~l~~L~~~ 236 (752)
..++|+|||||++||+||+.|++.|+ +|+|+|+++++||++++....+ +.+|+|++++.+ ...+++..++++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~----~~~d~g~~~~~~~~~~~~~~~~~~~~~ 78 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG----INVELGANWVEGVNGGKMNPIWPIVNS 78 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT----EEEESSCCEEEEESSSSCCTHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC----cEEeeCCeEEeccCCCCCCHHHHHHHh
Confidence 35799999999999999999999999 8999999999999999998875 799999999984 345678899999
Q ss_pred -cCCCcccccC---CCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHH-hhCCH
Q 004458 237 -LSIPLHKVRD---NCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKG-GFANDVSLGSVLETLRQLYA-VARST 310 (752)
Q Consensus 237 -LGl~~~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~sl~e~l~~l~~~~~-~~~s~ 310 (752)
+|+....... ...++..+|+.++.+........+..+......+..... ...+++++.+. ..+..... ....+
T Consensus 79 ~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~l~~~~~~~~~~~ 157 (472)
T 1b37_A 79 TLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAM-QRLNEHQPNGPATP 157 (472)
T ss_dssp TSCCCEEECCCTTGGGCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHH-HHHHHTSSSSCCSH
T ss_pred hcCCceeeccCccccceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHH-HHHhhhcccccccH
Confidence 9997653221 123555677766543211111111111111111111111 11245565431 11111100 01111
Q ss_pred HHHHHHHHHHHhhhhccCCCchhhhhhccccCCCc-cCCCCce--ecCCCHHHHHHHHHcC-------------CcEEcC
Q 004458 311 EERELLDWHLANLEYANAGCLSDLSATYWDQDDPY-EMGGDHC--FLAGGNWRLIKALCEG-------------VPIFYE 374 (752)
Q Consensus 311 ~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~-~~~g~~~--~~~gG~~~L~~aLa~g-------------l~I~ln 374 (752)
...++++.....++. ......++..+.....+ ..++..+ .++||++.++++|++. .+|++|
T Consensus 158 -~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~ 234 (472)
T 1b37_A 158 -VDMVVDYYKFDYEFA--EPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLN 234 (472)
T ss_dssp -HHHHHHHHHTHHHHS--SCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESS
T ss_pred -HHHHHHHHHHhhhhc--ccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcC
Confidence 222344433222221 11111111111100000 1122222 2489999999999864 379999
Q ss_pred ceEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCC
Q 004458 375 KTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEEL 453 (752)
Q Consensus 375 ~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~ 453 (752)
++|++|...+++|+|++ +|++++||+||+|+|+.+++...+.|.|+||+.+.++|+++++++++||++.|+++||+...
T Consensus 235 ~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~ 314 (472)
T 1b37_A 235 KVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGK 314 (472)
T ss_dssp CCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCST
T ss_pred CEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCC
Confidence 99999999999999877 77799999999999999999766789999999999999999999999999999999998632
Q ss_pred CcceeeccCCCCCceEEEEeec-cccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEE
Q 004458 454 DTFGCLNEQSSKRGEFFLFYGY-HTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICT 532 (752)
Q Consensus 454 ~~fg~l~~~~~~~~~~~~~~~~-~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~ 532 (752)
.++.+...+..++....|... ...++..+|++++.++.+..|..++++++++.+++.|+++||. ..+++|+++.++
T Consensus 315 -~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg--~~~~~~~~~~~~ 391 (472)
T 1b37_A 315 -GREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG--KDVPDATDILVP 391 (472)
T ss_dssp -TCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTT--SCCCCCSEEECC
T ss_pred -CcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCC--CCCCCCceEEec
Confidence 223322211112211222221 1124567788888777777888999999999999999999963 245688888889
Q ss_pred ecCCCCCCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhccCC
Q 004458 533 RWGSDPFTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQKY 605 (752)
Q Consensus 533 rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~~~ 605 (752)
+|..+||+.|+|+++.+|+....++.+.+|+ +|||||||+|+..++||||||+.||.+||++|++.++....
T Consensus 392 ~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~-~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~ 463 (472)
T 1b37_A 392 RWWSDRFYKGTFSNWPVGVNRYEYDQLRAPV-GRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMC 463 (472)
T ss_dssp CTTTCTTTSSSEEECBTTCCHHHHHHHHCCB-TTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred ccCCCCCCCcccCCCCCCCChhHHHHHhccC-CcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999888887655678899999 89999999999877899999999999999999999876443
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=4.2e-43 Score=400.63 Aligned_cols=414 Identities=19% Similarity=0.222 Sum_probs=292.3
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCC--C
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSI--P 240 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl--~ 240 (752)
++|+|||||++||+||++|++.|++|+|||+++++|||++|++.++ +.+|+|++++++.+. .+..+++++|+ +
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g----~~~d~G~~~~~~~~~-~~~~~l~~lgl~~~ 114 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDG----YPYEMGGTWVHWHQS-HVWREITRYKMHNA 114 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETT----EEEECSCCCBCTTSH-HHHHHHHHTTCTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCC----eeecCCCeEecCccH-HHHHHHHHcCCcce
Confidence 7999999999999999999999999999999999999999999875 899999999987665 46778889999 4
Q ss_pred ccccc----CCCceecCC--CccccccchHHHHHHHHHHHHHHHH-----HHHHhcC-C----------CCCCCHHHHHH
Q 004458 241 LHKVR----DNCPLYKPD--GAPVNKEIDSKVEFIFNKLLDKVME-----LRKIKGG-F----------ANDVSLGSVLE 298 (752)
Q Consensus 241 ~~~~~----~~~~~~~~~--G~~~~~~~~~~~~~~~~~ll~~~~~-----~~~~~~~-~----------~~~~sl~e~l~ 298 (752)
..... ....++..+ |.....+... ....+...+..... .+..... . .+++|+.++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 193 (495)
T 2vvm_A 115 LSPSFNFSRGVNHFQLRTNPTTSTYMTHEA-EDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERID 193 (495)
T ss_dssp EEESCCCSSSCCEEEEESSTTCCEEECHHH-HHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHHHHHH
T ss_pred eecccccCCCceEEEecCCCCceeecCHHH-HHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHHHHHH
Confidence 43332 122333333 4443333211 11122222111111 0000000 0 12456777665
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccC--CCc---cCCCCceecCCCHHHHHHHHHc-----C
Q 004458 299 TLRQLYAVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQD--DPY---EMGGDHCFLAGGNWRLIKALCE-----G 368 (752)
Q Consensus 299 ~l~~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~--~~~---~~~g~~~~~~gG~~~L~~aLa~-----g 368 (752)
... ...++..+.++.+.+..........++......|... ..+ ......+.++||++.++++|++ |
T Consensus 194 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g 269 (495)
T 2vvm_A 194 QIR----DELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAAGTG 269 (495)
T ss_dssp HHG----GGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHHTTT
T ss_pred Hhh----ccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhhhcC
Confidence 421 1145666666665554433222222332222111100 000 0112346789999999998876 3
Q ss_pred -CcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecC
Q 004458 369 -VPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPY 446 (752)
Q Consensus 369 -l~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~ 446 (752)
++|++|++|++|...+++|.|++ +|++++||+||+|+|+.++++ +.|.|+||+.+.++++.+.|++..||++.|++
T Consensus 270 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~ 347 (495)
T 2vvm_A 270 RLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHAEVDN 347 (495)
T ss_dssp CEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEEEESC
T ss_pred ceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEEEECC
Confidence 66999999999999888899877 667899999999999999985 66899999999999999999999999999999
Q ss_pred cccccCCCcceeeccCCCCCceEEEEeeccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 004458 447 VFWGEELDTFGCLNEQSSKRGEFFLFYGYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDP 526 (752)
Q Consensus 447 ~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p 526 (752)
++|+ ...|...++. ...+.|.+...+.+..+|++|+. ..+. +++++.++.++++|++++|. .+.|
T Consensus 348 ~~~~---~~~g~~~~~~---~~~~~~~~~~~~~~~~vl~~~~~-~~~~----~~~~e~~~~~~~~L~~~~~~----~~~~ 412 (495)
T 2vvm_A 348 KDMR---SWTGIAYPFN---KLCYAIGDGTTPAGNTHLVCFGN-SANH----IQPDEDVRETLKAVGQLAPG----TFGV 412 (495)
T ss_dssp GGGG---GEEEEECSSC---SSCEEEEEEECTTSCEEEEEEEC-STTC----CCTTTCHHHHHHHHHTTSTT----SCCE
T ss_pred ccCC---CceeEecCCC---CcEEEecCCCCCCCCeEEEEEeC-cccc----CCCHHHHHHHHHHHHHhcCC----CCCc
Confidence 9994 2233333221 22344444444556678888764 3221 45667788999999998863 3578
Q ss_pred eeEEEEecCCCCCCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhccC
Q 004458 527 LQTICTRWGSDPFTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQK 604 (752)
Q Consensus 527 ~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~~ 604 (752)
.++.+++|..+||+.|+|+++.||+....++.+.+|. ++||||||+++..+++|||||+.||.+||++|++.++...
T Consensus 413 ~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~-~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~~ 489 (495)
T 2vvm_A 413 KRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKH-GGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTKR 489 (495)
T ss_dssp EEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCB-TTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred eEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcC-CCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999987655678889998 8999999999977899999999999999999999986543
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=6.6e-43 Score=394.23 Aligned_cols=419 Identities=23% Similarity=0.333 Sum_probs=297.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
.++|+|||||++||+||++|++.|++|+|+|+++++||+++|.+..+ +.+|.|++++.+. .+.+..+++++|++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g----~~~~~g~~~~~~~-~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG----AVLEIGGQWVSPD-QTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT----EEEECSCCCBCTT-CHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC----ceeccCCeEecCc-cHHHHHHHHHcCCcc
Confidence 57999999999999999999999999999999999999999998864 7899999998876 456888999999976
Q ss_pred cccc-CCCceecCC-Cccccc-----cchHHHHHHHHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHH
Q 004458 242 HKVR-DNCPLYKPD-GAPVNK-----EIDSKVEFIFNKLLDKVMELRKIKGGF----------ANDVSLGSVLETLRQLY 304 (752)
Q Consensus 242 ~~~~-~~~~~~~~~-G~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~~~----------~~~~sl~e~l~~l~~~~ 304 (752)
.... ....++..+ |+.+.. +........+..++.....+....... .++.|+.++++.
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~----- 154 (453)
T 2yg5_A 80 FERYREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLIN----- 154 (453)
T ss_dssp EECCCCSEEEEECTTSCEEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHH-----
T ss_pred cccccCCCEEEEeCCCceeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHh-----
Confidence 5432 222233222 433221 111111111122222222232222110 135677777764
Q ss_pred HhhCCHHHHHHHHHHHHhhhhccCC-Cchhhhhhcccc-CCCc-----cCCCCceecCCCHHHHHHHHHc--CCcEEcCc
Q 004458 305 AVARSTEERELLDWHLANLEYANAG-CLSDLSATYWDQ-DDPY-----EMGGDHCFLAGGNWRLIKALCE--GVPIFYEK 375 (752)
Q Consensus 305 ~~~~s~~~~~~l~~~~~~le~~~~~-~l~~ls~~~~~~-~~~~-----~~~g~~~~~~gG~~~L~~aLa~--gl~I~ln~ 375 (752)
...++..+.++.+.+......... .++......+.. ...+ ..++..++++||++.++++|++ |.+|++|+
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~ 233 (453)
T 2yg5_A 155 -QSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALGDDVFLNA 233 (453)
T ss_dssp -HCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHGGGEECSC
T ss_pred -hcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcCCcEEcCC
Confidence 234555555555443221111111 222211111000 0000 0012357899999999999988 56999999
Q ss_pred eEEEEEecCCc-EEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCC
Q 004458 376 TVNTIKYGNEG-VEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELD 454 (752)
Q Consensus 376 ~V~~I~~~~~g-v~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~ 454 (752)
+|++|..++++ |.|+++++++.||+||+|+|+.++++ +.|.|+||+.+.++++++++++..||++.|+++||+...
T Consensus 234 ~V~~i~~~~~~~v~v~~~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~- 310 (453)
T 2yg5_A 234 PVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDG- 310 (453)
T ss_dssp CEEEEEEETTEEEEEETTTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGT-
T ss_pred ceEEEEEeCCceEEEEECCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCC-
Confidence 99999999888 88888889999999999999999874 568899999999999999999999999999999997542
Q ss_pred cceeeccCCCCCceEEEEeeccccCC-CcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEe
Q 004458 455 TFGCLNEQSSKRGEFFLFYGYHTVSG-GPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTR 533 (752)
Q Consensus 455 ~fg~l~~~~~~~~~~~~~~~~~~~~g-~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~r 533 (752)
..|.+.... ..+...++...+++ ..+|++++.++.+..|.+++++++++.+++.|+++||+ .++.|+++.+++
T Consensus 311 ~~g~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~---~~~~p~~~~~~~ 384 (453)
T 2yg5_A 311 LSGTGFGAS---EVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGP---KAEEPVVYYESD 384 (453)
T ss_dssp EEEEEECTT---SSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCG---GGGCCSEEEECC
T ss_pred CCceeecCC---CCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCc---cCCCccEEEEee
Confidence 223332221 11223333334444 46888999888888899999999999999999999975 356788999999
Q ss_pred cCCCCCCCCCCC-CCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhh
Q 004458 534 WGSDPFTHGSYS-HVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATR 601 (752)
Q Consensus 534 W~~dp~~~Gsys-~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~ 601 (752)
|..+||+.|+|+ ...||......+.+.+|+ +|||||||+|+..++|+||||+.||.+||++|++.++
T Consensus 385 W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~-~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 385 WGSEEWTRGCYAASFDLGGLHRYGADSRTPV-GPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp TTTCTTTCSSSCEEECTTHHHHHGGGTTCCB-TTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCCCCCCcCcCCCCccccchHHHhCCc-CceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 999999999996 456664323334577888 8999999999877889999999999999999998763
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=1e-40 Score=373.76 Aligned_cols=404 Identities=23% Similarity=0.274 Sum_probs=279.6
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCcc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPLH 242 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~~ 242 (752)
+||+|||||++||+||++|++.|++|+|||+++++||++.+...+. ..+..+|+|++++.....+.+..+++++|++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c-ipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN-VPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS-STTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC-CCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 6999999999999999999999999999999999999999987761 012689999999988734557778889999866
Q ss_pred cccCCCcee--cCCCccccc-----cchHHHHHHHHHHHHHHHHHHHHh----cC-CCCCCCHHHHHHHHHHHHHhhCCH
Q 004458 243 KVRDNCPLY--KPDGAPVNK-----EIDSKVEFIFNKLLDKVMELRKIK----GG-FANDVSLGSVLETLRQLYAVARST 310 (752)
Q Consensus 243 ~~~~~~~~~--~~~G~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~----~~-~~~~~sl~e~l~~l~~~~~~~~s~ 310 (752)
......... ..++..... .....+...+..++.....+.... .. ...+.++.+++... ..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~------~~~~ 154 (431)
T 3k7m_X 81 AASEFTSFRHRLGPTAVDQAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKL------DLPP 154 (431)
T ss_dssp ECCCCCEECCBSCTTCCSSSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHH------TCCH
T ss_pred ecCCCCcEEEEecCCeecCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhc------CCCH
Confidence 544333222 233333221 111112222222222111110000 00 00126677776542 2344
Q ss_pred HHHHHHHHHHHhhhhccCCCchhhhhhcccc-C-CCc---cCCCCceecCCCHHHHHHHHHcCC-cEEcCceEEEEEecC
Q 004458 311 EERELLDWHLANLEYANAGCLSDLSATYWDQ-D-DPY---EMGGDHCFLAGGNWRLIKALCEGV-PIFYEKTVNTIKYGN 384 (752)
Q Consensus 311 ~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~-~-~~~---~~~g~~~~~~gG~~~L~~aLa~gl-~I~ln~~V~~I~~~~ 384 (752)
....++..............++......+.. . ..+ ...... .+.+|++.+++++++.+ +|++|++|++|+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~~~~g~i~~~~~V~~i~~~~ 233 (431)
T 3k7m_X 155 VSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSADLVDAMSQEIPEIRLQTVVTGIDQSG 233 (431)
T ss_dssp HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTHHHHHHHHTTCSCEESSCCEEEEECSS
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHHHHHHHHHhhCCceEeCCEEEEEEEcC
Confidence 4444444333322211112122211111100 0 000 001112 67999999999998743 999999999999999
Q ss_pred CcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCC
Q 004458 385 EGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQS 463 (752)
Q Consensus 385 ~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~ 463 (752)
++|+|++ +|++++||+||+|+|+++++. +.|.|+||+.+.++++.+.++...||.+.|+++||. .++ ..+.
T Consensus 234 ~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~--~~d~ 305 (431)
T 3k7m_X 234 DVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG----IEC--VGDG 305 (431)
T ss_dssp SSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEE--EBSS
T ss_pred CeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceE--cCCC
Confidence 9999877 677799999999999999984 778999999999999999999999999999999842 333 2222
Q ss_pred CCCceEEEEeecccc-CCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCC
Q 004458 464 SKRGEFFLFYGYHTV-SGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHG 542 (752)
Q Consensus 464 ~~~~~~~~~~~~~~~-~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~G 542 (752)
. .. .++++... .+..+|++++.|+. +...+.+ .+.+.|++++|. ++ |+++..++|..|||++|
T Consensus 306 ~-~~---~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~~----~~~~~l~~~~~~----~~-~~~~~~~~W~~d~~~~G 369 (431)
T 3k7m_X 306 I-FP---TLYDYCEVSESERLLVAFTDSGS---FDPTDIG----AVKDAVLYYLPE----VE-VLGIDYHDWIADPLFEG 369 (431)
T ss_dssp S-SS---EEEEEEECSSSEEEEEEEEETTT---CCTTCHH----HHHHHHHHHCTT----CE-EEEEECCCTTTCTTTSS
T ss_pred C-EE---EEEeCcCCCCCCeEEEEEecccc---CCCCCHH----HHHHHHHHhcCC----CC-ccEeEecccCCCCCCCC
Confidence 1 11 22333333 56678889988765 3333433 356778888863 23 78888899999999999
Q ss_pred CCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHH
Q 004458 543 SYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRA 599 (752)
Q Consensus 543 sys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~ 599 (752)
+|+++.||+....++.+++|+ +|||||||+|+..++||||||+.||.|||.+|+..
T Consensus 370 ~~~~~~~g~~~~~~~~l~~p~-g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 370 PWVAPRVGQFSRVHKELGEPA-GRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp SSCCCCTTTTTTSSGGGGSCB-TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCcCCCCCcccHHHHhCCC-CcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 999999999888899999998 99999999999889999999999999999999964
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=8.9e-41 Score=381.67 Aligned_cols=420 Identities=22% Similarity=0.276 Sum_probs=287.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIP 240 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~ 240 (752)
..++|+|||||++||+||+.|++.|++|+|+|+++++||++.|++.... ++.+|+|++++...+ +.+..+++++|++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~~~~~g~~ 108 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEA--GWYANLGPMRLPEKH-RIVREYIRKFDLR 108 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTT--TEEEESSCCCEETTC-HHHHHHHHHTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCC--CchhhcCcccccchH-HHHHHHHHHhCCC
Confidence 3679999999999999999999999999999999999999999875321 278999999997654 5688899999998
Q ss_pred ccccc--CCCceecCCCcccc----------------c-cchHHHHHHHH----HHHHHHHHH--HHHhcCCCCCCCHHH
Q 004458 241 LHKVR--DNCPLYKPDGAPVN----------------K-EIDSKVEFIFN----KLLDKVMEL--RKIKGGFANDVSLGS 295 (752)
Q Consensus 241 ~~~~~--~~~~~~~~~G~~~~----------------~-~~~~~~~~~~~----~ll~~~~~~--~~~~~~~~~~~sl~e 295 (752)
...+. ....++..+|.... . .........+. .+......+ ..... ..++.++.+
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~ 187 (498)
T 2iid_A 109 LNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILN-KYDTYSTKE 187 (498)
T ss_dssp EEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHH-HHTTSBHHH
T ss_pred ceeecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHH-HhhhhhHHH
Confidence 65432 12223333332110 0 00001111111 111111100 00000 113466666
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcCC--cEEc
Q 004458 296 VLETLRQLYAVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEGV--PIFY 373 (752)
Q Consensus 296 ~l~~l~~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~gl--~I~l 373 (752)
++.... ..+......+...+.............+.... .+.....++.++||+++|+++|++.+ +|++
T Consensus 188 ~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gG~~~l~~~l~~~l~~~i~~ 257 (498)
T 2iid_A 188 YLIKEG-----DLSPGAVDMIGDLLNEDSGYYVSFIESLKHDD-----IFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHF 257 (498)
T ss_dssp HHHHTS-----CCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHH-----HHTTCCCEEEETTCTTHHHHHHHHHTGGGEES
T ss_pred HHHHcc-----CCCHHHHHHHHHhcCcccchhHHHHHHHHHHh-----ccccCcceEEeCCcHHHHHHHHHHhccccccc
Confidence 665410 12233222221111000000000011110000 01112446789999999999999866 7999
Q ss_pred CceEEEEEecCCcEEEEE-CCE----EEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcc
Q 004458 374 EKTVNTIKYGNEGVEVIA-GDQ----MFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVF 448 (752)
Q Consensus 374 n~~V~~I~~~~~gv~V~~-~g~----~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~f 448 (752)
|++|++|..++++|.|++ +++ +++||+||+|+|+.++. .+.|.|+||+.+.+++++++|+++.||++.|+++|
T Consensus 258 ~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 258 NAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp SCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred CCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 999999999998998865 443 58999999999999886 47889999999999999999999999999999999
Q ss_pred cccCCCcceee-ccCCCCCceEEEEeec-cccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCC-
Q 004458 449 WGEELDTFGCL-NEQSSKRGEFFLFYGY-HTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPD- 525 (752)
Q Consensus 449 W~~~~~~fg~l-~~~~~~~~~~~~~~~~-~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~- 525 (752)
|+.+. .++.. ..+.. ..+.+++. ..|.+..+|.+|+.|+.+..+..++++++++.++++|+++|+.....+..
T Consensus 336 w~~~~-~~~~~~~~~~~---~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~ 411 (498)
T 2iid_A 336 WEDDG-IHGGKSTTDLP---SRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSF 411 (498)
T ss_dssp GGGGT-CCSSEEEESST---TCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred ccCCC-ccCCcccCCCC---cceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhh
Confidence 97642 22222 22211 12334433 34566778888999998988999999999999999999999732000000
Q ss_pred CeeEEEEecCCCCCCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhc
Q 004458 526 PLQTICTRWGSDPFTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRV 602 (752)
Q Consensus 526 p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~ 602 (752)
+....+++|..+||+.|+|+++.|+......+.+.+|. ++|||||++++.. +|||+||+.||.+||++|++.+..
T Consensus 412 ~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~-~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 412 CYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQ-GRIYFAGEYTAQA-HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCB-TTEEECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCC-CcEEEEEcccccC-CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 12367889999999999999888886555567788888 8999999999864 489999999999999999999853
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=2.2e-38 Score=361.10 Aligned_cols=426 Identities=21% Similarity=0.303 Sum_probs=283.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCC-------------CceEEEeccceeEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKK-------------GEFAAVDLGGSVITGIH 226 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~-------------g~~~~~d~Ga~~i~~~~ 226 (752)
.+.++|+|||||++||+||++|++.|++|+|||+++++||+++|.+.++. +.+..+|.|++++...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 34679999999999999999999999999999999999999999886410 02367999999988755
Q ss_pred ccHHHHHHHHcCCCcccccCC--Cc-ee-cCC----CccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCC------CC
Q 004458 227 ANPLGVLARQLSIPLHKVRDN--CP-LY-KPD----GAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFAND------VS 292 (752)
Q Consensus 227 ~n~l~~L~~~LGl~~~~~~~~--~~-~~-~~~----G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~------~s 292 (752)
.+..+++++|++...+... .. ++ ..+ |..+..+.. ....+..+.+........ ..+... .+
T Consensus 89 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 163 (489)
T 2jae_A 89 --ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAA--KADTFGYMSELLKKATDQ-GALDQVLSREDKDA 163 (489)
T ss_dssp --THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHH--HHHHHHHHHHHHHHHHHH-TTTTTTSCHHHHHH
T ss_pred --HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHH--hhhhhccHHHHHHHHHhc-cccccccchhhHHH
Confidence 6888999999986654332 22 33 332 554432211 111111111111111111 111111 13
Q ss_pred HHHHHHHHHHHHH-hhCCHHHHHHHHHHHH--hhh-hc---cCCCchhhhhh-ccccC---CCccCCCCceecCCCHHHH
Q 004458 293 LGSVLETLRQLYA-VARSTEERELLDWHLA--NLE-YA---NAGCLSDLSAT-YWDQD---DPYEMGGDHCFLAGGNWRL 361 (752)
Q Consensus 293 l~e~l~~l~~~~~-~~~s~~~~~~l~~~~~--~le-~~---~~~~l~~ls~~-~~~~~---~~~~~~g~~~~~~gG~~~L 361 (752)
+.+++..+..... ...+..... .|... ... .. ....+..+... .|... ......+.+++++||+++|
T Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l 241 (489)
T 2jae_A 164 LSEFLSDFGDLSDDGRYLGSSRR--GYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMDRI 241 (489)
T ss_dssp HHHHHHHHTTCCTTSCCCCCGGG--CEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEETTCTTHH
T ss_pred HHHHHHHhhhhhhccccccccch--hhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEeecCCHHHH
Confidence 4444332100000 000000000 00000 000 00 00011222111 11100 0112235678899999999
Q ss_pred HHHHHcC---CcEEcCceEEEEEecCCcEEEEE-CC---EEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCC
Q 004458 362 IKALCEG---VPIFYEKTVNTIKYGNEGVEVIA-GD---QMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGF 434 (752)
Q Consensus 362 ~~aLa~g---l~I~ln~~V~~I~~~~~gv~V~~-~g---~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~ 434 (752)
+++|++. .+|++|++|++|.+++++|+|++ +| +++.||+||+|+|+.+++. +.+ +||+.+.+++++++|
T Consensus 242 ~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~~~l~~~~~ 317 (489)
T 2jae_A 242 YYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVLTALKAAKP 317 (489)
T ss_dssp HHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHHHHHHTEEC
T ss_pred HHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHHHHHHhCCC
Confidence 9999985 46999999999999999999865 54 6899999999999999875 344 799999999999999
Q ss_pred ccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeeccc-c-CCCcEEEEEeccchhhhhccCCHHHHHHHHHHHH
Q 004458 435 GLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYHT-V-SGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVL 512 (752)
Q Consensus 435 g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~-~-~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L 512 (752)
++..||++.|+++||+.+...+|.+..... ....++++... + +.+.++.+|+.|+.+..|..++++++++.+++.|
T Consensus 318 ~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~--~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L 395 (489)
T 2jae_A 318 SSSGKLGIEYSRRWWETEDRIYGGASNTDK--DISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEG 395 (489)
T ss_dssp CCEEEEEEEESSCHHHHTTCCCSCEEEESS--TTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCCccCCCCcccccccCCC--CceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHH
Confidence 999999999999999876566654432211 12234433221 1 2333445688999998999999999999999999
Q ss_pred HHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCc------ccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHH
Q 004458 513 RGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVR------VRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAY 586 (752)
Q Consensus 513 ~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~------pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl 586 (752)
+++||.. ..+.|....+++|.++||+.|+|+.+. |+.....++.+.+|. +||||||++++. ++++|+||+
T Consensus 396 ~~~~~~~--~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~l~faG~~~~~-~~~~v~gAi 471 (489)
T 2jae_A 396 SEIHGEK--YTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPV-DKIYFAGDHLSN-AIAWQHGAL 471 (489)
T ss_dssp HHHHCGG--GGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCB-TTEEECSGGGBS-STTSHHHHH
T ss_pred HHHcCcc--hhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCC-CcEEEeEHHhcc-CccHHHHHH
Confidence 9999741 113567778889999999999998776 776656678888887 899999999985 679999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 004458 587 LSGLREASRILRATRV 602 (752)
Q Consensus 587 ~SG~rAA~~Il~~l~~ 602 (752)
.||.+||++|++.++.
T Consensus 472 ~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 472 TSARDVVTHIHERVAQ 487 (489)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988754
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-37 Score=352.13 Aligned_cols=408 Identities=17% Similarity=0.169 Sum_probs=278.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC------CeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHH
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG------FKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLAR 235 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g------~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~ 235 (752)
+++|+|||||++||+||++|++.| ++|+|||+++++||+++|...++ +.+|.|++++...+. .+..+++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g----~~~d~G~~~~~~~~~-~~~~l~~ 79 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG----YIIERGPDSFLERKK-SAPQLVK 79 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT----CCEESSCCCEETTCT-HHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC----EEeccChhhhhhCCH-HHHHHHH
Confidence 479999999999999999999999 99999999999999999998865 789999999887754 4788999
Q ss_pred HcCCCccccc--CCCceecCCCccccccchHH------HHHH-HHHHHH---HHHHHHHHhc---CCCCCCCHHHHHHHH
Q 004458 236 QLSIPLHKVR--DNCPLYKPDGAPVNKEIDSK------VEFI-FNKLLD---KVMELRKIKG---GFANDVSLGSVLETL 300 (752)
Q Consensus 236 ~LGl~~~~~~--~~~~~~~~~G~~~~~~~~~~------~~~~-~~~ll~---~~~~~~~~~~---~~~~~~sl~e~l~~l 300 (752)
++|++..... ....++..+|+....+.... +... ...++. ......+... ...++.++.+++...
T Consensus 80 ~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 159 (470)
T 3i6d_A 80 DLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRR 159 (470)
T ss_dssp HTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHHHHH
T ss_pred HcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHHHHh
Confidence 9999765432 22334445555443322110 0000 001111 1111112211 224578888888651
Q ss_pred HHHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhcccc------CC-----------------CccCCCCceecCCC
Q 004458 301 RQLYAVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQ------DD-----------------PYEMGGDHCFLAGG 357 (752)
Q Consensus 301 ~~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~------~~-----------------~~~~~g~~~~~~gG 357 (752)
........++.+....+.......++......... .. .....+.++.+++|
T Consensus 160 ------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 233 (470)
T 3i6d_A 160 ------VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTG 233 (470)
T ss_dssp ------SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTC
T ss_pred ------cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCCh
Confidence 11222233333333332222222222211110000 00 00113466789999
Q ss_pred HHHHHHHHHcCC---cEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcC
Q 004458 358 NWRLIKALCEGV---PIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLG 433 (752)
Q Consensus 358 ~~~L~~aLa~gl---~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~ 433 (752)
++.|+++|++.+ +|++|++|++|+.++++|.|++ +|+++.||+||+|+|+.+++++ .+.|++ .+++++++
T Consensus 234 ~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l--~~~~~~----~~~~~~~~ 307 (470)
T 3i6d_A 234 LQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGM--LSELPA----ISHLKNMH 307 (470)
T ss_dssp THHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHH--TTTSTT----HHHHHTCE
T ss_pred HHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHH--cCCchh----hHHHhcCC
Confidence 999999999977 7999999999999999999987 7778999999999999999863 334444 68899999
Q ss_pred CccEEEEEEEecCcccccCCCcceeeccCCCCCceE-EEE----eeccccCCCcEEEEEeccchhhhhccCCHHHHHHHH
Q 004458 434 FGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEF-FLF----YGYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRV 508 (752)
Q Consensus 434 ~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~-~~~----~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~v 508 (752)
|+++.+|++.|+++||+.+.+.+|++.+........ ..| ++...|.+..+|++++.+..+..+..++++++++.+
T Consensus 308 ~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (470)
T 3i6d_A 308 STSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIV 387 (470)
T ss_dssp EEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHH
T ss_pred CCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHH
Confidence 999999999999999987777888887654322211 122 233455667788888888777788899999999999
Q ss_pred HHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCC---CCchHHhhcccCCcEEEecccccCcCCcchHHH
Q 004458 509 LNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSS---GSDYDILAESVGSRLFFAGEATTRQYPATMHGA 585 (752)
Q Consensus 509 l~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~---~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGA 585 (752)
+++|+++||.. ++|....+++|... +..+.+|.. ....+.+.+|. +||||||+++. ..+|+||
T Consensus 388 ~~~l~~~~g~~----~~p~~~~~~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~-~~l~~aG~~~~---g~gv~~a 453 (470)
T 3i6d_A 388 LEDLKKVMNIN----GEPEMTCVTRWHES------MPQYHVGHKQRIKELREALASAY-PGVYMTGASFE---GVGIPDC 453 (470)
T ss_dssp HHHHGGGSCCC----SCCSEEEEEEEEEE------EEECBTTHHHHHHHHHHHHHHHS-TTEEECSTTTS---CCSHHHH
T ss_pred HHHHHHHhCCC----CCceEEEEEEcCCc------cCCCCCCHHHHHHHHHHHHHhhC-CCEEEEeecCC---CCCHHHH
Confidence 99999999853 57888899999752 112233321 11233466677 89999999986 3469999
Q ss_pred HHHHHHHHHHHHHHh
Q 004458 586 YLSGLREASRILRAT 600 (752)
Q Consensus 586 l~SG~rAA~~Il~~l 600 (752)
+.||.++|++|++.+
T Consensus 454 ~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 454 IDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999876
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2e-36 Score=343.62 Aligned_cols=410 Identities=17% Similarity=0.172 Sum_probs=270.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSI 239 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl 239 (752)
...++|+|||||++||+||+.|++.|++|+|||+++++|||++|++..+ +.+|.|++++.+.+ +.+..+++++|+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g----~~~~~g~~~~~~~~-~~~~~~~~~~gl 88 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG----YLVEQGPNSFLDRE-PATRALAAALNL 88 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT----EEEESSCCCEETTC-HHHHHHHHHTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC----eeeecChhhhhhhh-HHHHHHHHHcCC
Confidence 4468999999999999999999999999999999999999999999875 89999999998753 568889999999
Q ss_pred Cccccc----CCCceecCCCccccccchHHHHHHHH----HHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHHHhhC
Q 004458 240 PLHKVR----DNCPLYKPDGAPVNKEIDSKVEFIFN----KLLDKVMELRKIKGG---FANDVSLGSVLETLRQLYAVAR 308 (752)
Q Consensus 240 ~~~~~~----~~~~~~~~~G~~~~~~~~~~~~~~~~----~ll~~~~~~~~~~~~---~~~~~sl~e~l~~l~~~~~~~~ 308 (752)
...... ....+++.+|+.+..+.+. ...+. .+.+....+...... ..++.|+.++++.. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~~ 160 (478)
T 2ivd_A 89 EGRIRAADPAAKRRYVYTRGRLRSVPASP--PAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRH------LG 160 (478)
T ss_dssp GGGEECSCSSCCCEEEEETTEEEECCCSH--HHHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHH------TC
T ss_pred cceeeecCccccceEEEECCEEEECCCCH--HHhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHh------hC
Confidence 643321 2234445666654433221 11100 001111111111111 13567999988751 11
Q ss_pred CHHHHHHHHHHHHhhhhccCCCchhhhh--------------------h---ccc----cCCCccCCCCceecCCCHHHH
Q 004458 309 STEERELLDWHLANLEYANAGCLSDLSA--------------------T---YWD----QDDPYEMGGDHCFLAGGNWRL 361 (752)
Q Consensus 309 s~~~~~~l~~~~~~le~~~~~~l~~ls~--------------------~---~~~----~~~~~~~~g~~~~~~gG~~~L 361 (752)
.+....++.+.+..........++.... . ... ....+...+..++++||+++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l 240 (478)
T 2ivd_A 161 HRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVL 240 (478)
T ss_dssp HHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHH
T ss_pred HHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHH
Confidence 1122222222221111111111110000 0 000 000011115678899999999
Q ss_pred HHHHHc--CCcEEcCceEEEEEecCCcEEEEE----CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCc
Q 004458 362 IKALCE--GVPIFYEKTVNTIKYGNEGVEVIA----GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFG 435 (752)
Q Consensus 362 ~~aLa~--gl~I~ln~~V~~I~~~~~gv~V~~----~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g 435 (752)
+++|++ +.+|++|++|++|..++++|.|++ +|+++.||+||+|+|+.++.++ .|++|+.+.++++++.++
T Consensus 241 ~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l~~l~~~~~~~l~~~~~~ 316 (478)
T 2ivd_A 241 IDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL----LRPLDDALAALVAGIAYA 316 (478)
T ss_dssp HHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH----HTTTCHHHHHHHHTCCBC
T ss_pred HHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHH----hhccCHHHHHHHhcCCCC
Confidence 999998 458999999999999888888875 6778999999999999998752 267999999999999999
Q ss_pred cEEEEEEEecCcccccCCCcceeeccCCCCCceE-EEEeec----cccCCCcEEEEEeccchhhhhccCCHHHHHHHHHH
Q 004458 436 LLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEF-FLFYGY----HTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLN 510 (752)
Q Consensus 436 ~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~-~~~~~~----~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~ 510 (752)
+..++++.|++++|+.+ +.++.+.+........ ..|.+. ..|++..+|++++.+..+..+..++++++++.+++
T Consensus 317 ~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (478)
T 2ivd_A 317 PIAVVHLGFDAGTLPAP-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALARE 395 (478)
T ss_dssp CEEEEEEEECTTSSCCC-CSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHH
T ss_pred cEEEEEEEEccccCCCC-CceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHH
Confidence 99999999999999864 4566665321111222 233221 23556678888988887777888999999999999
Q ss_pred HHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCCchHHhh---cccCCcEEEecccccCcCCcchHHHHH
Q 004458 511 VLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGSDYDILA---ESVGSRLFFAGEATTRQYPATMHGAYL 587 (752)
Q Consensus 511 ~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~---~pv~~~L~fAGe~ts~~~~g~veGAl~ 587 (752)
.|+++||.. ..|....+++|... |..+.+++. .....+. .++ +||||||+++. .++|+||+.
T Consensus 396 ~l~~~~~~~----~~p~~~~~~~w~~~------~p~~~~g~~-~~~~~~~~~~~~~-~~l~~aG~~~~---g~gv~gA~~ 460 (478)
T 2ivd_A 396 ELKALAGVT----ARPSFTRVFRWPLG------IPQYNLGHL-ERVAAIDAALQRL-PGLHLIGNAYK---GVGLNDCIR 460 (478)
T ss_dssp HHHHHHCCC----SCCSEEEEEEESSC------CBCCBTTHH-HHHHHHHHHHHTS-TTEEECSTTTS---CCSHHHHHH
T ss_pred HHHHHhCCC----CCCcEEEEEECCCc------ccCCCcCHH-HHHHHHHHHHhhC-CCEEEEccCCC---CCCHHHHHH
Confidence 999999853 36777788899752 323344431 1122221 114 79999999984 346999999
Q ss_pred HHHHHHHHHHHHhhc
Q 004458 588 SGLREASRILRATRV 602 (752)
Q Consensus 588 SG~rAA~~Il~~l~~ 602 (752)
||.+||++|++.++.
T Consensus 461 SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 461 NAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999887754
No 14
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=6.6e-37 Score=357.67 Aligned_cols=434 Identities=14% Similarity=0.144 Sum_probs=271.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC--------CeEEEEcCCC-CC----------------CCCceEEecCCC---CceE
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG--------FKVVVLEGRS-RP----------------GGRVYTQKMGKK---GEFA 213 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g--------~~v~v~E~~~-~~----------------GGr~~T~~~~g~---g~~~ 213 (752)
.++|+|||||++||+||++|++.| ++|+|||+++ ++ |||+.+...... ..+.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 468999999999999999999999 9999999999 99 999999987311 1237
Q ss_pred EEeccceeEcCCCccHHHHHHHHc-CCC--cccccCC---Ccee-------cCCCcc-cccc-chHHHHHHHHHHHHHHH
Q 004458 214 AVDLGGSVITGIHANPLGVLARQL-SIP--LHKVRDN---CPLY-------KPDGAP-VNKE-IDSKVEFIFNKLLDKVM 278 (752)
Q Consensus 214 ~~d~Ga~~i~~~~~n~l~~L~~~L-Gl~--~~~~~~~---~~~~-------~~~G~~-~~~~-~~~~~~~~~~~ll~~~~ 278 (752)
.+|+|++++...+. .+..+++++ |++ ...+... ...+ ..+|+. .... ........+..+.....
T Consensus 136 ~~e~G~~~~~~~~~-~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~ 214 (721)
T 3ayj_A 136 IYEVGAMRFPEIAG-LTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLV 214 (721)
T ss_dssp EEECSCCCEETTCH-HHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHT
T ss_pred EEecCCEEecCccH-HHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHH
Confidence 99999999987664 567889999 986 2222221 1222 233333 1111 01001111111110000
Q ss_pred -------------------HHHHHhcCCC---------------------CCCCHHHHHHHHH--HHHHhhC-------C
Q 004458 279 -------------------ELRKIKGGFA---------------------NDVSLGSVLETLR--QLYAVAR-------S 309 (752)
Q Consensus 279 -------------------~~~~~~~~~~---------------------~~~sl~e~l~~l~--~~~~~~~-------s 309 (752)
++.+.+.... +...+.+..+.+. .+..... .
T Consensus 215 ~~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~~d~~S~~~~~~~L~ 294 (721)
T 3ayj_A 215 GNPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVDGVLD 294 (721)
T ss_dssp CCSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHHHHHTSSCCGGGTSC
T ss_pred HHhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHhhcccchhHHHHHHH
Confidence 0001111000 0011111111111 1111111 1
Q ss_pred H-HHHH-HHHHHHHhhhh-----ccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcC----CcEEcCceEE
Q 004458 310 T-EERE-LLDWHLANLEY-----ANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEG----VPIFYEKTVN 378 (752)
Q Consensus 310 ~-~~~~-~l~~~~~~le~-----~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~g----l~I~ln~~V~ 378 (752)
. .... ..++ +..+.. ......+.+....+. ....++.++.+.||+++|+++|++. ..|+++++|+
T Consensus 295 ~~~~~s~~~~~-~~~~~~~~gg~~~~~~~S~le~L~~~---~~~~~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~ 370 (721)
T 3ayj_A 295 VDESISYYVEL-FGRFGFGTGGFKPLYNISLVEMMRLI---LWDYSNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVR 370 (721)
T ss_dssp HHHHHHHHHHH-HHHHCSSSSCCGGGTTBBHHHHHHHH---HTTTTCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred hccccHHHHHH-HHHHhhccCCCCCccchhHHHHHHHH---hcCCccceeEECCcHHHHHHHHHHhcccCCceEeCCEEE
Confidence 1 0000 0000 111110 000111112111111 0122445678999999999999874 4699999999
Q ss_pred --EEEecCCc-------EEEEE--CCE--EEEecEEEEcCChhhHhh----cccc-------C--------------CCC
Q 004458 379 --TIKYGNEG-------VEVIA--GDQ--MFQADMVLCTVPLGVLKE----KTIK-------F--------------EPE 420 (752)
Q Consensus 379 --~I~~~~~g-------v~V~~--~g~--~~~AD~VV~AvPl~vLk~----~~i~-------f--------------~P~ 420 (752)
+|...+++ |+|++ +|+ +++||+||+|+|+++|.. ..+. + .|+
T Consensus 371 ~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pp 450 (721)
T 3ayj_A 371 QERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPP 450 (721)
T ss_dssp CEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCS
T ss_pred eeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCc
Confidence 99987655 88843 565 799999999999999963 2344 3 354
Q ss_pred -C-c-------HHHHHHHHhcCCccEEEEEEEe-----cCcccccCCC-cceeeccCCCCCceEEEEe----eccccCCC
Q 004458 421 -L-P-------QRKVAAIDRLGFGLLNKVAMVF-----PYVFWGEELD-TFGCLNEQSSKRGEFFLFY----GYHTVSGG 481 (752)
Q Consensus 421 -L-p-------~~k~~ai~~l~~g~~~kV~L~f-----d~~fW~~~~~-~fg~l~~~~~~~~~~~~~~----~~~~~~g~ 481 (752)
| | ..+.++|++++|++.+||++.| +++||+.+.. ..+....+...+..++..+ ++..+..+
T Consensus 451 lLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~g 530 (721)
T 3ayj_A 451 LLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYS 530 (721)
T ss_dssp SCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEE
T ss_pred ccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCCCCCc
Confidence 6 9 9999999999999999999999 9999987621 1122333333232222111 23333345
Q ss_pred cEEEEEeccchhhhh------ccCCHHHH-------HHHHHHHHH--HhcCCCC-----------CCCCCCeeEEEEecC
Q 004458 482 PVLNALVAGEAAKTF------ESMDPSFL-------LHRVLNVLR--GIYNPKG-----------IDVPDPLQTICTRWG 535 (752)
Q Consensus 482 ~vL~~~~~g~~a~~~------~~lsdeel-------~~~vl~~L~--~if~~~~-----------~~vp~p~~~~v~rW~ 535 (752)
.+|.+|++++.+..| ..+++++. ++.+++.|. .+||... ..+ .+.+++..+|.
T Consensus 531 vlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~-~~~~~~~~dW~ 609 (721)
T 3ayj_A 531 SLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEA-RTADRFVFDWT 609 (721)
T ss_dssp EEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTS-CSTTCEEEEGG
T ss_pred EEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhc-ccCceEEEeCC
Confidence 578899999999988 66666666 999999999 8887431 001 13456888999
Q ss_pred CCCCCCCCCCCCcccCCC-----Cch---HHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhccC
Q 004458 536 SDPFTHGSYSHVRVRSSG-----SDY---DILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQK 604 (752)
Q Consensus 536 ~dp~~~Gsys~~~pg~~~-----~~~---~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~~ 604 (752)
.+| +.|+|..+.||+.. ..| ..+.+|. +|||||||+++. ++||+|||+.||++||..|+..++...
T Consensus 610 ~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~-gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 610 TNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLD-NRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp GST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTC-CCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCC-CCCccccCCCccchhhhhhhhhhhhccccCCC-CCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 999 99999999999721 111 1123344 899999999995 789999999999999999999997643
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2e-35 Score=337.76 Aligned_cols=414 Identities=18% Similarity=0.205 Sum_probs=271.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIP 240 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~ 240 (752)
+.++|+|||||++||+||++|++.|++|+|+|+++++||+++|++.+| +.+|.|++++.+.+ +.+..+++++|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g----~~~~~g~~~~~~~~-~~~~~~~~~lgl~ 86 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG----LIWDEGANTMTESE-GDVTFLIDSLGLR 86 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT----EEEESSCCCBCCCS-HHHHHHHHHTTCG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC----eEEecCCcccccCc-HHHHHHHHHcCCc
Confidence 357999999999999999999999999999999999999999999875 88999999998754 4678899999997
Q ss_pred ccccc---CCCceecCCCccccccchHH--HHHH---HHHHHHHH-HHHHHHh----cCCCCCCCHHHHHHHHHHHHHhh
Q 004458 241 LHKVR---DNCPLYKPDGAPVNKEIDSK--VEFI---FNKLLDKV-MELRKIK----GGFANDVSLGSVLETLRQLYAVA 307 (752)
Q Consensus 241 ~~~~~---~~~~~~~~~G~~~~~~~~~~--~~~~---~~~ll~~~-~~~~~~~----~~~~~~~sl~e~l~~l~~~~~~~ 307 (752)
..... ....++..+|+.++.+.+.. +... +...+... ..+.... .....+.|+.+|++...
T Consensus 87 ~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~------ 160 (504)
T 1sez_A 87 EKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHF------ 160 (504)
T ss_dssp GGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHH------
T ss_pred ccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHHc------
Confidence 54322 12234456777654433211 0000 00000000 0000000 01134689999887521
Q ss_pred CCHHHHHHHHHHHHhhhhccCCCchh--------------------hhhhccccC-C----------CccCCCCceecCC
Q 004458 308 RSTEERELLDWHLANLEYANAGCLSD--------------------LSATYWDQD-D----------PYEMGGDHCFLAG 356 (752)
Q Consensus 308 ~s~~~~~~l~~~~~~le~~~~~~l~~--------------------ls~~~~~~~-~----------~~~~~g~~~~~~g 356 (752)
.++....++.+............++. +........ . .....+..++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 240 (504)
T 1sez_A 161 GKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLG 240 (504)
T ss_dssp CHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETT
T ss_pred CHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCc
Confidence 11122222222221111110011100 000000000 0 0001234678899
Q ss_pred CHHHHHHHHHcCC---cEEcCceEEEEEecCCc------EEEEE---CC---EEEEecEEEEcCChhhHhhccc-cCCCC
Q 004458 357 GNWRLIKALCEGV---PIFYEKTVNTIKYGNEG------VEVIA---GD---QMFQADMVLCTVPLGVLKEKTI-KFEPE 420 (752)
Q Consensus 357 G~~~L~~aLa~gl---~I~ln~~V~~I~~~~~g------v~V~~---~g---~~~~AD~VV~AvPl~vLk~~~i-~f~P~ 420 (752)
|+++|+++|++.+ +|++|++|++|..++++ +.|+. +| +++.||+||+|+|+.+++++.. ...++
T Consensus 241 G~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~ 320 (504)
T 1sez_A 241 GMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNP 320 (504)
T ss_dssp CTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSB
T ss_pred HHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCc
Confidence 9999999999854 69999999999998887 77754 34 5789999999999999986432 11133
Q ss_pred CcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCC------CceEEE--EeeccccCCCcEEEEEeccch
Q 004458 421 LPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSK------RGEFFL--FYGYHTVSGGPVLNALVAGEA 492 (752)
Q Consensus 421 Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~------~~~~~~--~~~~~~~~g~~vL~~~~~g~~ 492 (752)
+++. .++++.++++.+|++.|++++|+...+.|+.+.+.... .+..+. +++...|++..+|++|+.|+.
T Consensus 321 ~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~ 397 (504)
T 1sez_A 321 FLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSR 397 (504)
T ss_dssp CCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTT
T ss_pred ccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCC
Confidence 4332 26778899999999999999998776777776654321 111111 233345667778899999888
Q ss_pred hhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCC--CchHHhhcccCCcEEEe
Q 004458 493 AKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSG--SDYDILAESVGSRLFFA 570 (752)
Q Consensus 493 a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~--~~~~~l~~pv~~~L~fA 570 (752)
+..+..++++++++.++++|++++|.. ..|....+++|... |..+.+|+.. ..+....+|+ +|||||
T Consensus 398 ~~~~~~~~~ee~~~~v~~~L~~~~g~~----~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~~-~~l~~a 466 (504)
T 1sez_A 398 NRELAKASRTELKEIVTSDLKQLLGAE----GEPTYVNHLYWSKA------FPLYGHNYDSVLDAIDKMEKNL-PGLFYA 466 (504)
T ss_dssp CGGGTTCCHHHHHHHHHHHHHHHHCBC----SCCSSEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHS-TTEEEC
T ss_pred cccccCCCHHHHHHHHHHHHHHHhCCC----CCCeEEEEeECCCC------CCccCcCHHHHHHHHHHHHHhC-CCEEEE
Confidence 888899999999999999999999853 35778888999753 1122233210 1123345677 899999
Q ss_pred cccccCcCCcchHHHHHHHHHHHHHHHHHhhc
Q 004458 571 GEATTRQYPATMHGAYLSGLREASRILRATRV 602 (752)
Q Consensus 571 Ge~ts~~~~g~veGAl~SG~rAA~~Il~~l~~ 602 (752)
|++++ +.+|+||+.||.+||++|+..++.
T Consensus 467 G~~~~---g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 467 GNHRG---GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp CSSSS---CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred eecCC---CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99986 368999999999999999998854
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=3e-35 Score=333.75 Aligned_cols=408 Identities=18% Similarity=0.159 Sum_probs=273.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLS 238 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LG 238 (752)
.+++|+|||||++||+||++|++.| ++|+|||+++++||+++|.+..+ +.+|.|++++...+. .+..+++++|
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----~~~~~g~~~~~~~~~-~~~~l~~~lg 77 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----FTIERGPDSYVARKH-ILTDLIEAIG 77 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT----CCEESSCCCEETTST-HHHHHHHHTT
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC----EEEecCchhhhcccH-HHHHHHHHcC
Confidence 4579999999999999999999999 99999999999999999998865 789999999987754 5788999999
Q ss_pred CCccccc--CCCceecCCCccccccchH------HHHHHHH----HHHH--HHHHHHHHhcC----CCCCCCHHHHHHHH
Q 004458 239 IPLHKVR--DNCPLYKPDGAPVNKEIDS------KVEFIFN----KLLD--KVMELRKIKGG----FANDVSLGSVLETL 300 (752)
Q Consensus 239 l~~~~~~--~~~~~~~~~G~~~~~~~~~------~~~~~~~----~ll~--~~~~~~~~~~~----~~~~~sl~e~l~~l 300 (752)
++..... ....+++.+|+....+... .+...+. .... ....+...... ..++.++.+|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 157 (475)
T 3lov_A 78 LGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQEVADLLLHPSDSLRIPEQDIPLGEYLRPR 157 (475)
T ss_dssp CGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHHHHHHHHHSCCTTCCCCSSCCBHHHHHHHH
T ss_pred CcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHHHhhCcccCCcccccCCCCCcCHHHHHHHH
Confidence 9765432 2223333455543322110 0000000 0000 11111111111 34578999988752
Q ss_pred HHHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhh----------------hccccC----------CCccCCCCceec
Q 004458 301 RQLYAVARSTEERELLDWHLANLEYANAGCLSDLSA----------------TYWDQD----------DPYEMGGDHCFL 354 (752)
Q Consensus 301 ~~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~----------------~~~~~~----------~~~~~~g~~~~~ 354 (752)
+ .......++.+............++.... ...... .....++.++.+
T Consensus 158 --~----~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (475)
T 3lov_A 158 --L----GDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSL 231 (475)
T ss_dssp --H----CHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEE
T ss_pred --h----CHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEee
Confidence 1 11222333333333222222111111000 000000 000124567889
Q ss_pred CCCHHHHHHHHHcCC---cEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHH
Q 004458 355 AGGNWRLIKALCEGV---PIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAID 430 (752)
Q Consensus 355 ~gG~~~L~~aLa~gl---~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~ 430 (752)
++|++.++++|++.+ +|++|++|++|+.++++|.|++ +| ++.||+||+|+|+.+++++ .+.|++ ++++
T Consensus 232 ~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~l--l~~~~~-----~~~~ 303 (475)
T 3lov_A 232 ETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQL--LPDAHL-----PELE 303 (475)
T ss_dssp TTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHH--CTTSCC-----HHHH
T ss_pred CChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHH--cCccCH-----HHHh
Confidence 999999999999866 7999999999999999999987 56 8999999999999999863 344444 7889
Q ss_pred hcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEee-----ccccCCCcEEEEEeccchhhhhccCCHHHHH
Q 004458 431 RLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYG-----YHTVSGGPVLNALVAGEAAKTFESMDPSFLL 505 (752)
Q Consensus 431 ~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~-----~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~ 505 (752)
++.|+++.+|++.|+++| +.+.+.+|++.+.........+.++ ...|. ..++.+++.++.+..+..+++++++
T Consensus 304 ~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~ 381 (475)
T 3lov_A 304 QLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQ 381 (475)
T ss_dssp TCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHH
T ss_pred cCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHH
Confidence 999999999999999998 4455678887765433222222222 22333 5678888887777788899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCC---CCchHHhhcccCCcEEEecccccCcCCcch
Q 004458 506 HRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSS---GSDYDILAESVGSRLFFAGEATTRQYPATM 582 (752)
Q Consensus 506 ~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~---~~~~~~l~~pv~~~L~fAGe~ts~~~~g~v 582 (752)
+.++++|+++||.. +.|....+++|.... ..| .+|+. ....+.+.+|+ +||||||+++.. .+|
T Consensus 382 ~~~~~~L~~~~g~~----~~p~~~~v~~w~~a~---p~~---~~g~~~~~~~~~~~l~~~~-~~l~~aG~~~~g---~g~ 447 (475)
T 3lov_A 382 QAVLQDLEKICGRT----LEPKQVIISRLMDGL---PAY---TVGHADRIQRVREEVLAQY-PGIYLAGLAYDG---VGL 447 (475)
T ss_dssp HHHHHHHHHHHSSC----CCCSEEEEEEEEEEE---ECC---CTTHHHHHHHHHHHHHHHS-TTEEECSTTTSC---SSH
T ss_pred HHHHHHHHHHhCCC----CCCeEEEEEEcccCC---CCC---CCChHHHHHHHHHHHHhhC-CCEEEEccCCCC---CCH
Confidence 99999999999853 478889999998741 112 23321 11224466677 899999999863 569
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 004458 583 HGAYLSGLREASRILRATRVQ 603 (752)
Q Consensus 583 eGAl~SG~rAA~~Il~~l~~~ 603 (752)
+||+.||.++|++|++.++..
T Consensus 448 ~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 448 PDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp HHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999987554
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=315.72 Aligned_cols=405 Identities=20% Similarity=0.194 Sum_probs=263.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCC--CccHHHHHHHHc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGI--HANPLGVLARQL 237 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~--~~n~l~~L~~~L 237 (752)
++||+|||||++||+||++|++.|+ +|+|||+++++||+++|....+ ++.+|.|++++... ....+..+++++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~---g~~~d~G~~~~~~~~~~~~~~~~l~~~l 78 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPN---GAIFELGPRGIRPAGALGARTLLLVSEL 78 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTT---SCEEESSCCCBCCCHHHHHHHHHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccC---CeEEEeCCCcccCCCcccHHHHHHHHHc
Confidence 3699999999999999999999999 9999999999999999987652 27999999998654 234577899999
Q ss_pred CCCcccccC--C-----CceecCCCccccccchH--HHH-------HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Q 004458 238 SIPLHKVRD--N-----CPLYKPDGAPVNKEIDS--KVE-------FIFNKLLDKVMELRKIKGGFANDVSLGSVLETLR 301 (752)
Q Consensus 238 Gl~~~~~~~--~-----~~~~~~~G~~~~~~~~~--~~~-------~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~ 301 (752)
|++...... . ..+.+.+|+....+... ... ..+...+.. +.. .....++.++.+|++...
T Consensus 79 gl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~s~~~~~~~~~ 154 (477)
T 3nks_A 79 GLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRE---LTK-PRGKEPDETVHSFAQRRL 154 (477)
T ss_dssp TCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHTT---TTS-CCCCSSCCBHHHHHHHHH
T ss_pred CCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHHh---hhc-CCCCCCCcCHHHHHHHhh
Confidence 997443211 1 12333455543221110 000 000011100 000 011235678888887511
Q ss_pred HHHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhh--ccc--------------c--CCC----------ccCCCCcee
Q 004458 302 QLYAVARSTEERELLDWHLANLEYANAGCLSDLSAT--YWD--------------Q--DDP----------YEMGGDHCF 353 (752)
Q Consensus 302 ~~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~--~~~--------------~--~~~----------~~~~g~~~~ 353 (752)
.......++.+............++..... .+. . ..+ ....+..+.
T Consensus 155 ------g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (477)
T 3nks_A 155 ------GPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWS 228 (477)
T ss_dssp ------CHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEE
T ss_pred ------CHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEE
Confidence 111112222222221111111111110000 000 0 000 011235678
Q ss_pred cCCCHHHHHHHHHc-----CCcEEcCceEEEEEecCCc-EEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHH
Q 004458 354 LAGGNWRLIKALCE-----GVPIFYEKTVNTIKYGNEG-VEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVA 427 (752)
Q Consensus 354 ~~gG~~~L~~aLa~-----gl~I~ln~~V~~I~~~~~g-v~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ 427 (752)
++||++.++++|++ |++|++|++|++|..++++ |.|+++++++.||+||+|+|+..+.++ .|++++...+
T Consensus 229 ~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~~~~~l----l~~~~~~~~~ 304 (477)
T 3nks_A 229 LRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSEL----LPAEAAPLAR 304 (477)
T ss_dssp ETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHHHHHHH----SCGGGHHHHH
T ss_pred ECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHHHHHHh----ccccCHHHHH
Confidence 99999999999876 6799999999999998877 888877788999999999999998753 3455667888
Q ss_pred HHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeecc------ccCCCcEEEEEeccchhhhhc----
Q 004458 428 AIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYH------TVSGGPVLNALVAGEAAKTFE---- 497 (752)
Q Consensus 428 ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~------~~~g~~vL~~~~~g~~a~~~~---- 497 (752)
++.++.|.++.+|++.|++++|+. +.||++.+...........++.. .+++..+|++++.|+.+..+.
T Consensus 305 ~l~~~~~~~~~~v~l~~~~~~~~~--~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~ 382 (477)
T 3nks_A 305 ALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGC 382 (477)
T ss_dssp HHHTCCEEEEEEEEEEETTCCCSS--CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSC
T ss_pred HHhcCCCCcEEEEEEEECCCCCCC--CCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccC
Confidence 999999999999999999999953 46788876544333333333221 123667888888877665553
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCC---chHHhhcccCCcEEEecccc
Q 004458 498 SMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGS---DYDILAESVGSRLFFAGEAT 574 (752)
Q Consensus 498 ~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~---~~~~l~~pv~~~L~fAGe~t 574 (752)
.++++++++.++++|++++|.. +.|....+++|.. ++..+.+|+... ..+.+.+. .++|||||+++
T Consensus 383 ~~~~~~~~~~~~~~L~~~~g~~----~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~-~~~l~l~G~~~ 451 (477)
T 3nks_A 383 VLSQELFQQRAQEAAATQLGLK----EMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAH-RLPLTLAGASY 451 (477)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCC----SCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHT-TCSEEECSTTT
T ss_pred CCCHHHHHHHHHHHHHHHhCCC----CCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhc-CCCEEEEccCC
Confidence 4699999999999999999752 5788888899975 222233443211 11122222 26899999998
Q ss_pred cCcCCcchHHHHHHHHHHHHHHHHH
Q 004458 575 TRQYPATMHGAYLSGLREASRILRA 599 (752)
Q Consensus 575 s~~~~g~veGAl~SG~rAA~~Il~~ 599 (752)
. ..+|++|+.||.+||++|+..
T Consensus 452 ~---G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 452 E---GVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp S---CCSHHHHHHHHHHHHHHHHHC
T ss_pred C---CCcHHHHHHHHHHHHHHHHhc
Confidence 5 356999999999999999864
No 18
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.9e-31 Score=297.66 Aligned_cols=401 Identities=15% Similarity=0.091 Sum_probs=251.6
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcC-CCccHHHHHHHHcCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITG-IHANPLGVLARQLSIPL 241 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~-~~~n~l~~L~~~LGl~~ 241 (752)
+||+|||||++||+||++|++.|++|+|||+++++||++.++..+| +.+|.|++++.. ...+++..+++++|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G----~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 76 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG----FQLSSGAFHMLPNGPGGPLACFLKEVEASV 76 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----EEEESSSCSCBTTGGGSHHHHHHHHTTCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----cEEcCCCceEecCCCccHHHHHHHHhCCCc
Confidence 5899999999999999999999999999999999999999998876 899999866543 34457889999999875
Q ss_pred ccccCCCce-ec--C--------CCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCH
Q 004458 242 HKVRDNCPL-YK--P--------DGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQLYAVARST 310 (752)
Q Consensus 242 ~~~~~~~~~-~~--~--------~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~ 310 (752)
......... +. . .++....+...... .+.........+.........+.++.+++... ...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~~~~ 149 (425)
T 3ka7_A 77 NIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLL-SYKDRMKIALLIVSTRKNRPSGSSLQAWIKSQ------VSDE 149 (425)
T ss_dssp CEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGS-CHHHHHHHHHHHHHTTTSCCCSSBHHHHHHHH------CCCH
T ss_pred eEEecCCceEEeecCCCcccccccccceehhhhhhhC-CHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHh------cCCH
Confidence 433221111 11 1 12222111100000 00000111111111111334678888888752 2344
Q ss_pred HHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHc-----CCcEEcCceEEEEEecCC
Q 004458 311 EERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCE-----GVPIFYEKTVNTIKYGNE 385 (752)
Q Consensus 311 ~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~-----gl~I~ln~~V~~I~~~~~ 385 (752)
....++..............++......... .....+...++.||++.++++|++ |++|++|++|++|..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~ 227 (425)
T 3ka7_A 150 WLIKFADSFCGWALSLKSDEVPVEEVFEIIE--NMYRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENG 227 (425)
T ss_dssp HHHHHHHHHHHHHHSSCGGGSBHHHHHHHHH--HHHHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT
T ss_pred HHHHHHHHHHHHHhCCCcccchHHHHHHHHH--HHHhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECC
Confidence 4444444333221111111111100000000 001123456789999999998876 789999999999999988
Q ss_pred cEE-EEECCEEEEecEEEEcCChhhHhhccccCCCCC--cHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccC
Q 004458 386 GVE-VIAGDQMFQADMVLCTVPLGVLKEKTIKFEPEL--PQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQ 462 (752)
Q Consensus 386 gv~-V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~L--p~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~ 462 (752)
++. |+++|+++.||.||+|+|+..+.++ +...+.+ |+...+.++++.+++..++++.|++++|.. ++.+...
T Consensus 228 ~~~gv~~~g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~~~~~ 302 (425)
T 3ka7_A 228 KAAGIIADDRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH----TGVLLTP 302 (425)
T ss_dssp EEEEEEETTEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS----SSEEECC
T ss_pred EEEEEEECCEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc----CEEEECC
Confidence 887 7778999999999999999998763 3333334 788889999999999999999999987632 2333322
Q ss_pred CCCCceEEEEe----eccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCC
Q 004458 463 SSKRGEFFLFY----GYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDP 538 (752)
Q Consensus 463 ~~~~~~~~~~~----~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp 538 (752)
.......+.+. +..+|+|..++.+++.... .. .+. +++.++.++++|+++||.. .+....+++|...
T Consensus 303 ~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~~-~~~-~~~~~~~~~~~l~~~~p~~-----~~~~~~v~~~~~~- 373 (425)
T 3ka7_A 303 YTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-EN-VKN-LESEIEMGLEDLKEIFPGK-----RYEVLLIQSYHDE- 373 (425)
T ss_dssp SSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-GG-GGG-HHHHHHHHHHHHHHHSTTC-----CEEEEEEEEEBTT-
T ss_pred ChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-cc-ccc-hHHHHHHHHHHHHHhCCCC-----ceEEEEEEEECCC-
Confidence 22111112222 2345677777776654321 11 112 3456799999999999742 3444467788752
Q ss_pred CCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHH
Q 004458 539 FTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILR 598 (752)
Q Consensus 539 ~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~ 598 (752)
+....++. ..++....|+ +|||+||+++...++.+|+||+.||++||++|+.
T Consensus 374 -----~P~~~~~~--~~~~~~~~p~-~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 374 -----WPVNRAAS--GTDPGNETPF-SGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp -----BCSBSSCT--TCCCCSBCSS-BTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred -----cccccccc--CCCCCCCCCc-CCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 22223332 1223345566 7999999999976778999999999999999873
No 19
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.98 E-value=1.1e-30 Score=298.19 Aligned_cols=418 Identities=18% Similarity=0.171 Sum_probs=211.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
+++|||||||++||+||++|+++|++|+|||+++++||+++|++.+| +.+|.|++++.+. ..+..+++.+|..+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G----~~~D~G~~~~~~~--~~~~~l~~~~g~~~ 74 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQG----FTFDAGPTVITDP--SAIEELFALAGKQL 74 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETT----EEEECSCCCBSCT--HHHHHHHHTTTCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCC----EEEecCceeecCc--hhHHHHHHHhcchh
Confidence 46899999999999999999999999999999999999999999876 8999999998754 35677788887543
Q ss_pred c------cccCCCceecCCCccccccchHH-HHH-----------HHHHHHHHHHHHHHHhcCC------CCCCCHHHHH
Q 004458 242 H------KVRDNCPLYKPDGAPVNKEIDSK-VEF-----------IFNKLLDKVMELRKIKGGF------ANDVSLGSVL 297 (752)
Q Consensus 242 ~------~~~~~~~~~~~~G~~~~~~~~~~-~~~-----------~~~~ll~~~~~~~~~~~~~------~~~~sl~e~l 297 (752)
. +......+++.+|+.+....+.. +.. .+.++++.. +...... ....++.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 151 (501)
T 4dgk_A 75 KEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYS---RAVFKEGYLKLGTVPFLSFRDML 151 (501)
T ss_dssp GGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHH---HHHTSSSCC--CCCCCCCHHHHH
T ss_pred hhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHH---HHhhhhhhhhccccccchhhhhh
Confidence 2 22333345567777665443321 111 111222211 1111110 1223444433
Q ss_pred HH------------HHH-HHHhhCCHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHH
Q 004458 298 ET------------LRQ-LYAVARSTEERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKA 364 (752)
Q Consensus 298 ~~------------l~~-~~~~~~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~a 364 (752)
.. +.. +.....++..+.++.+...............+....+ .....+.++++||+++|+++
T Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~-----~~~~~G~~~p~GG~~~l~~a 226 (501)
T 4dgk_A 152 RAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHA-----LEREWGVWFPRGGTGALVQG 226 (501)
T ss_dssp HSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHH-----HHSCCCEEEETTHHHHHHHH
T ss_pred hhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhh-----hhccCCeEEeCCCCcchHHH
Confidence 21 111 1122445666666654432221111111111111111 11233456899999999999
Q ss_pred HHc-----CCcEEcCceEEEEEecCCcEE-EEE-CCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCc-c
Q 004458 365 LCE-----GVPIFYEKTVNTIKYGNEGVE-VIA-GDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFG-L 436 (752)
Q Consensus 365 La~-----gl~I~ln~~V~~I~~~~~gv~-V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g-~ 436 (752)
|++ |++|++|++|++|..++++++ |++ +|+++.||+||+++++..+....+. ..+++....+.+++..++ +
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~s 305 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS-QHPAAVKQSNKLQTKRMSNS 305 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------------------------CCE
T ss_pred HHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc-ccccchhhhhhhhccccCCc
Confidence 976 789999999999999999887 655 8999999999999977765432222 223455556667777665 5
Q ss_pred EEEEEEEecCcccccCCCcceeeccC-------------CCCCceEEEEe-----eccccCCCcEEEEEeccchhhhhcc
Q 004458 437 LNKVAMVFPYVFWGEELDTFGCLNEQ-------------SSKRGEFFLFY-----GYHTVSGGPVLNALVAGEAAKTFES 498 (752)
Q Consensus 437 ~~kV~L~fd~~fW~~~~~~fg~l~~~-------------~~~~~~~~~~~-----~~~~~~g~~vL~~~~~g~~a~~~~~ 498 (752)
..++++.++......... .-++.++ ......+++.. +..+|+|...+..++..+.. .+.+
T Consensus 306 ~~~~~~~l~~~~~~l~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~-~~~~ 383 (501)
T 4dgk_A 306 LFVLYFGLNHHHDQLAHH-TVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHL-GTAN 383 (501)
T ss_dssp EEEEEEEESSCCTTSCSE-EEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCT-TTSC
T ss_pred eeEEEecccCCccccccc-eeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCcc-cccc
Confidence 778888888764221110 0001100 00111122221 12356677777666532211 1222
Q ss_pred CC----HHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEe-------cCCCC-CCCCCCCCCcc--cCCCCchHH-hhccc
Q 004458 499 MD----PSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTR-------WGSDP-FTHGSYSHVRV--RSSGSDYDI-LAESV 563 (752)
Q Consensus 499 ls----deel~~~vl~~L~~if~~~~~~vp~p~~~~v~r-------W~~dp-~~~Gsys~~~p--g~~~~~~~~-l~~pv 563 (752)
.+ .+++.+++++.|++.+.| ...+.++.+ |.... ...|+.....+ .+....++. ..+|+
T Consensus 384 ~~~~~~~~~~~~~vl~~l~~~~~P------~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i 457 (501)
T 4dgk_A 384 LDWTVEGPKLRDRIFAYLEQHYMP------GLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTI 457 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCT------THHHHEEEEEEECTTTTC------------------------------CC
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCC------ChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCC
Confidence 22 456778889999876533 112212222 22211 11232211111 111111221 23677
Q ss_pred CCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhccCC
Q 004458 564 GSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQKY 605 (752)
Q Consensus 564 ~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~~~ 605 (752)
+||||||++|.+ +++++||+.||..||+.|+++++.++.
T Consensus 458 -~gLyl~G~~t~p--G~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 458 -TNLYLVGAGTHP--GAGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp -TTEEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred -CCEEEECCCCCC--cccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 899999999964 367999999999999999999977654
No 20
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.98 E-value=8.4e-31 Score=284.60 Aligned_cols=327 Identities=17% Similarity=0.197 Sum_probs=229.9
Q ss_pred CcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSI 239 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl 239 (752)
+||+|||||++||+||+.|++ .|++|+|||+++.+||++.+.+.... ....+|.|+.++...... .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~-~~~~~d~g~~~~~~~~~~-~--------- 70 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHN-PQCTADLGAQYITCTPHY-A--------- 70 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSC-TTCEEESSCCCEEECSSH-H---------
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCC-CCceEecCCceEEcCchH-H---------
Confidence 589999999999999999999 99999999999999999998876431 124677776655432110 0
Q ss_pred CcccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 004458 240 PLHKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQLYAVARSTEERELLDWH 319 (752)
Q Consensus 240 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~ 319 (752)
..+..+++ .+... ..
T Consensus 71 ----------------------------~~~~~~~~---~~~~~--g~-------------------------------- 85 (342)
T 3qj4_A 71 ----------------------------KKHQRFYD---ELLAY--GV-------------------------------- 85 (342)
T ss_dssp ----------------------------HHTHHHHH---HHHHT--TS--------------------------------
T ss_pred ----------------------------HHHHHHHH---HHHhC--CC--------------------------------
Confidence 00000000 00000 00
Q ss_pred HHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHc--CCcEEcCceEEEEEecCCcEEEEE-CCEEE
Q 004458 320 LANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCE--GVPIFYEKTVNTIKYGNEGVEVIA-GDQMF 396 (752)
Q Consensus 320 ~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~--gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~ 396 (752)
... ...... ..........+...+|++.++++|++ |++|+++++|++|..++++|+|++ +|+++
T Consensus 86 ---~~~-~~~~~~---------~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~ 152 (342)
T 3qj4_A 86 ---LRP-LSSPIE---------GMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPE 152 (342)
T ss_dssp ---CEE-CCSCEE---------TCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCE
T ss_pred ---eec-Cchhhc---------ceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEE
Confidence 000 000000 00000112346778999999999998 899999999999999999999987 67778
Q ss_pred EecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeecc
Q 004458 397 QADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYH 476 (752)
Q Consensus 397 ~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~ 476 (752)
.||+||+|+|+..+.++...+.|+||+...++++++.|++..+|++.|+++||.+. +.+|.+.++.. ...+++++..
T Consensus 153 ~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~~--~~~~~~~~~~ 229 (342)
T 3qj4_A 153 QFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSNP--CIRFVSIDNK 229 (342)
T ss_dssp EESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSCS--SEEEEEEHHH
T ss_pred EcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCCc--ceEEEEcccc
Confidence 99999999999998865444567789999999999999999999999999988643 45676665322 1223444443
Q ss_pred cc-----CCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCC-ccc
Q 004458 477 TV-----SGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHV-RVR 550 (752)
Q Consensus 477 ~~-----~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~-~pg 550 (752)
.+ +++.+++.++.++.+..+.+++++++++.++++|++++|. .+.|..+.++||... ...|... .++
T Consensus 230 k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~----~~~p~~~~v~rW~~a---~p~~~~~~~~~ 302 (342)
T 3qj4_A 230 KRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPG----LPQPIATKCQKWRHS---QVTNAAANCPG 302 (342)
T ss_dssp HTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCS----CCCCSEEEEEEETTC---SBSSCCSSSCS
T ss_pred CCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccC----CCCCceeeecccccc---ccccccCCCcc
Confidence 33 2345788888888888888999999999999999999973 468899999999842 2222110 111
Q ss_pred CCCCchHHhh-cccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHH
Q 004458 551 SSGSDYDILA-ESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRA 599 (752)
Q Consensus 551 ~~~~~~~~l~-~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~ 599 (752)
.+. .+. ++|++||||+. .+++|+|+.||.+||++|++.
T Consensus 303 -------~~~~~~~-~~l~laGd~~~---g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 303 -------QMTLHHK-PFLACGGDGFT---QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp -------CEEEETT-TEEEECSGGGS---CSSHHHHHHHHHHHHHHHTTC
T ss_pred -------eeEecCC-ccEEEEccccC---CCCccHHHHHHHHHHHHHHhh
Confidence 122 233 79999999996 479999999999999999764
No 21
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.97 E-value=1e-30 Score=298.73 Aligned_cols=410 Identities=12% Similarity=0.084 Sum_probs=247.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHh-CCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSI 239 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl 239 (752)
..+||||||||+|||+||++|++ .|++|+|||+++++||+++|....+ ++.+|.|+|++...+. .+..++++++.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~---G~~~D~G~h~~~~~~~-~v~~l~~e~~~ 84 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPE---GFLYDVGGHVIFSHYK-YFDDCLDEALP 84 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTT---SCEEESSCCCCCCCBH-HHHHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecC---CEEEEeCceEecCCCH-HHHHHHHHhCC
Confidence 46899999999999999999998 4999999999999999999975432 2899999999987654 47778888876
Q ss_pred Cccccc--CCCceecCCCccccccchHHHH----HHHHHHH-HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHH
Q 004458 240 PLHKVR--DNCPLYKPDGAPVNKEIDSKVE----FIFNKLL-DKVMELRKIKGGFANDVSLGSVLETLRQLYAVARSTEE 312 (752)
Q Consensus 240 ~~~~~~--~~~~~~~~~G~~~~~~~~~~~~----~~~~~ll-~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~ 312 (752)
....+. .....++.+|+.++.+....+. ....... ...............+.++.+|+..... . ...
T Consensus 85 ~~~~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g--~----~l~ 158 (513)
T 4gde_A 85 KEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMG--T----GIA 158 (513)
T ss_dssp SGGGEEEEECCEEEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHHHH--H----HHH
T ss_pred ccceeEEecCceEEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHhhh--h----hhh
Confidence 543322 2333445677766544322111 1111111 1111112222334567789888754211 0 001
Q ss_pred HHHHHHHHHhhhhccCCCch--------------hhh--hhccccCCCccCC-CCceecCCCHHHHHHHHHcC-----Cc
Q 004458 313 RELLDWHLANLEYANAGCLS--------------DLS--ATYWDQDDPYEMG-GDHCFLAGGNWRLIKALCEG-----VP 370 (752)
Q Consensus 313 ~~~l~~~~~~le~~~~~~l~--------------~ls--~~~~~~~~~~~~~-g~~~~~~gG~~~L~~aLa~g-----l~ 370 (752)
..++......+.......++ ... .........+... ...+.++||+++++++|++. ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~ 238 (513)
T 4gde_A 159 DLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTR 238 (513)
T ss_dssp HHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEE
T ss_pred hhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhcCee
Confidence 11111111111111100000 000 0000011111111 12344689999999999874 46
Q ss_pred EEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccc
Q 004458 371 IFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWG 450 (752)
Q Consensus 371 I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~ 450 (752)
|++|++|++|..+++.++ ..+|+++.||+||+|+|+..|.+.. + ++....+...+.|.++..|.+.++...+.
T Consensus 239 i~~~~~V~~I~~~~~~v~-~~~G~~~~ad~vI~t~P~~~l~~~l----~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~ 311 (513)
T 4gde_A 239 FGEKGKVTKVNANNKTVT-LQDGTTIGYKKLVSTMAVDFLAEAM----N--DQELVGLTKQLFYSSTHVIGVGVRGSRPE 311 (513)
T ss_dssp ESGGGCEEEEETTTTEEE-ETTSCEEEEEEEEECSCHHHHHHHT----T--CHHHHHHHTTCCEEEEEEEEEEEESSCCT
T ss_pred eecceEEEEEEccCCEEE-EcCCCEEECCEEEECCCHHHHHHhc----C--chhhHhhhhcccCCceEEEEEEEeccccc
Confidence 999999999998776553 4589999999999999999997632 1 23456778899999999999999866433
Q ss_pred cCCCcceeeccCCCC-------------------CceE--EEEee----ccccCCCcEEEEEeccchhhhhccCCHHHHH
Q 004458 451 EELDTFGCLNEQSSK-------------------RGEF--FLFYG----YHTVSGGPVLNALVAGEAAKTFESMDPSFLL 505 (752)
Q Consensus 451 ~~~~~fg~l~~~~~~-------------------~~~~--~~~~~----~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~ 505 (752)
...+..+....++.. ...+ ..+.+ ...+.+...+.+++.+.....+..+++++++
T Consensus 312 ~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~ 391 (513)
T 4gde_A 312 RIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETIL 391 (513)
T ss_dssp TTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHH
T ss_pred cccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHH
Confidence 222221111111100 0000 01111 1112223345555555555667889999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCC---CchHHhhcccCCcEEEecccccCcCC-cc
Q 004458 506 HRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSG---SDYDILAESVGSRLFFAGEATTRQYP-AT 581 (752)
Q Consensus 506 ~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~---~~~~~l~~pv~~~L~fAGe~ts~~~~-g~ 581 (752)
+.++++|.++.+.. .-+.++...+.||.. + |.....|+.. ...+.+.. .|||+||-.-...|. ++
T Consensus 392 ~~~~~~L~~~~~i~--~~~~i~~~~v~r~~~---a---yP~y~~~~~~~~~~~~~~l~~---~~l~~~GR~g~~~Y~~~n 460 (513)
T 4gde_A 392 ADCIQGLVNTEMLK--PTDEIVSTYHRRFDH---G---YPTPTLEREGTLTQILPKLQD---KDIWSRGRFGSWRYEVGN 460 (513)
T ss_dssp HHHHHHHHHTTSSC--TTCEEEEEEEEEEEE---E---EECCBTTHHHHHHHHHHHHHH---TTEEECSTTTTCCGGGCS
T ss_pred HHHHHHHHHhcCCC--CccceEEEEEEECCC---e---ecccCHhHHHHHHHHHHHHhh---cCcEEecCCcccCcCCCC
Confidence 99999999998643 223456777888864 1 2222233211 11122322 589999977665564 78
Q ss_pred hHHHHHHHHHHHHHHHH
Q 004458 582 MHGAYLSGLREASRILR 598 (752)
Q Consensus 582 veGAl~SG~rAA~~Il~ 598 (752)
|++|+++|+.||++|+.
T Consensus 461 ~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 461 QDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999999996
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=7.8e-29 Score=276.79 Aligned_cols=389 Identities=15% Similarity=0.106 Sum_probs=236.7
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcC-CCccHHHHHHHHcCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITG-IHANPLGVLARQLSIPL 241 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~-~~~n~l~~L~~~LGl~~ 241 (752)
+||+|||||++||+||++|++.|++|+|||+++++||++.++..+| +.+|.|++++.. ...+.+..+++++|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g----~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 76 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG----FQLSTGALHMIPHGEDGPLAHLLRILGAKV 76 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----EEEESSSCSEETTTTSSHHHHHHHHHTCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----EEEecCCeEEEccCCChHHHHHHHHhCCcc
Confidence 4899999999999999999999999999999999999999999876 899999866543 34457888999999864
Q ss_pred ccc--cCCCceecCCCccccccchHHH--HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHHHHHHH
Q 004458 242 HKV--RDNCPLYKPDGAPVNKEIDSKV--EFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQLYAVARSTEERELLD 317 (752)
Q Consensus 242 ~~~--~~~~~~~~~~G~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~ 317 (752)
... .....++ .+|+.++.+..... ......+.......... ....++.++.+++... ....+....++.
T Consensus 77 ~~~~~~~~~~~~-~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~~-----g~~~~~~~~~~~ 149 (421)
T 3nrn_A 77 EIVNSNPKGKIL-WEGKIFHYRESWKFLSVKEKAKALKLLAEIRMN-KLPKEEIPADEWIKEK-----IGENEFLLSVLE 149 (421)
T ss_dssp CEEECSSSCEEE-ETTEEEEGGGGGGGCC--------CCHHHHHTT-CCCCCCSBHHHHHHHH-----TCCCHHHHHHHH
T ss_pred eEEECCCCeEEE-ECCEEEEcCCchhhCCHhHHHHHHHHHHHHHhc-cCCCCCCCHHHHHHHh-----cCCcHHHHHHHH
Confidence 422 2222333 35554433221100 00000011001111100 1112347888877652 022333334444
Q ss_pred HHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHc-----CCcEEcCceEEEEEecCCcEEEEEC
Q 004458 318 WHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCE-----GVPIFYEKTVNTIKYGNEGVEVIAG 392 (752)
Q Consensus 318 ~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~-----gl~I~ln~~V~~I~~~~~gv~V~~~ 392 (752)
.............++......... .....++.+++.+|++.++++|++ |++|++|++|++|..++++| |+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~ 226 (421)
T 3nrn_A 150 SFAGWADSVSLSDLTALELAKEIR--AALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YTRD 226 (421)
T ss_dssp HHHHHHHSSCGGGSBHHHHHHHHH--HHHHHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EETT
T ss_pred HHHHHhcCCCcccCCHHHHHHHHH--HHhhcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EEeC
Confidence 332221111111111100000000 000113346789999999999875 78999999999999998899 8778
Q ss_pred CEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEE
Q 004458 393 DQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLF 472 (752)
Q Consensus 393 g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~ 472 (752)
|+++.||+||+|+|+..+.++. . .+.+|+...+.++++.+.+..++++.++++..... . -.+.++.. -....+
T Consensus 227 g~~~~ad~Vv~a~~~~~~~~ll-~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~--~-~~~~~~~~--~~~i~~ 299 (421)
T 3nrn_A 227 NEEYSFDVAISNVGVRETVKLI-G-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGN--T-IVFTPGLM--INGFNE 299 (421)
T ss_dssp CCEEECSEEEECSCHHHHHHHH-C-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCS--S-EEECTTSS--SCEEEC
T ss_pred CcEEEeCEEEECCCHHHHHHhc-C-cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCC--e-EEEcCCcc--eeeEec
Confidence 8899999999999999887532 1 24578888889999999999999999998743211 1 12222221 111122
Q ss_pred ----eeccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCc
Q 004458 473 ----YGYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVR 548 (752)
Q Consensus 473 ----~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~ 548 (752)
++..+|+|..++.++... ...++++.++.++++|++++| . .++ ..+++|... ...| ...
T Consensus 300 ~s~~~p~~ap~G~~~~~~~~~~------~~~~~~~~~~~~~~~L~~~~p-~----~~~--~~~~~~~~~---~p~~-~~~ 362 (421)
T 3nrn_A 300 PSALDKSLAREGYTLIMAHMAL------KNGNVKKAIEKGWEELLEIFP-E----GEP--LLAQVYRDG---NPVN-RTR 362 (421)
T ss_dssp GGGTCGGGSCTTEEEEEEEEEC------TTCCHHHHHHHHHHHHHHHCT-T----CEE--EEEEEC--------------
T ss_pred cCCCCCCcCCCCceEEEEEEee------ccccHHHHHHHHHHHHHHHcC-C----CeE--EEeeeccCC---CCcc-ccc
Confidence 222345666666655431 223445669999999999997 2 133 355678641 1111 112
Q ss_pred ccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHH
Q 004458 549 VRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRI 596 (752)
Q Consensus 549 pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~I 596 (752)
++. ..+ ..| +|||+|||++...++-+|+||+.||.+||+.|
T Consensus 363 ~~~---~~~--~~~--~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 363 AGL---HIE--WPL--NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp ------CCC--CCC--SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCC---CCC--CCC--CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 222 111 233 79999999998632336699999999999999
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.97 E-value=4.7e-29 Score=278.59 Aligned_cols=399 Identities=14% Similarity=0.152 Sum_probs=232.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSI 239 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl 239 (752)
+.++|+|||||++||+||++|++.| ++|+|+|+++++|||++|.+..| +.+|.|++++...+ +.+..+++++|+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G----~~~d~G~~~~~~~~-~~~~~l~~~~g~ 79 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG----RRYEMGAIMGVPSY-DTIQEIMDRTGD 79 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT----EECCSSCCCBCTTC-HHHHHHHHHHCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC----cccccCceeecCCc-HHHHHHHHHhCC
Confidence 4679999999999999999999999 99999999999999999998765 78999999987654 457889999999
Q ss_pred CcccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHH-HHhcCC-----------CCCCCHHHHHHHHHHHHHhh
Q 004458 240 PLHKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELR-KIKGGF-----------ANDVSLGSVLETLRQLYAVA 307 (752)
Q Consensus 240 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~-----------~~~~sl~e~l~~l~~~~~~~ 307 (752)
+.........++..+|+......+......+...+.....+. ...... ....|+.++++.. .
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~ 153 (424)
T 2b9w_A 80 KVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALN------G 153 (424)
T ss_dssp CCCSCCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHT------T
T ss_pred ccccccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhh------C
Confidence 865544444455667765422111100000111111111111 100000 1246777777642 1
Q ss_pred CCHHHHHHHHHHHHhhhhccCCCchhhhhhccccC-C-CccCCCCceecCCCHHHHHHHHHcCC--cEEcCceEEEEEec
Q 004458 308 RSTEERELLDWHLANLEYANAGCLSDLSATYWDQD-D-PYEMGGDHCFLAGGNWRLIKALCEGV--PIFYEKTVNTIKYG 383 (752)
Q Consensus 308 ~s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~-~-~~~~~g~~~~~~gG~~~L~~aLa~gl--~I~ln~~V~~I~~~ 383 (752)
.+.....++.+... ..+......+.+....+... . .....+..+.+.+|+++++++|.+.+ +|++|++|++|..+
T Consensus 154 ~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~ 232 (424)
T 2b9w_A 154 CEAARDLWINPFTA-FGYGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRITRE 232 (424)
T ss_dssp CGGGHHHHTTTTCC-CCCCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEECC
T ss_pred cHHHHHHHHHHHHh-hccCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEEE
Confidence 11111111111000 00111111111110000000 0 00012334578999999999998854 79999999999998
Q ss_pred CCcEEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCC
Q 004458 384 NEGVEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQS 463 (752)
Q Consensus 384 ~~gv~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~ 463 (752)
+++|.|++++.++.||+||+|+|+..+. .+.|++|+.+ +.+.++.+.++. +.+.+...|+. ..+.+..+.
T Consensus 233 ~~~v~v~~~~g~~~ad~Vv~a~~~~~~~----~~l~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~ 302 (424)
T 2b9w_A 233 DGKVHIHTTDWDRESDVLVLTVPLEKFL----DYSDADDDER-EYFSKIIHQQYM-VDACLVKEYPT----ISGYVPDNM 302 (424)
T ss_dssp TTCEEEEESSCEEEESEEEECSCHHHHT----TSBCCCHHHH-HHHTTCEEEEEE-EEEEEESSCCS----SEEECGGGG
T ss_pred CCEEEEEECCCeEEcCEEEECCCHHHHh----hccCCCHHHH-HHHhcCCcceeE-EEEEEeccCCc----ccccccCCC
Confidence 8889988754459999999999999874 3345665543 456777766533 23333333321 123333221
Q ss_pred C--CCceEEEEeeccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCC
Q 004458 464 S--KRGEFFLFYGYHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTH 541 (752)
Q Consensus 464 ~--~~~~~~~~~~~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~ 541 (752)
. ..+..+.++.........++++|+.+.. ..+...+++++++.+++.|.+ +++. .+.+ .....|...|.
T Consensus 303 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~-l~~~---~~~~--~~~~~w~~~p~-- 373 (424)
T 2b9w_A 303 RPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLDDMET-FGHP---VEKI--IEEQTWYYFPH-- 373 (424)
T ss_dssp SGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHHHHHH-TTCC---EEEE--EEEEEEEEEEE--
T ss_pred CCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHHHHHH-cCCc---cccc--ccccceeeeec--
Confidence 1 1111111221112223457788876643 567778899999999999998 4431 1111 22346653221
Q ss_pred CCCCCCcccCCCCchHHhhcccC-CcEEEecccccCcCCcchHHHHHHHHHHHHHHH
Q 004458 542 GSYSHVRVRSSGSDYDILAESVG-SRLFFAGEATTRQYPATMHGAYLSGLREASRIL 597 (752)
Q Consensus 542 Gsys~~~pg~~~~~~~~l~~pv~-~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il 597 (752)
++ .+......+..+...-+ +++||||+++. .|++|+|+.||++||++|+
T Consensus 374 --~~--~~~~~~G~~~~~~~~~~~~~l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 374 --VS--SEDYKAGWYEKVEGMQGRRNTFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp --CC--HHHHHTTHHHHHHHTTTGGGEEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred --cC--HHHHhccHHHHHHHHhCCCCceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 11 11111112333332211 79999999997 4899999999999999885
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=3.4e-27 Score=268.66 Aligned_cols=416 Identities=13% Similarity=0.086 Sum_probs=253.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCCCCCCCceEE-ecCCCCceEEEeccceeEcCCCccHHHHHHHHcC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRSRPGGRVYTQ-KMGKKGEFAAVDLGGSVITGIHANPLGVLARQLS 238 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~~~GGr~~T~-~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LG 238 (752)
..++|+|||||++||+||++|++.| .+|+|+|+++++||+++|. ..+| +.+|.|++++...+ ..+..+++++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g----~~~~~g~~~~~~~~-~~~~~l~~~~~ 82 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENG----FTWDLGGHVIFSHY-QYFDDVMDWAV 82 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTS----CEEESSCCCBCCSB-HHHHHHHHHHC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCC----cEEeeCCcccccCh-HHHHHHHHHHh
Confidence 3579999999999999999999999 7999999999999999996 4443 79999999997744 45677888875
Q ss_pred CCcccccCCCceecCCCccccccchHHH----HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH--HHHhhCCHHH
Q 004458 239 IPLHKVRDNCPLYKPDGAPVNKEIDSKV----EFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQ--LYAVARSTEE 312 (752)
Q Consensus 239 l~~~~~~~~~~~~~~~G~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~--~~~~~~s~~~ 312 (752)
-+... ......+..+|+.++.+....+ .......+...... +......++.|+++|+..... ++.....+..
T Consensus 83 ~~~~~-~~~~~~~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~-~~~~~~~~~~s~~e~~~~~~g~~~~~~~~~p~~ 160 (484)
T 4dsg_A 83 QGWNV-LQRESWVWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRS-HARTYTEPPNNFEESFTRQFGEGIADIFMRPYN 160 (484)
T ss_dssp SCEEE-EECCCEEEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHH-HHCCCSSCCSSHHHHHHHHHHHHHCCCCCHHHH
T ss_pred hhhhh-ccCceEEEECCEEEEeCccchhhhCCHHHHHHHHHHHHHH-HhccCCCCCCCHHHHHHHHhHHHHHHHHHHHHH
Confidence 22222 2222333456766554421111 00111111111111 111233567899998875311 1111112211
Q ss_pred HHHHHHHHHhhhh------ccCCCchhhhhhccccCC--CccCCCCce-ecCCCHHHHHHHHHcCC---cEEcC--ceEE
Q 004458 313 RELLDWHLANLEY------ANAGCLSDLSATYWDQDD--PYEMGGDHC-FLAGGNWRLIKALCEGV---PIFYE--KTVN 378 (752)
Q Consensus 313 ~~~l~~~~~~le~------~~~~~l~~ls~~~~~~~~--~~~~~g~~~-~~~gG~~~L~~aLa~gl---~I~ln--~~V~ 378 (752)
...+......+.. .....+..+....+.... .+...+.+. .+.||+++|+++|++.+ +|+++ ++|+
T Consensus 161 ~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~ 240 (484)
T 4dsg_A 161 FKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAI 240 (484)
T ss_dssp HHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEE
T ss_pred hhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeE
Confidence 1111100000000 000001111111111110 011112223 35699999999999976 79999 5699
Q ss_pred EEEecCCcEEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCccee
Q 004458 379 TIKYGNEGVEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGC 458 (752)
Q Consensus 379 ~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~ 458 (752)
+|..++++|++ .+|+++.||+||+|+|+..+.++.....|++|+...++++.+.|.++.+|.+.|+.+.-+.-.+.++.
T Consensus 241 ~I~~~~~~v~~-~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i 319 (484)
T 4dsg_A 241 AIDADAKTITF-SNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWL 319 (484)
T ss_dssp EEETTTTEEEE-TTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEE
T ss_pred EEEecCCEEEE-CCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEE
Confidence 99998887754 57788999999999999999864433345688888999999999999999999998732211345666
Q ss_pred eccCCCCCceEEEEee----ccccCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCe-eEEEEe
Q 004458 459 LNEQSSKRGEFFLFYG----YHTVSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPL-QTICTR 533 (752)
Q Consensus 459 l~~~~~~~~~~~~~~~----~~~~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~-~~~v~r 533 (752)
+.++.........+++ ...|++..+++..+... ....++++++++.++++|.++.+-. ..+++ ...+++
T Consensus 320 ~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~---~~~~~~~~~v~r 393 (484)
T 4dsg_A 320 YFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLLL---PEDLLVSKWHYR 393 (484)
T ss_dssp ECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSCC---TTCCEEEEEEEE
T ss_pred EEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCCC---ccceEEEEEEEE
Confidence 6655432222222222 23455666666655433 3456899999999999999985321 11343 345778
Q ss_pred cCCCCCCCCCCCCCcccCCCCchHHhhcccC-CcEEEecccccCcCC-cchHHHHHHHHHHHHHHH
Q 004458 534 WGSDPFTHGSYSHVRVRSSGSDYDILAESVG-SRLFFAGEATTRQYP-ATMHGAYLSGLREASRIL 597 (752)
Q Consensus 534 W~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~-~~L~fAGe~ts~~~~-g~veGAl~SG~rAA~~Il 597 (752)
|.. +|....+++. .....+.+... .+|+|+|.+....|. ..|+.|+.||++||++|+
T Consensus 394 ~~~------~yP~y~~~~~-~~~~~~~~~l~~~~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 394 IEK------GYPTPFIGRN-NLLEKAQPELMSRCIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEE------EEECCBTTHH-HHHHHHHHHHHHTTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred eCc------cccCCCccHH-HHHHHHHHHHHhCCcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 864 3333344432 11112221110 289999998776443 569999999999999997
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.94 E-value=4.8e-25 Score=237.65 Aligned_cols=322 Identities=16% Similarity=0.229 Sum_probs=219.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
.+||+|||||++||++|+.|++.|++|+|+|+++.+||++.+....+ ..+|.|..++..... .+..+++++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 75 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA----GALDMGAQYFTARDR-RFATAVKQWQAQ- 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT----EEEECSCCCBCCCSH-HHHHHHHHHHHH-
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCC----CeEecCCCeEecCCH-HHHHHHHHHHhC-
Confidence 36999999999999999999999999999999999999999887764 677887776654331 122222111100
Q ss_pred ccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 004458 242 HKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQLYAVARSTEERELLDWHLA 321 (752)
Q Consensus 242 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~~~ 321 (752)
..
T Consensus 76 -------------------------------------------~~----------------------------------- 77 (336)
T 1yvv_A 76 -------------------------------------------GH----------------------------------- 77 (336)
T ss_dssp -------------------------------------------TS-----------------------------------
T ss_pred -------------------------------------------CC-----------------------------------
Confidence 00
Q ss_pred hhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcCCcEEcCceEEEEEecCCcEEEEE-CCEEE-Eec
Q 004458 322 NLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEGVPIFYEKTVNTIKYGNEGVEVIA-GDQMF-QAD 399 (752)
Q Consensus 322 ~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~-~AD 399 (752)
.. .............+ .........+....|+..+.++|+++++|+++++|++|+.++++|+|++ +|+.+ .||
T Consensus 78 -~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~ 152 (336)
T 1yvv_A 78 -VA-EWTPLLYNFHAGRL---SPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFS 152 (336)
T ss_dssp -EE-EECCCEEEESSSBC---CCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEES
T ss_pred -ee-eccccceeccCccc---ccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccC
Confidence 00 00000000000000 0001112234567799999999999999999999999999999999977 66655 499
Q ss_pred EEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeeccccC
Q 004458 400 MVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYHTVS 479 (752)
Q Consensus 400 ~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~~~ 479 (752)
+||+|+|+..+.+. +.+.| .....+..+.|.+..++++.|++++|... ..++ ..+ ....+++.+...|.
T Consensus 153 ~vV~a~g~~~~~~~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~---~~~~~l~~~~~~p~ 221 (336)
T 1yvv_A 153 HVIIATPAPQASTL-LAAAP----KLASVVAGVKMDPTWAVALAFETPLQTPM-QGCF--VQD---SPLDWLARNRSKPE 221 (336)
T ss_dssp EEEECSCHHHHGGG-GTTCH----HHHHHHTTCCEEEEEEEEEEESSCCSCCC-CEEE--ECS---SSEEEEEEGGGSTT
T ss_pred EEEEcCCHHHHHHh-hccCH----HHHHHHhhcCccceeEEEEEecCCCCCCC-CeEE--eCC---CceeEEEecCcCCC
Confidence 99999999988752 33333 34678899999999999999999988542 2222 222 11223333332222
Q ss_pred --CC-cEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCCch
Q 004458 480 --GG-PVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGSDY 556 (752)
Q Consensus 480 --g~-~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~ 556 (752)
+. ..++.+..++.+..+..++++++.+.+++.|..++|. ..+.|....+.+|.. +...|.. +.
T Consensus 222 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~---~~~~p~~~~~~rw~~---a~~~~~~---~~----- 287 (336)
T 1yvv_A 222 RDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC---TMPAPVFSLAHRWLY---ARPAGAH---EW----- 287 (336)
T ss_dssp CCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS---CCCCCSEEEEEEEEE---EEESSCC---CC-----
T ss_pred CCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEccccCc---cCCCCCC---CC-----
Confidence 11 3566666667777888899999999999999999975 355677788889973 2222211 11
Q ss_pred HHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhh
Q 004458 557 DILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATR 601 (752)
Q Consensus 557 ~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~ 601 (752)
..+..+. +||+||||++. .+++++|+.||.++|+.|++.+.
T Consensus 288 ~~~~~~~-~rl~laGDa~~---g~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 288 GALSDAD-LGIYVCGDWCL---SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp SCEEETT-TTEEECCGGGT---TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CeeecCC-CCEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHhh
Confidence 0112333 89999999996 36999999999999999999874
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.88 E-value=2.5e-23 Score=231.05 Aligned_cols=252 Identities=17% Similarity=0.150 Sum_probs=151.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhC-CCeEEEEcCCCCCCCCceEEecCCCCceEEE-eccceeEcCCCccHHHHHHHHcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF-GFKVVVLEGRSRPGGRVYTQKMGKKGEFAAV-DLGGSVITGIHANPLGVLARQLSI 239 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~-d~Ga~~i~~~~~n~l~~L~~~LGl 239 (752)
.+||+|||||++||+||++|++. |++|+|+|+++++||+++|...+.. ++.+ +.|+++++..+ ..+..+++++|+
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~--g~~~~~~G~~~~~~~~-~~~~~~~~~~g~ 83 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQT--GIEVHKYGAHLFHTSN-KRVWDYVRQFTD 83 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTT--CCEEETTSCCCEEESC-HHHHHHHTTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCC--CEEEEeCCCcEEcCCc-HHHHHHHHHhhh
Confidence 57999999999999999999999 9999999999999999999987311 2666 59999998654 457788999987
Q ss_pred CcccccCCCceecCCCccccccchH-HHHHHHHHH--HHHHH-HHHHHhcC--CCCCCCHHHHHHHHHHHHHhhCCHHHH
Q 004458 240 PLHKVRDNCPLYKPDGAPVNKEIDS-KVEFIFNKL--LDKVM-ELRKIKGG--FANDVSLGSVLETLRQLYAVARSTEER 313 (752)
Q Consensus 240 ~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~l--l~~~~-~~~~~~~~--~~~~~sl~e~l~~l~~~~~~~~s~~~~ 313 (752)
.... .....+..+|+.++.+... .+...+... .+... .+.+.... ..++.|+++++... + ......
T Consensus 84 -~~~~-~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~~--~----g~~~~~ 155 (399)
T 1v0j_A 84 -FTDY-RHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISL--I----GRPLYE 155 (399)
T ss_dssp -BCCC-CCCEEEEETTEEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHHH--H----CHHHHH
T ss_pred -hhcc-ccceEEEECCEEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHHH--H----hHHHHH
Confidence 2222 2233445677766554432 122222110 11111 11122221 23567788877641 1 112222
Q ss_pred HHHHHHHHhhhhccCCCchhhhhhccc---cCCCccCCCCce-ecCCCHHHHHHHHHc--CCcEEcCceEEEEEecCCcE
Q 004458 314 ELLDWHLANLEYANAGCLSDLSATYWD---QDDPYEMGGDHC-FLAGGNWRLIKALCE--GVPIFYEKTVNTIKYGNEGV 387 (752)
Q Consensus 314 ~~l~~~~~~le~~~~~~l~~ls~~~~~---~~~~~~~~g~~~-~~~gG~~~L~~aLa~--gl~I~ln~~V~~I~~~~~gv 387 (752)
.++.+............++........ ..+...+...+. +++||+++++++|++ |.+|++|++|++|... |
T Consensus 156 ~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~---v 232 (399)
T 1v0j_A 156 AFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQ---L 232 (399)
T ss_dssp HHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTTEEEECSCCHHHHHHH---H
T ss_pred HHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCCeEEEECCchhhhhhh---h
Confidence 333333222221111222211110000 000000111232 789999999999998 4579999999999643 2
Q ss_pred EEEECCEEE-EecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCc
Q 004458 388 EVIAGDQMF-QADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYV 447 (752)
Q Consensus 388 ~V~~~g~~~-~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~ 447 (752)
+ ++ .||+||+|+|++.+.+. .+..+.|.++..+.+.++.+
T Consensus 233 ----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 233 ----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp ----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSS
T ss_pred ----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcceEEEEEEEEccc
Confidence 1 35 69999999999988642 23578888888888888765
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.84 E-value=2.9e-20 Score=204.08 Aligned_cols=247 Identities=17% Similarity=0.135 Sum_probs=155.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEe-ccceeEcCCCccHHHHHHHHcCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVD-LGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d-~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
+||+|||||++||+||++|++.|++|+|+|+++++||++++....+ +.+| .|+++++..+. .+..+++++|...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g----~~~~~~G~~~~~~~~~-~~~~~~~~l~~~~ 76 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG----IQIHKYGAHIFHTNDK-YIWDYVNDLVEFN 76 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT----EEEETTSCCCEEESCH-HHHHHHHTTSCBC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC----ceeeccCCceecCCCH-HHHHHHHHhhhhh
Confidence 5899999999999999999999999999999999999999988764 6785 99999987653 4667888888532
Q ss_pred ccccCCCceecCCCccccccchH-HHHHHHHH-HHHHHHHH-HHHhcC--CCCCCCHHHHHHHHHHHHHhhCCHHHHHHH
Q 004458 242 HKVRDNCPLYKPDGAPVNKEIDS-KVEFIFNK-LLDKVMEL-RKIKGG--FANDVSLGSVLETLRQLYAVARSTEERELL 316 (752)
Q Consensus 242 ~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-ll~~~~~~-~~~~~~--~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l 316 (752)
.... ......+|+.++.+.+. .+...+.. .......+ .+.... ..++.|+++++..... ......++
T Consensus 77 -~~~~-~~~~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~~g------~~~~~~~~ 148 (367)
T 1i8t_A 77 -RFTN-SPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVG------EDLYQALI 148 (367)
T ss_dssp -CCCC-CCEEEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHHHH------HHHHHHHT
T ss_pred -hccc-cceEEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHh------HHHHHHHH
Confidence 2222 23344567665554432 12121110 01111111 111111 2457899998765211 11112233
Q ss_pred HHHHHhhhhccCCCchhhhhhccc-----c-CCCccCCCCce-ecCCCHHHHHHHHHcCCcEEcCceEEEEEecCCcEEE
Q 004458 317 DWHLANLEYANAGCLSDLSATYWD-----Q-DDPYEMGGDHC-FLAGGNWRLIKALCEGVPIFYEKTVNTIKYGNEGVEV 389 (752)
Q Consensus 317 ~~~~~~le~~~~~~l~~ls~~~~~-----~-~~~~~~~g~~~-~~~gG~~~L~~aLa~gl~I~ln~~V~~I~~~~~gv~V 389 (752)
.+....... .....+++..+. . .+...+.+.+. +++||+++++++|+++++|++|++|++|.. .|
T Consensus 149 ~p~~~~~~~---~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g~~i~l~~~V~~i~~---~v-- 220 (367)
T 1i8t_A 149 KGYTEKQWG---RSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKD---SL-- 220 (367)
T ss_dssp HHHHHHHHS---SCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTTSEEECSCCGGGSHH---HH--
T ss_pred HHHHhhhhC---CChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcCCEEEeCCceeeech---hh--
Confidence 332222221 222222222110 0 00001133443 889999999999999999999999998863 12
Q ss_pred EECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCccc
Q 004458 390 IAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFW 449 (752)
Q Consensus 390 ~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW 449 (752)
++.||+||+|+|+..+... .+.++.|.++..+.+.+++..+
T Consensus 221 -----~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 221 -----ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp -----HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred -----hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccC
Confidence 2469999999999987531 2357888888888898987643
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.84 E-value=2.7e-20 Score=205.55 Aligned_cols=245 Identities=14% Similarity=0.148 Sum_probs=150.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEE-eccceeEcCCCccHHHHHHHHcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAV-DLGGSVITGIHANPLGVLARQLSIP 240 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~-d~Ga~~i~~~~~n~l~~L~~~LGl~ 240 (752)
.++|+|||||++||++|+.|++.|++|+|+|+++++||+++|...... ++.+ |.|+++++..+ ..+..+++++|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~--g~~~~~~G~~~~~~~~-~~~~~~~~~l~~~ 79 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSET--NVMVHVYGPHIFHTDN-ETVWNYVNKHAEM 79 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTT--CCEEETTSCCCEEESC-HHHHHHHHTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCC--CceEeeCCceEECCCC-HHHHHHHHHHhhh
Confidence 579999999999999999999999999999999999999999987321 2554 99999998754 4577889999862
Q ss_pred cccccCCCceecCCCccccccchH-HHHHHHHHH--HHHHH-HHHHHhcC-CCCCCCHHHHHHHHHHHHHhhCCHHHHHH
Q 004458 241 LHKVRDNCPLYKPDGAPVNKEIDS-KVEFIFNKL--LDKVM-ELRKIKGG-FANDVSLGSVLETLRQLYAVARSTEEREL 315 (752)
Q Consensus 241 ~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~l--l~~~~-~~~~~~~~-~~~~~sl~e~l~~l~~~~~~~~s~~~~~~ 315 (752)
..... ......+|+.++.+... .+...+... ..... .+.+.... ..++.|+++++.... .......+
T Consensus 80 -~~~~~-~~~~~~~g~~~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~sl~e~~~~~~------g~~~~~~~ 151 (384)
T 2bi7_A 80 -MPYVN-RVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTIADPQTFEEEALRFI------GKELYEAF 151 (384)
T ss_dssp -EECCC-CEEEEETTEEEEESCCHHHHHHHTTCCCCHHHHHHHHHHHSCCSCSSCCBHHHHHHHHH------CHHHHHHH
T ss_pred -ccccc-ceEEEECCEEEECCCChhHHHHHhcccCCHHHHHHHHHHhhhccCCCCcCHHHHHHHhh------cHHHHHHH
Confidence 22222 23344566655444332 111111110 01111 11122111 245789999876521 11122233
Q ss_pred HHHHHHhhhhccCCCchhhhhhcc---ccCCCccCCCCce-ecCCCHHHHHHHHHc--CCcEEcCceEE-EEEecCCcEE
Q 004458 316 LDWHLANLEYANAGCLSDLSATYW---DQDDPYEMGGDHC-FLAGGNWRLIKALCE--GVPIFYEKTVN-TIKYGNEGVE 388 (752)
Q Consensus 316 l~~~~~~le~~~~~~l~~ls~~~~---~~~~~~~~~g~~~-~~~gG~~~L~~aLa~--gl~I~ln~~V~-~I~~~~~gv~ 388 (752)
+.+............++......+ ...+...+.+.+. +++||+++++++|++ +++|++|++|+ +|..
T Consensus 152 ~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~------ 225 (384)
T 2bi7_A 152 FKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVEERT------ 225 (384)
T ss_dssp THHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG------
T ss_pred HHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc------
Confidence 333222222222122221111000 0001111234443 899999999999998 56899999999 8853
Q ss_pred EEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEec
Q 004458 389 VIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFP 445 (752)
Q Consensus 389 V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd 445 (752)
.||+||+|+|+..+... .+..+.|.++..+.+.+|
T Consensus 226 --------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 --------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred --------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 29999999999988642 134688888888888886
No 29
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.79 E-value=1.5e-17 Score=187.64 Aligned_cols=373 Identities=10% Similarity=0.091 Sum_probs=199.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCC----Cc--------eEEEeccceeEcCC---
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKK----GE--------FAAVDLGGSVITGI--- 225 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~----g~--------~~~~d~Ga~~i~~~--- 225 (752)
..+||||||||++||+||+.|++.|++|+|+|+++++||+++|++.++. +. ...++.|.+++.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 4579999999999999999999999999999999999999999765420 00 00133444333221
Q ss_pred ---CccHHHHHHHHcCCCcc-cc-cCCCceecCCCccccccch-H-HH---------HHHHHHHHHHHHHHHHH----hc
Q 004458 226 ---HANPLGVLARQLSIPLH-KV-RDNCPLYKPDGAPVNKEID-S-KV---------EFIFNKLLDKVMELRKI----KG 285 (752)
Q Consensus 226 ---~~n~l~~L~~~LGl~~~-~~-~~~~~~~~~~G~~~~~~~~-~-~~---------~~~~~~ll~~~~~~~~~----~~ 285 (752)
...++..+++++|+... .+ .....+.+.+|+.+..+.+ . .+ ...+.+++..+..+... ..
T Consensus 90 ~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 169 (453)
T 2bcg_G 90 FLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQ 169 (453)
T ss_dssp BEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGGST
T ss_pred eeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchhhh
Confidence 12467889999998532 11 1112223356665544333 1 00 01222222222211100 00
Q ss_pred C-CCCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhh---hhccCCCchhhh-hhcccc-CCCccCCCCceecCCCHH
Q 004458 286 G-FANDVSLGSVLETLRQLYAVARSTEERELLDWHLANL---EYANAGCLSDLS-ATYWDQ-DDPYEMGGDHCFLAGGNW 359 (752)
Q Consensus 286 ~-~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~~~~l---e~~~~~~l~~ls-~~~~~~-~~~~~~~g~~~~~~gG~~ 359 (752)
. .....|+.++++. ...++..+.++....... .+........+. ...+.. ...+ ..+.+.++.||++
T Consensus 170 ~~~~~~~s~~~~l~~------~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~ 242 (453)
T 2bcg_G 170 GLDLDKNTMDEVYYK------FGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLG 242 (453)
T ss_dssp TCCTTTSBHHHHHHH------TTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTT
T ss_pred ccccccCCHHHHHHH------hCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHH
Confidence 0 1245688877654 234666666554332210 011111001110 000000 0000 1345668999999
Q ss_pred HHHHHHHc-----CCcEEcCceEEEEEec--CCcE-EEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHh
Q 004458 360 RLIKALCE-----GVPIFYEKTVNTIKYG--NEGV-EVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDR 431 (752)
Q Consensus 360 ~L~~aLa~-----gl~I~ln~~V~~I~~~--~~gv-~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~ 431 (752)
.|+++|++ |++|++|++|++|... ++++ .|.++|+++.||+||+|+++..-+ + ++
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~---------l--------~~ 305 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEK---------C--------KS 305 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGG---------E--------EE
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchh---------h--------cc
Confidence 99998875 7899999999999988 6665 466789999999999999765210 1 11
Q ss_pred cCCccEEEEEEEecCccc-ccCCCcceeeccC--CCCCceEEEEeec----cccCCCcEEEEEeccchhhhhccCCHHHH
Q 004458 432 LGFGLLNKVAMVFPYVFW-GEELDTFGCLNEQ--SSKRGEFFLFYGY----HTVSGGPVLNALVAGEAAKTFESMDPSFL 504 (752)
Q Consensus 432 l~~g~~~kV~L~fd~~fW-~~~~~~fg~l~~~--~~~~~~~~~~~~~----~~~~g~~vL~~~~~g~~a~~~~~lsdeel 504 (752)
++- .....++..++++- ......+..+.+. ......+++.... .+|+|..++.+++..+. .+.++-
T Consensus 306 ~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~------~~~~~~ 378 (453)
T 2bcg_G 306 TGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIET------DKPHIE 378 (453)
T ss_dssp EEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCS------SCHHHH
T ss_pred cCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCC------CCHHHH
Confidence 110 23333333676652 1111122212111 1112234433221 25777777777765442 233333
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCeeEE-EEecCCCCCCCCCCCCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchH
Q 004458 505 LHRVLNVLRGIYNPKGIDVPDPLQTI-CTRWGSDPFTHGSYSHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMH 583 (752)
Q Consensus 505 ~~~vl~~L~~if~~~~~~vp~p~~~~-v~rW~~dp~~~Gsys~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~ve 583 (752)
++.+++. +.|. ..... +..+. .|- ......+||+||++... ..+|
T Consensus 379 l~~~~~~---l~~~-------~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~~~~~---~~~~ 424 (453)
T 2bcg_G 379 LEPAFKL---LGPI-------EEKFMGIAELF------------EPR---------EDGSKDNIYLSRSYDAS---SHFE 424 (453)
T ss_dssp THHHHGG---GCSC-------SEEEEEEEEEE------------EES---------SCSTTTSEEECCCCCSC---SBSH
T ss_pred HHHHHHH---hhhH-------HHhhccchhee------------eec---------CCCCCCCEEECCCCCcc---ccHH
Confidence 3333333 3221 11111 11111 010 00112789999998874 4469
Q ss_pred HHHHHHHHHHHHHHH
Q 004458 584 GAYLSGLREASRILR 598 (752)
Q Consensus 584 GAl~SG~rAA~~Il~ 598 (752)
+|+.++++++.+|..
T Consensus 425 ~~~~~~~~~~~~~~g 439 (453)
T 2bcg_G 425 SMTDDVKDIYFRVTG 439 (453)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHC
Confidence 999999999999983
No 30
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.76 E-value=2e-17 Score=182.53 Aligned_cols=247 Identities=15% Similarity=0.130 Sum_probs=157.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEe-cCCCCceEE-EeccceeEcCCCccHHHHHHHHc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQK-MGKKGEFAA-VDLGGSVITGIHANPLGVLARQL 237 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~-~~g~g~~~~-~d~Ga~~i~~~~~n~l~~L~~~L 237 (752)
...++|+|||||++||+||++|++.|++|+|+|+++++||++++.. ..| +. .|.|++++.... ..+..+++++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----~~~~~~G~~~~~~~~-~~~~~~~~~~ 101 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----VLIHPYGPHIFHTNS-KDVFEYLSRF 101 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS----CEECTTSCCCCEESC-HHHHHHHHTS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC----ceEeecCCcccCCCh-HHHHHHHHHh
Confidence 3468999999999999999999999999999999999999999887 333 44 599999987654 4577889999
Q ss_pred CCCcccccCCCceecCCCccccccchHH-HHHHHHHH--HHHHHH-HHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHHH
Q 004458 238 SIPLHKVRDNCPLYKPDGAPVNKEIDSK-VEFIFNKL--LDKVME-LRKIKGGFANDVSLGSVLETLRQLYAVARSTEER 313 (752)
Q Consensus 238 Gl~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~l--l~~~~~-~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~~ 313 (752)
|... . .......+.+|+.++.+.... +..++... ...... +.+......++.|+++|+..... .....
T Consensus 102 ~~~~-~-~~~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~~~G------~~~~e 173 (397)
T 3hdq_A 102 TEWR-P-YQHRVLASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVSKVG------RDLYN 173 (397)
T ss_dssp CCEE-E-CCCBEEEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHHHHH------HHHHH
T ss_pred hhcc-c-ccccceEEECCEEEEcCCChHHHHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHHhcC------HHHHH
Confidence 8522 1 223344456888777665432 11121100 001111 11112233567899998865211 11222
Q ss_pred HHHHHHHHhhhhccCCCchhhhhhccccC-------CCccCCCCc-eecCCCHHHHHHHHHc--CCcEEcCceEEEEEec
Q 004458 314 ELLDWHLANLEYANAGCLSDLSATYWDQD-------DPYEMGGDH-CFLAGGNWRLIKALCE--GVPIFYEKTVNTIKYG 383 (752)
Q Consensus 314 ~~l~~~~~~le~~~~~~l~~ls~~~~~~~-------~~~~~~g~~-~~~~gG~~~L~~aLa~--gl~I~ln~~V~~I~~~ 383 (752)
.++.+...... +...+.+++. |... +...+.+.+ ..++||+++|+++|++ |++|++|++|+++
T Consensus 174 ~~~~py~~k~~---~~~~~~Lsa~-~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~--- 246 (397)
T 3hdq_A 174 KFFRGYTRKQW---GLDPSELDAS-VTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI--- 246 (397)
T ss_dssp HHTHHHHHHHH---SSCGGGSBTT-TGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT---
T ss_pred HHHHHHhCchh---CCCHHHHHHH-HHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccCCEEEECCeEEec---
Confidence 33333333222 2222333322 1111 111122233 3589999999999998 7799999999743
Q ss_pred CCcEEEEECCEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCccc
Q 004458 384 NEGVEVIAGDQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFW 449 (752)
Q Consensus 384 ~~gv~V~~~g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW 449 (752)
+.++.||+||+|+|++.+.. + ...+|.|.++..+.+.++...+
T Consensus 247 ---------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 247 ---------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp ---------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCS
T ss_pred ---------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccC
Confidence 33467999999999998742 1 2357788889999999986543
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.73 E-value=2.1e-15 Score=153.55 Aligned_cols=324 Identities=15% Similarity=0.233 Sum_probs=167.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIPL 241 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~~ 241 (752)
..||+|||||+|||+||+.|++.|++|+||||++++||++.+.+..+ ..+|.|+.++...... +......+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~----~~~d~g~~~~~~~~~~-~~~~~~~~~--- 73 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA----GALDMGAQYFTARDRR-FATAVKQWQ--- 73 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT----EEEECSCCCBCCCSHH-HHHHHHHHH---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC----ceeecCccccccCcHH-HHHHHHHHH---
Confidence 46899999999999999999999999999999999999999988875 6788887765432210 100000000
Q ss_pred ccccCCCceecCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 004458 242 HKVRDNCPLYKPDGAPVNKEIDSKVEFIFNKLLDKVMELRKIKGGFANDVSLGSVLETLRQLYAVARSTEERELLDWHLA 321 (752)
Q Consensus 242 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~~~ 321 (752)
. .
T Consensus 74 ----------------------------------------~--------------------------------------~ 75 (336)
T 3kkj_A 74 ----------------------------------------A--------------------------------------Q 75 (336)
T ss_dssp ----------------------------------------H--------------------------------------H
T ss_pred ----------------------------------------h--------------------------------------c
Confidence 0 0
Q ss_pred hhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcCCcEEcCceEEEEEecCCcEEEEE--CCEEEEec
Q 004458 322 NLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEGVPIFYEKTVNTIKYGNEGVEVIA--GDQMFQAD 399 (752)
Q Consensus 322 ~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~gl~I~ln~~V~~I~~~~~gv~V~~--~g~~~~AD 399 (752)
.............. .. ................+.............+........+....+...+.. +.......
T Consensus 76 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (336)
T 3kkj_A 76 GHVAEWTPLLYNFH-AG--RLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFS 152 (336)
T ss_dssp TSEEEECCCEEEES-SS--BCCCCCTTSCEEEESSSTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEES
T ss_pred cccccccccccccc-cc--cccccccccceeecccccccchhcccccceeecceeecccccccccccccccccccccccc
Confidence 00000000000000 00 000000001112233444455555555667777777777777766666554 33344455
Q ss_pred EEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEEeeccc--
Q 004458 400 MVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLFYGYHT-- 477 (752)
Q Consensus 400 ~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~~~~~~-- 477 (752)
.++.+........ ... .......................+....+.... ....... ...........
T Consensus 153 ~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~ 221 (336)
T 3kkj_A 153 HVIIATPAPQAST-LLA----AAPKLASVVAGVKMDPTWAVALAFETPLQTPMQ---GCFVQDS---PLDWLARNRSKPE 221 (336)
T ss_dssp CEEECSCHHHHGG-GGT----TCHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC---EEEECSS---SEEEEEEGGGSTT
T ss_pred cceeccccchhhh-hhc----ccccccccccccccccchhhhhccccccccccc---ccccccc---ccccccccccccc
Confidence 5555555444322 111 111112222222333333333444333222111 0000000 01111111111
Q ss_pred -cCCCcEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeEEEEecCCCCCCCCCCCCCcccCCCCch
Q 004458 478 -VSGGPVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQTICTRWGSDPFTHGSYSHVRVRSSGSDY 556 (752)
Q Consensus 478 -~~g~~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~~v~rW~~dp~~~Gsys~~~pg~~~~~~ 556 (752)
.........................+..+.....+...++. ..+.+.....++|.. +.... .. ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~w~~---a~~~~---~~-----~~ 287 (336)
T 3kkj_A 222 RDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC---TMPAPVFSLAHRWLY---ARPAG---AH-----EW 287 (336)
T ss_dssp CCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS---CCCCCSEEEEEEEEE---EEESS---CC-----CC
T ss_pred cccccccceeccccccccccccccchhhhhhhhhhhhhhccC---CcCcchheeccceee---ccccc---cc-----Cc
Confidence 11111222233333333445556677777777777776654 356777778888852 11100 00 00
Q ss_pred HHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhcc
Q 004458 557 DILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQ 603 (752)
Q Consensus 557 ~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~ 603 (752)
+....+. +|||+|||++. ++++++|+.||..||+.|++.|+..
T Consensus 288 ~~~~~~~-~~v~l~GDa~~---g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 288 GALSDAD-LGIYVCGDWCL---SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp SSEEETT-TTEEECCGGGT---TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred cceeeCC-CCEEEEecccC---CcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 1112233 89999999986 3679999999999999999999754
No 32
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.71 E-value=1.5e-16 Score=174.12 Aligned_cols=234 Identities=20% Similarity=0.213 Sum_probs=135.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC-CCCCCCceEEecCCC------CceEEEeccceeEcCCCccHHHH
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR-SRPGGRVYTQKMGKK------GEFAAVDLGGSVITGIHANPLGV 232 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~-~~~GGr~~T~~~~g~------g~~~~~d~Ga~~i~~~~~n~l~~ 232 (752)
...++|+|||||++||+||+.|++.|++|+|||++ +++|||++|++...+ ..+..+|.|++++...+ ..+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~-~~~~~ 120 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFH-PLTLA 120 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTC-HHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchH-HHHHH
Confidence 34679999999999999999999999999999999 999999999984310 12378999999998765 35778
Q ss_pred HHHHcCCCcccccC-------------------------------------------CCceecCCCcccccc--------
Q 004458 233 LARQLSIPLHKVRD-------------------------------------------NCPLYKPDGAPVNKE-------- 261 (752)
Q Consensus 233 L~~~LGl~~~~~~~-------------------------------------------~~~~~~~~G~~~~~~-------- 261 (752)
+++++|++...+.. ....+..+|+.+...
T Consensus 121 ~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~~~~~~~~~ 200 (376)
T 2e1m_A 121 LIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRAQYATDPSS 200 (376)
T ss_dssp HHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHHHHHHCTHH
T ss_pred HHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecccccccCHHH
Confidence 99999998655322 122233344322100
Q ss_pred --------c---hHHHHHHHHHHHHHHHH----------------------HHHHhcCCCCCCCHHHHHHHHHHHHHhhC
Q 004458 262 --------I---DSKVEFIFNKLLDKVME----------------------LRKIKGGFANDVSLGSVLETLRQLYAVAR 308 (752)
Q Consensus 262 --------~---~~~~~~~~~~ll~~~~~----------------------~~~~~~~~~~~~sl~e~l~~l~~~~~~~~ 308 (752)
. ...+...+...++.... +...... .+..|+.+|+.. ....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lD~~S~~~~L~~-----~~g~ 274 (376)
T 2e1m_A 201 INEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRD-FDGYSMGRFLRE-----YAEF 274 (376)
T ss_dssp HHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHH-HTTCBHHHHHHH-----TSCC
T ss_pred hccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHHHH-HhCCCHHHHHhh-----ccCC
Confidence 0 00111222222222111 1111111 246677777652 1234
Q ss_pred CHHHHHHHHHHHHhhhhccCCCchhhhhhccccCCCccCCCCceecCCCHHHHHHHHHcCC--cEEcCceEEEEEecCCc
Q 004458 309 STEERELLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLIKALCEGV--PIFYEKTVNTIKYGNEG 386 (752)
Q Consensus 309 s~~~~~~l~~~~~~le~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~gl--~I~ln~~V~~I~~~~~g 386 (752)
++...+.+.... + +.....++.+.... .. ..+..+..++.+.||+++|+++|++.+ +|++|++|++|.+.+++
T Consensus 275 s~~~~~~~~~~~-~--~~~~~~~s~l~~l~-~~-~~~~~~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~g 349 (376)
T 2e1m_A 275 SDEAVEAIGTIE-N--MTSRLHLAFFHSFL-GR-SDIDPRATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPG 349 (376)
T ss_dssp CHHHHHHHHHHT-T--CTTTTTSBHHHHHH-HC-SCSCTTCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC
T ss_pred CHHHHHHHHhhc-C--ccccchhhHHHHHH-Hh-hhhccCCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCc
Confidence 555544442221 1 11111112111111 11 112234668899999999999999855 79999999999999999
Q ss_pred EEEEE-CCEEEEecEEEEcC
Q 004458 387 VEVIA-GDQMFQADMVLCTV 405 (752)
Q Consensus 387 v~V~~-~g~~~~AD~VV~Av 405 (752)
+.|.+ +......-+|.+.+
T Consensus 350 v~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 350 RDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp -------------CCEEEEE
T ss_pred eEEEeCCCcCCCCCeeEEEe
Confidence 87754 33334445555544
No 33
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.70 E-value=8.6e-18 Score=165.67 Aligned_cols=129 Identities=21% Similarity=0.263 Sum_probs=108.0
Q ss_pred EEEeecccc--CCC-cEEEEEeccchhhhhccCCHHHHHHHHHHHHHHhcCCCCCCCCCCeeE--EEEecCCCCCCCCCC
Q 004458 470 FLFYGYHTV--SGG-PVLNALVAGEAAKTFESMDPSFLLHRVLNVLRGIYNPKGIDVPDPLQT--ICTRWGSDPFTHGSY 544 (752)
Q Consensus 470 ~~~~~~~~~--~g~-~vL~~~~~g~~a~~~~~lsdeel~~~vl~~L~~if~~~~~~vp~p~~~--~v~rW~~dp~~~Gsy 544 (752)
.+|++.... ++. .+|++|+.|+.+..+..++++++++.++++|+++|++. +..+..+ ++++|.+|||+.|+|
T Consensus 22 ~i~d~S~~~~~~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~---~~~~~~~~~~~~~W~~dp~~~Ga~ 98 (181)
T 2e1m_C 22 FMYYPSHPVPGTQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR---IEVFYTGAGQTQSWLRDPYACGEA 98 (181)
T ss_dssp EEECCSSCCTTCSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG---GGGTEEEEEEEEESSSCTTTSSSE
T ss_pred EEEECCCCcCCCCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC---cHhhccCcceecccCCCCCCCCcc
Confidence 455544332 333 68999999999999999999999999999999999764 3233367 889999999999999
Q ss_pred CCCcccCCCCchHHhhcccCCcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhcc
Q 004458 545 SHVRVRSSGSDYDILAESVGSRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRVQ 603 (752)
Q Consensus 545 s~~~pg~~~~~~~~l~~pv~~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~~ 603 (752)
+++.||+....++.+.+|. ++||||||+|+. ++||||||+.||.|||.+|+..++..
T Consensus 99 s~~~pg~~~~~~~~l~~p~-grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 99 AVYTPHQMTAFHLDVVRPE-GPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp ECCCTTHHHHHHHHHHSCB-TTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred cCcCCCchHHHHHHHhCCC-CcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccC
Confidence 9999998666778899998 899999999996 89999999999999999999987543
No 34
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.68 E-value=3e-16 Score=175.93 Aligned_cols=240 Identities=16% Similarity=0.157 Sum_probs=150.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEe-cC----------------CCCceEEEeccceeEc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQK-MG----------------KKGEFAAVDLGGSVIT 223 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~-~~----------------g~g~~~~~d~Ga~~i~ 223 (752)
..++|+|||||++||+||+.|++.|++|+|+|+++++||+++|++ .. +.+.++.+|+|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 357999999999999999999999999999999999999999998 10 1123478999999887
Q ss_pred CCCccHHHHHHHHcCCCccc-c-cCCCceecCCCccccccchH--HH---------HHHHHHHHHHHHHHHHH----hc-
Q 004458 224 GIHANPLGVLARQLSIPLHK-V-RDNCPLYKPDGAPVNKEIDS--KV---------EFIFNKLLDKVMELRKI----KG- 285 (752)
Q Consensus 224 ~~~~n~l~~L~~~LGl~~~~-~-~~~~~~~~~~G~~~~~~~~~--~~---------~~~~~~ll~~~~~~~~~----~~- 285 (752)
... ++..+++++|+.... + .....+.+.+|+.+..+.+. .+ ...+.+++..+..+... ..
T Consensus 85 ~~~--~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 162 (433)
T 1d5t_A 85 ANG--QLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEG 162 (433)
T ss_dssp TTS--HHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTT
T ss_pred ccc--hHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccc
Confidence 643 678899999975321 1 11122334566654443331 11 11222233222221100 00
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhh---hhccCCCchhhh-hhcccc-CCCccCCCCceecCCCHHH
Q 004458 286 GFANDVSLGSVLETLRQLYAVARSTEERELLDWHLANL---EYANAGCLSDLS-ATYWDQ-DDPYEMGGDHCFLAGGNWR 360 (752)
Q Consensus 286 ~~~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~~~~l---e~~~~~~l~~ls-~~~~~~-~~~~~~~g~~~~~~gG~~~ 360 (752)
......|+.++++. ...++..+.++...+... .+........+. ...+.. ...+ ..+.++++.||++.
T Consensus 163 ~~~~~~s~~~~l~~------~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~ 235 (433)
T 1d5t_A 163 VDPQNTSMRDVYRK------FDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGE 235 (433)
T ss_dssp CCTTTSBHHHHHHH------TTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTH
T ss_pred cccccCCHHHHHHH------cCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHH
Confidence 01245788887764 235666666654432110 111111111111 001100 0111 13456789999999
Q ss_pred HHHHHHc-----CCcEEcCceEEEEEecCCcEE-EEECCEEEEecEEEEcCChhh
Q 004458 361 LIKALCE-----GVPIFYEKTVNTIKYGNEGVE-VIAGDQMFQADMVLCTVPLGV 409 (752)
Q Consensus 361 L~~aLa~-----gl~I~ln~~V~~I~~~~~gv~-V~~~g~~~~AD~VV~AvPl~v 409 (752)
++++|++ |++|++|++|++|...++++. |+++|+++.||+||+|+|+..
T Consensus 236 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 236 LPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 9999875 789999999999999888876 567899999999999998763
No 35
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.54 E-value=3.8e-14 Score=159.43 Aligned_cols=238 Identities=15% Similarity=0.162 Sum_probs=141.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCC----------------CCceEEEeccceeEc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGK----------------KGEFAAVDLGGSVIT 223 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g----------------~g~~~~~d~Ga~~i~ 223 (752)
+..+||+|||+|++|+++|+.|++.|++|+|+|+++++||++.++..+. ...++.+|++.+++.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 4568999999999999999999999999999999999999999987431 112478999988886
Q ss_pred CCCccHHHHHHHHcCCCccc-ccCCC--ceec--------CCCccccccchH--HH---------HHHHHHHHHHHHHHH
Q 004458 224 GIHANPLGVLARQLSIPLHK-VRDNC--PLYK--------PDGAPVNKEIDS--KV---------EFIFNKLLDKVMELR 281 (752)
Q Consensus 224 ~~~~n~l~~L~~~LGl~~~~-~~~~~--~~~~--------~~G~~~~~~~~~--~~---------~~~~~~ll~~~~~~~ 281 (752)
... ++..++.++|+.... +.... .++. .+|+..+.+... .+ ...+.+++..+..+.
T Consensus 98 ~~g--~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~ 175 (475)
T 3p1w_A 98 VGG--NLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWD 175 (475)
T ss_dssp TTS--HHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCC
T ss_pred cCc--HHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhh
Confidence 433 577788888885332 11111 1121 144444433221 00 112223333222211
Q ss_pred HH----hcCC-CCCCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHh-h--hhccCCCchhhhh--hccccCCCccCCCCc
Q 004458 282 KI----KGGF-ANDVSLGSVLETLRQLYAVARSTEERELLDWHLAN-L--EYANAGCLSDLSA--TYWDQDDPYEMGGDH 351 (752)
Q Consensus 282 ~~----~~~~-~~~~sl~e~l~~l~~~~~~~~s~~~~~~l~~~~~~-l--e~~~~~~l~~ls~--~~~~~~~~~~~~g~~ 351 (752)
+. ...+ ..+.|+.+|++.+ ..++....++.+.+.. . .+.+......+.. .+......+ .+...
T Consensus 176 ~~~~~~~~~~~l~~~s~~e~l~~~------gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~ 248 (475)
T 3p1w_A 176 ANKRNTWDNLDPYKLTMLEIYKHF------NLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPF 248 (475)
T ss_dssp TTCGGGSTTCCTTTSBHHHHHHHT------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSE
T ss_pred hccchhhhcccccCCCHHHHHHHc------CCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCce
Confidence 00 0111 2467888888752 3455555544221111 0 1111111111110 000000001 12356
Q ss_pred eecCCCHHHHHHHHHc-----CCcEEcCceEEEEEe-cCCcE-EEEE-CCEEEEecEEEEcCC
Q 004458 352 CFLAGGNWRLIKALCE-----GVPIFYEKTVNTIKY-GNEGV-EVIA-GDQMFQADMVLCTVP 406 (752)
Q Consensus 352 ~~~~gG~~~L~~aLa~-----gl~I~ln~~V~~I~~-~~~gv-~V~~-~g~~~~AD~VV~AvP 406 (752)
.+++||++.|+++|++ |++|+++++|++|.. .++++ .|.+ +|+++.||+||++..
T Consensus 249 ~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~ 311 (475)
T 3p1w_A 249 IYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPS 311 (475)
T ss_dssp EEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCC
Confidence 7899999999999875 889999999999998 55554 4666 678899999999984
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.28 E-value=2.6e-10 Score=132.01 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=63.5
Q ss_pred CCceecCCCHHHHHHHHHc-----CCcEEcCceEEEEEecC--CcEE-EEE-CCEEEEecEEEEcCChhhHhhccccCCC
Q 004458 349 GDHCFLAGGNWRLIKALCE-----GVPIFYEKTVNTIKYGN--EGVE-VIA-GDQMFQADMVLCTVPLGVLKEKTIKFEP 419 (752)
Q Consensus 349 g~~~~~~gG~~~L~~aLa~-----gl~I~ln~~V~~I~~~~--~gv~-V~~-~g~~~~AD~VV~AvPl~vLk~~~i~f~P 419 (752)
+.++++.||++.|+++|++ |..|++|++|.+|..++ +++. |+. +|+++.||+||++. ..+ |
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~l--------p 437 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYL--------S 437 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGB--------C
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhc--------C
Confidence 4778999999999999875 88999999999999887 5565 333 69999999999932 222 1
Q ss_pred CCcHHHHHHHHhcCCccEEEEEEEecCccc
Q 004458 420 ELPQRKVAAIDRLGFGLLNKVAMVFPYVFW 449 (752)
Q Consensus 420 ~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW 449 (752)
+. . ..++.++.+.++++.++++.-
T Consensus 438 ~~---~---~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 438 EN---T---CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TT---T---TTTCCCEEEEEEEEEESSCSS
T ss_pred Hh---H---hccccccceEEEEEEecCCCC
Confidence 11 0 123356778899999988753
No 37
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.28 E-value=3.1e-13 Score=124.67 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=70.2
Q ss_pred CEEEEecEEEEcCChhhHhhccccCCCCCcHHHHHHHHhcCCccEEEEEEEecCcccccCCCcceeeccCCCCCceEEEE
Q 004458 393 DQMFQADMVLCTVPLGVLKEKTIKFEPELPQRKVAAIDRLGFGLLNKVAMVFPYVFWGEELDTFGCLNEQSSKRGEFFLF 472 (752)
Q Consensus 393 g~~~~AD~VV~AvPl~vLk~~~i~f~P~Lp~~k~~ai~~l~~g~~~kV~L~fd~~fW~~~~~~fg~l~~~~~~~~~~~~~ 472 (752)
.++++||+||||+|+++|+ .+.|.|+||+.+.++|++++|+..+||++.|+++||+++...+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd--------------- 65 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK--------------- 65 (130)
T ss_dssp CEEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH---------------
T ss_pred ceEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc---------------
Confidence 3579999999999999998 48999999999999999999999999999999999987532110
Q ss_pred eeccccCCCcEEEEEe-ccchhhhhccCCHHHHHHHHHHHHHHhcCC
Q 004458 473 YGYHTVSGGPVLNALV-AGEAAKTFESMDPSFLLHRVLNVLRGIYNP 518 (752)
Q Consensus 473 ~~~~~~~g~~vL~~~~-~g~~a~~~~~lsdeel~~~vl~~L~~if~~ 518 (752)
....+.+..++++|+ +|+.+..|..+++ +..+.+++.|.+++|.
T Consensus 66 -~s~~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 66 -RELDAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp -HHHHHHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred -ccCCCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 000111223778888 5999999999976 6778889999999974
No 38
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=99.27 E-value=4.7e-12 Score=110.61 Aligned_cols=84 Identities=20% Similarity=0.278 Sum_probs=71.8
Q ss_pred HHHcCCCCCCCCHHHHhccccCcc-Cc----cccchhHHHHHHHHHHhhhccccCCCHHHHhhhccchhHHHHHHHHHHH
Q 004458 64 AFSLGFPIDALLEEEIRAGVVGVL-GG----KEQNDYIVVRNHILARWRGNVRVWLTKGQIKETVSSEYEHLMNSAYDFL 138 (752)
Q Consensus 64 a~~~~~p~~~~~~~E~~~~~~~~~-~~----~~~~~yl~irn~i~~~w~~np~~~~t~~~~~~~~~~~~~~l~~~~~~~l 138 (752)
..+..|+.+++++.| +.+||++ .+ +.+..|+.|||.|+.+|+.||..+||..++...+.. ...++..++.||
T Consensus 15 ~~s~wF~~~~Ih~iE--k~~lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~g-Dv~~i~RVh~FL 91 (104)
T 2fq3_A 15 SYSKWFNLEKIHSIE--VQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSG-DAAALFRLHKFL 91 (104)
T ss_dssp --CTTCCTTCCCHHH--HHHCGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSCS-CHHHHHHHHHHH
T ss_pred CcccccCcccCCHHH--HHHChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHccc-cHHHHHHHHHHH
Confidence 356689999999999 6889994 33 568999999999999999999999999999998854 567799999999
Q ss_pred HHccccccccCC
Q 004458 139 LYNGYINFGVAP 150 (752)
Q Consensus 139 ~~~g~in~G~~~ 150 (752)
.+.|+||||+.|
T Consensus 92 e~wGLIN~~v~~ 103 (104)
T 2fq3_A 92 TKWGLINYQVDS 103 (104)
T ss_dssp HHTTSSSSCC--
T ss_pred HHcCeeccCCCC
Confidence 999999999765
No 39
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=8.9e-12 Score=110.70 Aligned_cols=85 Identities=21% Similarity=0.343 Sum_probs=75.1
Q ss_pred HHcCCCCCCCCHHHHhccccCcc-C---ccccchhHHHHHHHHHHhhhccccCCCHHHHhhhcc-chhHHHHHHHHHHHH
Q 004458 65 FSLGFPIDALLEEEIRAGVVGVL-G---GKEQNDYIVVRNHILARWRGNVRVWLTKGQIKETVS-SEYEHLMNSAYDFLL 139 (752)
Q Consensus 65 ~~~~~p~~~~~~~E~~~~~~~~~-~---~~~~~~yl~irn~i~~~w~~np~~~~t~~~~~~~~~-~~~~~l~~~~~~~l~ 139 (752)
.+..|+.+++++.| +.+||++ . .+.+..|+.|||.|+.+|+.||..+||..+|+..+. .....++..+++||.
T Consensus 18 ~~~wf~~~~ih~iE--k~~lPefF~g~~~ktpe~Yl~iRN~iI~~yr~np~~yLT~t~~rr~L~~~gDv~~i~RVh~FLe 95 (111)
T 2dce_A 18 QEIEIDRNIIQEEE--KQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLE 95 (111)
T ss_dssp SCCCCCSSCCCHHH--HTTSGGGGSCCSSCCHHHHHHHHHHHHHHHHHHTTSCCCGGGTTTTTSSSSCHHHHHHHHHHHH
T ss_pred cccccCcccCCHHH--HHhChHHhcCCcccCHHHHHHHHHHHHHHHHhCCcceeeHHHHHHhcccccCHHHHHHHHHHHH
Confidence 45689999999999 6899995 3 357899999999999999999999999999998885 346678999999999
Q ss_pred HccccccccCCC
Q 004458 140 YNGYINFGVAPS 151 (752)
Q Consensus 140 ~~g~in~G~~~~ 151 (752)
++|+||||+.+.
T Consensus 96 ~wGLIN~~~~~~ 107 (111)
T 2dce_A 96 LIGAINFGCEQA 107 (111)
T ss_dssp HHSSSSCSCTTS
T ss_pred HcCeeecCCChh
Confidence 999999998765
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.20 E-value=9.5e-12 Score=147.09 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=36.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++.|++|+|+|+++.+|+..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 311 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGA 311 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCST
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccC
Confidence 4899999999999999999999999999999998888544
No 41
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.18 E-value=5.4e-10 Score=121.83 Aligned_cols=41 Identities=29% Similarity=0.528 Sum_probs=37.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
|+.+||+|||||++||+||+.|++.|++|+|+|+++.+|..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 45689999999999999999999999999999999888754
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.11 E-value=2.4e-11 Score=143.85 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=38.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..+||+|||||++|++||++|++.|++|+|+|+++.+|+.+.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS 304 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGAS 304 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccc
Confidence 358999999999999999999999999999999988886653
No 43
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.08 E-value=4.5e-09 Score=120.63 Aligned_cols=38 Identities=42% Similarity=0.620 Sum_probs=35.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..++|+|||||++||++|+.|++.|++|+|+|+++.++
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 35799999999999999999999999999999988654
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.04 E-value=3.9e-09 Score=115.14 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=36.1
Q ss_pred CCcEEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCChh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPLG 408 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~ 408 (752)
|++|+++++|++|..++++|.|++++.++.||.||+|+...
T Consensus 178 g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 178 GAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVW 218 (382)
T ss_dssp TCEEETTCCCCEEECSSSSEEEEETTEEEEEEEEEECCGGG
T ss_pred CCEEEcCCcEEEEEEECCEEEEEcCCceEEcCEEEECCChh
Confidence 88999999999999988888887765689999999999764
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.03 E-value=2.1e-09 Score=116.84 Aligned_cols=43 Identities=33% Similarity=0.440 Sum_probs=37.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceE
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYT 203 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T 203 (752)
..+++|+|||||++||++|++|+ .|++|+|+|+++.+|+....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~ 49 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTG 49 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccc
Confidence 34689999999999999999999 59999999999888866543
No 46
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.01 E-value=4.5e-08 Score=108.03 Aligned_cols=40 Identities=30% Similarity=0.373 Sum_probs=34.4
Q ss_pred CCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 159 EANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 159 ~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+.++|+|||||++||++|+.|++.|++|+|+|+.+.++
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 3567899999999999999999999999999999987654
No 47
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.00 E-value=5.4e-09 Score=112.88 Aligned_cols=42 Identities=33% Similarity=0.493 Sum_probs=38.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceE
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYT 203 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T 203 (752)
.+||+|||||++|++||++|++.|++|+|+|+++.+|+....
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~ 45 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSS 45 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCc
Confidence 579999999999999999999999999999999888766543
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.94 E-value=5.6e-09 Score=116.40 Aligned_cols=42 Identities=33% Similarity=0.466 Sum_probs=38.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GGr~~ 202 (752)
..+||+|||||++||+||++|++.|+ +|+|||+.+..||...
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~ 47 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISA 47 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcc
Confidence 35799999999999999999999999 9999999998877643
No 49
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.92 E-value=5.2e-08 Score=106.50 Aligned_cols=39 Identities=31% Similarity=0.569 Sum_probs=36.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGG 199 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 199 (752)
+.+||+|||||++|+++|+.|++.|++|+|+|+++.+|+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 357999999999999999999999999999999987775
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.92 E-value=1e-08 Score=113.90 Aligned_cols=41 Identities=32% Similarity=0.586 Sum_probs=37.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||+.|++.|++|+|+|+.+.+|+.+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 46799999999999999999999999999999999988765
No 51
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.86 E-value=1.3e-07 Score=104.50 Aligned_cols=36 Identities=39% Similarity=0.593 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.+||+|||||++||++|+.|++.|++|+|+|+.+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998643
No 52
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.84 E-value=2.8e-07 Score=104.75 Aligned_cols=39 Identities=44% Similarity=0.530 Sum_probs=35.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
...++|+|||||++||++|..|++.|++|+|+|+.+.++
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 457899999999999999999999999999999987664
No 53
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.84 E-value=1.3e-07 Score=109.26 Aligned_cols=38 Identities=34% Similarity=0.436 Sum_probs=33.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35799999999999999999999999999999987654
No 54
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.83 E-value=2.8e-07 Score=104.89 Aligned_cols=39 Identities=41% Similarity=0.535 Sum_probs=35.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.+.++|+|||||++||++|..|++.|++|+|+|+.+.++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT 47 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 457899999999999999999999999999999988664
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.79 E-value=9.1e-07 Score=102.56 Aligned_cols=39 Identities=31% Similarity=0.469 Sum_probs=35.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
++.+||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 557899999999999999999999999999999986544
No 56
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.77 E-value=6.6e-08 Score=106.40 Aligned_cols=43 Identities=12% Similarity=-0.018 Sum_probs=37.4
Q ss_pred cCCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCChhh
Q 004458 367 EGVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPLGV 409 (752)
Q Consensus 367 ~gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl~v 409 (752)
.+++|+++++|++|..++++|+|+. +|+++.||.||.|.....
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 4789999999999999988999876 777899999999986543
No 57
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.76 E-value=4.4e-08 Score=106.29 Aligned_cols=51 Identities=22% Similarity=0.297 Sum_probs=40.2
Q ss_pred HHHHHHHHc-CCcEEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCChhh
Q 004458 359 WRLIKALCE-GVPIFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPLGV 409 (752)
Q Consensus 359 ~~L~~aLa~-gl~I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~v 409 (752)
..+.+.+.+ |++|+++++|++|..+++++.|++++.++.||.||+|+....
T Consensus 153 ~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 153 KTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCeEEcCEEEEcCCccH
Confidence 344444433 889999999999999888888877555699999999998664
No 58
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.75 E-value=2.3e-08 Score=107.27 Aligned_cols=41 Identities=32% Similarity=0.578 Sum_probs=38.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.++|+|||||++||++|++|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999997653
No 59
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.75 E-value=8.6e-08 Score=105.20 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=40.1
Q ss_pred HHHHHHHHc-CCcEEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCChh
Q 004458 359 WRLIKALCE-GVPIFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPLG 408 (752)
Q Consensus 359 ~~L~~aLa~-gl~I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~ 408 (752)
..+.+.+.+ |++|+++++|++|..++++|.|.+++.++.||.||+|+...
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcC
Confidence 344444433 89999999999999988888887766689999999999654
No 60
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.74 E-value=1.4e-07 Score=102.86 Aligned_cols=42 Identities=12% Similarity=0.261 Sum_probs=37.2
Q ss_pred CCcEEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCChhh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPLGV 409 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl~v 409 (752)
|++|+++++|++|..+++++.|++++.++.||.||+|+....
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGGH
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCccH
Confidence 889999999999999888888888767899999999997653
No 61
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.73 E-value=1.9e-07 Score=101.66 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.0
Q ss_pred CCcEEcCceEEEEEecCCcEE-EEECCEEEEecEEEEcCChh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVE-VIAGDQMFQADMVLCTVPLG 408 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~-V~~~g~~~~AD~VV~AvPl~ 408 (752)
|++|+++++|++|..++++|. |++++.++.||.||+|+...
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAW 204 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGG
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchh
Confidence 899999999999999888887 87755589999999999755
No 62
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.72 E-value=2.1e-07 Score=106.10 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
.+||+|||||++||++|+.|++.|++|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 57999999999999999999999999999999874
No 63
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.70 E-value=6.8e-08 Score=106.80 Aligned_cols=40 Identities=38% Similarity=0.571 Sum_probs=37.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||+.|++.|.+|+|+|+++.+|+.+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 4799999999999999999999999999999999887654
No 64
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.69 E-value=2.4e-07 Score=105.63 Aligned_cols=41 Identities=39% Similarity=0.547 Sum_probs=38.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||++|++.|.+|+|+||.+.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45899999999999999999999999999999999999875
No 65
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.66 E-value=4e-07 Score=99.81 Aligned_cols=41 Identities=39% Similarity=0.388 Sum_probs=36.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHh-CC-CeEEEEcCCCCCCCCc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMS-FG-FKVVVLEGRSRPGGRV 201 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~-~g-~~v~v~E~~~~~GGr~ 201 (752)
...+||+|||||++|+++|++|++ .| ++|+|+|+.+ +|+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~ga 61 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAGGN 61 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTCSG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCCCc
Confidence 346899999999999999999999 99 9999999988 55533
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.62 E-value=4.4e-07 Score=104.95 Aligned_cols=42 Identities=33% Similarity=0.492 Sum_probs=38.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..+||+|||||++||+||+.|++.|.+|+|+|+.+.+||...
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~ 166 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAK 166 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchh
Confidence 367999999999999999999999999999999999988653
No 67
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.62 E-value=9.1e-08 Score=107.24 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=36.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
..+||+|||||++||+||+.|++.|.+|+|+|+.+.+|+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~ 64 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRK 64 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCce
Confidence 4589999999999999999999999999999999988754
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.61 E-value=2.9e-06 Score=98.26 Aligned_cols=41 Identities=39% Similarity=0.639 Sum_probs=37.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC------CCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF------GFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||+.|++. |++|+|+|+.+.+|+.+
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 357999999999999999999999 99999999999888753
No 69
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.61 E-value=5.3e-07 Score=104.13 Aligned_cols=41 Identities=29% Similarity=0.485 Sum_probs=38.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||+.|++.|.+|+|||+.+.+||..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45799999999999999999999999999999999998764
No 70
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.59 E-value=2.3e-06 Score=95.80 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.+||+|||||++|++||+.|++.|++|+|+|+.+.+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998754
No 71
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.58 E-value=4.8e-07 Score=99.01 Aligned_cols=36 Identities=36% Similarity=0.488 Sum_probs=33.3
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
++|+|||||++||++|..|++.|++|+|||+++.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 689999999999999999999999999999987543
No 72
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.55 E-value=2.2e-07 Score=102.22 Aligned_cols=40 Identities=35% Similarity=0.497 Sum_probs=36.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
..++|+|||||++||++|+.|++.|++|+|+|+++.++.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 4579999999999999999999999999999999877654
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.53 E-value=2.1e-07 Score=106.76 Aligned_cols=46 Identities=26% Similarity=0.555 Sum_probs=40.8
Q ss_pred CCcEEEECCChhHHHHHHHHH-hCCCeEEEEcCCCCCCCCceEEecC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLM-SFGFKVVVLEGRSRPGGRVYTQKMG 207 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~-~~g~~v~v~E~~~~~GGr~~T~~~~ 207 (752)
.++|+|||||++||+||+.|+ +.|++|+|+|+++.+||.++..+.+
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~yp 54 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYP 54 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCC
Confidence 579999999999999999999 9999999999999999876544444
No 74
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.52 E-value=6.4e-06 Score=96.44 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=34.2
Q ss_pred CCcEEEECCChhHHHHHHHHHh-CCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~G 198 (752)
.++|+|||||++||++|..|++ .|++|+|+|+++.++
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 5789999999999999999999 999999999987654
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.50 E-value=3.8e-07 Score=104.92 Aligned_cols=46 Identities=37% Similarity=0.538 Sum_probs=40.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEec
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKM 206 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~ 206 (752)
..++|+|||||++|++||++|++.|++|+|+|+++.+||.+...+.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~y 65 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRY 65 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 4579999999999999999999999999999999999987654333
No 76
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.49 E-value=4.6e-07 Score=104.04 Aligned_cols=42 Identities=40% Similarity=0.590 Sum_probs=39.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..++|+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 467999999999999999999999999999999999998664
No 77
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.49 E-value=5.2e-07 Score=99.61 Aligned_cols=38 Identities=34% Similarity=0.498 Sum_probs=34.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCe-EEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFK-VVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~-v~v~E~~~~~G 198 (752)
..++|+|||||++||++|..|++.|++ |+|+|+++.++
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 357999999999999999999999999 99999988765
No 78
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.49 E-value=9.6e-07 Score=106.65 Aligned_cols=37 Identities=27% Similarity=0.565 Sum_probs=33.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~ 197 (752)
..+||+|||||++|+++|++|++.|+ +|+|+|+++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 35799999999999999999999998 99999998764
No 79
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.48 E-value=2.3e-07 Score=98.84 Aligned_cols=43 Identities=30% Similarity=0.397 Sum_probs=37.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC----CCCCCce
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS----RPGGRVY 202 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~----~~GGr~~ 202 (752)
...++|+|||||++||+||++|++.|++|+|+|+.+ .+||.+.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~ 66 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLT 66 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccc
Confidence 456899999999999999999999999999999944 6776553
No 80
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.48 E-value=4.6e-07 Score=99.51 Aligned_cols=49 Identities=8% Similarity=0.253 Sum_probs=39.4
Q ss_pred HHHHHHHc--CCcEEcCceEEEEEecCCcE--EEEE-CCEEEEecEEEEcCChh
Q 004458 360 RLIKALCE--GVPIFYEKTVNTIKYGNEGV--EVIA-GDQMFQADMVLCTVPLG 408 (752)
Q Consensus 360 ~L~~aLa~--gl~I~ln~~V~~I~~~~~gv--~V~~-~g~~~~AD~VV~AvPl~ 408 (752)
.|.+.+.+ |++|+++++|++|..++++| .|+. +|++++||.||.|....
T Consensus 112 ~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 112 LVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp HHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred HHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCC
Confidence 34444444 68999999999999988888 8876 67789999999999653
No 81
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.47 E-value=6.6e-07 Score=97.65 Aligned_cols=40 Identities=30% Similarity=0.386 Sum_probs=35.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGG 199 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 199 (752)
+..++|+|||||++||++|+.|++.|++|+|+|+++.+++
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 3467999999999999999999999999999999887764
No 82
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.46 E-value=7.4e-07 Score=102.11 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=38.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
...+||+|||||++||+||+.|++.|++|+|+|+.+.+++|..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~ 147 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTK 147 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccccc
Confidence 3458999999999999999999999999999999998877653
No 83
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.45 E-value=8.1e-07 Score=99.16 Aligned_cols=41 Identities=34% Similarity=0.489 Sum_probs=35.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRSRPGGR 200 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~~~GGr 200 (752)
+..+||+|||||++|+++|++|++.| .+|+|+|++..+|+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g 62 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSG 62 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCC
Confidence 45689999999999999999999999 999999995556543
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.43 E-value=7.4e-07 Score=99.72 Aligned_cols=42 Identities=36% Similarity=0.548 Sum_probs=38.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~GGr~~ 202 (752)
..++|+|||||++||+||.+|++.|. +|+|+|+++.+||.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 35799999999999999999999999 9999999999998653
No 85
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.42 E-value=8.9e-07 Score=95.72 Aligned_cols=39 Identities=38% Similarity=0.626 Sum_probs=35.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GGr~ 201 (752)
.++|+|||||++|++||++|++.|+ +|+|+|+++ +||.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~ 43 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSF 43 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcc
Confidence 5799999999999999999999999 999999988 88743
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.41 E-value=6e-07 Score=94.79 Aligned_cols=39 Identities=36% Similarity=0.493 Sum_probs=36.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.++|+|||||++||+||++|++.|++|+|+|++ +||.+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 579999999999999999999999999999998 887654
No 87
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.38 E-value=5e-07 Score=104.25 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=36.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++|+++|+.|++.|++|+|+|+++..+|..
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 36899999999999999999999999999999997666543
No 88
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.38 E-value=3.6e-07 Score=102.66 Aligned_cols=100 Identities=25% Similarity=0.289 Sum_probs=65.3
Q ss_pred ccchhHHHHHHHHHHhhhccccCCCHHHH-hhhccchhHHHHHHHHHHHHHccccccccCCCCCCCCCCCCCCCcEEEEC
Q 004458 91 EQNDYIVVRNHILARWRGNVRVWLTKGQI-KETVSSEYEHLMNSAYDFLLYNGYINFGVAPSFTANMPEEANEGSVIIVG 169 (752)
Q Consensus 91 ~~~~yl~irn~i~~~w~~np~~~~t~~~~-~~~~~~~~~~l~~~~~~~l~~~g~in~G~~~~~~~~~~~~~~~~~v~ViG 169 (752)
+.|.|+.|..++|.. -.-+...|++... .+.+.. ..+-+++.++....|+. +. ..+.....++|+|||
T Consensus 61 ~~n~~p~~~grvCp~-~~~Ce~~C~~~~~~~~~v~I--~~le~~~~~~~~~~~~~-----~~---~~~~~~~~~~V~IIG 129 (456)
T 2vdc_G 61 ATNNFPEICGRICPQ-DRLCEGNCVIEQSTHGAVTI--GSVEKYINDTAWDQGWV-----KP---RTPSRELGLSVGVIG 129 (456)
T ss_dssp HHCSCHHHHHHHCCG-GGSGGGGCGGGGSSSCSCCH--HHHHHHHHHHHHHHTCC-----CC---CCSCSSCCCCEEEEC
T ss_pred hhCCCCccccccCCC-CcchHHhcccCCCCCCCccH--HHHHHHHHHHHHHcCCC-----CC---CCCcCCCCCEEEEEC
Confidence 347777777777732 0012223555543 344433 34455555554444542 11 111224578999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 170 AGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 170 aG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
||++||+||++|++.|++|+|+|+.+++||..
T Consensus 130 gGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 130 AGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 99999999999999999999999999999865
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.37 E-value=1.1e-06 Score=100.91 Aligned_cols=42 Identities=29% Similarity=0.486 Sum_probs=38.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..++|+|||||++|++||++|++.|++|+|+|+++.+||.++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 457999999999999999999999999999999999998654
No 90
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.37 E-value=1.5e-06 Score=99.97 Aligned_cols=38 Identities=29% Similarity=0.331 Sum_probs=35.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGG 199 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 199 (752)
.++|+|||||++||++|..|++.|++|+|+|+++.++.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 46999999999999999999999999999999987653
No 91
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.33 E-value=1.1e-05 Score=94.89 Aligned_cols=36 Identities=44% Similarity=0.559 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHh-----CCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS-----FGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~-----~g~~v~v~E~~~~~ 197 (752)
.++|+|||||++||++|..|++ .|++|+|+|+++..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5799999999999999999999 99999999998643
No 92
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.30 E-value=5.1e-06 Score=96.01 Aligned_cols=41 Identities=44% Similarity=0.647 Sum_probs=38.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..++|+|||||++||+||+.|++.|++|+|+|+.+.+||..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 35799999999999999999999999999999999998865
No 93
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.27 E-value=4e-07 Score=97.39 Aligned_cols=42 Identities=40% Similarity=0.628 Sum_probs=38.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHh--CCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMS--FGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~--~g~~v~v~E~~~~~GGr~~ 202 (752)
..+||+|||||++||+||++|++ .|++|+|+|+.+.+||.++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 36799999999999999999975 5999999999999999875
No 94
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.24 E-value=4.2e-06 Score=88.21 Aligned_cols=38 Identities=34% Similarity=0.524 Sum_probs=34.9
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCCCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRPGGRV 201 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GGr~ 201 (752)
++|+|||||++||+||++|++.|+ +|+|+|++ .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 689999999999999999999999 99999994 678765
No 95
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.15 E-value=2.1e-05 Score=90.04 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~ 195 (752)
.++|+|||||++|+++|+.|++ .|++|+|+|+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999999 999999999965
No 96
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.06 E-value=2e-06 Score=90.82 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=34.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
|+.+||+|||||++||+||.+|++.|++|+|+|+. .+||.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 67899999999999999999999999999999986 45654
No 97
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.04 E-value=2.3e-06 Score=90.44 Aligned_cols=40 Identities=35% Similarity=0.543 Sum_probs=36.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||.+|++.|++|+|+|+ +.+||.+.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 58999999999999999999999999999998 46888763
No 98
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.99 E-value=7.3e-06 Score=100.98 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=69.1
Q ss_pred ccchhHHHHHHHHHHhhhccccCCCHHHH-hhhccchhHHHHHHHHHHHHHccccccccCCCCCC--CCCCCCCCCcEEE
Q 004458 91 EQNDYIVVRNHILARWRGNVRVWLTKGQI-KETVSSEYEHLMNSAYDFLLYNGYINFGVAPSFTA--NMPEEANEGSVII 167 (752)
Q Consensus 91 ~~~~yl~irn~i~~~w~~np~~~~t~~~~-~~~~~~~~~~l~~~~~~~l~~~g~in~G~~~~~~~--~~~~~~~~~~v~V 167 (752)
+.|.|..|..++| -|..-+...|++... .+.+. -..|-+++.++....|+...- .|.... ..+. ...++|+|
T Consensus 118 ~~n~~p~~~grvC-p~~~~Ce~~C~~~~~~~~pv~--I~~le~~~~d~~~~~~~~~~~-~p~~~~~~~~~~-~~~~~VvV 192 (1025)
T 1gte_A 118 SDNPLGLTCGMVC-PTSDLCVGGCNLYATEEGSIN--IGGLQQFASEVFKAMNIPQIR-NPCLPSQEKMPE-AYSAKIAL 192 (1025)
T ss_dssp HHCTTHHHHHHHC-CGGGSGGGGCGGGGSTTCCCC--HHHHHHHHHHHHHHHTCCCCC-CTTSCCGGGSCG-GGGCCEEE
T ss_pred hcCChhHhhcCCC-CChhhHHhhCccCCCCCCCcc--HhHHHHHHHHHHHHhCCcccc-CccccccccCCc-cCCCEEEE
Confidence 4577888888877 333344444555432 23333 345677777776665653210 010000 0111 34679999
Q ss_pred ECCChhHHHHHHHHHhCCC-eEEEEcCCCCCCCCc
Q 004458 168 VGAGLAGLAAAKQLMSFGF-KVVVLEGRSRPGGRV 201 (752)
Q Consensus 168 iGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GGr~ 201 (752)
||||++||+||++|++.|+ +|+|+|+.+.+||..
T Consensus 193 IGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 193 LGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp ECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred ECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 9999999999999999999 799999999999964
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.95 E-value=4.4e-06 Score=88.09 Aligned_cols=34 Identities=35% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+||+|||||+|||+||.+|++.|++|+|+|+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4899999999999999999999999999999965
No 100
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.88 E-value=6.3e-06 Score=93.29 Aligned_cols=42 Identities=33% Similarity=0.529 Sum_probs=37.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
+..+||+|||||++||+||..|++.|++|+|+|+++.+||.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTC 64 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 556899999999999999999999999999999999999865
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.88 E-value=6.8e-06 Score=86.14 Aligned_cols=41 Identities=39% Similarity=0.675 Sum_probs=37.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhC-CCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF-GFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||+.|++. |.+|+|+|+.+.+||.++
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~ 80 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAW 80 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTT
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCcee
Confidence 57999999999999999999997 999999999999987543
No 102
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.87 E-value=6.9e-06 Score=87.02 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=37.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.++|+|||||++||+||++|++.|++|+|+|+++.+||.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999998766
No 103
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.86 E-value=6.7e-06 Score=88.76 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=38.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||++|++.|++|+|+|+++.+||.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 46899999999999999999999999999999999888765
No 104
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.86 E-value=5.7e-06 Score=88.11 Aligned_cols=40 Identities=33% Similarity=0.498 Sum_probs=37.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.++|+|||||++|++||++|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 5799999999999999999999999999999999888755
No 105
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.85 E-value=1.2e-05 Score=86.86 Aligned_cols=36 Identities=28% Similarity=0.510 Sum_probs=33.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..+||+|||||++|+++|++|++.|++|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 357999999999999999999999999999999773
No 106
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.84 E-value=7.2e-06 Score=86.15 Aligned_cols=41 Identities=39% Similarity=0.521 Sum_probs=37.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEE-EcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVV-LEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v-~E~~~~~GGr~~ 202 (752)
.+++|+|||||++||+||++|++.|++|+| +|+ +.+||.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 357999999999999999999999999999 999 77888753
No 107
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.83 E-value=1.2e-05 Score=91.88 Aligned_cols=36 Identities=42% Similarity=0.611 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+||+|||||++|++||..|++.|.+|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999965
No 108
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.80 E-value=1.1e-05 Score=86.62 Aligned_cols=41 Identities=37% Similarity=0.715 Sum_probs=37.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||++|++. |++|+|+|+.+.+||.++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 57999999999999999999997 999999999999987654
No 109
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.80 E-value=1.6e-05 Score=93.88 Aligned_cols=44 Identities=41% Similarity=0.641 Sum_probs=40.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceE
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYT 203 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T 203 (752)
...++|+|||||++||+||++|++.|++|+|+|+++++||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 45689999999999999999999999999999999999998653
No 110
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.78 E-value=1e-05 Score=91.51 Aligned_cols=39 Identities=28% Similarity=0.507 Sum_probs=36.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++||+||++|++.|++|+|+|+ +.+||.+
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 64 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTC 64 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCce
Confidence 57999999999999999999999999999999 7788755
No 111
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.77 E-value=1.3e-05 Score=84.77 Aligned_cols=39 Identities=41% Similarity=0.609 Sum_probs=35.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++.|++|+|+|+ ..+||.+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 57999999999999999999999999999999 5678765
No 112
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.75 E-value=1.7e-05 Score=89.28 Aligned_cols=41 Identities=29% Similarity=0.481 Sum_probs=38.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||++|++.|++|+|+|+++.+||+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 36899999999999999999999999999999999888765
No 113
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.75 E-value=1.2e-05 Score=90.51 Aligned_cols=41 Identities=27% Similarity=0.474 Sum_probs=38.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999997653
No 114
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.73 E-value=2.8e-05 Score=92.41 Aligned_cols=43 Identities=40% Similarity=0.623 Sum_probs=40.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
...++|+|||||++||+||++|++.|++|+|+|+++.+||.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 4568999999999999999999999999999999999999864
No 115
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.73 E-value=1.2e-05 Score=90.27 Aligned_cols=39 Identities=26% Similarity=0.501 Sum_probs=36.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++||+||++|++.|++|+|+|+ +.+||.+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTC 43 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcc
Confidence 57999999999999999999999999999999 7788765
No 116
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.73 E-value=1.7e-05 Score=84.24 Aligned_cols=41 Identities=34% Similarity=0.535 Sum_probs=37.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..++|+|||||++||+||.+|++.|++|+|+|++ .+||.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 3579999999999999999999999999999998 6887653
No 117
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.73 E-value=1.2e-05 Score=86.46 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=32.6
Q ss_pred CcEEEECCChhHHHHHHHHHhCC------CeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG------FKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g------~~v~v~E~~~~~G 198 (752)
+||+|||||++||++|++|++.| .+|+|+|+....+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~ 42 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPL 42 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCC
Confidence 48999999999999999999998 9999999987433
No 118
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.73 E-value=1.7e-05 Score=84.61 Aligned_cols=41 Identities=41% Similarity=0.652 Sum_probs=37.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||++|++. |++|+|+|+.+.+||..+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 57999999999999999999998 999999999999987654
No 119
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.72 E-value=2.2e-05 Score=89.09 Aligned_cols=36 Identities=25% Similarity=0.511 Sum_probs=33.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
+.+||+|||||++|+++|++|++.|++|+|+|+.+.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 357999999999999999999999999999999863
No 120
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.71 E-value=2.6e-05 Score=89.03 Aligned_cols=42 Identities=24% Similarity=0.380 Sum_probs=38.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
...+||+|||||++|++||++|++.|++|+|+|+++.+||.+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSC 82 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 346899999999999999999999999999999998888755
No 121
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=2.3e-05 Score=88.05 Aligned_cols=41 Identities=37% Similarity=0.656 Sum_probs=38.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++|++||.+|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 46899999999999999999999999999999998899865
No 122
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.70 E-value=2.4e-05 Score=79.35 Aligned_cols=35 Identities=34% Similarity=0.408 Sum_probs=32.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+.+||+|||||++|++||..|++.|.+|+|+|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 45799999999999999999999999999999984
No 123
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.69 E-value=1.9e-05 Score=88.76 Aligned_cols=40 Identities=28% Similarity=0.513 Sum_probs=37.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
++||+|||||++|++||.+|++.|++|+|+|+++.+||.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 41 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTC 41 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcC
Confidence 4799999999999999999999999999999998898765
No 124
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.67 E-value=2.3e-05 Score=81.54 Aligned_cols=35 Identities=34% Similarity=0.459 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
+++|+|||||++||+||++|++.|++|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 46999999999999999999999999999999763
No 125
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.66 E-value=2.7e-05 Score=87.48 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=37.6
Q ss_pred CcEEEECCChhHHHHHHHHHh---CCCe---EEEEcCCCCCCCCce
Q 004458 163 GSVIIVGAGLAGLAAAKQLMS---FGFK---VVVLEGRSRPGGRVY 202 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~---~g~~---v~v~E~~~~~GGr~~ 202 (752)
++|+|||||++||+||.+|++ .|++ |+|+|+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 689999999999999999999 9999 999999999998764
No 126
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.66 E-value=3.5e-05 Score=87.44 Aligned_cols=40 Identities=35% Similarity=0.527 Sum_probs=36.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGG 199 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 199 (752)
...++|+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 3468999999999999999999999999999999988764
No 127
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.65 E-value=3e-05 Score=84.61 Aligned_cols=35 Identities=29% Similarity=0.438 Sum_probs=33.0
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRP 197 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~ 197 (752)
++|+|||||++||++|..|++. |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998876
No 128
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.64 E-value=1.8e-05 Score=83.62 Aligned_cols=40 Identities=28% Similarity=0.517 Sum_probs=35.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..++|+|||||++|++||++|++.|++|+|+|+. .+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 43 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQL 43 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceE
Confidence 3579999999999999999999999999999974 678754
No 129
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.64 E-value=2.6e-05 Score=82.85 Aligned_cols=40 Identities=33% Similarity=0.482 Sum_probs=35.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcC----CCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEG----RSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~----~~~~GGr~ 201 (752)
.++|+|||||++|+++|++|++.|++|+|+|+ ...+||.+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~ 51 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQL 51 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCcee
Confidence 57999999999999999999999999999999 45566654
No 130
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.64 E-value=2.9e-05 Score=82.84 Aligned_cols=41 Identities=32% Similarity=0.441 Sum_probs=36.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
...++|+|||||++|++||++|++.|++|+|+|+. .+||.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 34689999999999999999999999999999975 677754
No 131
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.63 E-value=2.8e-05 Score=84.98 Aligned_cols=35 Identities=34% Similarity=0.521 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
.++|+|||||++||++|+.|++.|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 36899999999999999999999999999999874
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.62 E-value=1.9e-05 Score=88.88 Aligned_cols=41 Identities=32% Similarity=0.571 Sum_probs=37.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++|++||.+|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 35799999999999999999999999999999998898765
No 133
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.61 E-value=1.9e-05 Score=88.91 Aligned_cols=40 Identities=28% Similarity=0.566 Sum_probs=36.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++||+||+.|++.|++|+|+|++ .+||.+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcc
Confidence 4689999999999999999999999999999975 788765
No 134
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.61 E-value=3.2e-05 Score=86.00 Aligned_cols=34 Identities=35% Similarity=0.410 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+++|+|||||++||++|+.|++.|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999976
No 135
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.61 E-value=3.1e-05 Score=85.23 Aligned_cols=38 Identities=26% Similarity=0.426 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPGG 199 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~GG 199 (752)
.+||+|||||++|+++|++|++. |++|+|+|+.+..+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 47999999999999999999999 999999999764443
No 136
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.60 E-value=3e-05 Score=86.83 Aligned_cols=39 Identities=33% Similarity=0.532 Sum_probs=36.8
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
+||+|||||++|++||.+|++.|++|+|+|+++.+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~ 40 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTC 40 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcc
Confidence 689999999999999999999999999999998898765
No 137
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.59 E-value=4.4e-05 Score=88.14 Aligned_cols=38 Identities=29% Similarity=0.452 Sum_probs=34.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGG 199 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 199 (752)
.+||+|||||++|+++|++|++.|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999875444
No 138
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.59 E-value=3.4e-05 Score=87.17 Aligned_cols=33 Identities=33% Similarity=0.517 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEG 193 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~ 193 (752)
..+||+|||||++||+||..|++.|++|+|+|+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 468999999999999999999999999999998
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.56 E-value=4.6e-05 Score=85.59 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=37.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
..+||+|||||++|++||++|++.|++|+|+|++ .+||.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 3579999999999999999999999999999997 7887653
No 140
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.56 E-value=0.00016 Score=82.13 Aligned_cols=42 Identities=19% Similarity=0.023 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..-+||||||+|++||++|..|.+.|...+++|+.+..|+-.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 345799999999999999999999988888888877766543
No 141
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.55 E-value=3.6e-05 Score=86.64 Aligned_cols=40 Identities=35% Similarity=0.627 Sum_probs=37.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 4799999999999999999999999999999988888754
No 142
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.55 E-value=3.5e-05 Score=87.17 Aligned_cols=40 Identities=28% Similarity=0.428 Sum_probs=35.7
Q ss_pred CCcEEEECCChhHHHHHHHHHh-CCCeEEEEc--------CCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLE--------GRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E--------~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++ .|++|+|+| +.+.+||.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccc
Confidence 5799999999999999999999 999999999 356777754
No 143
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.54 E-value=3e-05 Score=87.50 Aligned_cols=40 Identities=28% Similarity=0.596 Sum_probs=36.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++|++||++|++.|++|+|+|++ .+||.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTC 49 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcC
Confidence 3589999999999999999999999999999997 678765
No 144
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.53 E-value=3e-05 Score=87.00 Aligned_cols=39 Identities=28% Similarity=0.480 Sum_probs=35.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999997 677654
No 145
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.53 E-value=3.7e-05 Score=86.32 Aligned_cols=39 Identities=33% Similarity=0.609 Sum_probs=35.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++.|++|+|+|++ .+||.+
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTC 42 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcC
Confidence 579999999999999999999999999999997 678754
No 146
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.52 E-value=7.2e-05 Score=88.05 Aligned_cols=43 Identities=33% Similarity=0.505 Sum_probs=39.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
...++|+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 3468999999999999999999999999999999999999764
No 147
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.51 E-value=4.3e-05 Score=86.53 Aligned_cols=39 Identities=33% Similarity=0.450 Sum_probs=35.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++||+||.+|++.|++|+|+|++ .+||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999996 488765
No 148
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.51 E-value=3.4e-05 Score=86.31 Aligned_cols=39 Identities=26% Similarity=0.515 Sum_probs=36.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++.|++|+|+|++ .+||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTC 42 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcc
Confidence 579999999999999999999999999999997 678765
No 149
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.51 E-value=3.8e-05 Score=86.67 Aligned_cols=40 Identities=33% Similarity=0.475 Sum_probs=37.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 5799999999999999999999999999999988888754
No 150
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.50 E-value=7.3e-05 Score=72.16 Aligned_cols=33 Identities=48% Similarity=0.687 Sum_probs=31.8
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 689999999999999999999999999999987
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.49 E-value=5.8e-05 Score=79.30 Aligned_cols=37 Identities=38% Similarity=0.503 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
+||+|||||++||+||.+|++.|++|+|+|+ ++||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~ 38 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQI 38 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCcee
Confidence 6899999999999999999999999999985 467765
No 152
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=4.2e-05 Score=85.76 Aligned_cols=40 Identities=30% Similarity=0.572 Sum_probs=37.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++|++||.+|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 57999999999999999999999999999999 77888763
No 153
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.48 E-value=6.4e-05 Score=84.77 Aligned_cols=34 Identities=35% Similarity=0.489 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+||+|||||++|++||++|++.|++|+|+|+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999963
No 154
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.47 E-value=0.0001 Score=83.69 Aligned_cols=34 Identities=35% Similarity=0.436 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~ 195 (752)
.++|+|||||++|+++|+.|++ .|++|+|+|+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3699999999999999999999 999999999975
No 155
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.47 E-value=5.3e-05 Score=87.71 Aligned_cols=39 Identities=28% Similarity=0.330 Sum_probs=35.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
.+||+|||||++||+||++|++.|.+|+|+|+.+..||.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 579999999999999999999999999999999877654
No 156
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.46 E-value=6.6e-05 Score=86.01 Aligned_cols=38 Identities=34% Similarity=0.528 Sum_probs=34.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
.+||+|||||++||+||++|++ |.+|+|+|+.+..||.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 5799999999999999999999 9999999999877654
No 157
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.46 E-value=6.3e-05 Score=84.56 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
+++|+|||||++||+||++|++. |++|+|+|+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 46999999999999999999998 99999999998765
No 158
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.45 E-value=4.8e-05 Score=86.24 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=36.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhC---CCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF---GFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~---g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++. |++|+|+|+++ +||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~ 43 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAA 43 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcc
Confidence 47999999999999999999999 99999999988 88754
No 159
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.45 E-value=5.4e-05 Score=84.87 Aligned_cols=42 Identities=31% Similarity=0.328 Sum_probs=38.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHh-C------CCeEEEEcCCCCCCCCce
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMS-F------GFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~-~------g~~v~v~E~~~~~GGr~~ 202 (752)
..++|+|||||++|++||.+|++ . |++|+|+|+.+.+||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 35799999999999999999999 7 999999999999998763
No 160
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.44 E-value=6.6e-05 Score=87.96 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=35.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
.+||+|||||++||+||++|++.|.+|+|+|+....+|.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 579999999999999999999999999999998866554
No 161
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.44 E-value=8.6e-05 Score=82.88 Aligned_cols=38 Identities=29% Similarity=0.494 Sum_probs=34.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
++++|+|||||++||+||++|++. |++|+|+|+++.++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 357999999999999999999998 88999999998765
No 162
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.44 E-value=0.00018 Score=82.07 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHh------------CCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS------------FGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~------------~g~~v~v~E~~~ 195 (752)
.++|+|||||++|+++|..|++ .|++|+|+|+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 5799999999999999999999 999999999865
No 163
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.43 E-value=0.00012 Score=79.50 Aligned_cols=40 Identities=38% Similarity=0.444 Sum_probs=35.9
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
++|+|||||++|+.||++|++.|++|+|+|+++..+..++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 6899999999999999999999999999999887665443
No 164
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.43 E-value=6.4e-05 Score=87.42 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=36.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
..+||+|||||++||+||++|++.|.+|+|+|+....||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 3579999999999999999999999999999998766654
No 165
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.43 E-value=6.3e-05 Score=85.30 Aligned_cols=39 Identities=33% Similarity=0.543 Sum_probs=35.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||.+|++.|++|+|+|++ .+||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccc
Confidence 479999999999999999999999999999998 478755
No 166
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.42 E-value=6.2e-05 Score=84.17 Aligned_cols=39 Identities=36% Similarity=0.541 Sum_probs=35.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
++||+|||||++|++||.+|++.|++|+|+|+. .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 479999999999999999999999999999997 788754
No 167
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.42 E-value=9.4e-05 Score=86.18 Aligned_cols=41 Identities=29% Similarity=0.435 Sum_probs=37.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..+||+|||||++|++||+.|++.|++|+|+|+.+..||..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35799999999999999999999999999999999888744
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.40 E-value=0.0001 Score=83.00 Aligned_cols=36 Identities=39% Similarity=0.633 Sum_probs=33.1
Q ss_pred cEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q 004458 164 SVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 164 ~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr 200 (752)
||+|||||++||+||++|++.|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 6999999999999999999999999999998 56654
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.40 E-value=6.7e-05 Score=83.89 Aligned_cols=39 Identities=23% Similarity=0.190 Sum_probs=36.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC-----CeEEEEcCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG-----FKVVVLEGRSRPGG 199 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g-----~~v~v~E~~~~~GG 199 (752)
..+||+|||||++||+||.+|++.| .+|+|+|+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 3569999999999999999999999 99999999998883
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.39 E-value=0.00075 Score=73.51 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||+|++|+.+|..|++.|.+|+|+|+.+++.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM 181 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh
Confidence 4689999999999999999999999999999977543
No 171
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.38 E-value=7e-05 Score=84.06 Aligned_cols=39 Identities=31% Similarity=0.533 Sum_probs=35.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
.+||+|||||++|++||..|++.|++|+|+|+++ +||.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 5799999999999999999999999999999987 78654
No 172
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.37 E-value=5.7e-05 Score=85.56 Aligned_cols=40 Identities=28% Similarity=0.479 Sum_probs=35.0
Q ss_pred CCcEEEECCChhHHHHHHHHHh-CCCeEEEEc--------CCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLE--------GRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E--------~~~~~GGr~ 201 (752)
.+||+|||||++|++||++|++ .|++|+|+| +++.+||.+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~ 55 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTC 55 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCee
Confidence 5799999999999999999999 999999999 355666644
No 173
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.36 E-value=7.7e-05 Score=84.44 Aligned_cols=40 Identities=35% Similarity=0.619 Sum_probs=37.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||++|++. ++|+|+|+++++||...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 46899999999999999999999 99999999999999865
No 174
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.35 E-value=0.00011 Score=82.02 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=34.2
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
++|+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 6999999999999999999998 89999999999877
No 175
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.35 E-value=0.00012 Score=84.47 Aligned_cols=39 Identities=28% Similarity=0.416 Sum_probs=35.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC-CCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS-RPGG 199 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~-~~GG 199 (752)
..+||+|||||++|++||++|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 36899999999999999999999999999999984 5653
No 176
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.35 E-value=0.00012 Score=84.66 Aligned_cols=39 Identities=15% Similarity=0.253 Sum_probs=36.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
+.+++|+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5578999999999999999999998 89999999999876
No 177
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.35 E-value=9.8e-05 Score=90.37 Aligned_cols=41 Identities=41% Similarity=0.698 Sum_probs=39.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCce
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVY 202 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~ 202 (752)
.+||+|||||++||+||.+|++.|++|+|+|+++++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57899999999999999999999999999999999999987
No 178
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.31 E-value=0.00012 Score=81.17 Aligned_cols=39 Identities=26% Similarity=0.464 Sum_probs=35.5
Q ss_pred CCcEEEECCChhHHHHHHHHHh--CCCeEEEEcCCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS--FGFKVVVLEGRSRPGGR 200 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~--~g~~v~v~E~~~~~GGr 200 (752)
.++|+|||||++||+||++|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3689999999999999999999 88999999999987654
No 179
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.31 E-value=0.00017 Score=79.33 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=34.0
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRSRPGG 199 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~GG 199 (752)
++|+|||||++||+||++|++.|+ +|+|+|+++..+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 689999999999999999999999 8999999986653
No 180
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.30 E-value=0.00013 Score=81.82 Aligned_cols=40 Identities=30% Similarity=0.425 Sum_probs=37.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCCCCCCc
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSRPGGRV 201 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GGr~ 201 (752)
.++|+|||||++|++||.+|++.| ++|+|+|+.+.+||.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 579999999999999999999998 9999999999999876
No 181
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.30 E-value=0.00016 Score=82.95 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~ 195 (752)
.++|+|||||++|++||..|++ .|++|+|+|+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5799999999999999999999 999999999965
No 182
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.30 E-value=0.00014 Score=84.33 Aligned_cols=40 Identities=28% Similarity=0.341 Sum_probs=35.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC-CCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS-RPGG 199 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~-~~GG 199 (752)
...+||+|||||++|++||++|++.|.+|+|+|++. .+|+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 346899999999999999999999999999999975 4554
No 183
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.29 E-value=9.4e-05 Score=81.38 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=33.2
Q ss_pred CcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~~~G 198 (752)
++|+|||||++||+||++|++ .|++|+|+|+++..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~ 40 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSY 40 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCce
Confidence 589999999999999999999 899999999998543
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.28 E-value=0.00016 Score=82.50 Aligned_cols=39 Identities=38% Similarity=0.502 Sum_probs=35.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCc
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~ 201 (752)
..++|+|||||++|++||.+|++.|++|+|+|+ ++||.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 468999999999999999999999999999986 577765
No 185
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.26 E-value=0.00012 Score=84.87 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=35.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSRPGGR 200 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GGr 200 (752)
.+||+|||||++||+||+.|++.| .+|+|+|+....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 479999999999999999999999 999999998766653
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.25 E-value=0.00017 Score=79.59 Aligned_cols=39 Identities=36% Similarity=0.470 Sum_probs=35.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCe--EEEEcCCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFK--VVVLEGRSRPGG 199 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~--v~v~E~~~~~GG 199 (752)
++++|+|||||++||+||++|++.|++ |+|+|+++.++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 48 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY 48 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc
Confidence 457999999999999999999999987 999999987664
No 187
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.23 E-value=0.00018 Score=83.36 Aligned_cols=38 Identities=32% Similarity=0.421 Sum_probs=34.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC-CCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS-RPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~-~~G 198 (752)
..+||+|||||++|++||++|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46899999999999999999999999999999974 454
No 188
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.20 E-value=0.00022 Score=83.57 Aligned_cols=37 Identities=19% Similarity=0.356 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhC------CCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF------GFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~G 198 (752)
.+||+|||||++||+||++|++. |.+|+|+|+....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 57999999999999999999997 99999999987544
No 189
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.20 E-value=0.0015 Score=73.04 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 205 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 4689999999999999999999999999999987543
No 190
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.19 E-value=0.00021 Score=82.78 Aligned_cols=34 Identities=35% Similarity=0.566 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+||+|||||++||+||.+|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999983
No 191
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.15 E-value=0.00028 Score=82.54 Aligned_cols=36 Identities=31% Similarity=0.495 Sum_probs=33.1
Q ss_pred CCCcEEEECCChhHHHHHHHHH---h-CCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLM---S-FGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~---~-~g~~v~v~E~~~~ 196 (752)
..+||+|||||++||+||++|+ + .|.+|+|+||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4589999999999999999999 6 8999999999875
No 192
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.14 E-value=0.00026 Score=81.27 Aligned_cols=36 Identities=17% Similarity=0.303 Sum_probs=33.9
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
++|+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5899999999999999999998 89999999999876
No 193
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.11 E-value=0.00031 Score=76.91 Aligned_cols=39 Identities=23% Similarity=0.347 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++.+|+|||||+||++||..|...+.+|+|+|+++.++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 456799999999999999999988899999999998755
No 194
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.11 E-value=0.00032 Score=77.25 Aligned_cols=37 Identities=24% Similarity=0.460 Sum_probs=34.1
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCe--EEEEcCCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFK--VVVLEGRSRPGG 199 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~--v~v~E~~~~~GG 199 (752)
++|+|||||++|++||++|++.|++ |+|+|+++.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 5899999999999999999999987 999999987663
No 195
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.11 E-value=0.00029 Score=78.62 Aligned_cols=36 Identities=31% Similarity=0.252 Sum_probs=33.2
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
+||+|||||++|++||.+|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 4899999999999999999998 99999999988654
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.10 E-value=0.0014 Score=73.00 Aligned_cols=37 Identities=32% Similarity=0.545 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 185 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL 185 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc
Confidence 4699999999999999999999999999999987554
No 197
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.10 E-value=0.0045 Score=68.91 Aligned_cols=40 Identities=28% Similarity=0.342 Sum_probs=35.1
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++|+++++|++|+.+++++.|+. +++++.||.||+|+..
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGR 262 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCC
Confidence 789999999999998888888765 7788999999999863
No 198
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.09 E-value=0.00031 Score=78.30 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=33.2
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999988655
No 199
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.07 E-value=0.00025 Score=81.15 Aligned_cols=34 Identities=24% Similarity=0.505 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.|||+|||||++|++||..+++.|.+|+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 5899999999999999999999999999999754
No 200
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.02 E-value=0.003 Score=70.34 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 468999999999999999999999999999997754
No 201
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.02 E-value=0.00058 Score=75.79 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~G 198 (752)
.++|+|||||++|++||..|++.|+ +|+|+|+.+.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 5799999999999999999999998 799999987644
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.01 E-value=0.00041 Score=78.14 Aligned_cols=37 Identities=30% Similarity=0.354 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
.+||+|||||++|++||.+|++. |.+|+|+|+++..|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 46999999999999999999996 89999999987654
No 203
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.01 E-value=0.00036 Score=78.92 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=34.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRPG 198 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~G 198 (752)
+..++|+|||||++|++||..|.+. |.+|+|+|+++.++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4568999999999999999999887 88999999998765
No 204
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.01 E-value=0.0053 Score=68.64 Aligned_cols=36 Identities=39% Similarity=0.506 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 468999999999999999999999999999987653
No 205
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.00 E-value=0.00045 Score=76.05 Aligned_cols=38 Identities=24% Similarity=0.455 Sum_probs=33.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~G 198 (752)
..++|+|||||++|++||.+|++.|+ +|+|+|+++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 45799999999999999999999998 499999987543
No 206
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.98 E-value=0.00042 Score=78.26 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=34.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC---CeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG---FKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g---~~v~v~E~~~~~G 198 (752)
..++|+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 3589999999999999999999988 9999999987654
No 207
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.95 E-value=0.0005 Score=76.38 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHh---CCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS---FGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~---~g~~v~v~E~~~~ 196 (752)
+++|+|||||++|++||++|++ .|++|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 4699999999999999999999 8999999999874
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.94 E-value=0.00055 Score=74.29 Aligned_cols=35 Identities=37% Similarity=0.532 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||++|++||..|++.| +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 569999999999999999999999 99999997743
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.92 E-value=0.00057 Score=74.72 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~ 196 (752)
.++|+|||||++|++||.+|++.| .+|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 468999999999999999999876 58999999874
No 210
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.91 E-value=0.00062 Score=74.18 Aligned_cols=34 Identities=21% Similarity=0.501 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~ 195 (752)
.++|+|||||++|++||.+|++.| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 479999999999999999999999 5699999875
No 211
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.91 E-value=0.0052 Score=68.88 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999987654
No 212
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.90 E-value=0.0005 Score=77.98 Aligned_cols=39 Identities=21% Similarity=0.446 Sum_probs=34.7
Q ss_pred CCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 158 EEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 158 ~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
...++++|||||||.+|+++|..|.+.+++|+|+|+++.
T Consensus 38 ~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 38 QHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 334567999999999999999999999999999999873
No 213
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.87 E-value=0.00053 Score=76.28 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=31.5
Q ss_pred CcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~G 198 (752)
++|+|||||++|++||.+|++.| .+|+|+|+++..+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS 38 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 47999999999999999999988 4799999977543
No 214
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.80 E-value=0.0069 Score=68.26 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=34.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA 210 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 5689999999999999999999999999999987643
No 215
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.80 E-value=0.00079 Score=77.08 Aligned_cols=36 Identities=42% Similarity=0.511 Sum_probs=33.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..+||||||||++|+++|.+|++.|++|+|||+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999764
No 216
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.80 E-value=0.0059 Score=67.07 Aligned_cols=36 Identities=36% Similarity=0.630 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 568999999999999999999999999999997754
No 217
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.79 E-value=0.0055 Score=68.17 Aligned_cols=36 Identities=28% Similarity=0.378 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 468999999999999999999999999999997754
No 218
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.012 Score=66.06 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-.|..|++.|.+|+++|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 468999999999999999999999999999997754
No 219
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.76 E-value=0.00086 Score=74.33 Aligned_cols=34 Identities=26% Similarity=0.579 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRSR 196 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~~ 196 (752)
++|+|||||++|++||++|++.+ ++|+|+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 58999999999999999999875 79999999874
No 220
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.75 E-value=0.007 Score=66.23 Aligned_cols=36 Identities=33% Similarity=0.482 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.++|+|||+|.+|+-+|..|.+.|.+|+++|+.+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 468999999999999999999999999999987654
No 221
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.72 E-value=0.0041 Score=68.34 Aligned_cols=36 Identities=31% Similarity=0.514 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 568999999999999999999999999999987643
No 222
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.69 E-value=0.0061 Score=67.82 Aligned_cols=36 Identities=22% Similarity=0.493 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-.|..|++.|.+|+++|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 458999999999999999999999999999997654
No 223
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.65 E-value=0.014 Score=65.42 Aligned_cols=40 Identities=28% Similarity=0.397 Sum_probs=35.5
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++|+++++|++|..+++++.|+. +|+++.||.||+|+..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 789999999999999888888876 7778999999999863
No 224
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.63 E-value=0.018 Score=64.45 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 4689999999999999999999999999999987654
No 225
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.60 E-value=0.0011 Score=75.41 Aligned_cols=37 Identities=30% Similarity=0.421 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHh-CCCeEEEEcCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLEGRSR 196 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E~~~~ 196 (752)
...+|+||||||.+|+..|..|++ .|++|+|||+.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 347999999999999999999998 6899999999643
No 226
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.58 E-value=0.017 Score=65.12 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=34.8
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++|+++++|++|..+++++.|.. +++++.||.||+|+..
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCC
Confidence 789999999999998877787765 6778999999999863
No 227
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.57 E-value=0.012 Score=65.64 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=35.0
Q ss_pred CCcEEcCceEEEEEecCCcEEEEECCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIAGDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~~g~~~~AD~VV~AvPl 407 (752)
|++|+++++|++|..+++.+.|..+++++.||.||+|+..
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEETTEEEEESEEEECSCE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECCCC
Confidence 7899999999999987777777777889999999999864
No 228
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.52 E-value=0.0015 Score=74.00 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=34.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+||+|||+|++|+++|+.|++.|.+|+|+|+..+.+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35799999999999999999999999999999987655
No 229
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.50 E-value=0.001 Score=76.04 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=33.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+||||||.+|+++|..|++ |.+|+|||+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 45899999999999999999999 99999999976543
No 230
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.45 E-value=0.012 Score=65.83 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=34.7
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++|+++++|++|...+++++|.. +|+++.||.||+|+..
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 789999999999998777887654 7889999999999863
No 231
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.40 E-value=0.015 Score=65.66 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 568999999999999999999999999999997754
No 232
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.34 E-value=0.019 Score=63.98 Aligned_cols=36 Identities=25% Similarity=0.448 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 468999999999999999999999999999998754
No 233
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.29 E-value=0.018 Score=64.95 Aligned_cols=40 Identities=15% Similarity=0.281 Sum_probs=34.4
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++|++++.|++|...++.+.|+. +|+++.||.||+|+..
T Consensus 240 GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 240 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 789999999999988777777765 7889999999999864
No 234
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.27 E-value=0.017 Score=65.63 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=32.8
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.+|+|||||.+|+-.|..|.+.|.+|+++|+.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 79999999999999999999999999999997754
No 235
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.26 E-value=0.0022 Score=73.91 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=33.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~~ 196 (752)
..+|+||||||.||+++|..|++.| .+|+||||.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4689999999999999999999998 79999999764
No 236
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.20 E-value=0.036 Score=62.26 Aligned_cols=36 Identities=33% Similarity=0.445 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 578999999999999999999999999999987754
No 237
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.13 E-value=0.0033 Score=71.23 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=34.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
...+|++|||+|.+|+++|..|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3468999999999999999999999999999999764
No 238
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.13 E-value=0.024 Score=64.79 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 458999999999999999999999999999997643
No 239
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.13 E-value=0.021 Score=64.28 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhC---CCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF---GFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~---g~~v~v~E~~~~~ 197 (752)
..+|+|||||..|+-.|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 46899999999999999999999 9999999987653
No 240
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.10 E-value=0.019 Score=64.56 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhC---CCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF---GFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~---g~~v~v~E~~~~~ 197 (752)
..+|+|||||..|+-.|..|.+. |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 46999999999999999999999 9999999998754
No 241
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.01 E-value=0.0035 Score=72.19 Aligned_cols=35 Identities=37% Similarity=0.540 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC-CCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF-GFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~-g~~v~v~E~~~ 195 (752)
..+|+||||||.||+++|..|++. |.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999974 89999999976
No 242
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.91 E-value=0.036 Score=61.93 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++|+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 468999999999999999999999999999997643
No 243
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.89 E-value=0.0037 Score=71.81 Aligned_cols=36 Identities=33% Similarity=0.397 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHh-CCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~ 197 (752)
.+|+||||||.+|+++|..|++ .|.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4799999999999999999998 79999999997755
No 244
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.88 E-value=0.0046 Score=71.43 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=33.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHh-CCCeEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMS-FGFKVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~ 197 (752)
..+|++|||||.+|+++|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46899999999999999999999 79999999997644
No 245
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.84 E-value=0.0053 Score=70.23 Aligned_cols=38 Identities=32% Similarity=0.366 Sum_probs=34.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC-CCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF-GFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~G 198 (752)
..+||+|||||++|+++|+.|++. |.+|+|+|+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 358999999999999999999998 89999999987543
No 246
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.62 E-value=0.053 Score=61.77 Aligned_cols=39 Identities=15% Similarity=0.030 Sum_probs=35.1
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCC
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVP 406 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvP 406 (752)
|+.+++++.|.++...++++.|.. +++++.+|.|++|+.
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 789999999999999999998876 777899999999984
No 247
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.055 Score=60.21 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++|+.++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 56899999999999999999999999999999764
No 248
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.24 E-value=0.015 Score=60.77 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 468999999999999999999999999999997754
No 249
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.16 E-value=0.02 Score=53.71 Aligned_cols=40 Identities=28% Similarity=0.394 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 156 MPEEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 156 ~~~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.|......+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3444556799999999999999999999999999999865
No 250
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.01 E-value=0.018 Score=62.74 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=34.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999998765
No 251
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.50 E-value=0.029 Score=62.45 Aligned_cols=37 Identities=30% Similarity=0.458 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 207 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL 207 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 4689999999999999999999999999999988654
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.48 E-value=0.044 Score=50.36 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=32.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+.+|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999976
No 253
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.44 E-value=0.037 Score=50.10 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|||+|..|...|..|.+.|++|++++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999854
No 254
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.34 E-value=0.036 Score=57.69 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 35789999999999999999999999999999754
No 255
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.17 E-value=0.04 Score=61.18 Aligned_cols=37 Identities=30% Similarity=0.558 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 206 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 4799999999999999999999999999999987653
No 256
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.12 E-value=0.041 Score=59.40 Aligned_cols=36 Identities=31% Similarity=0.498 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.+|+|||||.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 179 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL 179 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec
Confidence 589999999999999999999999999999988654
No 257
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.04 E-value=0.05 Score=49.83 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|+|+|-.|...|..|.+.|++|+++|.++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 258
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.02 E-value=0.058 Score=50.25 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 35689999999999999999999999999999963
No 259
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.89 E-value=0.054 Score=59.26 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=34.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||||.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 181 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM 181 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 5689999999999999999999999999999988654
No 260
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.61 E-value=0.057 Score=47.24 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~ 195 (752)
.++|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999864
No 261
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.59 E-value=0.054 Score=60.25 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=32.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||.|.+|+++|..|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35799999999999999999999999999999865
No 262
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.26 E-value=0.06 Score=60.28 Aligned_cols=38 Identities=32% Similarity=0.525 Sum_probs=34.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..++|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 222 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG 222 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh
Confidence 35689999999999999999999999999999987654
No 263
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.25 E-value=0.088 Score=58.02 Aligned_cols=37 Identities=22% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999987654
No 264
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.23 E-value=0.055 Score=59.94 Aligned_cols=37 Identities=30% Similarity=0.559 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|.|||.|.+|+++|..|.+.|++|+++|.+...-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 4689999999999999999999999999999987654
No 265
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.19 E-value=0.077 Score=59.54 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||||.+|+-+|..|++.|.+|+|+|+.+++-
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 230 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL 230 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh
Confidence 5689999999999999999999999999999987653
No 266
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.12 E-value=0.084 Score=50.66 Aligned_cols=36 Identities=28% Similarity=0.346 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhC-CCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSF-GFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~-g~~v~v~E~~~ 195 (752)
..+.+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3456899999999999999999999 99999999865
No 267
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.06 E-value=0.07 Score=59.71 Aligned_cols=37 Identities=24% Similarity=0.428 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l 221 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM 221 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 5689999999999999999999999999999987643
No 268
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.98 E-value=0.088 Score=58.52 Aligned_cols=37 Identities=32% Similarity=0.458 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+++.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 207 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 4699999999999999999999999999999987643
No 269
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.93 E-value=0.1 Score=57.79 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+|||+|.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 184 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL 184 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 4699999999999999999999999999999988654
No 270
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.89 E-value=0.082 Score=47.94 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999998754
No 271
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.89 E-value=0.09 Score=55.97 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.++|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 468999999999999999999999999999997643
No 272
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.76 E-value=0.11 Score=54.02 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++++.+++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 479999999999999999999999999999987643
No 273
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.48 E-value=0.096 Score=57.90 Aligned_cols=37 Identities=22% Similarity=0.406 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 4589999999999999999999999999999987654
No 274
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.41 E-value=0.079 Score=58.95 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 213 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV 213 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 4689999999999999999999999999999987653
No 275
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.31 E-value=0.11 Score=54.90 Aligned_cols=34 Identities=38% Similarity=0.564 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|||||..|..-|..++.+|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4589999999999999999999999999999754
No 276
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.29 E-value=0.12 Score=53.59 Aligned_cols=36 Identities=28% Similarity=0.316 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 468999999999999999999999999999987653
No 277
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.28 E-value=0.13 Score=53.23 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999998754
No 278
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.95 E-value=0.14 Score=53.72 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 568999999999999999999999999999987643
No 279
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.88 E-value=0.14 Score=56.91 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=33.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..++|+|||+|.+|+-.|..|++.|.+|+++++++++
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3578999999999999999999999999999987754
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.77 E-value=0.15 Score=53.71 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 578999999999999999999999999999987643
No 281
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.73 E-value=0.15 Score=52.96 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++++.+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 468999999999999999999999999999987643
No 282
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.69 E-value=0.17 Score=52.79 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|++.|++|++++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999754
No 283
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.68 E-value=0.13 Score=58.54 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=33.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 467999999999999999999999999999999875
No 284
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.64 E-value=0.17 Score=55.14 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35799999999999999999999999999999865
No 285
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.64 E-value=0.15 Score=50.93 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|+|||||-.|...|..|.+.|.+|+|++...
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 356899999999999999999999999999997643
No 286
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.60 E-value=0.16 Score=53.11 Aligned_cols=36 Identities=25% Similarity=0.383 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 468999999999999999999999999999987643
No 287
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.51 E-value=0.17 Score=56.41 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-.|..|++.|.+|+++++.+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 4789999999999999999999999999999977543
No 288
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.49 E-value=0.14 Score=50.74 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 289
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.46 E-value=0.19 Score=55.80 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-.|..|++.|.+|+++|+.+++.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 4689999999999999999999999999999987653
No 290
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.35 E-value=0.16 Score=53.68 Aligned_cols=34 Identities=38% Similarity=0.564 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|.|||+|..|.+.|..|++.|++|++++.++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 291
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.25 E-value=0.12 Score=53.33 Aligned_cols=35 Identities=23% Similarity=0.486 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+.++|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46799999999999999999999999999998643
No 292
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.23 E-value=0.16 Score=53.33 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++++.+++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 578999999999999999999999999999987643
No 293
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.11 E-value=0.19 Score=52.45 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=33.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
...+|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 3578999999999999999999999999999987653
No 294
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.06 E-value=0.15 Score=58.15 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=33.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++|+|||+|.+|+-.|..|++.|.+|+|+++.++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 457999999999999999999999999999999875
No 295
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.89 E-value=0.18 Score=55.62 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=33.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCe-EEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFK-VVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~-v~v~E~~~~~ 197 (752)
..++|+|||+|.+|+=.|..|++.|.+ |+|+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 357899999999999999999999999 9999997643
No 296
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.87 E-value=0.17 Score=54.64 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999999999999999864
No 297
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.80 E-value=0.16 Score=57.88 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=33.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 467999999999999999999999999999999875
No 298
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.72 E-value=0.2 Score=52.23 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 46899999999999999999999999999998764
No 299
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.72 E-value=0.21 Score=52.82 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHH-HHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLA-AAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~-aA~~L~~~g~~v~v~E~~~~ 196 (752)
.++|.|||.|.+|++ +|..|.+.|++|++.|.++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999996 78999999999999998753
No 300
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.70 E-value=0.26 Score=48.58 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998765
No 301
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.69 E-value=0.22 Score=52.53 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|++.|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 302
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.67 E-value=0.15 Score=56.31 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=33.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~~~ 197 (752)
..++|+|||||.+|+-+|..|++. |.+|+++++++.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 357999999999999999999999 8999999998753
No 303
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.67 E-value=0.24 Score=52.04 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=32.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345799999999999999999999999999998865
No 304
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.61 E-value=0.23 Score=51.88 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=30.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|..|..-|..|+ +|++|+++++++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4679999999999999999999 999999999854
No 305
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.60 E-value=0.24 Score=50.83 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999998865
No 306
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.46 E-value=0.24 Score=51.57 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3589999999999999999999999999998753
No 307
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.44 E-value=0.23 Score=52.73 Aligned_cols=33 Identities=30% Similarity=0.281 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
.++|.|||+|..|.+.|..|++.|++|+++.+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999874
No 308
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.44 E-value=0.67 Score=54.55 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=32.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..-.+|.|||||..|-..|+.++..|++|+++|.++
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 345799999999999999999999999999999865
No 309
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.40 E-value=0.28 Score=56.23 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4689999999999999999999999999999987654
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.06 E-value=0.23 Score=52.08 Aligned_cols=33 Identities=36% Similarity=0.336 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999864
No 311
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.02 E-value=0.31 Score=54.12 Aligned_cols=36 Identities=25% Similarity=0.317 Sum_probs=33.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
.-++|.|||+|..|...|..|+++|++|+++|.++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998764
No 312
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=89.99 E-value=0.24 Score=52.57 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-.|..|.+.|.+|+++++.+++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 568999999999999999999999999999987654
No 313
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.97 E-value=0.29 Score=54.45 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=32.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~ 197 (752)
..++|+|||||.+|+-+|..+.+.|. +|++++++++.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 46799999999999999999999998 59999887643
No 314
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.76 E-value=0.29 Score=54.73 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36799999999999999999999999999999754
No 315
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.65 E-value=0.24 Score=55.95 Aligned_cols=36 Identities=28% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.++|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 578999999999999999999999999999987643
No 316
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.58 E-value=0.31 Score=51.82 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998753
No 317
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.50 E-value=0.34 Score=49.88 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 468999999999999999999999999999987654
No 318
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.44 E-value=0.31 Score=53.18 Aligned_cols=35 Identities=37% Similarity=0.549 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|.+|+.+|..|...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35799999999999999999999999999998864
No 319
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.39 E-value=0.34 Score=50.06 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=33.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+++.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 4689999999999999999999999999999987543
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.32 E-value=0.28 Score=56.37 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 458999999999999999999999999999975
No 321
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.32 E-value=0.36 Score=53.93 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=33.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC-CC-eEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF-GF-KVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~-g~-~v~v~E~~~~ 196 (752)
..++|.|||+|..|+..|..|++. |+ +|++++.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998764
No 322
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.13 E-value=0.34 Score=53.97 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|..|...|..|++.|++|++++.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45689999999999999999999999999999865
No 323
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.04 E-value=0.38 Score=52.16 Aligned_cols=35 Identities=29% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|.+|+.+|..+...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999764
No 324
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.82 E-value=0.18 Score=46.30 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999998764
No 325
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.79 E-value=0.37 Score=49.76 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999998865
No 326
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.78 E-value=0.39 Score=50.39 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
.++|+|||+|-.|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999864
No 327
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.73 E-value=0.4 Score=48.40 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=31.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456899999999999999999999999999998754
No 328
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.70 E-value=0.4 Score=49.98 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998754
No 329
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.63 E-value=0.38 Score=50.65 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=29.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||+|..|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3578999999999999999999999999999 654
No 330
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.58 E-value=0.39 Score=51.29 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
+++|+|||||..|..+|+.+++.|++|++++.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 36899999999999999999999999999998664
No 331
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.54 E-value=0.34 Score=52.30 Aligned_cols=36 Identities=33% Similarity=0.564 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
....+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 346799999999999999999999998 999999863
No 332
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.50 E-value=0.45 Score=50.36 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
++..+|+|||+|-.|.+.|+.|+..|+ +|+++|...
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 556799999999999999999999998 999999865
No 333
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.50 E-value=0.38 Score=53.37 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=31.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999865
No 334
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.41 E-value=0.46 Score=50.37 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..+|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999999 999999864
No 335
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.30 E-value=0.4 Score=52.75 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=31.2
Q ss_pred CCCCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 158 EEANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 158 ~~~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+....++|.|||+|..|+..|..|++ |++|++++.+.
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 33456799999999999999999998 99999999864
No 336
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.26 E-value=0.51 Score=49.69 Aligned_cols=34 Identities=35% Similarity=0.458 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
.++|.|||.|..|.+.|..|.+.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999999999 899998754
No 337
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.24 E-value=0.44 Score=53.26 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+|+|||||.+|+-.|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 357999999999999999999999999999975
No 338
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.15 E-value=0.47 Score=50.01 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45799999999999999999999999999998764
No 339
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.11 E-value=0.45 Score=49.43 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF 189 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC
Confidence 578999999999999999999999999999987754
No 340
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.11 E-value=0.43 Score=49.57 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998754
No 341
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.08 E-value=0.45 Score=51.06 Aligned_cols=34 Identities=35% Similarity=0.313 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5689999999999999999999999999998753
No 342
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.07 E-value=0.45 Score=53.70 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+|+|||||.+|+-.|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 357999999999999999999999999999974
No 343
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.06 E-value=0.43 Score=53.41 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|++.|++|++++.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999765
No 344
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.05 E-value=0.45 Score=51.09 Aligned_cols=34 Identities=32% Similarity=0.584 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999998764
No 345
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.00 E-value=0.39 Score=51.76 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=31.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
....+|+|+|||.+|..+|..|...|. +|+|++++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 346799999999999999999999998 79999986
No 346
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.97 E-value=0.51 Score=50.05 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
.++|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999865
No 347
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.92 E-value=0.43 Score=50.22 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
.++|+|||+|..|.+.|..|++.|+ +|++++.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999864
No 348
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.85 E-value=0.42 Score=48.75 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=32.0
Q ss_pred CcEEEecccccCcCCcchHHHHHHHHHHHHHHHHHhhc
Q 004458 565 SRLFFAGEATTRQYPATMHGAYLSGLREASRILRATRV 602 (752)
Q Consensus 565 ~~L~fAGe~ts~~~~g~veGAl~SG~rAA~~Il~~l~~ 602 (752)
++||.+||.+.. +...+.|+..|..||..|.+.+..
T Consensus 258 ~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 258 RGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp TTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 789999998874 778999999999999999998854
No 349
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.79 E-value=0.41 Score=49.78 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||.|..|...|..|++.|++|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998866
No 350
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=87.74 E-value=0.43 Score=53.00 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHH--------------------hCCC-eEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLM--------------------SFGF-KVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~--------------------~~g~-~v~v~E~~~~~ 197 (752)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++++.+
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 3579999999999999999999 5787 79999987643
No 351
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.62 E-value=0.5 Score=49.99 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|.|||+|..|.+.|..|++.|++|+++.++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3579999999999999999999999999999874
No 352
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.59 E-value=0.49 Score=52.17 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
....+|+|||.|-.||..|..|++.|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 456799999999999999999999999999998765
No 353
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.58 E-value=0.55 Score=48.24 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
.++|+|+|+|-.|.++|+.|.+.|.+|+|+.++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999999999999999875
No 354
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.49 E-value=0.56 Score=51.92 Aligned_cols=35 Identities=26% Similarity=0.567 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++.|||.|..|+..|..|++.|++|++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999998763
No 355
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.46 E-value=0.32 Score=50.58 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999998863
No 356
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.35 E-value=0.52 Score=50.73 Aligned_cols=35 Identities=34% Similarity=0.545 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35799999999999999999999999999998754
No 357
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.33 E-value=0.39 Score=49.60 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||.|..|...|..|.+.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999998865
No 358
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.25 E-value=0.53 Score=49.27 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
++|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999864
No 359
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.22 E-value=0.48 Score=52.27 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999998754
No 360
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.19 E-value=0.28 Score=54.64 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=46.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCCCCceEEecCCCCceEEEeccceeEcCCCccHHHHHHHHcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPGGRVYTQKMGKKGEFAAVDLGGSVITGIHANPLGVLARQLSIP 240 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GGr~~T~~~~g~g~~~~~d~Ga~~i~~~~~n~l~~L~~~LGl~ 240 (752)
..++|+|+|+|-.|.+.|..|.+.|++|+|+|.+... +... .-+++..++.|-..+ ...+++.|++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~---~~~~---------~~~~~~~~i~Gd~~~--~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDR---LREL---------QDKYDLRVVNGHASH--PDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHH---HHHH---------HHHSSCEEEESCTTC--HHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH---HHHH---------HHhcCcEEEEEcCCC--HHHHHhcCCC
Confidence 3578999999999999999999999999999997531 1110 012344555554332 2456788886
Q ss_pred c
Q 004458 241 L 241 (752)
Q Consensus 241 ~ 241 (752)
.
T Consensus 68 ~ 68 (461)
T 4g65_A 68 D 68 (461)
T ss_dssp T
T ss_pred c
Confidence 3
No 361
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.08 E-value=0.53 Score=46.48 Aligned_cols=35 Identities=34% Similarity=0.382 Sum_probs=30.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998754
No 362
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.06 E-value=0.55 Score=49.12 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=30.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+++|+|||+|..|.+.|..|+ .|++|+++.+++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999998864
No 363
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.98 E-value=0.58 Score=50.23 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=31.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45799999999999999999999999999998764
No 364
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.89 E-value=0.62 Score=51.90 Aligned_cols=33 Identities=33% Similarity=0.600 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..+|+|||||.+|+-.|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 458999999999999999999999999999874
No 365
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.84 E-value=0.33 Score=48.16 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=30.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEE-EcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVV-LEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v-~E~~~ 195 (752)
..++|.|||+|..|.+.|..|.+.|++|++ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 457899999999999999999999999988 66643
No 366
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.81 E-value=0.61 Score=49.10 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=31.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
+..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35689999999999999999999999 99999986
No 367
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.81 E-value=1 Score=52.94 Aligned_cols=35 Identities=29% Similarity=0.418 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|..|...|..|+++|++|++++.+.
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999864
No 368
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.70 E-value=0.48 Score=49.85 Aligned_cols=31 Identities=32% Similarity=0.327 Sum_probs=29.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEG 193 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~ 193 (752)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3799999999999999999999999999987
No 369
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.67 E-value=0.66 Score=47.42 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++++|+|+|+|..|...+.+|.+.|++|+++.++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 35689999999999999999999999999998764
No 370
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.67 E-value=0.55 Score=51.46 Aligned_cols=34 Identities=38% Similarity=0.488 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+.+|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999876
No 371
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.65 E-value=0.69 Score=47.56 Aligned_cols=34 Identities=35% Similarity=0.403 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|||+|-+|-++|+.|.+.|.+|+|+.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5799999999999999999999999999998765
No 372
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.63 E-value=0.72 Score=48.69 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..+|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999998 999999764
No 373
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.54 E-value=0.62 Score=50.37 Aligned_cols=35 Identities=34% Similarity=0.508 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46799999999999999999999999999998754
No 374
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.28 E-value=0.53 Score=52.30 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
+.++|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4679999999999999999999999999999874
No 375
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.13 E-value=0.85 Score=47.63 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||.|..|...|..|.+.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999998754
No 376
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.13 E-value=0.65 Score=46.01 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=31.6
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+.++|+|+|| |..|...|.+|.+.|++|+++.++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 45789999998 9999999999999999999998764
No 377
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.85 E-value=0.64 Score=48.64 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=30.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|.+|+-+|..|++.| +|++++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3579999999999999999999998 799998863
No 378
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.68 E-value=0.74 Score=47.99 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
.++|+|||+|-+|.++|+.|.+.|. +|+|+.++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 999998763
No 379
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.63 E-value=0.7 Score=45.08 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=29.0
Q ss_pred cEEEEC-CChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 164 SVIIVG-AGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 164 ~v~ViG-aG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
+|+||| +|..|...|..|.+.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999874
No 380
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.44 E-value=0.77 Score=47.80 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999999999999999999999764
No 381
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.39 E-value=0.88 Score=48.03 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
++..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345799999999999999999999988 999999865
No 382
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.35 E-value=0.85 Score=47.65 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998754
No 383
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.29 E-value=0.59 Score=48.04 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|||+|-+|.++|+.|.+.|.+|+|+.++.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999998763
No 384
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.29 E-value=0.64 Score=48.77 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=30.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
..++|.|||.|..|...|..|.+.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35789999999999999999999999 99999985
No 385
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.28 E-value=0.82 Score=47.94 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~ 195 (752)
++|+|||+|-.|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 78999999865
No 386
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.25 E-value=0.7 Score=46.86 Aligned_cols=34 Identities=35% Similarity=0.498 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..+|+|||+|-.|..+|.+|++.|. +++|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999853
No 387
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=85.17 E-value=0.52 Score=51.00 Aligned_cols=41 Identities=27% Similarity=0.491 Sum_probs=35.7
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHhCCC---eEEEEcCCC-CCCCCc
Q 004458 161 NEGSVIIVGA-GLAGLAAAKQLMSFGF---KVVVLEGRS-RPGGRV 201 (752)
Q Consensus 161 ~~~~v~ViGa-G~aGl~aA~~L~~~g~---~v~v~E~~~-~~GGr~ 201 (752)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 4679999999 9999999999999998 999999865 457763
No 388
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.14 E-value=0.63 Score=50.75 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=29.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999998854
No 389
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.04 E-value=0.83 Score=47.42 Aligned_cols=35 Identities=29% Similarity=0.483 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46799999999999999999999999999999864
No 390
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.86 E-value=0.86 Score=46.60 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.7
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999997643
No 391
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=84.62 E-value=0.53 Score=50.06 Aligned_cols=35 Identities=29% Similarity=0.182 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC-------CeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG-------FKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g-------~~v~v~E~~~~ 196 (752)
.++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 468999999999999999999999 89999998653
No 392
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.60 E-value=0.74 Score=51.47 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=31.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+.+++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 557899999999999999999999999999998863
No 393
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.57 E-value=0.75 Score=54.24 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=32.9
Q ss_pred CCcEEEEC--CChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVG--AGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViG--aG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
.++|+||| ||.+|+-+|..|++.|.+|+|+++.+ +.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~ 565 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA 565 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc
Confidence 46899999 99999999999999999999999977 54
No 394
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=84.53 E-value=0.48 Score=57.79 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 3689999999999999999999999999999987653
No 395
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.43 E-value=0.96 Score=47.42 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
++|+|||||-.|.+.|+.|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999754
No 396
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=84.42 E-value=0.76 Score=46.46 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC----CeEEEEcCCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG----FKVVVLEGRSR 196 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g----~~v~v~E~~~~ 196 (752)
.++|.|||+|..|.+.|..|.+.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 468999999999999999999999 79999988653
No 397
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.30 E-value=0.75 Score=48.39 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~ 195 (752)
.++|.|||.|..|.+.|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999998864
No 398
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.28 E-value=0.87 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=31.0
Q ss_pred CCcEEEEC-CChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVG-AGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViG-aG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45899999 99999999999999999999998754
No 399
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.27 E-value=0.79 Score=46.36 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=29.8
Q ss_pred CcEEEECCChhHHHHHHHHHhCC-CeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG-FKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g-~~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|.+.| ++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 37999999999999999999999 9999998753
No 400
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.05 E-value=1.1 Score=42.97 Aligned_cols=33 Identities=36% Similarity=0.545 Sum_probs=30.6
Q ss_pred CcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|+|| |..|...+.+|.+.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999998764
No 401
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.04 E-value=0.88 Score=46.90 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 164 SVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 164 ~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998754
No 402
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.99 E-value=0.58 Score=50.06 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 164 SVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 164 ~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998753
No 403
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=83.87 E-value=0.41 Score=48.07 Aligned_cols=33 Identities=30% Similarity=0.279 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
.++|.|||+|..|.+-|..|.+.|++|+++.+.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 468999999999999999999999999999874
No 404
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=83.78 E-value=0.82 Score=48.14 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
++|+|||+|-.|.+.|..|++.|+ +|++++.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999999 999999863
No 405
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.77 E-value=0.76 Score=47.26 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|||+|..|-+.|+.|.+.|++|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998763
No 406
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=83.76 E-value=0.88 Score=50.41 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=31.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC--------------------CC-eEEEEcCCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF--------------------GF-KVVVLEGRSRP 197 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~--------------------g~-~v~v~E~~~~~ 197 (752)
...+|+|||+|.+|+-+|..|++. |. +|+|+++++.+
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 357899999999999999999974 54 89999987643
No 407
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.74 E-value=0.97 Score=46.70 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998753
No 408
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.70 E-value=0.83 Score=51.07 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~ 195 (752)
.++|.|||+|..|+..|..|++. |++|++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 79999998754
No 409
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.64 E-value=0.97 Score=46.67 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998753
No 410
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.59 E-value=1.1 Score=50.01 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+.|+|+|+|..|.++|..|+..|.+|++.|.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46799999999999999999999999999998754
No 411
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.54 E-value=0.7 Score=48.06 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=29.2
Q ss_pred CcEEEECCChhHHHHHHHHHhC-----C-CeEEEEcC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSF-----G-FKVVVLEG 193 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~-----g-~~v~v~E~ 193 (752)
++|.|||+|..|.+.|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999976
No 412
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.50 E-value=1 Score=50.37 Aligned_cols=35 Identities=14% Similarity=0.344 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999875
No 413
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.42 E-value=1.1 Score=45.85 Aligned_cols=33 Identities=36% Similarity=0.492 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899888653
No 414
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.30 E-value=1.1 Score=48.03 Aligned_cols=34 Identities=29% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|+|+|+|-.|..+|..|.+.|.+|++.+..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999999864
No 415
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.26 E-value=1.1 Score=46.16 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC---eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF---KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~---~v~v~E~~~ 195 (752)
.++|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999998 899998765
No 416
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=83.25 E-value=1.1 Score=43.36 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=29.8
Q ss_pred CcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|+|| |..|...+.+|.+.|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 37999996 9999999999999999999998754
No 417
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=83.10 E-value=0.79 Score=53.87 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.-++|.|||+|..|...|..|++.|++|++++.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 35689999999999999999999999999999864
No 418
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.02 E-value=0.79 Score=47.34 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
.++|+|||+|-+|.++|+.|.+.|+ +|+|+.++.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5689999999999999999999998 899998764
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.01 E-value=0.95 Score=46.10 Aligned_cols=34 Identities=15% Similarity=0.395 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+++|+|+|||..|...+.+|.+.|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998764
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.98 E-value=1.1 Score=46.07 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=30.7
Q ss_pred CCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+ |..|.+.|..|.+.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999 9999999999999999999998743
No 421
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=82.94 E-value=0.99 Score=47.49 Aligned_cols=36 Identities=28% Similarity=0.288 Sum_probs=30.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCC----CeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFG----FKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g----~~v~v~E~~~ 195 (752)
++.++|.|||+|..|.+.|..|.+.| ++|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34568999999999999999999999 7999998754
No 422
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=82.93 E-value=1.2 Score=47.44 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|.|||.|..|-+.|..|.+.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999998764
No 423
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=82.92 E-value=0.84 Score=51.70 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 35799999999999999999999999999999865
No 424
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.87 E-value=1 Score=55.29 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..+|+|||||.+|+-+|..|.+.|. +|+|+++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999996 899999876
No 425
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.87 E-value=1.2 Score=46.84 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
+.+|+|||+|-.|.+.|+.|+..|. +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999997 899999754
No 426
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=82.80 E-value=1.3 Score=45.53 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..++|+|+|+|-+|.++|+.|.+.|. +|+|+.++.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46799999999999999999999996 899997753
No 427
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.75 E-value=0.97 Score=46.30 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=29.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998754
No 428
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.59 E-value=0.97 Score=47.27 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCC--CeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG--FKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g--~~v~v~E~~~ 195 (752)
++|+|||+|-.|.+.|..|++.| .+|++++.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7999999854
No 429
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.54 E-value=1.2 Score=46.73 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
..++|+|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45799999999999999999999998 89999886
No 430
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=82.53 E-value=1.2 Score=46.04 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..++|+|||+|-+|-++|+.|.+.|. +|+|+.+..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35799999999999999999999998 899997754
No 431
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.51 E-value=1.2 Score=47.20 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999987 899999753
No 432
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=82.47 E-value=1.2 Score=46.97 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCCCcEEEECCC-hhHHHHHHHHHhCCCeEEEEcCC
Q 004458 160 ANEGSVIIVGAG-LAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 160 ~~~~~v~ViGaG-~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
-..++|+|||+| +.|..+|..|...|..|+|++++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 346799999999 67999999999999999988653
No 433
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.44 E-value=1.4 Score=45.70 Aligned_cols=35 Identities=37% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..++|+|+|+|-+|-++|+.|++.|. +|+|+.++.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35799999999999999999999998 699997753
No 434
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.44 E-value=0.53 Score=46.90 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|+|+|+|-.|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999875
No 435
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=82.42 E-value=1.4 Score=46.05 Aligned_cols=38 Identities=16% Similarity=0.380 Sum_probs=33.0
Q ss_pred CCCCCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 158 EEANEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 158 ~~~~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.....++|+|.|| |..|...|.+|.+.|++|+++.++.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3355678999998 9999999999999999999998753
No 436
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=82.39 E-value=1 Score=50.16 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~~ 195 (752)
.++|.|||+|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999999 89999998754
No 437
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=82.38 E-value=1.1 Score=49.05 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46799999999999999999999999999999764
No 438
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=82.27 E-value=0.98 Score=47.04 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=28.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|.+||-|..|...|..|.+.|++|++++++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999998765
No 439
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.18 E-value=0.87 Score=46.90 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|...|..|.+.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 440
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=82.12 E-value=0.86 Score=48.99 Aligned_cols=34 Identities=18% Similarity=0.041 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHhCC-------CeEEEEcCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG-------FKVVVLEGRSR 196 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g-------~~v~v~E~~~~ 196 (752)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999988653
No 441
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.05 E-value=1.2 Score=46.71 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
..+|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999998 999999876
No 442
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=81.97 E-value=1.2 Score=49.85 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999998864
No 443
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=81.90 E-value=1.1 Score=46.28 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=29.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
.++|+|+|+|-.|.++|+.|++.| +|+|+.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 468999999999999999999999 99999775
No 444
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=81.89 E-value=1.3 Score=46.92 Aligned_cols=34 Identities=32% Similarity=0.291 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 4689999999999999999999999999988754
No 445
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=81.85 E-value=1.4 Score=45.18 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.3
Q ss_pred CcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|.|| |..|-..+.+|.+.|++|+++-+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999998 9999999999999999999997754
No 446
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.82 E-value=1.3 Score=43.06 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=29.8
Q ss_pred CcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|+|+|| |..|...+.+|.+.|++|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 36999998 9999999999999999999997753
No 447
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=81.71 E-value=1.3 Score=46.97 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
...+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45799999999999999999999997 899999754
No 448
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=81.42 E-value=1.1 Score=50.32 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCCcEEEECCChhHHH-HHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLA-AAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~-aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3578999999999997 6999999999999999754
No 449
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.39 E-value=1.3 Score=44.73 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+++|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3589999999999999999999999999988753
No 450
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=81.33 E-value=1.1 Score=52.34 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=33.7
Q ss_pred CCcEEEEC--CChhHHHHHHHHHhCCCeEEEEcCCCCCC
Q 004458 162 EGSVIIVG--AGLAGLAAAKQLMSFGFKVVVLEGRSRPG 198 (752)
Q Consensus 162 ~~~v~ViG--aG~aGl~aA~~L~~~g~~v~v~E~~~~~G 198 (752)
..+|+||| +|.+|+-+|..|++.|.+|+++++.+.+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 46799999 99999999999999999999999987655
No 451
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.32 E-value=1.3 Score=46.71 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=30.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~ 194 (752)
...+|+|||+|..|.+.|+.|+..|. +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45799999999999999999999887 89999974
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=81.24 E-value=1.5 Score=44.11 Aligned_cols=33 Identities=12% Similarity=0.304 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC----eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF----KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~----~v~v~E~~~ 195 (752)
++|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 589999999999999999999998 999998754
No 453
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=81.22 E-value=1.4 Score=44.80 Aligned_cols=34 Identities=32% Similarity=0.476 Sum_probs=30.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
.. +|+|||+|-+|-++++.|.+.|. +|+|+.++.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35 89999999999999999999998 899998764
No 454
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=81.21 E-value=1.8 Score=40.67 Aligned_cols=38 Identities=16% Similarity=0.078 Sum_probs=33.0
Q ss_pred CCcEEcCceEEEEEecCCcEEEEE-CCEEEEecEEEEcCCh
Q 004458 368 GVPIFYEKTVNTIKYGNEGVEVIA-GDQMFQADMVLCTVPL 407 (752)
Q Consensus 368 gl~I~ln~~V~~I~~~~~gv~V~~-~g~~~~AD~VV~AvPl 407 (752)
|++++++ +|++|+.+++++.|+. ++ ++.||.||+|+..
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 7899999 9999998888888876 55 8999999999853
No 455
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.18 E-value=1.4 Score=45.48 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
..++|+|||+|-+|-+.|+.|.+.|+ +|+|+.++.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 45789999999999999999999996 999997753
No 456
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=81.15 E-value=1.2 Score=46.61 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=30.7
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 160 ANEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 160 ~~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
.+.++|+|.|| |..|...+.+|.+.|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 45688999999 99999999999999999999988653
No 457
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=81.09 E-value=1.2 Score=45.08 Aligned_cols=30 Identities=30% Similarity=0.264 Sum_probs=27.7
Q ss_pred cEEEECCChhHHHHHHHHHhCCCeEEEEcC
Q 004458 164 SVIIVGAGLAGLAAAKQLMSFGFKVVVLEG 193 (752)
Q Consensus 164 ~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~ 193 (752)
+|.|||+|..|.+.|..|.+.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 799999999999999999999999998654
No 458
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.08 E-value=1.2 Score=46.33 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
++|+|||+|..|.+.|+.|+..|+ +|++++...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999754
No 459
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=81.06 E-value=1.5 Score=49.12 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...+|+|||+|..|..+|..|...|.+|+++|.++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999999999999999999999999999754
No 460
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.95 E-value=1.3 Score=49.36 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998754
No 461
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.78 E-value=1.3 Score=46.55 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
++|+|||+|..|.+.|+.|+..|. +++++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999887 899999865
No 462
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=80.60 E-value=1.7 Score=45.95 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 346789999999999999999999999999998754
No 463
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.48 E-value=1.5 Score=48.94 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999998753
No 464
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=80.44 E-value=1.8 Score=45.89 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=31.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
....+|+|||+|-.|.+.|+.|+..|. +++++|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 456799999999999999999999987 899999753
No 465
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=80.40 E-value=0.98 Score=49.04 Aligned_cols=30 Identities=27% Similarity=0.248 Sum_probs=28.2
Q ss_pred CcEEEECCChhHHHHHHHHHh-CCCeEEEEc
Q 004458 163 GSVIIVGAGLAGLAAAKQLMS-FGFKVVVLE 192 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~-~g~~v~v~E 192 (752)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 599999998
No 466
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.30 E-value=1.6 Score=44.35 Aligned_cols=32 Identities=34% Similarity=0.430 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 164 SVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 164 ~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
+|+|||+|-.|.+.|+.|.+.|++|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998864
No 467
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.11 E-value=1.4 Score=48.07 Aligned_cols=35 Identities=34% Similarity=0.520 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~~ 195 (752)
...+|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46789999999999999999999998 899998764
No 468
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=80.07 E-value=1.7 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
..++|+|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35799999999999999999999998 89999886
No 469
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=79.91 E-value=1.8 Score=46.15 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=30.6
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhCCC--eEEEEcCC
Q 004458 160 ANEGSVIIVGA-GLAGLAAAKQLMSFGF--KVVVLEGR 194 (752)
Q Consensus 160 ~~~~~v~ViGa-G~aGl~aA~~L~~~g~--~v~v~E~~ 194 (752)
+...+|+|||+ |-.|.++|+.|...|. +|+++|..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 34679999998 9999999999999985 89999874
No 470
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.70 E-value=1.5 Score=45.02 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=29.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhC--CCeEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSF--GFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~--g~~v~v~E~~ 194 (752)
+.++|.|||+|..|.+.|..|.+. |++|++++++
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 356899999999999999999988 5788888764
No 471
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.55 E-value=1.5 Score=48.98 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998753
No 472
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=79.40 E-value=1.2 Score=49.92 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhCC--------------CeEEEEcCCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFG--------------FKVVVLEGRSRPG 198 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g--------------~~v~v~E~~~~~G 198 (752)
.+|+|||||++|+-.|..|++.+ .+|+|+|+.+++-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 57999999999999999887543 6899999988654
No 473
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=79.32 E-value=1.8 Score=45.19 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|.+||=|..|...|..|.++|++|++++++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998754
No 474
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=79.16 E-value=1.5 Score=44.49 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=29.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCe-EEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFK-VVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~-v~v~E~~ 194 (752)
.++|.|||+|..|...|..|.+.|++ |.+++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 35899999999999999999999998 8888764
No 475
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.87 E-value=2.4 Score=41.30 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=30.0
Q ss_pred CcEEEECC-ChhHHHHHHHHH-hCCCeEEEEcCCCC
Q 004458 163 GSVIIVGA-GLAGLAAAKQLM-SFGFKVVVLEGRSR 196 (752)
Q Consensus 163 ~~v~ViGa-G~aGl~aA~~L~-~~g~~v~v~E~~~~ 196 (752)
+.|+|+|| |-.|...|.+|. +.|++|+++.++..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 45999995 999999999999 89999999988653
No 476
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=78.87 E-value=1.9 Score=44.24 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
.++|+|||+|-+|-++|+.|.+.|. +|+|+-+.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3589999999999999999999997 79999875
No 477
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.85 E-value=2 Score=47.07 Aligned_cols=35 Identities=31% Similarity=0.399 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 46799999999999999999999999999999854
No 478
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=78.83 E-value=1.9 Score=44.34 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCCcEEEEC-CChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVG-AGLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViG-aG~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|+|+| +|-.|.++|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 356899999 9999999999999999999999775
No 479
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=78.83 E-value=1.8 Score=45.50 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=30.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~ 194 (752)
...+|+|||+|-.|.+.|+.|+..|. +++++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999999884 89999864
No 480
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=78.55 E-value=2 Score=44.22 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=32.1
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
++++|+|+|| |..|...+.+|.+.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999999 99999999999999999999988654
No 481
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=78.49 E-value=2 Score=46.20 Aligned_cols=36 Identities=25% Similarity=0.412 Sum_probs=32.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
..++|.|||+|..|...|..+.+.|++|++++....
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 457999999999999999999999999999987543
No 482
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.29 E-value=1.8 Score=47.52 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..+.-|||.|..|+..|..|++.|++|++++.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999875
No 483
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=78.24 E-value=2.2 Score=44.47 Aligned_cols=34 Identities=32% Similarity=0.435 Sum_probs=31.1
Q ss_pred CCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|.|| |..|...|.+|.+.|++|+++.++.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 468999998 9999999999999999999998765
No 484
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=78.23 E-value=2.1 Score=43.30 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=30.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
..+|+|||+|-.|..+|.+|+..|+ +++|++..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5699999999999999999999997 78888874
No 485
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.22 E-value=1.9 Score=45.34 Aligned_cols=34 Identities=26% Similarity=0.599 Sum_probs=29.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCC--eEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGF--KVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~--~v~v~E~~~ 195 (752)
..+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998875 799998753
No 486
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=78.15 E-value=2.4 Score=43.45 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=30.2
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAG-LAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG-~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|+|||+| +.|..+|..|.+.|..|+++.++
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35799999976 79999999999999999999763
No 487
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=78.12 E-value=2.3 Score=44.15 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=30.3
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|+|||+ |+.|..+|..|.+.|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4679999996 568999999999999999999874
No 488
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=78.10 E-value=1.8 Score=45.65 Aligned_cols=36 Identities=33% Similarity=0.562 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 456789999999999999999999999999998754
No 489
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.06 E-value=1.9 Score=42.14 Aligned_cols=34 Identities=24% Similarity=0.505 Sum_probs=31.0
Q ss_pred CCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|+|| |..|...+.+|.+.|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999998864
No 490
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=77.93 E-value=2.2 Score=45.25 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSR 196 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 196 (752)
...++|.|||.|-.|...|..|...|++|+++++...
T Consensus 162 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 4467899999999999999999999999999987653
No 491
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=77.79 E-value=1.8 Score=47.81 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 162 EGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 162 ~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.++|+|+|+|-.|...|..|++.|++|+++.++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 4689999999999999999999999999998753
No 492
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=77.72 E-value=2.2 Score=45.17 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
...++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 456789999999999999999999999999998754
No 493
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=77.43 E-value=1.9 Score=47.27 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
..++|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 46799999999999999999999999999998754
No 494
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=77.42 E-value=2.6 Score=43.81 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=30.6
Q ss_pred CCCcEEEECCC-hhHHHHHHHHHhCCCeEEEEcCC
Q 004458 161 NEGSVIIVGAG-LAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG-~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
..++|+|||+| +.|..+|..|...|..|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 46799999999 68999999999999999999644
No 495
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=77.27 E-value=2.8 Score=43.54 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=31.6
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhCCCeEEEEcCC
Q 004458 160 ANEGSVIIVGA-GLAGLAAAKQLMSFGFKVVVLEGR 194 (752)
Q Consensus 160 ~~~~~v~ViGa-G~aGl~aA~~L~~~g~~v~v~E~~ 194 (752)
.+.++|+|.|| |..|...+.+|.+.|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678999998 999999999999999999998775
No 496
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.15 E-value=2.4 Score=44.91 Aligned_cols=34 Identities=24% Similarity=0.583 Sum_probs=30.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
...+|+|||+|-.|-.+|.+|+..|+ +++|++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46799999999999999999999997 68888874
No 497
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.97 E-value=1.8 Score=44.93 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=30.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhCCC-eEEEEcCC
Q 004458 161 NEGSVIIVGAGLAGLAAAKQLMSFGF-KVVVLEGR 194 (752)
Q Consensus 161 ~~~~v~ViGaG~aGl~aA~~L~~~g~-~v~v~E~~ 194 (752)
...+|+|||+|-.|..+|.+|++.|+ +++|+|..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46799999999999999999999997 78888864
No 498
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.57 E-value=3 Score=41.97 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-C-hhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGA-G-LAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGa-G-~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+.+.|+|.|| | -.|...|.+|++.|++|+++.++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 35678999999 7 499999999999999999997753
No 499
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=76.56 E-value=2.2 Score=43.02 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=31.1
Q ss_pred CCCCcEEEECC---ChhHHHHHHHHHhCCCeEEEEcCCC
Q 004458 160 ANEGSVIIVGA---GLAGLAAAKQLMSFGFKVVVLEGRS 195 (752)
Q Consensus 160 ~~~~~v~ViGa---G~aGl~aA~~L~~~g~~v~v~E~~~ 195 (752)
.+.+.|+|.|| |-.|...|.+|++.|++|+++.++.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 56789999996 4789999999999999999997753
No 500
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.53 E-value=2.1 Score=48.69 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=32.9
Q ss_pred CcEEEECCChhHHHHHHHHHhCCCeEEEEcCCCCC
Q 004458 163 GSVIIVGAGLAGLAAAKQLMSFGFKVVVLEGRSRP 197 (752)
Q Consensus 163 ~~v~ViGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 197 (752)
.+|+|||+|-.|...|..|.+.|++|+++|.++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 78999999999999999999999999999998753
Done!