Query 004462
Match_columns 752
No_of_seqs 247 out of 768
Neff 4.5
Searched_HMMs 46136
Date Thu Mar 28 23:48:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004462.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004462hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 3E-234 7E-239 1973.4 64.9 735 15-752 16-852 (852)
2 PLN00150 potassium ion transpo 100.0 2E-218 4E-223 1843.7 61.5 678 55-752 9-779 (779)
3 PLN00148 potassium transporter 100.0 3E-214 6E-219 1810.6 59.6 675 69-752 1-785 (785)
4 PLN00149 potassium transporter 100.0 9E-214 2E-218 1808.1 61.1 674 69-752 1-779 (779)
5 TIGR00794 kup potassium uptake 100.0 2E-196 5E-201 1655.1 55.6 600 95-752 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 5E-181 1E-185 1510.8 48.7 525 94-752 11-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 4E-169 9E-174 1385.1 46.6 527 91-752 14-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 6E-166 1E-170 1378.7 40.9 448 96-582 1-534 (534)
9 PF06570 DUF1129: Protein of u 68.6 20 0.00042 36.9 7.8 21 457-477 179-199 (206)
10 PF14362 DUF4407: Domain of un 64.4 63 0.0014 34.9 11.0 51 399-449 15-69 (301)
11 TIGR00911 2A0308 L-type amino 63.5 39 0.00084 38.8 9.8 21 338-358 335-355 (501)
12 PRK10655 potE putrescine trans 60.6 1.3E+02 0.0029 33.7 13.1 33 343-381 295-327 (438)
13 COG0531 PotE Amino acid transp 56.5 2.1E+02 0.0046 31.7 13.7 85 274-358 230-324 (466)
14 PF05297 Herpes_LMP1: Herpesvi 55.6 3.9 8.4E-05 44.8 0.0 62 419-483 124-190 (381)
15 TIGR00908 2A0305 ethanolamine 53.2 1.2E+02 0.0027 34.0 11.3 22 338-359 294-315 (442)
16 PRK10435 cadB lysine/cadaverin 52.0 2.2E+02 0.0047 32.2 13.1 66 343-414 293-363 (435)
17 PRK15049 L-asparagine permease 51.3 2.7E+02 0.0058 32.4 13.9 22 338-359 321-342 (499)
18 TIGR03810 arg_ornith_anti argi 51.1 2.9E+02 0.0062 31.6 13.9 44 316-359 274-317 (468)
19 KOG3643 GABA receptor [Signal 50.3 15 0.00033 42.3 3.6 91 352-446 225-325 (459)
20 TIGR00930 2a30 K-Cl cotranspor 47.4 6.6E+02 0.014 32.2 17.3 61 337-400 403-463 (953)
21 COG4059 MtrE Tetrahydromethano 45.7 21 0.00045 38.0 3.5 31 453-483 257-287 (304)
22 PF07331 TctB: Tripartite tric 44.7 2.7E+02 0.0059 26.2 13.6 40 402-441 85-126 (141)
23 TIGR00907 2A0304 amino acid pe 42.1 2.7E+02 0.0058 31.8 11.9 26 458-483 454-479 (482)
24 TIGR03428 ureacarb_perm permea 40.8 6.1E+02 0.013 29.0 15.1 35 330-364 307-344 (475)
25 TIGR03813 put_Glu_GABA_T putat 40.1 2.9E+02 0.0063 31.5 11.8 19 458-476 434-452 (474)
26 TIGR00909 2A0306 amino acid tr 39.4 1.8E+02 0.0039 32.4 9.8 83 318-405 276-358 (429)
27 PRK11387 S-methylmethionine tr 37.9 4.5E+02 0.0097 30.0 12.9 12 348-359 317-328 (471)
28 PRK11049 D-alanine/D-serine/gl 34.5 4.2E+02 0.0092 30.3 12.0 96 262-358 226-332 (469)
29 TIGR00905 2A0302 transporter, 30.8 6.6E+02 0.014 28.7 12.8 43 317-359 279-321 (473)
30 PRK11492 hyfE hydrogenase 4 me 30.2 6.2E+02 0.013 26.8 11.4 145 338-498 57-213 (216)
31 PRK10746 putative transport pr 29.8 9E+02 0.019 27.7 14.7 27 458-484 427-453 (461)
32 PF13520 AA_permease_2: Amino 27.9 5.9E+02 0.013 28.1 11.4 146 262-413 203-365 (426)
33 PF05313 Pox_P21: Poxvirus P21 27.6 1.3E+02 0.0028 31.3 5.7 61 280-351 88-149 (189)
34 PRK13108 prolipoprotein diacyl 27.1 2.1E+02 0.0045 33.6 7.9 31 450-482 92-122 (460)
35 PRK11357 frlA putative fructos 27.1 4.2E+02 0.009 29.9 10.2 51 345-400 305-355 (445)
36 PF02660 G3P_acyltransf: Glyce 22.6 6.4E+02 0.014 25.6 9.6 84 389-482 90-175 (178)
37 KOG4742 Predicted chitinase [G 22.3 34 0.00074 37.6 0.5 35 269-309 171-207 (286)
38 TIGR00906 2A0303 cationic amin 22.3 1.2E+03 0.026 27.7 13.1 62 339-406 329-394 (557)
39 PRK05151 electron transport co 21.7 2.1E+02 0.0046 29.9 6.0 44 381-424 18-63 (193)
40 PF12811 BaxI_1: Bax inhibitor 21.5 4.5E+02 0.0098 29.0 8.7 61 408-471 148-221 (274)
41 PF05545 FixQ: Cbb3-type cytoc 20.9 95 0.0021 25.0 2.7 28 467-494 20-47 (49)
42 TIGR01940 nqrE NADH:ubiquinone 20.7 2.5E+02 0.0054 29.6 6.3 44 381-424 17-62 (200)
43 TIGR02454 CbiQ_TIGR cobalt ABC 20.1 3.9E+02 0.0084 26.6 7.5 45 457-501 80-124 (198)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=3e-234 Score=1973.43 Aligned_cols=735 Identities=69% Similarity=1.113 Sum_probs=654.4
Q ss_pred hcccCCCCCCccccccccccCCCCCCCCccccccccC---------CCCccccccccC-CccCcCchhhhhhccccCCCC
Q 004462 15 LTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGARE---------GFGSMRRRLVKK-PKYDSLDVEAMEIAGAFGDHS 84 (752)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~r~dsl~~ea~~~~~~~~~~~ 84 (752)
.+.+++++|+||||||++|||+|+++ ++++|+++++ ++++.++|+||+ ||+||||+||++++++++||.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~e~~~~~~~~~~~~ 94 (852)
T PLN00151 16 SGGLVGTDSGESRWVDGSEDDSEDPA-SLDDDDDDRDSGGGMLEEEEDGNMRRRLIRTPPRVDSFDVEAMEIPGAHRHDS 94 (852)
T ss_pred cCCcccCCCCCcccccCccccccCCc-ccccccccccccCCccccccccchhhhHhhCCCccchhhhccccccccccccc
Confidence 55566677999999999999998877 5555555444 667889999999 999999999999999988787
Q ss_pred CcchHHHHHHHHHhhcceeecccCcchHHHHHHhhcCCCCCCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCchH
Q 004462 85 KDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGT 164 (752)
Q Consensus 85 ~~~~~~~~l~La~qalGVVyGDIGTSPLYv~~s~F~~~~~~~~~dilGvLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGt 164 (752)
++.++|+++.|||||||||||||||||||||+++|.+.++++++||+|+||||||||||||++|||+|||||||||||||
T Consensus 95 ~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGt 174 (852)
T PLN00151 95 EDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGT 174 (852)
T ss_pred ccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHHHHHHHHHhheeEEEEecCCCCchH
Confidence 88888899999999999999999999999999999753457999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcCccccCcee
Q 004462 165 FALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAIS 244 (752)
Q Consensus 165 fALySLi~r~~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~am~igDGvlTPAIS 244 (752)
||||||+|||+|++++||||++|+++|+|+++.|+++++|+.|+|++||+|+++|.+|++++++|+||+|||||||||||
T Consensus 175 fALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAIS 254 (852)
T PLN00151 175 FALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMS 254 (852)
T ss_pred HHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccccccCccc---------------------------------------------------------------
Q 004462 245 VMSAVSGLQGEIHGFGE--------------------------------------------------------------- 261 (752)
Q Consensus 245 VLSAVeGL~v~~p~l~~--------------------------------------------------------------- 261 (752)
|||||||||+++|++++
T Consensus 255 VLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y 334 (852)
T PLN00151 255 VMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVY 334 (852)
T ss_pred hhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHH
Confidence 99999999999999965
Q ss_pred ------------------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCcccCccccccc
Q 004462 262 ------------------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVP 317 (752)
Q Consensus 262 ------------------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP 317 (752)
|+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|
T Consensus 335 ~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP 414 (852)
T PLN00151 335 IYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVP 414 (852)
T ss_pred HHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchh
Q 004462 318 DSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTD 397 (752)
Q Consensus 318 ~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~ 397 (752)
+|++||+|++||+||||||||||||+|||++||++||||||+||+|||++++||||||+|||+||++|++||++||+|++
T Consensus 415 ~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~ 494 (852)
T PLN00151 415 SSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITD 494 (852)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHH
Q 004462 398 IANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNY 477 (752)
Q Consensus 398 l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~ 477 (752)
|||||||||++||++||+|+++||+++||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|||
T Consensus 495 l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~y 574 (852)
T PLN00151 495 IGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNY 574 (852)
T ss_pred HHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCc
Q 004462 478 GSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEE 557 (752)
Q Consensus 478 G~~~~~~~~~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~e 557 (752)
|++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||||||++|+|+||++|
T Consensus 575 G~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~e 654 (852)
T PLN00151 575 GSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEE 654 (852)
T ss_pred HHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhh
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-ccCCCCCCCCC
Q 004462 558 RFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVS-VASRDPEASGS 636 (752)
Q Consensus 558 R~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 636 (752)
||+++|+++++|++|||++||||||..++++++||++|+++|++|||.|+.+..++++.....+++.+ ........++
T Consensus 655 R~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 733 (852)
T PLN00151 655 RFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPN- 733 (852)
T ss_pred eEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCC-
Confidence 99999999999999999999999999873489999999999999999998632222111000000000 0000000010
Q ss_pred CCccccccccccccccccCC-CCCccccCCCCC---CcccccCCCCchHHhHHHHHHhHhcCcEEEEeeceEEecCCcch
Q 004462 637 YGTEELKIPLMHERRFDESG-TSASEETTSALP---SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFF 712 (752)
Q Consensus 637 ~s~~s~~~~~~~~~~~~~~~-~~~s~~~~~~~~---~~~~~~~~~~~~~~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~ 712 (752)
++..+.+.|.++......++ ..+..++....+ +.++ .+.++++++|+++|++|+|+||+|++||++|+||++|++
T Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~ 812 (852)
T PLN00151 734 GSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMS-SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWF 812 (852)
T ss_pred cccccccccccccccccccccccccccccccccccccccc-cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcH
Confidence 01111111111111000000 000111000000 1122 133568899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccccccccccCCCCEEEeeeEEEC
Q 004462 713 LKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 713 ~Kki~in~~y~fLrkN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
+||+++||+|+|||||||++.+.|+|||+|+|||||+|+|
T Consensus 813 ~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 813 IKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.9e-218 Score=1843.71 Aligned_cols=678 Identities=48% Similarity=0.869 Sum_probs=610.9
Q ss_pred ccccccccC-CccCc-CchhhhhhccccCCCCCcchHHHHHHHHHhhcceeecccCcchHHHHHHhhcCCCCCCccceeh
Q 004462 55 SMRRRLVKK-PKYDS-LDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLG 132 (752)
Q Consensus 55 ~~~~~~~~~-~r~ds-l~~ea~~~~~~~~~~~~~~~~~~~l~La~qalGVVyGDIGTSPLYv~~s~F~~~~~~~~~dilG 132 (752)
++|+|+||+ ||+|+ ||+||+++.|+++ .++.+|+.++.|||||||||||||||||||||+++|.+++.+++|||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilG 86 (779)
T PLN00150 9 SNQGRLWDLDQRITRPLGVDADSVRSMYF--SSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIG 86 (779)
T ss_pred CCccchhhCCCCCCCccCcchhhcccccc--cccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHh
Confidence 568999999 99999 9999999999965 6789999999999999999999999999999999997644689999999
Q ss_pred hHHHHHHHHHHHhhheeeEEEEEecCCCCchHHHHHHhhhhhcccccCCCCCCccchhhccccCCCChhhhHHHHHHHHH
Q 004462 133 ALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDIL 212 (752)
Q Consensus 133 vLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGtfALySLi~r~~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~l 212 (752)
+||||||||||||++|||+|||||||||||||||||||+|||+|++++|||++.|+++++|+++ +..|..++|++|
T Consensus 87 vLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~l 162 (779)
T PLN00150 87 ALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD----NMNRKTRIQRKL 162 (779)
T ss_pred HHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc----cchhhhHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999863 334556799999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhcCccccCceeeeeccccccccccCccc-------------------------------
Q 004462 213 ERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGE------------------------------- 261 (752)
Q Consensus 213 e~s~~~~~~ll~l~llG~am~igDGvlTPAISVLSAVeGL~v~~p~l~~------------------------------- 261 (752)
|+|+.+|.+++++|++|+||+||||+||||||||||||||++..|++++
T Consensus 163 E~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgP 242 (779)
T PLN00150 163 ENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAP 242 (779)
T ss_pred hcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhcc
Confidence 9999999999999999999999999999999999999999999999965
Q ss_pred --------------------------------------------------------chhhhhhccCCCCcchhhhhHHHH
Q 004462 262 --------------------------------------------------------RAEAMFADLGHFSVKAIQIAFTLV 285 (752)
Q Consensus 262 --------------------------------------------------------GaEALyADlGHFg~~~Iqlaw~~~ 285 (752)
|+|||||||||||++|||+||+++
T Consensus 243 Im~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~ 322 (779)
T PLN00150 243 IFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSL 322 (779)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhh
Confidence 999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecC
Q 004462 286 VFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTS 365 (752)
Q Consensus 286 V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS 365 (752)
|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||
T Consensus 323 V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS 402 (779)
T PLN00150 323 VYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTS 402 (779)
T ss_pred HHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Q 004462 366 RKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELL 445 (752)
Q Consensus 366 ~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~ 445 (752)
++++||||||+|||+||++|+++|++||+|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++
T Consensus 403 ~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~ 482 (779)
T PLN00150 403 NKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGI 482 (779)
T ss_pred cccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhH
Q 004462 446 YMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSI 525 (752)
Q Consensus 446 f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~ 525 (752)
|||||+.||+||||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++
T Consensus 483 f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~ 562 (779)
T PLN00150 483 YFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPL 562 (779)
T ss_pred HHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred HHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHH
Q 004462 526 FGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRK 605 (752)
Q Consensus 526 f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~ 605 (752)
|.||++|||++||++||||||++|+|+||++|||+++++++++|++|||++||||||..++ ++|||++|+++|++|||+
T Consensus 563 f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d-~~dFE~~LvesL~~FIr~ 641 (779)
T PLN00150 563 FSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKK-DDNFEQLLIASLERFIEI 641 (779)
T ss_pred HHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCccc-chHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhhccc-cccccccccCCCCCCCCCC-CccccccccccccccccCCCCCccccCCCCC-Cccccc-CCCCchH
Q 004462 606 EAQDLALERNLLE-SDLDSVSVASRDPEASGSY-GTEELKIPLMHERRFDESGTSASEETTSALP-SSVMAL-DEDPSLE 681 (752)
Q Consensus 606 e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~-s~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~-~~~~~~~ 681 (752)
|+.+...+++ +. ++.+.++... .+++. ...+...+..... .++.+ ....+ +.+.+. +.+++++
T Consensus 642 e~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~v~ 708 (779)
T PLN00150 642 ESFREQSDLE-SMAASWTPEELMG----EGNSVGSGLFTQYDQSDIN-------FATSQ-EWKRPSSQEDSVSGHSSDTQ 708 (779)
T ss_pred hhhccccccc-ccccccccccccc----cCCcccccccccccccccc-------ccccc-ccccccccccccccccccHH
Confidence 9853211111 11 0000000000 00000 0000000000000 00000 00001 011111 2346889
Q ss_pred HhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEeeeEEEC
Q 004462 682 YELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 682 ~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~fLrkN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
+|+++|++|+|+||+|++||++|+||++|+++||+++|++|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 709 eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 709 DEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.7e-214 Score=1810.57 Aligned_cols=675 Identities=46% Similarity=0.833 Sum_probs=591.5
Q ss_pred CchhhhhhccccCCCCCcchHHH---HHHHHHhhcceeecccCcchHHHHHHhhcC-C-CCCCccceehhHHHHHHHHHH
Q 004462 69 LDVEAMEIAGAFGDHSKDVSVWH---TLALAFQTLGVVYGDMGTSPLYVYSDVFSK-V-QIETEIDVLGALSLVMYTITL 143 (752)
Q Consensus 69 l~~ea~~~~~~~~~~~~~~~~~~---~l~La~qalGVVyGDIGTSPLYv~~s~F~~-~-~~~~~~dilGvLSLIfWtL~L 143 (752)
||.|++-.+.+++ ++.+|+. ++.|||||||||||||||||||||+++|.+ + ..++++||+|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~---~~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtL 77 (785)
T PLN00148 1 MEAESGVSPSRNP---SQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTL 77 (785)
T ss_pred CCcccCCCCCCCC---CcchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHH
Confidence 5667766544432 4457766 899999999999999999999999999964 2 237999999999999999999
Q ss_pred HhhheeeEEEEEecCCCCchHHHHHHhhhhhcccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHH
Q 004462 144 IPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLL 223 (752)
Q Consensus 144 iv~iKYv~iVLrAdn~GEGGtfALySLi~r~~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll 223 (752)
||++|||+|||||||||||||||||||+|||+|++++||||++|+++++|+.+.++.+ +++.++|++||+|+++|.+++
T Consensus 78 iv~iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll 156 (785)
T PLN00148 78 IPLLKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALL 156 (785)
T ss_pred HHHHhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988655544 556789999999999999999
Q ss_pred HHHHHHHHHhhcCccccCceeeeeccccccccccCccc------------------------------------------
Q 004462 224 LLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGE------------------------------------------ 261 (752)
Q Consensus 224 ~l~llG~am~igDGvlTPAISVLSAVeGL~v~~p~l~~------------------------------------------ 261 (752)
++|++|+||+||||||||||||||||||||+++|++++
T Consensus 157 ~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~ 236 (785)
T PLN00148 157 LVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGS 236 (785)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999965
Q ss_pred ---------------------------------------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhh
Q 004462 262 ---------------------------------------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 296 (752)
Q Consensus 262 ---------------------------------------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~G 296 (752)
|+|||||||||||++|||+||+++|||||+|||+|
T Consensus 237 iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~G 316 (785)
T PLN00148 237 IGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMG 316 (785)
T ss_pred HHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcc
Confidence 99999999999999999999999999999999999
Q ss_pred hhhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeech
Q 004462 297 QAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPV 376 (752)
Q Consensus 297 QgA~Ll~~p~~~~npFy~siP~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~ 376 (752)
|||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+
T Consensus 317 QaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~ 396 (785)
T PLN00148 317 QAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPE 396 (785)
T ss_pred hHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhheeEEeCCchhhhhhhhcchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 004462 377 INWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAE 456 (752)
Q Consensus 377 VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~ 456 (752)
|||+||++|++||++||+|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+|
T Consensus 397 vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~ 476 (785)
T PLN00148 397 INWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQ 476 (785)
T ss_pred HHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCcc
Q 004462 457 GGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAI 536 (752)
Q Consensus 457 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~~~~l 536 (752)
|||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++
T Consensus 477 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~l 556 (785)
T PLN00148 477 GGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAF 556 (785)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999998888888889999999999999999999999999999999
Q ss_pred ceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004462 537 HSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNL 616 (752)
Q Consensus 537 H~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l~~~~ 616 (752)
||++||||||++|+|+||++|||+++|+++++||+|||++||||||..++ ++|||++|+++|++|||.|+.+...+ ..
T Consensus 557 He~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~-~~dFe~~Lv~~L~~FIr~e~~~~~~~-~~ 634 (785)
T PLN00148 557 HKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRD-DGDFENMLVQSIAEFIQMEAEEPQSS-AS 634 (785)
T ss_pred cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCccccc-chHHHHHHHHHHHHHHHhhhhccccc-cc
Confidence 99999999999999999999999999999999999999999999999877 89999999999999999998521000 00
Q ss_pred ccccccc-ccccCCCCCCCCCCCcccccccc---ccccccccC---CCCCccc----cCCC-CC--Cccccc----CCCC
Q 004462 617 LESDLDS-VSVASRDPEASGSYGTEELKIPL---MHERRFDES---GTSASEE----TTSA-LP--SSVMAL----DEDP 678 (752)
Q Consensus 617 ~~~~~~~-~~~~~~~~~~~~~~s~~s~~~~~---~~~~~~~~~---~~~~s~~----~~~~-~~--~~~~~~----~~~~ 678 (752)
+..+.++ .+..+.. ...+.+. +...|. ..+.....+ ...+.++ .++. .+ +.++.. +.++
T Consensus 635 ~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (785)
T PLN00148 635 ESSSNDGRMAVISTR--DVQSSSL-LMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDP 711 (785)
T ss_pred ccccccccccccccc--ccccccc-cccccccccccccccccccccccccccccccccccccccccceeecccccccccc
Confidence 0000000 0000000 0000000 000000 000000000 0000000 0000 01 122211 1246
Q ss_pred chHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEeeeEEEC
Q 004462 679 SLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 679 ~~~~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~fLrkN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
++++|+++|++|+|+||+|++||++|+||++|+++||+++|++|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 712 ~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 712 SVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred hHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=8.6e-214 Score=1808.11 Aligned_cols=674 Identities=48% Similarity=0.806 Sum_probs=589.3
Q ss_pred CchhhhhhccccCCCCCcchHHHHHHHHHhhcceeecccCcchHHHHHHhhcCC--CCCCccceehhHHHHHHHHHHHhh
Q 004462 69 LDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKV--QIETEIDVLGALSLVMYTITLIPL 146 (752)
Q Consensus 69 l~~ea~~~~~~~~~~~~~~~~~~~l~La~qalGVVyGDIGTSPLYv~~s~F~~~--~~~~~~dilGvLSLIfWtL~Liv~ 146 (752)
||.|.+.. .||.++.+|+.++.|||||||||||||||||||||+++|.++ ..++++||+|+||||||||||||+
T Consensus 1 ~~~~~~~~----~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~ 76 (779)
T PLN00149 1 MDLEGGSP----QNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPL 76 (779)
T ss_pred CCcccCcc----ccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHh
Confidence 34554443 335567899999999999999999999999999999999542 337999999999999999999999
Q ss_pred heeeEEEEEecCCCCchHHHHHHhhhhhcccccCCCCCCccchhhccccCCCCh---hhhHHHHHHHHHhhhhhhhHHHH
Q 004462 147 AKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTP---ELERALQLKDILERTSSLKTLLL 223 (752)
Q Consensus 147 iKYv~iVLrAdn~GEGGtfALySLi~r~~~~~~ip~~~~~d~~~s~~~~~~~~~---~~~~~~~~k~~le~s~~~~~~ll 223 (752)
+|||+|||||||||||||||||||+|||+|++++||||++|+++++|+++.|+. +.+++.++|++||+|+.+|.+++
T Consensus 77 iKYv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll 156 (779)
T PLN00149 77 LKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLL 156 (779)
T ss_pred hhhEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998877553 34567889999999999999999
Q ss_pred HHHHHHHHHhhcCccccCceeeeeccccccccccC-ccc-----------------------------------------
Q 004462 224 LLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG-FGE----------------------------------------- 261 (752)
Q Consensus 224 ~l~llG~am~igDGvlTPAISVLSAVeGL~v~~p~-l~~----------------------------------------- 261 (752)
++|++|+||+|||||||||||||||||||++..|. +++
T Consensus 157 ~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~ 236 (779)
T PLN00149 157 VLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCIS 236 (779)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999965 443
Q ss_pred ----------------------------------------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhh
Q 004462 262 ----------------------------------------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYM 295 (752)
Q Consensus 262 ----------------------------------------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~ 295 (752)
|+|||||||||||++|||+||+++|||||+|||+
T Consensus 237 ~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~ 316 (779)
T PLN00149 237 AIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYM 316 (779)
T ss_pred HHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhh
Confidence 9999999999999999999999999999999999
Q ss_pred hhhhhhccCCC---cccCcccccccCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCce
Q 004462 296 GQAAYLMKYPD---SANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQI 372 (752)
Q Consensus 296 GQgA~Ll~~p~---~~~npFy~siP~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQI 372 (752)
||||||++||+ +++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++|||
T Consensus 317 GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQI 396 (779)
T PLN00149 317 GQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQI 396 (779)
T ss_pred hHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCce
Confidence 99999999996 566699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eechhHHHHHHHhhheeEEeCCchhhhhhhhcchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh
Q 004462 373 YIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLS 452 (752)
Q Consensus 373 YIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~ 452 (752)
|||+|||+||++|++||++||+|++||||||+||++||++||+|+++||+.+|+||++++++|+++|+++|++|||||+.
T Consensus 397 YIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~ 476 (779)
T PLN00149 397 YIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLI 476 (779)
T ss_pred eeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhh
Q 004462 453 KIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLS 532 (752)
Q Consensus 453 K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~ 532 (752)
||+||||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|
T Consensus 477 Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~ 556 (779)
T PLN00149 477 KFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTN 556 (779)
T ss_pred hhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888888888999999999999999999999999999
Q ss_pred cCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHH
Q 004462 533 LPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLAL 612 (752)
Q Consensus 533 ~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l 612 (752)
||++||++||||||++|+|+||++|||+++|++++++|+|||++||||||..++ ++|||++|+++|++|||+|+.+...
T Consensus 557 ~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d-~~dFE~~Lve~L~~FI~~e~~~~~~ 635 (779)
T PLN00149 557 LPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKD-DMEFEKDLVCSIAEFIRSEKPEPNG 635 (779)
T ss_pred CCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeecccccc-chHHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999999999999999999999999999999999999999999887 8999999999999999999752111
Q ss_pred hhhccccccccccccCCCCCCCCCCCcccc---ccccccccccccCCCCCccccCCCC--CCccccc----CCCCchHHh
Q 004462 613 ERNLLESDLDSVSVASRDPEASGSYGTEEL---KIPLMHERRFDESGTSASEETTSAL--PSSVMAL----DEDPSLEYE 683 (752)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~---~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~----~~~~~~~~e 683 (752)
+++... +++.+.... .+... +..+. ..+.........+..++..+..... ++.++.. +.++++++|
T Consensus 636 ~~~~~~---~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eE 710 (779)
T PLN00149 636 APENEE---GEDERMTVV-GTCST-HLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREE 710 (779)
T ss_pred cccccc---ccccccccc-ccccc-cccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHH
Confidence 100000 000000000 00000 00000 0000000000000000000000000 1122211 234678999
Q ss_pred HHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEeeeEEEC
Q 004462 684 LSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 684 ~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~fLrkN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
+++|++|+|+||+|++||++|+||++|+++||+++||+|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 711 l~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 711 LQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2.3e-196 Score=1655.12 Aligned_cols=600 Identities=44% Similarity=0.789 Sum_probs=563.6
Q ss_pred HHHhhcceeecccCcchHHHHHHhhcCCCCCCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCchHHHHHHhhhhh
Q 004462 95 LAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRY 174 (752)
Q Consensus 95 La~qalGVVyGDIGTSPLYv~~s~F~~~~~~~~~dilGvLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGtfALySLi~r~ 174 (752)
|+|||||||||||||||||||+++|.+ +.+++|||+|+||||||||||++++|||+|||||||||||||||||||+||+
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~-~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~ 79 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSG-GFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRY 79 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHh
Confidence 579999999999999999999999965 3579999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcCccccCceeeeeccccccc
Q 004462 175 AKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQG 254 (752)
Q Consensus 175 ~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~am~igDGvlTPAISVLSAVeGL~v 254 (752)
+|++.+||||++|+++++|+.+.++. .+|..++|++||++++.|++++++|++|+||++|||+||||||||||||||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v 158 (688)
T TIGR00794 80 AKISARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEI 158 (688)
T ss_pred ccccCCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccc
Confidence 99999999999999999999887776 56778999999999888999999999999999999999999999999999999
Q ss_pred cccCccc-------------------------------------------------------------------------
Q 004462 255 EIHGFGE------------------------------------------------------------------------- 261 (752)
Q Consensus 255 ~~p~l~~------------------------------------------------------------------------- 261 (752)
+.|++++
T Consensus 159 ~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~ 238 (688)
T TIGR00794 159 VAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGT 238 (688)
T ss_pred cCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCC
Confidence 9999944
Q ss_pred --------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCcccCcccccccCcchHHHHHH
Q 004462 262 --------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 327 (752)
Q Consensus 262 --------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP~~l~wP~~vl 327 (752)
|+|||||||||||++|||+||+++|||||+|||+||||||++||++..||||.++|+|++||++++
T Consensus 239 ~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vl 318 (688)
T TIGR00794 239 VGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFII 318 (688)
T ss_pred ceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcchh
Q 004462 328 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 407 (752)
Q Consensus 328 AtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~ 407 (752)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||+|++||+|||+||+
T Consensus 319 AtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt 398 (688)
T TIGR00794 319 ATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVT 398 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 004462 408 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 487 (752)
Q Consensus 408 ~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~ 487 (752)
+||+|||+|+++||+.+||||++++++|+++|+.+|++||+||+.||+||||+||++|++++++|++|+||++++++++.
T Consensus 399 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~ 478 (688)
T TIGR00794 399 GTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDH 478 (688)
T ss_pred hhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCC-CcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecC
Q 004462 488 REKISMDFLLDLGSTLG-TVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGP 566 (752)
Q Consensus 488 ~~~~s~~~~~~~~~~~~-~~RvpG~alf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~ 566 (752)
++++|++++++.+.+.. .+|+||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++
T Consensus 479 ~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~ 558 (688)
T TIGR00794 479 EHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGP 558 (688)
T ss_pred hcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcC
Confidence 99999999998654433 48999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCCcccccccc
Q 004462 567 KDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPL 646 (752)
Q Consensus 567 ~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~ 646 (752)
++ |+|||++||||||+++. +++|+++++++|++|++++..+. +. + +. + . +
T Consensus 559 ~~-g~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~-~~-~-~~----~------------------~--~- 608 (688)
T TIGR00794 559 TE-GMYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFN-LN-N-LE----E------------------L--S- 608 (688)
T ss_pred CC-CEEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhc-cc-c-cc----c------------------c--c-
Confidence 54 89999999999999999 99999999999999999875311 00 0 00 0 0 0
Q ss_pred ccccccccCCCCCccccCCCCCCcccccCCCCchHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHH
Q 004462 647 MHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLR 726 (752)
Q Consensus 647 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~fLr 726 (752)
+ + + . +...++|++.++++.|+|++|++||++++++++++++||..+|++|+||+
T Consensus 609 --~------~-------~-------~----~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~ 662 (688)
T TIGR00794 609 --D------K-------R-------C----RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIR 662 (688)
T ss_pred --c------c-------c-------c----ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHH
Confidence 0 0 0 0 01257888889999999999999999999999999888855599999999
Q ss_pred HhccccccccccCCCCEEEeeeEEEC
Q 004462 727 RNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 727 kN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
||||++.++|+||+||++||||+|||
T Consensus 663 rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 663 RNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999997
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=5.3e-181 Score=1510.83 Aligned_cols=525 Identities=32% Similarity=0.577 Sum_probs=498.5
Q ss_pred HHHHhhcceeecccCcchHHHHHHhhcC-CCC-CCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCchHHHHHHhh
Q 004462 94 ALAFQTLGVVYGDMGTSPLYVYSDVFSK-VQI-ETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLI 171 (752)
Q Consensus 94 ~La~qalGVVyGDIGTSPLYv~~s~F~~-~~~-~~~~dilGvLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGtfALySLi 171 (752)
.|+++|||||||||||||||||+++|.+ ++. +++|||+|+||||||||||++++|||++||||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 3789999999999999999999999965 333 79999999999999999999999999999999999999999999999
Q ss_pred hhhcccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcCccccCceeeeecccc
Q 004462 172 SRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSG 251 (752)
Q Consensus 172 ~r~~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~am~igDGvlTPAISVLSAVeG 251 (752)
+|+.+ ++.|.+++++|++|+||++|||+|||||||||||||
T Consensus 91 ~~~~~---------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEG 131 (622)
T PRK10745 91 GRNTS---------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEG 131 (622)
T ss_pred hhhcc---------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhc
Confidence 87543 234557889999999999999999999999999999
Q ss_pred ccccccCccc----------------------------------------------------------------------
Q 004462 252 LQGEIHGFGE---------------------------------------------------------------------- 261 (752)
Q Consensus 252 L~v~~p~l~~---------------------------------------------------------------------- 261 (752)
|++.+|++++
T Consensus 132 L~v~~p~l~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~~P~Vl~AlnP~ya~~f~~~~~ 211 (622)
T PRK10745 132 LEIVAPQLDTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIANPEVLHALNPMWAVHFFLEYK 211 (622)
T ss_pred ccccCCCCCCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHhCC
Confidence 9999999987
Q ss_pred ---------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCcccCcccccccCcchHHHHH
Q 004462 262 ---------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFV 326 (752)
Q Consensus 262 ---------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP~~l~wP~~v 326 (752)
|+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||.++|+|++||+++
T Consensus 212 ~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~vi 291 (622)
T PRK10745 212 TVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLI 291 (622)
T ss_pred CceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcch
Q 004462 327 LAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAE 406 (752)
Q Consensus 327 lAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV 406 (752)
+||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||+|++||+|||+||
T Consensus 292 LATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAV 371 (622)
T PRK10745 292 LATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAV 371 (622)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 004462 407 VGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSE 486 (752)
Q Consensus 407 ~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~ 486 (752)
++||+|||+|+++|++.+|+|+++++++|+++|+.+|++||+||+.||+||||+||++|++++++|+||++|++++++++
T Consensus 372 t~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~ 451 (622)
T PRK10745 372 TGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRM 451 (622)
T ss_pred eeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecC
Q 004462 487 VREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGP 566 (752)
Q Consensus 487 ~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~ 566 (752)
.++++|+++|++.+++.++.||||+|+|||+..+++|+++.||++|||++||++||+||+++|+|+||++||++++++++
T Consensus 452 ~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~ 531 (622)
T PRK10745 452 HEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP 531 (622)
T ss_pred HhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC
Confidence 99999999999999877878999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCCcccccccc
Q 004462 567 KDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPL 646 (752)
Q Consensus 567 ~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~ 646 (752)
++|||++||||||+|+. ++ .++ .|+.
T Consensus 532 ---g~~rv~~~yGf~e~~~i-~~---------------------~L~-~~~~---------------------------- 557 (622)
T PRK10745 532 ---TFWRVVASYGWRETPNV-EE---------------------VFH-RCGL---------------------------- 557 (622)
T ss_pred ---CEEEEEEEecCCCCCCH-HH---------------------HHH-HHHh----------------------------
Confidence 79999999999999998 66 333 1111
Q ss_pred ccccccccCCCCCccccCCCCCCcccccCCCCchHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHH
Q 004462 647 MHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLR 726 (752)
Q Consensus 647 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~fLr 726 (752)
++++.|+ ++++|++||++++++++++|.+ |++++|+||.
T Consensus 558 -------------------------------~g~~~~~--------~~~s~fl~r~~l~~~~~~~m~~--wr~~lF~~m~ 596 (622)
T PRK10745 558 -------------------------------EGLSCRM--------METSFFMSHESLILGKRPWYLR--LRGKLFLLLQ 596 (622)
T ss_pred -------------------------------CCCCCCc--------cceEEEEeeEEEEeCCCCCcHH--HHHHHHHHHH
Confidence 1122334 7999999999999999999999 9999999999
Q ss_pred HhccccccccccCCCCEEEeeeEEEC
Q 004462 727 RNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 727 kN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
||+++++++|+||+||++|+|+++||
T Consensus 597 rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 597 RNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 99999999999999999999999996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-169 Score=1385.11 Aligned_cols=527 Identities=36% Similarity=0.623 Sum_probs=506.4
Q ss_pred HHHHHHHhhcceeecccCcchHHHHHHhhcC-CCC-CCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCchHHHHH
Q 004462 91 HTLALAFQTLGVVYGDMGTSPLYVYSDVFSK-VQI-ETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALY 168 (752)
Q Consensus 91 ~~l~La~qalGVVyGDIGTSPLYv~~s~F~~-~~~-~~~~dilGvLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGtfALy 168 (752)
.+..+.++|+|||||||||||||+++++|.. ++. .++++|+|++||||||||+||++|||++||||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 3566889999999999999999999999965 343 68999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcCccccCceeeeec
Q 004462 169 SLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSA 248 (752)
Q Consensus 169 SLi~r~~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~am~igDGvlTPAISVLSA 248 (752)
+|++|.++ +...+++++|++|+|+++|||+||||||||||
T Consensus 94 aL~~~~~~----------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSA 133 (627)
T COG3158 94 ALARRAAP----------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSA 133 (627)
T ss_pred HHHHhhcC----------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHH
Confidence 99998665 34558899999999999999999999999999
Q ss_pred cccccccccCccc-------------------------------------------------------------------
Q 004462 249 VSGLQGEIHGFGE------------------------------------------------------------------- 261 (752)
Q Consensus 249 VeGL~v~~p~l~~------------------------------------------------------------------- 261 (752)
||||++++|.+++
T Consensus 134 vEGL~iv~p~~~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~~p~IL~AiNP~yAi~fl~ 213 (627)
T COG3158 134 VEGLEIVTPALDPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIIDDPEILRAINPYYAVHFLL 213 (627)
T ss_pred hccccccCccccCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhcCHHHHHHhChHHHHHHHH
Confidence 9999999999988
Q ss_pred ------------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCcccCcccccccCcchHH
Q 004462 262 ------------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWP 323 (752)
Q Consensus 262 ------------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP~~l~wP 323 (752)
|+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++||
T Consensus 214 ~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP 293 (627)
T COG3158 214 EEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIP 293 (627)
T ss_pred hCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhh
Q 004462 324 VFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYG 403 (752)
Q Consensus 324 ~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYG 403 (752)
|++|||+||||||||+|||+||++|||++||++||+||.|||+++.||||||.|||+|++++++++++||+|++||+|||
T Consensus 294 ~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYG 373 (627)
T COG3158 294 LVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYG 373 (627)
T ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhHHHHH
Q 004462 404 IAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKY 483 (752)
Q Consensus 404 iAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~ 483 (752)
||||++|+|||+|++++|+..|||+++++.++.++|+++|..||+||+.||.||||+|+++|++++++|+||++|+++.+
T Consensus 374 iAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~ 453 (627)
T COG3158 374 IAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILF 453 (627)
T ss_pred hheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEE
Q 004462 484 RSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRR 563 (752)
Q Consensus 484 ~~~~~~~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~ 563 (752)
++..++.+|++.+++.+++..+.|||||++|+|...+.+|.+++|+++||+++||++||++|++.++|+|+++||+.+++
T Consensus 454 ~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~ 533 (627)
T COG3158 454 EKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQ 533 (627)
T ss_pred HHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCCccccc
Q 004462 564 VGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELK 643 (752)
Q Consensus 564 ~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~ 643 (752)
+++ +++|+.++|||||+|+. ++ ++. .|+.
T Consensus 534 l~~---~f~rV~l~~Gfme~pnv-p~---------------------~l~-~~~~------------------------- 562 (627)
T COG3158 534 LSD---DFVRVVLHFGFMETPNV-PR---------------------ALR-LCRK------------------------- 562 (627)
T ss_pred ccC---ceEEEEEEeeccCCCCH-HH---------------------HHH-HHhh-------------------------
Confidence 998 69999999999999999 77 554 3332
Q ss_pred cccccccccccCCCCCccccCCCCCCcccccCCCCchHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHH
Q 004462 644 IPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYA 723 (752)
Q Consensus 644 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a~~~gVvY~LGr~~V~Ark~S~~~Kki~in~~y~ 723 (752)
+|+..|+ +.++|++||++++++++++|.+ |++.+|.
T Consensus 563 ----------------------------------~G~~f~i--------m~tsFfl~re~l~~~~~~g~~~--w~~~lfi 598 (627)
T COG3158 563 ----------------------------------KGLKFDI--------METSFFLSRESLIASKNSGMPR--WRDRLFI 598 (627)
T ss_pred ----------------------------------cCceecc--------cceEEEEEeeeeecCCCCCchH--HHHHHHH
Confidence 2344566 8999999999999999999999 9999999
Q ss_pred HHHHhccccccccccCCCCEEEeeeEEEC
Q 004462 724 FLRRNCRAGAANMSVPHMNILQVGMTYMV 752 (752)
Q Consensus 724 fLrkN~r~~~~~l~IP~~rlveVG~~yei 752 (752)
.|.||+-+++++|+||++||+|+|.++||
T Consensus 599 ~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 599 ALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 99999999999999999999999999986
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=5.9e-166 Score=1378.72 Aligned_cols=448 Identities=46% Similarity=0.809 Sum_probs=435.3
Q ss_pred HHhhcceeecccCcchHHHHHHhhcC-CCCCCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCchHHHHHHhhhhh
Q 004462 96 AFQTLGVVYGDMGTSPLYVYSDVFSK-VQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRY 174 (752)
Q Consensus 96 a~qalGVVyGDIGTSPLYv~~s~F~~-~~~~~~~dilGvLSLIfWtL~Liv~iKYv~iVLrAdn~GEGGtfALySLi~r~ 174 (752)
|++|||||||||||||||||+++|.+ +..+++|||+|+||||||||+|++++|||++||||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 68999999999999999999999933 24489999999999999999999999999999999999999999999999953
Q ss_pred cccccCCCCCCccchhhccccCCCChhhhHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcCccccCceeeeeccccccc
Q 004462 175 AKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQG 254 (752)
Q Consensus 175 ~~~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~am~igDGvlTPAISVLSAVeGL~v 254 (752)
.+ ++++.|..++++|++|+||++|||+||||||||||||||++
T Consensus 81 ~~-------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v 123 (534)
T PF02705_consen 81 LK-------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEV 123 (534)
T ss_pred hc-------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhc
Confidence 32 34566777899999999999999999999999999999999
Q ss_pred cccCccc-------------------------------------------------------------------------
Q 004462 255 EIHGFGE------------------------------------------------------------------------- 261 (752)
Q Consensus 255 ~~p~l~~------------------------------------------------------------------------- 261 (752)
.+|++++
T Consensus 124 ~~p~~~~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~p~Vl~A~nP~yai~f~~~~~~~~ 203 (534)
T PF02705_consen 124 ATPSLEPYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQHPEVLKALNPYYAIRFFIRNGWIG 203 (534)
T ss_pred cCCCCcceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhCHHHHHHhCHHHHHHHHHHcCCch
Confidence 9999997
Q ss_pred ------------chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCcccCcccccccCcchHHHHHHHH
Q 004462 262 ------------RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAA 329 (752)
Q Consensus 262 ------------GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~siP~~l~wP~~vlAt 329 (752)
|+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||.++|+|++||++++||
T Consensus 204 ~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAt 283 (534)
T PF02705_consen 204 FFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILAT 283 (534)
T ss_pred hhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcchhhH
Q 004462 330 LAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGV 409 (752)
Q Consensus 330 lAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~v 409 (752)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 284 lAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~t 363 (534)
T PF02705_consen 284 LATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGT 363 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc
Q 004462 410 MLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVRE 489 (752)
Q Consensus 410 M~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~ 489 (752)
|++||+|+++||+.+||||++++++|+++|+.+|++||+||+.||+||||+||++|++++++|++|++|++++++++.++
T Consensus 364 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 443 (534)
T PF02705_consen 364 MLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFEREN 443 (534)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCC
Q 004462 490 KISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDY 569 (752)
Q Consensus 490 ~~s~~~~~~~~~~~~~~RvpG~alf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~Ik~~~vP~V~~~eR~~v~~~~~~~~ 569 (752)
++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|+||+++|+|+||++||++++++++ +
T Consensus 444 ~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~ 521 (534)
T PF02705_consen 444 KLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP--D 521 (534)
T ss_pred CCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996 3
Q ss_pred cEEEEEEEEeeec
Q 004462 570 HMFRCVTRYGYKD 582 (752)
Q Consensus 570 ~~~r~v~ryGy~d 582 (752)
++|||++||||||
T Consensus 522 g~~rv~~ryGf~e 534 (534)
T PF02705_consen 522 GFYRVTLRYGFME 534 (534)
T ss_pred CEEEEEEEecCCC
Confidence 8999999999998
No 9
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=68.56 E-value=20 Score=36.91 Aligned_cols=21 Identities=5% Similarity=0.287 Sum_probs=16.7
Q ss_pred CccHHHHHHHHHHHHHHHHHH
Q 004462 457 GGWLPLAFASVFLCVMYIWNY 477 (752)
Q Consensus 457 GGW~pl~ia~v~~~iM~~W~~ 477 (752)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999888766653
No 10
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=64.36 E-value=63 Score=34.88 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=38.1
Q ss_pred hhhhhcchhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH----HHHHHHHH
Q 004462 399 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGS----VELLYMSA 449 (752)
Q Consensus 399 ~~AYGiAV~~vM~iTT~L~~~v~~~vW~~~~~~~~~f~~~F~~----ie~~f~sa 449 (752)
=..||.+|..+.++.++-++..+..+++.++|.+++|.++++. +|-..+|+
T Consensus 15 ~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss 69 (301)
T PF14362_consen 15 YAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS 69 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3468989999999998888888888899887777777666655 45444443
No 11
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=63.51 E-value=39 Score=38.77 Aligned_cols=21 Identities=10% Similarity=0.029 Sum_probs=12.8
Q ss_pred hhhhhhhhHHHHHHHhCCCCc
Q 004462 338 AMISATFSCIKQAMALGCFPR 358 (752)
Q Consensus 338 A~ISg~FSii~Qai~Lg~fPr 358 (752)
+.+.+.=-++...-+-|.+|+
T Consensus 335 ~~~~~~sR~l~a~ardg~lP~ 355 (501)
T TIGR00911 335 GSLFSSSRLFFVGGREGHLPS 355 (501)
T ss_pred HHHHHHHHHHHHHHhcCCccH
Confidence 334444445555557899997
No 12
>PRK10655 potE putrescine transporter; Provisional
Probab=60.64 E-value=1.3e+02 Score=33.68 Aligned_cols=33 Identities=18% Similarity=0.439 Sum_probs=18.4
Q ss_pred hhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHH
Q 004462 343 TFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFL 381 (752)
Q Consensus 343 ~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~L 381 (752)
+=-+...+-+-|.+|+. .-++++ .| .|...-++
T Consensus 295 ~sR~~~~~a~dg~lP~~-~~~v~~--~~---tP~~all~ 327 (438)
T PRK10655 295 IAQVFKSSADEGYFPKI-FSRVTK--VD---APVQGMLI 327 (438)
T ss_pred HHHHHHHHhcCCchhHH-HHhhCc--CC---CCHHHHHH
Confidence 33455666678999974 222232 12 67655544
No 13
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=56.54 E-value=2.1e+02 Score=31.71 Aligned_cols=85 Identities=18% Similarity=0.094 Sum_probs=48.4
Q ss_pred CcchhhhhHHHHHHHHHHHhhhhhhhhhccCCC-ccc-----Ccccc---ccc-CcchHHHHHHHHHHHHHHhhhhhhhh
Q 004462 274 SVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD-SAN-----RIFYD---SVP-DSLFWPVFVLAALAAMIASQAMISAT 343 (752)
Q Consensus 274 g~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~-~~~-----npFy~---siP-~~l~wP~~vlAtlAtIIASQA~ISg~ 343 (752)
.+|.|-.+-...+.-+.++-.+++-+....-|. +.. +|+.. ... .+..+-+.+++.+++.-+..+.+.+.
T Consensus 230 p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (466)
T COG0531 230 PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAIIIAILALLSLFGSLLAWILAV 309 (466)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566555554444444444444444443332 111 34432 222 35666666666666666667777777
Q ss_pred hhHHHHHHHhCCCCc
Q 004462 344 FSCIKQAMALGCFPR 358 (752)
Q Consensus 344 FSii~Qai~Lg~fPr 358 (752)
--+..+.-+-|++|+
T Consensus 310 sR~~~~~ardg~lP~ 324 (466)
T COG0531 310 SRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHhCCCccH
Confidence 777777778999998
No 14
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=55.59 E-value=3.9 Score=44.78 Aligned_cols=62 Identities=23% Similarity=0.418 Sum_probs=0.0
Q ss_pred HHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHH---HHHHHHHHHHHHhHHHHH
Q 004462 419 IVMLLIWQ--TNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFA---SVFLCVMYIWNYGSVLKY 483 (752)
Q Consensus 419 ~v~~~vW~--~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia---~v~~~iM~~W~~G~~~~~ 483 (752)
++|.+.|+ -++|..++|++.|+.-=++...|++. +=.||++++- .++|+-.++|-|-+.-..
T Consensus 124 ~Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 124 FYMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34555566 47888888888777655555566654 5689999865 467788899999877653
No 15
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=53.20 E-value=1.2e+02 Score=33.96 Aligned_cols=22 Identities=18% Similarity=0.129 Sum_probs=13.9
Q ss_pred hhhhhhhhHHHHHHHhCCCCce
Q 004462 338 AMISATFSCIKQAMALGCFPRL 359 (752)
Q Consensus 338 A~ISg~FSii~Qai~Lg~fPr~ 359 (752)
+.+.+.--++...-+-|.+||.
T Consensus 294 ~~~~~~sR~l~a~ardg~lP~~ 315 (442)
T TIGR00908 294 GIIYGYSRQIFALSRAGYLPES 315 (442)
T ss_pred HHHHHHHHHHHHHHhcCCccHH
Confidence 3444444555556678999964
No 16
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=51.97 E-value=2.2e+02 Score=32.18 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=32.0
Q ss_pred hhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhh---heeEEe--CCchhhhhhhhcchhhHHHHHH
Q 004462 343 TFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV---VVVSIF--QSTTDIANAYGIAEVGVMLVSS 414 (752)
Q Consensus 343 ~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i---~vv~~F--~~s~~l~~AYGiAV~~vM~iTT 414 (752)
.-...+++-+-|.+|+. .-++++ +| .|..-.++...+. ..++.| ..++...++|..-+..+.+.+-
T Consensus 293 ~~r~~~~~ardG~lP~~-f~k~nk--~g---~P~~Al~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 363 (435)
T PRK10435 293 VGQAGVRAANDGNFPKV-YGEVDK--NG---IPKKGLLLAAVKMTALMILITLMNSSGGKASDLFGELTGIAVLLTM 363 (435)
T ss_pred HHHHHHHHHhCCCccHH-HHhhCc--CC---CCHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 33455566788999974 223333 23 7776644422111 111111 1223356777765554444443
No 17
>PRK15049 L-asparagine permease; Provisional
Probab=51.28 E-value=2.7e+02 Score=32.36 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=12.2
Q ss_pred hhhhhhhhHHHHHHHhCCCCce
Q 004462 338 AMISATFSCIKQAMALGCFPRL 359 (752)
Q Consensus 338 A~ISg~FSii~Qai~Lg~fPr~ 359 (752)
+.+.++--++...-+-|.+|+.
T Consensus 321 s~~~~~sR~l~a~Ardg~lP~~ 342 (499)
T PRK15049 321 SGLYCTGRILRSMAMGGSAPSF 342 (499)
T ss_pred HHHHHHHHHHHHHHhcCCcCHH
Confidence 3334444444444566899954
No 18
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=51.05 E-value=2.9e+02 Score=31.55 Aligned_cols=44 Identities=7% Similarity=-0.203 Sum_probs=29.2
Q ss_pred ccCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCce
Q 004462 316 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 359 (752)
Q Consensus 316 iP~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~ 359 (752)
..++..+.+.+.+.++++-+..+.+.++=-+..++-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555566666666666666666667777788999965
No 19
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=50.26 E-value=15 Score=42.31 Aligned_cols=91 Identities=21% Similarity=0.364 Sum_probs=58.2
Q ss_pred HhCCCCceeEEecCCccCC----ceeechhHHHHHHHhhheeEEeCCchhhhhhhhcchhhHHHHHHHHHHHHHH-----
Q 004462 352 ALGCFPRLKIIHTSRKRMG----QIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVML----- 422 (752)
Q Consensus 352 ~Lg~fPr~kIvHTS~~~~G----QIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~----- 422 (752)
+-|-.||+-+...=+...| |+|+|.+= ++ .+-=|.--=|-++-.+=-.++||.|..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L---iV-ilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL---IV-ILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh---hh-HHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3689999999988888787 99999862 11 11112222355555666889999999999988765221
Q ss_pred HHHhcchHHHHHHHHHHHH-HHHHH
Q 004462 423 LIWQTNLLLVLCFPLVFGS-VELLY 446 (752)
Q Consensus 423 ~vW~~~~~~~~~f~~~F~~-ie~~f 446 (752)
+|--.-+.+.++|+.+|++ +|-++
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA~ 325 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYAA 325 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHHH
Confidence 1122235566777777765 44433
No 20
>TIGR00930 2a30 K-Cl cotransporter.
Probab=47.37 E-value=6.6e+02 Score=32.19 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=30.1
Q ss_pred hhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhh
Q 004462 337 QAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIAN 400 (752)
Q Consensus 337 QA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~ 400 (752)
-+.+.|+=-++...-+-|.+|..+..-. ..++==.|..-.++..+..++.+.+.+-+.|+.
T Consensus 403 la~l~~asRvl~AmArDg~lP~l~~fak---v~~k~~tP~~Alllt~iIa~l~ili~~l~~ia~ 463 (953)
T TIGR00930 403 LASLVSAPRLFQALCKDNIYPFLQFFGK---GYGKNGEPLRAYLLTAFIAEGFILIAELNTIAP 463 (953)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcchhhcc---cCCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3445555555555667789996533321 111112566655554444444344444444544
No 21
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=45.74 E-value=21 Score=38.05 Aligned_cols=31 Identities=23% Similarity=0.598 Sum_probs=25.7
Q ss_pred hccCCccHHHHHHHHHHHHHHHHHHhHHHHH
Q 004462 453 KIAEGGWLPLAFASVFLCVMYIWNYGSVLKY 483 (752)
Q Consensus 453 K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~ 483 (752)
|=.+|||+.++++.++..+..+|++--+.+.
T Consensus 257 ~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 257 VSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred cccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 3348999999999999999999998655443
No 22
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=44.73 E-value=2.7e+02 Score=26.16 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=21.8
Q ss_pred hhcch-hhHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHH
Q 004462 402 YGIAE-VGVMLVSSTLVTIVMLLIWQTN-LLLVLCFPLVFGS 441 (752)
Q Consensus 402 YGiAV-~~vM~iTT~L~~~v~~~vW~~~-~~~~~~f~~~F~~ 441 (752)
|-++. ..-+.++|.+..+.+...++.+ ++..+++.+++..
T Consensus 85 y~~~~~~lGf~~at~~~~~~~~~~~g~r~~~~~~~~s~~~~~ 126 (141)
T PF07331_consen 85 YVLLLEYLGFIIATFLFLFAFMLLLGERRWLRLLLISVVFAA 126 (141)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 54444 3346677777666666666655 4444444443333
No 23
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=42.12 E-value=2.7e+02 Score=31.78 Aligned_cols=26 Identities=19% Similarity=0.521 Sum_probs=18.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHH
Q 004462 458 GWLPLAFASVFLCVMYIWNYGSVLKY 483 (752)
Q Consensus 458 GW~pl~ia~v~~~iM~~W~~G~~~~~ 483 (752)
-|.++++++++++.+..|....++.|
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~~ 479 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKEF 479 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceeec
Confidence 59999998888888877765433333
No 24
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=40.84 E-value=6.1e+02 Score=29.04 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=19.7
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhCCCCc---eeEEec
Q 004462 330 LAAMIASQAMISATFSCIKQAMALGCFPR---LKIIHT 364 (752)
Q Consensus 330 lAtIIASQA~ISg~FSii~Qai~Lg~fPr---~kIvHT 364 (752)
++...+..+.+.++=-++...-+-|.+|. +.-+|.
T Consensus 307 i~~~~~~~~~~~~~sR~~~a~Ardg~lP~s~~~~~v~~ 344 (475)
T TIGR03428 307 IAILVCTLAIQTAGSRLMFSMARDGKLPASAQLSRVHP 344 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHhcccCC
Confidence 33334444444455555556667899996 454454
No 25
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=40.12 E-value=2.9e+02 Score=31.51 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=13.9
Q ss_pred ccHHHHHHHHHHHHHHHHH
Q 004462 458 GWLPLAFASVFLCVMYIWN 476 (752)
Q Consensus 458 GW~pl~ia~v~~~iM~~W~ 476 (752)
-|.++++++++++...-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666554
No 26
>TIGR00909 2A0306 amino acid transporter.
Probab=39.41 E-value=1.8e+02 Score=32.41 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=38.4
Q ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchh
Q 004462 318 DSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTD 397 (752)
Q Consensus 318 ~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~ 397 (752)
++.-+-+.+.+.++.+.+..+.+.+.=-++...-+.|.+|+. .-++++|. | .|..--++..+...+...|.+.+.
T Consensus 276 ~~~~~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~~-~---~P~~a~~~~~~i~~~~~~~~~~~~ 350 (429)
T TIGR00909 276 GIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPKT-G---TPHMSIIIFSLTAALLASLVPLEG 350 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCCC-C---CcHHHHHHHHHHHHHHHHHcCHHH
Confidence 333343444444444444444444444445555578999973 22333221 1 676533333333333233445455
Q ss_pred hhhhhhcc
Q 004462 398 IANAYGIA 405 (752)
Q Consensus 398 l~~AYGiA 405 (752)
+.+..+++
T Consensus 351 l~~~~~~~ 358 (429)
T TIGR00909 351 LAELTSIG 358 (429)
T ss_pred HHHHHHHH
Confidence 55544333
No 27
>PRK11387 S-methylmethionine transporter; Provisional
Probab=37.93 E-value=4.5e+02 Score=30.04 Aligned_cols=12 Identities=17% Similarity=0.130 Sum_probs=7.6
Q ss_pred HHHHHhCCCCce
Q 004462 348 KQAMALGCFPRL 359 (752)
Q Consensus 348 ~Qai~Lg~fPr~ 359 (752)
...-+-|.+|+.
T Consensus 317 ~a~ardg~lP~~ 328 (471)
T PRK11387 317 WSLSNEGTLPAC 328 (471)
T ss_pred HHHHhcCCcCHH
Confidence 334466899964
No 28
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=34.51 E-value=4.2e+02 Score=30.26 Aligned_cols=96 Identities=13% Similarity=0.021 Sum_probs=43.2
Q ss_pred chhhh--hhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhc--cCCCc---ccCcccccc----cCcchHHHHHHHHH
Q 004462 262 RAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLM--KYPDS---ANRIFYDSV----PDSLFWPVFVLAAL 330 (752)
Q Consensus 262 GaEAL--yADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll--~~p~~---~~npFy~si----P~~l~wP~~vlAtl 330 (752)
|.|+. .|.==+-.+|.|-.|-.. +.-...+.|+-....+. ..+++ ..+||-... -++...-+.+++.+
T Consensus 226 G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~ 304 (469)
T PRK11049 226 GIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 304 (469)
T ss_pred cHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHHHHHHHHHH
Confidence 55532 333335567777777643 33334455555444332 12232 224542211 11222222233333
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhCCCCc
Q 004462 331 AAMIASQAMISATFSCIKQAMALGCFPR 358 (752)
Q Consensus 331 AtIIASQA~ISg~FSii~Qai~Lg~fPr 358 (752)
+.+-+..+.+.+.=-++...-+-|.+|+
T Consensus 305 s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 305 SAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 3333444444444445555557899995
No 29
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=30.78 E-value=6.6e+02 Score=28.72 Aligned_cols=43 Identities=9% Similarity=-0.062 Sum_probs=24.5
Q ss_pred cCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCce
Q 004462 317 PDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 359 (752)
Q Consensus 317 P~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPr~ 359 (752)
.++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+.
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3444333333344444444555666666666666688999963
No 30
>PRK11492 hyfE hydrogenase 4 membrane subunit; Provisional
Probab=30.20 E-value=6.2e+02 Score=26.78 Aligned_cols=145 Identities=12% Similarity=0.109 Sum_probs=77.8
Q ss_pred hhhhhhhhHHHHHH-----HhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcchhhHHHH
Q 004462 338 AMISATFSCIKQAM-----ALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLV 412 (752)
Q Consensus 338 A~ISg~FSii~Qai-----~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~vM~i 412 (752)
..+.|.-.++-.++ =.....|+++.+--+...|..+-+.+.-.+.+.|..++.-+....+...-+.++++.+.+.
T Consensus 57 L~~~a~~~l~~K~iliP~lL~r~~~k~~~~re~~p~i~~~~s~ll~~~~~i~s~~~~~~i~~~~~~~~~~~l~~a~~lf~ 136 (216)
T PRK11492 57 LLIWSITAFITKVLLVPLIMTYAARKLGDNIEEEPVFGPAMSILLAALIVLLCAFVVQPVKLPMALGLKPALAVSLGHFL 136 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccchHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Confidence 34444444444433 2334567777656666677777777777777777777766554444444455666655555
Q ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH-HHHHH-HHhhc-c----CCccHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 004462 413 SSTLVTIVMLLIWQTNLLLVLCFPLVFGSVEL-LYMSA-VLSKI-A----EGGWLPLAFASVFLCVMYIWNYGSVLKYRS 485 (752)
Q Consensus 413 TT~L~~~v~~~vW~~~~~~~~~f~~~F~~ie~-~f~sa-~l~K~-~----~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~ 485 (752)
..++..+ . |+|.+..+. .|..+|- +++.. .+.+- | -|--+-.+++.+++.+.. ..-+
T Consensus 137 iGl~~~i----~-Rrn~i~~ii---g~~~meNgv~L~~~~~~~~~p~~VE~g~~~d~l~av~i~~i~a--------~~i~ 200 (216)
T PRK11492 137 LGLLCIV----S-QRNILKQIF---GYCLMENGSHLTLALLAYNAPELVEIGIATDAIFAVIIMVLLA--------RKIY 200 (216)
T ss_pred HHHHHHH----H-HhHHHHHHH---HHHHHHHHHHHHHHHHHhhcchhhhccccccHHHHHHHHHHHH--------HHHH
Confidence 5544433 2 455444332 2333332 12211 12222 2 144567778888887777 2222
Q ss_pred HHhcCCChHHHHH
Q 004462 486 EVREKISMDFLLD 498 (752)
Q Consensus 486 ~~~~~~s~~~~~~ 498 (752)
+..+.++.|++.+
T Consensus 201 r~~~sid~~~l~~ 213 (216)
T PRK11492 201 RTHGTLDVNKLTA 213 (216)
T ss_pred HhcCCCcHHHHHh
Confidence 3456677776654
No 31
>PRK10746 putative transport protein YifK; Provisional
Probab=29.78 E-value=9e+02 Score=27.73 Aligned_cols=27 Identities=15% Similarity=0.065 Sum_probs=19.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHHH
Q 004462 458 GWLPLAFASVFLCVMYIWNYGSVLKYR 484 (752)
Q Consensus 458 GW~pl~ia~v~~~iM~~W~~G~~~~~~ 484 (752)
.......+.+++.+++.+....+..++
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~~ 453 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNRH 453 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 456788888888888887776554443
No 32
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=27.85 E-value=5.9e+02 Score=28.14 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=78.4
Q ss_pred chhhhhhccCCCCcchhhhhHHHHHHHHHHHhhhhhhhhhccCCCc----ccC------ccccc-ccCcchHHHHHHHHH
Q 004462 262 RAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDS----ANR------IFYDS-VPDSLFWPVFVLAAL 330 (752)
Q Consensus 262 GaEALyADlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQgA~Ll~~p~~----~~n------pFy~s-iP~~l~wP~~vlAtl 330 (752)
|-|+.=.=.+-.-+|.+..+=..-+.-+.++.-+..-++...-|.+ .+| .+++. -.+++.+.+.+++.+
T Consensus 203 G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 282 (426)
T PF13520_consen 203 GFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAIL 282 (426)
T ss_dssp TTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred cccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhcccccccccccccccccc
Confidence 5555433333343466666655544444444444444444443321 112 22222 245788888888888
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhh-hee--EEeC---Cchhhhhhhhc
Q 004462 331 AAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV-VVV--SIFQ---STTDIANAYGI 404 (752)
Q Consensus 331 AtIIASQA~ISg~FSii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i-~vv--~~F~---~s~~l~~AYGi 404 (752)
+.+-+-.+.+.+.--++.+.-+-|.+|+ +..|++| .| .|..-.+++..+. ++. ..|- +-+.+.+.+.+
T Consensus 283 ~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~ 356 (426)
T PF13520_consen 283 SLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSV 356 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHH
T ss_pred ccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 8887777777777777777888899993 3334442 22 3655544444433 222 2232 33556666666
Q ss_pred chhhHHHHH
Q 004462 405 AEVGVMLVS 413 (752)
Q Consensus 405 AV~~vM~iT 413 (752)
......+++
T Consensus 357 ~~~~~~~~~ 365 (426)
T PF13520_consen 357 GYLISYILV 365 (426)
T ss_dssp HTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655555555
No 33
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=27.63 E-value=1.3e+02 Score=31.32 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHHHhhhhhhhhh-ccCCCcccCcccccccCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Q 004462 280 IAFTLVVFPCLLLAYMGQAAYL-MKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAM 351 (752)
Q Consensus 280 law~~~V~PaLlL~Y~GQgA~L-l~~p~~~~npFy~siP~~l~wP~~vlAtlAtIIASQA~ISg~FSii~Qai 351 (752)
+|=+.+=+|||+++|+ +.+ +.||.+..| -.+-+--++.|+..=++-||+ +|-.|+++..-+
T Consensus 88 iAs~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 88 IASLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 3444556799999996 333 668877666 334444555555555566777 667776665543
No 34
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=27.10 E-value=2.1e+02 Score=33.63 Aligned_cols=31 Identities=26% Similarity=0.236 Sum_probs=18.3
Q ss_pred HHhhccCCccHHHHHHHHHHHHHHHHHHhHHHH
Q 004462 450 VLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLK 482 (752)
Q Consensus 450 ~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~ 482 (752)
.+.||-+||-- .-+.++..++..|-|.|+++
T Consensus 92 ~il~iw~GGLs--i~GGlIGg~l~~~~y~r~~k 122 (460)
T PRK13108 92 AALRIWDGGLG--IWGAVTLGVMGAWIGCRRCG 122 (460)
T ss_pred HHHhhccCCch--HHHHHHHHHHHHHHHHHHhC
Confidence 45577788752 33555555666666665543
No 35
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=27.08 E-value=4.2e+02 Score=29.91 Aligned_cols=51 Identities=12% Similarity=0.011 Sum_probs=23.5
Q ss_pred hHHHHHHHhCCCCceeEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhh
Q 004462 345 SCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIAN 400 (752)
Q Consensus 345 Sii~Qai~Lg~fPr~kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~ 400 (752)
-++.+.-+-|.+|+. .-+.++|+ | .|..--++.....++.+.+.+-+.+.+
T Consensus 305 R~~~a~ardg~lp~~-~~~v~~~~-~---tP~~a~l~~~~~~~~~~~~~~~~~l~~ 355 (445)
T PRK11357 305 RLEYAMAKDNLFFKC-FGHVHPKY-N---TPDVSIILQGALGIFFIFVSDLTSLLG 355 (445)
T ss_pred hHHHHHHhcCCchHH-HHHhCCCC-C---CCHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 344455567888964 11222221 1 576655554333333333344444444
No 36
>PF02660 G3P_acyltransf: Glycerol-3-phosphate acyltransferase; InterPro: IPR003811 This entry describes glycerol-3-phosphate acyltransferase. It catalyses the transfer of an acyl group from acyl-phosphate (acyl-PO4) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilises acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. ; GO: 0005886 plasma membrane
Probab=22.60 E-value=6.4e+02 Score=25.64 Aligned_cols=84 Identities=15% Similarity=0.209 Sum_probs=45.4
Q ss_pred eEEeCCchhhhhhhhcchhhHHHHHHHH--HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHH
Q 004462 389 VSIFQSTTDIANAYGIAEVGVMLVSSTL--VTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFAS 466 (752)
Q Consensus 389 v~~F~~s~~l~~AYGiAV~~vM~iTT~L--~~~v~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~ 466 (752)
-+.||--..+|.+.|+-....-..+-+. ..++...++|...+-.+..+.++... .++ .+.+++..+.+
T Consensus 90 ~l~FkGGKGvAt~~G~ll~l~p~~~li~~~~~~~~~~~~r~~s~~s~~~~~~~~~~--~~~--------~~~~~~~~~~~ 159 (178)
T PF02660_consen 90 FLKFKGGKGVATSLGVLLALSPWLALIALAVFLILLLITRYVSLASIIAFIILPIL--AWL--------WGYSLAYVLFA 159 (178)
T ss_pred hhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--HHH--------HhCCHHHHHHH
Confidence 3568989999999988655544333322 22333334443322222212111111 111 56777777777
Q ss_pred HHHHHHHHHHHhHHHH
Q 004462 467 VFLCVMYIWNYGSVLK 482 (752)
Q Consensus 467 v~~~iM~~W~~G~~~~ 482 (752)
++..++.+|++-+..+
T Consensus 160 ~~l~~li~~~h~~Ni~ 175 (178)
T PF02660_consen 160 IILALLIIYRHRENIK 175 (178)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777788887766554
No 37
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=22.33 E-value=34 Score=37.58 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccCCCCcchhhhhHHHHHHHHHHHhhhhhh--hhhccCCCccc
Q 004462 269 DLGHFSVKAIQIAFTLVVFPCLLLAYMGQA--AYLMKYPDSAN 309 (752)
Q Consensus 269 DlGHFg~~~Iqlaw~~~V~PaLlL~Y~GQg--A~Ll~~p~~~~ 309 (752)
+=++|||.+|||+|-.--=+| ||+ .=||+|||-+.
T Consensus 171 gk~Y~GRG~iQlsWNyNYG~a------g~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNYNYGAA------GKALGLDLLRNPELVA 207 (286)
T ss_pred CCcccccCcccccccccccHh------HhhcCchhhcCcchhc
Confidence 568999999999998744444 553 34899999776
No 38
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=22.32 E-value=1.2e+03 Score=27.72 Aligned_cols=62 Identities=10% Similarity=0.158 Sum_probs=31.9
Q ss_pred hhhhhhhHHH---HHHHhCCCCce-eEEecCCccCCceeechhHHHHHHHhhheeEEeCCchhhhhhhhcch
Q 004462 339 MISATFSCIK---QAMALGCFPRL-KIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAE 406 (752)
Q Consensus 339 ~ISg~FSii~---Qai~Lg~fPr~-kIvHTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV 406 (752)
+.+..++..| ..-+-|.+|+. .-+|...+ .|...-++...+.++...+.+.+.+.+...++.
T Consensus 329 l~~~~~~~sRil~amarDGlLP~~fakv~~r~~------tP~~Ail~~~iv~~il~~~~~~~~l~~l~sig~ 394 (557)
T TIGR00906 329 LLGGMFPLPRVIYAMARDGLLFKWLAQINSKTK------TPINATVVSGAIAALMAFLFDLKALVDLLSIGT 394 (557)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHhccCCCCC------CcHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3444444333 34466899973 12232221 677665555544444445556666666554443
No 39
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=21.65 E-value=2.1e+02 Score=29.90 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=29.3
Q ss_pred HHHHhhheeEEeCCchhhhhhh--hcchhhHHHHHHHHHHHHHHHH
Q 004462 381 LMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 424 (752)
Q Consensus 381 Lmi~~i~vv~~F~~s~~l~~AY--GiAV~~vM~iTT~L~~~v~~~v 424 (752)
.+.-.+.+.-...-|+++.||. |+||+.||.+++.+..++-..+
T Consensus 18 vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 18 VLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred HHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444455567777766 6778888999998888776655
No 40
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=21.49 E-value=4.5e+02 Score=28.97 Aligned_cols=61 Identities=21% Similarity=0.307 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcchHH------HHHH-----HHHHHHHH--HHHHHHHHhhccCCccHHHHHHHHHHHH
Q 004462 408 GVMLVSSTLVTIVMLLIWQTNLLL------VLCF-----PLVFGSVE--LLYMSAVLSKIAEGGWLPLAFASVFLCV 471 (752)
Q Consensus 408 ~vM~iTT~L~~~v~~~vW~~~~~~------~~~f-----~~~F~~ie--~~f~sa~l~K~~~GGW~pl~ia~v~~~i 471 (752)
..-++-|+-++.+|+..||..++. .+.. .++|..+. +.+|..+ +.+|||+-+.++.+...+
T Consensus 148 ~qAvl~T~~vf~~ml~lYk~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~---l~~~gplgI~~slv~v~i 221 (274)
T PF12811_consen 148 FQAVLGTFGVFAVMLALYKTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGS---LRDGGPLGIGFSLVVVGI 221 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cccCChHHHHHHHHHHHH
Confidence 334455666667777777655322 1111 12333333 2333333 889999988887765443
No 41
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.94 E-value=95 Score=25.00 Aligned_cols=28 Identities=32% Similarity=0.538 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCChH
Q 004462 467 VFLCVMYIWNYGSVLKYRSEVREKISMD 494 (752)
Q Consensus 467 v~~~iM~~W~~G~~~~~~~~~~~~~s~~ 494 (752)
++|+....|.|-++.+-+++....+|++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3344444555544445455555566654
No 42
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=20.72 E-value=2.5e+02 Score=29.60 Aligned_cols=44 Identities=11% Similarity=0.315 Sum_probs=28.6
Q ss_pred HHHHhhheeEEeCCchhhhhhh--hcchhhHHHHHHHHHHHHHHHH
Q 004462 381 LMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 424 (752)
Q Consensus 381 Lmi~~i~vv~~F~~s~~l~~AY--GiAV~~vM~iTT~L~~~v~~~v 424 (752)
.+.-.+.+.-...-|+++.||- |+||+.||.+++.+..++-.++
T Consensus 17 vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 17 ALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred HHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444455566666665 6778888888888888776554
No 43
>TIGR02454 CbiQ_TIGR cobalt ABC transporter, permease protein CbiQ. This model represents the permease component of the cobalt-specific ABC transporter. This model finds permeases which are generally next to the other subunits of the complex (CbiN and CbiO) or the cobalamin biosynthesis protein CbiM which is a transmembrane protein which likely interacts with the complex in some manner. In genomes which possess all of these subunits the ATPase is most likely running in the direction of import (for the biosynthesis of coenzyme B12). In other genomes, this subunit may be involved in the export of cobalt and/or other closely related heavy metals.
Probab=20.12 E-value=3.9e+02 Score=26.62 Aligned_cols=45 Identities=11% Similarity=-0.004 Sum_probs=22.0
Q ss_pred CccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHHhcC
Q 004462 457 GGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGS 501 (752)
Q Consensus 457 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~~~~ 501 (752)
|||+++.-..+...+..+.|--.....-.-.--..+.+++...++
T Consensus 80 ~~~~~it~~gl~~~~~~~lR~~~~~~~~~~~~~TT~~~~l~~~l~ 124 (198)
T TIGR02454 80 GPLLSITREGLVYALTLALRSLTSLSAVYLLALTTPFPELLSALR 124 (198)
T ss_pred hhhheecHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 344544444444444444444433333333334566677766664
Done!