BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004463
(752 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224079239|ref|XP_002305805.1| predicted protein [Populus trichocarpa]
gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/758 (67%), Positives = 617/758 (81%), Gaps = 12/758 (1%)
Query: 4 QECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 63
++ G+ RY+PLLE+L+NC+F ELE+K+GFCIDC L ILDRASEDLE+IR+ERKRNM
Sbjct: 154 KDSGDCSERYAPLLEILQNCSFQIELEKKVGFCIDCNLSKILDRASEDLEIIRSERKRNM 213
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
ENLD LLK ++A+IFQAGGIDKPL+TKRRSR+CVG++ASH+YL+PDG+ LNVSSSG TYF
Sbjct: 214 ENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCVGVRASHRYLIPDGVVLNVSSSGVTYF 273
Query: 124 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 183
MEP AVE NN+EV LS+SE AEE AILSLLT+EIA+S R+IKY++D ++E+DL+FARA
Sbjct: 274 MEPGEAVELNNLEVMLSDSEKAEEIAILSLLTSEIAESARDIKYMLDGIIEVDLSFARAA 333
Query: 184 FAQWMDGVCPILSSQSHVS-------FDSSINIEGIKHPLLLGSSLRSLS--AASSNSNP 234
+A WM+GV PI +S+ + SI+IEGI+HPLL G+S + LS S++ N
Sbjct: 334 YAYWMNGVRPIWTSEGCGGISSSGGDYLLSIDIEGIRHPLLNGTSRKRLSNILGSNSLNS 393
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
++ D E+S + G SK +S+FPVPI+IKVEC TRVVVI+GPNTGGKTASMKTLG+ASLM
Sbjct: 394 MEVD-EDSMLDTGKPSKNVSEFPVPINIKVECGTRVVVISGPNTGGKTASMKTLGVASLM 452
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
SKAGLYLPAKN P+LPWFD +LADIGDHQSLEQNLSTFSGHISRI ILE+ S ESLVL+
Sbjct: 453 SKAGLYLPAKNTPKLPWFDFVLADIGDHQSLEQNLSTFSGHISRICKILEVASNESLVLV 512
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DEI SGTDPSEGVAL+TSIL YLRD V LAVVTTHYADLS LKDKD+RFENAA EFSLET
Sbjct: 513 DEICSGTDPSEGVALSTSILHYLRDHVNLAVVTTHYADLSLLKDKDSRFENAAMEFSLET 572
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
L+PTY+ILWG TGDSNAL+IAKSIGFD II+RA+K VE+L PE+QQ R LYQSL+EE
Sbjct: 573 LQPTYQILWGCTGDSNALSIAKSIGFDSNIIERARKWVEKLVPEKQQERSGMLYQSLLEE 632
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 534
R +LE+QAR ASLH EIM+LY EI+ E++DLD R L AKETQ VQ EL A QI+T
Sbjct: 633 RNRLEAQARKGASLHTEIMELYHEIQAESEDLDGRVKALMAKETQLVQLELKAANSQIET 692
Query: 535 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVH 594
VVQ+ E QLR AS D+ NSLIK+SESAIA+IVEAH D SET+TSS+TPQ GEQV
Sbjct: 693 VVQNVETQLRKASPDQFNSLIKKSESAIASIVEAHCSSDSLPASETDTSSYTPQLGEQVL 752
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
VK LG+KLATVVE P DD+TVLVQYGK+RVR+KK++IR I + K+ A P L++Q
Sbjct: 753 VKRLGNKLATVVEAPRDDETVLVQYGKIRVRMKKSDIRAIKSDKKSKATILVPSLKRQV- 811
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGM 714
+QS S + +EE S+GPRVQTSKN++DLRGMRVEEA+ L++A++ E SV+FV+HGM
Sbjct: 812 -KQSFSELNKDEEVSHGPRVQTSKNTVDLRGMRVEEAAQHLNMAISAREPLSVIFVVHGM 870
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
GTG VKE LE+L HPRVAKYE ESPMN+GCTVAYIK
Sbjct: 871 GTGAVKEGALEVLGKHPRVAKYEPESPMNFGCTVAYIK 908
>gi|356521349|ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
Length = 914
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/765 (65%), Positives = 610/765 (79%), Gaps = 24/765 (3%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
RY PLL++L+NCNF LE KI FCIDCKL IILDRASEDLE+IR+ERKRN+E LDSLL
Sbjct: 151 QRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIILDRASEDLEIIRSERKRNIEILDSLL 210
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K+V++QIFQAGGID+PLI KRRSRMCVGI+ASH+YLLPDG+ LNVSSSGATYFMEPK A+
Sbjct: 211 KEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVVLNVSSSGATYFMEPKDAI 270
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN+EVRLS+SE AEE+ ILS+L +EIA SE +I +L+D++L++DLAFARA +AQWM+G
Sbjct: 271 DLNNLEVRLSSSEKAEESVILSMLASEIANSESDINHLLDKILKVDLAFARAAYAQWMNG 330
Query: 191 VCPILSSQSHVSFDS----------------SINIEGIKHPLLLGSSLRSLSAASSNSNP 234
VCPI S + DS +++I GI+HPLLL SSL ++S + +
Sbjct: 331 VCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDIVGIRHPLLLESSLENISDNLTLRSG 390
Query: 235 LKSDVENSEMTVGS--LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 292
++ N T+ S + +GISDFPVP+D K+ TRVVVI+GPNTGGKTASMKTLGLAS
Sbjct: 391 NAAEFGNGNGTMASKYMPQGISDFPVPVDFKIGHGTRVVVISGPNTGGKTASMKTLGLAS 450
Query: 293 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 352
LMSKAG++LPAK +P+LPWFDLILADIGDHQSLEQNLSTFSGHISRI ILE+ S +SLV
Sbjct: 451 LMSKAGMHLPAKKNPKLPWFDLILADIGDHQSLEQNLSTFSGHISRICKILEVASTQSLV 510
Query: 353 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 412
LIDEIG GTDPSEGVAL+ SILQYL+DRV LAVVTTHYADLS +K+KDTRF+NAA EFSL
Sbjct: 511 LIDEIGGGTDPSEGVALSASILQYLKDRVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSL 570
Query: 413 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 472
ETL+PTYRILWG TGDSNAL+IA+SIGFDR II RAQK VE+ +PE+QQ R+ LYQSL
Sbjct: 571 ETLQPTYRILWGCTGDSNALSIAQSIGFDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQ 630
Query: 473 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 532
EER +L++QA AAS+HAEIM +Y EI+ EA+DLD+R L AKETQQVQ EL AK QI
Sbjct: 631 EERNQLKAQAEKAASVHAEIMSVYNEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQI 690
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 592
+TV+Q FE QLR + D++N LI+ESESAIA+IV+AH P D F ++E + + +TPQ GEQ
Sbjct: 691 ETVIQKFEKQLRISGRDQLNYLIRESESAIASIVKAHTPADSFPINEADRALYTPQIGEQ 750
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
VHVK LG KLATVVE PGDD T++VQYGK++VRVKK+NI IP+S RKNA + +
Sbjct: 751 VHVKGLGGKLATVVESPGDDGTIMVQYGKVKVRVKKSNIIAIPSS-RKNAVTSSSSTHQG 809
Query: 653 QEDRQSGSA-----GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSV 707
++ ++G +N++ SYGP V+TSKN++DLRGMRVEEAS QL++A+ SV
Sbjct: 810 RQSLRNGEYRDNVDNKTNDDISYGPVVRTSKNTVDLRGMRVEEASIQLEMAINASRPYSV 869
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
LFVIHGMGTG VKER L+IL+NHPRV +E ESPMNYG T+AY+K
Sbjct: 870 LFVIHGMGTGAVKERALQILQNHPRVTNFEPESPMNYGSTIAYVK 914
>gi|255556027|ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
gi|223541711|gb|EEF43259.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
Length = 873
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/755 (65%), Positives = 599/755 (79%), Gaps = 42/755 (5%)
Query: 4 QECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 63
++ G+ R PLLE+ ++CN +LE+KIGFCIDC LLIILDRASEDLELIR ERK+ M
Sbjct: 153 KDGGDCLERSYPLLEIFRSCNLQIQLEQKIGFCIDCNLLIILDRASEDLELIRYERKKTM 212
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
ENLD+LLK ++ +IFQAGGID+P +TKRRSR+CVG++A+H+YL+PDG+ L+VS SGATYF
Sbjct: 213 ENLDNLLKGISTRIFQAGGIDRPFVTKRRSRLCVGVRATHRYLIPDGVILDVSGSGATYF 272
Query: 124 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 183
+EP AVE NN+EV LSNSE AEE AILSLLT+EIA+SER+IK L+D +LE+DLAFARA
Sbjct: 273 VEPGDAVELNNLEVMLSNSERAEEIAILSLLTSEIAESERDIKKLLDGILEVDLAFARAA 332
Query: 184 FAQWMDGVCPILSSQ-------SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 236
+A+ ++GVCP +S+ S ++ SI+IEGI+HPLLLGSS +
Sbjct: 333 YARQINGVCPTFTSEGYEGEPSSRANYALSIDIEGIQHPLLLGSSQQK------------ 380
Query: 237 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
FPVPI+IKVEC TRVVVI+GPNTGGKTASMKTLG+ASLMSK
Sbjct: 381 -------------------FPVPINIKVECGTRVVVISGPNTGGKTASMKTLGIASLMSK 421
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
AGL+LPA+N P++PWFD++LADIGD+QSLEQNLSTFSGHISRI ILE+ S+ESLVLIDE
Sbjct: 422 AGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLSTFSGHISRICKILEVTSKESLVLIDE 481
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
I SGTDPSEGVAL+TSILQYLRDRV LAVVTTHYADLS LKD D++FENAA EFSLETL+
Sbjct: 482 ICSGTDPSEGVALSTSILQYLRDRVNLAVVTTHYADLSLLKDSDSQFENAAMEFSLETLQ 541
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 476
PTY+ILWGSTG+SNAL+IAKSIGFD II+RA+K VE+L PE+QQHRK LY+SLM+ER
Sbjct: 542 PTYQILWGSTGNSNALSIAKSIGFDSNIIERAEKWVEKLIPEKQQHRKGLLYKSLMDERN 601
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
KLE+QAR AAS+HA+IM+LY EI+DEA +LD R L AKETQQVQQEL K QI+TVV
Sbjct: 602 KLEAQAREAASVHAQIMELYYEIQDEAGNLDSRIMALMAKETQQVQQELKATKSQIETVV 661
Query: 537 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
+FEN LR AS + NSLI++SESAIA+IVEAH P D+ SE + SS+TPQ GEQVH+K
Sbjct: 662 HNFENLLRKASPLQFNSLIRKSESAIASIVEAHYPADNLPASE-DVSSYTPQLGEQVHLK 720
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
G+K+ATVVE PG D+T+LVQYGK+RVRVKK++IR I KR A PRL++Q
Sbjct: 721 GFGNKVATVVEAPGKDETILVQYGKIRVRVKKSDIRAIQGKKRTEATKLVPRLKRQG--- 777
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGT 716
Q A + +E SYGPRVQTSKN++DLRGMRVEEA L++A++ E SV+FV+HGMGT
Sbjct: 778 QQSHAEVNKDEDSYGPRVQTSKNTVDLRGMRVEEAVLHLNMAISEREPHSVIFVVHGMGT 837
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
G VK+R LEIL HPRV YE ESPMN+GCTVAYI
Sbjct: 838 GAVKQRALEILGKHPRVTNYEAESPMNFGCTVAYI 872
>gi|358346679|ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula]
Length = 913
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/769 (64%), Positives = 609/769 (79%), Gaps = 26/769 (3%)
Query: 8 NIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 67
N HRYSPLLE+L+NCNFL LE +I FCIDC LL+ILDRASEDLE+IR+ERKRN+E LD
Sbjct: 147 NHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILD 206
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
SLLK+V++QIF+AGGID+P ITKRRSRMCVGI+AS++YLLP+GI LN SSSGATYFMEPK
Sbjct: 207 SLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPK 266
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
A++ NNMEVRLSNSE AEE AILS+L +EIA S+ EI YL+D++LE+DLAFARA +AQW
Sbjct: 267 EAIDLNNMEVRLSNSEAAEERAILSMLASEIANSKSEINYLLDKILEVDLAFARAAYAQW 326
Query: 188 MDGVCPILS-----------SQSHVSF----DSSINIEGIKHPLLLGSSLRSLS----AA 228
M+GVCPI S + +S D ++NIEG++HPLLL SSL ++S
Sbjct: 327 MNGVCPIFSLGTLEVCESVEKDNDISVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLR 386
Query: 229 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 288
S N+ L + N M S S+GI+DFPVP+D K+ TRVVVI+GPNTGGKTASMKTL
Sbjct: 387 SGNAAELGNG--NGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTL 444
Query: 289 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 348
GLASLMSKAG++LPAK P+LPWFDLIL DIGDHQSLEQNLSTFSGHISRI LE+ S+
Sbjct: 445 GLASLMSKAGMHLPAKKSPKLPWFDLILVDIGDHQSLEQNLSTFSGHISRIRKFLEVASK 504
Query: 349 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 408
+SLVLIDEIGSGTDPSEGVAL+ SILQYLR+ V LAVVTTHYADLS +K+KDT FENAA
Sbjct: 505 QSLVLIDEIGSGTDPSEGVALSASILQYLREHVNLAVVTTHYADLSTMKEKDTCFENAAM 564
Query: 409 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 468
EFSLETL+PTYR+LWG TGDSNAL+IA+SIGFD+ II AQK VE+L+PE+QQ R+ LY
Sbjct: 565 EFSLETLQPTYRVLWGCTGDSNALSIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGMLY 624
Query: 469 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 528
QSL EE+ +L++QA AAS+HAEIM++Y EI+ EA+DLDRR L AKE QQVQQEL A
Sbjct: 625 QSLQEEKNRLKAQAEKAASIHAEIMNVYSEIQGEAEDLDRRETMLMAKEAQQVQQELEDA 684
Query: 529 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN-TSSFTP 587
K Q++ V+Q FE QL+D +++NS+IKESE+AIA+IV+AH P F +++ + T+S+TP
Sbjct: 685 KSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGFPINDADRTTSYTP 744
Query: 588 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 647
QFGEQV VK LG KLATVVE+ GDD+T+LVQYGK++VRVKKN IR IP S + + A
Sbjct: 745 QFGEQVRVKGLGGKLATVVELLGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPVTSSAT 804
Query: 648 RLRKQQ----EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWE 703
+Q+ + R + N+++ YGP VQTSKN++DLRGMR+EEA+ L++A+ +
Sbjct: 805 HQGRQKPLNGKSRGNLEMNGGNDDSYYGPVVQTSKNTVDLRGMRLEEAAIHLEMAINASQ 864
Query: 704 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
SVLFVIHGMGTG VK+R L IL+ HPRV +E ESPMNYGCT+A +K
Sbjct: 865 PYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTIARVK 913
>gi|356521351|ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
Length = 902
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/760 (65%), Positives = 600/760 (78%), Gaps = 26/760 (3%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
RY PLL++L+NCNF LE KI FCIDCKL IILDRASEDLE+IR+ERKRN+E LDSLL
Sbjct: 151 QRYLPLLDILQNCNFQVGLERKIEFCIDCKLSIILDRASEDLEIIRSERKRNIEILDSLL 210
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K+V++QIFQAGGID+PLI KRRSRMCVGI+ASH+YLLPDG+ LNVSSSGATYFMEPK A+
Sbjct: 211 KEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVVLNVSSSGATYFMEPKDAI 270
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN+EVRLS+SE AEE+ ILS+L +EIA SE +I +L+D++L++DLAFARA +AQWM+G
Sbjct: 271 DLNNLEVRLSSSEKAEESVILSMLASEIANSESDINHLLDKILKVDLAFARAAYAQWMNG 330
Query: 191 VCPILSSQSHVSFDS----------------SINIEGIKHPLLLGSSLRSLSAASSNSNP 234
VCPI S + DS +++I GI+HPLLL SSL ++S + +
Sbjct: 331 VCPIFSLGNFEGRDSVEDDDDTLVTQEDDDLTVDIVGIRHPLLLESSLENISDNLTLRSG 390
Query: 235 LKSDVENSEMTVGS--LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 292
++ N T+ S + +GISDFPVP+D K+ TRVVVI+GPNTGGKTASMKTLGLAS
Sbjct: 391 NAAEFGNGNGTMASKYMPQGISDFPVPVDFKIGHGTRVVVISGPNTGGKTASMKTLGLAS 450
Query: 293 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 352
LMSKAG++LPAK +P+LPWFDLILADIGDHQSLEQNLSTFSGHISRI ILE+ S +SLV
Sbjct: 451 LMSKAGMHLPAKKNPKLPWFDLILADIGDHQSLEQNLSTFSGHISRICKILEVASTQSLV 510
Query: 353 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 412
LIDEIG GTDPSEGVAL+ SILQYL+DRV LAVVTTHYADLS +K+KDTRF+NAA EFSL
Sbjct: 511 LIDEIGGGTDPSEGVALSASILQYLKDRVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSL 570
Query: 413 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 472
ETL+PTYRILWG TGDSNAL+IA+SIGFDR II RAQK VE+ +PE+QQ R+ LYQSL
Sbjct: 571 ETLQPTYRILWGCTGDSNALSIAQSIGFDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQ 630
Query: 473 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 532
EER +L++QA AAS+HAEIM +Y EI+ EA+DLD+R L AKETQQVQ EL AK QI
Sbjct: 631 EERNQLKAQAEKAASVHAEIMSVYNEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQI 690
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 592
+TV+Q FE QLR + D++N LI+ESESAIA+IV+AH P D F ++E + + +TPQ GEQ
Sbjct: 691 ETVIQKFEKQLRISGRDQLNYLIRESESAIASIVKAHTPADSFPINEADRALYTPQIGEQ 750
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
VHVK LG KLATVVE PGDD T++VQYGK++VRVKK+NI IP+S RKNA + +
Sbjct: 751 VHVKGLGGKLATVVESPGDDGTIMVQYGKVKVRVKKSNIIAIPSS-RKNAVTSSSSTHQG 809
Query: 653 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIH 712
++ R V+TSKN++DLRGMRVEEAS QL++A+ SVLFVIH
Sbjct: 810 RQVR-------IKMFRYLLSLVRTSKNTVDLRGMRVEEASIQLEMAINASRPYSVLFVIH 862
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
GMGTG VKER L+IL+NHPRV +E ESPMNYG T+AY+K
Sbjct: 863 GMGTGAVKERALQILQNHPRVTNFEPESPMNYGSTIAYVK 902
>gi|449457723|ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 890
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/760 (62%), Positives = 592/760 (77%), Gaps = 40/760 (5%)
Query: 7 GNIFH-RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN 65
GN + R+ PL+E+L+NC+FL ELE KI FCIDC IILDRASEDLELIR E+KRNME
Sbjct: 157 GNHYSDRFLPLIEILQNCDFLVELERKIEFCIDCNYSIILDRASEDLELIRLEKKRNMEE 216
Query: 66 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 125
LDSLLK+V+ +I+QAGGID+PLITKRRSRMCV ++A+HK L+ DGI L+ SSSGATYFME
Sbjct: 217 LDSLLKEVSFKIYQAGGIDRPLITKRRSRMCVAVRATHKNLVSDGILLSTSSSGATYFME 276
Query: 126 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
PK AV+ NNMEVRLSNSE AEE +ILS+L+ EI++SE I+ L+D++LE+DLA ARA +
Sbjct: 277 PKNAVDLNNMEVRLSNSEKAEEISILSMLSTEISESENHIRCLLDKILELDLALARAAYG 336
Query: 186 QWMDGVCPILSSQSHVSFDSSI-------NIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 238
+WM GVCP S++ + +SSI +I+ I++PLLL + L+ S +
Sbjct: 337 RWMSGVCPCFSAKGYEGLNSSITDNTLSVDIDAIQNPLLLSNYLKKFSGS---------- 386
Query: 239 VENSEMTVGSLSKGISDFPVPI--DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
+ DFP+PI DIK+ +TRVVVI+GPNTGGKTAS+KTLGLASLM+K
Sbjct: 387 --------------VPDFPMPIAIDIKIMHQTRVVVISGPNTGGKTASLKTLGLASLMAK 432
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
AG+YLPAKNHP+LPWFDL+LADIGDHQSLEQNLSTFSGHISRI ILE+ S ESLVLIDE
Sbjct: 433 AGMYLPAKNHPKLPWFDLVLADIGDHQSLEQNLSTFSGHISRICKILEVSSDESLVLIDE 492
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
IGSGTDPSEGVAL+TSIL+YL++ V LA+VTTHYADLS +KD D+ FENAA EFSLETL+
Sbjct: 493 IGSGTDPSEGVALSTSILRYLKNCVNLAIVTTHYADLSRIKDSDSSFENAAMEFSLETLK 552
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 476
PTY+ILWGSTGDSNAL IA+SIGFD II+RA++ + L PERQ RK L++SL+ ER
Sbjct: 553 PTYKILWGSTGDSNALTIAESIGFDPVIIERAKQWMVNLTPERQDERKGSLFKSLIGERD 612
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
KLE+Q + ASLHA+I LY EI++EAKDLD+R L A ET++ QQE K +I+TVV
Sbjct: 613 KLEAQRQKVASLHADISALYYEIQEEAKDLDKRERALMALETKRAQQEAAAIKSKIETVV 672
Query: 537 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
Q+FE QL+ + D+INSLIK++ESAIA+I EA+ P + S NT+S+TPQ GEQV V
Sbjct: 673 QEFEEQLKTSGTDQINSLIKKAESAIASICEAYSPTEHSRPSVANTNSYTPQLGEQVFVT 732
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
LG+KLATVVEV D++ +LVQYGK++ RVKK++++ +PNS +K AAN P +KQ R
Sbjct: 733 GLGNKLATVVEVSDDEEMILVQYGKIKARVKKSSVKALPNSGKKAAANTLPFSKKQ--GR 790
Query: 657 QSGSAGSSNEEA----SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIH 712
QS + S +E+ SYGP VQTSKN++DLRGMRVEEAS+ LD+A+A S SVLF+IH
Sbjct: 791 QSRESVSRPDESKDGDSYGPVVQTSKNTVDLRGMRVEEASYHLDMAIASRGSNSVLFIIH 850
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
GMGTG VKE VLE LR HPRVAKY+QESPMNYGCTVA++K
Sbjct: 851 GMGTGAVKEHVLETLRKHPRVAKYDQESPMNYGCTVAFLK 890
>gi|297840849|ref|XP_002888306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334147|gb|EFH64565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 891
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/750 (58%), Positives = 565/750 (75%), Gaps = 39/750 (5%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
R SPL+ L++ C+F L++KIGFCIDC + +ILDRASEDLE+IR+ER+RNME LDSLLK
Sbjct: 172 RVSPLVGLVQGCDFKDTLQQKIGFCIDCNMSMILDRASEDLEIIRSERRRNMEKLDSLLK 231
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K++ QIFQAGGID+PLIT+RRSRMCV I+A+HK LLP G+ L+VSSS AT ++EPK AVE
Sbjct: 232 KISTQIFQAGGIDRPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSSRATCYIEPKEAVE 291
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NNMEVR +NSE AEE AILS+LT+E++ ++++I +L+DR+LE+D+AFARA A+WM+GV
Sbjct: 292 LNNMEVRHANSEKAEEMAILSILTSEVSMAQKDILHLLDRILELDIAFARASHAKWMNGV 351
Query: 192 CPILSSQ---------SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
P ++S+ H S S++I+ +HPLLLGS L
Sbjct: 352 YPNVTSEHTKTPGLGGDHKSL--SVDIDSAQHPLLLGSVL-------------------- 389
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
GS + G+ FPVPIDIKVE +VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLP
Sbjct: 390 ----GSPNDGMV-FPVPIDIKVESRAKVVVISGPNTGGKTALLKTLGLISLMSKSGMYLP 444
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
AKN PRLPWFD ILADIGD QSLEQ+LSTFSGHISRI IL++ S SLVL+DEI SGTD
Sbjct: 445 AKNCPRLPWFDFILADIGDPQSLEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTD 504
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
PSEGVALATSILQY+++RV +AVV+THY DLS LKD + +F+NAA EFS+ETL+PT+R+L
Sbjct: 505 PSEGVALATSILQYIKNRVNVAVVSTHYGDLSRLKDNEPQFQNAAMEFSMETLQPTFRVL 564
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
WGSTG SNAL +AKSIGF+ I++ A K E+L PE+ RK L+QSL+EER KL+ QA
Sbjct: 565 WGSTGLSNALTVAKSIGFNTGILENAHKWTEKLNPEQDVERKGSLFQSLVEERNKLKLQA 624
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
+ H ++M+LY E+E E+ DL++R L KETQ+VQ++LN AK ++ +V +F++Q
Sbjct: 625 SKTEAFHRDLMNLYHELEHESHDLEKRERALLKKETQKVQEDLNSAKSKMQKLVAEFKSQ 684
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
L A AD+ NSLI ++E A+A I+EA P D S+ E S ++PQ GE+V V LGDKL
Sbjct: 685 LEIAQADQYNSLILKTEEAVAEIIEACCPIDLDSIEEP-YSDYSPQAGEKVLVTGLGDKL 743
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
TVVE PGDD+TVLVQ+GK+RVR+KK +I+P+P S +N + R ++Q + GS
Sbjct: 744 GTVVEEPGDDETVLVQHGKIRVRIKKKDIKPLPRSTSSQTSNRSLRSKRQVNMKDLGSVL 803
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKER 722
+ S R+QTSKN+LDLRGMR EEA HQLD+A++ +S S+LF+IHGMGTGV+KE
Sbjct: 804 QMQQ--SEPVRIQTSKNTLDLRGMRAEEAVHQLDMAISGRDSGSILFIIHGMGTGVIKEL 861
Query: 723 VLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
VLE LR H RV++YEQ +PMNYGCTVAYIK
Sbjct: 862 VLERLRKHTRVSRYEQANPMNYGCTVAYIK 891
>gi|334183641|ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2
from Synechocystis sp. and is a member of PF|00488 Muts
family of mismatch repair proteins [Arabidopsis
thaliana]
gi|332196205|gb|AEE34326.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 876
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/743 (58%), Positives = 565/743 (76%), Gaps = 30/743 (4%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
+R +PL+++L+ C+F L++KI FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLL
Sbjct: 163 NRVTPLVDILQGCDFKDTLQQKISFCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLL 222
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
KK++ +IF AGGI+KPLIT+RRSRMCV I+A+HK LLP G+ L+VSSS AT F+EPK AV
Sbjct: 223 KKISTKIFLAGGINKPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAV 282
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NNMEVR +NSE AEE AILS+LT+E+ ++REI +L+DR+LE+D+AFARA A W++G
Sbjct: 283 ELNNMEVRHANSEKAEEMAILSILTSEVVMAQREILHLLDRILELDIAFARASHANWING 342
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V P ++S+ + +++I+ +HPLLLGS L S P D+
Sbjct: 343 VYPNVTSEHTKTPGLAVDIDSAQHPLLLGSVLGS---------PNGGDI----------- 382
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
FPVP+DIKVE +VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLP
Sbjct: 383 -----FPVPVDIKVESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLP 437
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFDLILADIGD QSLEQ+LSTFSGHISRI IL++ S SLVL+DEI SGTDPSEGVALA
Sbjct: 438 WFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALA 497
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
TSILQY+++RV +AVV+THY DLS LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SN
Sbjct: 498 TSILQYIKNRVNVAVVSTHYGDLSRLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSN 557
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
AL +AKSIGF+++I++ A K E+L PE+ RK L+QSLMEER KL+ QA A+ H
Sbjct: 558 ALRVAKSIGFNKRILENAHKWTEKLNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHR 617
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
++M+LY E+E E+ DLD+R L KETQ+VQ++LN AK +++ +V +FE+QL AD+
Sbjct: 618 DLMNLYHELEHESHDLDKRERALLKKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQ 677
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
NSLI ++E A+A I+EA P D S+ E S ++PQ GE+V V LGDKL TVVE PG
Sbjct: 678 YNSLILKTEEAVAEIIEACCPMDPDSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPG 736
Query: 611 -DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
DDDTVLVQ+GK+RVR+KK +I+P+P S +N + R ++Q ++ GS E
Sbjct: 737 DDDDTVLVQHGKIRVRIKKKDIKPLPRSTSSQTSNRSLRSKRQINMKELGSVLQMQSEPV 796
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
R+QTSKN+LDLRGMR EEA HQLD+A++ +S S+LF+IHGMG G++KE VLE LR
Sbjct: 797 ---RIQTSKNTLDLRGMRAEEAVHQLDMAISGRDSGSILFIIHGMGAGIIKELVLERLRK 853
Query: 730 HPRVAKYEQESPMNYGCTVAYIK 752
+ RV++YEQ +PMN+GCTVAYIK
Sbjct: 854 NTRVSRYEQANPMNHGCTVAYIK 876
>gi|222629785|gb|EEE61917.1| hypothetical protein OsJ_16650 [Oryza sativa Japonica Group]
Length = 841
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/748 (55%), Positives = 566/748 (75%), Gaps = 22/748 (2%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y+PLL+++++C+FLTEL ++I FC+D L ++LDRAS+ L IR ER++N++ L+SLL+
Sbjct: 108 YTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDMLESLLRD 167
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ +IFQ GGID P++TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ A+
Sbjct: 168 TSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRL 227
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NNMEV+LS E AEE AIL LLT+ IA SE +I++LM ++LE+DLA AR +A W++ V
Sbjct: 228 NNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVR 287
Query: 193 PILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + +Q + + + S+ IEGI+HPLLL SL + E++ + G
Sbjct: 288 PAFTDRDSDTQLNPNSECSVFIEGIQHPLLLEQSLSMVK-------------ESTRVGKG 334
Query: 248 SLSKG--ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
LS +S P+P+D++V +TR++VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK
Sbjct: 335 QLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKG 394
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
PRLPWFD +LADIGDHQSLE +LSTFSGHISR+ I+++VS++SLVLIDEIGSGTDPS+
Sbjct: 395 TPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSD 454
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
GVAL+TSIL+YL R+ LA+VTTHYADLS LK D RFENAA EF LETL+PTY+ILWGS
Sbjct: 455 GVALSTSILKYLASRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCLETLQPTYQILWGS 514
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
TG+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++ER+ LESQA A
Sbjct: 515 TGNSNALSIAKSIGFDQKVLARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEA 574
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
AS+ +++ LY EI EA DLD R A L+A E+++VQQEL F K Q+D ++++FE+QL++
Sbjct: 575 ASVLSDVERLYNEIRSEADDLDSRVAALRATESEKVQQELKFVKSQMDQIIKNFESQLKN 634
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLAT 604
+ ++ NSL++++E+A A++ H+P D E N SS+ P+ G++V+V+ L G +A+
Sbjct: 635 SELEQYNSLMRKAEAATASLAATHQPTDFTFGDEENESSYVPEIGDKVYVEGLGGGSMAS 694
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
VVE G+D + +VQYGK++VRVK N I+ + + +A+ +P K + ++S + +
Sbjct: 695 VVETLGEDGSCMVQYGKIKVRVKGNKIKLVQRGTKDTSAS-SPVKGKGRTPKRSAAEANQ 753
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
+ S+GP VQTSKN++DLRGMRV EASH+L +A+ S VLFV+HGMGTG VKE L
Sbjct: 754 DGNVSFGPVVQTSKNTVDLRGMRVAEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECAL 813
Query: 725 EILRNHPRVAKYEQESPMNYGCTVAYIK 752
ILRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 814 GILRNHPRVAKFEDESPLNYGCTVAYIE 841
>gi|242074804|ref|XP_002447338.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
gi|241938521|gb|EES11666.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
Length = 912
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/758 (56%), Positives = 567/758 (74%), Gaps = 43/758 (5%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
RYS L+++L+ C+FLTEL ++I FC+D L ++LDRAS+ LE+IR ER+RN+E L+SLLK
Sbjct: 181 RYSSLVDILQGCDFLTELVQRIEFCLDSTLSLVLDRASKKLEIIRRERRRNIEMLESLLK 240
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
AA+IFQAGGID PL+TKRRSRMCVG+KASHK+L+P GI L+ S SGATYF+EP+ AVE
Sbjct: 241 DTAAKIFQAGGIDSPLVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFVEPRDAVE 300
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN EV+LS E AEE AILSLLT+ IA S+ +I+ LMD+VLE+DLA AR +A+W +GV
Sbjct: 301 LNNREVKLSGDERAEELAILSLLTSMIADSQLKIRNLMDKVLELDLACARGSYARWTNGV 360
Query: 192 CPILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P S SQS D S+ IEGI+HPLLL E S M
Sbjct: 361 KPTFSDSYTISQSDQCTDYSVYIEGIRHPLLL---------------------EQSLMAE 399
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
S ++ S+ PVP+D+ V+ R+VVI+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK
Sbjct: 400 ESTTRA-SEMPVPLDMWVKKHARIVVISGPNTGGKTATMKTLGLSSLMSKAGMFFPAKGS 458
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
PR+PWFD +LADIGDHQSLE +LSTFSGHISR+ I+E+VS++SLVLIDEIGSGTDPSEG
Sbjct: 459 PRIPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVEIVSKDSLVLIDEIGSGTDPSEG 518
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
VAL+TSIL+YL +V LA+VTTHYADLS L+ D RFENAA EF +ETL+PTYRILWGST
Sbjct: 519 VALSTSILKYLASKVNLAIVTTHYADLSRLQSVDNRFENAAMEFCVETLQPTYRILWGST 578
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++E++ LESQA AA
Sbjct: 579 GNSNALSIAKSIGFDQKVLDRAQEWVEKLLPDKQKERQGLLYDSLLDEKKLLESQANEAA 638
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
S+ +++ LY EI EA DL+ R A L+A+ETQ+VQQEL K Q+DT++++FE QL+++
Sbjct: 639 SVLSQVEGLYNEIRLEADDLESRVAGLRARETQKVQQELKVVKSQMDTIIKNFEAQLKNS 698
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLATV 605
++ NSL++++E+A A++V AH+P++ + N SSF PQ G++V+++ L G +ATV
Sbjct: 699 KLEQYNSLMRKAEAATASVVAAHQPNEITFDDDENQSSFVPQIGDKVYIQGLGGGTMATV 758
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPN----SKRKNAANPAPRLRK---QQE 654
VE G+D++ +VQYGK++VRVK+N I R I N S A P+ R +
Sbjct: 759 VETFGEDESCMVQYGKIKVRVKRNKIKLVQRGINNEATTSSSVKAKGRTPKQRSATTAEA 818
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGM 714
DR GS S+GP VQTSKN++DLRG RV EA+++L +A+ + VLFV+HGM
Sbjct: 819 DRNQDGGGS----ISFGPVVQTSKNTVDLRGKRVSEAAYELQMAIDACRTYQVLFVVHGM 874
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
GTG VKER +++LRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 875 GTGAVKERAIDVLRNHPRVAKFEDESPLNYGCTVAYIQ 912
>gi|32487407|emb|CAE05741.1| OSJNBb0017I01.21 [Oryza sativa Japonica Group]
Length = 921
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/748 (55%), Positives = 566/748 (75%), Gaps = 22/748 (2%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y+PLL+++++C+FLTEL ++I FC+D L ++LDRAS+ L IR ER++N++ L+SLL+
Sbjct: 188 YTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDMLESLLRD 247
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ +IFQ GGID P++TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ A+
Sbjct: 248 TSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRL 307
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NNMEV+LS E AEE AIL LLT+ IA SE +I++LM ++LE+DLA AR +A W++ V
Sbjct: 308 NNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVR 367
Query: 193 PILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + +Q + + + S+ IEGI+HPLLL SL + E++ + G
Sbjct: 368 PAFTDRDSDTQLNPNSECSVFIEGIQHPLLLEQSLSMVK-------------ESTRVGKG 414
Query: 248 SLSKG--ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
LS +S P+P+D++V +TR++VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK
Sbjct: 415 QLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKG 474
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
PRLPWFD +LADIGDHQSLE +LSTFSGHISR+ I+++VS++SLVLIDEIGSGTDPS+
Sbjct: 475 TPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSD 534
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
GVAL+TSIL+YL R+ LA+VTTHYADLS LK D RFENAA EF LETL+PTY+ILWGS
Sbjct: 535 GVALSTSILKYLASRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCLETLQPTYQILWGS 594
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
TG+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++ER+ LESQA A
Sbjct: 595 TGNSNALSIAKSIGFDQKVLARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEA 654
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
AS+ +++ LY EI EA DLD R A L+A E+++VQQEL F K Q+D ++++FE+QL++
Sbjct: 655 ASVLSDVERLYNEIRSEADDLDSRVAALRATESEKVQQELKFVKSQMDQIIKNFESQLKN 714
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLAT 604
+ ++ NSL++++E+A A++ H+P D E N SS+ P+ G++V+V+ L G +A+
Sbjct: 715 SELEQYNSLMRKAEAATASLAATHQPTDFTFGDEENESSYVPEIGDKVYVEGLGGGSMAS 774
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
VVE G+D + +VQYGK++VRVK N I+ + + +A+ +P K + ++S + +
Sbjct: 775 VVETLGEDGSCMVQYGKIKVRVKGNKIKLVQRGTKDTSAS-SPVKGKGRTPKRSAAEANQ 833
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
+ S+GP VQTSKN++DLRGMRV EASH+L +A+ S VLFV+HGMGTG VKE L
Sbjct: 834 DGNVSFGPVVQTSKNTVDLRGMRVAEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECAL 893
Query: 725 EILRNHPRVAKYEQESPMNYGCTVAYIK 752
ILRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 894 GILRNHPRVAKFEDESPLNYGCTVAYIE 921
>gi|218195837|gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
Length = 916
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/746 (54%), Positives = 566/746 (75%), Gaps = 18/746 (2%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y+PLL+++++C+FLTEL ++I FC+D L ++LDRAS+ L IR ER++N++ L+SLL+
Sbjct: 183 YTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDMLESLLRD 242
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ +IFQ GGID P++TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ A+
Sbjct: 243 TSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRL 302
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NNMEV+LS E AEE AIL LLT+ IA SE +I++LM ++LE+DLA AR +A W++ V
Sbjct: 303 NNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVR 362
Query: 193 PILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + +Q + + + S+ IEGI+HPLLL +SLS ++ K + + +
Sbjct: 363 PAFTDRDSDTQLNPNSECSVFIEGIQHPLLLE---QSLSMVKESTGVGKGQLSDEHL--- 416
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
+S P+P+D++V +TR++VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK P
Sbjct: 417 -----VSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTP 471
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
RLPWFD +LADIGDHQSLE +LSTFSGHISR+ I+++VS++SLVLIDEIGSGTDPS+GV
Sbjct: 472 RLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGV 531
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
AL+TSIL+YL R+ LA+VTTHYADLS LK D RFENAA EF LETL+PTY+ILWGSTG
Sbjct: 532 ALSTSILKYLASRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTG 591
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++ER+ LESQA AAS
Sbjct: 592 NSNALSIAKSIGFDQKVLARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEAAS 651
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ +++ LY EI EA DLD R A L+A E+++VQQEL F K Q+D ++++FE+QL+++
Sbjct: 652 VVSDVERLYNEIRSEADDLDSRVAALRATESEKVQQELKFVKSQMDQIIKNFESQLKNSE 711
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVV 606
++ NSL++++E+A A++ H+P D E N SS+ P+ G++V+V+ L G +A+VV
Sbjct: 712 LEQYNSLMRKAEAATASLAATHQPTDFTFGDEENESSYVPEIGDKVYVEGLGGGSMASVV 771
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
E G+D + +VQYGK++VRVK N I+ + + +A+ +P K + ++S + + +
Sbjct: 772 ETLGEDGSCMVQYGKIKVRVKGNKIKLVQRGTKDTSAS-SPVKGKGRTPKRSAAEANQDG 830
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 726
S+GP VQTSKN++DLRGMRV EASH+L +A+ S VLFV+HGMGTG VKE L I
Sbjct: 831 NVSFGPVVQTSKNTVDLRGMRVAEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECALGI 890
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYIK 752
LRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 891 LRNHPRVAKFEDESPLNYGCTVAYIE 916
>gi|357162691|ref|XP_003579491.1| PREDICTED: mutS2 protein-like [Brachypodium distachyon]
Length = 927
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/755 (55%), Positives = 560/755 (74%), Gaps = 34/755 (4%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
RYSPLL++L++C+FLTEL + I FC+D L ++LDRASE L IR ER+ N+E L+SLL+
Sbjct: 193 RYSPLLDILQDCDFLTELVQMIEFCLDSNLSMVLDRASEKLGTIRKERRSNIEILESLLR 252
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ +IFQAGG+D PL+TKRRSRMCVG+KASHK+LLP GI L+ S SGATYFMEP+ AV+
Sbjct: 253 DASMKIFQAGGVDSPLVTKRRSRMCVGVKASHKHLLPGGIVLSSSGSGATYFMEPRDAVK 312
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NNMEV+LS+ E EE A+L LLT+ IA S +I++LM +++E+DLA AR +A W++GV
Sbjct: 313 LNNMEVKLSSDERTEELAVLGLLTSRIADSRMKIRHLMGKIMELDLACARGSYALWINGV 372
Query: 192 CPILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P S Q S D S+ I+GI+HPLLL S ++ S+ E+
Sbjct: 373 RPAFSDRDNSGQLDPSSDFSVFIDGIQHPLLLEQSF-GIAKGST------------EVGK 419
Query: 247 GSLSK--GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
G LS+ +S PVP+D+ V+ +TR+VVI+GPNTGGKTA+MKTLGLA+LMSKAG++ PAK
Sbjct: 420 GQLSEEHPVSSMPVPLDMHVKSDTRIVVISGPNTGGKTATMKTLGLATLMSKAGMFFPAK 479
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
P+LPWFD +LADIGDHQSLE +LSTFSG+ISR+ I+++VSR+SLVLIDEIGSGTDPS
Sbjct: 480 GSPKLPWFDQVLADIGDHQSLENSLSTFSGNISRLRKIVQVVSRDSLVLIDEIGSGTDPS 539
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EGV+L+TSIL+YL R+ LA+VTTHYADLS LK D RFENAA EF LETL+PTYRILWG
Sbjct: 540 EGVSLSTSILKYLAGRLNLAIVTTHYADLSRLKAVDGRFENAAMEFCLETLKPTYRILWG 599
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
STG+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++ER LESQA
Sbjct: 600 STGNSNALSIAKSIGFDQKVLDRAQEWVEKLLPDKQKERQGLLYGSLLDERNLLESQANE 659
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AS+ +E+ LY EI EA DLD R A L+A+E+Q+VQ EL K Q+D ++++FE QL+
Sbjct: 660 VASVLSEVEVLYNEICLEADDLDNRVAALRARESQKVQHELKLVKSQMDLIIRNFEVQLK 719
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLA 603
++ ++ NS++K++E++ A++ AH+P + + N SS+ PQ G++V+V+ L G LA
Sbjct: 720 NSKLEQYNSVMKKAEASTASLAAAHQPTEFAFSDDENKSSYVPQIGDKVYVEGLGGGSLA 779
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA------PRLRKQQEDRQ 657
TVVE+ +D + +VQYGK++VR K N ++ ++ +A+ + P R E +Q
Sbjct: 780 TVVEILSEDGSCMVQYGKIKVRAKNNKMKLAQRDTKETSASSSVQGKGRPVKRSSPETKQ 839
Query: 658 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTG 717
GS S+GP VQTSKN++DLRGMRV EASH+L +A+ S VLFV+HGMGTG
Sbjct: 840 DGS-------ISFGPVVQTSKNTVDLRGMRVSEASHELQMAIDGCRSYQVLFVVHGMGTG 892
Query: 718 VVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
VKE L+ILR+HPRVAK E ESP+NYGCTVAYI+
Sbjct: 893 AVKECALDILRSHPRVAKLEDESPLNYGCTVAYIE 927
>gi|90399000|emb|CAJ86270.1| H0901F07.7 [Oryza sativa Indica Group]
Length = 889
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/746 (54%), Positives = 551/746 (73%), Gaps = 45/746 (6%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y+PLL+++++C+FLTEL ++I FC+D L ++LDRAS+ L IR ER++N++ L+SLL+
Sbjct: 183 YTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDMLESLLRD 242
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ +IFQ GGID P++TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ A+
Sbjct: 243 TSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRL 302
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NNMEV+LS E AEE AIL LLT+ IA SE +I++LM ++LE+DLA AR +A W++ V
Sbjct: 303 NNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVR 362
Query: 193 PILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + +Q + + + S+ IEGI+HPLLL +SLS ++ K + + +
Sbjct: 363 PAFTDRDSDTQLNPNSECSVFIEGIQHPLLLE---QSLSMVKESTGVGKGQLSDEHL--- 416
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
+S P+P+D++V +TR++VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK P
Sbjct: 417 -----VSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTP 471
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
RLPWFD +LADIGDHQSLE +LSTFSGHISR+ I+++VS++SLVLIDEIGSGTDPS+GV
Sbjct: 472 RLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGV 531
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
AL+TSIL+YL R+ LA+VTTHYADLS LK D RFENAA EF LETL+PTY+ILWGSTG
Sbjct: 532 ALSTSILKYLASRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTG 591
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++ER+ LESQA AAS
Sbjct: 592 NSNALSIAKSIGFDQKVLARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEAAS 651
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ +++ LY EI EA DLD R A L+A E+++VQQEL F K Q+D ++++FE+QL+++
Sbjct: 652 VVSDVERLYNEIRSEADDLDSRVAALRATESEKVQQELKFVKSQMDQIIKNFESQLKNSE 711
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVV 606
++ NSL++++E+A A++ H+P D E N SS+ P+ G++V+V+ L G +A+VV
Sbjct: 712 LEQYNSLMRKAEAATASLAATHQPTDFTFGDEENESSYVPEIGDKVYVEGLGGGSMASVV 771
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
E G+D + +VQYGK++ R K R E Q G+
Sbjct: 772 ETLGEDGSCMVQYGKIKGRTPK---------------------RSAAEANQDGN------ 804
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 726
S+GP VQTSKN++DLRGMRV EASH+L +A+ S VLFV+HGMGTG VKE L I
Sbjct: 805 -VSFGPVVQTSKNTVDLRGMRVAEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECALGI 863
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYIK 752
LRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 864 LRNHPRVAKFEDESPLNYGCTVAYIE 889
>gi|414584744|tpg|DAA35315.1| TPA: hypothetical protein ZEAMMB73_219783 [Zea mays]
Length = 901
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/748 (55%), Positives = 555/748 (74%), Gaps = 32/748 (4%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
RYS L+++L+ C+FLTEL ++I FC+D L ++LDRAS+ LE+IR ER+RN+E L+SLLK
Sbjct: 179 RYSSLVDILQGCDFLTELVQRIEFCLDSTLSLVLDRASKKLEIIRRERRRNIEMLESLLK 238
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
AA+IF AGGID PL+TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ AVE
Sbjct: 239 DTAAKIFLAGGIDNPLVTKRRSRMCVGVKASHKHLMPGGIVLSSSGSGATYFMEPQDAVE 298
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN EV+LS E AEE +LSLLT+ IA S+ +I+ LMD VLE+DLA AR +A W + V
Sbjct: 299 LNNREVKLSGEERAEELVVLSLLTSMIADSQLKIRNLMDNVLELDLACARGSYALWTNSV 358
Query: 192 CPILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P + SQS D SI IEGI+HPLLL SL + +S E SEM
Sbjct: 359 RPTFTDSYTISQSDQCNDYSIYIEGIRHPLLLEQSLMAE----------ESTTEASEM-- 406
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
PVP+D+ V+ R+VVI+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK
Sbjct: 407 ----------PVPLDMWVKKNARIVVISGPNTGGKTATMKTLGLSSLMSKAGIFFPAKGR 456
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
PR+PWFD +LADIGDHQSLE +LSTFSGHISR+ I+E+VS++SLVLIDEIGSGTDP+EG
Sbjct: 457 PRIPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVEMVSKDSLVLIDEIGSGTDPAEG 516
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
VAL+TSIL+YL RV LA+VTTHYADLS L+ D RFENAA EF +ETL+PTYRILWGST
Sbjct: 517 VALSTSILKYLASRVNLAIVTTHYADLSRLQSVDNRFENAAMEFCVETLQPTYRILWGST 576
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G+SNAL+IAKSIGFD+K++ RAQ+ VE+L P++Q+ R+ LY SL++E+ LESQA AA
Sbjct: 577 GNSNALSIAKSIGFDQKVLDRAQEWVEKLLPDKQKERQGLLYDSLVDEKELLESQANEAA 636
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
S+ +++ LY EI EA DL+ R A L+A+ETQ+VQQEL K ++DT++++FE QL+++
Sbjct: 637 SVLSQVEGLYNEIRLEADDLESRVAALRARETQKVQQELKVVKYRMDTIIKNFEAQLKNS 696
Query: 547 SADEINSLIKESESAIAAIVEAHRPDD-DFSVSETNTSSFTPQFGEQVHVKSL-GDKLAT 604
++ NSL++++E+A A++V AH+P + F + N SF Q G++V+V+ L G+ +AT
Sbjct: 697 KLEQYNSLMRKAEAATASVVAAHQPSEIAFDDDDENRISFVSQVGDKVYVQGLGGETMAT 756
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
VVE G+D++ +VQYGK++VRVK++ I+ + A + K + +Q ++
Sbjct: 757 VVETLGEDESCMVQYGKIKVRVKRSRIKLVQRGTNNEATTSSSVKAKGRTPKQR---SAT 813
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
+ S+GP VQTSKN++DLRG RV EA+ +L +A+ VLFV+HGMGTG VK+ +
Sbjct: 814 TTDVSFGPVVQTSKNTVDLRGKRVSEAAFELRMAVDACRPYQVLFVVHGMGTGAVKDCAI 873
Query: 725 EILRNHPRVAKYEQESPMNYGCTVAYIK 752
++LR HPRVA++E ESP+NYGCTVAYI+
Sbjct: 874 DVLRKHPRVARFEDESPLNYGCTVAYIQ 901
>gi|15217840|ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|332196204|gb|AEE34325.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 857
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/643 (58%), Positives = 491/643 (76%), Gaps = 27/643 (4%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
+R +PL+++L+ C+F L++KI FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLL
Sbjct: 163 NRVTPLVDILQGCDFKDTLQQKISFCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLL 222
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
KK++ +IF AGGI+KPLIT+RRSRMCV I+A+HK LLP G+ L+VSSS AT F+EPK AV
Sbjct: 223 KKISTKIFLAGGINKPLITQRRSRMCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAV 282
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NNMEVR +NSE AEE AILS+LT+E+ ++REI +L+DR+LE+D+AFARA A W++G
Sbjct: 283 ELNNMEVRHANSEKAEEMAILSILTSEVVMAQREILHLLDRILELDIAFARASHANWING 342
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V P ++S+ + +++I+ +HPLLLGS L S P D+
Sbjct: 343 VYPNVTSEHTKTPGLAVDIDSAQHPLLLGSVLGS---------PNGGDI----------- 382
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
FPVP+DIKVE +VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLP
Sbjct: 383 -----FPVPVDIKVESSAKVVVISGPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLP 437
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFDLILADIGD QSLEQ+LSTFSGHISRI IL++ S SLVL+DEI SGTDPSEGVALA
Sbjct: 438 WFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALA 497
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
TSILQY+++RV +AVV+THY DLS LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SN
Sbjct: 498 TSILQYIKNRVNVAVVSTHYGDLSRLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSN 557
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
AL +AKSIGF+++I++ A K E+L PE+ RK L+QSLMEER KL+ QA A+ H
Sbjct: 558 ALRVAKSIGFNKRILENAHKWTEKLNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHR 617
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
++M+LY E+E E+ DLD+R L KETQ+VQ++LN AK +++ +V +FE+QL AD+
Sbjct: 618 DLMNLYHELEHESHDLDKRERALLKKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQ 677
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
NSLI ++E A+A I+EA P D S+ E S ++PQ GE+V V LGDKL TVVE PG
Sbjct: 678 YNSLILKTEEAVAEIIEACCPMDPDSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPG 736
Query: 611 -DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
DDDTVLVQ+GK+RVR+KK +I+P+P S +N + R ++Q
Sbjct: 737 DDDDTVLVQHGKIRVRIKKKDIKPLPRSTSSQTSNRSLRSKRQ 779
>gi|168030914|ref|XP_001767967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680809|gb|EDQ67242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 964
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 344/781 (44%), Positives = 488/781 (62%), Gaps = 54/781 (6%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 74
PL ++ CN +ELE I +C+DC ILDRAS L +R R+ N L+SL+K+ A
Sbjct: 195 PLQAVMLGCNLCSELESAIEYCLDCSRSTILDRASSKLASVRLMRQENSMALESLIKETA 254
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A +F AGG+D L+TKRR RMCV ++AS K LL G+ L+VS++GATYFMEP+ A+ FNN
Sbjct: 255 AMVFSAGGMDSQLVTKRRGRMCVAVRASQKGLLKGGVTLDVSNTGATYFMEPESAIHFNN 314
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
E++L+ E EE A+L LT + + ++ L++RV +DLA ARAG + W++G P+
Sbjct: 315 EEIQLAEEEKLEEIAVLRQLTFMLLDTSDDVIDLLERVTTLDLACARAGHSAWLNGARPV 374
Query: 195 L---------SSQSHVSFDSS--------INIEGIKHPLLLGSSL-------------RS 224
SS S + D++ ++I+G++HPLLLGS+L R
Sbjct: 375 FVNSMADSMSSSHSSSALDTTPAKEDLLLVDIKGVRHPLLLGSALESPVNSPRYGIYIRQ 434
Query: 225 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 284
+ +S+ LK VE+S + PVPIDI + +VV ITGPNTGGKTA+
Sbjct: 435 KEKSRRSSSGLKGAVESSNVD--------RMLPVPIDINIRTGVKVVTITGPNTGGKTAA 486
Query: 285 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 344
+KTLG+ +LM+KAGL LPA PRLPWFD ILADIGD QSLE+NLSTFSGHI R+ ILE
Sbjct: 487 LKTLGVVALMAKAGLCLPATGVPRLPWFDSILADIGDDQSLERNLSTFSGHIRRVRQILE 546
Query: 345 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 404
+ +SL+L+DEIG GTDPSEG ALAT+IL+ L V L + TTH A+L LKD D FE
Sbjct: 547 AGTAQSLILLDEIGGGTDPSEGAALATAILRNLAASVQLTLATTHCAELRTLKDHDPEFE 606
Query: 405 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 464
NA+ EF ++TLRPTYR+LWG G SNALNIA S+GFD +++ RA++LV +L P R
Sbjct: 607 NASVEFDVKTLRPTYRVLWGIAGQSNALNIAASLGFDSEVLTRARELVTKLVPASLGARS 666
Query: 465 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
+EL L+++R + ++ AAS A I LY +++ EA++L ++ A L+ + + ++
Sbjct: 667 TELMVPLVKQRNEQLERSAAAASALAIISKLYNKLQSEAENLAQKEAKLRRLQEEATNKK 726
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
+ A ++ ++ F+ + ++ ++++++AI A+VE H S++ +N +S
Sbjct: 727 VAHANASLEEILLKFQESAHQKAKEDEGFSMRDAQAAIIAVVEEHATKPVASIT-SNPAS 785
Query: 585 FTP-----------QFGEQVHVKSLGDKLATVVEVP-GDDDTVLVQYGKMRVRVKKNNIR 632
T + G++V +K LG AT+V++P ++D + VQ G M++RVK N I
Sbjct: 786 ITEPEGKEGEGEQLRVGDEVIIKRLGKLPATIVDIPQAENDYLTVQVGTMKMRVKLNEIL 845
Query: 633 P-IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
+ S + A P K ++ +S A + EE + VQTSKN+LDLRG RVEE+
Sbjct: 846 SRVARSAKGGARTPTE--NKMKQPARSSKAEAEPEEIKFDAAVQTSKNTLDLRGKRVEES 903
Query: 692 SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+LD+ALA SVLF++HGMGTG VKE VL LR HP VAK+EQES MN GCT+ YI
Sbjct: 904 LQELDLALAGRSRGSVLFIVHGMGTGAVKEAVLLRLRKHPYVAKFEQESVMNPGCTIVYI 963
Query: 752 K 752
K
Sbjct: 964 K 964
>gi|302758310|ref|XP_002962578.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
gi|300169439|gb|EFJ36041.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
Length = 825
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 329/746 (44%), Positives = 455/746 (60%), Gaps = 52/746 (6%)
Query: 14 SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
SPL +++ +EL E I C+D K I+LDRAS L +R +R+ NM L+SLLK+
Sbjct: 123 SPLQRIMQGLELCSELREDIDKCLDSKREIVLDRASTKLSQVRRQRQANMTELESLLKET 182
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
A + AGGID IT RR+R+CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ N
Sbjct: 183 ARMVIDAGGIDSMTITTRRARLCVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLN 242
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N+E++LS +E AEE AI L + +A S I ++ + +DLA ARA A+W+ V P
Sbjct: 243 NLEIQLSAAERAEEVAICRRLASRVAASAASILEQLNAITLVDLACARAKHAKWLGAVKP 302
Query: 194 -ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
S+S + IE I+HPLLL ++L KG
Sbjct: 303 AFFESKSE---SKGVIIEEIRHPLLLETALE---------------------------KG 332
Query: 253 IS--DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
+ +FPVPIDIKV ++V+I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLP
Sbjct: 333 LDRDNFPVPIDIKVRDGVKIVIISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLP 392
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFD I AD+GD QSLEQNLSTFSGH+ R+ I E +SLVLIDEIG GTDP+EG +LA
Sbjct: 393 WFDRIFADVGDSQSLEQNLSTFSGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLA 452
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
T++L+Y V L +VTTH A L L D+D FENA+ EF LETLRPTYR+LWG G
Sbjct: 453 TAVLKYFAKTVHLCIVTTHSASLKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQ 512
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNALNIAKS+ FD I+ RA + +L P + R+S+L LM++ + E A TAA
Sbjct: 513 SNALNIAKSLQFDSDILSRASYWLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVY 572
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
++I L+ EI E DLD+R K +E + + + AK +++ V+ ++ L + S
Sbjct: 573 LSDIETLHNEIAFEVDDLDKRKIAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSG 632
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVV 606
++ ++ +I IV + F + ++S+ P GE+V ++ LG K ATV+
Sbjct: 633 GGKAFTLRTAQDSITTIVNDY---GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVL 689
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
E D ++VQ G M++RVK + S K A PAP L + S
Sbjct: 690 EPADDSGHLMVQLGTMKMRVKTTELMLTAQGSPVKQAKKPAPFLPE-----------SGT 738
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLE 725
E +GP +QTSKN++DLRGM VE+A + + +A E SVLF+IHG+GTG +K+ V+
Sbjct: 739 TELKFGPAIQTSKNTVDLRGMTVEDAIQVVRMVIAEREPGSVLFIIHGVGTGALKQAVIS 798
Query: 726 ILRNHPRVAKYEQESPMNYGCTVAYI 751
ILR HP VAK+E ES +N GCTVAY+
Sbjct: 799 ILRKHPNVAKFEDESFVNGGCTVAYV 824
>gi|302824584|ref|XP_002993934.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
gi|300138206|gb|EFJ04981.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
Length = 825
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 328/746 (43%), Positives = 455/746 (60%), Gaps = 52/746 (6%)
Query: 14 SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
SPL +++ +EL E I C+D K I+LDRAS L +R +R+ NM LD LLK+
Sbjct: 123 SPLQRIMQGLELCSELREDIDKCLDSKREIVLDRASTKLSQVRRQRQANMTELDILLKET 182
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
A + AGGID IT RR+R+CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ N
Sbjct: 183 ARMVIDAGGIDSMTITTRRARLCVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLN 242
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N+E++LS +E AEE AI L + +A S I ++ ++ +DLA ARA A+W+ V P
Sbjct: 243 NLEIQLSAAERAEEVAICRRLASRVAASAASILEQLNAIMLLDLACARAKHAKWLGAVKP 302
Query: 194 -ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
S+S + IE I+HPLLL ++L KG
Sbjct: 303 AFFESKSE---SKGVIIEEIRHPLLLETALE---------------------------KG 332
Query: 253 IS--DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
+ +FPVPIDIKV ++V+I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLP
Sbjct: 333 LDRDNFPVPIDIKVRDGVKIVIISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLP 392
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFD I AD+GD QSLEQNLSTFSGH+ R+ I E +SLVLIDEIG GTDP+EG +LA
Sbjct: 393 WFDRIFADVGDSQSLEQNLSTFSGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLA 452
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
T++L+Y V L +VTTH A L L D+D FENA+ EF LETLRPTYR+LWG G
Sbjct: 453 TAVLKYFAKTVHLCIVTTHSASLKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQ 512
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA+NIAKS+ FD I+ RA + +L P + R+S+L LM++ + E A TAA
Sbjct: 513 SNAVNIAKSLQFDSDILSRASYWLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVY 572
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
++I L+ EI E DLD+R K +E + + + AK +++ V+ ++ L + S
Sbjct: 573 LSDIETLHNEIAFEVDDLDKRKIAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSG 632
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVV 606
++ ++ +I IV + F + ++S+ P GE+V ++ LG K ATV+
Sbjct: 633 GGKAFTLRTAQDSITTIVNDY---GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVL 689
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
E D ++VQ G M++RVK + S K A PAP L + S
Sbjct: 690 EPADDSGHLMVQLGTMKMRVKTTELMLTAQGSPVKQAKKPAPFLPE-----------SGT 738
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLE 725
E +GP +QTSKN++DLRGM VE+A + + +A E SVLF+IHG+GTG +K+ V+
Sbjct: 739 TELKFGPAIQTSKNTVDLRGMTVEDAIQVVRMVIAEREPGSVLFIIHGVGTGALKQAVIS 798
Query: 726 ILRNHPRVAKYEQESPMNYGCTVAYI 751
ILR HP VAK+E ES +N GCTVAY+
Sbjct: 799 ILRKHPNVAKFEDESFVNGGCTVAYV 824
>gi|428776360|ref|YP_007168147.1| MutS2 family protein [Halothece sp. PCC 7418]
gi|428690639|gb|AFZ43933.1| MutS2 family protein [Halothece sp. PCC 7418]
Length = 812
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 270/762 (35%), Positives = 412/762 (54%), Gaps = 87/762 (11%)
Query: 14 SPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
SP L EL+ ELE++I C+D K + +RAS L IR K + + L+
Sbjct: 114 SPRLKELISQIRTYPELEKEINRCLDDKGKVT-ERASPKLGEIRQNLKERRDRIYQKLQN 172
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ Q Q+G I +P+IT+R R + +KA HK + GI + S SGAT ++EP VE
Sbjct: 173 IMQQ--QSGAIQEPVITQRGERFVLPVKAGHKESI-RGIVHDSSGSGATLYIEPNSIVEL 229
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N + + E EE IL LT E+A+ + +++ L+ ++DLA AR+ ++ W++
Sbjct: 230 GNQQRQYLRQEKREEERILQALTEEVAEVKEDLELLLAIATKLDLATARSRYSLWLEANP 289
Query: 193 P-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + S S I + ++HPLL+ P+
Sbjct: 290 PQFVESNSR----EPITLRRLRHPLLV------WQHHHEQGTPV---------------- 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPID++++ ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK +PW
Sbjct: 324 ------VPIDVQIDPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFIPAKEPVEIPW 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------------------RESLVL 353
F+ +LADIGD QS+EQ+LSTFSGHI RI I++ + + SLVL
Sbjct: 378 FEQVLADIGDEQSIEQSLSTFSGHIRRITRIIDALHPSSIDHPEANEDADGETIKLSLVL 437
Query: 354 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 413
+DE+G+GTDP+EG A+A ++LQYL RV L + TTHY +L LK +D RFENA+ EF E
Sbjct: 438 LDEVGAGTDPAEGSAIAIALLQYLAARVRLTIATTHYGELKALKYQDERFENASVEFDDE 497
Query: 414 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 473
TL PTYR+LWG G SNAL IA+ +G D +I+ A+ + + Q + L +
Sbjct: 498 TLSPTYRLLWGIPGRSNALTIARRLGLDPEILDLAKNKMGGYSEDINQ-----VISGLEK 552
Query: 474 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
+RR+ E +AR A L + Y+E+ AK L+ R A LK + Q V + ++ A+ +I
Sbjct: 553 QRREQEEKAREARQLLEQAEKFYQEVSSRAKALEAREADLKRSQEQAVNEAVSEARQEIA 612
Query: 534 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 593
V++ + + A +++ + + I HRP + + + PQ GEQV
Sbjct: 613 QVIKQLQQGQKTGQA------AQKATATVNEIAGRHRPQPE---TPKPKPQYQPQVGEQV 663
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
+ ++ V+ P + + +++G M++ V +I + K P L ++Q
Sbjct: 664 RLPKF-NQTGEVLTAPNAEGKLTIRFGLMKMTVSLADIESLDGKK--------PELPQKQ 714
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHG 713
Q S + + AS P V+T N+LD+RG RV +A QL+ + ++R L+VIHG
Sbjct: 715 ---QKASTSTPKKSASEAPTVRTESNTLDIRGYRVAQAESQLENTIRS-QNRGALWVIHG 770
Query: 714 MGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 752
GTG +++ V E L+ HP+V +YE +P N G TVAY+K
Sbjct: 771 KGTGKLRQGVQEFLKQHPQVERYET-APQNEGGSGVTVAYLK 811
>gi|359461621|ref|ZP_09250184.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris sp. CCMEE 5410]
Length = 794
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/748 (35%), Positives = 424/748 (56%), Gaps = 69/748 (9%)
Query: 9 IFHRYSPLL---ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN 65
+ +RY L+ +L+ + ELE++I CID + + DRASE L +IR ER+R + N
Sbjct: 107 LINRYPELVSLNQLVADLRTYPELEQEIRHCIDEQGEVA-DRASEKLMVIR-ERQRQVRN 164
Query: 66 -LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
+ ++L+++ + + + + LIT+R R V +KA K +P GI + S+SGAT ++
Sbjct: 165 DVQTILQRILQR--KGAALQERLITQRSDRFVVPVKAPQKDAVP-GIVHDASTSGATLYI 221
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EPK VE NN +L+ E AE AI LT ++A+ + ++ L+ V +DLA ARA +
Sbjct: 222 EPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVQEDLDALLQIVTAVDLATARARY 281
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
+ W+ P +++ ++ + ++HPLL+ + + E+
Sbjct: 282 SYWLGANRPQFVNRAA----ETLTLRRLRHPLLVWQ---------------QHHEQGPEV 322
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
V ID+ ++ E RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+
Sbjct: 323 -------------VAIDVTIQPEIRVVAITGPNTGGKTVTLKTLGLATLMAKVGLFVPAQ 369
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I+ ++ +SLVL+DE+G+GTDP
Sbjct: 370 EPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEIIAALTDQSLVLLDEVGAGTDPL 429
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA ++L+YL D+ L + TTH+ +L LK D RFENA+ EF TL+PTYR+LWG
Sbjct: 430 EGSALAIALLRYLADQAQLTIATTHFGELKALKYTDARFENASVEFDDATLQPTYRLLWG 489
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNAL IA+ +G + ++I AQ L + + + +++ L ERR+ E++A+
Sbjct: 490 IPGRSNALIIAQRLGLNEQVI--AQALAQM---DGETDDVNQVIAGLETERRQQETRAQA 544
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AA L L++++ +A DL R L+ ++ + +Q+E+ AK I V++D + Q +
Sbjct: 545 AAKLLQSTEQLHQQVAKKASDLKVREQKLRQQQEKAIQEEIRRAKQAIAQVIRDLQQQPK 604
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
A A ++ + E IA + R + F PQ G++V + S+G K
Sbjct: 605 SAPAAQVAT---ERLEKIA----SQRLPSRTKPKAPPPTGFQPQVGDRVRIPSIGQKADV 657
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ P ++ ++VQ+G M++ VK + + K P P+ S
Sbjct: 658 IKITPTNE--LVVQFGMMKMTVKPTEVESLTGEK----VTPPPK------KTDSAPKKED 705
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
N + V+TSKN+LD+RG RV +A ++ A+A +++ L++IHG GTG +++ V
Sbjct: 706 NTPNNSALMVRTSKNTLDIRGSRVADAEVVIEDAIA--KAQGPLWIIHGHGTGKLRQGVQ 763
Query: 725 EILRNHPRVAKYE--QESPMNYGCTVAY 750
L HP V++YE +++ G T+AY
Sbjct: 764 TYLSQHPLVSRYEFAEQADGGKGVTIAY 791
>gi|158336591|ref|YP_001517765.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris marina MBIC11017]
gi|158306832|gb|ABW28449.1| MutS2 family protein [Acaryochloris marina MBIC11017]
Length = 794
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/748 (35%), Positives = 423/748 (56%), Gaps = 70/748 (9%)
Query: 8 NIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-L 66
N + + L +L+ + ELE++I CID + + DRASE L IR ER+R + N +
Sbjct: 109 NRYPELTSLNQLVADLRTYPELEQEIRHCIDEQGEVA-DRASEKLMGIR-ERQRQVRNDV 166
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
++L+++ + + + + LIT+R +R V +KA K +P GI + S+SGAT ++EP
Sbjct: 167 QTILQRILQR--KGAALQERLITQRSNRFVVPVKAPQKDAVP-GIVHDASTSGATLYIEP 223
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
K VE NN +L+ E AE AI LT ++A+ ++ L+ V +DLA ARA ++
Sbjct: 224 KATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVHEDLDALLQIVTLVDLATARARYSY 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
W++ P +++ ++ + ++HPLL+ + + E+
Sbjct: 284 WLEANRPRFVNRAA----DTLTLRRLRHPLLVWQ---------------QQHEQGPEV-- 322
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V ID+ ++ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+
Sbjct: 323 -----------VAIDVTIQPQIRVVAITGPNTGGKTVTLKTLGLATLMAKVGLFVPAQEP 371
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I+ ++ +SLVL+DE+G+GTDP EG
Sbjct: 372 VELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEIIAALTDQSLVLLDEVGAGTDPLEG 431
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA ++L+YL D+ L + TTH+ +L LK D RFENA+ EF TL+PTYR+LWG
Sbjct: 432 SALAIALLRYLADQAQLTIATTHFGELKALKYTDNRFENASVEFDDATLQPTYRLLWGIP 491
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNAL IA+ +G + ++I +AQ + + + +++ L ERR+ E++A+ AA
Sbjct: 492 GRSNALIIAQRLGLNEQVIAQAQAQM-----DGETDDVNQVIAGLETERRQQETKAQAAA 546
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L L+ ++ +A DL R L+ ++ + +Q+E+ AK I V++D + Q + A
Sbjct: 547 QLLQSTEQLHEQVAKKASDLKVREQKLRQQQEKAIQEEIRRAKQAIAQVIRDLQQQPKSA 606
Query: 547 SADEINS--LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
A ++ + L K + + + + P F PQ G++V + S+G K
Sbjct: 607 PAAQVATERLEKIANQRLPSRTKPKAPP---------PKGFQPQVGDRVRIPSIGQKADV 657
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ P ++ ++V++G M++ VK I + K P P+ S
Sbjct: 658 IKITPTNE--LVVKFGMMKMTVKPTEIESLTGEK----VAPPPK------KTDSAPKKGD 705
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
N + P V+TSKN+LD+RG RV +A ++ A+A +++ L++IHG GTG +++ V
Sbjct: 706 NTPKNSAPMVRTSKNTLDIRGSRVADAEVVIEDAIA--KAQGPLWIIHGHGTGKLRQGVQ 763
Query: 725 EILRNHPRVAKYE--QESPMNYGCTVAY 750
L HP V++YE +++ G T+AY
Sbjct: 764 AYLSQHPLVSRYEFAEQADGGKGVTIAY 791
>gi|440751890|ref|ZP_20931093.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
gi|440176383|gb|ELP55656.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
Length = 789
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSERWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSLEQ+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLEQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSAEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ D + +++G M++ + + I + K + A PA L + Q
Sbjct: 656 SPESDEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++TS N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTSNNTVDIRGSRVAESETDIEQAIIRATQSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP+V ++ Q +P N G T+AY+
Sbjct: 764 RHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|166365089|ref|YP_001657362.1| recombination and DNA strand exchange inhibitor protein
[Microcystis aeruginosa NIES-843]
gi|166087462|dbj|BAG02170.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 789
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 265/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRQEQIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDHVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ D + +++G M++ + + I + K + A PA L + Q
Sbjct: 656 SPESDEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTANNTVDIRGSRVAESETDIEQAITRATPSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP+V ++ Q +P N G T+AY+
Sbjct: 764 RHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|422303606|ref|ZP_16390957.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
gi|389791362|emb|CCI12788.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
Length = 789
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/742 (35%), Positives = 405/742 (54%), Gaps = 76/742 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ E+E++I CID I DRAS L IR + K E + L+ +
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIKERIYRKLQDIMQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+ N
Sbjct: 176 K--QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G P
Sbjct: 233 LRQYRRQEQIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-- 290
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ +I + ++HPLL K + E+
Sbjct: 291 ---HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV----------- 321
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPI++++ E RVV ITGPNTGGKT ++KTLGLA++M+KAGL++PA+ +PWFD +
Sbjct: 322 --VPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAAVMAKAGLFIPAREPVEIPWFDQV 379
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA +ILQ
Sbjct: 380 LADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQ 439
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
YL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNAL IA
Sbjct: 440 YLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIA 499
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G + +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 500 QRLGLNPEIVTEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQTEKF 554
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEIN 552
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 555 YTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQAGTKTGRDA------ 608
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 609 ---QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPES 659
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
D + +++G M++ + + I + K + A PA L + Q P
Sbjct: 660 DEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------TP 707
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP+
Sbjct: 708 LIRTANNTVDIRGSRVAESETDIEQAIVRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQ 767
Query: 733 VAKYEQESPMN---YGCTVAYI 751
V ++ Q +P N G T+AY+
Sbjct: 768 VKRF-QLAPQNEGGSGVTIAYL 788
>gi|425465434|ref|ZP_18844743.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
gi|389832333|emb|CCI24146.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
Length = 789
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/742 (35%), Positives = 404/742 (54%), Gaps = 76/742 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ E+E++I CID I DRAS L IR + K E + L+ +
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIKERIYRKLQDIMQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+ N
Sbjct: 176 K--QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G P
Sbjct: 233 LRQYRRQEQIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-- 290
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ +I + ++HPLL K + E+
Sbjct: 291 ---HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV----------- 321
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PWFD +
Sbjct: 322 --VPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDHV 379
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA +ILQ
Sbjct: 380 LADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQ 439
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
YL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNAL IA
Sbjct: 440 YLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIA 499
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 500 QRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQTEKF 554
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEIN 552
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 555 YTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQAGTKTGRDA------ 608
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 609 ---QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPES 659
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
D + +++G M++ + + I + K + A PA L + Q P
Sbjct: 660 DEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------TP 707
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP+
Sbjct: 708 LIRTANNTVDIRGSRVAESETDIEQAITRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQ 767
Query: 733 VAKYEQESPMN---YGCTVAYI 751
+ ++ Q +P N G T+AY+
Sbjct: 768 IKRF-QLAPQNEGGSGVTIAYL 788
>gi|425434478|ref|ZP_18814947.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
gi|389676022|emb|CCH94894.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
Length = 789
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 261/743 (35%), Positives = 404/743 (54%), Gaps = 78/743 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KAS K +P GI + SS+GAT+++EP ++
Sbjct: 176 K------QGGAIQEAVITQRSERWVIPVKASQKEQIP-GIIHDTSSTGATFYIEPHSIID 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
+PI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------IPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSAEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + + +
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQ------AGTKT 604
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 605 GKDAQKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPE 658
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
D + +++G M++ + + I + K + A PA L + Q
Sbjct: 659 SDEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------T 706
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP
Sbjct: 707 PLIRTANNTVDIRGSRVAESETDIEQAIIRATPSGILWIIHGKGTGKLRQGVHDFLSRHP 766
Query: 732 RVAKYEQESPMN---YGCTVAYI 751
+V ++ Q +P N G T+AY+
Sbjct: 767 QVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425460157|ref|ZP_18839639.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
gi|389827152|emb|CCI21729.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
Length = 789
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 266/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KAS K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSERWVIPVKASQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ D + +++G M++ + + I + K + A PA L + Q
Sbjct: 656 SPESDEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTANNTVDIRGSRVAESETDIEQAIVRATPSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP+V ++ Q +P N G T+AY+
Sbjct: 764 RHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|443646823|ref|ZP_21129501.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
gi|159028850|emb|CAO90655.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335652|gb|ELS50116.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
Length = 789
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/742 (35%), Positives = 405/742 (54%), Gaps = 76/742 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ E+E++I CID I DRAS L IR + K E + L+ +
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQIKVIKERIYRKLQDIMQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+ N
Sbjct: 176 K--QGGAIQEAVITQRSERWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G P
Sbjct: 233 LRQYRRQEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-- 290
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ +I + ++HPLL K + E+
Sbjct: 291 ---RFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV----------- 321
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
+PI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PWFD +
Sbjct: 322 --IPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQV 379
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA +ILQ
Sbjct: 380 LADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQ 439
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
YL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNAL IA
Sbjct: 440 YLADHSLLTVATTHYGELKALKYQDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIA 499
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G + +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 500 QRLGLNPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQTEKF 554
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEIN 552
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 555 YTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQAGTKTGRDA------ 608
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 609 ---QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPES 659
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
D + +++G M++ + + I + K + A PA L + Q P
Sbjct: 660 DEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------TP 707
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP+
Sbjct: 708 LIRTANNTVDIRGSRVAESETDIEQAIVRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQ 767
Query: 733 VAKYEQESPMN---YGCTVAYI 751
V ++ Q +P N G T+AY+
Sbjct: 768 VKRF-QLAPQNEGGSGVTIAYL 788
>gi|425450195|ref|ZP_18830027.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
gi|389769051|emb|CCI05979.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
Length = 789
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRQEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
+PI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------IPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSAEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ D + +++G M++ + + I + K + A PA L + Q
Sbjct: 656 SPESDEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTANNTVDIRGSRVAESETDIEQAIIRATPSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP+V ++ Q +P N G T+AY+
Sbjct: 764 RHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425456967|ref|ZP_18836673.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
gi|389801826|emb|CCI19076.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
Length = 789
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/743 (35%), Positives = 404/743 (54%), Gaps = 78/743 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSERWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRQEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILGALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + S +
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQ------SGTKT 604
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 605 GRDAQKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPE 658
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ + +++G M++ + + I + K + A PA L + Q
Sbjct: 659 SEEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------T 706
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP
Sbjct: 707 PLIRTANNTVDIRGSRVAESETDIEQAIVRATPSGILWIIHGKGTGKLRQGVHDFLSRHP 766
Query: 732 RVAKYEQESPMN---YGCTVAYI 751
+V ++ Q +P N G T+AY+
Sbjct: 767 QVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425469689|ref|ZP_18848604.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
gi|389880428|emb|CCI38809.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
Length = 789
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP ++
Sbjct: 176 K------QGGAIQEAVITQRSERWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIID 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNTIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
+PI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------IPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSAEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ + + +++G M++ + + I + K + PA L + Q
Sbjct: 656 SPESEEISLRFGMMKMTLPLDQIESLDGQKVETVPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++TS N++D+RG RV E+ ++ A+ S +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTSNNTVDIRGSRVAESETDIEQAIVRATSSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP+V ++ Q +P N G T+AY+
Sbjct: 764 RHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425446466|ref|ZP_18826469.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
gi|389733282|emb|CCI02921.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
Length = 789
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/743 (35%), Positives = 404/743 (54%), Gaps = 78/743 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRQEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAKEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + S +
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINDVIRRLQ------SGTKT 604
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 605 GRDAQKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPE 658
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ + +++G M++ + + I + K + A PA L + Q
Sbjct: 659 SEEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------T 706
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L HP
Sbjct: 707 PLIRTANNTVDIRGSRVAESETDIEQAIVRATPSGILWIIHGKGTGKLRQGVHDFLSRHP 766
Query: 732 RVAKYEQESPMN---YGCTVAYI 751
+V ++ Q +P N G T+AY+
Sbjct: 767 QVKRF-QLAPQNEGGSGVTIAYL 788
>gi|390440129|ref|ZP_10228481.1| MutS2 protein [Microcystis sp. T1-4]
gi|389836495|emb|CCI32605.1| MutS2 protein [Microcystis sp. T1-4]
Length = 789
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/743 (35%), Positives = 406/743 (54%), Gaps = 78/743 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSERWVLPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQISPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYQDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G + +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLNPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + + +
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQ------AGTKT 604
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ + +
Sbjct: 605 GKDAQKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPE 658
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ + +++G M++ + + I + K + A PA L + Q
Sbjct: 659 SEEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE------------T 706
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
P ++T+ N++D+RG RV E+ ++ A+ S +L++IHG GTG +++ V + L HP
Sbjct: 707 PLIRTANNTVDIRGSRVAESETDIEQAIIRATSSGILWIIHGKGTGKLRQGVHDFLSRHP 766
Query: 732 RVAKYEQESPMN---YGCTVAYI 751
+V ++ Q +P N G T+AY+
Sbjct: 767 QVKRF-QLAPQNEGGSGVTIAYL 788
>gi|434396858|ref|YP_007130862.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
gi|428267955|gb|AFZ33896.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
Length = 799
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 259/748 (34%), Positives = 415/748 (55%), Gaps = 77/748 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ ELE++I CID + + DRA+ L IR++ KR + + +L+ +
Sbjct: 118 LTQLVTELRTYPELEQEIHHCIDDRGEVT-DRANPKLAEIRSQIKRLRDKIYKILQNIVQ 176
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q G + + +IT+R R + +KA K +P GI ++SS+G+T ++EP V+ N
Sbjct: 177 K--QGGAVQEAVITQRDGRFVIPVKAPQKDSIP-GIVHDISSTGSTLYVEPNAVVQLGNQ 233
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E EE A+L LT ++A + +++ L+ +DLA ARA ++ W+ P
Sbjct: 234 LRQAERQEKREEEAVLRALTEKVAAVQEDLEQLLAIATVLDLATARARYSWWLGANPPRF 293
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
V+ ++ + ++HPLL+ + + +E+
Sbjct: 294 VD---VNQGETVTLRQLRHPLLVWQ---------------QQHEQGTEV----------- 324
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPID++++ + RVV ITGPNTGGKT ++KT+GLA+LM+KAGL++PAK +PWF+ +
Sbjct: 325 --VPIDVQIQPQIRVVAITGPNTGGKTVTLKTIGLAALMAKAGLFIPAKEPVEIPWFEQV 382
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVS-RESLVLIDEIGSGTDPSEGVALATSIL 374
LADIGD QSL+Q+LSTFSGHI RI I+E S ++SL+L DEIG+GTDP+EG ALA +IL
Sbjct: 383 LADIGDEQSLQQSLSTFSGHIRRISRIIETSSLQDSLILFDEIGAGTDPAEGSALAIAIL 442
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
+YL ++ L + TTHY +L LK +D RFENA+ EF+ +TL+PTYR+LWG G SNAL I
Sbjct: 443 KYLAEKALLTIATTHYGELKALKYQDERFENASVEFNDQTLKPTYRLLWGIPGRSNALTI 502
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIM 493
A +G +II+ AQ+ R ++ L S +E ERR+ E++A+ A L +
Sbjct: 503 AHRLGLKSEIIEDAQQ-----RVGVSASQELNLVISALEAERREQENKAKEATKLLEQTE 557
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QLRDASA 548
Y E+ +A L R LK + + VQQ + AK +I V++ + Q +
Sbjct: 558 RFYTEVSAKASSLQERERELKISQEKAVQQAILAAKGEIAQVIRRLQQGEQTAQKAQKAT 617
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+E+N + +E +A + R + P+ GE++ + SLG + V+ +
Sbjct: 618 EELNQI---AERELAKTKQPKR----------TKPGYKPKVGERIKIPSLG-QTGEVLSI 663
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
++ + V++G M++ V + I + K + A ++ S+ + A
Sbjct: 664 DEEEKQLTVRFGLMKMTVAVDEIESLDGQKVETAVKA-----------KTASSTKTKPAA 712
Query: 669 SYGP-RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ P V+TSKN++DLRG RV A L+ A+A VL++IHG GTG ++E + E L
Sbjct: 713 AKPPVAVRTSKNTIDLRGSRVANAEADLENAIASATESGVLWIIHGKGTGRLREGIHEFL 772
Query: 728 RNHPRVAKYEQESPMN---YGCTVAYIK 752
+ HP++ ++E +P N G TV Y+K
Sbjct: 773 KRHPQIERFEL-APQNEGGSGVTVVYLK 799
>gi|425439812|ref|ZP_18820127.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
gi|389719875|emb|CCH96352.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
Length = 789
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 263/746 (35%), Positives = 405/746 (54%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 71
L EL+ E+E++I CID I DRAS L IR + R+R L +++
Sbjct: 117 LKELVAEIRTYPEIEQEIHRCIDEDGRIS-DRASPQLREIRGQMKVIRERIYRKLQDIMQ 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K Q G I + +IT+R R + +KA+ K +P GI + SS+GAT+++EP V+
Sbjct: 176 K------QGGAIQEAVITQRSDRWVIPVKAAQKEQIP-GIIHDTSSTGATFYIEPHSIVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL L+ IA++ +++YL+ +DLA ARA ++ W++G
Sbjct: 229 QGNQLRQYRRLEQIEEEKILRQLSNLIAEAFEDLEYLLAIATRLDLATARARYSLWLEGN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + ++HPLL K + E+
Sbjct: 289 PP-----HFIDGSETITLRNLRHPLLWWQ---------------KHHEQGGEV------- 321
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPI++++ E RVV ITGPNTGGKT ++KTLGLA+LM+KAGL++PA+ +PW
Sbjct: 322 ------VPINVQITPEIRVVAITGPNTGGKTVTLKTLGLAALMAKAGLFIPAREPVEIPW 375
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD +LADIGD QSL+Q+LSTFSGHI RIV IL ++ SLVL+DE+G+GTDP+EG LA
Sbjct: 376 FDQVLADIGDEQSLQQSLSTFSGHIRRIVRILAALNSRSLVLLDEVGAGTDPAEGSPLAI 435
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+ILQYL D L V TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 436 AILQYLADHSLLTVATTHYGELKALKYRDSRFENASVEFDDRTLSPTYRLLWGIPGRSNA 495
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A+ + L E Q + L +RR+ ES+A+ A+ L +
Sbjct: 496 LTIAQRLGLSPEIVAEARNHLGGLSEEINQ-----VIAGLEAQRREQESKAQEASQLLQQ 550
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA 548
Y E+ A L R LK + Q++Q+ L AK +I+ V++ + RDA
Sbjct: 551 TEKFYTEVSTRANSLQERERELKRYQEQEIQKALLSAKAEINEVIRRLQAGTKTGRDA-- 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ + AI E P +E ++ PQ GE+V + +LG + A V+ +
Sbjct: 609 -------QKATEELTAIAERLLPK-----TEKTKVNYRPQVGERVRLPNLG-QTAEVLAI 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ + + +++G M++ + + I + K + A PA L + Q
Sbjct: 656 SPESEEISLRFGMMKMTLPLDQIESLDGQKVETAPKPAKNLPQTPTKPQE---------- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
P ++T+ N++D+RG RV E+ ++ A+ +L++IHG GTG +++ V + L
Sbjct: 706 --TPLIRTANNTVDIRGSRVAESETDIEQAITRATPSGILWIIHGKGTGKLRQGVHDFLS 763
Query: 729 NHPRVAKYEQESPMN---YGCTVAYI 751
HP++ ++ Q +P N G T+AY+
Sbjct: 764 RHPQIKRF-QLAPQNEGGSGVTIAYL 788
>gi|428215373|ref|YP_007088517.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
gi|428003754|gb|AFY84597.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
Length = 846
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 271/751 (36%), Positives = 410/751 (54%), Gaps = 65/751 (8%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM-----ENL 66
+ S L L+ + E+E++I CID + + DRAS L IR +R+R + + L
Sbjct: 151 QLSVLNRLVADLRTYPEIEQEIHRCIDDRAQVA-DRASTRLGEIR-QRQRTVRDQIYQKL 208
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
S+L++ + + + LITKR R + +K+ K +P GI + S SGAT ++EP
Sbjct: 209 QSILQR------HSNAVQEQLITKRSDRFVIPVKSPQKDAIP-GIVHDSSMSGATLYVEP 261
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
VE NN L E AEE AIL LTA+I + +++ L+ V +DLA ARA ++
Sbjct: 262 HSVVELNNKARVLLREEKAEEEAILRALTAKITEVVEDLERLLAIVTILDLATARARYSY 321
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
W++ P ++ +I + ++HPLL+ A
Sbjct: 322 WLNANPPTFINRGEEG--QTITLRQLRHPLLIWQQQHEQGNAV----------------- 362
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VPID+ V+ + +VV ITGPNTGGKT ++KTLGL LM+K GL++PAK
Sbjct: 363 -----------VPIDLIVQPQIKVVAITGPNTGGKTVTLKTLGLGILMAKVGLFIPAKVP 411
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LPWFD +LADIGD QSLEQ+LSTFSGHI RI IL + +SLVL+DE+G+GTDP+EG
Sbjct: 412 VELPWFDFVLADIGDEQSLEQSLSTFSGHIRRISRILGSCTPDSLVLLDEVGAGTDPTEG 471
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA ++L +L D L + TTHY +L LK +D RFENA+ EF TL+PTYR+LWG
Sbjct: 472 SALAIALLHHLADCSQLTIATTHYGELKALKYEDDRFENASVEFDEATLQPTYRLLWGIP 531
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNAL IA+ +G +I+ +A LV P Q + L +R++ E++A+ A
Sbjct: 532 GRSNALTIARRLGLTSEIVDQAANLVA---PTGTQD-VDRVIAGLENQRKQQETKAQEAG 587
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L E LYRE+ D+AK L R L+ + Q V + + AK +I V++ Q +
Sbjct: 588 QLLGETERLYREVADKAKSLKERERQLQQSQEQAVAEAIAVAKQEIAQVIRRL--QQGNV 645
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
+ + N ++ + I E H P V++ F P+ G++V + +G + V+
Sbjct: 646 TGQDANQATQD----LQGIAEKHLPSRQQKVAKPK-PGFRPKAGDRVRIPQIG-QTGEVL 699
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
V D V V++G M++ + I + K P + Q + S +A ++ E
Sbjct: 700 AVGEGDLEVTVRFGLMKMTIGITEIESLDGQK---VELPPKKPAATQTTKVSPAAEAATE 756
Query: 667 E-ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACW-ESRSVLFVIHGMGTGVVKERVL 724
+ A+ P V+TS+N+LD+RG RV +A +L+ A+ L+++HG GTG +++ V
Sbjct: 757 KVATQAPIVRTSRNNLDIRGARVADAEMELEQAIGQQIPLGGALWIVHGKGTGKLRQGVQ 816
Query: 725 EILRNHPRVAKYEQESPMN---YGCTVAYIK 752
E L+ HP+++ YE +P N G T+AY+K
Sbjct: 817 EFLKQHPQISHYEL-APQNEGGSGVTIAYLK 846
>gi|428778485|ref|YP_007170271.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
gi|428692764|gb|AFZ48914.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
Length = 798
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 254/749 (33%), Positives = 406/749 (54%), Gaps = 74/749 (9%)
Query: 14 SPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
SP L+ L+ ELE++I C+D K + +RAS L IR + K + + L+
Sbjct: 114 SPRLKALISQVRTYPELEKEINRCLDDKGKVT-ERASPKLAEIRQKIKERRDRIYQKLQN 172
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ Q Q G I +P+IT+R R + +KA K + GI + SS+GAT ++EP VE
Sbjct: 173 IIQQ--QGGAIQEPVITQRNDRFVLPVKAGQKESI-RGIVHDSSSTGATLYIEPNSVVEL 229
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N + + E EE +L +LT ++A + +++ L+ ++DLA AR+ ++ W++
Sbjct: 230 GNQQRQYIRQEQREEERVLQVLTEQVATVKEDLELLLAVATKLDLATARSRYSLWLEANP 289
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P + + I + ++HPLL+ P+
Sbjct: 290 PRFVEGNS---NEPITLRRLRHPLLV------WQQHHEQGTPV----------------- 323
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VPID+++ ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK +PWF
Sbjct: 324 -----VPIDVQINPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPVEIPWF 378
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------RESLVLIDEIGSGTDPSEG 366
D ILADIGD QS+EQNLSTFSGHI RI I++ + + L+L+DE+G+GTDP+EG
Sbjct: 379 DKILADIGDEQSIEQNLSTFSGHIRRITRIIDSLQPSDSEIQPCLILLDEVGAGTDPAEG 438
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A+A ++L+YL +V L + TTHY +L LK +D RFENA+ EF+ ETL PTYR+LWG
Sbjct: 439 SAIAIALLKYLAQQVRLTIATTHYGELKALKYQDERFENASVEFNDETLSPTYRLLWGIP 498
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNAL IA+ +G +I+ A+ + + Q + L +RR+ E +A+ A
Sbjct: 499 GRSNALTIARRLGLAGEILDMAKNRIGGGSEDINQ-----VIAGLENQRREQEEKAQEAR 553
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L + Y+E+ A+ L+ R LK + Q V Q ++ AK +I V++ +
Sbjct: 554 QLLEQAEKFYQEVSSRAQALEARETELKRSQEQAVNQAISEAKQEIAQVIKQLQK----- 608
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
++ +++ +++ I HRP + + N + PQ GE+V + ++ V+
Sbjct: 609 -GEKTGQEAQKATASVNEIASRHRPQIEPPKPKPN---YQPQIGEKVRLSQF-NQTGEVL 663
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
P D + ++ G M++ V +I + ++ + +Q S S +
Sbjct: 664 TAPNADGKLTIRLGTMKMSVSLADIESLDG------------IKPEVPQKQKSSNSSQKK 711
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 726
A+ P V+T +N+LDLRG RV A QL+ A+ ++ L++IHG GTG +++ V E
Sbjct: 712 PANNAPTVRTEQNTLDLRGYRVNHAESQLEEAIRS-QNTGALWIIHGKGTGKLRQGVQEF 770
Query: 727 LRNHPRVAKYEQESPMN---YGCTVAYIK 752
L+ HP++ ++E +P N G T+AY+K
Sbjct: 771 LKQHPQIDRFET-APQNEGGNGVTIAYLK 798
>gi|186680652|ref|YP_001863848.1| recombination and DNA strand exchange inhibitor protein [Nostoc
punctiforme PCC 73102]
gi|186463104|gb|ACC78905.1| MutS2 family protein [Nostoc punctiforme PCC 73102]
Length = 805
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 265/756 (35%), Positives = 408/756 (53%), Gaps = 86/756 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ + ELE++I CID + + DRAS+ L IR + +R L S + +
Sbjct: 117 LTELVADLRTYPELEQEIHRCIDERAQVT-DRASQKLGEIRTDLRR----LRSQITQKLQ 171
Query: 76 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I QA G + + LIT+R R + +KA K +P GI + S+SGAT ++EP V
Sbjct: 172 NILQAKSGAVQEQLITQRSDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N ++ E AEE AI +LT ++A + +++ L+ +DLA AR+ ++ W+ G P
Sbjct: 231 NQLRQIIRKEQAEEEAIRRILTEQVAAVKPDLERLLAIATTLDLATARSRYSYWL-GANP 289
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
Q S +I + ++HPLL+ P+
Sbjct: 290 PRFIQRQDS--ETITLRNLRHPLLVWQQ------QHEQGQPV------------------ 323
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD
Sbjct: 324 ----VPVDLLINPLIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFD 379
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---------------ESLVLIDEIG 358
+LADIGD QSL+Q+LSTFSGHI RI ILE + +SLVL+DE+G
Sbjct: 380 KVLADIGDEQSLQQSLSTFSGHIRRISRILEALGNGESGSEDGEKEMPNPQSLVLLDEVG 439
Query: 359 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 418
+GTDP EG ALA ++LQYL + L + TTH+ +L LK +D RFENA+ EF TL PT
Sbjct: 440 AGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYEDERFENASVEFDESTLSPT 499
Query: 419 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 478
YR+LWG G SNAL IA +G +++Q+A+ V E Q + L +RR+
Sbjct: 500 YRLLWGIPGRSNALTIALRLGLKPEVVQQAKTQVGEATDEVNQ-----VIAGLEAQRRRQ 554
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 538
E++A A SL + LY+E+ +A L+ R + L+A + VQQ + AK +I V++
Sbjct: 555 ETKAAEAQSLLQQAERLYKEVSAKAASLEERESSLRASQEIAVQQAIVQAKGEIAQVIRR 614
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
+ A +++ +A+ I + ++P + + F P+ G++V + L
Sbjct: 615 LQKGTPTAQE------AQQATNALNQIGQLYQP----ATPAKPKAGFMPKVGDRVRIPKL 664
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G ++A V+ P +D + V++G M++ VK ++ + K P P ++ +
Sbjct: 665 G-QIADVIAAPDEDGELSVRFGLMKMTVKLQDVESLDGQK------PEPIVKAKPAPAAV 717
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 718
S P ++TSKN++DLRG RV +A + LD A++ E+ +++IHG GTG
Sbjct: 718 TPPAQSV------PEIRTSKNTIDLRGKRVADAEYILDKAIS--EATGPIWIIHGYGTGK 769
Query: 719 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+++ V L+ HPRV YE +++ G TVA+IK
Sbjct: 770 LRQGVHAFLQQHPRVNNYEPAEQADGGTGVTVAHIK 805
>gi|67923383|ref|ZP_00516863.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
gi|67854764|gb|EAM50043.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
Length = 806
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 261/754 (34%), Positives = 407/754 (53%), Gaps = 81/754 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ + ELE+ I CID + + DRAS LE IR K E D + +K+
Sbjct: 117 LKELVADIRTYPELEKAIHHCID-EAGKVTDRASPKLESIRHNLK---EVRDRIYQKLQN 172
Query: 76 QIFQAGG-IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
I Q GG I +P+IT+R R + +KA K +P GI + S +G T+++EP V+ N
Sbjct: 173 IIQQKGGAIQEPVITQRGDRFVIPVKAGQKEQIP-GITHDTSGTGGTFYIEPNSVVQMGN 231
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+ E EE IL LT +IA+ +++YL+ + +DLA ARA ++ W+ P
Sbjct: 232 KRRQYLRQEEREEETILRQLTEKIAEVAEDLEYLLAIAMVLDLATARARYSFWLGANPP- 290
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
+ +I + + HPLL+ +P+
Sbjct: 291 ----RFIQDKETITLRQLHHPLLV------WQEKHEQGSPV------------------- 321
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
+PI+++++ + RV+ ITGPNTGGKT ++KTLGLA+LM+K GL++PAK +PWF+
Sbjct: 322 ---IPINVQIKPDIRVIAITGPNTGGKTVTLKTLGLAALMAKVGLFVPAKEPVEIPWFEK 378
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR-------------ESLVLIDEIGSGT 361
ILADIGD QS+EQNLSTFSGHI RIV ILE + + SL+L+DE+G+GT
Sbjct: 379 ILADIGDEQSIEQNLSTFSGHIRRIVRILEALEQATLSPETLPHSPSPSLILLDEVGAGT 438
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA ++L L D+ L + TTHY +L LK +D+RFENA+ EF T PTYR+
Sbjct: 439 DPAEGSALAMALLNRLADQARLTIATTHYGELKALKYEDSRFENASVEFDDRTFSPTYRL 498
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL+IA+ +G D +I A+ + L + +++ L +RRK E +
Sbjct: 499 LWGIPGRSNALSIAQRLGLDVDVIDEAKTRIGGLSQD-----VNDVIAGLEAQRRKQEEK 553
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A+ A L + Y E+ +A L R LK + +VQ+ + AK +I V+++ +
Sbjct: 554 AQEAQKLLQQTEKFYGEVTQKATALQEREQDLKRYQELEVQKAIADAKEEIAKVIRNLQK 613
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
++ + +++ AI I + P S+ P+ GE++ + +LG +
Sbjct: 614 ------GNKSSQNAQKATEAINNISQRQLPK-----KVKPKVSYQPKVGEKIRLSNLG-Q 661
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
A V+EV +D+ V+V++G M++ V +I + K + K +E +Q+ +
Sbjct: 662 TAEVLEVSAEDEEVMVRFGLMKMTVAFRDIESLDGQKIET---------KVKEKKQAVTP 712
Query: 662 GSSNEEASYG-PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVK 720
P ++TSKN++D+RG RV EA L+ A+A +L++IHG GTG ++
Sbjct: 713 PPPQPSKPKDVPTIRTSKNTIDIRGSRVAEAEADLENAIAQATDSGILWIIHGKGTGKLR 772
Query: 721 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ V E L+ HP++AK+E + G T+A+ K
Sbjct: 773 QGVHEFLKRHPQIAKFELAPQKEGGSGVTLAHFK 806
>gi|254425115|ref|ZP_05038833.1| MutS2 family protein [Synechococcus sp. PCC 7335]
gi|196192604|gb|EDX87568.1| MutS2 family protein [Synechococcus sp. PCC 7335]
Length = 798
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 263/759 (34%), Positives = 407/759 (53%), Gaps = 96/759 (12%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L+ L+++ ELE++I CID + + DRAS L +R + K + + S L+++
Sbjct: 114 PVLQALVEDLRTFPELEQEIHRCIDDRGQVA-DRASTKLGNVRQQLKVIRDRIYSKLQRI 172
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ Q G + + LIT+R R + +KA+ K +P GI +VS+SG+T ++EP V+
Sbjct: 173 IQR--QGGALQEALITQRNDRFVLPVKAAQKDAVP-GIVHDVSTSGSTLYVEPHSIVDNG 229
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L E E AI +LT ++A++ ++++LM ++++DLA ARA + WM+G P
Sbjct: 230 NKRRALRKEEEVESEAIRQMLTYQVAEAFPDLEHLMITIVKLDLAAARARYGLWMEGNAP 289
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+Q I + + HPLLL K
Sbjct: 290 RFVNQEQ------ITLRQLTHPLLLWQQ----------------------------EKEQ 315
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
D VP D+ + E RVV ITGPNTGGKT ++KTLGL +LM+K G+++PAK LPWFD
Sbjct: 316 KDKVVPTDLVMRPELRVVAITGPNTGGKTVTLKTLGLTALMAKVGMFIPAKEPVELPWFD 375
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------ESLVLIDEIGSGTDPSE 365
+LADIGD QS+EQ+LSTFSGH+ RI IL+ + SLVL+DE+G+GTDPSE
Sbjct: 376 SVLADIGDEQSIEQSLSTFSGHVKRIGRILDTIDELKGENEVANSLVLLDEVGAGTDPSE 435
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G ALA ++L++L + L V TTHY +L LK +D RFENA+ EF E L PTYR+LWG
Sbjct: 436 GSALAIALLKHLANNTRLTVATTHYGELKSLKYEDERFENASVEFDDEKLAPTYRLLWGI 495
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
G SNAL+IA+ +G ++++A+ + + + + L +R+K E +A A
Sbjct: 496 PGRSNALSIARRLGLKHSVLEQAKAQM-----GGTNDNVNTVIEGLEAQRQKQEKRAAEA 550
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE----- 540
L A Y+E+E A+ L R LK ++ + V+ L A+ ++ V++D +
Sbjct: 551 EKLVARAEKFYKEVEARAQSLRDREQKLKRQQEKSVETSLLHARAEVAKVIRDLQKGGLT 610
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS-ETNTSSFTPQFGEQVHVKSLG 599
Q + +E+N I E P D ++ + + P+ E+V + SLG
Sbjct: 611 GQDAQRATEELNR-----------IEEKRLPTGDHPAKVKSADTGYRPKVSERVRLASLG 659
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK-----RKNAANPAPRLRKQQE 654
+++A V+E DD V V++G M++ V ++I + K RK A P P+ +
Sbjct: 660 NQVAEVIEEADDDGKVAVRFGLMKMTVDLSDIESLKGEKAEPIERKPKAQPVPKTLPE-- 717
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGM 714
P V+T N++DLRGMRV EA ++ A+A +++ L++IHG
Sbjct: 718 ----------------APMVKTESNTVDLRGMRVNEAESVIEEAIA--KAKGPLWLIHGH 759
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYI 751
GTG ++ V L+ HP+V +E ++ G TVA I
Sbjct: 760 GTGKLRRGVQAYLKTHPQVKSFEAADQVDGGKGVTVAKI 798
>gi|443320530|ref|ZP_21049624.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
gi|442789744|gb|ELR99383.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
Length = 793
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 257/748 (34%), Positives = 413/748 (55%), Gaps = 77/748 (10%)
Query: 14 SPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+P+LE L+ ELE++I +CID + + DRAS L IR++ K + +L+
Sbjct: 114 TPVLENLVATVRTYPELEQEIYYCID-EGGEVEDRASLKLAEIRSKLKEFRNKIQKILQG 172
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + Q + + LIT+R R + +K HK +P GI + SS+G+T ++EP+ ++
Sbjct: 173 IIQR--QGNALQETLITQRSDRFVLPVKTPHKEQIP-GIVHDSSSTGSTLYVEPQAIIQL 229
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N +L E AE +L LT ++A +++ ++ +DLA ARA ++ W++
Sbjct: 230 GNQLKQLLRREQAEIEIVLKALTEKVAAITSDLEQVVLVATTLDLATARANYSYWLNAHP 289
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P L S + +++I + +KHPLL+ A
Sbjct: 290 PQLIS---LDQEATITLRELKHPLLIWQEKHEQGPAV----------------------- 323
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VPI+++++ + RVV ITGPNTGGKT ++KT+G+A+LM+K GL++PA + +PWF
Sbjct: 324 -----VPINVRIQPDIRVVAITGPNTGGKTVTLKTIGIAALMAKVGLFIPAADPVEIPWF 378
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVS-----RESLVLIDEIGSGTDPSEGV 367
+ ILADIGD QSLEQ+LSTFSGHI RI+ IL+ + R +LVL+DE+G+GTDP+EG
Sbjct: 379 EKILADIGDEQSLEQSLSTFSGHIKRIIRILDAIGRPEDLRSALVLLDEVGAGTDPTEGT 438
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA ++LQ+L D L + TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G
Sbjct: 439 ALAIALLQHLADSAWLTIATTHYGELKALKYQDSRFENASVEFDEATLAPTYRLLWGIPG 498
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA+ +G D +I+++A+ V E Q + L +R++ E++A+ A
Sbjct: 499 RSNALMIARRLGLDLEIVEQAKSKVGGYAEEINQ-----VIAGLEAQRKEQENKAQAANQ 553
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E Y EI +AK L +R LK +TQ +Q+ L+ AK +I V++ +
Sbjct: 554 LLQETERFYGEISAKAKALQQREQELKLAQTQAMQEALSQAKAEIAQVIRTLQQ------ 607
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
++ +++ + I D+ + ++ PQ GE++ + SLG + A V+
Sbjct: 608 GEQTAQNAQKARGNLETIA-----DNYLNTQAKPQRTYQPQVGEKIKIPSLG-QTAEVLT 661
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
P + V++G M++ V ++I + K + A P+ + + +
Sbjct: 662 NPDAQGELTVRFGLMKMTVNLSDIESLDGKKAQPPAKTTPKAPPPKPSKIT--------- 712
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
V+T+ N+LD+RG RV +A +LD A+A +L++IHG G+G ++E V E L
Sbjct: 713 ------VRTTANTLDIRGARVADAEIELDRAIAQNTDYQILWIIHGKGSGKLREGVHEFL 766
Query: 728 RNHPRVAKYEQESPMN---YGCTVAYIK 752
+ HP+V K+E +P N G T+AY+K
Sbjct: 767 KQHPQVEKFEL-APQNEGGAGVTLAYLK 793
>gi|376003750|ref|ZP_09781556.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
gi|375327894|emb|CCE17309.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
Length = 818
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 407/754 (53%), Gaps = 71/754 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L++ ELE++I CID + + DRAS + IRA + + + +L+ +
Sbjct: 119 LTSLVEELRTYPELEQEIHRCIDERGEVT-DRASVKMGAIRARLQSTRDRIYQVLQGILQ 177
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ QA + + +IT+R R + +KA K +P GI + S++GAT ++EP V NN
Sbjct: 178 RKAQA--VQQQIITQREGRFVIPVKAPQKDAIP-GIVHDASTTGATVYVEPHSIVALNNQ 234
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
++ +E E AI LT ++A +++ L+ V IDLA A+A ++ W+ P
Sbjct: 235 LRQIQRAEQTEAEAIRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLQANPPRF 294
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
S +IN+ ++HPLL+ + + E V
Sbjct: 295 IDPGDTS--ETINLRQLRHPLLI----------------WQQEYEQGPEVV--------- 327
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
PIDI + + RVV ITGPNTGGKT ++KT+GLA++M+K GL++PA+ +PWF +
Sbjct: 328 ---PIDITINPQIRVVAITGPNTGGKTVTLKTIGLAAIMAKVGLFIPAREPVEMPWFGQV 384
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------------ESLVLIDEIGSGT 361
LADIGD QS+EQ+LSTFSGHI RI IL+ + SLVL+DEIG+GT
Sbjct: 385 LADIGDEQSIEQSLSTFSGHIRRITRILQAIGEPMRVTEAGESDRICPSLVLLDEIGAGT 444
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA ++LQ D L V TTH+ DL LK KDTRFENA+ EF +L+PTYR+
Sbjct: 445 DPTEGTALAIALLQKFADLTRLTVATTHFGDLKALKYKDTRFENASVEFDDASLQPTYRL 504
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA+ +G D I++ A V + Q + + L +RR+ E++
Sbjct: 505 LWGIPGRSNALKIAERLGLDHDIVKLAGSYVGGGDEDVNQ-----VIEGLEAQRRQQETK 559
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A A+ L E L+ E+ + A L R LK + Q++++ L AK +I V++ +
Sbjct: 560 AIAASQLLQETERLHGELAERAISLQERERQLKQAQEQEIKETLLQAKAEIAKVIRRLQ- 618
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
Q + +AD +++ + + AI E + P + + +F P+ G+++ + +G +
Sbjct: 619 QGKATAADA-----QKATARLDAIAENYLPSR--QATPVRSPNFMPKVGDRIRIPRIG-Q 670
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK-NAANPAPRLRKQQEDRQSGS 660
A ++ P D++ + V++G M++ V I + K + +P P+ K +
Sbjct: 671 TAEILSGPDDNNQLTVRFGIMKMTVGLGEIESLDGQKVELPKTSPTPKADK------TPK 724
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVK 720
++ E S PRV+T KN+LDLRG RV EA ++D L L++IHG GTG ++
Sbjct: 725 PITNKPEPSQLPRVRTDKNTLDLRGKRVSEAETEIDRTLGQILDFGALWIIHGKGTGQLR 784
Query: 721 ERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
V E+L+ HP+V ++E S + G T+AY+K
Sbjct: 785 RGVHELLKEHPQVERFELASNPDGGAGVTIAYLK 818
>gi|170079175|ref|YP_001735813.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. PCC 7002]
gi|169886844|gb|ACB00558.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002]
Length = 799
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 262/745 (35%), Positives = 413/745 (55%), Gaps = 71/745 (9%)
Query: 14 SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
S L L++ ELE+ I CID + + DRAS LE IR + K E + L+++
Sbjct: 118 SQLTRLVEQVRTYPELEQDIHHCIDDRGDVT-DRASPKLEGIRVKIKGAREQIYQTLQRI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ +G I + +IT+R R + +KA K +P GI ++SS+G+T ++EPKG VE
Sbjct: 177 MQR--HSGSIQEAVITQRGDRFVLPVKAGQKEQIP-GIVHDISSTGSTLYIEPKGIVELG 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + E E +L LT ++A+ +++ L+ +DLA RA ++ W+DG P
Sbjct: 234 NRLRQAVKQEEREIEIVLRQLTEKVAEVVEDLEKLLAIATTLDLAMTRARYSLWLDGHPP 293
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ D + ++HPLL+ + E+ E+
Sbjct: 294 -----KFIAPDQPTILRQLRHPLLVWQEKQE---------------ESLEV--------- 324
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
+PI++++ E RVV ITGPNTGGKT ++KTLG+A+LM+K GL++PA +PWFD
Sbjct: 325 ----IPINVQIRPEIRVVAITGPNTGGKTVTLKTLGMAALMAKVGLFIPAIAPVEIPWFD 380
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES---LVLIDEIGSGTDPSEGVALA 370
+LADIGD QSL+Q+LSTFSGHI R+ I+E + +ES LVL+DE+G+GTDP+EG ALA
Sbjct: 381 QVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALDQESQNNLVLLDEVGAGTDPTEGSALA 440
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
++L+YL D+ L V TTHY +L LK +D RFENA+ EF +LRPTY++LWG G SN
Sbjct: 441 IALLKYLADQTQLTVATTHYGELKALKYEDERFENASVEFDEYSLRPTYKLLWGIPGRSN 500
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
AL IA+ +G D +I++ AQ L+ +E+ +L +RR+ E +A+ A +L
Sbjct: 501 ALAIAQRLGLDAEIVETAQDLLGNTNT-----NVNEVIAALEAQRREQEQKAKEAEALLK 555
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
+ Y E+ +A DL RR A LK + QQVQ + AK +I V++ + A +
Sbjct: 556 QTERFYTEVSSKAADLQRREAELKLAQDQQVQAAIAEAKAEIAQVIRTLQKGQPTAQKAQ 615
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
+ + E+ IAA S + + PQ GE++ + LG + A V+E+
Sbjct: 616 VAT---EALGDIAA--------SKMSQPKRKKPGYQPQLGEKIRISKLG-QTAEVIELDP 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D+ T++ ++G M++ + I + K + A P P+ K+Q ++ + +
Sbjct: 664 DNKTLVARFGVMKMSLDWTEIESLQGQKVE--AEPKPKTPKKQAPPKAKTPETVT----- 716
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR 728
V+T++N++D+RG R+ +A L+ IA A V+++IHG GTG ++E V E L+
Sbjct: 717 ---VRTTRNTIDIRGQRMHQAESSLEQAIANATAAGSQVIWIIHGKGTGKLREGVHEFLK 773
Query: 729 NHPRVAKYE--QESPMNYGCTVAYI 751
HP++ +YE + G T+AY
Sbjct: 774 YHPQIQRYELADQKEGGAGVTLAYF 798
>gi|126657853|ref|ZP_01729006.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
gi|126620793|gb|EAZ91509.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
Length = 818
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/771 (33%), Positives = 412/771 (53%), Gaps = 91/771 (11%)
Query: 10 FHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 69
+ L EL+ + ELE+ I CID + + DRAS L IR K N + +
Sbjct: 111 YEELPTLTELVADIRTYPELEKTIHHCID-EAGKVADRASTKLGEIRHNLKENRDRIYQK 169
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L+ + Q + G I + +IT+R R + +KA+ K +P GI + S +G T+++EP
Sbjct: 170 LQNIMQQ--KGGAIQETVITQRGDRFVLPVKAAQKEQIP-GIIHDTSGTGGTFYIEPNSV 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ N + E EE AIL L+ ++A+ +++YL+ +DLA AR+ ++ W+
Sbjct: 227 VQMGNKRRQYLRQEEREEEAILRQLSEQVAEVAEDLEYLLAIATILDLATARSRYSFWLG 286
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
G P + +I + + HPLL+ +P+
Sbjct: 287 GNAP-----RFIEDKETITLRQLHHPLLV------WQERHEQGSPV-------------- 321
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPI++++ E RV+ ITGPNTGGKT ++KT+GLA+LM+K GL++PAK L
Sbjct: 322 --------VPINVQINPEIRVIAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPVEL 373
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV-----SRE--------------- 349
PWF ILADIGD QS+EQNLSTFSGHI RIV ILE + SRE
Sbjct: 374 PWFKQILADIGDEQSIEQNLSTFSGHIRRIVRILEALDQGTESREQEAGIRDQGSVLSET 433
Query: 350 ------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
SL+L+DE+G+GTDP+EG ALA ++L +L D L + TTHY +L LK +D+RF
Sbjct: 434 PHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLADHARLTIATTHYGELKALKYEDSRF 493
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +L PTYR+LWG G SNAL+IA+ +G D +I++ A+ + L +
Sbjct: 494 ENASVEFDDRSLSPTYRLLWGIPGRSNALSIAQRLGLDHEIVEEAKTRIGGLSQD----- 548
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++ L +RR+ E +A A L E Y E+ ++A L +R LK + Q+VQ+
Sbjct: 549 VNDVIAGLEAQRREQEEKALEAQKLLQETEKFYTEVTEKATALQQREQDLKRHQEQEVQK 608
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
+ AK +I V+++ + + + +++ AI I + P T
Sbjct: 609 AIAEAKEEIAQVIRNLQQGKKSSQK------AQQATEAITNIGQKQLPK-----KAKPTV 657
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 643
S+ P+ GE++ + +LG + A V++V +D+ V+V++G M++ V +I + K +
Sbjct: 658 SYQPKVGEKIRLSNLG-QTAEVLDVSPEDEEVMVRFGLMKMTVSFRDIESLDGQKVETKV 716
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWE 703
E +Q+ + S + P ++TS+N++D+RG RV EA L+ A+A
Sbjct: 717 K---------EKKQAVTPPPSPSKPKDVPTIRTSRNTIDIRGNRVAEAEADLENAIAQAT 767
Query: 704 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
++++IHG GTG +++ V E L+ HP++A++E + G T+AY K
Sbjct: 768 ESGLIWIIHGKGTGKLRQGVHEFLKRHPQIARFELAPQKEGGSGVTLAYFK 818
>gi|209523920|ref|ZP_03272472.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|423063765|ref|ZP_17052555.1| MutS2 family protein [Arthrospira platensis C1]
gi|209495592|gb|EDZ95895.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|406714614|gb|EKD09775.1| MutS2 family protein [Arthrospira platensis C1]
Length = 816
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 407/754 (53%), Gaps = 71/754 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L++ ELE++I CID + + DRAS + IRA + + + +L+ +
Sbjct: 117 LTSLVEELRTYPELEQEIHRCIDERGEVT-DRASVKMGEIRARLQSTRDRIYQVLQGILQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ QA + + +IT+R R + +KA K +P GI + S++GAT ++EP V NN
Sbjct: 176 RKAQA--VQQQIITQREGRFVIPVKAPQKDAIP-GIVHDASTTGATVYVEPHSIVVLNNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
++ +E E AI LT ++A +++ L+ V IDLA A+A ++ W+ P
Sbjct: 233 LRQIQRAEQTEAEAIRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLQANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
S +IN+ ++HPLL+ + + E V
Sbjct: 293 IDPGDTS--ETINLRQLRHPLLI----------------WQQEYEQGPEVV--------- 325
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
PIDI + + RVV ITGPNTGGKT ++KT+GLA++M+K GL++PA+ +PWF +
Sbjct: 326 ---PIDITINPQIRVVAITGPNTGGKTVTLKTIGLAAIMAKVGLFIPAREPVEMPWFGQV 382
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------------ESLVLIDEIGSGT 361
LADIGD QS+EQ+LSTFSGHI RI IL+ + SLVL+DEIG+GT
Sbjct: 383 LADIGDEQSIEQSLSTFSGHIRRITRILQAIGEPMRVTEAGESDRICPSLVLLDEIGAGT 442
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA ++LQ D L V TTH+ DL LK KDTRFENA+ EF +L+PTYR+
Sbjct: 443 DPTEGTALAIALLQKFADLTRLTVATTHFGDLKALKYKDTRFENASVEFDDASLQPTYRL 502
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA+ +G D I++ A V + Q + + L +RR+ E++
Sbjct: 503 LWGIPGRSNALKIAERLGLDHDIVKLAGSYVGGGDEDVNQ-----VIEGLEAQRRQQETK 557
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A A+ L E L+ E+ + A L R LK + Q++++ L AK +I V++ +
Sbjct: 558 AIAASQLLQETERLHGELAERAISLQERERQLKQAQEQEIKETLLQAKAEIAKVIRRLQ- 616
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
Q + +AD +++ + + AI E + P + + +F P+ G+++ + +G +
Sbjct: 617 QGKATAADA-----QKATARLDAIAENYLPSR--QATPVRSPNFMPKVGDRIRIPRIG-Q 668
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK-NAANPAPRLRKQQEDRQSGS 660
A ++ P D++ + V++G M++ V I + K + +P P+ K +
Sbjct: 669 TAEILSGPDDNNQLTVRFGIMKMTVGLGEIESLDGQKVELPKTSPTPKADK------TPK 722
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVK 720
++ E S PRV+T KN+LDLRG RV EA ++D L L++IHG GTG ++
Sbjct: 723 PITNKPEPSQLPRVRTDKNTLDLRGKRVSEAETEIDRTLGQILDFGALWIIHGKGTGQLR 782
Query: 721 ERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
V E+L+ HP+V ++E S + G T+AY+K
Sbjct: 783 RGVHELLKEHPQVERFELASNPDGGAGVTIAYLK 816
>gi|257061571|ref|YP_003139459.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8802]
gi|256591737|gb|ACV02624.1| MutS2 family protein [Cyanothece sp. PCC 8802]
Length = 830
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/786 (32%), Positives = 417/786 (53%), Gaps = 115/786 (14%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
+ L EL+++ E+E+ I CID + + DRAS L IR R R ++ L +
Sbjct: 114 FPILAELVEDVRTYPEIEQNIYHCID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQN 172
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++++ Q G I +P+IT+R R + +KA K +P GI + SS+GAT ++EP
Sbjct: 173 IIQR------QGGAIQEPVITQRGDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNS 225
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE+ N + E EE AIL L+AEIA+ ++ YL+ +DL A+A ++ W+
Sbjct: 226 IVEWGNKRRQYLRQEQVEEEAILRKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWL 285
Query: 189 DGVCPILSSQSHVSFDSS--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+G P ++FD + I + ++HPLL+ P+
Sbjct: 286 EGNAP-----RFINFDQTEPITLRQLRHPLLV------WQQKHEQGVPV----------- 323
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VPI+++V+ + RVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK
Sbjct: 324 -----------VPINVQVDPKIRVVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEP 372
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----------------- 349
+PWF+ +LADIGD QS+EQ+LSTFSGHI RIV I E + +
Sbjct: 373 VEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQG 432
Query: 350 --------------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 389
+LVL+DE+G+GTDP+EG ALA ++L YL D L + TTH
Sbjct: 433 SSENIPPSPPPPLPPSPPPNTLVLLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTH 492
Query: 390 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 449
Y +L LK +D+RFENA+ EF +TL PTYR+LWG G SNAL IA+ +G + +I+Q A+
Sbjct: 493 YGELKALKYQDSRFENASVEFDDQTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAK 552
Query: 450 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 509
+ E Q + L +RR+ E +A A L + Y E+ ++A L +R
Sbjct: 553 TRIGGFSEEINQ-----VIAGLEAQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQR 607
Query: 510 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 569
LK + Q+VQ+ + AK +I V++ + + A +++ A+ I +
Sbjct: 608 EQELKRYQEQEVQKAIAQAKEEIAQVIRQLQQGSQTAQK------AQQATEALDQITQHQ 661
Query: 570 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
P + +S+ P+ GE++ + +LG + A V+E+ + + V++G M++ V
Sbjct: 662 LPK-----TPKKQASYQPKVGERIRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALT 715
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
I + K + Q + + + ++++ P ++TS+N++D+RG RV
Sbjct: 716 EIESLDGKK----------VEVQTQKKTPTVTATKPDKSASVPIIRTSQNTVDIRGSRVA 765
Query: 690 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGC 746
EA L+ A+A + +L++IHG GTG +++ V E L+ HP++ ++E +P N G
Sbjct: 766 EAESDLEKAIALATASGILWIIHGKGTGKLRQGVHEFLKLHPQIDRFEL-APQNEGGSGV 824
Query: 747 TVAYIK 752
T+AY+K
Sbjct: 825 TLAYLK 830
>gi|218248506|ref|YP_002373877.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8801]
gi|218168984|gb|ACK67721.1| MutS2 family protein [Cyanothece sp. PCC 8801]
Length = 830
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/786 (32%), Positives = 417/786 (53%), Gaps = 115/786 (14%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
+ L EL+++ E+E+ I CID + + DRAS L IR R R ++ L +
Sbjct: 114 FPILAELVEDVRTYPEIEQNIYHCID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQN 172
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++++ Q G I +P+IT+R R + +KA K +P GI + SS+GAT ++EP
Sbjct: 173 IIQR------QGGAIQEPVITQRGDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNS 225
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE+ N + E EE AIL L+AEIA+ ++ YL+ +DL A+A ++ W+
Sbjct: 226 IVEWGNKRRQYLRQEQVEEEAILRKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWL 285
Query: 189 DGVCPILSSQSHVSFDSS--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+G P ++FD + I + ++HPLL+ P+
Sbjct: 286 EGNAP-----RFINFDQTELITLRQLRHPLLV------WQQKHEQGVPV----------- 323
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VPI+++V+ + RVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK
Sbjct: 324 -----------VPINVQVDPKIRVVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEP 372
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----------------- 349
+PWF+ +LADIGD QS+EQ+LSTFSGHI RIV I E + +
Sbjct: 373 VEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQG 432
Query: 350 --------------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 389
+LVL+DE+G+GTDP+EG ALA ++L YL D L + TTH
Sbjct: 433 SSENIPPSPPPPLPPSPPPNTLVLLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTH 492
Query: 390 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 449
Y +L LK +D+RFENA+ EF +TL PTYR+LWG G SNAL IA+ +G + +I+Q A+
Sbjct: 493 YGELKALKYQDSRFENASVEFDDQTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAK 552
Query: 450 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 509
+ E Q + L +RR+ E +A A L + Y E+ ++A L +R
Sbjct: 553 TRIGGFSEEINQ-----VIAGLEAQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQR 607
Query: 510 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 569
LK + Q+VQ+ + AK +I V++ + + A +++ A+ I +
Sbjct: 608 EQELKRYQEQEVQKAIAQAKEEIAQVIRQLQQGSQTAQK------AQQATEALDQITQHQ 661
Query: 570 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
P + +S+ P+ GE++ + +LG + A V+E+ + + V++G M++ V
Sbjct: 662 LPK-----TPKKQASYQPKVGERIRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALT 715
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
I + K + Q + + + ++++ P ++TS+N++D+RG RV
Sbjct: 716 EIESLDGKK----------VEIQTQKKTPTVTATKPDKSASVPIIRTSQNTVDIRGSRVA 765
Query: 690 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGC 746
EA L+ A+A + +L++IHG GTG +++ V E L+ HP++ ++E +P N G
Sbjct: 766 EAESDLEKAIALATASGILWIIHGKGTGKLRQGVHEFLKLHPQIDRFEL-APQNEGGSGV 824
Query: 747 TVAYIK 752
T+AY+K
Sbjct: 825 TLAYLK 830
>gi|428223909|ref|YP_007108006.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
gi|427983810|gb|AFY64954.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
Length = 791
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/738 (35%), Positives = 404/738 (54%), Gaps = 66/738 (8%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ E+E+ I FCID + + +DRAS L IR +++ E + L ++
Sbjct: 117 LTELVSELRTYPEIEQSIHFCIDDRGEV-MDRASPKLAEIREKQRSQREEVRQTLFRIMQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ QA + + +IT+R R + +KASHK +P GI + S+SGAT ++EP VE NN
Sbjct: 176 RQSQA--MQESVITQRGDRFVIPVKASHKDAIP-GIVHDTSTSGATLYVEPHTVVERNNR 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E AEE IL LTAEIA+ ++ L+ V +DLA ARA ++ W+ G P
Sbjct: 233 LRQLQRQEQAEEAVILGRLTAEIAEVLPTLERLLAIVTTLDLAAARARYSFWLGGNVPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
++ + + ++HPLL+ +A
Sbjct: 293 VQRT---AGEVVTLRSLRHPLLVWQQQHEQGSAV-------------------------- 323
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPID+ ++ + RVV ITGPNTGGKT ++KTLGLA+LM+KAGLY+ A+ +PWFD I
Sbjct: 324 --VPIDLMIQPQLRVVAITGPNTGGKTVTLKTLGLAALMAKAGLYVAAREPVEIPWFDQI 381
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
LADIGD QSL+Q+LSTFSGHI RIV IL+ V+ +SLVL+DE+G+GTDP+EG ALA ++LQ
Sbjct: 382 LADIGDEQSLQQSLSTFSGHIRRIVRILDRVTPDSLVLLDEVGAGTDPTEGSALAIALLQ 441
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
L D L V TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA
Sbjct: 442 TLADAAQLTVATTHFGELKALKYQDDRFENASVEFDDVSLSPTYRLLWGIPGRSNALTIA 501
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G ++ +AQ+ V E +++ L +RR+ E +A AA + + L
Sbjct: 502 RRLGLSDSVVAQAQQRVGGSASE----EVNQVIAGLEAQRRRQEDKATEAAKILVQAEQL 557
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
+ E+ +A L +R L+ ++ + VQ+ + A+ +I V++ + R +A
Sbjct: 558 HAEVARKAGLLKQREQALQQEQERAVQEAIAQARREIAQVIKQLQ---RGPTAQG----A 610
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
+++ + AI P + F PQ G++V + LG + A V+ P +D +
Sbjct: 611 QQATQNLNAIATRQLPSQ--QAAPKPKPGFQPQVGDRVRIPRLG-QTAEVLTAPDEDGEM 667
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V++G M++ V ++ + K + A + P ++
Sbjct: 668 TVRFGLMKMTVALEDVESLQGEKPERPPK-------------PPKAVAEMPPPPPAPAIR 714
Query: 676 TSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
TS+N++D+RG RV EA L+ A+A E+ L++IHG GTG +++ + L+ HP+V++
Sbjct: 715 TSRNTVDVRGKRVAEAETVLEGAIA--EADGPLWIIHGHGTGKLRQGIHAFLQQHPQVSR 772
Query: 736 YE--QESPMNYGCTVAYI 751
+E +++ G TV ++
Sbjct: 773 FEPAEQADGGTGVTVVHV 790
>gi|427417145|ref|ZP_18907328.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
gi|425759858|gb|EKV00711.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
Length = 818
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 265/758 (34%), Positives = 407/758 (53%), Gaps = 75/758 (9%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L+ L+ ELE++I CID + + DRA+ L IR K + L + L+++
Sbjct: 115 PVLQALVGQLRTYPELEKEIHHCIDDRGKVT-DRANPKLAGIRKNLKNTHDQLHAKLQRI 173
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ +G + + LIT+R R + +KA K +P GI +VS+SGAT ++EP+G VEF
Sbjct: 174 MQR--HSGVLQETLITQRAGRFVIPVKAPQKESIP-GIVHDVSTSGATLYIEPQGVVEFG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E EE + LT ++A +++ LM V +DLA ARA ++ W++ P
Sbjct: 231 NRLRQLERQETREEELVRQRLTEQVAAVSEDLEQLMAIVTTLDLATARARYSLWLEANPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
S + + + ++HP+L+ P TV
Sbjct: 291 RFSEANERTV-----LRQLRHPILVWQQ-------RHEEGP----------TV------- 321
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP DI + + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ LPWFD
Sbjct: 322 ----VPTDITMRPDIRVVAITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWFD 377
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE------------------SLVLID 355
+LADIGD QS+EQ+LSTFSGHI RI IL+ + + SLVL+D
Sbjct: 378 QVLADIGDEQSIEQSLSTFSGHIRRIGRILDAIGADGVDDAGNTASMGTAHPTNSLVLLD 437
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 415
E+G+GTDP+EG ALA S+LQ+L + L V TTH+ +L LK +D RFENA+ EF +L
Sbjct: 438 EVGAGTDPTEGSALAISLLQHLANHTRLTVATTHFGELKALKYQDERFENASVEFDDVSL 497
Query: 416 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 475
PTYR+LWG G SNAL IA+ +G + +I AQ V +Q +++ L +R
Sbjct: 498 SPTYRLLWGIPGRSNALTIARRLGLNPNVIDTAQTYVG----VSKQDDVNQVIAGLEAQR 553
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
++ E QA+ AA + A+ L +IE +A + K ++ + +Q + AK +I TV
Sbjct: 554 KRQEDQAKQAAGIVAQAEALKTDIERKAAAIKEWERSQKLEQEKAIQAAVAEAKAEIATV 613
Query: 536 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 595
++ + A A + + + E + + + + P ++ + + P+ GE+V +
Sbjct: 614 IRQLQKGNPTAQAAQRATELVEDIAQQQQVPKGNHP------AKKVITDYKPKLGEKVRL 667
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
LG + A VV P D V V++G M+ V ++I + K A P K E
Sbjct: 668 IGLGGQTAEVVGEPDSDGKVAVRFGLMKTIVDLSDIESLTGQK---TATSKPAAEKAPEK 724
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 715
R++ + E + P V+TSKN++DLRGMRV EA L+ +A +S +++IHG G
Sbjct: 725 RRTTVKVAKKEPEA--PAVRTSKNTIDLRGMRVAEAEADLENFIA--KSTGPIWIIHGHG 780
Query: 716 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
TG +K V E L+ HP+V ++ +++ G TVA +
Sbjct: 781 TGKLKRGVREFLKRHPQVRSFDNAEQADGGTGVTVAQV 818
>gi|428773368|ref|YP_007165156.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
gi|428687647|gb|AFZ47507.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
Length = 822
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/771 (33%), Positives = 419/771 (54%), Gaps = 94/771 (12%)
Query: 14 SPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
SP L EL+++ ELE++I +CID + I +RAS L IR + ++ L S +++
Sbjct: 114 SPTLKELVESLRTFPELEQEIHYCIDDRGEIT-ERASPQLGEIR----QKIKGLRSKIQQ 168
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
I Q G + +P++T+R R + +KASH + GI + S++G+T + EPK +
Sbjct: 169 TLQNIIQRNGNALQEPVVTQRGDRFVLPVKASHSGQI-SGIVHDTSTTGSTLYTEPKSII 227
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ N E EE IL LT ++A+ E++ L+ +DLA A+A ++ W++G
Sbjct: 228 DLGNRLQTSRGQEKREEEKILRTLTEKVAEVWEELEQLLAIATALDLATAKARYSMWLEG 287
Query: 191 VCPILSSQSHVSFDS--SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
P V F S +I + ++HPLL+ + S A
Sbjct: 288 NPP-----QFVDFQSQENITLRQLRHPLLIWQQKKEESGAV------------------- 323
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPID+ ++ +TRVV ITGPNTGGKT ++KT+G+ +LM+K G+++PAK+
Sbjct: 324 ---------VPIDVLIKSDTRVVAITGPNTGGKTVTLKTIGITALMAKVGIFIPAKDPVL 374
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS--------------------- 347
+PWFD +LADIGD QSLEQNLSTFSGHI RI+ I++ ++
Sbjct: 375 IPWFDQVLADIGDEQSLEQNLSTFSGHIRRIIRIMDALNGSTPIQNPDDDSPTVETQHGL 434
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
SLVL+DE+G+GTDP+EG A+A +IL++L + L + TTHY +L LK D+RFENA+
Sbjct: 435 SNSLVLLDEVGAGTDPTEGSAIAIAILKHLAEHNLLTIATTHYGELKTLKYNDSRFENAS 494
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 467
EF +L+PTYR+LWG G SNA+ IA+ +G +I +Q+L + Q L
Sbjct: 495 VEFDDVSLQPTYRVLWGIPGRSNAIIIAQRLGLPSDVIADSQELAGGFSQDVNQ-----L 549
Query: 468 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 527
L +RR+ E + + A L ++ Y+E+E +A L R LK+++ Q VQ+ L
Sbjct: 550 IGELENQRREQEEKHKQAQDLLSKTERFYQEVEAKATSLQDRERDLKSQQEQAVQKMLLD 609
Query: 528 AKVQIDTVVQDFENQLRDASADEINS---LIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
AK QI V+++ + + + D + L K + + I ++ + SS
Sbjct: 610 AKSQIAQVIKELQKKGNPTAQDAQQARENLEKIGDRFLTPIQKSRK-----------KSS 658
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 644
+ P+ GE+V + SLG + A V++V + + ++G M++ + +I + + +
Sbjct: 659 YKPKVGERVRILSLG-QTAEVLDVDETAEQLSARFGMMKMVLPFTDIESLDGKRFEKETP 717
Query: 645 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWES 704
P ++++ Q ++N+ A PRV+ KN++D+RG RV A L+ A+A
Sbjct: 718 PKTEVKQKTPKVQ-----NNNQTAKTTPRVRVEKNTVDIRGQRVHLAEPVLERAIASATE 772
Query: 705 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 752
+L+++HG GTG ++ V E L+ HP+V+KYE +P N G T+AY+K
Sbjct: 773 LGLLWIVHGKGTGSLRNGVHEFLQRHPQVSKYEI-APRNEGGAGVTIAYLK 822
>gi|409991618|ref|ZP_11274864.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
gi|291572107|dbj|BAI94379.1| MutS2 family protein [Arthrospira platensis NIES-39]
gi|409937528|gb|EKN78946.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
Length = 816
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/756 (34%), Positives = 408/756 (53%), Gaps = 75/756 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L++ ELE++I CID + + DRAS + IRA + + + +L+ +
Sbjct: 117 LTSLVEELRTYPELEQEIHRCIDERGEVT-DRASVKMGEIRARLQSTRDRIYQILQGILQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ QA + + ++T+R R + +KA K +P GI + S++GAT ++EP V NN
Sbjct: 176 RKAQA--VQQQIVTQREGRFVIPVKAPQKDAIP-GIVHDASTTGATVYVEPHPIVALNNE 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
++ +E E AI LT ++A +++ L+ V IDLA A+A ++ W+ P
Sbjct: 233 LRQIQRAEQTEAEAIRRSLTEQVAAVVPDLEKLLAIVTTIDLALAKARYSYWLKANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
S +IN+ ++HPLL+ + + E V
Sbjct: 293 IDPGDTS--ETINLRQLRHPLLI----------------WQQEYEQGPEVV--------- 325
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
PIDI + + RVV ITGPNTGGKT ++KT+GLA++M+K GL++PA+ +PWF +
Sbjct: 326 ---PIDITINPQIRVVAITGPNTGGKTVTLKTIGLAAIMAKVGLFIPAREPVEMPWFGQV 382
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------------ESLVLIDEIGSGT 361
LADIGD QS+EQ+LSTFSGHI RI IL+ + +SLVL+DEIG+GT
Sbjct: 383 LADIGDEQSIEQSLSTFSGHIRRITRILQAIGEPMRVTEAGEYDRICQSLVLLDEIGAGT 442
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA ++LQ DR L V TTH+ DL LK KDTRFENA+ EF+ +L+PTYR+
Sbjct: 443 DPTEGTALAIALLQTFADRTRLTVATTHFGDLKALKYKDTRFENASVEFNDASLQPTYRL 502
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA+ +G D I++ A V + Q + L +RR+ E++
Sbjct: 503 LWGIPGRSNALKIAERLGLDHDIVKLAGSYVGGGDEDVNQ-----VIAGLEAQRRQQETK 557
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A A+ L E L+ E+ + A L R LK + +++++ L AK +I V++ +
Sbjct: 558 AIAASQLLKETERLHGELAERAISLQERERQLKQAQEKEIKETLLQAKGEIAKVIRRLQ- 616
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
Q + +AD +++ + + AI E + P + +F P+ G+++ + +G +
Sbjct: 617 QGKPTAADA-----QKATATLDAIAENYLPSR--QATPAPLPNFMPKVGDRIRIPRIG-Q 668
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK---RKNAANPAPRLRKQQEDRQS 658
A ++ P D++ + V++G M++ V I + K K +A P + ++
Sbjct: 669 TAEILSGPDDNNQLTVRFGIMKMTVGLGEIESLDGQKVELPKTSATP--------KADKT 720
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 718
S ++ E S P V+T KN+LDLRG RV EA ++D L L++IHG GTG
Sbjct: 721 HSPVTNKPEPSKLPNVRTDKNTLDLRGKRVSEAETEIDRTLGQILDFGALWIIHGKGTGQ 780
Query: 719 VKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
++ V E+L+ HP+V ++E S + G T+AY+K
Sbjct: 781 LRRGVHELLKEHPQVERFELASNPDGGAGVTIAYLK 816
>gi|172036803|ref|YP_001803304.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. ATCC 51142]
gi|354554613|ref|ZP_08973917.1| MutS2 protein [Cyanothece sp. ATCC 51472]
gi|171698257|gb|ACB51238.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353553422|gb|EHC22814.1| MutS2 protein [Cyanothece sp. ATCC 51472]
Length = 817
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/771 (33%), Positives = 401/771 (52%), Gaps = 104/771 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ + ELE+ I CID + + DRAS L IR K + + L+ +
Sbjct: 117 LTDLVADIRTYPELEKAIHHCID-EAGKVADRASPKLGEIRHNLKEIRDRIYEKLQNIMQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
Q + G I + +IT+R R + +KA K +P GI + S +G T+++EP V+ N
Sbjct: 176 Q--KGGAIQETVITQRGDRFVLPVKAGQKEQIP-GIIHDTSGTGGTFYIEPNSVVQMGNK 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E EE AIL LT ++A+ +++YL+ +DLA ARA ++ W+ G P
Sbjct: 233 RRQYLRQEEREEEAILRSLTEQVAEVAEDLEYLLAIATVLDLATARARYSFWLGGNAP-- 290
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ +I + + HPLL+ +P+
Sbjct: 291 ---RFIEDTETITLRQLHHPLLV------WQERHEQGSPV-------------------- 321
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPI++++ + RV+ ITGPNTGGKT ++KT+GLA+LM+K GL++PAK LPWF+ I
Sbjct: 322 --VPINVQINPDIRVIAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPVELPWFEQI 379
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVS-------------------------RES 350
LADIGD QS+EQNLSTFSGHI RIV ILE + S
Sbjct: 380 LADIGDEQSIEQNLSTFSGHIRRIVRILEALEGTGDPPLTNGGGEQKTVLSETPHTPHPS 439
Query: 351 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 410
L+L+DE+G+GTDP+EG ALA ++L +L D L + TTHY +L LK +D+RFENA+ EF
Sbjct: 440 LILLDEVGAGTDPAEGSALAIALLHHLADHAQLTIATTHYGELKALKYEDSRFENASVEF 499
Query: 411 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 470
TL PTYR+LWG G SNAL+IA+ +G D II A+ + L + +++
Sbjct: 500 DDRTLSPTYRLLWGIPGRSNALSIAQRLGLDVDIIDEAKTRIGGLSQD-----VNDVIAG 554
Query: 471 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 530
L +RR+ E +A+ A L E Y E+ ++A L +R LK + Q+VQ+ + AK
Sbjct: 555 LEAQRREQEEKAQEAQKLLQETEKFYTEVSEKATALQQREQDLKRYQEQEVQKAIAEAKE 614
Query: 531 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
+I V++ + + + +++ AI I + P S+ PQ G
Sbjct: 615 EIAQVIRSLQKGKKSSQK------AQQATEAITNISQRQLPK-----KAKPKVSYQPQVG 663
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA------- 643
E++ + +LG + A V+ V +D+ V+V++G M++ V +I + K +
Sbjct: 664 EKIRLSNLG-QTAEVLAVSPEDEEVMVRFGLMKMTVSFKDIESLDGQKVETKVKEKKQPI 722
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWE 703
P P+ K ++ P ++TS+N++D+RG RV EA L+ A+A
Sbjct: 723 TPPPQPSKPKDV----------------PAIRTSRNTIDIRGSRVAEAEADLENAIAQAT 766
Query: 704 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
VL++IHG GTG +++ V E L+ HP++ ++E S G T+AY K
Sbjct: 767 ESGVLWIIHGKGTGKLRQGVHEFLKGHPQIHRFELASQKEGGSGVTLAYFK 817
>gi|434391179|ref|YP_007126126.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
gi|428263020|gb|AFZ28966.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
Length = 804
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 265/756 (35%), Positives = 419/756 (55%), Gaps = 84/756 (11%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+L L+++ E+E++I CID + + DRAS L IR+ R + + L ++
Sbjct: 115 PVLSALVEDIRTYPEIEQEIHRCIDERGQVS-DRASTTLSNIRSSLRQIRSQITQKLQNI 173
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L++ QA + + LITKR R + +KA K +P GI + S+SGAT ++EP
Sbjct: 174 LQR------QANAVQEQLITKRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSV 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V N +L+ E AEETAI L+ +IA ++++L+ +DLA ARA ++ W+
Sbjct: 227 VPLGNQLRQLTVKEQAEETAIRRQLSEQIAAVTPDLEHLLSVATILDLACARARYSYWLK 286
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P + +I + + HPLL+ A
Sbjct: 287 ANPPRFIQRGE---GETITLRQLHHPLLVWQFAHEQGTAV-------------------- 323
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP+D+ ++ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +
Sbjct: 324 --------VPVDLVIKPQIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEI 375
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDILE----LVSRESLVLIDEIGSGTD 362
PWFD +LADIGD QSL+Q+LSTFSGHI SRI+D L L SLVL+DE+G+GTD
Sbjct: 376 PWFDQVLADIGDEQSLQQSLSTFSGHIRRISRIIDALSNTQALTPHSSLVLLDEVGAGTD 435
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P+EG ALA ++LQYL D L++ TTH+ +L LK +D RFENA+ EF E+L PTYR+L
Sbjct: 436 PAEGSALAIALLQYLADHTQLSIATTHFGELKALKYQDERFENASVEFDEESLSPTYRLL 495
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
WG G SNAL IA+ +G + +++++A+ + + Q + L +RR E++A
Sbjct: 496 WGIPGRSNALTIARRLGLNAEVVEQAKTKIGGATEDVNQ-----VIAGLEAQRRLQETKA 550
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
A L ++ LY E+ +A L R AHL+ ++ Q +QQ L AK +I V++ +
Sbjct: 551 AEAEQLLQQVQRLYTEVSQKAAQLQEREAHLRQQQEQSIQQALVQAKSEIAQVIR----R 606
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
L+ S ++ +++ +A+ I + H F PQ G+++ + L ++
Sbjct: 607 LQQGSTTAQDA--QQATNALTQIAKNH-----LPPPPKPKPGFKPQVGDRIRIPRL-EQT 658
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
A V+ P +D + V++G M++ VK +I + K A P ++ +E ++
Sbjct: 659 AEVISAPDEDGELSVRFGIMKMNVKLEDIESLDGQK----AEPVTTKKQVKETPRN---- 710
Query: 663 SSNEEASYGPR----VQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 718
S ++A P+ ++TS+N++DLRG RV +A L+ A+A + R L++IHG GTG
Sbjct: 711 SPKQDAPTTPQSALAIRTSQNTIDLRGSRVADAEIVLERAIAQAQGR--LWIIHGHGTGK 768
Query: 719 VKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
+++ V L+ +PRV ++E +P + G TVAYI+
Sbjct: 769 LRQGVHTFLQQNPRVNRFEPAAPEDGGTGVTVAYIE 804
>gi|428200893|ref|YP_007079482.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
gi|427978325|gb|AFY75925.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
Length = 824
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/774 (34%), Positives = 413/774 (53%), Gaps = 105/774 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ E+E++I CID + DRAS L IRA K E DS+ +K+ +
Sbjct: 117 LTELVAEIRTYPEIEQEIHRCID-DAGKVADRASPKLASIRARLK---EVRDSIYQKLQS 172
Query: 76 QI-FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ Q G + +P+IT+R R + +KA K +P GI + SS+GAT ++EP V N
Sbjct: 173 ILQRQGGAVQEPVITQRGDRFVIPVKAPQKDQIP-GIIHDTSSTGATLYIEPNAIVNLGN 231
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+ E AEE AIL LT +A E +++YL+ +DLA ARA ++ W++G P
Sbjct: 232 QLRQYRRQEQAEEEAILRALTERVAAVESDLEYLLAVATILDLATARARYSLWLEGNAP- 290
Query: 195 LSSQSHVSFDSS--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
+ F+ I + ++HPLL+ + + +DV
Sbjct: 291 ----RFIDFEEGEPITLRQLRHPLLVWQ----------HQHEQGADV------------- 323
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VPI+++++ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ LPWF
Sbjct: 324 -----VPINVQIDPKIRVVAITGPNTGGKTVALKTLGLAALMAKVGLFIPAREPVELPWF 378
Query: 313 DLILADIGDHQSLEQNLSTFSGHI---------------------------------SRI 339
+ +LADIGD QS+EQ+LSTFSGHI S
Sbjct: 379 EQVLADIGDEQSIEQSLSTFSGHIRRIIRIIDTLKAEFSSSRVQKDPDDNRQAQEWDSEA 438
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ ++ + +SL+L+DE+G+GTDP+EG ALA ++L+YL D L + TTHY +L LK +
Sbjct: 439 IGKIQRTNNQSLILLDEVGAGTDPAEGSALAIALLKYLADNALLTIATTHYGELKALKYQ 498
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++I++ A+K V E
Sbjct: 499 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALAIAQRLGLGQEIVEEARKRVGGYSEEI 558
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
Q L +RR+ E +A+ A+ L + Y EI ++A L R LK + +
Sbjct: 559 NQ-----TIAGLEAQRREQELKAKEASQLLQQTERFYTEISEKAASLQERERELKQYQER 613
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+VQ+ + AK +I V++ QL+ S N+ +++ AI I E P E
Sbjct: 614 EVQKAIAQAKAEIAKVIR----QLQQGSPTAQNA--QKATEAIGQIAETRLPK-----PE 662
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
++S++ P+ GE++ + +LG + A V+ + D+ V V++G M++ V I + K
Sbjct: 663 KHSSNYLPKVGERIRLPNLG-QTAEVLNLA--DEEVTVRFGLMKMTVPLTEIESLDGKK- 718
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
+ + R + V+TS+N++DLRG RV EA +L+ A+
Sbjct: 719 ---------VEIPAKPRAVPPPPAQPATPKPPVTVRTSQNTIDLRGSRVAEAESELERAI 769
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ VL++IHG GTG +++ + E L++HP+V ++E ++ G T+AY+
Sbjct: 770 SKATESGVLWIIHGKGTGRLRQGIHEFLQHHPQVERFELALQNEGGAGVTIAYL 823
>gi|427723948|ref|YP_007071225.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
gi|427355668|gb|AFY38391.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
Length = 801
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/743 (33%), Positives = 410/743 (55%), Gaps = 70/743 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
LL L++ ELE++I CID + + DRAS L IR + K + + L ++
Sbjct: 120 LLFLVEQLRTYPELEKEIHHCIDDRGDVT-DRASPKLAGIREKMKGARDGIYQTLNRIMQ 178
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ G I + +IT+R R + +KA K +P GI ++SS+G+T+++EPK ++ N
Sbjct: 179 R--HGGSIQEAVITQRGDRFVLPVKAGQKEHIP-GIVHDISSTGSTFYVEPKAIIDLGNR 235
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ + E E IL LT ++A+ +++ L+ IDLA AR+ ++ W++ P
Sbjct: 236 LRQATKQEQREIEIILRQLTEKVAEVVEDLEKLLAIATTIDLATARSRYSHWLEANPPKF 295
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ + + + HPLL+ + E E+
Sbjct: 296 TKPEQPTM-----LRKLHHPLLVWQ---------------QKQEEGDEV----------- 324
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPI++++ + +VV ITGPNTGGKT ++KTLG+A+LM+K GL++PA LPWF+ +
Sbjct: 325 --VPINVQIRPDIKVVAITGPNTGGKTVTLKTLGMAALMAKVGLFIPAIAPVELPWFNHV 382
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATS 372
LADIGD QSL+Q+LSTFSGHI R+ I+E + E +LVL+DE+G+GTDP+EG ALA +
Sbjct: 383 LADIGDEQSLQQSLSTFSGHIRRVGRIIETLQAEDENNLVLLDEVGAGTDPTEGSALAIA 442
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
+L+YL D L V TTHY +L LK D RFENA+ EF +LRPTY++LWG G SNAL
Sbjct: 443 LLKYLADHAALTVATTHYGELKALKYDDDRFENASVEFDEYSLRPTYKLLWGIPGRSNAL 502
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 492
IAK +G D ++I AQ L+ + +E+ +L +RR+ E +++ A +L +
Sbjct: 503 AIAKRLGLDEQVIDAAQSLLGNSNTD-----VNEVIAALEAQRREQEQKSQEAEALLKQT 557
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
Y E+ +A DL RR LK + QQVQ+ + AK +I V++ + A
Sbjct: 558 ERFYTEVSSKAADLQRRETELKQAQDQQVQEAIAEAKSEIAQVIRTLQKGKPSA------ 611
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++++ A A+ E + + + + + + P+ GE++ + LG + A V+E+ ++
Sbjct: 612 ---QKAQKATNALGEIAQ--EKLAQPKKKKAGYQPKLGEKIRISKLG-QTAEVIELNEEN 665
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
T++ ++G M++ ++ I + K + A + +Q+ ++ S E +
Sbjct: 666 KTLVARFGIMKMSLQWTEIESLQGQKVE-----AEPKKTKQKTKKKQQPKQSQEVVT--- 717
Query: 673 RVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
V+T N++D+RG R+ +A L+ IA A + V+++IHG GTG ++E V E L++H
Sbjct: 718 -VRTDSNTIDIRGQRIHQAESSLEGAIARATAQGSQVVWIIHGKGTGKLREGVHEFLKHH 776
Query: 731 PRVAKYE--QESPMNYGCTVAYI 751
P++ KY ++ G T+AY+
Sbjct: 777 PQIKKYNIAEQKEGGSGVTIAYL 799
>gi|113476819|ref|YP_722880.1| recombination and DNA strand exchange inhibitor protein
[Trichodesmium erythraeum IMS101]
gi|110167867|gb|ABG52407.1| MutS2 family protein [Trichodesmium erythraeum IMS101]
Length = 857
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 269/799 (33%), Positives = 429/799 (53%), Gaps = 113/799 (14%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
+ S L EL+ + ELE++I CID + + DRAS L IR + R + +D++L
Sbjct: 115 YELSVLPELVADMRTYPELEQEIHRCIDDRGDVT-DRASPKLAGIREKIHRLRDRIDNIL 173
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
+ + + +A I +P+IT+R R + +KA K +P GI + S++G+T ++EP V
Sbjct: 174 RGILQR--KANAIQQPIITQRDDRFVIPVKAPQKDAVP-GIVHDTSTTGSTLYIEPNAVV 230
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
NN +L EE AI LT ++A+ + ++ L+ IDLA ARA ++ W++
Sbjct: 231 NLNNQMRQLQRQAQREEEAIRQALTQKVAEVKEDLDQLLAITTIIDLATARARYSLWLEA 290
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P + + + + + ++HPLL+ + + +NS
Sbjct: 291 TPPQFTD---LDSEQPMTMGQLRHPLLVWQQ--------------QYEQKNS-------- 325
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPID+KV RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA + +LP
Sbjct: 326 ------VVPIDVKVRPPVRVVAITGPNTGGKTVTLKTLGLAALMAKVGLFIPANDPVKLP 379
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILE--------LVSRE------------- 349
WF+ ILADIGD QSLEQ+LSTFSGHI RI+ ILE ++S++
Sbjct: 380 WFEQILADIGDEQSLEQSLSTFSGHIRRIIRILEAIDVSKANIISQKLKVKTQNSKVIDS 439
Query: 350 ----------------------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
+LVL+DE+G+GTDP+EG ALA S+LQYL D
Sbjct: 440 DDFSENENNSEIDNLSGNENLESSNLSSTLVLLDEVGAGTDPTEGSALAISLLQYLADNA 499
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
L V TTH+ +L LK +D RFENA+ EF +L+PTYR+LWG G SNA+ IA +G
Sbjct: 500 LLTVATTHFGELKALKYEDERFENASVEFDSNSLQPTYRLLWGIPGRSNAMTIAGRLGLK 559
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+ II RAQ V + Q + L E+R+K E++A+ A++L E L++E+
Sbjct: 560 QDIIDRAQDYVGDSSEDVNQ-----VIAGLEEQRQKQETKAKEASALLQETESLHQEVAR 614
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN---QLRDASADEINSLIKES 558
+A L R LK + VQ+++ AK +I V+++ + R+A +++
Sbjct: 615 KASALKERERELKLAQEVAVQEKIAEAKAEIARVIRNLQQGPLTARNA---------QKA 665
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+AI I E + P + F P+ G+++ + +G ++A V+ P ++D + V+
Sbjct: 666 TNAINEISEKYLPS---ATPPPKKPGFMPKEGDRIRIPKIG-QIAEVLSAPNENDELTVK 721
Query: 619 YGKMRVRVKKNNIRPIP--NSKRKNAANPAPRLRKQQEDR-QSGSAGSSNEEASYGPRVQ 675
+G M++ V N+R + + +R + L Q+ + +S S + + +S G V+
Sbjct: 722 FGVMKMTV---NLREVESLDGERVESFKKNKNLESQRSKKVESKSKETPPKVSSNGLAVR 778
Query: 676 TSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
TS+NS+D+RG RV +A ++D AL+ +L++IHG GTG +++ + E L+ HP V +
Sbjct: 779 TSQNSIDIRGSRVADAQFEVDRALSKAIEYGLLWIIHGKGTGKLRQGIHEFLQEHPLVER 838
Query: 736 YE--QESPMNYGCTVAYIK 752
YE + G T+A++K
Sbjct: 839 YELAARNDGGSGVTIAHLK 857
>gi|428770493|ref|YP_007162283.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
gi|428684772|gb|AFZ54239.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
Length = 803
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 255/755 (33%), Positives = 411/755 (54%), Gaps = 88/755 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ N ELE++I +CID + I +RAS L AE ++ +++L S +++
Sbjct: 117 LQELVANIRTFPELEQEIHYCIDDRGEIT-ERASPQL----AEIRQKIKSLRSKIQQTLQ 171
Query: 76 QIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I Q G + + +IT+R R + +KA H ++ GI + SS+G+T ++EPK VE
Sbjct: 172 GIIQRYGNALQELVITQRGDRFVLPVKADHSGII-TGIVHDTSSTGSTLYVEPKAVVELG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N N E EE IL L+ ++A++ ++++ L+ +DLA ARA ++ W+D P
Sbjct: 231 NKLQTSRNQEKREEEKILRALSEKVAENWQDLEELLAVATTLDLATARARYSLWLDAYPP 290
Query: 194 ILSSQSHVSF--DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
V F SI + ++HPLL+ E S++
Sbjct: 291 -----EFVDFADGESITLRQVRHPLLVWQERHE---------------EGSQV------- 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
+PID+++ ETRVV ITGPNTGGKT ++KT+G+ +LM+K GL++PAK+ R+PW
Sbjct: 324 ------IPIDVRISPETRVVAITGPNTGGKTVTLKTIGMVALMAKVGLFIPAKSPARIPW 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDIL-ELVSRESLVLIDEIGSGTDPSEGVALA 370
F+ +LADIGD QSL+Q+LSTFSGHI RIV IL E+ SLVL+DE+G+GTDP+EG A+A
Sbjct: 378 FNNVLADIGDEQSLQQSLSTFSGHIRRIVRILDEIKENNSLVLLDEVGAGTDPNEGTAIA 437
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL+YL L + TTHY +L LK D+RFENA+ EF +L+PTYR+LWG G SN
Sbjct: 438 ISILKYLASNNLLTIATTHYGELKSLKYSDSRFENASVEFDDVSLQPTYRLLWGIPGRSN 497
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A+ IA+ +G + I+ A++LV + +EL +L ++R++ E + + A L
Sbjct: 498 AITIAQRLGLNDDIVAEAKELVGGFSAD-----VNELISALEKQRKEQEDKHQQAQDLLT 552
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
+ Y+++E +A L R LK ++ Q+V + L AK QI+ V++ + + + D
Sbjct: 553 KTELFYQQVEAKAISLQARERDLKKEQEQEVHKLLLDAKSQINQVIKGLKQKGSPTAQD- 611
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------------QFGEQVHVKSL 598
AH+ ++ + TP + GE+V + S+
Sbjct: 612 -----------------AHQATENL--GKIGDRFLTPIQKSKSKSSYKPKVGERVRILSI 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G ++A V+ V ++ + ++G M++ + +++ + + + P K++
Sbjct: 653 G-QVAEVLGVDDSNEQISARFGLMKMVIPFSDLESLDGKRWEKPETPV----KEKPPVTP 707
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 718
G E S ++TS+NS+D+RG RV A L+ A+A ++++HG GTG
Sbjct: 708 GKNPVKTETKSPPTAIRTSRNSVDIRGKRVHLAYPILEKAIASATDMGTVWIVHGKGTGS 767
Query: 719 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+++ V E L +HP+V+ YE + G TVAY+
Sbjct: 768 LRQGVHEFLDSHPQVSHYELAPQKEGGAGVTVAYL 802
>gi|428317789|ref|YP_007115671.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241469|gb|AFZ07255.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
Length = 874
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/777 (33%), Positives = 408/777 (52%), Gaps = 68/777 (8%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL ELE++I CID + + DRA+ L IR + ++ + + +L+ +
Sbjct: 126 LQELAAQLRTYPELEQEIHRCIDDRAQVA-DRATPKLAGIRVQMRQLRDRIYQILQGILQ 184
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q+ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V NN
Sbjct: 185 R--QSNAVQEQLITQRSGRFVIPVKAPQKDAIP-GIVHDSSASGATLYVEPHSTVNLNNQ 241
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-- 193
+L E AEE A+ LT ++A + ++ L+ V +DLA A+A ++ W+ P
Sbjct: 242 MRQLLRQEQAEEEAVRRALTEQVAAVKPDLDRLVVVVTTLDLATAKARYSYWLQANPPKF 301
Query: 194 -------ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ + + E ++ LL +LRS +PL + E
Sbjct: 302 IELGEPELAPKNPETEDEEKADEENSENSQLLIPNLRSQITLRQLRHPLLVWQQQHE--- 358
Query: 247 GSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
FPV P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+
Sbjct: 359 -------QGFPVVPVDLTIGPHIRVVAITGPNTGGKTVTLKTLGLAALMAKAGMFVAARE 411
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----------------- 348
LPWFD ILADIGD QSL+Q+LSTFSGHI RI ILE++
Sbjct: 412 PVELPWFDNILADIGDEQSLQQSLSTFSGHIRRISRILEVLHNKSEGESAGEGEENSQFP 471
Query: 349 ---------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+SLVL+DE+G+GTDPSEG ALA ++L+YL L V TTH+ +L LK +
Sbjct: 472 MPHAQFPMPKSLVLLDEVGAGTDPSEGSALAIALLKYLAQHSLLTVATTHFGELKALKYQ 531
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
D+RFENA+ EF +++PTYR+LWG G SNAL IAK +G +I++ AQ V +
Sbjct: 532 DSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLPEIVEEAQTYVGGASQDV 591
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
Q + L +RRK E++AR A L + L+RE+ +A L R LK +
Sbjct: 592 NQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAAALQERERELKIAQEV 646
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
V + + AK +I +++ + S ++ +++ + I + H P
Sbjct: 647 AVNEAIGSAKSEIAQIIRRLQ------SGNQTAQNAQQATETLNQISQKHLPSRQQPAKP 700
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
F P+ G+++ + SLG + A V+ P ++ + V++G M++ VK I + K
Sbjct: 701 --KPGFMPKAGDRIRIPSLG-QTAEVLSGPDANEELSVRFGIMKMTVKLGEIESLDGQKP 757
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR--VQTSKNSLDLRGMRVEEASHQLDI 697
+ A A + Q + + +++E A P ++T+ NS+DLRG RV +A ++D
Sbjct: 758 ETKAQLAKAAAQAQALATAKAKQAASEPAKPNPEIAIRTANNSIDLRGARVSDAEIEIDR 817
Query: 698 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
AL+ VL++IHG GTG ++ V E L NHP+V+++E S G TV Y+K
Sbjct: 818 ALSKAVEYGVLWIIHGKGTGQLRRGVHEFLANHPQVSRFELASQKEGGAGVTVVYLK 874
>gi|218441797|ref|YP_002380126.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7424]
gi|218174525|gb|ACK73258.1| MutS2 family protein [Cyanothece sp. PCC 7424]
Length = 803
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/755 (34%), Positives = 412/755 (54%), Gaps = 90/755 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
L EL+ + E+E+ I CI D K + DRAS L IR + R+R L +
Sbjct: 119 LKELVADVRTYPEIEQDIHRCIEEDGK---VSDRASPRLREIRGQIKVVRERIYRKLQDI 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+++ Q+G I + +IT+R R + +KA K + GI + SS+GAT ++EP
Sbjct: 176 MQR------QSGAIQESVITQRGDRFVLPVKAPQKDQI-SGIIHDSSSTGATLYIEPHSV 228
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE N + E EE IL LT +IA+ + +++YL+ +DLA AR+ ++ W+
Sbjct: 229 VEQGNQLRQHHRQEQIEEEVILRGLTQQIAQVKEDLEYLLAVATTLDLAVARSRYSWWLQ 288
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P + I + ++HPLL+ +N E V
Sbjct: 289 ANPP-----RFIDSTEPITLRQLRHPLLVWQ-------------------QNHEQGVEV- 323
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPI+++V+ + RVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK L
Sbjct: 324 --------VPINVQVDPKIRVVAITGPNTGGKTVTLKTIGLATLMAKAGIFIPAKVPVEL 375
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS----------RESLVLIDEIGS 359
PWF+ ILADIGD QSL+Q+LSTFSGHI R++ I+E ++ SLVL+DE+G+
Sbjct: 376 PWFEEILADIGDEQSLQQSLSTFSGHIRRMIRIIEALNGSSPEETKPPASSLVLLDEVGA 435
Query: 360 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 419
GTDP+EG ALAT++L+YL D+ L + TTHY +L LK +D RFENA+ EF+ +TL PTY
Sbjct: 436 GTDPAEGSALATALLKYLADQAQLTIATTHYGELKALKYQDERFENASVEFNDQTLSPTY 495
Query: 420 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 479
R+LWG G SNAL IA +G +II+ A+ V + Q + L E+RR+ E
Sbjct: 496 RLLWGIPGRSNALTIAGRLGLRPEIIEEARTRVGGFSEDINQ-----VIAGLEEQRREQE 550
Query: 480 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+A+ A+ L E Y E+ ++A L +R LK + Q++Q+ + AK +I V++
Sbjct: 551 QKAKEASKLLQETERFYAEVSEKANALQQREKDLKQLQEQEIQKAIAQAKAEIAQVIR-- 608
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
QL+ + N+ +++ A+ I E P S+ P+ GE+V + LG
Sbjct: 609 --QLQQGNTTAQNA--QKATDALTQIAERQLPKQKHP-----PISYRPKVGEKVRIPGLG 659
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
+ A V+ + + + V V++G M++ V +I + K + Q++ + +
Sbjct: 660 -QTAEVLSLSEESEEVSVRFGIMKMTVPFTDIESLDGKK----------VETQEKPKPAP 708
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVV 719
+ + P ++TS+N++D+RG RV EA L+ A+A +L+VIHG GTG +
Sbjct: 709 ANPAPPPPPKSSPVIRTSQNTIDIRGSRVAEAEADLEKAIAKATESGILWVIHGKGTGKL 768
Query: 720 KERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 751
++ V E L+ HP+V + E +P N G T+AY+
Sbjct: 769 RQGVHEFLQRHPQVKRLEL-APQNEGGSGVTIAYL 802
>gi|354567326|ref|ZP_08986495.1| MutS2 protein [Fischerella sp. JSC-11]
gi|353542598|gb|EHC12059.1| MutS2 protein [Fischerella sp. JSC-11]
Length = 828
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 256/778 (32%), Positives = 402/778 (51%), Gaps = 109/778 (14%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ ELE++I CID + + DRAS+ L IR E ++ + L +
Sbjct: 117 LTELVAELRTYPELEQEIHRCIDERGQVS-DRASQKLADIRTELRKLRNQITQKLHNIIQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + +IT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKSNAVQEQIITQRGDRYVIPVKAPQKDAIP-GIVHDTSASGATLYIEPNSIVPLGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-I 194
+L E AEE AI LT ++A+ + +++ L+ +DLA A+A ++ W+ P
Sbjct: 233 LRQLVRREQAEEEAIRRALTEQVAEVKPDLEKLLAITTTLDLATAKARYSFWLQANPPRF 292
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
++ Q+ + I + ++HPLL+ A
Sbjct: 293 INRQT----NEYITLRQLRHPLLVWQQQHEQGQAV------------------------- 323
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VP+D+ V+ E +VV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ LPWFD
Sbjct: 324 ---VPVDLLVQPEIKVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWFDQ 380
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE------------------------- 349
+LADIGD QSL+QNLSTFSGHI RI ILE + +
Sbjct: 381 VLADIGDEQSLQQNLSTFSGHIRRISRILEAIDKPLDGELGAPTTDREWGLGAMGRLGDG 440
Query: 350 ------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
+LVL+DE+G+GTDP+EG ALA ++L+YL D L + TTH+ +L LK
Sbjct: 441 EKDCTPPHHQSFALVLLDEVGAGTDPAEGSALAIALLRYLADHAQLTMATTHFGELKALK 500
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
+D RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++I++A+ +
Sbjct: 501 YQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAIARRLGLKAEVIEQAKTNLGGSTD 560
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E Q + L +RR+ E++A A L + LY+E+ +A +L R L+A +
Sbjct: 561 EVNQ-----VIAGLEAQRRRQETKAAQAQDLLQQAERLYKEVSAKAANLQEREQTLRASQ 615
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF-- 575
VQQ + A+ +I V++ + A K+++ A A+ H+ + F
Sbjct: 616 EIAVQQAIAQARSEIAQVIRRLQQGTPTA---------KDAQQATNAL---HQIAEKFIP 663
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ P+ G+++ + LG + A V+ P +D + V++G M++ VK ++ +
Sbjct: 664 QPPPKPKQGYIPKEGDRIRIPKLG-QTAEVLTAPDEDGELTVRFGIMKMTVKLEDVESLD 722
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K + A P A + P ++TSKN++D+RG RV +A L
Sbjct: 723 GKKAEPVAKAKPT-----------PAATPVTPTQPAPAIRTSKNTVDIRGRRVADAELVL 771
Query: 696 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
D A++ E+ +++IHG GTG +++ V L+ HPRV++YE ++S G TVAY+
Sbjct: 772 DKAIS--EATGPIWIIHGHGTGKLRQGVHAFLQQHPRVSRYEAAEQSDGGTGVTVAYV 827
>gi|427708044|ref|YP_007050421.1| MutS2 protein [Nostoc sp. PCC 7107]
gi|427360549|gb|AFY43271.1| MutS2 protein [Nostoc sp. PCC 7107]
Length = 796
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 256/746 (34%), Positives = 399/746 (53%), Gaps = 77/746 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ + ELE++I CID + I+ DRAS+ L IR + +R L S + +
Sbjct: 117 LTDLVADLRTYPELEQEIHRCIDERG-IVADRASQKLGEIRDDLRR----LRSQINQKLH 171
Query: 76 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I QA + + LIT+R R + +KASHK +P GI + S+SG T ++EP V
Sbjct: 172 NILQAKSNAVQEQLITQRGDRFVIPVKASHKDAIP-GIVHDSSTSGVTLYVEPSSIVPMG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + E AEE A+ +LT ++A +++ L+ V +DLA AR+ ++ W+ P
Sbjct: 231 NQLRQTLKREQAEEEAVRRILTEQVAAVTPDLERLLAIVTTLDLAAARSRYSYWLKANPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + + ++HPLL+ +G
Sbjct: 291 RFINREEQEI---VTLRQLRHPLLIWQQQHE--------------------------QGH 321
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
S +P+D+ + +VV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD
Sbjct: 322 S--VIPVDLLISPHIKVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPWFD 379
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE------SLVLIDEIGSGTDPSEGV 367
ILADIGD QSL+Q+LSTFSGHI RI IL + E SLVL+DE+G+GTDP+EG
Sbjct: 380 QILADIGDEQSLQQSLSTFSGHIRRISRILNALEHEVENQPNSLVLLDEVGAGTDPAEGS 439
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA ++LQ+L + L + TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G
Sbjct: 440 ALAIALLQHLAEHAQLTIATTHFGELKALKYEDARFENASVEFDEATLSPTYRLLWGIPG 499
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA +G ++++ A+ V E Q + L +RR+ E++A A
Sbjct: 500 RSNALAIALRLGLKPEVVENAKTQVGEASDEVNQ-----VIAGLEAQRRRQETKAAEAQK 554
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L + LY+E+ D+A L+ R L+ + VQQ + AK +I V++ + A
Sbjct: 555 LLQQAERLYKEVSDKAASLEEREKSLRVSQEVAVQQAIAQAKGEIAQVIRRLQQGTPTAQ 614
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
+++ +A+ I + ++P + + F P+ G+++ + G + A V+
Sbjct: 615 D------AQQATNALNQITQKYQP----AAAAKPKVGFMPKVGDRIRISQFG-QTAEVLT 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
P +D + V++G M++ VK +I + K A P +Q + +
Sbjct: 664 APDEDGELNVRFGIMKMTVKLPDIESLDGQK----AEPIV--------KQKPTPTPTTPP 711
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
P ++TSKN++DLRG RV +A +LD A++ E+ +++IHG GTG ++ V L
Sbjct: 712 PQAAPAIRTSKNTVDLRGKRVADAEIELDKAIS--EANGPIWIIHGHGTGKLRLGVHAFL 769
Query: 728 RNHPRVAKYE--QESPMNYGCTVAYI 751
R HPRV+ YE + + G T+A I
Sbjct: 770 RQHPRVSSYEPAESADGGSGVTIAQI 795
>gi|427731199|ref|YP_007077436.1| MutS2 family protein [Nostoc sp. PCC 7524]
gi|427367118|gb|AFY49839.1| MutS2 family protein [Nostoc sp. PCC 7524]
Length = 822
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 263/774 (33%), Positives = 407/774 (52%), Gaps = 104/774 (13%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L EL+ + ELE++I CID + + DRAS+ L IR E +R L S + +
Sbjct: 115 PVLNELVADLRTYPELEQEIHRCIDERGQVT-DRASQKLGEIRTELRR----LRSQITQK 169
Query: 74 AAQIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
I QA G + + +IT+R R + +KA K +P GI + S+SGAT ++EP V
Sbjct: 170 LQNILQAKSGAVQEQIITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSIVP 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E AEE AI +LT +IA + +++ L+ V +DLA ARA ++ W++
Sbjct: 229 MGNQLRQTVRREQAEEEAIRRILTEQIAAVKPDLERLLAIVTTLDLATARARYSLWLNAN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P S+ I + ++HPLL+ +P+
Sbjct: 289 PPRFISREEQEI---ITLRQLRHPLLVWQQ------HHEQGHPV---------------- 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
+P+D+ + +VV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PW
Sbjct: 324 ------IPVDLLISPHIKVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPW 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILE--------------------------- 344
F+ ILADIGD QSL+Q+LSTFSGHI RI IL
Sbjct: 378 FEQILADIGDEQSLQQSLSTFSGHIRRISRILNALGTDDRGQVTGDREQVTGDRGEEFLL 437
Query: 345 -----LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
L + SLVL+DE+G+GTDP+EG ALA ++LQYL D L + TTH+ +L LK +
Sbjct: 438 TPHSPLPTPHSLVLLDEVGAGTDPTEGSALAIALLQYLADHAQLTIATTHFGELKALKYE 497
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++I++A+ V E
Sbjct: 498 DARFENASVEFNEATLSPTYRLLWGIPGRSNALAIALRLGLKPEVIEQAKTQVGEATDEV 557
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
Q + L ++RR+ E++A A L + LY+E+ +A L+ R L+A +
Sbjct: 558 NQ-----VIAGLEDQRRRQETKAAEAQKLLQQAERLYKEVSAKAAALEEREQSLRASQEV 612
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
VQQ + AK +I V++ Q +A E +++ +A+ I + ++P +
Sbjct: 613 AVQQAIAQAKGEIAKVIRRL--QQGTPTAQE----AQQATNALNQIAQTYQP----AAPP 662
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
F P+ G+++ + G + A V+ P +D V++G M++ VK +I + K
Sbjct: 663 KPKVGFMPKVGDRIRLSKFG-QTAEVLTAPDEDGEFSVRFGIMKMMVKLEDIESLDGQK- 720
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
A P + + + ++TS+N++DLRG RV +A LD A+
Sbjct: 721 ---AEPVVKPKAAPAAIAAPPQPVLA--------IRTSQNTVDLRGKRVADAEILLDKAI 769
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ E++ +++IHG GTG +++ V L+ HPRV++YE ++S G T+AYI
Sbjct: 770 S--EAQGQIWIIHGHGTGKLRQGVHTFLQQHPRVSRYEAAEQSDGGSGVTIAYI 821
>gi|284929397|ref|YP_003421919.1| MutS2 family protein [cyanobacterium UCYN-A]
gi|284809841|gb|ADB95538.1| MutS2 family protein [cyanobacterium UCYN-A]
Length = 810
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/756 (33%), Positives = 400/756 (52%), Gaps = 87/756 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLK 71
L +L+ N ELE+ I +C+D I + AS L L+R R + L S++
Sbjct: 119 LKKLVNNIKTYPELEQTIRYCVDENGDIT-EHASSKLSKIRLLLRELRNEIYQKLQSIIN 177
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
K +AG I + LIT+R +R + +K K +P GI + S++G T ++EP V+
Sbjct: 178 K------KAGAIQESLITQRNNRFVIPVKTLQKDQIP-GIVHDTSNTGMTVYIEPSYIVD 230
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + E EE IL LT +IA+ +KYL++ + ++DLA ARA ++ W+ G
Sbjct: 231 IGNKYCQYLRQETIEEIVILRQLTEKIAEVAESLKYLVEAIQKLDLATARARYSLWLGGN 290
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + +I + + HPLL+ + +
Sbjct: 291 IP-----QFIEEGETIILRKLYHPLLIWQQKK--------------------------EQ 319
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
G+ VPIDI++ + VV ITGPNTGGKT ++KTLGLA+LM+K GL++PA + +LPW
Sbjct: 320 GVQ--VVPIDIQINSKINVVSITGPNTGGKTVTLKTLGLAALMAKVGLFIPAVSPVKLPW 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----------------ESLVLID 355
F +LADIGD QS+ QNLSTFS HI RI+ IL+ VS SLVL+D
Sbjct: 378 FKNVLADIGDEQSITQNLSTFSSHIRRIILILKAVSNSSKSNSSKILNKFKNCSSLVLLD 437
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 415
E+G+GTDP+EG ALA S+L +L + L + TTHY ++ LK +D+RFENA+ EF+ +T
Sbjct: 438 EVGAGTDPTEGSALAISLLSHLANHALLTIATTHYGEIKALKYRDSRFENASVEFNDQTF 497
Query: 416 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 475
P+YR+LWG G SNA++IA+++G D I+Q A+ +V Q +++ L E+R
Sbjct: 498 SPSYRLLWGIPGRSNAISIAQNLGLDLNILQAARNIV-----GEQSKDVNDIILGLEEQR 552
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
K E +A A L + + Y E+ D+A L R LK + +++Q+ ++ AK +I V
Sbjct: 553 NKQELKANEAQELLKQAKNFYTEVSDKAVILKEREQELKHFQEKEIQKAISSAKEEIAQV 612
Query: 536 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 595
++ + D+ + ++ I I + P + SS+ P+ GE+V +
Sbjct: 613 IRHLQ------QGDKTSQKALQATKEILNISKEKLPQ-----VKKEYSSYCPKIGEKVKI 661
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
G A V++V D V+V++G M +++ +I + K A + Q++D
Sbjct: 662 TKFGQN-AQVLDVIADSQEVVVRFGLMTMKILFTDIESLDGLKVDKL--KAKKQSVQRQD 718
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 715
Q+ G+ + ++T N+LD+RG R+ EA L+ A+A + VL++IHG G
Sbjct: 719 IQAIDVGNQYD-------IRTDNNTLDIRGTRIFEAEISLEKAIAQATNIGVLWIIHGKG 771
Query: 716 TGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
TG +++ V E L+ HP+V ++ S G V +
Sbjct: 772 TGKLRQGVHEFLKIHPQVKDFKLASQNEGGSGVTLV 807
>gi|282900091|ref|ZP_06308048.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
gi|281194973|gb|EFA69913.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
Length = 815
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 258/758 (34%), Positives = 406/758 (53%), Gaps = 80/758 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ ELE++I CID + I DRAS+ L IR + ++ + L +
Sbjct: 117 LCDLVSQLRTYPELEQEIHHCIDERAQIA-DRASQKLSEIREDLRKLRSQITQKLHNIIQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + +IT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKSNALQELIITQRGDRYVLPVKAVQKDAVP-GIVHDSSTSGATLYIEPNSIVSMGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E E AIL +LT ++A+ + +++ L+ V ID+A A+A ++ W++G P L
Sbjct: 233 LRQTLKREQVEIEAILRILTTKVAEVKPDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRL 292
Query: 196 SSQSHVSFDSS--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
S SS I + ++HPLL+ +P+
Sbjct: 293 IHPSIPGGSSSEIITLRQLRHPLLV------WQQKHEQGHPV------------------ 328
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP+D+ + +VV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWF
Sbjct: 329 ----VPVDLLISPHIKVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFS 384
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----------SLVLIDEIGSGTDP 363
+LADIGD QSL Q+LSTFSGHI RI IL + E SL+L+DE+G+GTDP
Sbjct: 385 HVLADIGDEQSLAQSLSTFSGHIRRISRILNAIGEERQSSPYQTSHSLILLDEVGAGTDP 444
Query: 364 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
+EG ALA ++L+YL D L + TTH+ +L LK +D RFENA+ EF+ TL PTYR+LW
Sbjct: 445 AEGSALAIALLKYLGDHAQLTIATTHFGELKSLKYEDIRFENASVEFNETTLSPTYRLLW 504
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 483
G G SNAL IA +G ++++ A+ + E Q + L +RR E++A
Sbjct: 505 GIPGRSNALAIALRLGLKPEVVENAKSQLGETTDEVNQ-----VIAGLEAQRRSQETKAA 559
Query: 484 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
A L + LY+E+ A L+ R L+A + VQ+ + AK +I V++ +
Sbjct: 560 AAQELLKQTEKLYKEVSQRATALEEREKDLRASQEIAVQKAITQAKGEIAQVIRQLQQGK 619
Query: 544 RDAS-ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
A A + L+ E I + ++P V + F P+ GE+V + LG +
Sbjct: 620 PTAQDAQKATKLLTE-------IADKYQPVAPPKVKQ----GFIPEPGERVRIPKLG-QT 667
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNI------RPIPNSKRKNAANPAPRLRKQQEDR 656
A V+ + + V++G M++ V ++ +P+ SK K P + Q+++
Sbjct: 668 AQVISAADGNGELTVRFGMMKMTVNLEDVESLDGEKPLVPSKTK---VPLAVVSGQKQEL 724
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGT 716
+GS+ S+ ++TSKN++DLRG RV +A + LD ++ ++ +++IHG GT
Sbjct: 725 IAGSSTSTE-----NLEMRTSKNTVDLRGKRVGDAEYILDQVIS--QAAGPVWIIHGHGT 777
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
G +K+ V E L+ HPRV+ YE S ++ G T+A+IK
Sbjct: 778 GKLKQGVHEFLQQHPRVSHYEAASRVDGGTGVTIAHIK 815
>gi|37523206|ref|NP_926583.1| recombination and DNA strand exchange inhibitor protein
[Gloeobacter violaceus PCC 7421]
gi|35214209|dbj|BAC91578.1| glr3637 [Gloeobacter violaceus PCC 7421]
Length = 790
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/740 (35%), Positives = 397/740 (53%), Gaps = 80/740 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF 78
L+ ELE++I CID + DRASE L +R+ +R L + +++ Q+
Sbjct: 125 LVAEVRTFPELEQEIYRCID-DTGEVADRASEKLRDLRSGHRR----LRAEIQRTLLQLL 179
Query: 79 Q--AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 136
Q A + LIT+R R V +K SH+ +P GI + S+SG T F+EP ++ N
Sbjct: 180 QRRANCFQESLITQRGERFVVPVKVSHRDQVP-GIVHDSSASGQTLFVEPMAVIDTTNRL 238
Query: 137 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 196
V +E E IL+ L A +A+ E+ +L ++++DLA ARA +A W+ V P
Sbjct: 239 VEGMRAEQVEIERILAELAALVAERATELLHLHRVLVDLDLAAARARYASWLGAVRPRFG 298
Query: 197 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 256
+ + ++HPLL+ P+
Sbjct: 299 -------ERGCGLVQVRHPLLVWQE------RHEQGTPV--------------------- 324
Query: 257 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 316
VP+D+ V+ R VVITGPNTGGKT ++KTLGL LM++AGL++PA++ LPWFD +L
Sbjct: 325 -VPVDLPVDPAVRAVVITGPNTGGKTVTLKTLGLVVLMAQAGLFVPARDPAVLPWFDRVL 383
Query: 317 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 376
ADIGD QS+EQNLSTFSGHI RIV IL ++ ++LVL+DE+G+GTDP EG ALA ++L +
Sbjct: 384 ADIGDEQSIEQNLSTFSGHIRRIVRILAALTPDALVLLDEVGAGTDPQEGAALARALLVH 443
Query: 377 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 436
L +R GL + TTHY +L LK + FENA+ EF L TL PTYR+LWG G SNAL IA+
Sbjct: 444 LAERAGLVLATTHYGELKALKYTQSHFENASVEFDLATLSPTYRLLWGIPGRSNALTIAE 503
Query: 437 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 496
+G D +++ AQ + E + + +L E+ + E Q R+ L E+ L
Sbjct: 504 RLGLDAQVVAVAQASLSEGDVELDR-----VIGALQEQLQIQEEQVRSTTRLRGEVERLQ 558
Query: 497 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 556
++ + LD R A L+A++ QQV++ + A+ ++ V++ + D +
Sbjct: 559 SDLLRQQVLLDAREAALRARQDQQVREVVAEARAEVAQVIRTLQR------GDATAQQAQ 612
Query: 557 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
++ A+ A+ EA+ ++ + +E + PQ G++V + LG ++ V+ P + D V
Sbjct: 613 QASEALKAVGEAYLGEESAAPAE-----YRPQPGDKVEIVPLG-QMGEVLSPPDNGDQVR 666
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPA--PRLRKQQEDRQSGSAGSSNEEASYGPRV 674
VQ G +++ V P S+ + +PA P+ R Q E + S P V
Sbjct: 667 VQVGILKLTV--------PASQLRRPGSPATRPKPRPQAEVPRPPSPPKQE------PLV 712
Query: 675 QTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
+T ++DLRG RV EA L+ L L++IHG GTG +++ + EIL HPRVA
Sbjct: 713 RTEAQTIDLRGRRVAEAEALLEPELN--RQSGPLWIIHGHGTGKLRDGIHEILERHPRVA 770
Query: 735 KYE--QESPMNYGCTVAYIK 752
++E + G TV ++K
Sbjct: 771 RFEFADRTEGGNGVTVVFLK 790
>gi|161353751|ref|NP_484093.2| recombination and DNA strand exchange inhibitor protein [Nostoc sp.
PCC 7120]
Length = 798
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 252/746 (33%), Positives = 398/746 (53%), Gaps = 75/746 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ ELE++I CID + + DRAS L IR E ++ + L+ +
Sbjct: 117 LTELVAELRTYPELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKSNAVQEQLITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E AEE AI LT ++A + +++ L+ V +D+A ARA ++ W+ P
Sbjct: 233 LRQTIRKEQAEEEAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ I + + HPLL+ A
Sbjct: 293 IDRQEQEI---ITLRQLHHPLLVWQQQHEQGHAV-------------------------- 323
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
+P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +
Sbjct: 324 --IPVDLLISPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQV 381
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDIL--------ELVSRESLVLIDEIGSGTDPSEGV 367
LADIGD QSL+Q+LSTFSGHI RI IL +L + SLVL+DE+G+GTDP+EG
Sbjct: 382 LADIGDEQSLQQSLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGS 441
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA ++LQYL D L V TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G
Sbjct: 442 ALAIALLQYLADHAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPG 501
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA +G +++++A+ V E + + L +RR+ E++A A
Sbjct: 502 RSNALAIALRLGLKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQK 556
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ + LY+E+ ++A L R LKA + VQQ + AK +I V++ +L+ +
Sbjct: 557 ILQQAERLYKEVSNKAAALQEREQSLKASQEIAVQQAITQAKGEIAKVIR----RLQQGT 612
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
A ++ +++ + + I + ++ + F P+ G+++ + G + A V+
Sbjct: 613 ATAQDA--QQATNNLHQIAQKYQ----PAPPPKAKPGFVPKVGDRIRISQFG-QTADVLT 665
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
P +D + V++G M++ VK +I + K P P + K + + +
Sbjct: 666 APDEDGELTVRFGIMKMTVKLEDIESLDGQK------PEP-ITKAKPAPVTPPPPAQPVL 718
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
A ++TSKN++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V L
Sbjct: 719 A-----IRTSKNTVDLRGKRVADAEYILDKAIS--EATGPIWIIHGHGTGKLRQGVHTFL 771
Query: 728 RNHPRVAKYE--QESPMNYGCTVAYI 751
HPRV+++E ++S G T+A+I
Sbjct: 772 EQHPRVSRHEPAEQSDGGSGVTIAHI 797
>gi|282896735|ref|ZP_06304743.1| MutS 2 protein [Raphidiopsis brookii D9]
gi|281198453|gb|EFA73341.1| MutS 2 protein [Raphidiopsis brookii D9]
Length = 814
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 255/760 (33%), Positives = 404/760 (53%), Gaps = 85/760 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ ELE+++ CID + I DRAS+ L IR + ++ + L +
Sbjct: 117 LCDLVSQLRTYPELEQEVHHCIDERAQIA-DRASQKLSEIREDLRKLRSQITQKLHNIIQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + +IT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKSNALQELIITQRGDRYVLPVKAPQKDAVP-GIVHDSSTSGATLYIEPNSIVSMGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E E AIL +LT ++A+ + +++ L+ V ID+A A+A ++ W++G P L
Sbjct: 233 LRQTLKREQVEIEAILRILTTKVAEVKPDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRL 292
Query: 196 SSQSHVSFDSS----INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
H S S I + ++HPLL+ +P+
Sbjct: 293 I---HPSIPGSSSQIITLRQLRHPLLVWQQ------KHEQGHPV---------------- 327
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+D+ + +VV +TGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PW
Sbjct: 328 ------VPVDLLISPHIKVVTMTGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPW 381
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----------SLVLIDEIGSGT 361
F +LADIGD QSL Q+LSTFSGHI RI IL + E SL+L+DE+G+GT
Sbjct: 382 FSQVLADIGDEQSLAQSLSTFSGHIRRISRILNAIGEEIQSSPYQTSHSLILLDEVGAGT 441
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA ++L+YL D L + TTH+ +L LK +D RFENA+ EF+ TL PTYR+
Sbjct: 442 DPAEGSALAIALLKYLGDHAQLTIATTHFGELKSLKYEDIRFENASVEFNETTLSPTYRL 501
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA +G ++++ A+ + E Q + L +RR E++
Sbjct: 502 LWGIPGRSNALAIALRLGLKPEVVENAKSQLGGTTDEVNQ-----VIAGLEAQRRSQETK 556
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A A L + LY+E+ A L+ R L+A + VQ+ + AK +I V++ +
Sbjct: 557 AAAAQELLKQTEKLYKEVSQRATALEEREKDLRASQEIAVQKAITQAKGEIAQVIRQLQQ 616
Query: 542 QLRDAS-ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 600
A A + L+ E I + ++P V + F P+ GE+V + LG
Sbjct: 617 GKPTAQDAQKATKLLTE-------IADKYQPAAPPKVKQ----GFIPEPGERVRIPKLG- 664
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNI------RPIPNSKRKNAANPAPRLRKQQE 654
+ A V+ + + V++G M++ V ++ +P+ SK K P + Q++
Sbjct: 665 QTAQVISAADGNGELTVRFGMMKMTVNLEDVESLDGEKPLVPSKTK---APLAGVSGQKQ 721
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGM 714
+ + S S+ ++TSKN++DLRG RV +A + LD ++ ++ +++IHG
Sbjct: 722 ELIAASLPSTENL-----EMRTSKNTVDLRGKRVADAEYILDQVIS--QAAGPVWIIHGY 774
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
GTG +K+ V E L+ HPRV+ YE S ++ G T+A+IK
Sbjct: 775 GTGKLKQGVHEFLQQHPRVSHYEAASRVDGGTGVTIAHIK 814
>gi|75908863|ref|YP_323159.1| recombination and DNA strand exchange inhibitor protein [Anabaena
variabilis ATCC 29413]
gi|75702588|gb|ABA22264.1| MutS 2 protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/746 (33%), Positives = 396/746 (53%), Gaps = 75/746 (10%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ ELE++I CID + + DRAS L IR E ++ + L+ +
Sbjct: 117 LTELVAELRTYPELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKSNAVQEQLITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+ E AEE AI LT ++A + +++ L+ V +D+A ARA ++ W+ P
Sbjct: 233 LRQTIRKEQAEEEAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ I + + HPLL+ A
Sbjct: 293 IDRQEQEI---ITLRQLHHPLLVWQQQHEQGHAV-------------------------- 323
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
+P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +
Sbjct: 324 --IPVDLLISPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDQV 381
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------ESLVLIDEIGSGTDPSEGV 367
LADIGD QSL+Q+LSTFSGHI RI IL + +SLVL+DE+G+GTDP+EG
Sbjct: 382 LADIGDEQSLQQSLSTFSGHIRRISRILNALGTGDKEEYRPQSLVLLDEVGAGTDPAEGS 441
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA ++LQYL D L V TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G
Sbjct: 442 ALAIALLQYLADHAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPG 501
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA +G +++++A+ V E + + L +RR+ E++A A
Sbjct: 502 RSNALAIALRLGLKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQK 556
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ + LY+E+ ++A L R L+A + VQQ + AK +I V++ +L+ +
Sbjct: 557 ILQQAERLYKEVSNKAAALQEREQSLRASQEVAVQQAITQAKGEIAKVIR----RLQQGT 612
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
A ++ +++ + + I + ++ + F P+ G+++ + G + A V+
Sbjct: 613 ATAQDA--QQATNNLNQIAQKYQ----PAPPPKAKPGFVPKIGDRIRISQFG-QTADVLT 665
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
P +D + V++G M++ VK +I + K P P ++ + + +
Sbjct: 666 APDEDGELTVRFGIMKMTVKLEDIESLDGQK------PEPIVKAKP------APVTPPPP 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
A ++TSKN++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V L
Sbjct: 714 AQPVLAIRTSKNTVDLRGKRVADAEYILDKAIS--EATGPIWIIHGHGTGKLRQGVHAFL 771
Query: 728 RNHPRVAKYE--QESPMNYGCTVAYI 751
HPRV+ +E ++S G TVA+I
Sbjct: 772 EQHPRVSHHEPAEQSDGGSGVTVAHI 797
>gi|17135027|dbj|BAB77573.1| DNA mismatch repair protein [Nostoc sp. PCC 7120]
Length = 678
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/734 (33%), Positives = 394/734 (53%), Gaps = 75/734 (10%)
Query: 28 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 87
ELE++I CID + + DRAS L IR E ++ + L+ + ++ + + L
Sbjct: 9 ELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQL 65
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
IT+R R + +KA K +P GI + S+SGAT ++EP V N + E AEE
Sbjct: 66 ITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEE 124
Query: 148 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 207
AI LT ++A + +++ L+ V +D+A ARA ++ W+ P + I
Sbjct: 125 EAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---I 181
Query: 208 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 267
+ + HPLL+ A +P+D+ +
Sbjct: 182 TLRQLHHPLLVWQQQHEQGHAV----------------------------IPVDLLISPH 213
Query: 268 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 327
RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q
Sbjct: 214 IRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQ 273
Query: 328 NLSTFSGHISRIVDIL--------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
+LSTFSGHI RI IL +L + SLVL+DE+G+GTDP+EG ALA ++LQYL D
Sbjct: 274 SLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLAD 333
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
L V TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +G
Sbjct: 334 HAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLG 393
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
+++++A+ V E + + L +RR+ E++A A + + LY+E+
Sbjct: 394 LKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEV 448
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
++A L R LKA + VQQ + AK +I V++ +L+ +A ++ +++
Sbjct: 449 SNKAAALQEREQSLKASQEIAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQAT 502
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ + I + ++ + F P+ G+++ + G + A V+ P +D + V++
Sbjct: 503 NNLHQIAQKYQ----PAPPPKAKPGFVPKVGDRIRISQFG-QTADVLTAPDEDGELTVRF 557
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G M++ VK +I + K P P + K + + + A ++TSKN
Sbjct: 558 GIMKMTVKLEDIESLDGQK------PEP-ITKAKPAPVTPPPPAQPVLA-----IRTSKN 605
Query: 680 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 737
++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V L HPRV+++E
Sbjct: 606 TVDLRGKRVADAEYILDKAIS--EATGPIWIIHGHGTGKLRQGVHTFLEQHPRVSRHEPA 663
Query: 738 QESPMNYGCTVAYI 751
++S G T+A+I
Sbjct: 664 EQSDGGSGVTIAHI 677
>gi|427721207|ref|YP_007069201.1| MutS2 protein [Calothrix sp. PCC 7507]
gi|427353643|gb|AFY36367.1| MutS2 protein [Calothrix sp. PCC 7507]
Length = 828
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 261/778 (33%), Positives = 397/778 (51%), Gaps = 108/778 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L+ ELE++I CID + + DRAS+ L IR + +R L S + +
Sbjct: 117 LTALVAELRTYPELEQEIHRCIDERGQVT-DRASQKLGEIRTDLRR----LRSQITQKLQ 171
Query: 76 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I QA G + + LIT+R R + +KA K +P GI + S+SGAT ++EP V
Sbjct: 172 NILQAKSGAVQEQLITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPMG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N ++ E AEE AI LT ++A + +++ L+ V +DLA ARA ++ W+ P
Sbjct: 231 NQLRQVIRKEQAEEEAIRRALTEQVAAVKPDLERLLAIVTTLDLATARARYSFWLGANPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
H I + ++HPLL+ P+
Sbjct: 291 RFI---HRQDQEIITLRHLRHPLLVWQQ------QHEQGQPV------------------ 323
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD
Sbjct: 324 ----VPVDLLISPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFD 379
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELV---------------SRE--------- 349
+LADIGD QSL+Q+LSTFSGHI RI IL + SRE
Sbjct: 380 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALGHGEEAALRLRSGQGSREQGAGEQNLE 439
Query: 350 -------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+LVL+DE+G+GTDP EG ALA ++LQYL D LA+ TTH+ +L L
Sbjct: 440 LRTPDSVLSTQHSALVLLDEVGAGTDPVEGSALAIALLQYLADHAQLAIATTHFGELKAL 499
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G ++I+ A+ V
Sbjct: 500 KYEDERFENASVEFDETTLSPTYRLLWGIPGRSNALTIALRLGLKPEVIEHAKTQVGEAT 559
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
E Q + L +RR+ E++A A ++ + LY+E+ +A+ L R L+A
Sbjct: 560 DEVNQ-----VIAGLEAQRRRQETKATEAQNVLQQAERLYKEVSAKAEALQEREKALRAS 614
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
+ VQQ + AK +I V++ + A +++ +A+ I + ++ +
Sbjct: 615 QEVAVQQAIAQAKTEIAQVIRRLQQGTPTAQD------AQQATNALNQIAQQYQ----PA 664
Query: 577 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
+ F P+ G+++ + G + A V+ P +D V++G M++ V +I +
Sbjct: 665 PPPKPKAGFMPKVGDRIRISKFG-QTAEVLTAPDEDGEFSVRFGIMKMTVTLEDIESLDG 723
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
K A P +Q + + A ++TSKN++DLRG RV +A LD
Sbjct: 724 QK----AEPVV--------KQKPAPAPVPQPAQPALAIRTSKNTIDLRGKRVADAEFMLD 771
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
A++ E+ +++IHG GTG +++ V L+ HPRV YE + ++ G TVAY++
Sbjct: 772 KAIS--EASGPVWIIHGHGTGKLRQGVHTYLQQHPRVNNYEAAAQVDGGSGVTVAYVQ 827
>gi|119512341|ref|ZP_01631426.1| MutS 2 protein [Nodularia spumigena CCY9414]
gi|119462992|gb|EAW43944.1| MutS 2 protein [Nodularia spumigena CCY9414]
Length = 770
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 259/768 (33%), Positives = 396/768 (51%), Gaps = 98/768 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ + ELE++I CID + + DRAS L IR E + + S + +
Sbjct: 70 LADLVADLRTYPELEQEIHRCIDERGQVT-DRASLKLGEIRTE----LRKIRSQITQKLH 124
Query: 76 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I QA G + + +IT+R R + +KA K +P GI + S+SGAT ++EP V F
Sbjct: 125 NILQAKSGAVQEQIITQRGDRYVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPFG 183
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + E EE AI LT ++A+ + +++ L+ V +DLA ARA ++ W+ P
Sbjct: 184 NQLRQTIRREQTEEEAIRRSLTQKVAEVKPDLERLLAIVTTLDLATARARYSFWLGANPP 243
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + I + ++HPLL+ A
Sbjct: 244 RFINRED---NEMITLRQLRHPLLVWQQQHEHGQAV------------------------ 276
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP+D+ + RVV ITGPNTGGKT S+KTL LA+LM+K GL++PA+ +PWF+
Sbjct: 277 ----VPVDLLISPHLRVVTITGPNTGGKTVSLKTLALAALMAKVGLFVPAREPVEIPWFE 332
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE------------------------ 349
+LADIGD QSL+Q+LSTFSGHI RI IL + +E
Sbjct: 333 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALDQEEESENISLSPDSPHSPHTPHTPHT 392
Query: 350 ---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 406
SLVL+DE+G+GTDP EG ALA ++LQYL + L + TTH+ +L LK +D RFENA
Sbjct: 393 PHSSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYEDERFENA 452
Query: 407 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 466
+ EF TL PTYR+LWG G SNAL IA+ +G ++I +A+ V E Q
Sbjct: 453 SVEFDESTLSPTYRLLWGIPGRSNALTIARRLGLKPEVITQAKTQVGGATDEVNQ----- 507
Query: 467 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 526
+ L +RR+ E++A A SL + LY+E+ ++ L R L+A + VQQ +
Sbjct: 508 VIAGLEAQRRRQETKAAEAQSLLQQAERLYKEVSAKSDALQEREKALRADQEVAVQQAIA 567
Query: 527 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 586
AK +I V++ + A +++ A+ I + ++P V+ F
Sbjct: 568 QAKGEIAQVIRRLQKGTPKAQD------AQQATDALNQISQKYQP----KVAPKPKVGFM 617
Query: 587 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 646
P+ G++V + G + A V+ P D V++G M++ VK +I + K + P
Sbjct: 618 PKVGDRVRLSQFG-QTADVLTSPDADGEFSVRFGIMKMTVKLEDIESLDGQKAEPIVKPK 676
Query: 647 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRS 706
P A + E S P ++TS+N++DLRG RV ++ LD A++ E+
Sbjct: 677 P-----------APAPVTPPEQS-APAIRTSRNTVDLRGKRVADSEIVLDKAIS--EATG 722
Query: 707 VLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L++IHG GTG +++ V L HPRV+ +E +++ G T+A+IK
Sbjct: 723 PLWIIHGHGTGKLRQGVHAFLHQHPRVSHHEPAEQADGGSGVTIAHIK 770
>gi|427733731|ref|YP_007053275.1| MutS2 family protein [Rivularia sp. PCC 7116]
gi|427368772|gb|AFY52728.1| MutS2 family protein [Rivularia sp. PCC 7116]
Length = 817
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 255/767 (33%), Positives = 402/767 (52%), Gaps = 96/767 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ + ELE++I CID + + DRASE L IR +++ + L+ +
Sbjct: 117 LNELVADLRTYPELEKEIHRCIDERGQVT-DRASEKLGDIRNSLRQSRSQITRKLQNIIQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+A + + +IT+R R + +KA K +P GI + S+SGAT ++EP V N
Sbjct: 176 --VKANALQETIITQRSDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPMGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E EE AI L+ ++A+ + +++ L+ +DLA A+A ++ W+ P
Sbjct: 233 LRQLLRREQVEEEAIRRKLSEQVAEVKLDLEKLLAVATTLDLATAKARYSFWLKANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
S + +I + ++HPLL+ + + E+
Sbjct: 293 IQPS----EENITLRELRHPLLVWQ---------------QQHEQGHEV----------- 322
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
+P+++ + RVV ITGPNTGGKT ++KTLG A+LM+K GL++PA+ LPWFD +
Sbjct: 323 --IPVNLVIHPYIRVVTITGPNTGGKTVTLKTLGFATLMAKIGLFVPAREPVELPWFDRV 380
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSR-------------------------ES 350
LADIGD QSLEQ+LSTFSGHI RI IL+ VS S
Sbjct: 381 LADIGDEQSLEQSLSTFSGHIRRISRILDAVSHVKVEEAQTAEKAEQEENTSLPSPTPSS 440
Query: 351 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 410
LVL+DE+G+GTDP EG ALA ++L+YL D L + TTH+ +L LK +D RFENA+ EF
Sbjct: 441 LVLLDEVGAGTDPVEGSALAIALLRYLADNSMLTIATTHFGELKALKYQDERFENASVEF 500
Query: 411 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 470
TL PTYR+LWG G SNAL IA +G +++++A+ + E Q +
Sbjct: 501 DEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVVEKAKDEMGGATDEVNQ-----VIAG 555
Query: 471 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 530
L +RR+ E +A A L + Y+E+ +A DL+ R L+A + VQQ + AK
Sbjct: 556 LEAQRRRQEEKATQAQDLLQQAERFYKEVSAKAADLEEREKSLRASQEIAVQQAIASAKG 615
Query: 531 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF--SVSETNTSSFTPQ 588
+I V++ + N ++++ A +I ++ D F + F P+
Sbjct: 616 EIAAVIKRLQQG---------NPTAQDAKKATDSI---NKLADRFIPKAEPKPKAGFMPK 663
Query: 589 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
GE++ + LG + A V+ P +D V++G M++ VK ++ + K A P+ +
Sbjct: 664 VGERIRIPKLG-QTAEVLTAPDEDGEFNVRFGIMKMTVKLKDVESLSGEK----AQPSAK 718
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVL 708
+ + + N P ++TSKN++DLRG RV +A LD A++ E++ +
Sbjct: 719 AKPAAKIAPAPPPPVENT-----PLIRTSKNTVDLRGRRVADAELVLDKAIS--EAQRAI 771
Query: 709 FVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 752
++IHG GTG +++ V L+ +PR++ YE +P N G T+AYIK
Sbjct: 772 WIIHGHGTGKLRQGVHAYLKQNPRISNYEA-APQNDGGTGVTIAYIK 817
>gi|434407615|ref|YP_007150500.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
gi|428261870|gb|AFZ27820.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
Length = 814
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 254/772 (32%), Positives = 401/772 (51%), Gaps = 106/772 (13%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L EL+ + ELE++I CID + + DRAS+ L IR + +R L S + +
Sbjct: 115 PILNELVADLRTYPELEQEIHRCIDERAQVT-DRASQKLGEIRLDLRR----LRSQITQK 169
Query: 74 AAQIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
I QA G + + LIT+R R + +KA K +P GI + S+SGAT ++EP V
Sbjct: 170 LQNIIQAKSGAVQEQLITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPHSVVP 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N ++ E EE AI LT ++A + +++ L+ +DLA A++ ++ W+
Sbjct: 229 IGNQLRQVIRKEQTEEEAIRRALTEQVAAVKPDLERLLAIATSLDLATAKSRYSFWIGAN 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P + IN+ ++HPLL+ P+
Sbjct: 289 PPRFIQRQDQEI---INLRHLRHPLLVWQQ------QHEQGQPV---------------- 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+D+ + + RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PW
Sbjct: 324 ------VPVDLFISPQIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPW 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILE------------------------LVS 347
FD +LADIGD QSL+Q+LSTFSGHI RI ILE L
Sbjct: 378 FDKVLADIGDEQSLQQSLSTFSGHIRRISRILEALGDNSSVTGNEEDSEQLPITHYPLPI 437
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
+SLVL+DE+G+GTDP EG ALA ++LQYL + L + TTH+ +L LK ++ RFENA+
Sbjct: 438 TKSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYENERFENAS 497
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 467
EF TL PTYR+LWG G SNAL IA +G ++I++A+ V E + +
Sbjct: 498 VEFDESTLSPTYRLLWGIPGRSNALTIALRLGLKPEVIEQAKTQVGEATDE-----VNLV 552
Query: 468 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 527
L +RR+ E++A A L + LY+E+ +A DL R L+ + VQQ +
Sbjct: 553 IAGLEAQRRRQETKAAEAQDLLRQAEILYKEVSAKAADLQEREKALRVSQEVAVQQAIAS 612
Query: 528 AKVQIDTVVQDFEN-----QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 582
AK +I V++ + Q + + +N + ++S+ A P +
Sbjct: 613 AKSEIAQVIRRLQQGTPTAQEAQQATNALNQIAQKSQPA---------PPPKAKI----- 658
Query: 583 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 642
+F P+ G+++ + LG + A V+ P +D + V++G M++ V+ ++ + K
Sbjct: 659 -AFMPKVGDRIRIPKLG-QTAEVLTAPDEDGELTVRFGIMKMMVQLADVESLDGQK---- 712
Query: 643 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACW 702
A P + + + + ++TS+N++DLRG RV +A + LD A++
Sbjct: 713 AEPVVKPKPAPAAVIAPPPPAPA--------IRTSQNTIDLRGKRVADAEYMLDKAIS-- 762
Query: 703 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
E+ +++IHG GTG +++ V L+ HPRV YE + + G T+AY++
Sbjct: 763 EAAGPVWIIHGYGTGKLRQGVHAFLQQHPRVNHYEAAERTDGGSGVTIAYVQ 814
>gi|443312975|ref|ZP_21042589.1| MutS2 family protein [Synechocystis sp. PCC 7509]
gi|442777125|gb|ELR87404.1| MutS2 family protein [Synechocystis sp. PCC 7509]
Length = 792
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 255/741 (34%), Positives = 399/741 (53%), Gaps = 71/741 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L +L+ ELE++I CID + + DR+S L +R + K+ ++ L+ +
Sbjct: 117 LTQLVSELRTYPELEQEIHRCIDERGQVT-DRSSPILGDLRTQIKQLRTQINRSLQNILQ 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ QA + + +IT+R R + +KA K +P GI + S+SGAT ++EP G V N
Sbjct: 176 R--QANAVQEQIITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPSGVVPLGNQ 232
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E EE AI LT +A+ +++ L+ IDLA ARA ++ W+ P
Sbjct: 233 LRQLVRKEQVEEEAIRRTLTKLVAEVSEDLERLLAIATTIDLATARARYSFWLKANPPRF 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+++ IN+ ++HPLL+ + N
Sbjct: 293 INRNDGEM---INLRQLRHPLLVWQQ-----QHEQDRNV--------------------- 323
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VP+D+ ++ RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWF+ +
Sbjct: 324 --VPVDLFIQPNIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQV 381
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELV--SRESLVLIDEIGSGTDPSEGVALATSI 373
L DIGD QSLEQ+LSTFSGHI RI IL + S SLVL+DE+G+GTDP EG ALA S+
Sbjct: 382 LTDIGDEQSLEQSLSTFSGHIRRISRILTAIDKSGSSLVLLDEVGAGTDPVEGSALAISL 441
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L YL + L++ TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL
Sbjct: 442 LHYLANNAQLSIATTHFGELKALKYQDDRFENASVEFDEISLSPTYRLLWGIPGRSNALT 501
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
IA+ +G ++I+ A+K + + Q + L +R++ E++A A L +
Sbjct: 502 IAERLGLKLEVIEEAKKHLGGANDDVNQ-----VIAGLEAQRKRQETKATEAQKLLEQAE 556
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 553
Y+E+ +A L R L+A + VQ+ ++ AK +I V++ +L+ + +++
Sbjct: 557 RFYQEVSAKAAALQARERDLRASQDVVVQKAISEAKGEIAQVIR----RLQKGTVTAMDA 612
Query: 554 LIKESE-SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+E + IAA + + F PQ G+++ + LG + A V+ +P D+
Sbjct: 613 QQATNELNQIAA--------NYVAPPPKPKPGFKPQIGDRLRIPKLG-QTAEVLSIPSDE 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
++V++G M++ V +I + K A P + E P
Sbjct: 664 GDLIVRFGIMKMTVNLEDIESLDGEKPVVAKKKKPEV-----------IADKPIETIPTP 712
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++TSKN++DLRG RV +A LD A++ + L++IHG GTG +++ V E LR HPR
Sbjct: 713 VIRTSKNTVDLRGSRVADAERTLDDAIST--ANGQLWIIHGHGTGKLRQGVREFLRQHPR 770
Query: 733 VAKYE--QESPMNYGCTVAYI 751
+++YE Q++ G TVAYI
Sbjct: 771 ISRYEDAQKADGGTGVTVAYI 791
>gi|220908146|ref|YP_002483457.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7425]
gi|219864757|gb|ACL45096.1| MutS2 family protein [Cyanothece sp. PCC 7425]
Length = 818
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 254/764 (33%), Positives = 403/764 (52%), Gaps = 88/764 (11%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
PLL +L+ ELE++I CID + DRAS L IR +++ + + +L+ +
Sbjct: 117 PLLSQLVTPLRTYPELEQEIHRCID-DAGEVADRASAKLTDIRDRQRQVRQQIQRILQDI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ +A + + +IT+R R + +KA K +P GI + SSSGAT ++EP+ + N
Sbjct: 176 LQR--KANALQEAVITQRSDRFVIPVKAPQKDAIP-GIVHDSSSSGATLYIEPQSTINLN 232
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L+ E E AIL L+ ++ + +++ L+ V +DLA AR+ ++ W++G P
Sbjct: 233 NQLRQLARQEQTEVEAILRQLSQQVGAVQADLEQLLQIVTHLDLAAARSRYSTWLEGNRP 292
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
V + I + ++HPLL+ A P+
Sbjct: 293 HFIK---VHSNDKITLRQLRHPLLVWQQRHEQGA------PV------------------ 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VPID+ + +TRVVV+TGPNTGGKTAS+KTLGL +LM+KAGL++PA+ LPWF+
Sbjct: 326 ----VPIDLSIHPQTRVVVMTGPNTGGKTASLKTLGLTALMAKAGLFIPAREPVELPWFE 381
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVS-----------------------RES 350
ILADIGD QSL+Q+LSTFSGHI I IL+ + ++
Sbjct: 382 QILADIGDEQSLQQSLSTFSGHIRCISQILDALDDPNADPSASLMENGHDHISSDSLAQA 441
Query: 351 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 410
LVL+DE+G+GTDP+EG ALA ++L YL D L V TTH+ +L LK +D RFENA+ EF
Sbjct: 442 LVLLDEVGAGTDPTEGTALAIALLHYLADHTYLTVATTHFGELKALKYQDQRFENASVEF 501
Query: 411 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 470
+L PTYR+LWG G SNAL IA+ +G + +++ A+ + R+ +++
Sbjct: 502 DEASLAPTYRLLWGIPGRSNALAIARRLGLNERVLTAAETELG----GRKTEDVNQVIAG 557
Query: 471 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 530
L +R++ E++++ AA L A+ L+RE+E +A L R L+ ++ Q VQQ + AK
Sbjct: 558 LEAQRKQQETRSQAAAELLAQTERLHRELEQKAAQLQAREQTLRQQQEQTVQQAIATAKA 617
Query: 531 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
++ +++ + A + + + + + + P S F PQ G
Sbjct: 618 EVARIIRQLQQGQTAQDAQQASQALDQ-------VATEYLPSRKQPTSPPPKPGFRPQLG 670
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
++V + SLG + A V+ P D + V++G M++ + I + K
Sbjct: 671 DRVRIPSLG-QTAEVITAPNVDGELTVRFGLMKMNLNLTEIESLTGEK------------ 717
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFV 710
E + P ++TS+N++DLRG RV +A LD A+ S L++
Sbjct: 718 --AEPLPKAKPAAPPPPPPPTPTLRTSQNTIDLRGSRVADAEMTLDQAIGN-TSSGALWI 774
Query: 711 IHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
IHG GTG +++ V E L+N+ RV ++E P + G T+AY+K
Sbjct: 775 IHGYGTGKLRQGVHEFLKNNSRVDRFEFAEPADGGQGVTIAYLK 818
>gi|443327052|ref|ZP_21055687.1| MutS2 family protein [Xenococcus sp. PCC 7305]
gi|442793341|gb|ELS02793.1| MutS2 family protein [Xenococcus sp. PCC 7305]
Length = 804
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 254/754 (33%), Positives = 406/754 (53%), Gaps = 81/754 (10%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L EL+ E+E++I CID + I DRA+ + IRA+ K +L +++
Sbjct: 116 PVLNELIFPVRTYPEIEQQIHHCIDDRGEIT-DRANPRIAGIRAKVK----SLRRQIRQS 170
Query: 74 AAQIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+I Q+ G + + +IT+R R + +K K +P GI +VSS+G+T ++EP V
Sbjct: 171 LQRIIQSNLGSVQEAVITQRSDRFVIPVKPGQKETIP-GIVHDVSSTGSTLYIEPSSVVN 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + + EE +L LT +I + + +++ L+ +DLA ARA ++ W++
Sbjct: 230 AGNALRQAEKQQKREEEIVLRELTEKITEVQEDLEELLAIATVLDLATARARYSLWLEAN 289
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P +S ++ + ++HPLL+ A
Sbjct: 290 PPRFIERSE-----TVTLRRLQHPLLVWQQKHESGTAV---------------------- 322
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VPID+K+E +TRVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK +PW
Sbjct: 323 ------VPIDVKIEPQTRVVAITGPNTGGKTVTLKTIGLAALMAKAGIFVPAKVPVEIPW 376
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE---------SLVLIDEIGSGTD 362
F+ +LADIGD QSL+Q+LSTFSGHI RI I+E + + SLVL+DE+G+GTD
Sbjct: 377 FNTVLADIGDEQSLQQSLSTFSGHIRRISRIIEALKPQEELKANCSNSLVLLDEVGAGTD 436
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P+EG ALA ++L+YL + L V TTHY +L LK +D RFENA+ EF +L+PTYR+L
Sbjct: 437 PAEGSALAIALLKYLAEHSLLTVATTHYGELKALKYQDERFENASVEFDDSSLQPTYRLL 496
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
WG G SNAL IA+ +G D +I+ AQ LV + + +++ +L +RR+ ES+A
Sbjct: 497 WGIPGRSNALTIAQRLGLDSEIVTDAQNLVGIGKTD----DVNQVIAALENQRREQESKA 552
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE-- 540
A L ++ Y E+ A+ L R LK + + VQ+ + AK +I V++ +
Sbjct: 553 EEAGKLLSQTELFYEEVSQRAESLQAREQELKLSQEKAVQKAIAEAKAEIAQVIRRLQQG 612
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 600
NQ + +L K + A +A +P + PQ GE+V + L +
Sbjct: 613 NQTAQKAQQATEALNKIASKQAIAKPKAPKP------------GYHPQVGEKVRIPRL-N 659
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ V+ + ++ + V++G M++ V I + K PA + + + + +
Sbjct: 660 QTGEVLSIE-ENSQLTVRFGLMKMTVGVTEIESLDGKK----VEPAAKEKTTTKKKTPTA 714
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVK 720
+ + V+TS+N+LD+RG RV + ++ A+A +L++IHG GTG ++
Sbjct: 715 TTTKQTPVT----VRTSQNTLDIRGSRVANSEVDIESAIAQATESGILWIIHGKGTGRLR 770
Query: 721 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ V E L+ HP+VAKYE + G TV Y+K
Sbjct: 771 QGVHEFLQRHPQVAKYELAPQKEGGSGVTVVYLK 804
>gi|428309185|ref|YP_007120162.1| MutS2 family protein [Microcoleus sp. PCC 7113]
gi|428250797|gb|AFZ16756.1| MutS2 family protein [Microcoleus sp. PCC 7113]
Length = 839
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 251/787 (31%), Positives = 402/787 (51%), Gaps = 111/787 (14%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L EL+ ELE++I ID + + DRAS L IR + K + + +L+ +
Sbjct: 115 PILNELVAEVRTYPELEQEIHHSIDERG-DVADRASPKLAGIRLKLKSLRDRIYQVLQGI 173
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ Q G + + +IT+R R + +KA K +P GI + SS+GAT ++EP V +
Sbjct: 174 LQR--QGGAVQQQVITQRGDRFVIPVKAPQKDAIP-GIVHDTSSTGATVYVEPNAIVGLS 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N E EE AIL LT ++A + +++ L+ +DLA A+A ++ W+ P
Sbjct: 231 NQLRIHRRQEQTEEEAILRALTQQVAAVKPDLEKLLAVATALDLATAKARYSLWLQANPP 290
Query: 194 -ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
+ Q+ +I + ++HPLL+ P+
Sbjct: 291 RFIDRQA----GETITLRELRHPLLVWQQ------QHEQGTPV----------------- 323
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VPI+++++ RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ LPWF
Sbjct: 324 -----VPINVQIQPSIRVVAITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWF 378
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES---------------------- 350
D +LADIGD QS+EQ+LSTFSGHI RI ILE + ES
Sbjct: 379 DQVLADIGDEQSIEQSLSTFSGHIRRISRILEAIRGESEALQVDTLLAPRQNSDEDAAQV 438
Query: 351 -----------------------LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 387
LVL+DE+G+GTDP+EG ALA ++LQ+L + L V T
Sbjct: 439 ESWEDDAQTSNLLQPSTPAPSPSLVLLDEVGAGTDPAEGSALAIALLQHLANTAQLTVAT 498
Query: 388 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 447
THY +L LK +D RFENA+ EF TL+PTYR+LWG G SNAL +A+ +G + ++ +
Sbjct: 499 THYGELKALKYQDERFENASVEFDDSTLQPTYRLLWGIPGRSNALAVARRLGLNPNVVDQ 558
Query: 448 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
AQ L+ + Q + L +RR+ E++A+ A L + L++E+ D A+ L+
Sbjct: 559 AQSLIGGASEDINQ-----VIAGLEAQRRRQETKAKEATQLLQQAERLHQEVSDRARLLN 613
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
R LK + + VQ+ L AK +I V++ + + A + ++ A A+ E
Sbjct: 614 ERERTLKLSQERAVQEALVQAKEEIAQVIRTLQQGPKSA---------QNAQKATDALQE 664
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + SF P+ G+++ + L ++ A V+ P +D + V++G M++ V
Sbjct: 665 IAQRRLPAKLPAKQKPSFRPKVGDRIRIPRL-NQTAEVLSAPDEDGELTVRFGLMKMTVL 723
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+++ + K A P ++ A + + P V+T KN++D+RG
Sbjct: 724 LSDVESLDGQK---AEMPV--------KQKPAPAPTPAVASPPSPVVRTDKNTIDIRGKH 772
Query: 688 VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYG 745
V +A +L+ ++ L++IHG GTG +++ V L HP V ++E Q++ G
Sbjct: 773 VADAEFELEQGISEATQLGTLWIIHGKGTGKLRQGVHAFLERHPLVERFELAQQAEGGTG 832
Query: 746 CTVAYIK 752
T+AY+K
Sbjct: 833 VTLAYLK 839
>gi|254412960|ref|ZP_05026732.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180124|gb|EDX75116.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 820
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 262/769 (34%), Positives = 397/769 (51%), Gaps = 94/769 (12%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L +L+ + ELE++I CID + + DRAS L IR K + + L+ +
Sbjct: 115 PVLNQLVADIRTYPELEQEIHRCIDERGDVT-DRASPKLAEIRQHSKSLRDRIYQTLQNI 173
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ Q G + +PLIT+R R + +KA K + GI + SS+GAT ++EP V
Sbjct: 174 VQR--QGGALQQPLITQRGDRFVLPVKAPQKDSV-SGIVHDASSTGATLYIEPHAIVGLG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N E AE A+ +LT ++A + +++ ++ +DLA A+A ++ W+ P
Sbjct: 231 NQLKTYQRREQAEAEAVRRVLTEQVAAVKPDLEQVLAVATRLDLATAKARYSLWLQANPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+ SI + ++HPLL+ ++ E
Sbjct: 291 RFIDPNQ---RESITLRQLRHPLLVWQ------------------YQHEE---------- 319
Query: 254 SDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
D PV PI I+++ + +VV ITGPNTGGKT ++KTLGLA+LM+K GL++PAK LPWF
Sbjct: 320 -DAPVVPITIQIQPQIKVVAITGPNTGGKTVTLKTLGLAALMAKVGLFVPAKEPVELPWF 378
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILE-------------------LVSRE---- 349
+ ILADIGD QSLEQ+LSTFSGHI RI ILE L RE
Sbjct: 379 EQILADIGDEQSLEQSLSTFSGHIRRISRILEELENCRAPWRVSTDGGEDDLAQREPDTP 438
Query: 350 ----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+LVL+DEIG+GTDP+EG ALA ++L YL D L V TTHY +L LK +D RFEN
Sbjct: 439 HPTSALVLLDEIGAGTDPAEGSALAIALLNYLADHAQLTVATTHYGELKALKYQDERFEN 498
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF+ TL PTYR+LWG G SNAL IA+ +G ++ AQ LV + Q
Sbjct: 499 ASVEFNDVTLSPTYRLLWGIPGRSNALTIAERLGLKSDVVSLAQTLVGGSSEDVNQ---- 554
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
+ L +RR E++A+ A L + L++E+ +AK L R LK + Q VQ +
Sbjct: 555 -VISGLEAQRRDQETKAQEANQLLQQTERLHQEVSSKAKLLQERERELKLSQEQAVQDAI 613
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
AK +I V++ + +I K++ A+ I + H +F
Sbjct: 614 AQAKAEIAQVIRKLQQ------GPQIAQNAKKATDALKEIEQRH----IPKPPAKAKPAF 663
Query: 586 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 645
P+ G+++ + L ++ A V+ +D + V++G M++ V +I + K A P
Sbjct: 664 QPKVGDRIRIPRL-NQTAEVLTPADEDGELTVRFGLMKMTVSLADIESLEGQK---AHIP 719
Query: 646 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESR 705
+ S + + P ++T KN++DLRG RV +A +L+ A++ +
Sbjct: 720 V--------KSKPASTPAPAAASPPTPPIRTEKNTIDLRGSRVADAEVELEQAISKAIAS 771
Query: 706 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
VL++IHG GTG ++ V E L HP V ++E +++ G TVAY+K
Sbjct: 772 GVLWIIHGKGTGKLRAGVHEFLERHPLVDRFELAKQAEGGSGVTVAYLK 820
>gi|434384820|ref|YP_007095431.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
gi|428015810|gb|AFY91904.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
Length = 843
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 252/792 (31%), Positives = 405/792 (51%), Gaps = 118/792 (14%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+L+ L+ + ELE+ I CID + + DR+SE L +R + R R + L+SL
Sbjct: 116 PVLQGLVADVRTYPELEQDIYHCIDDRG-DVTDRSSEKLAQVRVQLKGLRDRIYKFLNSL 174
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+++ Q+ I +PLIT+R R + +KASHK +P G+ + S SG+T ++EP+
Sbjct: 175 IQR------QSNAIQQPLITQRGDRFVIPVKASHKDAIP-GVVHDSSGSGSTLYVEPQQI 227
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
+ N +L E E A+L LTA++ + ++++L+ IDLA A+A ++ W++
Sbjct: 228 INLGNQLRQLQRQEQREIEAVLMALTAKVTEVVEDLEHLLVVATTIDLATAKARYSLWLE 287
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ + I + ++HPLL+ +P+
Sbjct: 288 ANPPRFVDRAASEY---ITLRQLRHPLLI------WKHRHEEGSPV-------------- 324
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPID+ + + RVV ITGPNTGGKT ++KTL + +LM+K GL++PA+ +
Sbjct: 325 --------VPIDLSIRPDIRVVTITGPNTGGKTVTLKTLAIVALMAKVGLFIPAREPVEI 376
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV----------------------- 346
PWFDLILADIGD QSL+Q+LSTFSGHI RI IL+ +
Sbjct: 377 PWFDLILADIGDEQSLQQSLSTFSGHIRRIGRILDAIGEEGGERGAGSTSTTLSVSGGDE 436
Query: 347 ------------------------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
+ SL+L+DE+G+GTDP+EG ALA ++LQYL DR
Sbjct: 437 EMGSVRDDEETIDLQVSHSPIHPSTPSSLILLDEVGAGTDPAEGSALAIALLQYLADRAM 496
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
L + +THY +L LK +D+RFENA+ EF L PTYR+LWG G SNAL+IA+ +G +
Sbjct: 497 LTIASTHYGELKALKYQDSRFENASVEFDDVNLAPTYRLLWGIPGRSNALSIAQRLGLNP 556
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++I+ A+ V + Q+ +E+ L +RR E++A AA++ + Y E+ +
Sbjct: 557 EVIENAKSQV--ILGATQE--VNEVIAGLEAQRRTQETKASEAANVLKQAEAFYLEVSQK 612
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
A L R LK + + VQ + AK +I V++ QL+ + SE +
Sbjct: 613 AAQLQAREQELKVNQERAVQAAIAEAKGEIAQVIR----QLQQGPQTAQAAQQATSE--L 666
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
+ P + F P+ G+++ + +G K + EV D+ + V++G M
Sbjct: 667 DGVSSRRLPAKS---TPKPPVGFNPKVGDRIRIPKIGQKAEVLSEV-DDNGNLNVKFGIM 722
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
++ V +I + K A P P+ + + A+ ++TS N++D
Sbjct: 723 KMNVALADIESLTGEK----ATPPPK-------KSGAKVPGTAAPAAPPVAIRTSTNTVD 771
Query: 683 LRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QES 740
+RG RV A +++ A+ +++VIHG GTG ++E V E L +HP+V ++E E
Sbjct: 772 VRGQRVMNAETEIERAIGRAYQSGIMWVIHGKGTGKLREGVHEFLSHHPQVLRFELAGEK 831
Query: 741 PMNYGCTVAYIK 752
G T+AY+K
Sbjct: 832 DGGGGVTIAYLK 843
>gi|86609812|ref|YP_478574.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558354|gb|ABD03311.1| MutS2 family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 805
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 261/749 (34%), Positives = 407/749 (54%), Gaps = 81/749 (10%)
Query: 11 HRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 69
H + P L+ + ELE++I C++ + + D AS L +R +++R +
Sbjct: 131 HDHLPRLQTWVSTLRTYPELEQEIFRCLE-EHGEVRDSASPTLADLRQQQRRQRSQIQEQ 189
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L+++ +Q QA + LI +R+ R + +KA+H+ L+ GI + S+SGAT ++EP
Sbjct: 190 LQQLMSQYPQA--LQDTLIGQRQGRFVLMVKATHRDLI-RGIVHDSSASGATLYVEPYAV 246
Query: 130 VEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE N R + +I AEE IL+ L+A++A ++++L ++ +D+A AR ++ W+
Sbjct: 247 VELGN-RWRETQVQIQAEEERILAALSAQVAAVATDLEHLQGVMVGLDVALARGRYSLWL 305
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+G P S + + + KHPLLL S AA+
Sbjct: 306 EGNRPQFVS-------AGLRLRQAKHPLLLWQS----RAAAP------------------ 336
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
S+G VPID + RVVVITGPNTGGKT ++KTLGL LM+KAG++LPA++ P+
Sbjct: 337 -SEGQGSAVVPIDFTLADSIRVVVITGPNTGGKTVALKTLGLLVLMAKAGIFLPAQDPPQ 395
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDILELVSRESLVLIDEIGSGTDPSE 365
LPWFD + ADIGD QSL+QNLSTFSGH ISRIV L+ +LVL+DE+G+GTDP+E
Sbjct: 396 LPWFDGVYADIGDEQSLQQNLSTFSGHIRRISRIVQALQSAPEPALVLLDEVGAGTDPTE 455
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G ALA +L+YL +R L + TTHY +L LK + FENA+ EF TL PTYR+LWG
Sbjct: 456 GAALAAGLLEYLSERALLTLATTHYGELKALKYQHPCFENASVEFDEVTLAPTYRLLWGI 515
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
G SNAL IA+ + D +I++RAQ+ L+ E Q R + L +R +LE +A
Sbjct: 516 PGRSNALAIAQRLQLDPEILRRAQR---HLQGESQVDR---VIAGLEAQRAQLEERAAQV 569
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
SLH E+ LY++++ ++ + R A L+ K+ Q++Q L A+ ++ ++ +
Sbjct: 570 GSLHRELESLYQQMQQRSRQIAEREARLEQKQNQELQALLAAARQEVAAAIRRLQQ---- 625
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
++ + E +A I + + P E F P+ G++V ++ LG + V
Sbjct: 626 --GEDPQRITAE----LAQIQQRYSPPPPPVDME-----FVPEVGDRVRLRGLG-QTGEV 673
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+ + G D +V+ G ++ V + + PI + K RQ A +
Sbjct: 674 IAIEG--DVYVVRSGILKFTVPRGQLDPIDEHQAKQ--------------RQRPKAPPPS 717
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLE 725
A+ ++TS+N+LDLRG V +A L+ A V ++IHG GTG +K V
Sbjct: 718 PAATAPLNLRTSQNTLDLRGKTVADAEAILEQHFAQAPPGPV-WIIHGHGTGRLKAGVQA 776
Query: 726 ILRNHPRVAKYEQESPMN--YGCTVAYIK 752
L+NHPRV ++ P + G TVA+++
Sbjct: 777 YLQNHPRVQRFSAADPEDGGTGVTVAHLQ 805
>gi|307152450|ref|YP_003887834.1| MutS2 family protein [Cyanothece sp. PCC 7822]
gi|306982678|gb|ADN14559.1| MutS2 family protein [Cyanothece sp. PCC 7822]
Length = 801
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 264/753 (35%), Positives = 410/753 (54%), Gaps = 83/753 (11%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
P+L+ L+ N E+E++I CI D + + DRAS L IR + K E + L+
Sbjct: 115 PVLKTLVANVRTYPEIEQEIHRCIEEDGE---VSDRASPRLREIRGQMKVVRERIYRKLQ 171
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ + Q+G + + +IT+R R + +KA K +P GI + SS+GAT ++EP VE
Sbjct: 172 DIMQR--QSGAMQESVITQRGDRFVLPVKAPQKDQVP-GIIHDSSSTGATLYIEPSSVVE 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
N + SE EE IL L+A++A+ + +++ L+ +DLA AR+ ++ W+ G
Sbjct: 229 LGNQLRQYHRSEQIEEETILRGLSAKVAEVKEDLEDLLAAATILDLAVARSRYSWWLKGN 288
Query: 192 CP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P + H++ ++HPLL+ + + E+
Sbjct: 289 PPRFIEPHEHITLRQ------LRHPLLIWQ---------------QQHEQGPEV------ 321
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI+++V+ + RVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK LP
Sbjct: 322 -------VPINVQVDPKIRVVAITGPNTGGKTVTLKTVGLAALMAKAGIFIPAKVPVELP 374
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---------SRESLVLIDEIGSGT 361
WF+ ILADIGD QSL+Q+LSTFSGHI RI+ I+E + + SLVL+DE+G+GT
Sbjct: 375 WFEQILADIGDEQSLQQSLSTFSGHIRRIIRIIEALNPTSEAPTTASSSLVLLDEVGAGT 434
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALATS+L+YL + GL + TTHY +L LK +D RFENA+ EF+ +TL PTYR+
Sbjct: 435 DPAEGSALATSLLKYLAEAAGLTIATTHYGELKALKYQDERFENASVEFNDQTLSPTYRL 494
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA +G II+ A R R + + L ++RR+ E +
Sbjct: 495 LWGIPGRSNALTIAGRLGLRPDIIEDA-----RTRVGGFSEDINRVIAGLEQQRREQEEK 549
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A+ A L + Y E+ +A L +R LK ++ Q++Q+ + AK +I V++
Sbjct: 550 AKEATQLLKQTERFYAEVSQKANALQQREKDLKQQQEQEIQKAIIAAKAEIAQVIR---- 605
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
QL+ + N+ +++ A+ I E P V + PQ GE+V + SLG +
Sbjct: 606 QLQQGTPTAQNA--QKATEALGKIAEKQLPKQKQPV-----KIYRPQVGEKVRIPSLG-Q 657
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
A V+ + + + V V++G M++ V +I + K + P K
Sbjct: 658 TAEVLNILEESEEVSVRFGIMKMTVPFRDIESLDGKKVE-----VPEKAKTAPPANPSPP 712
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKE 721
+ ++TS N++D+RG RV EA ++ A+A VL++IHG GTG +++
Sbjct: 713 PAPKSSPV----IRTSYNTVDIRGSRVVEAESDVEKAIARATESGVLWIIHGKGTGKLRQ 768
Query: 722 RVLEILRNHPRVAKYEQESPMN---YGCTVAYI 751
V E L HP+V ++E +P N G TVAY+
Sbjct: 769 GVHEFLERHPQVKRFEL-APQNEGGAGVTVAYL 800
>gi|298491014|ref|YP_003721191.1| MutS2 family protein ['Nostoc azollae' 0708]
gi|298232932|gb|ADI64068.1| MutS2 family protein ['Nostoc azollae' 0708]
Length = 825
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 249/777 (32%), Positives = 397/777 (51%), Gaps = 112/777 (14%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 73
EL+ ELE++I CID + + DRAS+ L E +R R + + L ++++
Sbjct: 119 ELVAELRTYPELEQEIHRCIDERAQVT-DRASQKLGEIREYLRKSRGQITQKLHNIIQA- 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
++G + +P+IT+R SR + +KA K +P GI + S+SGAT ++EP V
Sbjct: 177 -----KSGALQEPIITQRGSRYVIPVKAPQKDAVP-GIVHDTSTSGATLYIEPNSIVSMG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + E AEE AI LT ++A + +++ L+ V +D+A A+A ++ W+ P
Sbjct: 231 NQLRQAIRREQAEEEAIRRSLTEQVAAVKPDLEKLLAIVTTLDIATAKARYSFWIGANPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ I + ++HPLL+ +P+
Sbjct: 291 RFVNRQEQQI---ITLRQLRHPLLV------WQQHHEQGHPV------------------ 323
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
+P+D+ + +VV ITGPNTGGKT +++TLGLA+LM+K GL++PA+ +PWFD
Sbjct: 324 ----IPVDLLISPHIKVVTITGPNTGGKTVTLRTLGLAALMAKVGLFVPAREPVEIPWFD 379
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSR------------------------- 348
+LADIGD QSL+Q+LSTFSGHI RI IL +
Sbjct: 380 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALGTGDRGVGTRDWEMGEMRGDGGDGEGI 439
Query: 349 -----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
SLVL+DE+G+GTDP EG ALA ++LQYL D L + TTH+ +L LK
Sbjct: 440 FLMPNAQCTMPNSLVLLDEVGAGTDPVEGSALAIALLQYLADHAQLTIATTHFGELKALK 499
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
+D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++++ A+ V
Sbjct: 500 YEDIRFENASVEFNDATLSPTYRLLWGIPGRSNALAIALRLGLKPEVVEAAKSQVGEATD 559
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E Q + L +RR E++A A L + LY+E+ +A L R L+A +
Sbjct: 560 EVNQ-----VIAGLEAQRRSQETKAAEAQELLRQAEKLYKEVSQKATALQEREKDLRASQ 614
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
VQQ + AK +I V++ + A + E+ S ++ I E ++ +
Sbjct: 615 EVAVQQAIIQAKGEIAEVIRRLQQGKPTAQHAQ------EATSKLSEIAERYQ----PTP 664
Query: 578 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 637
F P+ G+++ ++ LG + A V+ P D V++G M++ V+ +I +
Sbjct: 665 PPKPKPGFMPKVGDRIRIRKLG-QTAEVLTAPNTDGEFSVRFGIMKMMVQLQDIESLEGQ 723
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
K + A P P A + + ++TS+N++DLRG RV +A + L+
Sbjct: 724 KPEPIAKPKP-------------APAVTTPPAPALAIRTSRNTVDLRGKRVVDAEYILEK 770
Query: 698 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A++ E+ L++IHG GTG +K+ V L HPRV+ +E +++ G T+A+++
Sbjct: 771 AIS--EADGPLWIIHGYGTGKLKQGVHAFLHQHPRVSHHEPAEQADGGTGVTIAHVE 825
>gi|428301815|ref|YP_007140121.1| MutS2 protein [Calothrix sp. PCC 6303]
gi|428238359|gb|AFZ04149.1| MutS2 protein [Calothrix sp. PCC 6303]
Length = 796
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 244/743 (32%), Positives = 397/743 (53%), Gaps = 72/743 (9%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
LL+L+ + E+E++I C+D + I DRAS+ L IRAE +++ + L+ +
Sbjct: 120 LLDLVADLRTYPEIEQEIHRCVDERGQIA-DRASQKLGDIRAELRKSRSQIIQKLQNILQ 178
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + + +IT+R R + +KASHK ++ GI + S+SG T ++EP V N
Sbjct: 179 --VKSNAVQENVITQRGDRYVIPVKASHKDVI-HGIVHDTSTSGVTLYIEPNSVVPMGNQ 235
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E EE I LTA++A + +++ L+ V +DLA A++ ++ W+ P
Sbjct: 236 LRQLIRKEEIEEEVIRRQLTAQVADIKDDLERLLAIVTTLDLATAKSRYSFWLKANPPRF 295
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ + +I + ++HPLL + E+
Sbjct: 296 VDRE---ANETITLRKLRHPLLEWQHQHE---------------QGHEV----------- 326
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
+P+D+ ++ ETRVV ITGPNTGGKT ++KTL LA+LM+K GL++PA+ LPWF+ +
Sbjct: 327 --IPVDLVIQPETRVVTITGPNTGGKTVTLKTLALAALMAKVGLFVPAREPVELPWFEQV 384
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALAT 371
LADIGD QSL+Q+LSTFSGHI RI IL ++ + SLVL+DE+G+GTDP EG ALA
Sbjct: 385 LADIGDEQSLQQSLSTFSGHIRRISRILNAITGDTVTPSLVLLDEVGAGTDPVEGSALAI 444
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L +L + V L + +TH+ +L LK +D RFENA+ EF TL PTY++LWG G SNA
Sbjct: 445 ALLHHLANHVLLTMASTHFGELKALKYQDERFENASVEFDDATLSPTYKLLWGIPGRSNA 504
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ A++ + E +E+ L +RR+ E++A A +L +
Sbjct: 505 LAIAQRLGLSVDVIEAAKQQMGGANDE-----VNEVIAGLEAQRRRQETKASEAQNLLHQ 559
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
LY+E+ +A +L+ R LKA + VQ + AK +I V++ Q +A E
Sbjct: 560 AEKLYKEVSAKATNLEEREQALKASQEVAVQNAIAQAKGEIAKVIKGL--QKGKPTAQEA 617
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+ P F P+ G+++ + +G + A V+ P
Sbjct: 618 QQATNTLNQISTQFIPKAAPKAPI--------GFIPKTGDRIRITKIG-QTAEVITPPNS 668
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
D + V++G M++ VK +I + K + A P ++R + A
Sbjct: 669 DGELNVRFGIMKMTVKLEDIESLDGKKPEPIAKP--------QNRTPPPPVTPPPPA--- 717
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
++TS+N++DLRG RV ++ LD A++ + +++IHG GTG ++E V L+ HP
Sbjct: 718 --IRTSQNTIDLRGKRVADSEIILDQAISTAAGQ--IWIIHGHGTGKLREGVHAYLKQHP 773
Query: 732 RVAKYE--QESPMNYGCTVAYIK 752
R++ E ++ G T+A+IK
Sbjct: 774 RISHTEPAAQADGGTGVTIAHIK 796
>gi|427712156|ref|YP_007060780.1| MutS2 family protein [Synechococcus sp. PCC 6312]
gi|427376285|gb|AFY60237.1| MutS2 family protein [Synechococcus sp. PCC 6312]
Length = 817
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 250/738 (33%), Positives = 389/738 (52%), Gaps = 86/738 (11%)
Query: 28 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 87
+LE++I CI + + +RAS L IR + ++ M + + + +
Sbjct: 153 QLEQEIHRCI-TEQGEVSERASPQLAAIR-QHQQQMRGQIHQ-QLQQIIQRKHSSLQDTV 209
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
IT+R R + +KA + +P GI +VS +GAT ++EP+ VE NN +L+ EE
Sbjct: 210 ITQRAERYVLPVKAPQRDAIP-GIVHDVSVTGATLYIEPQAIVELNNRLRQLARQGGQEE 268
Query: 148 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 207
I +L+ ++ + E++ ++ + ++DLA ARA + W++ P V D I
Sbjct: 269 YRIREVLSQQVTEVVLELQQGLELITQLDLAVARARYGLWLNANIP-----RFVELDEPI 323
Query: 208 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 267
++ ++HPLL+ P TV VPI + +
Sbjct: 324 HLRNLRHPLLIWQH-------HQEQGP----------TV-----------VPITVDIAPP 355
Query: 268 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 327
T+VV ITGPNTGGKTA++KTLGL +LM+KAGL +PA LPWF +LADIGD QSL+
Sbjct: 356 TKVVTITGPNTGGKTATLKTLGLVALMAKAGLMIPAAEPVELPWFRQVLADIGDEQSLQH 415
Query: 328 NLSTFSGHISRIVDILELVSRE------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
NLSTFSGHI I +ILE ++ E +LVL+DE+G+GTDPSEG ALA ++L +L D+
Sbjct: 416 NLSTFSGHIRTISEILEALTTEANPDNAALVLLDEVGAGTDPSEGTALAIALLTHLADQA 475
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ + TTHY +L LK +D RFENA+ EF ETL PTYR+LWG G SNAL IA+ +G +
Sbjct: 476 QITIATTHYGELKALKYQDPRFENASVEFDSETLAPTYRLLWGIPGRSNALAIAQRLGLN 535
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I A + + Q + +++ L +RR E++A TA+ L + L++E+
Sbjct: 536 PDVIAAAAQAL-----PADQDQVNQVIAGLEAQRRHQEAKASTASQLLSATEKLHQELLT 590
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + L +R HL+ + Q V ++ A+ +I +++ + + +S++
Sbjct: 591 KTEQLRQRELHLRQHQAQAVNTAIDQAQAEIAQLIKKL------QAGPQTAQAAAQSQAQ 644
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYG 620
++ I + P + + PQ GE+V + KL E+ G +DD + V+ G
Sbjct: 645 LSQIQAKYAPPAPKPI-----PGYIPQMGERVRIP----KLQQTGEIIGLEDDAIAVRLG 695
Query: 621 KMRVRVKKNNIRPIPNSKRK---NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
M+V VK +I + K + A P P+ S +N P ++T
Sbjct: 696 LMKVMVKLTDIESLAGEKPQISPKATQPPPQ----------ASTAKANVTI---PTLRTE 742
Query: 678 KNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
N+LD+RG RV A LD AL + +VL+VIHG GTG +++ V E LR+HP V K+E
Sbjct: 743 SNTLDIRGQRVAAAEILLDEALN--QGGTVLWVIHGHGTGKLRQFVHEHLRHHPLVEKFE 800
Query: 738 QESPMN---YGCTVAYIK 752
+P N G T+ Y +
Sbjct: 801 -FAPQNEGGRGATIVYFR 817
>gi|86607201|ref|YP_475964.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-3-3Ab]
gi|86555743|gb|ABD00701.1| MutS2 family protein [Synechococcus sp. JA-3-3Ab]
Length = 799
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 251/747 (33%), Positives = 399/747 (53%), Gaps = 84/747 (11%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
R L E + N ELE++I C+D + + D AS L +R + ++ + L+
Sbjct: 131 RLPRLQEWVSNLRTYPELEQEIFRCLD-EHGEVRDSASAALADLRRQHRQYRSQIQERLQ 189
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+V +Q QA + LI +R+ R + +KA+H+ L+ GI + S+SGAT ++EP VE
Sbjct: 190 QVMSQHPQA--LQDTLIGQRQGRFVLMVKATHRDLI-RGIVHDSSASGATLYVEPYAVVE 246
Query: 132 FNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
N +R + ++I AEE IL+ L+A++ ++++L ++ +++A ARA ++ W+ G
Sbjct: 247 LGN-RLRETQAQIQAEEERILAALSAQVGSVAEDLEHLQAVMVGLEVALARARYSLWLGG 305
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P + + + +HPLLL S + + + E+
Sbjct: 306 NRPQF-------VPAGLRLRQARHPLLLWQS--------------REEGKGPEV------ 338
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
+PID + R VVITGPNTGGKT ++KTLGL LM+KAG++LPA++ P+LP
Sbjct: 339 -------IPIDFTLSESIRAVVITGPNTGGKTVALKTLGLLVLMAKAGIFLPAQDPPQLP 391
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGV 367
WFD + ADIGD QSL+Q+LSTFSGHI RI I++ + E +LVL+DE+G+GTDPSEG
Sbjct: 392 WFDGVYADIGDEQSLQQSLSTFSGHIRRISRIVQALQSEPAPALVLLDEVGAGTDPSEGA 451
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA +L+YL ++ L + TTHY +L LK + FENA+ EF TL PTYR+LWG G
Sbjct: 452 ALAAGLLEYLAEKALLTLATTHYGELKALKYQHPGFENASVEFDEATLAPTYRLLWGIPG 511
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA+ + + +I++RAQ + L+ E Q ++ L +R +LE +A S
Sbjct: 512 RSNALAIARRLHLEPEILRRAQ---QHLQGESQ---VDKVIAGLEAQRAQLEERAAQVGS 565
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ LYR+++ ++ + R A L+ ++ Q +Q L A+ ++ V+ +
Sbjct: 566 LHQELETLYRQMQQRSRQMAEREAQLEYRQQQGLQALLAAARREVAAAVRKLQQ------ 619
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
+ +AA +E R T F P+ G++V ++ LG + V+
Sbjct: 620 --------GDDPQQVAAELEQIRRRYSPPPPPVET-EFVPEVGDRVRLRGLG-QTGEVIA 669
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V G + +V+ G ++ V + + PI + K RQ A S
Sbjct: 670 VEG--EVYVVRSGILKFTVPRGQLDPIDEHQAKQ--------------RQRPKAPPSPPP 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ ++TS+N+LDLRG V +A L+ A V ++IHG GTG ++ V L
Sbjct: 714 TTAPLNLRTSRNTLDLRGKTVADAEAILEQHFAQAPPGPV-WIIHGHGTGRLRAGVQAYL 772
Query: 728 RNHPRVAKYEQESPMN--YGCTVAYIK 752
+NHPRV ++ P + G TVA+++
Sbjct: 773 QNHPRVQRFAPADPQDGGTGVTVAHLR 799
>gi|411117308|ref|ZP_11389795.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713411|gb|EKQ70912.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
Length = 865
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 271/810 (33%), Positives = 412/810 (50%), Gaps = 122/810 (15%)
Query: 10 FHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 69
+ ++ L L+++ ELE+ I CI +L+RAS L IR + K+ + + S+
Sbjct: 111 YPEFTVLNNLIQDLRTYPELEQDIHHCIGDHG-DVLERASLKLGNIREQLKQVRDRIYSI 169
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L + + +A I + +IT+R R + +KA K +P GI + S SGAT ++EP+ A
Sbjct: 170 LHSILQR--KAHAIQEHVITQRSGRFVLPVKAPQKDAIP-GIVHDTSMSGATLYIEPQSA 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V NN +L E EE AI L+ ++A + +++ LM V +DLA ARA ++ W+
Sbjct: 227 VNLNNQLRQLQRQEQVEEEAIRQRLSKKVADVKPDLERLMAIVTTLDLATARARYSDWLG 286
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P + S SSI + ++HPLL+ E E
Sbjct: 287 ANPPRFPNSS-----SSIVLRQLRHPLLVWQ-------------------EQHEQ----- 317
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
K + VPID+ ++ + RVV ITGPNTGGKT ++KT G+A+LM+K GL++PAK L
Sbjct: 318 GKAV----VPIDLVIQPQIRVVAITGPNTGGKTVTLKTFGIAALMAKVGLFVPAKEPAEL 373
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDIL---------ELVSRE-------- 349
PWFD ILADIGD QSL+Q+LSTFSGHI SRI++ L E+ S+E
Sbjct: 374 PWFDQILADIGDEQSLQQSLSTFSGHIRRISRILEALEGQKQEQEPEVRSQEPGDSNQGG 433
Query: 350 --------------------------------------SLVLIDEIGSGTDPSEGVALAT 371
SLVL+DE+G+GTDPSEG ALA
Sbjct: 434 YRVLGMDSPQPPIPNPYFPSSATKLQSLIPNPQSPVPLSLVLLDEVGAGTDPSEGSALAI 493
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+YL D GL + TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNA
Sbjct: 494 ALLKYLADHAGLTIATTHFGELKALKYQDPRFENASVEFDDVSLSPTYRLLWGIPGRSNA 553
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G II+ A+ V + + L E+RR+ E++++ A L
Sbjct: 554 LAIASRLGLKDTIIEAAKTYV-----GGATQDVNTVIAGLEEQRRQQETRSQEAEKLLKH 608
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF--ENQLRDASAD 549
LY+E+ +A L R L + Q VQ+ + AK I V++ Q A+
Sbjct: 609 AERLYQEVSRKAASLQEREKALHLGQEQAVQEAIAQAKRDIAQVIRQLQQGPQTAQAAQQ 668
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+L + SE + + + +P S F PQ G+++ + LG + A V+ +P
Sbjct: 669 ATEALNQISEQYLPSRQQQPKPK----------SGFCPQVGDRIRIPRLG-QTAEVLSIP 717
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ---EDRQSGSAGSSNE 666
+D + V++G M++ V ++ + + K A +R Q+ ++ + + +S
Sbjct: 718 DANDEITVRFGLMKMTVSLQDVESL--TGEKVAIEKKSDVRSQEIAGKNPPTPTVSASPM 775
Query: 667 EA-SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESR-SVLFVIHGMGTGVVKERVL 724
A P ++T+ N+LDLRG RV +A Q+D ALA S L++IHG GTG +++ V
Sbjct: 776 PAPPTAPLLRTTSNTLDLRGSRVADAEVQIDRALADLASTGGALWIIHGHGTGKLRQGVH 835
Query: 725 EILRNHPRVAKYEQESPMN--YGCTVAYIK 752
L H V ++E S + G TVAY++
Sbjct: 836 AFLEQHALVDRFELASREDGGSGVTVAYLR 865
>gi|16330262|ref|NP_440990.1| recombination and DNA strand exchange inhibitor protein
[Synechocystis sp. PCC 6803]
gi|383322003|ref|YP_005382856.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325172|ref|YP_005386025.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491056|ref|YP_005408732.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436323|ref|YP_005651047.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|451814420|ref|YP_007450872.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|3914083|sp|P73625.1|MUTS2_SYNY3 RecName: Full=MutS2 protein
gi|1652751|dbj|BAA17670.1| DNA mismatch repair protein; MutS [Synechocystis sp. PCC 6803]
gi|339273355|dbj|BAK49842.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|359271322|dbj|BAL28841.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274492|dbj|BAL32010.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277662|dbj|BAL35179.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407958177|dbj|BAM51417.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|451780389|gb|AGF51358.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
Length = 822
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 257/764 (33%), Positives = 389/764 (50%), Gaps = 92/764 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
L L+ L ELE+ I C+ D K + +RAS L IR + K E + L+K+
Sbjct: 124 LQTLVAEVRTLPELEQAIHHCLGEDGK---VAERASPKLGEIRQKLKAVREQIQQKLQKI 180
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ Q+ + + +IT+R R + IKA +K +P GI + S+SG T ++EP+ VE
Sbjct: 181 IQR--QSNALQEAVITQRGDRFVLPIKAGYKEQMP-GIVHDSSASGNTLYVEPQAIVELG 237
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + E EE IL L+ ++ + ++++L+ +DLA AR ++ W+ P
Sbjct: 238 NKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLAIATRLDLATARVRYSFWLGAHPP 297
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+ + I + ++HPLL + + A
Sbjct: 298 QWLTPGD---EKPITLRQLRHPLLHWQAEKEGGPAV------------------------ 330
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VPI + ++ + RV+ ITGPNTGGKT ++KTLGL +LM+K GLY+PAK +PWF
Sbjct: 331 ----VPITLTIDSQIRVIAITGPNTGGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFA 386
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSR------------------ESLVLID 355
ILADIGD QSL+QNLSTFSGHI RI+ IL+ + SLVL+D
Sbjct: 387 QILADIGDEQSLQQNLSTFSGHICRIIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLD 446
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 415
E+G+GTDP+EG ALA ++L++L D+ L V TTHY +L LK +D RFENA+ EF ++L
Sbjct: 447 EVGAGTDPTEGSALAIALLRHLADQPCLTVATTHYGELKALKYQDARFENASVEFDDQSL 506
Query: 416 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 475
PTYR+LWG G SNAL IA+ +G I+++A+ + + Q + L +R
Sbjct: 507 SPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKLGGFSEDINQ-----VIAGLESQR 561
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
R+ E +A A L E Y+++ +A L R LK+ + Q+VQQ + AK +I V
Sbjct: 562 REQEQKAANAQKLLQETEIFYQQVSQKAASLQARERELKSYQDQEVQQAIAAAKEEIAKV 621
Query: 536 VQDFENQLRDA----SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 591
++ + A A EI I+ + A A + P GE
Sbjct: 622 IRQLQRGKPSAQKAQQATEILGQIQAEQKAKVA---------------PKPIGYQPTVGE 666
Query: 592 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 651
++ + S G + A V +V TV V G M++ V +I + N K+ P P +
Sbjct: 667 RIRIPSFG-QTAEVTQVNATAQTVNVTLGLMKMTVPMADIESL-NGKK---VEPPP--KS 719
Query: 652 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVI 711
+ ++ + + E S V+T KN+LD RG R+E A +L+ AL VL++I
Sbjct: 720 EPVPKKVKAEPPATEAKSPPVLVRTEKNTLDCRGDRLERAESRLEKALNQALDAGVLWII 779
Query: 712 HGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 752
HG GTG +++ V E L +HP V Y +P N G T+AY++
Sbjct: 780 HGKGTGKLRQGVQEYLSHHPLVKSYAL-APQNDGGAGVTIAYLR 822
>gi|443318566|ref|ZP_21047815.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
gi|442781831|gb|ELR91922.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
Length = 786
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 259/741 (34%), Positives = 394/741 (53%), Gaps = 74/741 (9%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L+ L+ + ELE+ I CID + + DRAS L +R + K+ + + L+++
Sbjct: 114 PVLQGLVADLRTYPELEQSIHHCIDDRAQVT-DRASPKLGGLRTQIKQCRSEIYAKLQRI 172
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ Q+G I + +IT+R R + +KA K +P GI + S+SGAT ++EP VE
Sbjct: 173 LQR--QSGAIQEAVITQRGDRFVIPVKAPQKDAIP-GIVHDASTSGATLYVEPHSIVEMG 229
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E EE AI LTA++A +++ L+ V +DLA ARA + W+ G P
Sbjct: 230 NRLRQLQRQEKTEEEAICRALTAQVAAVATDLERLLAIVTALDLAAARARYGLWLQGNAP 289
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + ++HPLL + + +V
Sbjct: 290 -----QFITPGEQTTLRHLRHPLLW----------WQHHHEAGPEV-------------- 320
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VPID+ V RVV ITGPNTGGKT ++KTLGLA+LM+KAG+Y+PAK LPWFD
Sbjct: 321 ----VPIDVVVNPRLRVVAITGPNTGGKTVTLKTLGLAALMAKAGMYVPAKEPVELPWFD 376
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE--SLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QS+EQ+LSTFSGHI RI +L + E +LVL+DE+G+GTDPSEG ALA
Sbjct: 377 QVLADIGDEQSIEQSLSTFSGHIKRISRVLAALETEGNALVLLDEVGAGTDPSEGSALAI 436
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+YL D+ V TTHY +L LK +D RFENA+ EF TL PTYR+LWG G SNA
Sbjct: 437 ALLRYLADQARFTVATTHYGELKALKYQDDRFENASVEFDENTLSPTYRLLWGIPGRSNA 496
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA+ +G +I+ +AQ V +++ L +R++ E++A AA+L AE
Sbjct: 497 LTIARRLGLAAEIVDQAQNYVGL----GSGQDVNQVIAGLEAQRQQQETKAAAAAALLAE 552
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ +A L R L+ ++ VQ + A+ +I V++ + +
Sbjct: 553 TEKLHAEVSRKAAFLKERERELQQQQQAAVQAAVTEARAEIAQVIRRLQQ------GEPT 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ +A+AAI HRP F P+ G+++ + SLG + A V+ P
Sbjct: 607 AQSAQKATAAVAAIAARHRP-----APPPKPVGFRPRVGDRLRIPSLG-QTAEVLTDPDG 660
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
D V++G M++ V ++ + K E
Sbjct: 661 DGKFAVRFGIMKMTVSLEDVESLQGEK--------------AELPAPKPPAPDPTPPPPA 706
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
P ++TS N+ DLRGMRV EA L+ A+A + +++IHG GTG ++ V E L++HP
Sbjct: 707 PAIRTSNNTFDLRGMRVHEAEALLEDAIAS--ALGPIWIIHGHGTGKLRRGVQEFLQHHP 764
Query: 732 RVAKYE--QESPMNYGCTVAY 750
++ ++E ++ G T+AY
Sbjct: 765 QIQRFEPADQADGGTGVTIAY 785
>gi|115461374|ref|NP_001054287.1| Os04g0680700 [Oryza sativa Japonica Group]
gi|113565858|dbj|BAF16201.1| Os04g0680700 [Oryza sativa Japonica Group]
Length = 497
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 235/318 (73%), Gaps = 20/318 (6%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y+PLL+++++C+FLTEL ++I FC+D L ++LDRAS+ L IR ER++N++ L+SLL+
Sbjct: 188 YTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDMLESLLRD 247
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ +IFQ GGID P++TKRRSRMCVG+KASHK+L+P GI L+ S SGATYFMEP+ A+
Sbjct: 248 TSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRL 307
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NNMEV+LS E AEE AIL LLT+ IA SE +I++LM ++LE+DLA AR +A W++ V
Sbjct: 308 NNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYALWINAVR 367
Query: 193 PILS-----SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + +Q + + + S+ IEGI+HPLLL SL + E++ + G
Sbjct: 368 PAFTDRDSDTQLNPNSECSVFIEGIQHPLLLEQSLSMVK-------------ESTRVGKG 414
Query: 248 SLSKG--ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
LS +S P+P+D++V +TR++VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK
Sbjct: 415 QLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKG 474
Query: 306 HPRLPWFDLILADIGDHQ 323
PRLPWFD +LADIGDHQ
Sbjct: 475 TPRLPWFDQVLADIGDHQ 492
>gi|318042364|ref|ZP_07974320.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0101]
Length = 861
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 244/752 (32%), Positives = 394/752 (52%), Gaps = 82/752 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
+++ L ELE+++ FCI+ + DRAS L +R + R+ + L+ LL++ A
Sbjct: 174 MVEGLRTLPELEQRLRFCIEDGGRVA-DRASSPLAQLRRQIASARQERRDRLNDLLRRYA 232
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + + +I +R R + +KA LP G+ + S+SG+T F+EP+ + N
Sbjct: 233 ALLQDS------VIAERNGRPVLAVKAGLAGQLP-GLVHDSSASGSTVFIEPQAVIPLGN 285
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+L E A+L L+A + + +++L +L++D A ARA + W+ V P
Sbjct: 286 RLRQLEGEAREAERAVLQELSALVGDEQAALEHLQQVLLQLDAALARARYGAWLGAVRPE 345
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + + + +EG++HPLLL R ++P+
Sbjct: 346 LVADPL----APLRLEGLRHPLLLWQERRE------GTHPV------------------- 376
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VP+ ++V RVV ITGPNTGGKT ++K++GLA+LM++AGL+LP P+LPW
Sbjct: 377 ---VPVSVRVHEGLRVVAITGPNTGGKTVTLKSVGLAALMARAGLFLPCSGTPQLPWCAQ 433
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELV----------SRESLVLIDEIGSGTDPS 364
+LADIGD QSL+QNLSTFSGH+ RI ILE + SLVL+DE+G+GTDP+
Sbjct: 434 VLADIGDEQSLQQNLSTFSGHVRRIARILEALPPAAADLGAAPGASLVLLDEVGAGTDPT 493
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA ++L+ L +R L + TTH+ +L LK D RFENA+ F +ETL PTY + WG
Sbjct: 494 EGTALAIALLRQLAERARLTIATTHFGELKALKYNDARFENASVAFDVETLSPTYHLQWG 553
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNAL IA +G D ++++ AQ+L L P R + +++ L +R+K + A
Sbjct: 554 IPGRSNALAIASRLGLDGQVLEEAQQL---LAP-RGEGEVNQVIAGLENQRQKQQEAAEE 609
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AA+L A L+ E+ + ++A L+ + QQ+++ + + ++ +++ Q
Sbjct: 610 AAALLARTELLHEELLQRWQQQKEQSAELQEQRRQQLERSIRDGQKEVRRIIRRL-RQGH 668
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
D + + + + ++ + HRP + + + P G++V V SLG K
Sbjct: 669 DVDTTSLGETARRAGQRLKSLEQQHRPQPE----RRDHKGWRPALGDRVRVLSLG-KAGE 723
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGS 663
V+ + D + V+ G MR+ ++ + I + N PA P + K Q +S A
Sbjct: 724 VLALSADGRELTVRCGVMRLNLELSAIEGL------NGEKPAPPEVSKPQVQVRSRKAFG 777
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERV 723
P V+T +N++D+RGMRV EA ++ L + +VIHG+GTG +K +
Sbjct: 778 GRS-----PDVRTERNTVDVRGMRVHEAEAAVEEVLRS--ANGPTWVIHGIGTGKLKRGL 830
Query: 724 LEILRNHP---RVAKYEQESPMNYGCTVAYIK 752
L P RV+ EQ GC+V ++K
Sbjct: 831 RAWLDGLPYVERVSDAEQ-GDGGQGCSVIWLK 861
>gi|22300014|ref|NP_683261.1| recombination and DNA strand exchange inhibitor protein
[Thermosynechococcus elongatus BP-1]
gi|22296199|dbj|BAC10023.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
Length = 811
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 233/677 (34%), Positives = 368/677 (54%), Gaps = 74/677 (10%)
Query: 80 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 139
AG I +P++T+RR R + +KA+HK + GI ++S+SGAT ++EP+ ++ N +L
Sbjct: 204 AGAIQEPVVTQRRDRYVLAVKATHKDQIV-GIVHDLSASGATLYIEPQETIDLQNRLQQL 262
Query: 140 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
++ E E AI L+ ++A ++ YL+D + +D+A ARA ++ W+ G P SQ+
Sbjct: 263 AHQEAEVERAICQALSDQLATISDDLWYLLDVLTTLDVAVARARYSLWLQGNPPQFVSQT 322
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
++++ ++HPLL+ P+ VP
Sbjct: 323 R------LHLKALRHPLLVWQE------HHEQGQPV----------------------VP 348
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
IDI+++ T+VV ITGPNTGGKTA++KTLGLA+LM+KAGLY+PA LPWF I ADI
Sbjct: 349 IDIELQPATKVVTITGPNTGGKTATLKTLGLAALMAKAGLYVPAAAPVELPWFTGIWADI 408
Query: 320 GDHQSLEQNLSTFSGHISRIVDIL---ELVSRESLVLIDEIGSGTDPSEGVALATSILQY 376
GD QSL QNLSTFS HI I DIL E+ +LVL+DE+G+GTDPSEG ALA ++L+Y
Sbjct: 409 GDEQSLTQNLSTFSSHICNIRDILTELEVTGGNTLVLLDEVGAGTDPSEGTALAIALLRY 468
Query: 377 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 436
L + L TTHY +L LK +D+RFENA+ EF ETL PTYR+LWG G SNAL IA+
Sbjct: 469 LAEHASLTFATTHYGELKALKYQDSRFENASVEFDEETLAPTYRLLWGIPGQSNALAIAQ 528
Query: 437 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 496
+G I++ A+ L+ + + +E+ L+ +R+ E++ AA+L + LY
Sbjct: 529 RLGLYPSIVEEAKALL-----SKDSNSVNEMIMGLVAQRQAQEAKTTAAATLLRDTEALY 583
Query: 497 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 556
+EI A++L +R L+ ++ +QV+ L+ A+ +I ++ QL+ A++ E ++
Sbjct: 584 QEIATRAQELRQRQQQLRQQQEEQVRTALHQAQQEIAKII----AQLQRANSPE---QVQ 636
Query: 557 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
+++A+A I + P + F PQ G++V ++ ++ V+ V D ++
Sbjct: 637 AAQTALAQIENNYLPPP-------QPAGFIPQPGDRVRLRQW-QQVGEVLSVSQQGD-IV 687
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
VQ G ++ V P++ P K + + + ++T
Sbjct: 688 VQVGAVKFTVP-------PHAVESLQGEPVHLPSKPKPSSAPSPPTARTTVLA----IRT 736
Query: 677 SKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+LDLRG R EA L+ L + +++IHG G+G ++ V + L HP V Y
Sbjct: 737 EDRTLDLRGKRTHEAEPLLEEFLN--RQQGTVWIIHGHGSGALRRFVHQFLDQHPSVQSY 794
Query: 737 EQESP--MNYGCTVAYI 751
P G T+A +
Sbjct: 795 HLAPPEEGGRGVTIAQL 811
>gi|414077065|ref|YP_006996383.1| DNA mismatch repair protein [Anabaena sp. 90]
gi|413970481|gb|AFW94570.1| DNA mismatch repair protein [Anabaena sp. 90]
Length = 844
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 243/797 (30%), Positives = 402/797 (50%), Gaps = 127/797 (15%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L +L+ ELE++I CID + + DRAS+ + IR E ++ + L+ +
Sbjct: 115 PVLNDLVSQLRTYPELEQEIHRCIDERGEVT-DRASQKMGEIRVELRKIRSQITQKLQNI 173
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
++G I + LIT+R R + +KA K +P GI + S+SGAT ++EP V
Sbjct: 174 IQA--KSGAIQEQLITQRSDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPSSVVPLG 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N ++ E E AI LT ++A +++ L+ V +DLA A+A ++ W+ P
Sbjct: 231 NQLRQIFRKEQTEAEAIRRTLTEKVAAVTPDLERLLAIVTTLDLAVAKARYSLWIGSNPP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + I + ++HPLL+ NP+
Sbjct: 291 RFINRQD---NEIITLRNLRHPLLVWQQ------QHEQGNPV------------------ 323
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
+P+D+ + + RVV ITGPNTGGKT ++KTLGLA++M+K GL++PA+ +PWF
Sbjct: 324 ----IPVDLLISPQIRVVTITGPNTGGKTVTLKTLGLAAIMAKVGLFVPAREPVEMPWFS 379
Query: 314 LILADIGDHQSLEQNLSTFSGHI---SRIVDILE---LVSRES----------------- 350
+LADIGD QSL+Q+LSTFSGHI SRI++ LE + S+ES
Sbjct: 380 QVLADIGDEQSLQQSLSTFSGHIRRISRILEALEEKGVRSQESDFDFAQSNGVRRKKEEE 439
Query: 351 ----------------------------------LVLIDEIGSGTDPSEGVALATSILQY 376
LVL+DE+G+GTDP EG ALA ++L+Y
Sbjct: 440 EEVRRKEEEEEEEEKEKIKLPIPSPQSPVPSPQSLVLLDEVGAGTDPVEGSALAIALLKY 499
Query: 377 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 436
L + L + +TH+ +L LK ++ +FENA+ EF+ TL PTYR+LWG G SNAL+IA
Sbjct: 500 LANHTQLTMASTHFGELKALKYENPQFENASVEFNETTLSPTYRLLWGIPGRSNALSIAL 559
Query: 437 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 496
+G +++ A+ V E Q + L +RR E++A A + + LY
Sbjct: 560 RLGLKPEVVAEAKTQVGEATDEVNQ-----VIAGLEAQRRHQETKAAEAQKILRQAERLY 614
Query: 497 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 556
+E+ D+A L+ R L+A + VQQ + AK +I V++ + +A +
Sbjct: 615 KEVSDKAAALEAREKDLRASQEIAVQQAITQAKGEIAQVIRRLQKGTPNAQDAQ------ 668
Query: 557 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
++ ++++ I + + + + + F P+ G++V + LG + A V+ +P D
Sbjct: 669 QATASLSQIAQKY----EPAPPPKPKAGFMPKVGDRVRIPKLG-QTAEVLTIPDADGNFA 723
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
+++G M++ V+ +I + K P P ++ + + ++T
Sbjct: 724 IRFGIMKMTVQLQDIESLDGQK------PEPIVKTKPAPAVVTPPPAPA--------IRT 769
Query: 677 SKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+N++DLRG RV + + LD A++ E+ L++IHG GTG +K+ V L+ HPR+ Y
Sbjct: 770 SQNTVDLRGKRVADGEYILDKAIS--EAAGPLWIIHGHGTGKLKQGVHAFLQQHPRITHY 827
Query: 737 EQESPMN--YGCTVAYI 751
E + + G T+A+I
Sbjct: 828 EPAAQADGGSGVTIAHI 844
>gi|87301320|ref|ZP_01084161.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
gi|87284288|gb|EAQ76241.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
Length = 800
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 241/746 (32%), Positives = 394/746 (52%), Gaps = 77/746 (10%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 73
+L+ + L ELE+++ FC++ + + DRAS +L +R + R+ + L L+++
Sbjct: 121 QLMGDLRTLPELEQRLRFCLE-EGGRVADRASPELAGLRQQLAGLRQLRRDRLQELMRR- 178
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
Q G + +I +R R + +K + LP G+ + S+SG+T F+EPK +
Sbjct: 179 -----QGGLLQDSVIAERNGRPVLAVKVTAASQLP-GLVHDSSASGSTVFIEPKAVITLG 232
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L E EE +L+ L+A +A+ ++ L ++ +D+A ARA + QW+ V P
Sbjct: 233 NQIRELEGRERQEEWRVLASLSALVAEEAPALEELHRVLVALDVALARARYGQWLGAVRP 292
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
LS+ + + + ++HPLLL R E V
Sbjct: 293 ELSADPQ----APVLLRDLRHPLLLWQERR-----------------GGEAKV------- 324
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP+ + V E RVV ITGPNTGGKT ++K++GLA+LM++AGL+LP P+LPW
Sbjct: 325 ----VPVTVSVGAELRVVAITGPNTGGKTVTLKSVGLAALMARAGLFLPCSGTPQLPWCS 380
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSR-----ESLVLIDEIGSGTDPSEGVA 368
L+LADIGD QSL+QNLSTFSGH+ RI ILE + +LVL+DE+G+GTDP+EG A
Sbjct: 381 LVLADIGDEQSLQQNLSTFSGHVRRIARILEALDAPAAPGATLVLLDEVGAGTDPTEGTA 440
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA ++L++L +R L + TTH+ +L LK D+RFENA+ F +TL PTY + WG G
Sbjct: 441 LAIALLRHLAERARLTIATTHFGELKALKYADSRFENASVAFDSDTLSPTYHLQWGIPGR 500
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNAL IA +G D+ +I A L L P R + +++ + L ++RR+ + A AA+L
Sbjct: 501 SNALAIASRLGLDQAVIAEANGL---LAP-RGEGELNQVIRGLEDQRRRQQEAAEEAAAL 556
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
A L+ E+ + ++A L+ + Q ++ + + ++ +++ +LR
Sbjct: 557 LARTELLHEELLQRWQQQQEQSAELQEQRRQALEHSIRDGQQEVRRIIR----RLRQGGG 612
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
D +++ + + H P TS + P+ GE++ + SLG K A V+E+
Sbjct: 613 D--GERARQAGVRLKQLQVEHTPQPQ----RRATSGWRPEVGERIRLLSLG-KAAQVLEI 665
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D + V+ G +R++V + I + K P + + R G +
Sbjct: 666 SADGRELSVRCGVLRLQVDLSGIESLQGEKPSPPEPAQPLIEVRASGRHLGGS------- 718
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
GP+V++ +N++D+RGMRV EA ++ L + L+VIHG+GTG +K + + L
Sbjct: 719 --GPQVRSERNTVDVRGMRVHEAEAAVEEQLR--NANGPLWVIHGIGTGKLKRGLRQWLA 774
Query: 729 NHPRVAKYE--QESPMNYGCTVAYIK 752
+ P V + + GC+V + K
Sbjct: 775 SVPWVERVSDAERGDGGQGCSVIWPK 800
>gi|443477184|ref|ZP_21067049.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
gi|443017746|gb|ELS32124.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
Length = 678
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 222/627 (35%), Positives = 350/627 (55%), Gaps = 64/627 (10%)
Query: 13 YSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
Y P L++L + ++E++I CID + +LDRASE L IR E R + M L
Sbjct: 111 YCPNLQILASDLRTYPDVEQEIYRCID-EGGNVLDRASERLGEIRHELTSVRDQIMTKLQ 169
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+++++ A + + +IT+R R + +K+ + +P G+ + SS+G T F+EP
Sbjct: 170 NIMQR------NASSLQEQIITQRNDRYVLSVKSPQRDRVP-GVIHDTSSTGMTLFVEPN 222
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V+ NN +L E A+ IL+ L+A+I + +++ L+ V +IDLA ARA +A W
Sbjct: 223 SIVQSNNRLRQLLKMEQAQIEIILTELSAKITEIAEDLQRLLIIVTKIDLAVARARYAYW 282
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P H +I + ++HPLL+ + + E E+
Sbjct: 283 LGGNPP------HFLDQEAIVLRQLRHPLLVWQ---------------QKNEEGREV--- 318
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VP+D+ + + VVVITGPNTGGKTA++KT GLA+LM+KAG+++PA+
Sbjct: 319 ----------VPVDVLISPQISVVVITGPNTGGKTATLKTFGLAALMAKAGMFIPAREPV 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+PWFDL+LADIGD QSL+QNLSTFSGHI RI ILE +S +SLVL+DE+G+GTDPSEG
Sbjct: 369 EMPWFDLVLADIGDEQSLQQNLSTFSGHIRRIGRILEALSPQSLVLLDEVGAGTDPSEGS 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
A+AT++L+YL D LA+ TTH+ +L LK ++ +FENA+ EF +L PTYR+LWG G
Sbjct: 429 AIATALLEYLGDHTRLAIATTHFGELKALKYQNPKFENASVEFDDASLAPTYRLLWGIPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA +G + I+ AQ +R +++ L +RR+ + AA
Sbjct: 489 RSNALAIAGRLGLPQDILAAAQ-----VRVGIGSAEMNDVIAELEAQRREQTQKTEAAAH 543
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E L++EI D A+ + +A L+ ++ ++V + A+ ++ V++ + Q A+
Sbjct: 544 LLVETERLHKEILDRAEMMRSQAKELRERQEKEVNAAIAQAQKEVGRVIRKLQ-QGEQAA 602
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
D ++ +E I + + H P+ T G++V + G K+A V+
Sbjct: 603 TD-----VQHTERRIEELTKRHLPE-----MPPAKPKLTLNIGDRVRIPKFG-KIAQVLT 651
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPI 634
VP V+ G+M++ V ++ PI
Sbjct: 652 VPNGAGDFSVRLGQMKLSVNLSDTEPI 678
>gi|254432766|ref|ZP_05046469.1| MutS2 family protein [Cyanobium sp. PCC 7001]
gi|197627219|gb|EDY39778.1| MutS2 family protein [Cyanobium sp. PCC 7001]
Length = 804
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 249/762 (32%), Positives = 383/762 (50%), Gaps = 108/762 (14%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L+ L ELE+++ F ++ + + DRAS LE +R + R E L LL++ A
Sbjct: 122 LVAELRTLPELEQRLHFALE-EGGRVADRASAPLEAVRRQLKGLRAERRERLQELLRRHA 180
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ +I +R R + +KA LP G+ + S+SG+T F+EP+ + N
Sbjct: 181 PLL------QDTVIAERNGRPVLAVKAGAAAQLP-GLVHDSSASGSTVFVEPQAVISLGN 233
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L E E A+L+ L+A + ++ L +L +D A ARA + W+ V P
Sbjct: 234 RLRDLEGRERELEQAVLAELSALVGAEAEALQQLHAVLLRLDAALARARYGAWLGAVRPD 293
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + H F ++ + HPLLL R A
Sbjct: 294 LEADPHAPF----SLVDLSHPLLLWQQRREQGHAV------------------------- 324
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VP+ I V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 325 ---VPVSITVGAELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCSGTPRLPWCGA 381
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALA 370
+LADIGD QSL+QNLSTFSGHI RI IL ++ +LVL+DE+G+GTDP EG ALA
Sbjct: 382 VLADIGDEQSLQQNLSTFSGHIRRIARILAALAEPRQGATLVLLDEVGAGTDPVEGSALA 441
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
T++L++L DR L + TTH+ +L LK D RFENA+ F ++TL PTYR+ WG G SN
Sbjct: 442 TALLRHLADRARLTIATTHFGELKALKYADPRFENASVAFDVDTLSPTYRLQWGIPGRSN 501
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS--- 487
AL IA+ +G ++++AQ L+E + E+ Q ++ LESQ +
Sbjct: 502 ALAIAQRLGLSEAVLEQAQALLE-------PGGEGEVNQVIV----GLESQRQRQQEAAE 550
Query: 488 -----------LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
LH E++ + + + + +A L+ + +Q+++ + + ++ ++
Sbjct: 551 EAAALLARTELLHEELLSRWHQQKQQ-------SAELQEQRRRQLERSIREGQQEVRRII 603
Query: 537 QDFENQLRDASA---DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 593
+ Q D SA ++ +++ + + HRP + + P+ G++V
Sbjct: 604 RRL-RQGGDRSAAGRGQLGETARQAGQRLKQLEHQHRPAPE----RREHGGWMPEVGDRV 658
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
V SLG K A V+ + + V+ G MR+ V I + K PAP L
Sbjct: 659 RVLSLG-KAAEVLALADGGRELTVRCGVMRLTVPLEGIEGLQGEK------PAPPL---P 708
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHG 713
E R G G S GP V+T +N++D+RG+RV EA ++ L + ++VIHG
Sbjct: 709 EVRIKGPRGLG----SRGPDVRTERNTVDVRGLRVHEAEAVVEEHLRG--ASGPVWVIHG 762
Query: 714 MGTGVVKERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 752
+GTG +K + + L P RVA Q GC+V +++
Sbjct: 763 IGTGKLKRGLRQWLTTVPYVDRVADAAQ-GDGGAGCSVIHLR 803
>gi|81299422|ref|YP_399630.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 7942]
gi|81168303|gb|ABB56643.1| MutS2 family protein [Synechococcus elongatus PCC 7942]
Length = 796
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 249/750 (33%), Positives = 393/750 (52%), Gaps = 84/750 (11%)
Query: 14 SPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDS 68
+P L+ ++ + ELE++I FCI+ + DRAS+ L IR ++++ ++ L+
Sbjct: 119 APTLQAIVADLRTYPELEQQIHFCIEDSGEVA-DRASDALLGIRQQQRQVRSQILDRLNR 177
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
LL+ + +FQ + +I++R R + +KA K +P GI + SSSG+T ++EP+G
Sbjct: 178 LLRN-QSNLFQ-----ELVISRRSDRYVLPVKAGQKEAVP-GIVHDSSSSGSTLYIEPRG 230
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
+E NN +L E E A+ L+ IA +++ L+ +DLA ARA + +
Sbjct: 231 VIELNNQLRQLQRREEVECEAVRRRLSEAIASVSGDLETLLAIATTLDLAVARARYGLHL 290
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ P ++ S SI + ++HPLLL + D + S
Sbjct: 291 EANRPRFTASSE-----SICLRQLRHPLLLWQQ--------------RQDPDRSV----- 326
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VP+ +++ +VV ITGPNTGGKT ++K+LGLA LM++AGL++PA+
Sbjct: 327 ---------VPVSFQLQPSLKVVAITGPNTGGKTVTLKSLGLAGLMARAGLFVPAREPVD 377
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL--VSRESLVLIDEIGSGTDPSEG 366
LPWF+ IL DIGD QSL+Q+LSTFSGHI RI ILE V+ SLVL+DE+G+GTDPSEG
Sbjct: 378 LPWFERILTDIGDEQSLQQSLSTFSGHIRRIGRILEALPVAGASLVLLDEVGAGTDPSEG 437
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA ++L+YL D L + TTHY +L LK +D RFENA+ EF TL PTYR+LWG
Sbjct: 438 SALAIALLRYLADHATLTIATTHYGELKALKYQDDRFENASVEFDDRTLSPTYRLLWGIP 497
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNAL IA+ +G ++ A+ +E R + L +RR E +A AA
Sbjct: 498 GRSNALIIAERLGLSPAVVAEARSQLEGGR----DRDVDAVIAGLEAQRRDQEEKAAAAA 553
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L + L+ E++ + +L R L+ ++ +Q E+ A+ ++ VV+ + +
Sbjct: 554 QLLQQTEKLHAELQAKTAELREREQSLRQQQEVAIQSEIEQARQRVAKVVRRLQQGPKAT 613
Query: 547 SADEIN--SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
A+ S +S S A V A P F PQ G+++ + LG K+
Sbjct: 614 KAERARQASETLKSLSQPAVTVVAPPP------------GFQPQLGDRLRIPRLG-KVGE 660
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + D + V+ G +++ V ++ + K + + +
Sbjct: 661 VLAIAPDRQELTVRCGILKLTVSYGDVESLQGEKVELPPP-------------PPKSTTP 707
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
P ++T +N+ D+RG RV EA L+ AL ++ +++IHG GTG +++ V
Sbjct: 708 PPPPKDAPAIRTDRNTFDVRGSRVSEAEVVLEDALR--QAIGPIWIIHGHGTGKLRQGVQ 765
Query: 725 EILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ LR HP VAK+E ++ G T+AY K
Sbjct: 766 QFLREHPLVAKFEAADQADGGNGVTIAYPK 795
>gi|317968912|ref|ZP_07970302.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0205]
Length = 811
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 241/750 (32%), Positives = 393/750 (52%), Gaps = 81/750 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L++ L ELE+++ FCI+ + DRAS L +R + R + L+ L+++ A
Sbjct: 127 LVEPLRTLPELEQRLRFCIEDGGRVA-DRASPPLSGLRRQLASVRMERRDRLNELIRRYA 185
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + ++ +R R + +KA LP G+ + S+SG+T F+EP+ + N
Sbjct: 186 ALL------QDTVVAERNGRPVLAVKAGAGSQLP-GLVHDSSASGSTVFIEPQAVIPLGN 238
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+L E E A+L L+A + + + +++L ++++DLA ARA ++ W+ V P
Sbjct: 239 RIRQLEGEEREAERAVLQELSALVGEEQPALEHLQQVLIQLDLALARARYSAWLGAVRPE 298
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + + + +EG++HPLLL R TV
Sbjct: 299 LEADPL----APLQLEGLRHPLLLWQERR-----------------QGGRTV-------- 329
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VP+ I+VE RVV ITGPNTGGKT ++K++GLA LM++AGL++P K P +PW
Sbjct: 330 ---VPVTIRVESSLRVVAITGPNTGGKTVTLKSVGLAVLMARAGLFVPCKGSPHVPWCQQ 386
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELV----------SRESLVLIDEIGSGTDPS 364
+LADIGD QSL+QNLSTFSGH+ RI ILE + + LVL+DE+G+GTDP+
Sbjct: 387 VLADIGDEQSLQQNLSTFSGHVRRIARILEALPAAGSDLATQAGAQLVLLDEVGAGTDPT 446
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA ++L+ L DR L + TTH+ +L LK D RFENA+ F +E+L PTY + WG
Sbjct: 447 EGTALAIALLKQLADRARLTIATTHFGELKALKYDDPRFENASVAFDVESLSPTYHLQWG 506
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNAL IA +G D ++ AQ L L P R + +++ L +R++ + A
Sbjct: 507 IPGRSNALAIATRLGLDGAVLDAAQAL---LAP-RGEGELNQVIAGLESQRQRQQEAAEE 562
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AA+L A L+ E+ + ++A L+ + +Q+++ + + ++ +++ + R
Sbjct: 563 AAALLARTELLHEELLMRWQQQKEQSAELQEQRREQLERSIRDGQKEVRRIIRRLRHG-R 621
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
+ E+ + + + + + HRP + + + P+ G++V V SLG K
Sbjct: 622 GTGSSELGESARRAGQQLKQLEQQHRPLPE----RRDHKGWLPKVGDRVRVLSLG-KAGE 676
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + D + V+ G MR+ ++ + I + K P P + S S
Sbjct: 677 VLSLSEDGRELSVRCGVMRLNLELSAIEGLQGEK------PEP-------PQAQVSIRSR 723
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
AS GP V+T +N++D+RGMRV EA ++ L + ++VIHG+GTG +K +
Sbjct: 724 RNPASRGPEVRTERNTIDVRGMRVHEAESAVEEHLRG--ANGPVWVIHGIGTGKLKRGLR 781
Query: 725 EILRNHPRVAKYEQ--ESPMNYGCTVAYIK 752
E L + P V + + GC+V ++K
Sbjct: 782 EWLSSVPYVERVTDAAQGDGGQGCSVIWVK 811
>gi|56750922|ref|YP_171623.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 6301]
gi|56685881|dbj|BAD79103.1| DNA mismatch repair protein MutS [Synechococcus elongatus PCC 6301]
Length = 796
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 248/750 (33%), Positives = 393/750 (52%), Gaps = 84/750 (11%)
Query: 14 SPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDS 68
+P L+ ++ + ELE++I FCI+ + DRAS+ L IR ++++ ++ L+
Sbjct: 119 APTLQAIVADLRTYPELEQQIHFCIEDSGEVA-DRASDALLGIRQQQRQVRSQILDRLNR 177
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
LL+ + +FQ + +I++R R + +KA K +P GI + SSSG+T ++EP+G
Sbjct: 178 LLRN-QSNLFQ-----ELVISRRSDRYVLPVKAGQKEAVP-GIVHDSSSSGSTLYIEPRG 230
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
+E NN +L E E A+ L+ IA +++ L+ +DLA ARA + +
Sbjct: 231 VIELNNQLRQLQRREEVECEAVRRRLSEAIASVSGDLETLLAIATTLDLAVARARYGLHL 290
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ P ++ S SI + ++HPLLL + D + S
Sbjct: 291 EANRPRFTASSE-----SICLRQLRHPLLLWQQ--------------RQDPDRSV----- 326
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VP+ +++ +VV ITGPNTGGKT ++K+LGLA LM++AGL++PA+
Sbjct: 327 ---------VPVSFQLQPSLKVVAITGPNTGGKTVTLKSLGLAGLMARAGLFVPAREPVD 377
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL--VSRESLVLIDEIGSGTDPSEG 366
LPWF+ IL DIGD QSL+Q+LSTFSGHI RI ILE V+ SLVL+DE+G+GTDPSEG
Sbjct: 378 LPWFERILTDIGDEQSLQQSLSTFSGHIRRIGRILEALPVAGASLVLLDEVGAGTDPSEG 437
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA ++L+YL D L + TTHY +L LK +D RFENA+ EF TL PTYR+LWG
Sbjct: 438 SALAIALLRYLADHATLTIATTHYGELKALKYQDDRFENASVEFDDRTLSPTYRLLWGIP 497
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNAL IA+ +G ++ A+ +E R + L +RR E +A AA
Sbjct: 498 GRSNALIIAERLGLSPAVVAEARSQLEGGR----DRDVDAVIAGLEAQRRDQEEKAAAAA 553
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L + L+ E++ + +L R L+ ++ +Q E+ A+ ++ VV+ + +
Sbjct: 554 QLLQQTEKLHAELQAKTAELREREQGLRQQQEVAIQSEIEQARQRVAKVVRRLQQGPKAT 613
Query: 547 SADEIN--SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
A+ S +S S A V A P F PQ G+++ + LG K+
Sbjct: 614 KAERARQASETLKSLSQPAVTVVAPPP------------GFQPQLGDRLRIPRLG-KVGE 660
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
++ + D + V+ G +++ V ++ + K + + +
Sbjct: 661 ILAIAPDRQELTVRCGILKLTVSYGDVESLQGEKVELPPP-------------PPKSTTP 707
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
P ++T +N+ D+RG RV EA L+ AL ++ +++IHG GTG +++ V
Sbjct: 708 PPPPKDAPAIRTDRNTFDVRGSRVSEAEVVLEDALR--QAIGPIWIIHGHGTGKLRQGVQ 765
Query: 725 EILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ LR HP VAK+E ++ G T+AY K
Sbjct: 766 QFLREHPLVAKFEAADQADGGNGVTIAYPK 795
>gi|119483388|ref|ZP_01618802.1| MutS 2 protein [Lyngbya sp. PCC 8106]
gi|119458155|gb|EAW39277.1| MutS 2 protein [Lyngbya sp. PCC 8106]
Length = 879
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 243/816 (29%), Positives = 398/816 (48%), Gaps = 133/816 (16%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL+ ELE++I CID + + DRA+ L IR + K + + +L+ +
Sbjct: 118 LAELVSELRTYPELEQEIHRCIDDRGDVT-DRANPKLTDIRIKLKSTRDRIYQILQSILQ 176
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ +AG I + LIT+R R + +KA KY +P GI + S+ G T ++EPK +E NN
Sbjct: 177 R--KAGAIQEQLITQRGDRFVIPVKAPQKYQVP-GIVHDTSAKGGTLYIEPKSTIELNNQ 233
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG----- 190
+L E EE A+ +L+ +IA+ + +++ L+ V IDLA +RA + W++
Sbjct: 234 LRQLQRREQLEEEAVRQVLSEQIAEVQPDLERLLVIVTTIDLAVSRARYGLWLEANPPTF 293
Query: 191 ----------VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 240
C + S F + + + ++HPLL+ + P+
Sbjct: 294 TNLKIQAEKVECVLPSDTDQTRFQNPVTLRQLRHPLLVWQQ------QNEQGTPV----- 342
Query: 241 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 300
VPID+ ++ RVV ITGPNTGGKT ++KT+G+A+LM+K GL+
Sbjct: 343 -----------------VPIDVTIKPSIRVVAITGPNTGGKTVTLKTIGMAALMAKVGLF 385
Query: 301 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS- 359
+PA+ LPWFDL+LADIGD QS+EQ+LSTFSGHI RI IL + ++ ++++
Sbjct: 386 IPAREPVELPWFDLVLADIGDEQSIEQSLSTFSGHIRRISRILNAIPSANIGTVNQLSIP 445
Query: 360 ------GTDPS------------------------------------------------- 364
GTD S
Sbjct: 446 VTHQQLGTDDSEVEPVQNQQEEVEIIEEVDSLETLKAKIKDPEDQISNSLILLDEIGAGT 505
Query: 365 ---EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
EG ALAT++LQYL + + + TTH+ +L LK +D RFEN++ EF +TL+PTYR+
Sbjct: 506 DPTEGSALATALLQYLANSAVVTIATTHFGELKALKYQDDRFENSSVEFDEKTLQPTYRL 565
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
LWG G SNAL IA+ +G +I++ A + + +++ L +R++ E++
Sbjct: 566 LWGIPGRSNALKIAQRLGLKSEILETAASYLGGTSQD-----VNDVIAGLEAQRKQQETK 620
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV---QD 538
A A+ L E L++E+ + L R LK ++ Q +++ L AK +I V+ Q
Sbjct: 621 AEEASKLLKETERLHQELIRKTALLKEREQELKREQEQAIKETLIQAKGEIAQVIRRLQQ 680
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
+ + +DA +++ + I E P E G+++ + S+
Sbjct: 681 GQPKAQDA---------QKATETLDKIAEQRLPSRQQKPPEKPKFKPK--VGDRIRIPSI 729
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G + A V+ P ++ ++V++G M++ + I + K A P +
Sbjct: 730 G-QTAEVMNEPDENGQLMVRFGIMKMSIGLAEIESLDGQK---AEIPTKSKSSDKAKSSK 785
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 718
A S E V+TSKN++DLRG R+ EA ++D L + +++IHG GTG
Sbjct: 786 SEATVSEPEKKA--TVRTSKNTIDLRGKRISEAEIEIDRMLGQMIDFAAIWIIHGKGTGQ 843
Query: 719 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
++ V E L+N+P V ++E ++ G T+AY+K
Sbjct: 844 LRRGVQEFLKNNPLVDRFELATQAEGGAGVTIAYLK 879
>gi|33866463|ref|NP_898022.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
WH 8102]
gi|33633241|emb|CAE08446.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 8102]
Length = 812
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 243/744 (32%), Positives = 390/744 (52%), Gaps = 80/744 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L+ L ELE+++ F I+ + I DRAS L +R + R+ + L LL+++A
Sbjct: 139 LIDTMVTLPELEQRLKFSIE-EGGRIADRASAPLAWLRQQWHGLRQERRDKLQDLLRRLA 197
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
F + +I +R R + +KA +P G + S+SG+T F+EP+ + N
Sbjct: 198 P--F----LQDSVIAQRHGRPVLAVKAGAVAQVP-GQVHDSSASGSTVFVEPRSVLTIGN 250
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L EE +L L+A +A + L+ +L++DLA AR + +++ G P
Sbjct: 251 RLTDLEGRIRDEERKVLIELSAVVADDHPVLLQLVSILLQLDLALARGRYGRFLGGTAPR 310
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
+ + + F E ++HPLL+ R+ A
Sbjct: 311 MEASAAAPF----RFETLRHPLLVWQHKRAGGPAV------------------------- 341
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI ++V + RVV ITGPNTGGKT ++K++GLASLM++AGL LP P LPW
Sbjct: 342 ---VPISMEVSVDLRVVAITGPNTGGKTVTLKSIGLASLMARAGLLLPCAGMPTLPWCAQ 398
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGHI RI ILE + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 399 VLADIGDEQSLQQSLSTFSGHIKRIGRILEALQSGPSPALVLLDEVGAGTDPSEGTALAT 458
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
S+L+ L DR L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNA
Sbjct: 459 SLLKALADRARLTIATTHFGELKALKYNDARFENASVAFNAETLSPTYELLWGIPGRSNA 518
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G D ++++ A +L L P S + + L E+R++ ++ A AA+L A
Sbjct: 519 LAIASRLGLDDQVLEEASQL---LAPAADGEVNS-VIRGLEEQRQRQQAAAEDAAALLAR 574
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + +++A + + Q++++ + + ++ ++++ +LRD AD
Sbjct: 575 TELLHDELLQRWQKQKQQSAERQEQGRQRLERSIRDGQKEVRSLIR----RLRDDRAD-- 628
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+ + + + + HRP+ + + P+ GE++ + +LG K A V+ + D
Sbjct: 629 GETARRAGQRLRRLEDRHRPEPE---RRQPLPGWRPEPGERIRLLALG-KAAEVLAISDD 684
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V+ G MR V+ + + + K + A P ++ ++ G
Sbjct: 685 GMQLTVRCGVMRSTVELSGVESLDGRKPEPPAKPVVKV-------------NARINPGSG 731
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+V+TS+N+LD+RGMRV EA ++ L + ++VIHG+GTG +K + L P
Sbjct: 732 AQVRTSRNTLDVRGMRVHEAEAAVEEHLRG--ANGPVWVIHGIGTGKLKRGLRAWLETVP 789
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
RV EQ GC+V +++
Sbjct: 790 YVERVTDAEQ-GDGGGGCSVVWVR 812
>gi|428220318|ref|YP_007104488.1| MutS2 family protein [Synechococcus sp. PCC 7502]
gi|427993658|gb|AFY72353.1| MutS2 family protein [Synechococcus sp. PCC 7502]
Length = 697
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 344/627 (54%), Gaps = 55/627 (8%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L+ + +LE++I CI+ + +L+RASE L IR + E + + L+ +
Sbjct: 116 LQALVSDVRTYPDLEKEIYHCIE-EGGTVLERASEKLGNIRRTSHQVREKIINTLQGIIQ 174
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ + + + +IT+R R + +KASHK + GI + S SG T +EP V NN
Sbjct: 175 R--KNNALQENIITQRGDRYVLSVKASHKDQI-QGIVHDASGSGLTLLIEPSSVVAGNND 231
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E E IL+ L+A++ ++ L+ + EIDLA ARA +A W+ P L
Sbjct: 232 LRQLVAREQREIEIILTQLSAKVTAVAEDLSRLLAILTEIDLAIARARYAYWLKANPPNL 291
Query: 196 SSQSHVSFDSS---INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
S S + I + ++HPLL+ + + S TV
Sbjct: 292 SKSQPQSLSQNPQLITLRNLRHPLLVWQ-----------------EQQESGRTV------ 328
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP+DI + E +VVVITGPNTGGKTA++KT GLA++M+KAG+++PA +PWF
Sbjct: 329 -----VPVDILISPEIKVVVITGPNTGGKTATLKTFGLAAIMAKAGMFIPAPEPVEIPWF 383
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
DLILADIGD QSL+QNLSTFSGHI RI ILEL++ SLVL+DE+G+GTDPSEG A+AT+
Sbjct: 384 DLILADIGDEQSLQQNLSTFSGHIRRIGRILELITPASLVLLDEVGAGTDPSEGSAIATA 443
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
+L++L + L + TTH+ +L LK ++ +FENA+ EF L PTY++LWG G SNAL
Sbjct: 444 LLEHLANHANLTIATTHFGELKTLKYQNPQFENASVEFDDVQLAPTYKLLWGIPGRSNAL 503
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME---ERRKLESQARTAASLH 489
IA+ +G II AQ V + SE+ + E +RR+ + + A L
Sbjct: 504 AIARRLGLPEDIISSAQNHV--------GYGSSEINLVIAELETQRRQQTEKTQAATILL 555
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
AE+ L++EI D+++ L + L+AK+ +V +N AK +I V++ + + D
Sbjct: 556 AEMEKLHKEISDKSQLLRSQYQELRAKQEIEVTAAINQAKKEIARVIRKLQ------AGD 609
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSV-SETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+ + +++ + I + H P + + P+ G+QV + L +K+ V+
Sbjct: 610 QSPQSAQHADNRMTQISKMHLPSQQKQPQANLEPIKYIPKLGDQVKIIKL-NKIGQVLST 668
Query: 609 -PGDDDTVLVQYGKMRVRVKKNNIRPI 634
+ + + V+ G M++ VK +I +
Sbjct: 669 GTNNSNEIGVRVGGMKMTVKIEDIEAV 695
>gi|148241412|ref|YP_001226569.1| mismatch repair ATPase [Synechococcus sp. RCC307]
gi|147849722|emb|CAK27216.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. RCC307]
Length = 793
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 240/747 (32%), Positives = 386/747 (51%), Gaps = 91/747 (12%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 74
LL+ L ELE+++ F I+ + + DRAS L +R ++R+ L L+++ A
Sbjct: 121 LLEGLRTLPELEQQLRFAIE-EGGRVADRASPPLAGLRRQLQSQRQERQSRLQELMRRWA 179
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
Q+ +I +R R + +KA L G + S+SG T F+EP+ V N
Sbjct: 180 NQL------QDSVIAQRHGRPVLAVKAGAAGSL-QGQVHDSSASGNTLFIEPQAVVGLGN 232
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L E EE +L L+A +A + + D + ++DL ARA + W+ + P
Sbjct: 233 RIAELEAQEQKEERRVLLQLSAAVAAEGDSLMAMQDCLAQLDLGLARARYGAWLGAIKPK 292
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L ++S ++ ++HPLL+ + A
Sbjct: 293 LGTESW-------QLKDLRHPLLVWQERQEAGTAV------------------------- 320
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VP+ +++E RVV ITGPNTGGKT ++K+LGLA+LM+++GL+LP P+LPW +
Sbjct: 321 ---VPVSLQIEPPLRVVAITGPNTGGKTVTLKSLGLATLMARSGLFLPCSGTPQLPWCEA 377
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR------ESLVLIDEIGSGTDPSEGVA 368
+LADIGD QSL+QNLSTFSGH+ RI ILE +SR +LVL+DE+G+GTDPSEG A
Sbjct: 378 VLADIGDEQSLQQNLSTFSGHVRRIARILEALSRLGAAPVPALVLLDEVGAGTDPSEGAA 437
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LAT++L++L D+V L+V TTH+ +L LK D+RFENA+ EF +LRPTYR+LWG G
Sbjct: 438 LATALLRHLADQVQLSVATTHFGELKALKYDDSRFENASVEFDEVSLRPTYRLLWGIPGR 497
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNAL +A+ +G ++ A++L++ E+ + + L E+R++ + A AA+L
Sbjct: 498 SNALAVARRLGLSEAVLGGAEQLMD----EQGTSSVNTVISGLEEQRQRQQEAAEEAAAL 553
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
L+ E++ + ++ + + QQ+ + + ++ +++ N D A
Sbjct: 554 LMRAELLHEELQQRWQQEQQQKQARQGEAQQQLVGSIREGRKEVRQLIRRLRNPKADGEA 613
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
++ + ++ + H P+ S + ++P G++V + SLG K A V+
Sbjct: 614 ------ARQVGQRLRSLEQEHAPE---SRPQRQHRGWSPAAGDRVRLLSLG-KAAEVLSC 663
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D + V+ G MR+ V I + K R+ Q R+S SA
Sbjct: 664 SDDGQELQVRCGVMRLTVPLTGIEGLQGEKPAPPEPAPVRI--QGRGRRSDSA------- 714
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSV---LFVIHGMGTGVVKERVLE 725
V+TS+N++D+RG+RV EA ++ L RSV L+VIHG+GTG +K + E
Sbjct: 715 -----VRTSRNTVDVRGLRVHEAEAAVEEQL-----RSVHGPLWVIHGVGTGRLKRGLRE 764
Query: 726 ILRNHPRVAKY--EQESPMNYGCTVAY 750
L + + ++ GCTV +
Sbjct: 765 WLSGLDYIERLVDAEQGDGGAGCTVVW 791
>gi|260434383|ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109]
gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Length = 799
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 246/744 (33%), Positives = 394/744 (52%), Gaps = 80/744 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L++ L ELE+++ F ++ + + DRAS L +R + R+ + L LL+++A
Sbjct: 126 LIETMVTLPELEQRLKFALE-EGGRVADRASSALSALRHQWNGLRQERRDKLQELLRRLA 184
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ + +I +R R + +KA +P G + S+SG+T F+EP+ + N
Sbjct: 185 PSLQDS------VIAERHGRPVLAVKAGAVSQVP-GQVHDSSASGSTLFVEPRSVLTMGN 237
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
V L + EE +L+ L+A +A+ + ++ + +DLA AR + +W+ GV P
Sbjct: 238 KLVELESRIRDEERKVLAELSALVAEEASVLNQVVAVLRALDLALARGRYGRWLGGVEPQ 297
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + S F G++HPLL+ R+ + P+
Sbjct: 298 LEAASEAPF----RFSGLRHPLLVWQHKRA------DGPPV------------------- 328
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI ++V E RVV ITGPNTGGKT ++K++GLA+LM++AG+ LP P LPW
Sbjct: 329 ---VPISLEVSPELRVVAITGPNTGGKTVTLKSIGLAALMARAGMLLPCSGQPSLPWCAQ 385
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI ILE + R +LVL+DE+G+GTDPSEG ALAT
Sbjct: 386 VLADIGDEQSLQQSLSTFSGHVKRIGRILEALHRGGSPALVLLDEVGAGTDPSEGTALAT 445
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNA
Sbjct: 446 ALLKALADRARLTIATTHFGELKALKYDDARFENASVAFNPETLSPTYELLWGIPGRSNA 505
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G D ++ +AQ+L L P S + + L E+R++ ++ A AA+L A
Sbjct: 506 LAIATRLGLDSDVLHQAQQL---LAPGGDGEVNS-VIRGLEEQRQRQQAAAEDAAALLAR 561
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + ++ A + + Q+++Q + + ++ T+++ +LRD AD
Sbjct: 562 TELLHEELLQRWQKQKQQTAQRQEQGRQRLEQSIRQGQKEVRTLIR----RLRDERAD-- 615
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + ++ + HRP + + + P G++V + +LG K A V+ + D
Sbjct: 616 GETARKAGQRLRSLEDHHRPTPERRAPKPG---WRPSVGDRVRLLALG-KAADVLAITDD 671
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V+ G MR V + + K + Q+ S G G
Sbjct: 672 GLQLTVRCGVMRTTVDLAAVESLDGRKPEPPPK-------PVVKVQARSVGGG------G 718
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+V+TS+N+LD+RGMRV EA ++ L C + ++VIHG+GTG +K + L P
Sbjct: 719 AQVRTSRNTLDVRGMRVHEAEAAVEECLRC--ADGPVWVIHGIGTGKLKRGLRAWLDTVP 776
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
RV EQ GC+V +++
Sbjct: 777 YVERVTDAEQ-GDGGPGCSVVWVR 799
>gi|403379972|ref|ZP_10922029.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. JC66]
Length = 788
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 231/709 (32%), Positives = 389/709 (54%), Gaps = 98/709 (13%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
++D AS++L IR E + R E L+ +++ + Q + P+IT R R + +
Sbjct: 145 VMDSASQELARIRQELRTGEARIREKLEQMIRTPSTQKM----LQDPIITIRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ + G+ + S+SGAT FMEP+ V+ NN LS E E IL +LTAE+A
Sbjct: 201 KQEYRSSI-GGMIHDQSASGATLFMEPQAVVQLNNRLRELSFKEEREIEKILGMLTAEVA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++ EI + +D + E+D FA+AG A+ P+++ + + I+ +HPL+
Sbjct: 260 EAADEIAFNLDILAELDFIFAKAGLAREFKATLPLMNDRGF------LKIKKGRHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+D VP+D+++ + + ++ITGPNTG
Sbjct: 312 ---------------------------------AADAVVPLDVELGNQFQSIIITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL SLM+ +GL++PA++ +L FD I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVTLKTIGLLSLMAMSGLFVPAEDSSQLCVFDGIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKD 398
+ IL+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+ + R+G +V TTHY++L
Sbjct: 399 ISILKEMTPKSLVLLDEVGAGTDPAEGSALAISILEAIH-RLGCRMVATTHYSELKAYAY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ NA+ EF ++TL PTYR+L G G SNA IA+ +G D+KII A+ V
Sbjct: 458 ERKGIVNASMEFDVQTLSPTYRLLVGVPGRSNAFAIAERLGLDKKIIDHARSQV-----G 512
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
R + +L E R E++ ++A L+AE+ L +++E E ++++ + L AK
Sbjct: 513 ADDQRVESMIATLEENRLSAEAERKSAEQLNAEVAALRQQLEKERSRMEQQRSQLLAKAE 572
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---- 574
QQ ++ + A+ + + +++ +LR + +E +S IKE + ++EA R D+
Sbjct: 573 QQAEEAVKKARQEAEQIIR----ELRQMAMEERSS-IKEHK-----LIEAKRKLDEAVPQ 622
Query: 575 -----FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
S S + + + + G++V V+SLG K VVE+ GD + V VQ G M++++ K
Sbjct: 623 LDKKPVSGSRSGSKARAIEPGDEVLVRSLGQK-GHVVELSGDKE-VTVQLGIMKMKIAKT 680
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
++ I + AP QQ+ +G S +E + ++ LDLRG +E
Sbjct: 681 DLEKI---------SAAPVKPVQQKTAVTGLKRSRDE---------SVRSELDLRGNNIE 722
Query: 690 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ ++D L + + +++IHG GTGV+++ + + LR H V +
Sbjct: 723 DSIIEVDRFLDESFLANLHQVYIIHGKGTGVLRQGIQDYLRKHRLVKSF 771
>gi|124022099|ref|YP_001016406.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9303]
gi|123962385|gb|ABM77141.1| putative DNA mismatch repair protein MutS family protein
[Prochlorococcus marinus str. MIT 9303]
Length = 828
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 238/744 (31%), Positives = 389/744 (52%), Gaps = 84/744 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL + + ELE ++ F ++ + + DR S L +R + R+ + L ++++ A
Sbjct: 157 LLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVIRRHA 215
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + +I R R + +KA+ LP G+ + S+SG+T F+EP+ + +N
Sbjct: 216 AML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVITLSN 268
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L ++ +L+ L+A +A+S I L + +L++DLA AR + QW+ GV P
Sbjct: 269 RLAELDGHIREQQQLVLAELSAAVAESGVSISRLGEVLLQLDLALARGRYGQWLGGVPPA 328
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L +++ F +++ ++HPLL+ R E+ E V
Sbjct: 329 LHAEAAAPF----SLQELRHPLLVWQHRR----------------EHGEAVV-------- 360
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
PI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +PW
Sbjct: 361 ----PISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPWCAQ 416
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+QNLSTFSGH+ RI ILE + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 417 VLADIGDEQSLQQNLSTFSGHVKRIGRILEALIEGPGPALVLLDEVGAGTDPSEGTALAT 476
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G SNA
Sbjct: 477 ALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDSETMLPTYRLQWGIPGRSNA 536
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L+IA +G D +I +AQ+L+ +E+ + L E+R ++ A AA+L A
Sbjct: 537 LSIAMRLGLDDAVIAQAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAALLAR 592
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + +++A L+ + Q+++ + + ++ +++ +LR+ AD
Sbjct: 593 TELLHEELLSRWQKQRKQSADLQEQGRQKLESSIREGQKEVRQLIR----RLREGRAD-- 646
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVVEVP 609
ESA A R D + + P+ GE++ + +LG K A V+ +
Sbjct: 647 ------GESARRAGQRLRRIQADHRIQPQRKQHIGWRPEVGERIRLLALG-KAAEVIAIS 699
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D + V+ G MR V+ + + + K P+P + +SG
Sbjct: 700 EDGKQLTVRCGVMRSTVELSGVESLDGLK------PSPPELVVKVKVRSG--------LG 745
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
G V+T++N++D+RG+RV EA ++ L S ++VIHG+G+G +K + + L
Sbjct: 746 RGTEVRTTRNTVDVRGLRVHEAEVAVEEHLRS--STGPIWVIHGIGSGKLKRGLRQWLET 803
Query: 730 HPRVAKYE--QESPMNYGCTVAYI 751
P V + +S GC+V ++
Sbjct: 804 VPYVERVNDADQSDGGAGCSVIWL 827
>gi|352095971|ref|ZP_08956918.1| MutS2 protein [Synechococcus sp. WH 8016]
gi|351677327|gb|EHA60476.1| MutS2 protein [Synechococcus sp. WH 8016]
Length = 805
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 237/745 (31%), Positives = 396/745 (53%), Gaps = 84/745 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL+N L ELE+++ F ++ + + +RASE LE +R + R+ + L ++L++
Sbjct: 134 LLENVATLPELEQRLKFALE-EGGRVANRASESLEELRLQWQVARQERRDRLQAVLRRWT 192
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ + A +I +R R + +KA P G+ + SSSG T F+EPK + N
Sbjct: 193 SLLQDA------VIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIGLGN 245
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V P
Sbjct: 246 RLAALDGRIREEERRVLAELSAAVAEQNDAIARLMAVLLKLDLALARGRYGQWLGAVPPR 305
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L +Q D+ I ++HPLL+ + A +
Sbjct: 306 LDAQP----DAPFQILELRHPLLVWQQRKEGGAPVVPVS--------------------- 340
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P K P LPW
Sbjct: 341 -------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCKGSPSLPWCAQ 393
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVS---RESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG ALA
Sbjct: 394 VLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPSPALVLLDEVGAGTDPSEGTALAI 453
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L + L + TTH+ +L LK D+RFENA+ F +TL PTY++LWG G SNA
Sbjct: 454 ALLRNLANCARLTIATTHFGELKALKYSDSRFENASVAFDSDTLSPTYQLLWGIPGRSNA 513
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +GFD +I++A++L L+P + + + L E+R++ ++ A AA+L A
Sbjct: 514 LAIATRLGFDSDVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAALLAR 569
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADE 550
L+ E+ + + +A + Q+++ + + ++ +++ +Q D +A
Sbjct: 570 TELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIRRLRDQKADGETARR 629
Query: 551 INSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+++ ES ++ E H P+ + P GE++ + +L DK A V+EV
Sbjct: 630 AGQRLRKLESNHRSVPERRHHPE------------WRPSVGERIRLLAL-DKAAEVLEVS 676
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D + V+ G MR V +++ + + + AA P + + + R G
Sbjct: 677 DDGQQLSVRCGVMRSMV---DLQAVESLDGRRAAPPEKPVVQVKARRGVG---------- 723
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
G +V+TS+N++D+RG RV EA ++ L + ++VIHG+GTG +K + + L +
Sbjct: 724 -GSQVRTSRNTVDVRGQRVHEAEAAVEELLRG--ANGPVWVIHGIGTGRLKRGLRQWLDS 780
Query: 730 HPRVAKY--EQESPMNYGCTVAYIK 752
P V + + GC+V +++
Sbjct: 781 LPYVERVGDADQGDGGPGCSVVWVR 805
>gi|78212059|ref|YP_380838.1| MutS2 family protein [Synechococcus sp. CC9605]
gi|78196518|gb|ABB34283.1| MutS2 family protein [Synechococcus sp. CC9605]
Length = 799
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 244/744 (32%), Positives = 391/744 (52%), Gaps = 80/744 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L++ L ELE+++ F ++ + + DRAS L +R + R+ + L LL+++A
Sbjct: 126 LIETMVTLPELEQRLKFALE-EGGRVADRASSALSALRHQWNGLRQERRDKLQELLRRLA 184
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ + +I +R R + +KA +P G + S+SG+T F+EP+ + N
Sbjct: 185 PSLQDS------VIAERHGRPVLAVKAGAVSQVP-GQVHDSSASGSTIFVEPRSVLTMGN 237
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L + EE +L+ L+A +A+ + ++ + +DLA AR + +W+ GV P
Sbjct: 238 KLAELESRIRDEERKVLAELSALVAEEASALNQVVAVLRTLDLALARGRYGRWLGGVEPQ 297
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + F S G++HPLL+ R+ + P+
Sbjct: 298 LEPAAEAPFRFS----GLRHPLLVWQHKRA------DGPPV------------------- 328
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI ++V E RVV ITGPNTGGKT ++K++GLA+LM++AG+ LP P LPW
Sbjct: 329 ---VPISVEVSPELRVVAITGPNTGGKTVTLKSIGLAALMARAGMLLPCSGQPSLPWCAQ 385
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES---LVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI ILE + R S LVL+DE+G+GTDPSEG ALAT
Sbjct: 386 VLADIGDEQSLQQSLSTFSGHVKRIGRILEALQRGSAPALVLLDEVGAGTDPSEGTALAT 445
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNA
Sbjct: 446 ALLKALADRARLTIATTHFGELKALKYDDARFENASVAFNPETLSPTYELLWGIPGRSNA 505
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G D ++ +AQ+L L P S + + L E+R++ ++ A AA+L A
Sbjct: 506 LAIATRLGLDSDVLHQAQQL---LAPGGDGEVNS-VIRGLEEQRQRQQAAAEDAAALLAR 561
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + ++ A + + Q+++Q + + ++ T+++ +LRD AD
Sbjct: 562 TELLHEELLQRWQKQKQQTAQRQEQGRQRLEQSIRQGQKEVRTLIR----RLRDERAD-- 615
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+ + + ++ + HRP + + + P G+ V + +LG K A V+ + D
Sbjct: 616 GETARRAGQRLRSLEDHHRPTPERRAPKPG---WRPAVGDHVRLLALG-KAADVLAITDD 671
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V+ G MR V + + K + + R +G G+
Sbjct: 672 GLQLTVRCGVMRTTVDLTAVESLDGRKPEPPPK----PVVKVHARSAGGGGT-------- 719
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+V+TS+N+LD+RGMRV EA ++ L + ++VIHG+GTG +K + L P
Sbjct: 720 -QVRTSRNTLDVRGMRVHEAEAAVEECLRS--ANGPVWVIHGIGTGKLKRGLRAWLDTVP 776
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
RV EQ GC+V +++
Sbjct: 777 YVERVTDAEQ-GDGGPGCSVVWVR 799
>gi|428218654|ref|YP_007103119.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
gi|427990436|gb|AFY70691.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
Length = 750
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 221/642 (34%), Positives = 347/642 (54%), Gaps = 54/642 (8%)
Query: 28 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 87
ELE+ I CID + +LDRASE L +RA ++ + + +L+ + + ++ + + +
Sbjct: 128 ELEQDIYRCID-ESGTVLDRASEKLGQLRASSRQVRDRIYGILQNIMQR--KSAALQENI 184
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
IT+R R + +KA K +P G+ + SS+G T F+EP V NN +L+ E AE
Sbjct: 185 ITQRSDRYVLSVKAPQKDKIP-GVVHDASSTGMTVFVEPHAIVTANNQLRQLAKQEQAEI 243
Query: 148 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 207
IL L+ ++A+ ++ L+ V EIDLA ARA +A W+ P + + D++
Sbjct: 244 EIILRQLSGQVAEVGEDLWRLLAIVTEIDLAIARARYALWLGANAPTFI--NFAAPDAAT 301
Query: 208 NIEGIKHPLLLGSS-----LRSLSAASSNS-------------------NPLKSDVENSE 243
+IE + SS L+S S NS + + +D+ ++
Sbjct: 302 DIESNQKESASQSSDVDQLLQSESDDPGNSQLVEPGDRPATSSLLKKPASKINADLPPAQ 361
Query: 244 MTVGSLSKGISDFP---------VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
+T+ L + + VP+D+ + E VVVITGPNTGGKTA++KT GLA+LM
Sbjct: 362 LTLRGLKHPLLVWQQQHEQGREVVPVDVLIAPEISVVVITGPNTGGKTATLKTFGLAALM 421
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
+K+G+++PA+ LPWFDL+LADIGD QSL+QNLSTFSGHI RI IL + ESL+L+
Sbjct: 422 AKSGMFVPAREPVELPWFDLVLADIGDEQSLQQNLSTFSGHIKRIGRILTAATAESLILL 481
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG A+A ++L+YL L V TTH+ +L LK FENAA EF
Sbjct: 482 DEVGAGTDPTEGSAIAKALLEYLATHACLTVATTHFGELKTLKYNHACFENAAVEFDDVK 541
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
L PTYR+ WG G SNAL IA +GF +I+++AQ V E + + L +
Sbjct: 542 LAPTYRLQWGIPGRSNALAIAARLGFPAEILEQAQDHVGFGSAEL-----NTVIADLEGQ 596
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 534
RRK E + + A+ L A+ LY EI +A L L+ + +V + + AK +I
Sbjct: 597 RRKHEDKLKQASKLLAQTEHLYVEISKKAAKLKESERELRQNQEIEVTEAIKQAKKEIAR 656
Query: 535 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS--FTPQFGEQ 592
V++ +L+ + E + +E + + + H P + + + P+ G++
Sbjct: 657 VIR----KLQKGDSPEA---VHFAERRVQELSKRHLPSQQPQPKTQSQAQQKYVPKVGDR 709
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
V V LG ++ V+ P + D + V+ G+M++ V +I +
Sbjct: 710 VRVPKLG-QVVQVLSEPTNADELSVRLGQMKMTVALRDIEKV 750
>gi|87125334|ref|ZP_01081180.1| MutS 2 protein [Synechococcus sp. RS9917]
gi|86167103|gb|EAQ68364.1| MutS 2 protein [Synechococcus sp. RS9917]
Length = 798
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 234/750 (31%), Positives = 383/750 (51%), Gaps = 95/750 (12%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LLK+ L +LE+++ F ++ + + DRAS L +R + R++ + L ++++ A
Sbjct: 128 LLKDVATLPDLEQRLKFSLE-EGGRVADRASAVLAGLRGQWQTVRQQRRDRLQEVIRRWA 186
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+Q+ +I +R R + +KA P G+ + S+SG+T F+EP+ V+ N
Sbjct: 187 SQL------QDTVIAERHGRPVLAVKAGAVAQCP-GMVHDSSASGSTVFVEPRQVVDLGN 239
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L EE +L+ L+A +A + L +L +DL+ RA + QW+ V P
Sbjct: 240 RLADLEGRIREEEQRVLAELSAAVAAEGEALTRLGAVLLVLDLSLTRARYGQWLGAVPPQ 299
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L + ++ + + ++HPLL+ R+ A
Sbjct: 300 LEADP----EAPLVLHDLRHPLLVWQERRAGGGAV------------------------- 330
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI ++V RVV ITGPNTGGKT ++K++GLA+LM++AGL+LP P LPW
Sbjct: 331 ---VPISVEVSSHLRVVAITGPNTGGKTVTLKSIGLAALMARAGLWLPCSGRPSLPWCAQ 387
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI ILE + + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 388 VLADIGDEQSLQQSLSTFSGHVKRIGRILEALHSGAAPALVLLDEVGAGTDPSEGTALAT 447
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ +L LK D RFENA+ F +TL PTYR+LWG G SNA
Sbjct: 448 ALLRSLADRARLTIATTHFGELKALKYSDPRFENASVAFDSDTLSPTYRLLWGIPGRSNA 507
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS---- 487
L IA +G D +I +AQ+L L P R + + + + L ++R++ ++ A AA+
Sbjct: 508 LAIATRLGLDADVIAQAQEL---LAP-RAEGDVNAVIRGLEDQRQRQQAAAEDAAALLAR 563
Query: 488 ---LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
LH E++ + E+ ++ +Q +Q L + V+ +LR
Sbjct: 564 TELLHEELLARWERQRQES-----------SQRQEQGRQRLETSIRDGQKEVRRLIRRLR 612
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
D AD +++ + + H+P + + P+ GE++ + SLG K A
Sbjct: 613 DGKAD--GETARQAGQRLRRLEADHKPRPE----RREHRDWRPEVGERIRLLSLG-KAAE 665
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + D + V+ G +R V + + + + ++G G+
Sbjct: 666 VLAISDDGCQLSVRCGVLRSTVDLAAVESLDGRRPAPPPP------VVKVKARAGGGGA- 718
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
+V+TS+N++D+RGMRV EA ++ L + ++VIHG+G+G +K +
Sbjct: 719 --------QVRTSRNTVDVRGMRVHEAESAVEEVLR--SASGPVWVIHGVGSGRLKRGLR 768
Query: 725 EILRNHPRVAKY--EQESPMNYGCTVAYIK 752
L P V K ++ GC+V + +
Sbjct: 769 AWLGTVPYVEKVCDAEQGDGGAGCSVVWPR 798
>gi|88807280|ref|ZP_01122792.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
gi|88788494|gb|EAR19649.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
Length = 794
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 240/746 (32%), Positives = 387/746 (51%), Gaps = 84/746 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL++ +LE+++ F I+ + + DRAS L+ +R + R R + L ++++ A
Sbjct: 121 LLRDVATFPDLEQRLKFAIE-EGGRVADRASPGLDGLRRQWQELRARRRDRLQDVIRRWA 179
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + +I +R R + +KA P G+ + S+SG+T F+EPK ++ N
Sbjct: 180 AHL------QDTVIAERHGRPVLAVKAGAGGQCP-GMVHDSSASGSTMFVEPKSVIDLGN 232
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+ EE +LS L+A +A+ +++LM +L++DLA AR + QW+ V P
Sbjct: 233 KLADVDGRIREEEQRVLSELSAAVAEQVEGLQHLMQVLLKLDLALARGRYGQWLGAVPPR 292
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L S + D+ + ++HPLL+ + P V +
Sbjct: 293 LES----AVDAPFELRTLRHPLLVWQE-------RNEQGPTVVPVSVEVSSS-------- 333
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
RVV ITGPNTGGKT ++K++GLA+LM++AGL++P P LPW
Sbjct: 334 -------------LRVVAITGPNTGGKTVTLKSIGLAALMARAGLWVPCSGSPTLPWCAQ 380
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI ILE + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 381 VLADIGDEQSLQQSLSTFSGHVKRIGRILEAIRSGPAPALVLLDEVGAGTDPSEGTALAT 440
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L V TTH+ +L LK D RFENA+ F ETL PTY +LWG G SNA
Sbjct: 441 ALLRTLADRARLTVATTHFGELKALKYSDARFENASVAFDSETLSPTYHLLWGIPGRSNA 500
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G + +I A+ L+ + + + + L E+R + ++ A AA+L A
Sbjct: 501 LAIATRLGLEGSVIDEARALLAPV----GDGEVNTVIRGLEEQRMRQQAAAEDAAALLAR 556
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + + +A + + Q+++ + + ++ +++ +LRD AD
Sbjct: 557 TELLHEELLQRWEKQKQHSAERQEQGRQRLETSIRAGQKEVRQLIR----RLRDDGAD-- 610
Query: 552 NSLIKESESAIAAIVEAHRPDD--DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
E+A A + +D + PQ G+++ + +LG K A V++V
Sbjct: 611 ------GETARQAGQRLRKLEDRHRPEPERRRHQGWRPQVGDRIRLLALG-KAAEVLKVS 663
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D + V+ G MR V+ + + + K A P ++R + R SGSA
Sbjct: 664 DDGLQLQVRCGVMRSTVELSAVESLDGRKPDPPAAPVVQVRVKAR-RGSGSA-------- 714
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
V+TS+N++D+RGMRV EA ++ L + ++VIHG+GTG +K + + ++
Sbjct: 715 ---EVRTSRNTVDVRGMRVHEAESTVEEVLRG--ASGPVWVIHGIGTGRLKRGLRDWFQS 769
Query: 730 HP---RVAKYEQESPMNYGCTVAYIK 752
P RV EQ GC+V +++
Sbjct: 770 LPYVERVVDAEQ-GDGGAGCSVVWVR 794
>gi|33863813|ref|NP_895373.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9313]
gi|33635396|emb|CAE21721.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9313]
Length = 828
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 235/744 (31%), Positives = 386/744 (51%), Gaps = 84/744 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL + + ELE ++ F ++ + + DR S L +R + R+ + L ++++ A
Sbjct: 157 LLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVVRRHA 215
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + +I R R + +KA+ LP G+ + S+SG+T F+EP+ + +N
Sbjct: 216 AML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVITLSN 268
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L ++ +L+ L+A +A++ I L + +L++DLA AR + QW+ GV P
Sbjct: 269 RLAELDGRIREQQQLVLAELSAAVAEAGVSIGRLAEVLLQLDLALARGRYGQWLGGVPPT 328
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L +++ F +++ ++HPLL+ R A
Sbjct: 329 LHAEAAAPF----SLQELRHPLLVWQHRRDHGEAV------------------------- 359
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +PW
Sbjct: 360 ---VPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPWCAQ 416
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+QNLSTFSGH+ RI ILE ++ +LVL+DE+G+GTDPSEG ALAT
Sbjct: 417 VLADIGDEQSLQQNLSTFSGHVKRIGCILEALNEGPGPALVLLDEVGAGTDPSEGTALAT 476
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G SNA
Sbjct: 477 ALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDGETMLPTYRLQWGIPGRSNA 536
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L+IA +G D +I AQ+L+ +E+ + L E+R ++ A AA+L A
Sbjct: 537 LSIAMRLGLDGAVIAHAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAALLAR 592
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + +++A L+ + Q+++ + + ++ +++ +LR+ AD
Sbjct: 593 TELLHEELLSRWQKQRKQSAALQEQGRQKLESSIREGQKEVRQLIR----RLREGRAD-- 646
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVVEVP 609
ESA A R D + + P+ GE++ + +LG K A V+ +
Sbjct: 647 ------GESARRAGQRLRRIQADHRIQPQRKQHMGWRPEVGERIRLLALG-KAAEVIAIS 699
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D + V+ G MR V+ + + + K P+P + +SG
Sbjct: 700 EDGKQLTVRCGVMRSTVELSGVESLDGLK------PSPPELVVKVKVRSG--------LG 745
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
G V+T++N++D+RG+RV EA ++ L S ++VIHG+G+G +K + + L
Sbjct: 746 RGAEVRTTRNTVDVRGLRVHEAEVAVEEHLR--SSTGPIWVIHGIGSGKLKRGLRQWLET 803
Query: 730 HPRVAKYE--QESPMNYGCTVAYI 751
P V + + GC+V ++
Sbjct: 804 VPYVERVHDADQGDGGAGCSVIWL 827
>gi|124025008|ref|YP_001014124.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. NATL1A]
gi|123960076|gb|ABM74859.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. NATL1A]
Length = 804
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 239/754 (31%), Positives = 393/754 (52%), Gaps = 99/754 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L ELLK+ L +L++ + F +D + I DRAS L +R R RN L K +
Sbjct: 130 LSELLKDVATLPDLQKLLEFGLD-EGGRIADRASPKLSELR--RYRNSVRLQR--KDILQ 184
Query: 76 QIFQ--AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I + G + +I++R R + KA + G+ + S+SG T ++EP+ +
Sbjct: 185 DIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQIK-GMVHDSSASGNTIYVEPQVVISIG 243
Query: 134 NMEVRLSNSEIA-EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N ++ +SEI+ EE +L+ + E+ + I +L++ +L+I+ A +RA +++W++GV
Sbjct: 244 NRLAKI-DSEISDEERRLLADWSKEVGLNAIVIAHLVEILLQIEFALSRARYSKWLNGVP 302
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
IL + H F+ I+ +HPLL+ + D + TV
Sbjct: 303 AILDQEEHSLFE----IKDFRHPLLVWN-----------------DFHEKKNTV------ 335
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP V + +VV ITGPNTGGKT ++K++GLA LM+KAGL LP PRLPW
Sbjct: 336 -----VPTSFDVAPDLKVVAITGPNTGGKTVALKSIGLAVLMAKAGLLLPCTGSPRLPWC 390
Query: 313 DLILADIGDHQSLEQNLSTFSGHI---SRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+ ADIGD QSL+QNLSTFSGHI SRI+D +++ +LVL+DE+G+GTDP+EG AL
Sbjct: 391 KNVFADIGDEQSLQQNLSTFSGHILRISRILDAIDVFPGTTLVLLDEVGAGTDPTEGTAL 450
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A ++LQ + +R L + TTH+ L LK D+RFENA+ F ET++PT+ + WG G S
Sbjct: 451 AMALLQVMANRARLTIATTHFGQLKALKYSDSRFENASVSFDSETIQPTFHLQWGIPGRS 510
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS-- 487
NA+ I+K +G D ++I AQK + PER + +++ Q L ++R + +S A AA+
Sbjct: 511 NAIEISKRLGLDEQVIISAQKFIN---PERVDN-VNQVIQGLEKQRERQQSAAEDAAALL 566
Query: 488 -----LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
LH E+++ +++ ++++ + + ++ Q+E V+ +
Sbjct: 567 AKTELLHEELLNSWQKQRQQSEEFNEQGRFKLESSIREGQKE-----------VRHLIKR 615
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
LRD +A + I + + I + +R D + +T S+TP+ GE+V + S+G K
Sbjct: 616 LRDQNASGETARI--AGQRLRQIEKGYRNDKRIN----HTQSWTPKIGEKVRLSSIG-KA 668
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK---RKNAANPAPRLRKQQEDRQSG 659
++ D + V G R +V + + K +N ++RK
Sbjct: 669 GEIISFSDDGMQLTVLCGVFRSKVNLTEVESLDGQKVEINQNVQVKTSQVRKNLS----- 723
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVV 719
V+T KN+LD+RG+RV EA ++ L L+VIHG+G+G +
Sbjct: 724 -------------LVRTKKNTLDVRGLRVHEAEGVIEEKLR--NCSGALWVIHGIGSGKL 768
Query: 720 KERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 751
K+ + + + P + K P + GC+V ++
Sbjct: 769 KKGLRKWFDSLPYIEKVADAEPHDGGPGCSVVWM 802
>gi|72383421|ref|YP_292776.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
gi|72003271|gb|AAZ59073.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
Length = 804
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 240/751 (31%), Positives = 393/751 (52%), Gaps = 93/751 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L ELLK+ L +L++ + F +D + I DRAS L +R R RN L K +
Sbjct: 130 LSELLKDVATLPDLQKLLEFGLD-EGGRIADRASPKLSELR--RYRNSVRLQR--KDILQ 184
Query: 76 QIFQ--AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
I + G + +I++R R + KA + G+ + S+SG T ++EP+ +
Sbjct: 185 DIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQIK-GMVHDSSASGNTIYVEPQVVISIG 243
Query: 134 NMEVRLSNSEIA-EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N ++ +SEI+ EE +L+ + E+ + I +L++ +L+I+ A +RA +++W++GV
Sbjct: 244 NRLAKI-DSEISDEERRLLADWSKEVGLNAIVIAHLVEILLQIEFALSRARYSKWLNGVP 302
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
IL + H F+ I+ +HPLL+ +D + TV
Sbjct: 303 AILDQEEHSPFE----IKDFRHPLLVW-----------------NDFYEKKNTV------ 335
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP V + +VV ITGPNTGGKT ++K++GLA LM+KAGL LP PRLPW
Sbjct: 336 -----VPTSFDVAPDLKVVAITGPNTGGKTVALKSIGLAVLMAKAGLLLPCTGSPRLPWC 390
Query: 313 DLILADIGDHQSLEQNLSTFSGH---ISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+ ADIGD QSL+QNLSTFSGH ISRI+D +++ +LVL+DE+G+GTDP+EG AL
Sbjct: 391 KNVFADIGDEQSLQQNLSTFSGHILRISRILDAIDVFPGTTLVLLDEVGAGTDPTEGTAL 450
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A ++LQ + +R L + TTH+ L LK D+RFENA+ F ET++PT+ + WG G S
Sbjct: 451 AMALLQVMANRARLTIATTHFGQLKALKYSDSRFENASVSFDSETIQPTFHLQWGIPGRS 510
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS-- 487
NA+ I+K +G D ++I AQK + PER + +++ Q L ++R + +S A AA+
Sbjct: 511 NAIEISKRLGLDEQVIISAQKFIN---PERVDN-VNQVIQGLEKQRERQQSAAEDAAALL 566
Query: 488 -----LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
LH E+++ +++ ++++ + + ++ Q+E V+ +
Sbjct: 567 AKTELLHEELLNSWQKQRQQSEEFNEQGRFKLESSIREGQKE-----------VRHLIKR 615
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
LRD +A + I + + I + +R D + +T S+TP+ GE+V + S+G K
Sbjct: 616 LRDQNASGETARI--AGQRLRQIEKGYRNDKRIN----HTQSWTPKIGEKVRLSSIG-KA 668
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
++ D + V G R +V + + K E QS
Sbjct: 669 GEIISFSDDGMQLTVLCGVFRSKVNLTEVESLDGQK--------------VEINQSVQVK 714
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKER 722
+S + V+T KN+LD+RG+RV EA ++ L L+VIHG+G+G +K+
Sbjct: 715 TSQVRKNLS-LVRTKKNTLDVRGLRVHEAEGVIEEKLR--NCSGALWVIHGIGSGKLKKG 771
Query: 723 VLEILRNHPRVAKYEQESPMNY--GCTVAYI 751
+ + + P + K P + GC+V ++
Sbjct: 772 LRKWFDSLPYIEKVADAEPHDGGPGCSVVWM 802
>gi|113953514|ref|YP_731592.1| MutS2 family protein [Synechococcus sp. CC9311]
gi|113880865|gb|ABI45823.1| MutS2 family protein [Synechococcus sp. CC9311]
Length = 805
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 235/744 (31%), Positives = 394/744 (52%), Gaps = 82/744 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL+N L ELE+++ F ++ + + +RASE LE +R + R+ + L +++++ +
Sbjct: 134 LLENVATLPELEQRLKFALE-EGGRVANRASESLEDLRLQWQVARQERRDRLQAVVRRWS 192
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ +I +R R + +KA P G+ + SSSG T F+EPK + N
Sbjct: 193 TLL------QDTVIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIGLGN 245
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V P
Sbjct: 246 RLAALDGRIRDEERRVLAELSAAVAEQNDVIDRLMAVLLKLDLALARGRYGQWLGAVPPR 305
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L +++ DS +I ++HPLL+ + A +
Sbjct: 306 LEAEA----DSPFHILELRHPLLVWQQRKEGGAPVVPVS--------------------- 340
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P P LPW
Sbjct: 341 -------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCNGSPSLPWCAQ 393
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG ALA
Sbjct: 394 VLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPAPALVLLDEVGAGTDPSEGTALAI 453
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L + L + TTH+ +L LK D+RFENA+ F ++L PTY++LWG G SNA
Sbjct: 454 ALLRNLANCARLTIATTHFGELKALKYSDSRFENASVSFDSDSLSPTYQLLWGIPGRSNA 513
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +GFD +I++A++L L+P + + + L E+R++ ++ A AA+L A
Sbjct: 514 LAIATRLGFDSGVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAALLAR 569
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + + +A + Q+++ + + ++ +++ +LRD AD
Sbjct: 570 TELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIR----RLRDQKAD-- 623
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNT-SSFTPQFGEQVHVKSLGDKLATVVEVPG 610
+ + + + HR SV E + P GE++ + +L DK A V+EV
Sbjct: 624 GETARSAGQRLRKLESKHR-----SVPERRLHPEWRPSVGERIRLLAL-DKAAEVLEVSD 677
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D + V+ G MR V ++ + + AA P + + + R SG
Sbjct: 678 DGQQLSVRCGVMRSMVDLQSVESLDG---RRAAPPEKPVVQVKARRGSG----------- 723
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
G +V+T++N++D+RG RV EA ++ L + ++VIHG+GTG +K + + L +
Sbjct: 724 GSQVRTARNTVDVRGQRVHEAEAAVEELLRG--ANGPIWVIHGIGTGRLKRGLRQWLDSL 781
Query: 731 PRVAKY--EQESPMNYGCTVAYIK 752
P V + + GC+V +++
Sbjct: 782 PYVERVGDADQGDGGPGCSVVWVR 805
>gi|116073767|ref|ZP_01471029.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
gi|116069072|gb|EAU74824.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
Length = 804
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 243/747 (32%), Positives = 394/747 (52%), Gaps = 86/747 (11%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 73
EL ELE+++ F ++ + + DRAS L +R + R++ + L ++++
Sbjct: 132 ELFNAVATFPELEQRLKFSLE-EGGRVADRASAALAGLRLQWQSLRQQRRDRLQDVMRRW 190
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+AQ+ +I +R R + +KA G+ + S+SG T F+EP+ +E
Sbjct: 191 SAQL------QDTVIAERHGRPVLAVKAGAVGHC-KGMVHDSSASGNTVFVEPQAVIELG 243
Query: 134 NMEVRLSNSE---IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
N RL+ E EE +L+ L+ + + + L + +L +DL ARA + QW+ G
Sbjct: 244 N---RLAAQEGRIREEEQRVLAELSTAVGEQHDPLTKLGEVLLLLDLTLARARYGQWLGG 300
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V P L + D+ +E ++HPLL+ R A DV
Sbjct: 301 VPPRLEADP----DAPFALEQLRHPLLVWQQKREYGA----------DV----------- 335
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI I V + RVV ITGPNTGGKT ++K++GLA+LM++AGL+LP + P LP
Sbjct: 336 -------VPISITVAGDLRVVAITGPNTGGKTVTLKSIGLAALMARAGLWLPCQGTPSLP 388
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGV 367
W L+LADIGD QSL+Q+LSTFSGH+ RI IL + + +LVL+DE+G+GTDPSEG
Sbjct: 389 WCALVLADIGDEQSLQQSLSTFSGHVKRIGRILAALDQGATPALVLLDEVGAGTDPSEGT 448
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALAT++L+ L DR L + TTH+ +L LK D+RFENA+ F ETL PTY++LWG G
Sbjct: 449 ALATALLRSLADRARLTIATTHFGELKALKYSDSRFENASVAFDSETLSPTYQLLWGIPG 508
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNAL IA +G D ++I++A+ L L P+ + + + L E+R++ ++ A AA+
Sbjct: 509 RSNALAIATRLGLDPQVIEQARGL---LSPQADGDVNA-VIRGLEEQRQRQQAAAEDAAA 564
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L A L+ E+ + ++++ + + Q+++ + + ++ +++ +LRD
Sbjct: 565 LLARTELLHEELLGRWERQRQQSSLQQEQGRQRLETSIRDGQKEVRRLIR----RLRDQK 620
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
AD +++ + + HRP + + PQ G+++ + +LG K A V+
Sbjct: 621 AD--GETARKAGQRLRRLEADHRP----APERRRHPDWRPQVGDRIRLLALG-KAAEVLS 673
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
+ D + V+ G MR V+ + + + K P P+ Q + R G G+
Sbjct: 674 ISDDGLQLTVRCGVMRSTVELSAVESLDGRK----PTP-PQATVQVKARGVGGRGAD--- 725
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
V+TS N++D+RGMRV EA ++ L + L+VIHG+GTG +K + + L
Sbjct: 726 ------VRTSSNTVDVRGMRVHEAESAVEERLRT--ATGPLWVIHGIGTGKLKRGLRQWL 777
Query: 728 RNHPRVAKYE--QESPMNYGCTVAYIK 752
P V + + GC+V Y +
Sbjct: 778 ETVPYVERVSDADQGDGGPGCSVIYPR 804
>gi|33239697|ref|NP_874639.1| mismatch repair ATPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237222|gb|AAP99291.1| Mismatch repair ATPase (MutS family) [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 805
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 234/761 (30%), Positives = 381/761 (50%), Gaps = 99/761 (13%)
Query: 13 YSPLLE-----LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNM 63
Y PL LL + L EL+ I F ++ + + DRASE L +R + R
Sbjct: 123 YDPLSRPIISSLLSDLATLPELQRLIEFGLE-EGGRVADRASEKLSELRRQVYILRIERR 181
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
+ L L++K + + +I +R +R + +K+ L I N S+SG T F
Sbjct: 182 DLLKDLIRKCNS------FLQDTVIAERYNRPVLALKSGAIDQLLGTIHDN-SASGNTVF 234
Query: 124 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 183
+EPK + N + EE +L+ + E+ + + ++ L +L ++ A ARA
Sbjct: 235 LEPKAVIPLGNRIEEFEAKILVEEQRLLAYWSEEVGTNFQVLESLSQILLRLEFALARAR 294
Query: 184 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
++ W+ GV P + + D+ I+ +HPLL+ E+ E
Sbjct: 295 YSNWLGGVAPQIRDEE----DAPFIIQEFRHPLLIWQ-------------------EHYE 331
Query: 244 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 303
D +PI +V + RVV ITGPNTGGKT ++K++GLA LM+K GL+LP
Sbjct: 332 Q---------GDVVIPISFEVSSDLRVVAITGPNTGGKTVTLKSIGLAILMTKLGLFLPC 382
Query: 304 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSG 360
P LPW + +LADIGD QSL+QNLSTFSGH+ RI+ IL+ + S S++L+DE+G+G
Sbjct: 383 VGEPSLPWCNQVLADIGDEQSLQQNLSTFSGHVVRIIRILDAIAIRSGPSIILLDELGAG 442
Query: 361 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 420
TDP+EG ALA ++L+ DR L + TTH+ +L LK D+RFENA+ F ET+RPTY
Sbjct: 443 TDPTEGTALAIALLKTFADRARLTIATTHFGELKALKYHDSRFENASVGFDSETIRPTYH 502
Query: 421 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 480
+ WG G SNAL IA+ +G D + RAQ L+ +++ Q L E+R++ +
Sbjct: 503 LQWGIPGKSNALAIARRLGLDHLVANRAQDLI----GSNGVDNVNQVIQGLEEQRQRQQD 558
Query: 481 QARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
A AA+ LH E+M + + +++D R ++EL + +
Sbjct: 559 AAEEAAALLARTEMLHDELMSRWHKQCQQSEDFQERG-----------RKELEISIREGQ 607
Query: 534 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 593
V++ +LRD SAD + +++ + I HR F N +++P+ G++V
Sbjct: 608 VEVRELIRRLRDRSAD--GEIARKTGQRLRRIENIHRQQKSFK----NERAWSPKAGDRV 661
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
+ S+G K V+ V D + V G R V + + + + ++ N + ++
Sbjct: 662 RLISIG-KAGEVISVSADGRQLTVMCGLFRSIVDLHAVESL-DGQKPNLPDSVVNIK--- 716
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHG 713
+ S ++T +N++D+RG+RV EA ++ L L+V+HG
Sbjct: 717 ----------TTTPLSNSANIRTKRNTVDVRGLRVHEAESVIEEKLR--NMVGPLWVVHG 764
Query: 714 MGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
+GTG +K+ + E L N V K ++ GC++ ++K
Sbjct: 765 IGTGRLKKGLTEWLDNLDYVEKITTAEQVDGGAGCSIIWLK 805
>gi|148240433|ref|YP_001225820.1| mismatch repair ATPase [Synechococcus sp. WH 7803]
gi|147848972|emb|CAK24523.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. WH 7803]
Length = 794
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 234/745 (31%), Positives = 386/745 (51%), Gaps = 82/745 (11%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
LL++ +LE+++ F I+ + + DRAS L+ +R + R + + L ++++ A
Sbjct: 121 LLEDVATFPDLEQRLKFAIE-EGGRVADRASPGLDGLRRQWQELRAKRRDRLQDVIRRWA 179
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
A + +I +R R + +KA P G+ + S+SG+T F+EPK ++ N
Sbjct: 180 AHL------QDTVIAERHGRPVLAVKAGAGGQCP-GMVHDSSASGSTVFVEPKVVIDLGN 232
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+ EE +L+ L+A +A+ +++LM +L++DLA AR + QW+ V P
Sbjct: 233 KLANVDGRIREEEQRVLAELSAAVAEQVEGLQHLMQVLLKLDLALARGRYGQWLGAVPPR 292
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L S + D+ ++ ++HPLL+ + P V +
Sbjct: 293 LES----AVDAPFELKTLRHPLLVWQE-------RNEQGPSVVPVSVEVSSS-------- 333
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
RVV ITGPNTGGKT ++K++GLA+LM++AGL++P P LPW
Sbjct: 334 -------------LRVVAITGPNTGGKTVTLKSIGLAALMARAGLWVPCTGSPTLPWCAQ 380
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGH+ RI ILE + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 381 VLADIGDEQSLQQSLSTFSGHVKRIGRILEAIRSGPAPALVLLDEVGAGTDPSEGTALAT 440
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L V TTH+ +L LK D RFENA+ F +TL PTY +LWG G SNA
Sbjct: 441 ALLRTLADRARLTVATTHFGELKALKYSDARFENASVAFDSDTLSPTYHLLWGIPGRSNA 500
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G + +I A+ L L P + + + L E+R + ++ A AA+L A
Sbjct: 501 LAIATRLGLETSVIDDARAL---LSPAGDGEVNT-VIRGLEEQRMRQQAAAEDAAALLAR 556
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + + +A + + Q+++ + + ++ +++ +LRD AD
Sbjct: 557 TELLHEELLQRWEKQKQHSAERQEQGRQRLETSIRAGQKEVRQLIR----RLRDDRAD-- 610
Query: 552 NSLIKESESAIAAIVEAHRPDD--DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
E+A A + +D + PQ G+++ + +LG K A V++V
Sbjct: 611 ------GETARKAGQRLRKLEDRHRPEPERRRHQGWRPQVGDRIRLLALG-KAAEVLKVS 663
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D + V+ G MR V+ + + + K A P +++ + R SGSA
Sbjct: 664 ADGLQLQVRCGVMRSTVELSGVESLDGRKPDPPAAPVVQVQVKAR-RGSGSA-------- 714
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
V+TS+N++D+RGMRV EA ++ L + ++VIHG+GTG +K + + ++
Sbjct: 715 ---EVRTSRNTVDVRGMRVHEAESAVEEVLRG--ASGPVWVIHGIGTGRLKRGLRDWFQS 769
Query: 730 HPRVAKY--EQESPMNYGCTVAYIK 752
V + + GC+V +++
Sbjct: 770 LAYVERVVDADQGDGGAGCSVVWVR 794
>gi|334118052|ref|ZP_08492142.1| MutS2 protein [Microcoleus vaginatus FGP-2]
gi|333460037|gb|EGK88647.1| MutS2 protein [Microcoleus vaginatus FGP-2]
Length = 909
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 250/811 (30%), Positives = 388/811 (47%), Gaps = 103/811 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L EL ELE++I CID + + DRA+ L IR + ++ + + +L+ +
Sbjct: 126 LKELAAQLRTYPELEQEIHRCIDDRAQVA-DRATPKLAGIRVQMRQLRDRIYQILQGILQ 184
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ Q+ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V NN
Sbjct: 185 R--QSNAVQEQLITQRSGRFVIPVKAPQKDAIP-GIVHDSSASGATLYVEPHSTVNLNNQ 241
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG----- 190
+ E AEE A+ LT ++A + ++ L+ V +DLA A+A ++ W+
Sbjct: 242 MRQFLRQEQAEEEAVRRALTEQVAAVKPDLDRLVVVVTTLDLAAAKARYSFWLQANPPKF 301
Query: 191 -------VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
+ P + + + E ++ LL +LRS +PL + E
Sbjct: 302 IELGEPELAPKNPEKEDEEKEEKEDEEKEENSQLLIRNLRSQITLRQLRHPLLVWQQQHE 361
Query: 244 MTVGSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
FPV P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+KAG+++
Sbjct: 362 ----------QGFPVVPVDLTIGPHIRVVAITGPNTGGKTVTLKTLGLAALMAKAGMFVA 411
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE------ 356
A+ LPWFD ILADIGD QSL+Q+LSTFSGHI RI ILE++ +S +E
Sbjct: 412 AREPVELPWFDNILADIGDEQSLQQSLSTFSGHIRRISRILEVLGNKSQAEGEETSNLPI 471
Query: 357 ----------------------------IGSGTDPSEGVALATSILQYLRDRVG------ 382
I P LA L D VG
Sbjct: 472 TNSQQQDQEVTDTQNTVSALPILKPKLQIPKAQSPISNSQLAIPKSLVLLDEVGAGTDPS 531
Query: 383 ----LAVVTTHY--------------ADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
LA+ Y +L LK +D+RFENA+ EF +++PTYR+LWG
Sbjct: 532 EGSALAIALLQYLAQHSLLTVATTHFGELKALKYQDSRFENASVEFDDNSMQPTYRLLWG 591
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNAL IAK +G I++ AQ V + Q + L +RRK E++AR
Sbjct: 592 IPGRSNALTIAKRLGLLASIVEEAQTYVGGASQDVNQ-----VIAGLEAQRRKQETKARE 646
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A L + L+RE+ +A L R LK + V + + AK +I +++ +
Sbjct: 647 ATQLLHQTEKLHREVSQKAAALQERERELKIAQEVAVNEAIGSAKSEIAQIIRRLQ---- 702
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
S ++ +++ + I E H P SF P+ G+++ + SLG + A
Sbjct: 703 --SGNQTAQNAQQATDTLNQISEKHLPSRQQPAKP--KPSFMPKVGDRIRIPSLG-QTAE 757
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ P ++ + V++G M++ VK I + K + A A + Q + + ++
Sbjct: 758 VLSGPDANEELSVRFGIMKMTVKLGEIESLDGQKPETKAQLAKAAAQAQALATAKAKQAA 817
Query: 665 NEEASYGPR--VQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKER 722
E A P ++T+ N++DLRG RV +A ++D AL+ VL++IHG GTG ++
Sbjct: 818 AEAAKPNPEIAIRTANNTIDLRGARVSDAEIEIDRALSKAVEYGVLWIIHGKGTGQLRRG 877
Query: 723 VLEILRNHPRVAKYEQESPM--NYGCTVAYI 751
V E L HP+V+++E S G TV Y+
Sbjct: 878 VHEFLATHPQVSRFELASQKEGGTGVTVVYL 908
>gi|159463342|ref|XP_001689901.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283889|gb|EDP09639.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1007
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 334/665 (50%), Gaps = 120/665 (18%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+ D ASE L +RAER+ N E L + ++ A Q+ Q G + ++ R R C+G++A
Sbjct: 221 VSDAASEALAAVRAERQANKERLRAEVEGWARQLQQKGAAEAGAVSLIRGRFCIGVRAGR 280
Query: 104 KYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
+ LP G + L SS+GAT ++EPK AVE NN E L+ E E +LS+L+ +AK
Sbjct: 281 QGELPKGSVRLGQSSTGATLYLEPKPAVELNNAEALLAEREEGEVVRVLSMLSTLLAKRA 340
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
++ L+D V +D+ ARA A+W+ GV P ++ +S + G HP+L+ L
Sbjct: 341 PQLMRLVDCVTALDVVAARAKHARWLSGVRPAFTADPS---ESPFWVPGALHPVLMQRGL 397
Query: 223 RSLSAASS-NSNPLKSDVENSE-------MTVGSLSKG-ISD------------------ 255
L S + N D + + +T G ++D
Sbjct: 398 PPLPQPPSVDDNRFDRDFQAAPAWELRRVLTPDGPRPGELADGSAAGRGSGGGAVDDRAA 457
Query: 256 -FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA----------- 303
P P+D++V VV ITGPNTGGKT ++KT GL +LM++AGL+LP
Sbjct: 458 LLPRPLDLRVPSSRAVVAITGPNTGGKTVTLKTAGLMTLMAQAGLFLPCDPTARAEAAAA 517
Query: 304 -KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
PRL WFD +LADIGD QSL+QNLSTFSGHI RI IL + SLVL+DE+GSGTD
Sbjct: 518 AAGTPRLAWFDRVLADIGDAQSLQQNLSTFSGHIRRIKQILAVAGPRSLVLLDEVGSGTD 577
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P EG ALA ++L L ++ L + TTH+A+L ++D R+ N + F TLRPTYR+
Sbjct: 578 PLEGAALARAVLDRLAEQAHLTLATTHHAELKRASEEDGRYVNVSMAFDTATLRPTYRLC 637
Query: 423 WGSTGDSNALNIAKSIGFDR---------------------------------------- 442
WG+ G SNAL+IA+++GFDR
Sbjct: 638 WGAAGASNALDIAETLGFDRWRCGCRAVVLEARKMAAMMAASASAAAATAEGGSSGEGRE 697
Query: 443 -KIIQRAQKLVERLRPERQQHR---KSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 498
I A+ LV+++ RQ R ++ Q L +R E +R A+L +E + RE
Sbjct: 698 SHIAGVARSLVQQIEDTRQDSRYCITNDALQELEGQRALRERHSRNQATL-SEALVQVRE 756
Query: 499 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIK 556
+E AA L+A ++ +E + V++ ++ F +Q +DA + ++
Sbjct: 757 LE---------AALLEAP--PEIVRERDGHAVRVQAALEAFAAGSQPQDA----VEEQLR 801
Query: 557 ESESAIAAIVEAHR-----PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-ATVVEVPG 610
E ES I A V A R DDD + P G+ V+V+S GD A VV V G
Sbjct: 802 EIESLIPAEVAALRGRGYVGDDD------DEELLRP--GDSVYVRSRGDMGDARVVSVKG 853
Query: 611 DDDTV 615
D TV
Sbjct: 854 DMVTV 858
>gi|357039259|ref|ZP_09101053.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355358158|gb|EHG05926.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 788
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 233/754 (30%), Positives = 386/754 (51%), Gaps = 92/754 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDS 68
Y+ L E+ +LE+ I I +LDRASE L IR + ++R + L+
Sbjct: 113 YTRLNEIAMGLGSFKDLEKMIASAI-APGGEVLDRASERLFNIRRRLASAQQRIKDRLNE 171
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+++ + Q + + P++T R R V +K ++ LP GI + S+SGAT F+EP
Sbjct: 172 IIRSTSYQKY----LQDPIVTMREGRYVVPVKQEYRSQLP-GIVHDQSASGATLFIEPMP 226
Query: 129 AVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN EVR L E E T IL+ L+A + + E+ Y ++ + +D A+A +++
Sbjct: 227 VVEANN-EVRGLMAEEKQEVTRILTELSAAVGRQAEELLYALENLARLDFIMAKARYSES 285
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+D P +++ ++ ++I +HPLL P+K+
Sbjct: 286 LDAWAPCIAT------EAKLDIRQGRHPLL----------------PVKA---------- 313
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPI I++ ++VITGPNTGGKT S+KT+GL LM+ +GL++PA++
Sbjct: 314 ----------VPISIQLGEAFDMLVITGPNTGGKTVSLKTVGLLVLMAHSGLHVPAEDGT 363
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+ FD + ADIGD QS+EQ+LSTFS H IV+IL+ +SLVL+DE+G+GTDP+EG
Sbjct: 364 LIGMFDQVFADIGDEQSIEQSLSTFSSHTINIVNILKKAGNKSLVLLDELGAGTDPTEGS 423
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA +IL LR + V TTHY +L + R ENA+ EF+ +TLRPTYR+L G G
Sbjct: 424 ALARAILDQLRQQGAKVVATTHYGELKSYAFANERVENASVEFNSQTLRPTYRLLIGRPG 483
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA IA +G + +IQRA+ + +Q + ++L + L R + E + A
Sbjct: 484 RSNAFEIALRLGLNESVIQRARGFL-----TEEQVQVADLMRELENARVQAEQEQAEAEK 538
Query: 488 LHAEIMDLYREIEDE-AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+ E + YRE E A+ + +R + + ++ + A+++ + +V++ L++
Sbjct: 539 IRRE-AEQYREQYMELAEKIRQRKDEIITRAVADSREMVKKARLEAEQLVEELRAALKEQ 597
Query: 547 SADEINSLIKESESAIAAI---VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+ I + + + ++A P + + ++ P G++V + G +
Sbjct: 598 TTHNREQSISNARQCLKQLQLKIDAKAPQNAYEHPTEAVTNVKP--GDEVFIPKYGQR-G 654
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
V+E PG DD V VQ G +R+ + + +R + K A P R++G
Sbjct: 655 VVLEAPGQDDQVQVQVGMIRMTIARQELR---RAATKETARP----------RRTGVGQL 701
Query: 664 SNEEA-SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 720
++A PR LD+RGMRV+E +++ L AC ++ ++HG GTG ++
Sbjct: 702 VQQKARDISPR-------LDMRGMRVDEGLAEVEKYLDDACVAGLPLVQLVHGKGTGALR 754
Query: 721 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
V ++L+ H RV + ++ G TV +K
Sbjct: 755 SAVQKLLKEHHRVKTFRLGEQGEGGSGVTVVELK 788
>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81692142|sp|Q67QE3.1|MUTS2_SYMTH RecName: Full=MutS2 protein
gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 793
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 225/692 (32%), Positives = 341/692 (49%), Gaps = 84/692 (12%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
+R + R E LD+ ++ AA+ Q P++T R R V +K ++ +P GI +
Sbjct: 157 MRILQNRMKERLDAFVRGSAAKYLQ-----DPIVTIREGRFVVPVKIEYRAQVP-GIVHD 210
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
S+SG+T F+EP VE NN L+ E E IL+ L++ +A + + V +
Sbjct: 211 QSASGSTLFIEPMAIVEMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQAVAQ 270
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID A A+ + +D P L + + I +HPLL G
Sbjct: 271 IDFASAKGKLSLDLDCTEPELVREP------ILEIHKGRHPLLKGRV------------- 311
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
VPID+ + +VITGPNTGGKT ++KT+GL LM
Sbjct: 312 -----------------------VPIDVHIGITFDTLVITGPNTGGKTVALKTMGLFVLM 348
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++AGL+LPA + R+ F + DIGD QS+EQ+LSTFSGH++ I+ IL+ + +LVL+
Sbjct: 349 AQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPALVLL 408
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA SIL++L R V TTHY++L +R ENA+ EF +ET
Sbjct: 409 DELGAGTDPTEGAALAMSILEHLHKRGAKTVATTHYSELKTYAYTRSRVENASVEFDVET 468
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPT+R+L G G SNA I++ +G I+ RA++ + ++Q R +L Q +
Sbjct: 469 LRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQFL-----TQEQERVEDLIQGIHAT 523
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 534
R +LE + A L AE + E E D R+AA K Q QQ L A+ + +
Sbjct: 524 RAELEKERAEAHRLRAEAQRMREEYERRYGDAQRKAAETVEKARAQAQQILATARREAEA 583
Query: 535 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGE 591
V+ + + LR+ E I+ + S +A +A P ++ + P G+
Sbjct: 584 VIAELKQALREQREAERMQAIQSARSRLARARQAVEPTEEEQRARRRGEVPRGLKP--GD 641
Query: 592 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 651
+V V SL D V+ P D VLVQ G +++ V + L +
Sbjct: 642 KVRVVSL-DTTGYVLSEPDADGNVLVQAGILKMTVSLTD------------------LER 682
Query: 652 QQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--ACWES 704
E++ + AG ++G + SK +DLRG+ VEEA ++D L A
Sbjct: 683 ASEEQPAAGAGGPARMRTHGKGLAVSKAREMSPEVDLRGLMVEEALERVDKFLDDAVLAG 742
Query: 705 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +IHG GTG +++ V E LR+ RV Y
Sbjct: 743 LPQVRIIHGKGTGALRKAVTEALRHDRRVESY 774
>gi|118444471|ref|YP_877846.1| recombination and DNA strand exchange inhibitor protein
[Clostridium novyi NT]
gi|229486371|sp|A0PZP4.1|MUTS2_CLONN RecName: Full=MutS2 protein
gi|118134927|gb|ABK61971.1| DNA mismatch repair MutS2 family protein [Clostridium novyi NT]
Length = 785
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 245/751 (32%), Positives = 375/751 (49%), Gaps = 108/751 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + L LEE+I CI + I DRAS L IR R++++ S +K
Sbjct: 114 KYEVLESITEGLVPLNGLEEEISKCIIGEEEIS-DRASTTLFNIR----RSLKDKTSSIK 168
Query: 72 KVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + + + + + T R R + +K HK +P G+ + S+SGAT F+EP
Sbjct: 169 ARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSASGATLFIEPMSL 227
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN L E AE IL+ L+ ++ ++ IK D + E+D FA+A +AQ +
Sbjct: 228 VDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIKVDADILWELDFIFAKAKYAQKLG 287
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
+ PI+S H NI KHPL+ +P K VEN+ L
Sbjct: 288 AIMPIISEDGH------FNIINAKHPLI---------------DP-KKVVENNIY----L 321
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
GI+ VVITGPNTGGKT ++KT+GL +M+ +GL + A +
Sbjct: 322 RDGITS---------------VVITGPNTGGKTVTLKTVGLLHIMAMSGLMITASQGSTI 366
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG AL
Sbjct: 367 SFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSADENSLVLFDELGAGTDPTEGAAL 426
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL+ LR R + TTHY++L K ENA+ EF +ETLRPTYR+L G G S
Sbjct: 427 AVSILENLRKRKTKVIATTHYSELKAYALKVDNVENASVEFDVETLRPTYRLLIGVPGKS 486
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G II+ A++ + E L+ E +L QSL + K + AR A S
Sbjct: 487 NAFEISKRLGLPDYIIEDAREGISEETLKFE-------DLIQSLQHKNIKAQEHARKAES 539
Query: 488 LHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
E + L + E D+ +D+ +A KE +++ +E AK + D +++D R
Sbjct: 540 AKEEAVKLKEKYESKLDKFQDIREKAILNAQKEAKEIIKE---AKEEADKILKDIRELER 596
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-- 602
+ ++ L++E+ + D +E+ + + GE V S GD+L
Sbjct: 597 MGYSSDVRKLLEENRKKLK---------DKLEKTESKLNQ-PKEVGEAVTNVSEGDELYL 646
Query: 603 ------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
V+ P + V VQ G M+++V ++R +K + K+Q +
Sbjct: 647 PKFETKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQRKK 696
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
+ S +++ S+DLRGM EEA++ D L AC S + +IHG
Sbjct: 697 KQMSLN-----------LKSVATSVDLRGMDSEEATYTADKYLDDACMSGLSEVTIIHGK 745
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
GTGV++ + ++L+ HP V Y NYG
Sbjct: 746 GTGVLRTAINDMLKRHPHVKSYRL---GNYG 773
>gi|159902779|ref|YP_001550123.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9211]
gi|159887955|gb|ABX08169.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9211]
Length = 805
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 232/726 (31%), Positives = 374/726 (51%), Gaps = 95/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+ DRAS L +R R++++L + + + + G + +I +R R + +K
Sbjct: 158 VADRASNQLSQLR----RHLQDLRIGRRSILQDLIRRNGSILQDTVIAERYGRPVIAMKV 213
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+P G+ + SSSG T F+EP+ + N V + EE +LS+ + +AK+
Sbjct: 214 GSVDQVP-GVVHDSSSSGNTIFLEPQIVISLGNQIVEIQTKISKEEERLLSIWSQLVAKN 272
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ +L +L+++L ARA + W+ GV P+++++ D I+ HPLLL
Sbjct: 273 INSLNHLSSVLLQLELGLARARYGDWLGGVLPVITTKE----DDPFLIKDFSHPLLL--- 325
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
++ P+ DV SKG+ +VV ITGPNTGGK
Sbjct: 326 WKNKKLGGHKVIPITFDV----------SKGL---------------KVVAITGPNTGGK 360
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++K+ GLA LM++ G+ LP + P LPW + +LADIGD QSLEQNLSTFSGHI+RIV
Sbjct: 361 TIALKSFGLAVLMARCGMLLPCSSEPTLPWCNQVLADIGDEQSLEQNLSTFSGHIARIVR 420
Query: 342 ILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IL+++++ ++VL+DE+G+GTDP+EG A+A S+L+ L D L + TTH +L LK
Sbjct: 421 ILDVIAQSPGPTVVLLDEVGAGTDPTEGSAIAISLLRALADSARLTIATTHLGELKALKY 480
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
D+RFENA+ F ET+RPTY +LWG G SNA+ IA +G D +I + A+KL+ P+
Sbjct: 481 SDSRFENASVAFDSETIRPTYHLLWGIPGRSNAVAIAIRLGLDSQITETAKKLIG---PK 537
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
Q +++ L E+R + + A AA+L A LY E+ A + +ET
Sbjct: 538 GLQD-VNQVILGLEEQRERQQKAAEDAAALLARTELLYEEL---------LARWEQQQET 587
Query: 519 QQVQQELNFAKVQIDTV-----VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
+ QE+ K+ V++ +LR AD + +++ + I RP
Sbjct: 588 NRKWQEVGRYKLGTSIREGQREVRNLIRRLRAEGAD--GDIARKAGQRLKQIEFDSRP-- 643
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
VS N ++ P+ G++V + +LG K ++ + D + V G R V ++I
Sbjct: 644 --QVSRRNDFNWRPKIGDRVRLIALG-KSGEIISISEDGCHLTVLCGIFRSTVDLSSIES 700
Query: 634 I----PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
+ P+ + + PR + GS + V+T +N+LD+RG+RV
Sbjct: 701 LDGRKPSIPKSSVKVTTPR-----------TMGSFST-------VRTDRNTLDVRGLRVH 742
Query: 690 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYGC 746
EA ++ +L + ++VIHG+GTG +K + + L P RV EQ GC
Sbjct: 743 EAEAVVEESLR--NAIGKVWVIHGIGTGKLKRGLRQWLETLPYVERVVDAEQNDG-GSGC 799
Query: 747 TVAYIK 752
+V +++
Sbjct: 800 SVIWLR 805
>gi|253682073|ref|ZP_04862870.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
gi|253561785|gb|EES91237.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
Length = 785
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 239/748 (31%), Positives = 370/748 (49%), Gaps = 102/748 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y+ L + + L+ LEE+I CI + I DRAS L IR K ++ S +
Sbjct: 114 KYTVLESITEGIVPLSGLEEEIFKCIIGEEEI-SDRASTTLFNIRRSLKDKTSSIKSRVN 172
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ Q + + + T R R + +K HK +P G+ + SSSGAT F+EP V+
Sbjct: 173 SLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPMSLVD 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E E IL++L+ ++ + IK D + E+D FA+A +A +D +
Sbjct: 230 LNNEIKELRLKERDEIERILTVLSQKVYDNIDVIKVNADILWELDFIFAKAKYAAKLDAI 289
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
CP ++ H NI KHPL+ +P K VEN+ L
Sbjct: 290 CPTITEDGH------FNIIRAKHPLI---------------DP-KKVVENNIY----LRD 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
GI+ VITGPNTGGKT ++KT+GL +M+ +GL + A + +
Sbjct: 324 GITSL---------------VITGPNTGGKTVTLKTVGLMHIMAMSGLMITASQGSTISF 368
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG ALA
Sbjct: 369 FKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGAALAV 428
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G SNA
Sbjct: 429 SILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPGKSNA 488
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I+K +G II+ A+K + + + + +L QSL + K + AR A E
Sbjct: 489 FEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAQGAREE 543
Query: 492 IMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ L + E D+ KD+ +A KE +++ +E AK + D +++D R +
Sbjct: 544 AVKLKEKYESKLDKFKDIREKAILNAQKEAKEIIKE---AKEEADKILKDIRELERMGYS 600
Query: 549 DEINSLIKESE-----SAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLG 599
++ L++E+ + ++P D VSE + + P+F +V
Sbjct: 601 SDVRKLLEENRKKLKEKLEKTEEKLNKPKDVGEPIDKVSEGD-EVYLPKFDTKV------ 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
V+ P V VQ G M+++V ++R +K + K+Q ++
Sbjct: 654 ----MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQRKKREV 699
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S +++ +S+DLRGM +EA + D L AC S + +IHG GTG
Sbjct: 700 SLN-----------LKSVASSVDLRGMDSQEAVYTADKYLDDACMGGLSEVTIIHGKGTG 748
Query: 718 VVKERVLEILRNHPRVAKYEQESPMNYG 745
+++ + ++L+ HP V Y NYG
Sbjct: 749 ILRNAINDMLKRHPHVKSYRL---GNYG 773
>gi|168187371|ref|ZP_02622006.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
gi|169294704|gb|EDS76837.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
Length = 785
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 243/751 (32%), Positives = 371/751 (49%), Gaps = 108/751 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + L LEE+I CI + I DRAS L IR R++++ S +K
Sbjct: 114 KYEVLESITEGLVPLNGLEEEISKCIIGEEEIS-DRASSTLFNIR----RSLKDKTSSIK 168
Query: 72 KVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + + + + + T R R + +K HK +P G+ + SSSGAT F+EP
Sbjct: 169 ARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPMSL 227
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN L E AE IL+ L+ ++ ++ IK D + E+D FA+A +AQ +
Sbjct: 228 VDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIKVDADILWELDFIFAKAKYAQKLG 287
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
+ PI+S H NI KHPL+ +P K VEN+ L
Sbjct: 288 AIMPIISEDGH------FNIINAKHPLI---------------DP-KKVVENNIY----L 321
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
GI+ VVITGPNTGGKT ++KT+G+ +M+ +GL + A +
Sbjct: 322 RDGITS---------------VVITGPNTGGKTVTLKTVGVLHIMAMSGLMITASQGSTI 366
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+F + ADIGD QS+EQ+LSTFS H++ IV+I+E SLVL DE+G+GTDP+EG AL
Sbjct: 367 SFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIESADENSLVLFDELGAGTDPTEGAAL 426
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL+ LR R + TTHY++L K ENA+ EF +ETLRPTYR+L G G S
Sbjct: 427 AVSILENLRKRKTKVIATTHYSELKAYALKVDNVENASVEFDVETLRPTYRLLIGVPGKS 486
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G II+ A++ + E L+ E +L QSL + K + AR A
Sbjct: 487 NAFEISKRLGLPDYIIEDAREGISEETLKFE-------DLIQSLQHKNIKAQEHARKAEG 539
Query: 488 LHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
E + L + E D+ +D+ + KE +++ +E AK + D +++D R
Sbjct: 540 AREEAVKLKEKYESKLDKFQDIREKGILNAQKEAKEIIKE---AKEEADKILKDIRELER 596
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-- 602
+ ++ L++E+ + D +E + + GE V S GD+L
Sbjct: 597 MGYSSDVRRLLEENRKKLK---------DKLEKTEAKLNK-PKEVGEAVTNVSEGDELYL 646
Query: 603 ------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
V+ P + V VQ G M+++V ++R +K + K+Q +
Sbjct: 647 PKFDTKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQRKK 696
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
+ S +++ S+DLRGM EEA++ D L AC S + +IHG
Sbjct: 697 KQMSLN-----------LKSVATSVDLRGMDSEEATYTADKYLDDACMGGLSEVTIIHGK 745
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
GTGV++ + ++L+ H V Y NYG
Sbjct: 746 GTGVLRTAINDMLKRHHHVKSYRL---GNYG 773
>gi|452823864|gb|EME30871.1| DNA mismatch repair protein MutS2 [Galdieria sulphuraria]
Length = 902
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 229/719 (31%), Positives = 366/719 (50%), Gaps = 89/719 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L +++N + +LE+ I +D K I D AS L R + + ++ +L
Sbjct: 218 YPLLYRIVENVVSMKDLEDSICRSVDEKEQI-RDNASIRLYETRTQIRSTFVHIRKVLHS 276
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ Q + +P+ T+R R + +KA+ + +P GI ++SSSG+T ++EP
Sbjct: 277 LLQQ--HEESLQEPIYTERFGRYVIPVKATRRNRVP-GIIQDISSSGSTLYIEPNSIRSL 333
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
N +L + E IL L+ ++ ++ + Y+ + ++D ARA F+Q ++G
Sbjct: 334 TNRMQQLRHIEEEAIEEILFDLSRKVCENADHLLYISHAIFQLDWILARAQFSQQINGRF 393
Query: 193 P-ILSSQSHVSFDSSIN---IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
P I+ S S+ + ++ + G++HPLL +S+
Sbjct: 394 PTIVESFSNAALSCKVDAWKLRGVRHPLLERNSI-------------------------- 427
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA-KNHP 307
VPID +V V ITGPNTGGKT ++KT G+ LM+K GL++P +N
Sbjct: 428 ---------VPIDFEVRPGVTAVCITGPNTGGKTVALKTFGIVILMTKVGLFVPCEQNDV 478
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+P+F+ I AD+GDHQS+ Q+LSTFS HI RI I++L + SLVL+DEIG+GTDP EG
Sbjct: 479 HIPFFEDIFADVGDHQSVTQSLSTFSSHILRIQRIVQLSHKRSLVLLDEIGTGTDPVEGC 538
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA S+L YL +RVG + TTH+ +L LK KD RFENA+ E +LRPTYR++WG G
Sbjct: 539 ALAMSLLLYLVERVGFLMATTHHGELKTLKYKDARFENASVELDTFSLRPTYRLIWGVAG 598
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVER------LRPERQQHRKSELYQSLMEERRKLESQ 481
S+A+ IA+ +G D I Q A+ +VE L E + K Q ++E + ++E +
Sbjct: 599 RSSAIAIAQRLGLDNWITQSARSIVENGVDKLSLAIEDIERTK----QQVIEMKEQIERK 654
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
R L ++M E E+ + L+ K Q ++Q+ A+ QI V+++ +
Sbjct: 655 ERELECLERQLM----EREERIQQLENEWIETKK---QALEQDFANAREQIAKVIKEVQR 707
Query: 542 QLRDAS-----ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
DAS E+ SL+ E +SA +H SVS T G+ V VK
Sbjct: 708 CGSDASLIMERKQELESLMLEQKSA------SHHD----SVSGTKVRK-----GDWVLVK 752
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
L + VVE + +V++G +RV+V + + + N + +K+ +
Sbjct: 753 RLSSEPLQVVEGMNNKGDFMVRFGSIRVKVSIMEAEVVNDPTIQKVENRSKLSKKRSTNS 812
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 715
S+ SS+ A + N++D+RG RVEEA+ +++ L + F+IHG G
Sbjct: 813 TLVSSTSSSIRAKW--------NTIDVRGCRVEEAAAKIENELGRNAECNQYFIIHGFG 863
>gi|331269166|ref|YP_004395658.1| MutS2 family protein [Clostridium botulinum BKT015925]
gi|329125716|gb|AEB75661.1| MutS2 family protein [Clostridium botulinum BKT015925]
Length = 785
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 238/750 (31%), Positives = 370/750 (49%), Gaps = 106/750 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y+ L + + L+ LEE+I CI + + DRAS L IR K ++ S +
Sbjct: 114 KYTVLESITEGIVPLSGLEEEIFKCIIGEDEL-SDRASTTLFNIRRSLKDKTSSIKSRVN 172
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ Q + + + T R R + +K HK +P G+ + SSSGAT F+EP V+
Sbjct: 173 SLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPMSLVD 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E E IL++L+ ++ + IK D + E+D FA+A +A +D +
Sbjct: 230 LNNEIKELRLKERDEIERILTVLSGKVYDNIDVIKVNADILWELDFIFAKAKYAAKLDAI 289
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
CP +S H NI KHPL+ K VEN+ L +
Sbjct: 290 CPTISEDGH------FNIIRAKHPLI----------------DTKKVVENNIY----LRE 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
GI+ +VITGPNTGGKT ++KT+GL +M+ +GL + A + +
Sbjct: 324 GITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITAAQGSTISF 368
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG ALA
Sbjct: 369 FKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGAALAV 428
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G SNA
Sbjct: 429 SILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPGKSNA 488
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I+K +G II+ A+K + + + + +L QSL + K + AR A E
Sbjct: 489 FEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAEGAREE 543
Query: 492 IMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ L + E D+ KD+ +A KE +++ +E AK + D +++D R +
Sbjct: 544 AVKLKEKYENKLDKFKDIREKAILNAQKEAKEIIKE---AKEESDKILKDIRELERMGYS 600
Query: 549 DEINSLIKESESAIAAIV-----------EAHRPDDDFSVSETNTSSFTPQFGEQVHVKS 597
++ L++E+ + + E P D V+E + + P+F +V
Sbjct: 601 SDVRKLLEENRKKLKEKLEKTEEKLNKPKEIGEPID--KVAEGD-EVYLPKFDTKV---- 653
Query: 598 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 657
V+ P V VQ G M+++V ++R +K + K+Q ++
Sbjct: 654 ------MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQRKKR 697
Query: 658 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 715
S +++ +S+DLRGM +EA + D L AC S + +IHG G
Sbjct: 698 EVSLN-----------LKSVASSVDLRGMDSQEAVYTADKYLDDACMGGLSEVTIIHGKG 746
Query: 716 TGVVKERVLEILRNHPRVAKYEQESPMNYG 745
TG+++ + ++L+ HP V Y NYG
Sbjct: 747 TGILRNSINDMLKRHPHVKSYRL---GNYG 773
>gi|384135955|ref|YP_005518669.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290040|gb|AEJ44150.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 779
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 230/720 (31%), Positives = 367/720 (50%), Gaps = 100/720 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
++D AS L +R E++R + + L ++ QA + +P+I R C+ ++ H
Sbjct: 148 VVDHASPTLLRLRDEKRRREAEIRAALDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEH 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P GI +VSSSG+T F+EP+ VE + L E E +L L A +A+
Sbjct: 206 KSQIP-GIVRDVSSSGSTVFIEPRTIVELSERVRELEVLEEREVERLLYQLAAAVAQVAD 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ +D E+D FA+A +A+ +DG P L+ + + G +HP L +
Sbjct: 265 DFLRTLDVAAEVDFVFAKAAYARRVDGKRPRLT-------EGVWRLYGARHPKLHRDA-- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPID+++ R+++ITGPNTGGKT
Sbjct: 316 ----------------------------------VPIDVELGDRFRLLIITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+L
Sbjct: 342 TLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDML 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++
Sbjct: 402 ERVTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAA 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V E H
Sbjct: 462 ENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV----AESNIH- 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKAK 516
+ L+ KLE+ +R A + E RE D+A DL R+ A ++ +
Sbjct: 517 ----VEDLIG---KLEAASREAERMRDEAERALREARDQAADLARQKAAWEASKDSMREQ 569
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P + +
Sbjct: 570 AAREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKRT 623
Query: 577 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
+ + + G++V V SLG K VVEV D +VQ G MR++V +++ + +
Sbjct: 624 PARRRMRAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDASDLEVVGD 681
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
++ AA RL G A + + LD+RG V++A ++D
Sbjct: 682 AQ-PAAAPSVTRL---------GGA-------------KDVRMELDVRGESVDDAISRID 718
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYIK 752
L A S + +IHG GTG ++ + LR+HP V E P G TV +++
Sbjct: 719 KYLDDAVVAGISRVVIIHGKGTGALRTAIRRYLRDHPHVKSSEPAGPGEGGDGATVVHVR 778
>gi|258512089|ref|YP_003185523.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478815|gb|ACV59134.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 776
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 228/721 (31%), Positives = 369/721 (51%), Gaps = 102/721 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
++D AS L +R E++R + ++L ++ QA + +P+I R C+ ++ H
Sbjct: 145 VIDHASPTLLRLRDEKRRREAEIRTVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEH 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+
Sbjct: 203 KSQIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYQLAAAVAQVAD 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++ E+D FA+A +A+ +DG P L+ D + G +HP L +
Sbjct: 262 DFLRNLNVAAEMDFVFAKAAYARRVDGKRPRLT-------DGVWRLHGARHPKLHRDA-- 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPID+++ R+++ITGPNTGGKT
Sbjct: 313 ----------------------------------VPIDVELGDRFRLLIITGPNTGGKTV 338
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+L
Sbjct: 339 TLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDML 398
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++
Sbjct: 399 ERVTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAA 458
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V
Sbjct: 459 ENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA---------- 508
Query: 464 KSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKA 515
+S+++ + L+ KLE+ +R A + E RE D+A DL R+ A ++
Sbjct: 509 ESDIHVEDLIG---KLEAASREAERMRDEAEQALREARDQAADLARQKAAWEASKDSMRE 565
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
+ ++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P +
Sbjct: 566 QAAREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKR 619
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + + G++V V SLG K VVEV D +VQ G MR++V ++ +
Sbjct: 620 AAPRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVG 677
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+++ AA RL G A + + LD+RG V++A ++
Sbjct: 678 DAQ-PAAAPSVTRL---------GGA-------------KDVRMELDVRGETVDDAISRI 714
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYI 751
D L A S + +IHG GTG ++ + LR+HP V E P G TV ++
Sbjct: 715 DKYLDDAVVAGISRVVIIHGKGTGALRNAIRRYLRDHPHVKSSEPAGPGEGGDGATVVHV 774
Query: 752 K 752
+
Sbjct: 775 R 775
>gi|427702746|ref|YP_007045968.1| MutS2 family protein [Cyanobium gracile PCC 6307]
gi|427345914|gb|AFY28627.1| MutS2 family protein [Cyanobium gracile PCC 6307]
Length = 820
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 235/764 (30%), Positives = 374/764 (48%), Gaps = 100/764 (13%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 74
L+ L ELE+++ FC++ + + DRAS LE +R A R + L L+++
Sbjct: 127 LVAELRTLPELEQRLHFCLE-EGGRVADRASGPLEAVRRQLLALRAERRDRLQELVRRYG 185
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ + ++++R R + +KA + G+ + S+SG+T ++EP+ + N
Sbjct: 186 SLL------QDTVVSERGGRPVLAVKAGAAAQV-GGLVHDSSASGSTVYVEPQAVIPLGN 238
Query: 135 MEVRLSNSEIAE---ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
R+ ++E E E + S L+A + + + +L ++ ID ARA + QW+ V
Sbjct: 239 ---RIRDAEGQERELERQVRSELSALVGEQAEPLDHLQQVLVRIDAGLARARYGQWLGAV 295
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P L+ S D+ + ++HPLLL R P+
Sbjct: 296 RPELAD----SADAPFELCDLRHPLLLWQERRE------GGRPV---------------- 329
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+ I+V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 330 ------VPVTIRVGPELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCAGTPRLPW 383
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV--------------SRESLVLIDEI 357
+LADIGD QSL+QNLSTFSGHI RI IL + SLVL+DE+
Sbjct: 384 CGQVLADIGDEQSLQQNLSTFSGHIRRIARILAALPAGAGFPEGAALPQGPASLVLLDEV 443
Query: 358 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 417
G+GTDP+EG ALA ++L++L DR L V TTH+ +L LK D RFENA+ F +ETL P
Sbjct: 444 GAGTDPTEGSALAAALLRHLADRARLTVATTHFGELKALKYADPRFENASVAFDVETLSP 503
Query: 418 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP------ERQQHRKSELYQSL 471
TYR+ WG G SNAL IA +G D ++ A +E P R + Q
Sbjct: 504 TYRLQWGIPGRSNALAIASRLGLDPAVLAVAAAQLE---PGGEGDVNRVIEGLEQERQRQ 560
Query: 472 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 531
E + LH E++ + + ++++ +L + ++ Q E+ +
Sbjct: 561 QEAAEAAAALLARTELLHEELLQRWSQQKEQSAELQEQRRQRLELSIREGQGEVRRLIRR 620
Query: 532 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 591
+ +V Q+ R A +++ + + + HRP + + + P+ G+
Sbjct: 621 LRSVGQEVRVGGRVA-----GETARQAGQRLRRLEQQHRPLPE----RRDHGGWRPRVGD 671
Query: 592 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP-RLR 650
++ + +LG K A V+ + D + V+ G +R+ V+ I + K P R+R
Sbjct: 672 RIRLLALG-KAAEVLAISDDGSELSVRCGVLRLTVELAGIEGLHGEKPAPPEPPPQVRIR 730
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFV 710
S S GP V+T N++D+RG+RV EA ++ L + ++V
Sbjct: 731 ------------SRRSPGSRGPEVRTEGNTVDVRGLRVHEAEAAVEERLRG--ANGPVWV 776
Query: 711 IHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
IHG+GTG +K + E L P V + + GC+V ++K
Sbjct: 777 IHGIGTGKLKRGLREWLSGLPWVERVSDADQGDGGPGCSVIWVK 820
>gi|163814590|ref|ZP_02205979.1| hypothetical protein COPEUT_00741 [Coprococcus eutactus ATCC 27759]
gi|158450225|gb|EDP27220.1| MutS2 family protein [Coprococcus eutactus ATCC 27759]
Length = 821
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 225/707 (31%), Positives = 344/707 (48%), Gaps = 96/707 (13%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
KY D + E+D FARA FA+ G PI ++ D ++I +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIRQGRHPLL-------- 342
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V+ SLVL DE+G GTDP EG ALA +IL +L D + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNDMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+ ++ + +
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDESIIESAKANIDSDTVDFET---- 551
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
L L +R++E A L + L + + +L + A + AK Q+ + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610
Query: 526 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 571
AK + D ++ + + A AD +IN L K +E + H+
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
DF V G+ VHV S+ D T+ + + VQ G + + ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTITALADSKGKLKVQMGIISASLPPTDL 716
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
+ + K+K P+ + + + G S R+ K +++ GM V+EA
Sbjct: 717 LLVEHEKKK------PQ-------KATVTGGKSM------ARMMNIKPEINVLGMTVDEA 757
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +D L A + +IHG GTG +++ + + L++ P V +
Sbjct: 758 TSLVDRFLDDALMAHLHRVTIIHGKGTGALRKGIHQFLKSQPHVKSF 804
>gi|423072092|ref|ZP_17060854.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
gi|361857227|gb|EHL09076.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
Length = 789
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 227/742 (30%), Positives = 360/742 (48%), Gaps = 101/742 (13%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGG 82
+EE+I CI D + + D+AS L +R + R E LD +++ A Q
Sbjct: 131 IEEEITRCITEDGQ---VADQASSVLADLRRSISRLQTRIRETLDGIIRNPAYQKI---- 183
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ P++T+R R V +K ++ GI + S+SGAT ++EP V N +
Sbjct: 184 LQDPIVTQRSERYVVPVKQEYRQSF-QGIVHDQSASGATLYIEPMAVVNLGNELREVVLK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL LL+A + I + + +D A+A ++ M+ PIL+ + +S
Sbjct: 243 EQREVQRILLLLSARVEGEAEAIADAHEALARVDFILAKARLSEEMNAGAPILTEKQEIS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPLL G VP+ I
Sbjct: 303 LVQA------RHPLLTGKV------------------------------------VPLTI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ VV+TGPNTGGKT ++KT+GL + M++ GL++PA++ R+ F I ADIGD
Sbjct: 321 QLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I+E SL+L+DE+G+GTDP+EG ALA +I+ L +R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIVEKADWRSLILLDEVGAGTDPTEGSALAMAIIAELHERGA 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L TR ENA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 441 RIVATTHYGALKNFAYNTTRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++ RA+ V ER+ ++L ++L + +R+++ + R A I ++++
Sbjct: 501 GVLDRARTFV----TEREMQ-VADLIENLEDTQREIDLEKRRAREERQAIEKESLGLKEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ L+ L AK Q + + A+ + + ++ + + L++ D+ I+++ I
Sbjct: 556 SQKLEDDYQELMAKARDQATEIVREARREAERLIDELKLALKEERKDQ--QAIEKTRQGI 613
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTP--------QFGEQVHVKSLGDKLATVVEVPGDDDT 614
+ V + +T TP + G+ V++ L K V+++P D
Sbjct: 614 RKL--------SNKVGDQDTPLRTPHGVEPQEIKLGQMVYMTKLRQK-GQVLKLPNDSGE 664
Query: 615 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 674
V VQ G +++ V + IR I K AA P R G G + +
Sbjct: 665 VFVQAGVIKLNVPLSEIRLIQEEK---AAKPT---------RSVGGQGKVGMK-----KA 707
Query: 675 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
+T + +DLRGM VEEA ++LD L A ++VIHG GTG +++ + E LR H
Sbjct: 708 ETIRTEIDLRGMMVEEAGYELDKYLDDAVLTGVGQVYVIHGKGTGALRQGIHEFLRGHHH 767
Query: 733 VAKYE--QESPMNYGCTVAYIK 752
V + Q + G TV +K
Sbjct: 768 VKSFRLGQHGEGDLGVTVVELK 789
>gi|89893029|ref|YP_516516.1| hypothetical protein DSY0283 [Desulfitobacterium hafniense Y51]
gi|219666299|ref|YP_002456734.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
gi|89332477|dbj|BAE82072.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536559|gb|ACL18298.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
Length = 789
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 227/742 (30%), Positives = 360/742 (48%), Gaps = 101/742 (13%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGG 82
+EE+I CI D + + D+AS L +R + R E LD +++ A Q
Sbjct: 131 IEEEITRCITEDGQ---VADQASSVLADLRRSISRLQTRIRETLDGIIRNPAYQKI---- 183
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ P++T+R R V +K ++ GI + S+SGAT ++EP V N +
Sbjct: 184 LQDPIVTQRSERYVVPVKQEYRQSF-QGIVHDQSASGATLYIEPMAVVNLGNELREVVLK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL LL+A + I + + +D A+A ++ M+ PIL+ + +S
Sbjct: 243 EQREVQRILLLLSARVEGEAEAIADAHEALARVDFILAKARLSEEMNAGAPILTEKQEIS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPLL G VP+ I
Sbjct: 303 LVQA------RHPLLTGKV------------------------------------VPLTI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ VV+TGPNTGGKT ++KT+GL + M++ GL++PA++ R+ F I ADIGD
Sbjct: 321 QLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I+E SL+L+DE+G+GTDP+EG ALA +I+ L +R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIVEKADWRSLILLDEVGAGTDPTEGSALAMAIIAELHERGA 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L TR ENA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 441 RIVATTHYGALKNFAYNTTRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++ RA+ V ER+ ++L ++L + +R+++ + R A I ++++
Sbjct: 501 GVLDRARTFV----TEREMQ-VADLIENLEDTQREIDLEKRRAREERQAIEKESLGLKEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ L+ L AK Q + + A+ + + ++ + + L++ D+ I+++ I
Sbjct: 556 SQKLEDDYQELMAKARDQATEIVREARREAERLIDELKLALKEERKDQ--QAIEKTRQGI 613
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTP--------QFGEQVHVKSLGDKLATVVEVPGDDDT 614
+ V + +T TP + G+ V++ L K V+++P D
Sbjct: 614 RKL--------SNKVGDQDTPLRTPHGVEPQEIKLGQMVYMTKLRQK-GQVLKLPNDSGE 664
Query: 615 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 674
V VQ G +++ V + IR I K AA P R G G + +
Sbjct: 665 VFVQAGVIKLNVPLSEIRLIQEEK---AAKPT---------RSVGGQGKVGMK-----KA 707
Query: 675 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
+T + +DLRGM VEEA ++LD L A ++VIHG GTG +++ + E LR H
Sbjct: 708 ETIRTEIDLRGMMVEEAGYELDKYLDDAVLTGVGQVYVIHGKGTGALRQGIHEFLRGHHH 767
Query: 733 VAKYE--QESPMNYGCTVAYIK 752
V + Q + G TV +K
Sbjct: 768 VKSFRLGQHGEGDLGVTVVELK 789
>gi|338814182|ref|ZP_08626216.1| MutS2 family protein [Acetonema longum DSM 6540]
gi|337273787|gb|EGO62390.1| MutS2 family protein [Acetonema longum DSM 6540]
Length = 786
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 230/705 (32%), Positives = 344/705 (48%), Gaps = 88/705 (12%)
Query: 44 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS +L +R E R+R E +DS+L Q + L+T R R C+ +
Sbjct: 143 IRDDASPELSRLRREIRTTRQRIREKVDSILHSSEYQKY----FQDVLVTVRGDRYCIPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K H++ P GI + S+SGAT F+EP V+ NN + +E E IL+LL+ ++A
Sbjct: 199 KQEHRHQFP-GIIHDQSASGATVFIEPMAVVQLNNDLKQAMAAEKNEIERILTLLSLQVA 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
KS + + + ID AFA+A A + P+ + V + +HPL+
Sbjct: 258 KSASLLTQSCETMAHIDFAFAKARLALDLKAHEPLFNQTGQVELRQA------RHPLI-- 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
P S+ VPID+++ + ++VITGPNTG
Sbjct: 310 --------------P-------------------SEDVVPIDVRIGNDFHILVITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+G+ +LM++AGL++PA N +L F I ADIGD QS+EQ+LSTFS H++ +
Sbjct: 337 GKTVALKTVGIFALMAQAGLFIPAANECQLTVFHNIFADIGDEQSIEQSLSTFSAHMTNL 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V IL V+ + LVL+DEIG GTDP EG ALA +IL+YL + TTHY++L
Sbjct: 397 VRILNQVTGKDLVLLDEIGIGTDPDEGAALAMAILEYLHSIGARTIATTHYSELKTFAYS 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ ENA EF +TLRPTYR+L G G SNA I+K +G KII RA++L+++
Sbjct: 457 RSGIENACVEFDQQTLRPTYRLLIGVPGSSNAFQISKRLGLPVKIIDRARQLLDK----- 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHA---EIMDLYREIEDEAKDLDRRAAHLKAK 516
H + E S +EE + S R A++ +I +L +++E E + L + A K
Sbjct: 512 -GHVEMESVLSSLEEEKT--SYIRRNAAIEQQERQITELRKKLELEQETLTEKKAETINK 568
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDF 575
+ L A+ + V+++ + Q + E I + + + +AH +D
Sbjct: 569 AKNEAAGILRQARRDAEEVIKELKEQFQVKDGQERQYAIHAARKRLRDNLSQAHHLEDQR 628
Query: 576 -SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
S+ + P G +V V +L TV+ V D VQ G M+V V + R
Sbjct: 629 ESLPTVSAEDLRP--GMKVWVVTLRQN-GTVISV--DSGEATVQLGIMKVNVALKDCRLA 683
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+ PR R Q + + + QT +D+RG+ VEEA Q
Sbjct: 684 EGADE-------PRERAPQSKKTVDTL-----------KTQTVSRQIDIRGITVEEAELQ 725
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
LD L A S VIHG GTG +++ V L+ H V E
Sbjct: 726 LDKYLDDAVLSGLSEALVIHGKGTGALRKGVRSYLKQHRHVRSIE 770
>gi|357011634|ref|ZP_09076633.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus elgii B69]
Length = 795
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 229/746 (30%), Positives = 374/746 (50%), Gaps = 84/746 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLK 71
LL+LL+ ELEE+I C+D + +D AS +L IR E + + E L+ +++
Sbjct: 125 LLDLLEPMTDHKELEERIRGCVDENAQV-MDTASTELLKIRQELRSSESKARERLEQMVR 183
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+
Sbjct: 184 TPSIQKM----LQDNLVTIRGDRYVIPVKQEYRGHF-GGMIHDQSASGATLFIEPEAVVQ 238
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E AE IL +L+A +A S + ++ + E+D FA+AG A+ M
Sbjct: 239 MNNRVRELKLKEEAEVEKILRMLSALVADSADTLLVNVESLTELDFIFAKAGVAREMKAT 298
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P+L+ + + +HPL+ +
Sbjct: 299 LPLLNDRGFIKLKRG------RHPLIPAEKV----------------------------- 323
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+D+++ +++TGPNTGGKT S+KT+GL SLM+ AGL++PA+ +L
Sbjct: 324 ------VPLDVELGNRYSTIIVTGPNTGGKTVSLKTIGLLSLMAMAGLFVPAEEGSQLCV 377
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA
Sbjct: 378 FDAIFADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAI 437
Query: 372 SILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL+++ R+G +V TTHY++L NA+ EF ++TLRPTYR+L G G SN
Sbjct: 438 SILEHMH-RMGCRIVATTHYSELKAYAFDRQGVINASMEFDVQTLRPTYRLLVGVPGRSN 496
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G + II A+ V + R + +L E R + E++ +A
Sbjct: 497 AFAIAERLGLAKTIIDHARGQV-----GEEDQRVESMIATLEENRLQAEAERESAERNRR 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E+ L ++ E + + + L + ++ Q+ + A+ + D ++ + R+ +
Sbjct: 552 EVETLREQLAAERRRFEEQKDKLFERAEREAQEAVAKARREADEIITELRRIQREEAGGV 611
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
+ + E + + R P G++V V +LG + VVE+
Sbjct: 612 KDHKLSELKRRMNDAAPELRSKSKAGTPRKKADRIGP--GDEVLVTNLGQR-GHVVELVS 668
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
+ + V VQ G ++++V K ++ + ++ +A P QQ+ A SS +
Sbjct: 669 ETE-VTVQLGILKMKVNKADLELL----KQASAQKKP----QQQ------ATSSLKRT-- 711
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
R + +K LDLRG VEEA ++D L + + +F+IHG GTGV++ + E LR
Sbjct: 712 --RDENAKMELDLRGANVEEAIIEVDRFLDESYLANFGQVFIIHGKGTGVLRTGIQEFLR 769
Query: 729 NHPRVAKYEQES--PMNYGCTVAYIK 752
H V + + G TVA +K
Sbjct: 770 KHKHVKSFRMGAYNEGGAGVTVAELK 795
>gi|218288876|ref|ZP_03493127.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240965|gb|EED08142.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
Length = 776
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 229/721 (31%), Positives = 367/721 (50%), Gaps = 102/721 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
++D AS L +R E++R + S+L ++ QA + +P+I R C+ ++ H
Sbjct: 145 VIDHASPTLLRLRDEKRRREGEIRSVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEH 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+
Sbjct: 203 KSQIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYELAAAVAQVAD 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++ E+D FA+A +A+ +DG P L+ D + G +HP
Sbjct: 262 DFLRNLNVAAEMDFVFAKATYARRVDGKRPRLT-------DGVWRLHGARHP-------- 306
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
L D VPID+++ R+++ITGPNTGGKT
Sbjct: 307 ----------KLDRDA------------------VPIDVELGERFRLLIITGPNTGGKTV 338
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+L
Sbjct: 339 TLKTIGLLTLMGMSGLFLPTKRESEIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDML 398
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++
Sbjct: 399 ERVTEDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAA 458
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V
Sbjct: 459 ENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA---------- 508
Query: 464 KSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKA 515
+S+++ + L+ KLE+ +R A + E RE D+ DL R+ A ++
Sbjct: 509 ESDIHVEDLIG---KLEAASREAELMRDEAERALREARDKEADLARQKAAWEASKDSMRE 565
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
+ ++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P +
Sbjct: 566 QAAREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKR 619
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + + G++V V SLG K VVEV D +VQ G MR++V ++ +
Sbjct: 620 AAPRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVG 677
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+++ AA RL G A + + LD+RG V++A ++
Sbjct: 678 DAQ-PAAAPSVTRL---------GGA-------------KDVRMELDVRGETVDDAISRI 714
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 751
D L A S + +IHG GTG ++ + LR HP V E P G TV ++
Sbjct: 715 DKYLDDAVVAGISRVVIIHGKGTGALRNAIRRYLREHPHVKSSEPAGPGEGGDGATVVHV 774
Query: 752 K 752
+
Sbjct: 775 R 775
>gi|302389949|ref|YP_003825770.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
gi|302200577|gb|ADL08147.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
Length = 790
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 224/747 (29%), Positives = 364/747 (48%), Gaps = 106/747 (14%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVA 74
+++ + + LE+KI I + I D AS L IR E++ R E L+ +
Sbjct: 120 IIEEIHIFSSLEDKIHKAIISENEIA-DGASPRLSAIRKEKRILFQRAKEKLELYISSPQ 178
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
Q F + +P+IT R SR + +K + +P G+ + S+SGAT ++EP ++ NN
Sbjct: 179 YQKF----LQEPIITIRNSRYVIPVKQEFRSSIP-GVIHDQSASGATLYLEPMPVLQINN 233
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
RL E E IL + +IA++ ++ + ++ +D A+A ++ + GV P
Sbjct: 234 ELRRLEIEEQKEMEQILREFSEKIAENREYLEVTFEGLVRLDFILAKAKYSMDIKGVEPG 293
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L+S+ + INI +HPLL G
Sbjct: 294 LNSRGY------INIRKGRHPLLRGEV--------------------------------- 314
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPIDI + E V+VITGPNTGGKT S+KT+GL +LM++AGL+LPA+ L F+
Sbjct: 315 ---VPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALMAQAGLHLPAEEGTELSVFNE 371
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 374
+ ADIGD QS+EQ+LSTFS H+ I DI++ SLVL+DE+G+GTDP+EG ALA +IL
Sbjct: 372 VFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLLDELGAGTDPTEGAALAMAIL 431
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
Y ++ V TTHY++L R ENA+ EF +ETL PTYR+ G G SNA I
Sbjct: 432 DYFCEKGTRVVATTHYSELKAFAYSMERMENASVEFDVETLSPTYRLTIGIPGKSNAFEI 491
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
AK +G R+II+ A+ + R+ + +L + L +ER + + + L + M
Sbjct: 492 AKRLGLKREIIELARSFL-----NRENIQLEDLLKGLEQERERAKREKEEIQELKKQYMM 546
Query: 495 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-------QLRDAS 547
+E+EDE + L R + AK ++ + + + + +++ + Q+RD
Sbjct: 547 RLKELEDEKEKLRNREEKILAKAREKARSIIEKVNKEAEKILERLKEVEAQDTRQVRDRI 606
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-------GEQVHVKSLGD 600
+E+ +K++ DD+S E + G++V V+SL
Sbjct: 607 IEEVRRRLKKA-------------SDDYSPKEPLIKKAGAKVVAGPINPGDKVRVESLNQ 653
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ +V V + T VQ G M+V + P L K QE+
Sbjct: 654 E-GYIVSVDEREKTAQVQIGIMKVNL------------------PLSSLVKIQEEEDKAD 694
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+G+ + + + +DLRG+ ++EA ++D L A + +IHG GTG+
Sbjct: 695 SGNVKYSSLAMEKTREISREIDLRGLTLDEALLKVDKYLDDASLAGLPSVVIIHGKGTGI 754
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYG 745
+++ + ++L+ + + + MN G
Sbjct: 755 LRKGIQDMLKTRKDIKSF-RPGNMNEG 780
>gi|295094560|emb|CBK83651.1| MutS2 family protein [Coprococcus sp. ART55/1]
Length = 821
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 224/707 (31%), Positives = 346/707 (48%), Gaps = 96/707 (13%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
KY D + E+D FARA FA+ G PI ++ D ++I+ +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIKQGRHPLL-------- 342
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V+ SLVL DE+G GTDP EG ALA +IL +L + + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNNMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+ ++ + +
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDDSIIESAKANIDSDTVDFET---- 551
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
L L +R++E A L + L + + +L + A + AK Q+ + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610
Query: 526 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 571
AK + D ++ + + A AD +IN L K +E + H+
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
DF V G+ VHV S+ D T++ + + VQ G + + ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTIMALADSKGKLKVQMGIISAALPPTDL 716
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
+ + K+K P+ + + + G S R+ K +++ GM V+EA
Sbjct: 717 LLVEHEKKK------PQ-------KATVTGGKSMN------RMMNIKPEINVLGMTVDEA 757
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +D L A + +IHG GTG +++ + + L++ P V +
Sbjct: 758 TSLVDRFLDDALMAHLHRVTIIHGKGTGALRKGIHQFLKSQPHVKSF 804
>gi|449017364|dbj|BAM80766.1| DNA mismatch repair protein MutS, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 1029
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 232/759 (30%), Positives = 367/759 (48%), Gaps = 121/759 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS++L ++R + +R E + L++ I Q+ G + T R R + +KA+HK
Sbjct: 338 ASDELRVVRTQLQRIKERIKDELQR----IIQSKGDALQDRTPTTRYDRQVLAVKATHKR 393
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+P GI + S++G+T F+EP VE N+ RLS E A E I + L+ + + +
Sbjct: 394 RIP-GIVHDYSNTGSTVFVEPHAIVELNSELRRLSRRESAIERDIWNQLSKRLHAASVRL 452
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +++ID + ARA +A+ + ++ S + D I G HPLLL SL+S+
Sbjct: 453 SSTFEALIDIDFSVARARYARHIGASLVRFAADSEMPVD----IRGACHPLLLWRSLKSM 508
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+ VPID + ++TG N GGKT +
Sbjct: 509 ESV-----------------------------VPIDFHLRGIASAAILTGANAGGKTLAA 539
Query: 286 KTLGLASLMSKAGLYLPAKN-HPRL------------PWFDLILADIGDHQSLEQNLSTF 332
KTLGL LM+K+G+ +P ++ P + P+FD +LADIGD QSLEQNLSTF
Sbjct: 540 KTLGLIVLMAKSGIPIPRRHADPNMSPTTLLDEDVTVPYFDRVLADIGDEQSLEQNLSTF 599
Query: 333 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR--VGLAVVTTHY 390
SGHI RI +IL+ + +SLVL+DE+G+GTDP+EG AL ++++YL ++ V VTTH+
Sbjct: 600 SGHIRRIGEILQCATADSLVLLDELGAGTDPAEGAALGIALVRYLVEKKNVRFVFVTTHH 659
Query: 391 ADLSCLKDKD-TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 449
++L L + +R+EN + EF + L PTYR+LWG G S AL +A+ +G D I+Q A+
Sbjct: 660 SELKTLFFMEPSRYENVSVEFDTDRLEPTYRLLWGVAGRSYALLVARRLGLDHDILQEAE 719
Query: 450 KLVER-----------LRPERQQHRKSELYQSLMEERRKLE-------SQARTAASLHAE 491
L+ER + LME+ K+ +AR A
Sbjct: 720 NLLERSVGVGSSPDSLPLSPGSGSSSPQNMSRLMEQVEKIRVEQLQNLERARQEA----- 774
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-----DA 546
RE+E ++ ++R A L+ + +++ + +++ V Q+ L+ +
Sbjct: 775 -----REMERMRQEHEKRLAGLERHRKEAIEEVKRALEAELEQVRQELREALQRLRRNEM 829
Query: 547 SADEINSLIKESESAIA----AIVEAHRPDD---DFSVSETNTSSFTPQFGEQVHVKSLG 599
++ E N+L E+ +A A+ R DD + +TN P+ G
Sbjct: 830 ASSEGNTLANTLEAKVAEATMALAGLERDDDREINPETVDTNDYVMVPKLG--------S 881
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQED 655
L ++P D + V G + + + RP S A +PR R + E
Sbjct: 882 SPLRVTQKLP--DGRIRVALGNLTATIAVQEVVSVQRPTEAST-TMATERSPRRRVEAEK 938
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 715
SG S V+T +N++DLRGMR E LD A+ L++IHG G
Sbjct: 939 PASG--------LSSPVLVRTDRNTVDLRGMRAHEVESALDSAIDRSVQMGSLWIIHGHG 990
Query: 716 TGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
+G +K V E LR HP V +++ SP + G TVA ++
Sbjct: 991 SGRLKSVVREYLRGHPHVDSFQEASPSDGGSGVTVAVLR 1029
>gi|333978122|ref|YP_004516067.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821603|gb|AEG14266.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 785
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 234/743 (31%), Positives = 360/743 (48%), Gaps = 105/743 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLD 67
RY L E+ TELE+KI I I D AS L IR +R E L+
Sbjct: 112 RYPLLEEIALTIGNFTELEKKIARAI-LPGGEIADDASTALSTIRRRLQRAQQQVKEQLE 170
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
S+++ A Q + + P++T R R V +K ++ +P GI + S+SGAT F+EP
Sbjct: 171 SIVRSPAYQKY----LQDPIVTIREGRYVVPVKQEYRAQVP-GIVHDQSASGATLFIEPM 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL +E E IL L+ +A E+ ++ + ++D ARA +++
Sbjct: 226 AVVESNNEVRRLQVAEKQEIARILGELSGAVAARGEELALSLEALGQLDFILARARYSEH 285
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+D V P L +N+ +HPLL GS
Sbjct: 286 LDAVEPRLLPAPR------LNLRQARHPLLSGSV-------------------------- 313
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPI I V + +VITGPNTGGKT ++KT+GL +LM+++GL++PA
Sbjct: 314 ----------VPISIHVGYQFDTLVITGPNTGGKTVTLKTVGLLALMAQSGLHIPAGEGS 363
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
L FD + ADIGD QS+EQ+LSTFS H++ IV IL V + SLVL+DE+G+GTDP+EG
Sbjct: 364 ELGVFDEVFADIGDEQSIEQSLSTFSSHLTNIVQILNQVGQGSLVLLDELGAGTDPAEGA 423
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA +IL+ L + V TTHY++L R ENA+ EF TL+PTYR+L G G
Sbjct: 424 ALAQAILERLHEMGAKTVATTHYSELKNFAYARERVENASVEFDAITLKPTYRLLIGKPG 483
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA IA+ +G +++RA+ + +Q + ++L Q L R++ E + A
Sbjct: 484 SSNAFEIARRLGLAPDLVERARSFM-----TAEQVQVADLMQQLERARQQAERELEEARR 538
Query: 488 LHAEIMDL---YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
+ E L Y+ + DE L R + A+ ++ +Q + A+ + + +++ +L
Sbjct: 539 MRQEAEGLKERYQALRDE---LAARRESILARAREEARQLVKRARQESEEAIRELRARLA 595
Query: 545 DASADEINSLIKESESAIAAIVE-----AHRPDDDFSVSETNTS----SFTPQFGEQVHV 595
D +A I+E+ +A + E A RP + V + S F P+F ++
Sbjct: 596 DEAARVREEAIREAREKLAVMQERLQVGAPRPKPEPGVIPESVSVGQTVFLPRFNQR--- 652
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
TVV +P + V VQ G +++ V P LR ED
Sbjct: 653 -------GTVVALP-EAGEVQVQVGMIKINV------------------PLAELRLPAED 686
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 713
S G + + ++ LDLRG+R EEA +++ L A S ++++HG
Sbjct: 687 --DTSRGEVRVASLVQDKTRSISTRLDLRGLRAEEALQEVEKYLDDATLAGLSRVYLVHG 744
Query: 714 MGTGVVKERVLEILRNHPRVAKY 736
GTG ++ + + L+ RV +
Sbjct: 745 KGTGALRAAIQQQLKTDRRVKSF 767
>gi|295696872|ref|YP_003590110.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
gi|295412474|gb|ADG06966.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
Length = 783
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 227/703 (32%), Positives = 338/703 (48%), Gaps = 92/703 (13%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS +L +R RKR + + LD L++ Q + + +PL+T R R CV
Sbjct: 145 ILDGASSELAALR-RRKRALADRIRGALDELIRNPNTQKY----LQEPLVTVRDGRYCVP 199
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
++ K GI + S+SG T+F+EP V N L E E IL L+A +
Sbjct: 200 VRVEFKNSF-RGIVHDQSASGQTWFIEPAAIVPLGNELRGLEAQEEREIERILVRLSALV 258
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + ++ + +D A A++ AQ MD V P H + + +HPL+
Sbjct: 259 GQEESGLSKAVECLGRLDFALAKSRLAQQMDAVSP------HFVGGGKLRLRRCRHPLIP 312
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+ VP+D+ + E ++ITGPNT
Sbjct: 313 KERV-----------------------------------VPVDVLIGDEYHALIITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KT GL + M++AGL++PA L F+ I ADIGD QS+EQ+LSTFSGH+
Sbjct: 338 GGKTVVLKTAGLLTCMAQAGLFIPAAEGSELSVFERIFADIGDEQSIEQSLSTFSGHMKH 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I++IL+ V+ SLVL+DEIG+GTDP+EG ALA +ILQ+ DR + TTHY DL
Sbjct: 398 IIEILDQVNERSLVLLDEIGAGTDPAEGAALAEAILQFFVDRGIRTIATTHYGDLKAFAY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
NA+ EF ETLRPTYR+L G G SNAL +A +G ++I+ RA R R
Sbjct: 458 TTPGVMNASVEFDPETLRPTYRLLIGVPGRSNALAVAARLGLGQEILDRA-----RHRLG 512
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
R ++ + L R + +A A E L ++ E E + + A + T
Sbjct: 513 ADDVRVEDMIRQLETARNQAREEADRARLDREEASRLRQQWESEVRRWEAEA----DQRT 568
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS-- 576
Q ++ +Q + V+D +LR S ++ +SL + + + ++ +P +
Sbjct: 569 AQAEERARRIVLQAEREVKDVLEELRRLSREDRSSLKEHQFTELRQRLDRVKPAFRYGRR 628
Query: 577 -VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
S T TP G+ V V S G K TV+E+ G + LVQ G ++ RV P+
Sbjct: 629 VPSSTGEDFGTPGPGDAVEVVSFGQK-GTVLEIQGKE--ALVQIGALKTRV------PVA 679
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+++ A PA + + G+ G E LDLRG VEEA ++
Sbjct: 680 ALRKQKAPAPAAPVSVAV---RRGADGVGME--------------LDLRGKTVEEAIPEI 722
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
D L A + + +IHG GTG ++ V LR+HP V +
Sbjct: 723 DQYLDRAVLAGLATVHLIHGKGTGALRSGVQTYLRSHPHVRSF 765
>gi|323702088|ref|ZP_08113756.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333923406|ref|YP_004496986.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532970|gb|EGB22841.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333748967|gb|AEF94074.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 783
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 231/739 (31%), Positives = 371/739 (50%), Gaps = 98/739 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA---ERKRNMENLDS 68
RY L EL + +LE+ I I I D + E L++ R + R E ++S
Sbjct: 111 RYPLLNELAEALTIQAQLEKNILRAILPGGEIADDASPELLQIRRGLARAQNRVRERMES 170
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+++ Q + + P+IT R R V +K ++ +P GI + S+SGAT F+EP
Sbjct: 171 IIRSSENQKY----LQDPIITIRNDRYVVPVKQEYRNQIP-GIVHDQSASGATLFIEPMA 225
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
AVE NN RL +E E IL L+ ++ ++ MD + ++D A+A +++ +
Sbjct: 226 AVEANNEVRRLMVAEQQEIQKILVELSNGVSAIAEDLTITMDALGQLDFIMAKARYSRTL 285
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ + P + + V +I+ +HPLL
Sbjct: 286 NALSPTIIDGARV------DIKKGRHPLL------------------------------- 308
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
+ VP I + + R +VITGPNTGGKT ++KT+GL +LM+++GL++PA+
Sbjct: 309 -----GEDAVPATISLGKDFRTLVITGPNTGGKTVTLKTVGLFTLMTQSGLHIPAEAGSE 363
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+ F+ + ADIGD QS+EQ+LSTFS H++ IV+IL SLVL+DE+G+GTDP+EG A
Sbjct: 364 MGIFNQVFADIGDEQSIEQSLSTFSSHMTNIVNILNRADTGSLVLLDELGAGTDPTEGAA 423
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA +IL+ L R + TTHY++L ENA+ EF +ETLRPTYR+L G G
Sbjct: 424 LARAILEELHGRGACTIATTHYSELKNYAYTTPGVENASVEFDVETLRPTYRLLIGRPGR 483
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I+ +G I+QRA++ + +Q + ++L L + ++ E AA L
Sbjct: 484 SNAFEISARLGLQPAIVQRARQFL-----TTEQVQVADLINKLEQTQQAAERDREEAAIL 538
Query: 489 H---AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
EI + YR++E++ + ++R A L+ K ++ + + ++++ + V++ +L
Sbjct: 539 RRESEEIKERYRQLEEQLR--EKREAILE-KAYEEASKLVRASRLEAEEAVKELRAKLAQ 595
Query: 546 ASADEINSLIKESESAIAAI---VEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLG 599
A+A + IK++ + + V A P E T P + GEQV +
Sbjct: 596 ANARDREEAIKQARQKLQRVTSKVAAKEP-------ERTTPGEIPRQVKPGEQVFLPKYN 648
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K A V+ V GD+ V VQ G M++ V P LR+ E R +
Sbjct: 649 QK-AYVLSVSGDN--VQVQVGIMKMFV------------------PLKELRRVNEPRVTA 687
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
G S Y + ++ + SLDLRGM +EA +++ L A S + +IHG GTG
Sbjct: 688 H-GQSQVGQVYMDKAKSIETSLDLRGMTTDEALLEIEKYLDDAFIAGLSSVILIHGKGTG 746
Query: 718 VVKERVLEILRNHPRVAKY 736
++ V L+N+PRV +
Sbjct: 747 ALRAAVHRELKNNPRVKSF 765
>gi|379724074|ref|YP_005316205.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
gi|378572746|gb|AFC33056.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
Length = 794
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 369/736 (50%), Gaps = 90/736 (12%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGID 84
LE++I CID ++ D AS +L IR+E + + E L+ +++ + Q +
Sbjct: 137 LEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTPSIQKM----LQ 191
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ NN L E
Sbjct: 192 DNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMNNRVRELKLKEE 250
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P+L+ + +
Sbjct: 251 AEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLPLLNDRGFIKLK 310
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+HPL+ AS N VP+D+++
Sbjct: 311 RG------RHPLI----------ASENV-------------------------VPLDVEL 329
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD I ADIGD QS
Sbjct: 330 GGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYADIGDEQS 389
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL Y+ R+G
Sbjct: 390 IEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYMH-RMGCR 448
Query: 385 VV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+V TTHY +L NA+ EF ++TLRPTYR+L G G SNA IA+ +G R
Sbjct: 449 IVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLSRS 508
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
II+ A+ V ++ R + +L + + E++ TA L E+ L ++ E
Sbjct: 509 IIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREVETLREKLNAER 563
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
+ + L K ++ ++ + A+ + + V+ + R+ + + + E + +
Sbjct: 564 HRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKDHKLSELKKKLN 623
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
R + + + P G++V V +LG + V V + T VQ G ++
Sbjct: 624 DAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQEYT--VQLGILK 679
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
++V K ++ + + +K A P A SS + R + +K LDL
Sbjct: 680 MKVNKADLELVKQAPQKKAEPP--------------KATSSLKRT----RDENAKMELDL 721
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG VEEA ++D L + + +++IHG GTGV++ + E LR H V Y
Sbjct: 722 RGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKHKHVKSYRMG-- 779
Query: 742 MNY-----GCTVAYIK 752
NY G TVA +K
Sbjct: 780 -NYNEGGAGVTVAELK 794
>gi|337751036|ref|YP_004645198.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
gi|336302225|gb|AEI45328.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
Length = 794
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 369/736 (50%), Gaps = 90/736 (12%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGID 84
LE++I CID ++ D AS +L IR+E + + E L+ +++ + Q +
Sbjct: 137 LEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTPSIQKM----LQ 191
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ NN L E
Sbjct: 192 DNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMNNRVRELKLKEE 250
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P+L+ + +
Sbjct: 251 AEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLPLLNDRGFIKLK 310
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+HPL+ AS N VP+D+++
Sbjct: 311 RG------RHPLI----------ASENV-------------------------VPLDVEL 329
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD I ADIGD QS
Sbjct: 330 GGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYADIGDEQS 389
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL Y+ R+G
Sbjct: 390 IEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYMH-RMGCR 448
Query: 385 VV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+V TTHY +L NA+ EF ++TLRPTYR+L G G SNA IA+ +G R
Sbjct: 449 IVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLSRS 508
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
II+ A+ V ++ R + +L + + E++ TA L E+ L ++ E
Sbjct: 509 IIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREVETLREKLNAER 563
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
+ + L K ++ ++ + A+ + + V+ + R+ + + + E + +
Sbjct: 564 HRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKDHKLSELKKKLN 623
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
R + + + P G++V V +LG + V V + T VQ G ++
Sbjct: 624 DAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHIVDVVNAQEYT--VQLGILK 679
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
++V K ++ + + +K A P A SS + R + +K LDL
Sbjct: 680 MKVNKADLELVKQAPQKKAEPP--------------KATSSLKRT----RDENAKMELDL 721
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG VEEA ++D L + + +++IHG GTGV++ + E LR H V Y
Sbjct: 722 RGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKHKHVKSYRMG-- 779
Query: 742 MNY-----GCTVAYIK 752
NY G TVA +K
Sbjct: 780 -NYNEGGAGVTVAELK 794
>gi|386726811|ref|YP_006193137.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
gi|384093936|gb|AFH65372.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
Length = 775
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 370/736 (50%), Gaps = 90/736 (12%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGID 84
LE++I CID ++ D AS +L IR+E + + E L+ +++ + Q +
Sbjct: 118 LEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTPSIQKM----LQ 172
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ NN L E
Sbjct: 173 DNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMNNRVRELKLKEE 231
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P+L+ + +
Sbjct: 232 AEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLPLLNDRGFIKLK 291
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+HPL+ AS N VP+D+++
Sbjct: 292 RG------RHPLI----------ASENV-------------------------VPLDVEL 310
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD I ADIGD QS
Sbjct: 311 GGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFDAIYADIGDEQS 370
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL Y+ R+G
Sbjct: 371 IEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISILDYMH-RMGCR 429
Query: 385 VV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+V TTHY +L NA+ EF ++TLRPTYR+L G G SNA IA+ +G R
Sbjct: 430 IVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLSRS 489
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
II+ A+ V ++ R + +L + + E++ TA L E+ L ++ E
Sbjct: 490 IIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERVTAQELRREVETLREKLNAER 544
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
+ + L K ++ ++ + A+ + + V+ + R+ + + + E + +
Sbjct: 545 HRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKDHKLSELKKKLN 604
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
R + + + P G++V V +LG + V V + T VQ G ++
Sbjct: 605 DAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQEYT--VQLGILK 660
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
++V K ++ + ++ +K A P A SS + R + +K LDL
Sbjct: 661 MKVNKADLELVKHAPQKKAEPP--------------KATSSLKRT----RDENAKMELDL 702
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG VEEA ++D L + + +++IHG GTGV++ + E LR H V Y
Sbjct: 703 RGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKHKHVKSYRMG-- 760
Query: 742 MNY-----GCTVAYIK 752
NY G TVA +K
Sbjct: 761 -NYNEGGAGVTVAELK 775
>gi|78185392|ref|YP_377827.1| MutS 2 protein [Synechococcus sp. CC9902]
gi|78169686|gb|ABB26783.1| MutS 2 protein [Synechococcus sp. CC9902]
Length = 814
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 239/744 (32%), Positives = 384/744 (51%), Gaps = 80/744 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L++ L +LE+++ F ++ + + DRAS L +R + R+ + L L ++ A
Sbjct: 141 LIETMVTLPDLEQRLKFSLE-EGGRVADRASPPLAGLRQQWNGVRQERRDKLQELTRRYA 199
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ F + +I +R R + +KA + G + S+SG T F+EP+ + N
Sbjct: 200 S--F----LQDSVIAQRHGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGN 252
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
V + EE +L+ L+ +A+ ER + L++ +L +DLA AR + +W+ V P
Sbjct: 253 KLVDIEARIRKEEQRVLAELSDLVAQDERVLNSLVEILLALDLALARGRYGRWLGAVPPH 312
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L F + ++HPLL+ RS + +P+
Sbjct: 313 LLEDPEAPF----LLRDLRHPLLIWQHKRS------SGSPV------------------- 343
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI + V + RVV ITGPNTGGKT S+K+LGL +LM++AG+ +P P LPW
Sbjct: 344 ---VPISVDVSAQLRVVAITGPNTGGKTVSLKSLGLVALMARAGMLIPCSGRPSLPWCAQ 400
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGHI RI IL+ + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 401 VLADIGDEQSLQQSLSTFSGHIKRIGRILQALESGPVPALVLLDEVGAGTDPSEGTALAT 460
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNA
Sbjct: 461 ALLKALADRARLTIATTHFGELKALKYTDDRFENASVAFNAETLSPTYELLWGIPGRSNA 520
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G D ++ +AQ L+ + + + Q L E+R++ ++ A AA+L A
Sbjct: 521 LAIATRLGLDAGVLDQAQALLA----LAAEGEVNTVIQGLEEQRQRQQAAAEDAAALLAR 576
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + ++ A + + Q+++Q + + ++ ++++ +LRD AD
Sbjct: 577 TELLHEELLLRWQKQKQQTALHQEQGRQRLEQSIREGQKEVRSLIR----RLRDGRAD-- 630
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + + + HRP + + P+ GE+V + +LG K A V+ + D
Sbjct: 631 GETARKAGQRLRKLEDHHRPTKE---KRAPKPGWRPEVGERVRLLALG-KAAEVLAISDD 686
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V+ G MR V N + + RK + + G
Sbjct: 687 GLQLTVRCGVMRTTVDLNAVESLDG-------------RKAEPPPVPVVKVQARSGLGAG 733
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+V+TS+N+LD+RGMRV EA ++ L + L+VIHG+GTG +K + L P
Sbjct: 734 AQVRTSRNTLDIRGMRVHEAESTVEEQLR--NANGPLWVIHGIGTGKLKRGLRAWLDTVP 791
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
RV EQ GC+V +++
Sbjct: 792 YVERVVDAEQ-GDGGPGCSVVWVR 814
>gi|392391882|ref|YP_006428484.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390522960|gb|AFL98690.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 789
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 230/744 (30%), Positives = 359/744 (48%), Gaps = 105/744 (14%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGG 82
+EE+I CI D + + D+AS L +R + R E LD +++ A Q
Sbjct: 131 IEEEITRCITEDGQ---VADQASPALADLRRGVSRLQTRIRETLDGIIRNPAYQKI---- 183
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ P+IT+R R V +K ++ P GI + S+SGAT ++EP V N +
Sbjct: 184 LQDPIITQRSERYVVPVKQEYRQSFP-GIVHDQSASGATLYIEPMAVVNLGNELREVVLK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL LL++ + I + + +D A+A ++ M+ P+L+ + +S
Sbjct: 243 EQREVQRILLLLSSRVEGEAEAIADAHEALARVDFILAKARLSEEMNAGAPVLTEKQEIS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPLL G VP+ I
Sbjct: 303 LVQA------RHPLLTGKV------------------------------------VPLTI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ VV+TGPNTGGKT ++KT+GL + M++ GL++PA++ R+ F I ADIGD
Sbjct: 321 QLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I++ R SL+L+DE+G+GTDP+EG ALA +I+ L +R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIVQKADRRSLILLDEVGAGTDPTEGSALAMAIIAELHERGA 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L TR ENA+ EF E+LRPTYR+L G G SNA IA +G
Sbjct: 441 RIVATTHYGALKNFAYNTTRVENASVEFDSESLRPTYRLLVGIPGKSNAFYIAGRLGLPE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++ RA+ V ER+ ++L ++L + +R+++ + R A + + IE E
Sbjct: 501 GVLDRARTFV----TEREMQ-VADLIENLEDTQREIDLEKRRA-------REERQAIEKE 548
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ L ++ L+ + Q+ + AK Q +V++ + + DE+ +KE
Sbjct: 549 SIGLKEKSQKLE----DEYQELMAMAKDQAVEIVREARREA-ERLIDELKLALKEERKDQ 603
Query: 563 AAIVEAHRPDDDFS--VSETNTSSFTPQ--------FGEQVHVKSLGDKLATVVEVPGDD 612
AI + S V E +T + Q G+ V++ L K V+++P
Sbjct: 604 QAIERTRQGIRKLSNKVGEQDTPARATQGVDPQEIKLGQMVYMTKLRQK-GQVLKLPNAS 662
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+ VQ G +++ V + IR I K A P R G G +
Sbjct: 663 GEIFVQAGVIKLNVPLSEIRLIQEEK---VAKPT---------RSVGGQGKVGMK----- 705
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+ +T + +DLRGM VEEAS++LD L A ++VIHG GTG ++ + E LR H
Sbjct: 706 KAETIRTEIDLRGMMVEEASYELDKYLDDAVLTGVGQVYVIHGKGTGALRLGIHEFLRGH 765
Query: 731 PRVAKYE--QESPMNYGCTVAYIK 752
V + Q + G TV +K
Sbjct: 766 HHVKSFRLGQHGEGDLGVTVVELK 789
>gi|304404921|ref|ZP_07386581.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
gi|304345800|gb|EFM11634.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
Length = 788
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 232/752 (30%), Positives = 375/752 (49%), Gaps = 87/752 (11%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL 66
H P+ L + L+E E+ I CID + +D+AS +L +R R + N
Sbjct: 109 LHDDDPIPLLHDIADLLSEHKPTEDAIFACIDDNAEV-MDQASPELASVR----RELRNG 163
Query: 67 DSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
+S +++ Q+ ++ + K L IT R R + +K+ ++ GI + SSSGAT
Sbjct: 164 ESRIREKLEQMIRSSSVQKMLQDAIITLRNDRYVIPVKSEYRSNF-GGIVHDQSSSGATM 222
Query: 123 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
F+EP+ V NN L +E E +L LTA A+ ++ + + +D AFA+A
Sbjct: 223 FIEPEVIVSMNNKLRELRANEEREIEKVLQKLTAIAAEVSDDLLADAEGLGMLDFAFAKA 282
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
A + P+++ + + +HPLL
Sbjct: 283 RLAHELKATLPLMNDRGFLKLKRG------RHPLL------------------------- 311
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
+D VPID+++ +++TGPNTGGKT S+KT+GL SLMS +GL++P
Sbjct: 312 ----------AADAVVPIDVELGNSFSTIIVTGPNTGGKTVSLKTIGLLSLMSMSGLFIP 361
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A++ ++ FD I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTD
Sbjct: 362 AEDGSQMCVFDAIYADIGDEQSIEQNLSTFSSHLTNIIRILNAMTPKSLVLLDELGAGTD 421
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P+EG ALA +IL+++ + V TTHY++L NA+ EF + TL PTYR+L
Sbjct: 422 PAEGSALAIAILEHIHRKGSRIVATTHYSELKAYAYNRNGVINASMEFDVATLSPTYRLL 481
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
G G SNA IA+ +G ++II A+ V R + SL E+R E++
Sbjct: 482 VGVPGRSNAFAIAERLGLSQQIIDHARGEV-----SEDDMRVENMIASLEEDRLSAETER 536
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN- 541
++A SL E+ L + E + + + L K ++ + + AK++ + ++ D
Sbjct: 537 QSAESLRRELEQLREKHAAEQQRFEEQRDKLLLKAQEEARAAVRKAKLEAEQIISDLRKL 596
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
L + ++ + + LI+ A E H+P + S ++ P G++V V SL K
Sbjct: 597 ALEEGASVKEHKLIEARRKLDEASPELHKPKPAANRS-GKSAKIGP--GDEVRVYSLNQK 653
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+V+E+ G + LVQ G M+++V +++ + K AA KQQ+ +Q+ S
Sbjct: 654 -GSVIELTGSE--ALVQLGIMKMKVSLDDLELL---KSTEAAA------KQQQPKQAASL 701
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
+ +E ++ LDLRG ++EA + D L A + +IHG GTGV+
Sbjct: 702 KRTRDE--------SAAMELDLRGASLDEALIEADRFLDEAFLAGFGRVHLIHGKGTGVL 753
Query: 720 KERVLEILRNHPRVAKYE--QESPMNYGCTVA 749
+ + + LR H V Y Q G TVA
Sbjct: 754 RNGIQDFLRRHKHVKNYRIGQYGEGGTGVTVA 785
>gi|350269070|ref|YP_004880378.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
gi|348593912|dbj|BAK97872.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
Length = 795
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 224/710 (31%), Positives = 361/710 (50%), Gaps = 95/710 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + +L+++ + + + + LIT+R R V +KA
Sbjct: 146 ISDNASPELNDIRRKMRAAQAKSRQVLQRIISSPSYSKVLQESLITQRDGRFVVPVKAEQ 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K LP G+ +VSS+GAT F+EP G V+ NN + L E E IL+ L+A+ A
Sbjct: 206 KAALP-GLVHDVSSTGATLFVEPMGVVQANNEYIELEAREKKEIERILAELSADAANHRE 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I++ D ++ +DL FAR + +DGV P + D +I + +HPLL +
Sbjct: 265 DIQWDYDALVHLDLIFARGQLSYKLDGVRP------EIRRDGAIVLRKARHPLLDRAK-- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPIDI++ +VITGPNTGGKT
Sbjct: 317 ---------------------------------AVPIDIELGDSFDTLVITGPNTGGKTV 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KTLGL +LM++ GL++PA + ++ ++ +LAD+GD QS+EQ+LSTFS H++ IV IL
Sbjct: 344 SLKTLGLLTLMAQCGLHIPAASGSQISVYERVLADVGDEQSIEQSLSTFSAHMTSIVRIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ + +LVL DE+G+GTDP EG ALA +I+Q +R TTHYA+L
Sbjct: 404 QETDQRTLVLFDELGAGTDPVEGAALAIAIIQQVRRFGAKLAATTHYAELKTFAMTTAGV 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ--RAQKLVERLRPERQQ 461
ENA+ EF +E+L+PTYR+L G G SNA I++ +G +++ +AQ + +R E
Sbjct: 464 ENASCEFDVESLQPTYRLLIGIPGKSNAFAISRRLGLPDDVVEDAKAQMAGDSVRFE--- 520
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK-------DLDRRAAHLK 514
++ L ++R+ LE + E+ LY++ E++A+ ++R + +
Sbjct: 521 ----DVLTQLEQKRQALEKK-------QVEVDRLYQQREEDARKGREFRTQMERARDNAR 569
Query: 515 AKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAI-AAIVEAHRP- 571
++ ++ L AK D + + E + + A AD +L E+++AI + EA
Sbjct: 570 SRGEADARRILRDAKAAADQTMNELAELRRQQAKADAAQNL-NEAQAAIRRGLNEAEEKL 628
Query: 572 -DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
+F+ S Q G+QV + + LA VV V G D + +Q G+M++ VK N
Sbjct: 629 RSREFAPEPIPRPSRPIQKGDQVEIPGV-KTLAEVVSV-GKDGVLQLQAGRMKMTVKANE 686
Query: 631 IRPI--PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+R + P ++K PA +R + +A SS LD+RGM
Sbjct: 687 VRLVEEPAGRKK----PAVSIRPHAAQQLLRTAASSE---------------LDIRGMES 727
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EA ++ ++ A + +IHG GTGV+++ V +ILR + V +
Sbjct: 728 IEAESVVENFLSAAVMGRLETVTIIHGKGTGVLRKTVHDILRRNKAVKSF 777
>gi|220931412|ref|YP_002508320.1| MutS2 family protein [Halothermothrix orenii H 168]
gi|254766598|sp|B8D298.1|MUTS2_HALOH RecName: Full=MutS2 protein
gi|219992722|gb|ACL69325.1| MutS2 family protein [Halothermothrix orenii H 168]
Length = 791
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 240/762 (31%), Positives = 367/762 (48%), Gaps = 114/762 (14%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS + E L +LE +I CID + I D AS L IR E R ++ L
Sbjct: 121 YSIITEKFDRLTPLKQLENEINRCID-EHGEIKDSASRKLRSIRREMDRIEGKINDKLNS 179
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + L+T R +R V +K+S+K GI + S+SG TYFMEP V+
Sbjct: 180 IINNTRYQEMLQDKLVTIRGNRYVVPVKSSYKNTFS-GIVHDQSTSGLTYFMEPMAIVKL 238
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L +E E IL L+ I + R++ ++ V +D+ FARA F+ ++G+
Sbjct: 239 NNRLGELKRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIE 298
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P ++ + INI G +HPLL +K
Sbjct: 299 PGINDKGF------INIRGGRHPLL----------------KVK---------------- 320
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
PVPIDI V E + +VITGPNTGGKT ++KT+GL LM +AGL++PA+ + F
Sbjct: 321 ----PVPIDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIF 376
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ + ADIGD QS+EQNLSTFS HI+RI L SLVL+DEIG GTDP EG AL +
Sbjct: 377 NGVYADIGDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVA 436
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL++LR+R + TTHY+++ ENA+ EF +ETL+PTYR+L G G SNA
Sbjct: 437 ILEHLRERGVTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAF 496
Query: 433 NIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
IA +G II+ ++L VE + + + RK Y+ L K+E + R
Sbjct: 497 EIALKLGLPHDIIKDGKELMSGDDIKVENIISDLNEERKK--YEQL-----KIEIEERLE 549
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
A E ++ + DL++R L + ++ Q + + + +++ +N+
Sbjct: 550 AVKKKE-----QKYDSLLTDLEKRKKKLITEAREEALQIIKKTRKESKEILRRLKNKEFA 604
Query: 546 ASAD------EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
+ +D EIN +KE+E I+ + D V E + G+QV +K G
Sbjct: 605 SRSDIDRVENEINLNLKETEKEISE--KRQNKDGRTRVKEISC-------GDQVRLKKTG 655
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP--IPNSKRKNAANPAPRLRKQQEDRQ 657
K V+ V + ++Q G M+V + + IP+ K+ + +++K+
Sbjct: 656 QK-GEVISVDREKGEAVIQAGIMKVTTGLDEVAKIDIPDDT-KDELFHSYQVKKK----- 708
Query: 658 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIH 712
+ P +LDLRG R E A H+L D+ LA + + +IH
Sbjct: 709 ----------SRVSP-------TLDLRGERYETAQHKLDKYLDDVFLAGLKQ---VEIIH 748
Query: 713 GMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
G GTG +++ V +L +P + Y ++ G T+A +K
Sbjct: 749 GKGTGALRKAVHTVLEKNPHITSYRLGRQEEGGSGVTIADLK 790
>gi|392960889|ref|ZP_10326353.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|421054879|ref|ZP_15517843.1| MutS2 family protein [Pelosinus fermentans B4]
gi|421058104|ref|ZP_15520836.1| MutS2 protein [Pelosinus fermentans B3]
gi|421063592|ref|ZP_15525555.1| MutS2 protein [Pelosinus fermentans A12]
gi|421071758|ref|ZP_15532871.1| MutS2 protein [Pelosinus fermentans A11]
gi|392439982|gb|EIW17670.1| MutS2 family protein [Pelosinus fermentans B4]
gi|392446346|gb|EIW23631.1| MutS2 protein [Pelosinus fermentans A11]
gi|392454456|gb|EIW31288.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|392461473|gb|EIW37661.1| MutS2 protein [Pelosinus fermentans B3]
gi|392462624|gb|EIW38682.1| MutS2 protein [Pelosinus fermentans A12]
Length = 787
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 215/685 (31%), Positives = 336/685 (49%), Gaps = 81/685 (11%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IR + R + LD +L+ Q + L+T R R + IK ++ P GI +
Sbjct: 158 IRLSQSRIKDKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQEYRNHFP-GIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
S+SGAT F+EP V NN +L+++E E IL T +IA I D +
Sbjct: 213 QSASGATVFVEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANVSETIYMNCDMLAN 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID AFA+A + M PI++++ +V N+ +HPL+
Sbjct: 273 IDFAFAKAKLSLTMQATMPIINNKGYV------NLRQARHPLIE---------------- 310
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
+D VPIDI + + ++ITGPNTGGKT ++KTLGL +LM
Sbjct: 311 -------------------ADVVVPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++AGLY+P +N + F+ I ADIGD QS+EQ+LSTFS H++ +V IL ++ E LVLI
Sbjct: 352 TQAGLYIPVQNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQITSEDLVLI 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DEIG+GTDP EG ALA SIL++L + + TTHY++L ENA+ EF ++T
Sbjct: 412 DEIGAGTDPDEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQGIENASVEFDIQT 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTYR+L G G SNA I+K +G +II +A + +++ H + E + +EE
Sbjct: 472 LRPTYRLLIGVPGSSNAFAISKRLGLSDRIIDQASQFIDK------DHAEFETVLNALEE 525
Query: 475 RRKLESQARTAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
++ + + + + RE + E L + + AK ++ + L + + +
Sbjct: 526 QKIAYDKLHEEVIQQEQTLHILREKLATEENVLAAKKHKILAKAQEEAESLLRKTRRETE 585
Query: 534 TVVQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
++ + + Q S I + +DD S+ S TP G
Sbjct: 586 EIITELKAQFTAKSNSSTRQGIFDKSRKRLRDNLENLNENEEDDNSLPIVTASVLTP--G 643
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
QV++ +L K TVV + ++ V+VQ G M++ V + R + +S P ++
Sbjct: 644 MQVYITTLKQK-GTVVSIGINE--VIVQLGIMKMNVAITDCRLVSDSV------PIKKIS 694
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVL 708
K + N + ++ ++Q +D+RGM VEEA + L I A S +
Sbjct: 695 KDK-----------NRDKNF-MKIQDVARQIDIRGMMVEEAEYALGKYIDDAIVAGLSTV 742
Query: 709 FVIHGMGTGVVKERVLEILRNHPRV 733
VIHG GTG +++ V L+NH V
Sbjct: 743 LVIHGKGTGALRKGVRTYLKNHHYV 767
>gi|390456779|ref|ZP_10242307.1| MutS2 protein [Paenibacillus peoriae KCTC 3763]
Length = 788
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 239/749 (31%), Positives = 369/749 (49%), Gaps = 97/749 (12%)
Query: 4 QECGNIFHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK 60
Q C H +P+ LL L+E LE I CID + LD AS +L IR E +
Sbjct: 103 QVCVASLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSASTELSQIRRELR 161
Query: 61 ----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 115
R E LDS+++ +++ Q LIT R R + +KA ++ GI +
Sbjct: 162 SGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQ 215
Query: 116 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 175
S SGAT F+EP+ V NN E E IL LTA +A+ + Y +D + +
Sbjct: 216 SGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNL 275
Query: 176 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 235
D FA+A A+ M P+++ + ++ +HPL+ PL
Sbjct: 276 DFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PL 313
Query: 236 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 295
+ VPID+++ +++TGPNTGGKT ++KT+GL SLM+
Sbjct: 314 EQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMA 354
Query: 296 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 355
+GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+D
Sbjct: 355 MSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLD 414
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 415
E+G+GTDP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL
Sbjct: 415 EVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGIINASMEFDVATL 474
Query: 416 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 475
PTYR+L G G SNA IA+ +G +I+ A+ V + R + SL + R
Sbjct: 475 SPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQRVEHMIASLEQNR 529
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
E + A L E+ L + E L+ + + K + + ++ A+ + + +
Sbjct: 530 LTAEQEREKAEQLRTEMEALRSRHQTELDKLESQRDRMLEKAEDEARVLVDKARSEAEKI 589
Query: 536 VQDFENQLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSVSETNTSSFTPQF 589
+ D LR + +E S +KE + IAA E R + + T T S
Sbjct: 590 ISD----LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKRAATRTRSIMA-- 641
Query: 590 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 649
G++V V SL K VVE+ G + V VQ G M+++V +++ + + A PAPR+
Sbjct: 642 GDEVSVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL-----QPAQTPAPRV 694
Query: 650 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 707
+K +G + ++ +N LDLRG VEEA ++D + A +
Sbjct: 695 QKP----VTGVKRTRDDNV---------RNELDLRGANVEEALIEVDRFMDEAFLANLGQ 741
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +IHG GTGV++ + E LR H V Y
Sbjct: 742 VHIIHGKGTGVLRTGIQEYLRKHKHVKSY 770
>gi|160933325|ref|ZP_02080713.1| hypothetical protein CLOLEP_02170 [Clostridium leptum DSM 753]
gi|156867202|gb|EDO60574.1| MutS2 family protein [Clostridium leptum DSM 753]
Length = 791
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 244/732 (33%), Positives = 355/732 (48%), Gaps = 99/732 (13%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGID 84
LEEKI I + + D AS+ L IR A R E LD ++ A Q + +
Sbjct: 132 LEEKIASSILSEEEMA-DGASQALGDIRRKINAASLRVREKLDHMIHSPAYQKY----LQ 186
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+P++T R R V +KA + +P G+ + S SGAT F+EP VE NN L + E
Sbjct: 187 EPIVTLRGGRFVVPVKAECRGEVP-GLVHDTSGSGATVFVEPMAVVEANNDIKVLKSKEE 245
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
AE IL L+ E I + +E+D+ FA+A A M P ++ Q +
Sbjct: 246 AEIERILYELSQEAGGFADSIIEGYNAAIELDILFAKAKLAYRMKATLPEVNDQGKIYLK 305
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+ +HPL+ +P K + V DI++
Sbjct: 306 KA------RHPLI---------------DP----------------KAV----VATDIEL 324
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +VITGPNTGGKT S+KT+GL +LM+ GL LPA + + F +LADIGD QS
Sbjct: 325 GLQFDTLVITGPNTGGKTVSLKTIGLLTLMAMCGLLLPASDGSMVSVFSQVLADIGDEQS 384
Query: 325 LEQNLSTFSGHISRIVDILELVSRE--SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
+EQ+LSTFS H++ ++ IL V RE SLVLIDE+G+GTDP EG ALA +IL+ LR
Sbjct: 385 IEQSLSTFSAHMTNMIHILSSVEREGISLVLIDELGAGTDPVEGAALAMAILETLRASQV 444
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
TTHYA+L + EN EF + TLRPTYR+L G G SNA I++ +G D+
Sbjct: 445 RIAATTHYAELKAYALQTAGVENGCCEFDVATLRPTYRLLIGVPGRSNAFAISERLGMDQ 504
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
I+ RA++LV + R ++ ++L E R+ LE + + A L A+ +E E
Sbjct: 505 HIVARARELV-----SAENSRFEDVVRNLEESRQSLEQERKEAQELSAQAQQYRQEAEQR 559
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR------DASAD-EINSLI 555
A+ L RR + + ++ + + L + D + LR DA A + + I
Sbjct: 560 AEKL-RRDSEAELEKARVEARNLVARARAQAQALMDELDDLRKKNREIDAQAKARLKAGI 618
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
+E E+ + E + +D+ + Q G+ V + L DK A V+E V
Sbjct: 619 REMENTADPVKE--KQGEDYRLPR------ALQAGDSVLIYDL-DKKAVVLEPADSSGNV 669
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
LVQ G ++ RV N+R + K++ P R + + R S
Sbjct: 670 LVQAGIIKTRVPVGNLRLL---KQEKVQKPKGRGVRTVKTRASAPV-------------- 712
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ +DLRGM VEE +LD I A ++L VIHG GTGV+++ V E L+ HP V
Sbjct: 713 --QQEVDLRGMTVEEGIMELDNFIDSALLSGITLLTVIHGKGTGVLRKAVQERLKRHPSV 770
Query: 734 AKYEQESPMNYG 745
Y NYG
Sbjct: 771 KSYRLG---NYG 779
>gi|123965482|ref|YP_001010563.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9515]
gi|123199848|gb|ABM71456.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9515]
Length = 803
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 219/722 (30%), Positives = 363/722 (50%), Gaps = 89/722 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I DRAS+ L +R E L+ K I ++ R R + IK +
Sbjct: 158 ISDRASQKLANLRQELLSKKSERRVLVNKFIQNNLPY--IQDTIVGDRYGRPVLAIKVQY 215
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIA 159
GI + S+SG T ++EP+ V N ME R++ EE +L + I
Sbjct: 216 AEKFK-GIIHDSSASGNTIYLEPESIVLKGNKIASMEARVA----GEEFKLLKEWSHIIR 270
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ + + + + +L + + R+ ++ W+ G PI+ + VS + G HPLL+
Sbjct: 271 DNNQSLLEMSNILLRAEFSLTRSRYSNWIGGNAPIVENSPIVS------LMGFSHPLLIW 324
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ + +A PV ID ++ T+VV ITGPNTG
Sbjct: 325 ENKKKQAAK----------------------------PVSIDFHIDRNTKVVAITGPNTG 356
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++K LG+A LM+++GL++P+ P +P+ I DIGD QSLE NLSTFSGHI RI
Sbjct: 357 GKTVALKGLGIALLMARSGLFIPSIQKPIIPFCPNIFVDIGDDQSLEGNLSTFSGHILRI 416
Query: 340 VDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+ + + TTHY D+ L
Sbjct: 417 KNILEALNNKKGFSVVLLDEIGSGTDPSEGTALAIALLKEFAIVSDITLATTHYGDIKAL 476
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
K D RFEN + F E+ +P Y + WG G SNAL+I+K IG + KI+ A L+
Sbjct: 477 KYSDNRFENVSVAFDEESFKPKYTLNWGIPGRSNALSISKRIGINEKILNNASNY---LK 533
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
P ++ + + + L EER K + A AA L A L+ EI+++ + A ++
Sbjct: 534 P-KEVENINNIIKGLEEERLKQQKSAEEAAELIARTEILHDEIKNKYEFQKLNALKIQEA 592
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKESESAIAAIVEAHRPDD 573
E Q++ + + A+ ++ +++ ++Q +A+ ++ I +KE E+ D
Sbjct: 593 EKQKLSKHIKEAQKEVINLIKKLKDQ--NATGEDARLIGIRLKEIET------------D 638
Query: 574 DFSVSETN-TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
+ S T+S++P+ G+ + +KSL ++++ + V+ G R + N+
Sbjct: 639 HLTQSNVERTTSWSPKIGDFIKIKSLNSS-GQIIDIDEKAKSYEVKCGSFRSTLSINDFE 697
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
+ K P+ + Q S E+ S+ +++TSKN++D+RGMRV EA
Sbjct: 698 GLNGEK--------PKFKDSQIQ-----ISSVREDFSFS-KIRTSKNTIDVRGMRVHEA- 742
Query: 693 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 750
++ I + L+++HG+GTG +K+ + L + V K E + + GC++A+
Sbjct: 743 -EIIIEEKFKKFHGPLWIVHGIGTGKLKKGLRLWLSSLNYVDKVEDAENNEGGAGCSIAW 801
Query: 751 IK 752
IK
Sbjct: 802 IK 803
>gi|354559953|ref|ZP_08979193.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
gi|353539467|gb|EHC08953.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
Length = 792
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 225/747 (30%), Positives = 365/747 (48%), Gaps = 108/747 (14%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 84
+E++I CI + + D+AS L R ++R + L+ +++ A Q +
Sbjct: 131 IEDEISRCISEEGSVA-DQASPQLGEFRRSITRLQQRIRDTLEGIVRNSAYQKI----LQ 185
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
P+IT+R R V +K ++ GI + S+SGAT ++EP V N + E
Sbjct: 186 DPIITQRSDRYVVPVKQEYRQAF-SGIVHDQSASGATLYIEPMAVVNLGNELREVILKEQ 244
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL L+A++ I + + ++D A++ ++ M+ P LS Q +
Sbjct: 245 REVQRILLQLSAQVEGEAERIADAHEALAQVDFILAKSHLSESMNSGAPELSDQQEIKLV 304
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+ +HPLL GS VP++I++
Sbjct: 305 QA------RHPLLSGSV------------------------------------VPLNIEL 322
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+VITGPNTGGKT +++T+GL S M+++GL++PA+ + RL F I DIGD QS
Sbjct: 323 GKRFDTIVITGPNTGGKTVALRTVGLLSAMAQSGLHIPAEANSRLGIFTQIFVDIGDEQS 382
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFSGH+ IVDI+ SL+L+DEIG+GTDP+EG ALA SI+ L +R
Sbjct: 383 VEQSLSTFSGHMKNIVDIVLGADSHSLILLDEIGAGTDPTEGAALAMSIITELHERGCRI 442
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTHY L R ENA+ EF +ETLRPTYR+L G G SNA IA +G + +
Sbjct: 443 IATTHYGALKSFAYNTPRVENASVEFDVETLRPTYRLLIGIPGKSNAFYIASRLGLNDTV 502
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
++RA+ V ER+ + ++L +L + +R +E + R I++E K
Sbjct: 503 LERAKSFV----TEREM-QVADLIDNLEDTQRDIEREK--------------RRIQEERK 543
Query: 505 DLDRRAAHLKAKE---TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
++ ++ LKAK + Q+ L A+ + V++ ++ + +++ +KE
Sbjct: 544 TIETESSQLKAKSLKLEEDYQELLALAQDEATEVLRQTRHEA-ELLIEDLKQALKEENKD 602
Query: 562 IAAIVEAHRPDDDFS------VSETNTSS---FTPQ---FGEQVHVKSLGDKLATVVEVP 609
AI A + S E TS+ P+ G+ +++ L K V+++P
Sbjct: 603 QHAIEHARQRIKKLSNKVGTKEKEIRTSAGGGINPEEIKLGQTLYLTKLRQK-GHVLKLP 661
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D+ VLVQ G M++ V+ + +R + K + P ++ E G G S
Sbjct: 662 TDNGEVLVQVGVMKLNVQLSEVRLVQEEK---VSTP-----RRAETFGQGRIGMS----- 708
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ Q + +DLRGM V+EA+ +LD L A ++++IHG GTG ++ + E L
Sbjct: 709 ---KAQNVRTEIDLRGMMVKEATEELDKYLDDAVLTGAGLVYIIHGKGTGALRAGIQEFL 765
Query: 728 RNHPRVAKYE--QESPMNYGCTVAYIK 752
+ HP V + Q + G TV +K
Sbjct: 766 KGHPHVQSFRLGQHGEGDLGVTVVELK 792
>gi|375084730|ref|ZP_09731589.1| MutS2 family protein [Megamonas funiformis YIT 11815]
gi|374567865|gb|EHR39064.1| MutS2 family protein [Megamonas funiformis YIT 11815]
Length = 789
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 227/738 (30%), Positives = 361/738 (48%), Gaps = 102/738 (13%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 73
E K+ L +LE +I +D + + D AS +L IR E ++R NLD +LK
Sbjct: 117 EWAKSIEILGQLEREIDNIVD-EHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNP 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
Q + I +T R R + IK ++ P G+ + SSSG+T F+EP V+ N
Sbjct: 176 DYQKYFQDNI----VTIRDERYVIPIKQEYRQQFP-GVVHDQSSSGSTLFIEPMSIVDLN 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E IL +++ +IA++ + + + + ++D AFA+A A+ M P
Sbjct: 231 NDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + +N+ +HPLL
Sbjct: 291 ------EINDEGIVNLAKARHPLL-----------------------------------N 309
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
D VPIDI++ R ++ITGPNTGGKT SMKTLGL LM+++GL++P ++ ++ F
Sbjct: 310 KDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQ 369
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H+ IV+IL + + L+L+DE+GSGTDP EG ALA SI
Sbjct: 370 NVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSI 429
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ L D V TTHY +L ENA EF +++LRPTYR+L G+ G SNA
Sbjct: 430 LERLMDIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFA 489
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEI 492
I+K +G +I RAQ+L+ + H + E + +L E+ E + A I
Sbjct: 490 ISKRLGLSDTLILRAQQLI------KADHAQFENVLNTLENEKLMYEQKNADIAERQQRI 543
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
L +++ D +++ ++ K +Q L + + + ++++ + Q D
Sbjct: 544 EKLEKQLADMKQEMAKKKEQTLRKTKEQCASLLRRTRRESEEIIKELKAQFNDQG----- 598
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL--GD--------KL 602
+K+ + I A R D VS+ N P GE V +K++ GD +
Sbjct: 599 --MKKRQETIDAARHKLRGRLD-KVSQQNDDPNKP--GEAVDIKTIAVGDIVYVNKLRQK 653
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
T+ ++ G + T VQ G +++ VK + + ++ + P+ + AG
Sbjct: 654 GTITDISGKELT--VQLGSLKMNVKAKDCSFVSHAVKVKETAPSKK------------AG 699
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGV 718
N A +V +D+RG+ V+EA S LD A+ SR + +IHG GTG
Sbjct: 700 GFNMLA----KVSQISTEVDIRGLMVDEAIEVVSKYLDDAVISGLSR--VLIIHGKGTGA 753
Query: 719 VKERVLEILRNHPRVAKY 736
+++ + E L+NH V Y
Sbjct: 754 LRKGIQEYLKNHRNVLSY 771
>gi|421078676|ref|ZP_15539628.1| MutS2 protein [Pelosinus fermentans JBW45]
gi|392523253|gb|EIW46427.1| MutS2 protein [Pelosinus fermentans JBW45]
Length = 787
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 339/690 (49%), Gaps = 91/690 (13%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IR + R + LD +L+ Q + L+T R R + IK ++ P GI +
Sbjct: 158 IRLSQSRIKDKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQEYRNHFP-GIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
S+SGAT F+EP V NN +L+++E E IL T +IA I D +
Sbjct: 213 QSASGATVFVEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANVSETIYMNCDMLAN 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID AFA+A + M PI++++ +V N+ +HPL+
Sbjct: 273 IDFAFAKAKLSLTMQASMPIINNKGYV------NLRQARHPLIE---------------- 310
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
+D VPIDI + + ++ITGPNTGGKT ++KTLGL +LM
Sbjct: 311 -------------------ADVVVPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++AGLY+P +N + F+ I ADIGD QS+EQ+LSTFS H++ +V IL +S E LVLI
Sbjct: 352 TQAGLYIPVQNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQISSEDLVLI 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DEIG+GTDP EG ALA SIL++L + + TTHY++L ENA+ EF ++T
Sbjct: 412 DEIGAGTDPDEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQGIENASVEFDIQT 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTYR+L G G SNA I+K +G +II++A + +++ H + E + +EE
Sbjct: 472 LRPTYRLLIGVPGSSNAFAISKRLGLSDRIIEQASQFIDK------DHAEFETVLNALEE 525
Query: 475 RRKLESQARTAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
++ + + + + RE + E L + + AK ++ + L + + +
Sbjct: 526 QKIAYDKLHEEVIQQEQTLQILREKLATEESILAAKKHKILAKAQEEAESLLRKTRRETE 585
Query: 534 TVVQDFENQL--------RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
++ + + Q R D+ ++++ + E P + +
Sbjct: 586 EIITELKAQFTAKSNSSTRQGIFDKSRKRLRDNLENLNENEEDDNP-----LPIVTANVL 640
Query: 586 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 645
TP G QV++ +L K TVV + ++ V VQ G M++ V + R + ++ P
Sbjct: 641 TP--GMQVYITTLKQK-GTVVSIATNE--VTVQLGIMKMNVAITDCRLVSDN------FP 689
Query: 646 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWE 703
++ K + N + ++ ++Q +D+RGM VEEA + L I A
Sbjct: 690 IKKIAKDK-----------NRDKNF-MKIQDVARQIDIRGMMVEEAEYTLGKYIDDAIVA 737
Query: 704 SRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
S + VIHG GTG +++ V L+NH V
Sbjct: 738 GLSTVLVIHGKGTGALRKGVRTYLKNHHYV 767
>gi|225018643|ref|ZP_03707835.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
gi|224948551|gb|EEG29760.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
Length = 795
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 235/738 (31%), Positives = 356/738 (48%), Gaps = 116/738 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS +L IR + ++N ++LD ++K A + +IT R R V +
Sbjct: 145 IDDNASVELSNIRRKIRQNSTKARDSLDRIIKN------NAKYLQDSIITMRDGRYVVPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEI 158
KA H+ +P G+ + S+SGAT F+EP VE NN E+R L + E E IL+ L+AE
Sbjct: 199 KAEHRGEVP-GLVHDTSASGATLFVEPMSVVEANN-EIRVLMSKEQDEIERILAELSAEC 256
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A I+ ++ ++L FA+A M V P ++ ++S + +HPL+
Sbjct: 257 ADFAESIRNNFRLIILLNLYFAKANLGASMRAVKPFVTDDGYISLKKA------RHPLI- 309
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
D VPIDI++ ++ITGPNT
Sbjct: 310 ----------------------------------DKDKVVPIDIELGRGFTSLIITGPNT 335
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT S+KTLGL +LM+ GL +P + R+ FD +L DIGD QS+EQ+LSTFS H++
Sbjct: 336 GGKTVSLKTLGLLTLMTMCGLLIPVADQSRISIFDKVLVDIGDEQSIEQSLSTFSAHMTN 395
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ ILE SLVL+DE+GSGTDP EG ALA SI++ + R TTHYA+L
Sbjct: 396 IISILEEADDRSLVLVDELGSGTDPVEGAALAISIIEEISARGSRLAATTHYAELKAYAL 455
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---------- 448
+ ENA EF + TL+PTYR+L G G SNA I++ +G + I+ RA
Sbjct: 456 ETKGVENACCEFDVATLQPTYRLLIGVPGRSNAFAISRRLGLEEHILDRAEGYISSDNRR 515
Query: 449 -QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
+ +V+ L RQ + K ER +LE + R L+A ++ + K L+
Sbjct: 516 FEDVVDSLEQARQDYEK---------ERAELEEKNREYERLNA-------QLNAKRKGLE 559
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV- 566
H + ++ + ++ + + D ++ + E + ++ L + + S + +
Sbjct: 560 NAGEHEIERAREKAKYIVDKVRAESDALLNELEELRKQKEKTDVAELARRARSQMNGKIS 619
Query: 567 ----EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
EA+ + +ET + G++V V L DK A V+E P V+VQ G M
Sbjct: 620 RLYDEANPVRERMGTNETYKLPRPLRKGDEVLVYDL-DKQAVVLEEPDKSGNVMVQMGIM 678
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
+ RVK N+R I ++KN P+ + SN E S +K+ +D
Sbjct: 679 KTRVKLKNLRLI---EQKNPYKEKPK-------SSTTRTIKSNAERS-------AKSEID 721
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY---- 736
LRG VEEA LD I + + + +IHG GTGV++ V L+ H + Y
Sbjct: 722 LRGYTVEEALLDLDQFIDNCVLSNINQISIIHGKGTGVLRTAVQAHLKRHRSIKTYRLGT 781
Query: 737 --EQESPMNYGCTVAYIK 752
E ES G T+A +K
Sbjct: 782 YGEGES----GVTIAELK 795
>gi|384549903|ref|YP_005739155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302332752|gb|ADL22945.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 782
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 227/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + V + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEVKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|293500954|ref|ZP_06666805.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291095959|gb|EFE26220.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
Length = 780
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 109/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P + +Q
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKEKVKPTKMVTRQNR----- 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 699 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 743
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 744 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 780
>gi|406669612|ref|ZP_11076880.1| MutS2 family protein [Facklamia ignava CCUG 37419]
gi|405582954|gb|EKB56928.1| MutS2 family protein [Facklamia ignava CCUG 37419]
Length = 786
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 230/755 (30%), Positives = 370/755 (49%), Gaps = 87/755 (11%)
Query: 5 ECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME 64
E N F + L E ++ L E+E++I +D IILD AS +L IR + R +
Sbjct: 111 EENNQF--FPQLNEWVQKIVSLPEIEQRIDQTVDSDG-IILDTASSELNRIRRAQLRTEQ 167
Query: 65 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
++ L + +A + LIT R R + +K ++ G + SS+G T F+
Sbjct: 168 SIRETLNTIIKS--KANLLSDTLITIRNQRYVIPVKTDYRAQF-KGTVYDQSSTGQTLFI 224
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP+ NN L + E E IL +T ++ EI + +D ARA +
Sbjct: 225 EPQSVTNLNNQLAALRSEEKVEVDRILDEVTEQLLPYLSEINQNHYALGYLDYVQARAEY 284
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
+ ++G P LS + V I +HPL+ +P K V N
Sbjct: 285 SLAIEGTKPTLSPEREV------RIWQARHPLI---------------DP-KQIVAN--- 319
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
DI + + + ++ITGPNTGGKT +KTLG+ +M ++GLY+PA+
Sbjct: 320 ----------------DILIGGDYQSLIITGPNTGGKTILLKTLGMLQIMGQSGLYIPAE 363
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
++ FD + ADIGD QS+EQNLSTFS H++ IV I++ + +SL+L+DE+GSGTDP
Sbjct: 364 EASQIGIFDQVYADIGDEQSIEQNLSTFSSHMTNIVSIIQRATYQSLILLDELGSGTDPQ 423
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA +IL Y + + + TTHY +L + +NA+ EF+ +TL PTYR+L G
Sbjct: 424 EGAALAMAILDYFQSVGSIVLATTHYPELKVYANHAANTQNASMEFNDQTLSPTYRLLIG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNAL I+K +G II++AQ V++ E QQ +++ L +ERR++E + +
Sbjct: 484 IPGRSNALEISKRLGLRSDIIEKAQSGVQQ---ESQQL--NDMVMQLDQERREMEEEHQQ 538
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QL 543
+ L ++DE + L A+ ++ Q + K + + ++ D + QL
Sbjct: 539 TQRYLDDAQTLLDRLKDEYQQWLNAKEDLMAQAKREANQYIEAKKEEAEKIISDIRDLQL 598
Query: 544 RDASADEINS-LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
+S I E++ + + E R + V + + G++V V + +
Sbjct: 599 EQSSQQPIKEHTFIENKKRLGDLTEPERLKKN-KVLQRAKKQQRIEVGDEVEVLAYQQR- 656
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
T+VE+P + + VQ G M+++V + ++ + + P RL Q R +GS
Sbjct: 657 GTIVEIPSSKEYI-VQMGVMKMKVAASEVKLL------ESVEPQRRLNVQ---RHAGSKV 706
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 720
S+ SLDLRG R + A +L L A + ++ +IHG GTG ++
Sbjct: 707 ST---------------SLDLRGERFDAALRRLSQYLDQALLSNHPMVTIIHGKGTGALR 751
Query: 721 ERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 752
+ V + L NHP+V ++E SP N G T+ Y K
Sbjct: 752 KGVQQALANHPQVERFEY-SPPNAGGDGSTIVYFK 785
>gi|418928400|ref|ZP_13482286.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377738312|gb|EHT62321.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
Length = 782
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAKYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 R-QLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|147678274|ref|YP_001212489.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
gi|238686642|sp|A5D0W6.1|MUTS2_PELTS RecName: Full=MutS2 protein
gi|146274371|dbj|BAF60120.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
Length = 785
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 233/734 (31%), Positives = 366/734 (49%), Gaps = 87/734 (11%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLD 67
+Y L E+ L ELE KI I + D AS +L IR A + + E+L+
Sbjct: 112 QYPLLYEVSSALVSLPELERKIKNAI-LPGGEVADGASPELAQIRRRLAAAQAQVKEHLE 170
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+++ + Q + + +P++T R R V +K H+ +P GI + S+SGAT F+EP
Sbjct: 171 HIIRSPSYQKY----LQEPIVTIREGRYVVPVKIEHRSQVP-GIVHDQSASGATLFIEPM 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL +E E IL+ L+A +A+ I ++ + E+D ARA ++Q
Sbjct: 226 AVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELDFIMARARYSQK 285
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+D P+L ++ ++I +HPLL G
Sbjct: 286 LDAWAPLLEG------EACMDIRRGRHPLLQGEV-------------------------- 313
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPIDI++ + +VITGPNTGGKT ++KT GL LM+++GL++PA
Sbjct: 314 ----------VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAGEGS 363
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
RL F + ADIGD QS+EQ+LSTFS H++ IV+I+ +SLVL+DE+G+GTDP+EG
Sbjct: 364 RLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPAEGA 423
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL+ L V TTHY +L R ENA+ EF TLRPTYR+L G G
Sbjct: 424 ALAQSILEKLHSAGAKTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIGKPG 483
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
SNA IA +G ++++RA+ + E ++ E EL +SL + +++ E++ R A
Sbjct: 484 RSNAFEIAARLGLPEEVVKRARSFLTAEHIQAE-------ELMRSLEKTQQEAEAERRRA 536
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
A L +E L E DL + + +K ++ Q + A+++ + V++ ++ +
Sbjct: 537 AELASEARALKERYEKIEADLASKRESILSKAAEEAQALVRAARLEAEAAVRELREKMAE 596
Query: 546 ASADEINSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
+A E + I+E+ + + + R + +V + P GE+V + K
Sbjct: 597 EAARERENAIREAREKLRKLQQRVGRAVPEKTVPGEAPAGLRP--GEEVFLTRYNQK-GY 653
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+E PG VLVQ G +++ V P LR+ +E R +G G S
Sbjct: 654 VLEPPGAGGEVLVQVGVIKMNV------------------PLRELRRVKEARPAG--GQS 693
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ + LDLRG+ +EA +++ L A S +++IHG GTG ++
Sbjct: 694 EVAGVLLNKAREISPELDLRGLYADEALLEVEKYLDDAYLAGLSRVYLIHGKGTGSLRAA 753
Query: 723 VLEILRNHPRVAKY 736
+ L H RV +
Sbjct: 754 IHRQLSGHRRVKSF 767
>gi|418906080|ref|ZP_13460107.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377765380|gb|EHT89230.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 782
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 R-QLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|300856601|ref|YP_003781585.1| DNA mismatch repair MutS-like protein [Clostridium ljungdahlii DSM
13528]
gi|300436716|gb|ADK16483.1| DNA mismatch repair MutS related protein [Clostridium ljungdahlii
DSM 13528]
Length = 786
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 217/657 (33%), Positives = 338/657 (51%), Gaps = 81/657 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L T R R + +KA +K +P G+ + SSSGAT ++EP G V NN L E AE
Sbjct: 186 LYTMRGDRYVLPVKAENKSSVP-GLVHDQSSSGATLYIEPMGLVNLNNEIKELKLKEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+ +I + ++ D + E+D FA+A F ++G P +VS +
Sbjct: 245 IDRILAELSQQIYDNITVVERDADIIWELDFIFAKAKFGNELNGNIP------NVSENGV 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+NI +HPL+ ++ TV VP+D+ +
Sbjct: 299 VNIIEGRHPLI------------------------NKKTV-----------VPMDVYIGR 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+VITGPNTGGKT ++KT+GL +M+ +GL +PA+ + + +F + ADIGD QS+E
Sbjct: 324 NFSCLVITGPNTGGKTVTLKTIGLLHIMALSGLMIPARENSTVGFFTEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
QNLSTFS H++ IV+I+E +SLVL DE+G+GTDP+EG ALA SIL+ LR R V
Sbjct: 384 QNLSTFSSHMTNIVNIIENFDEKSLVLFDELGAGTDPTEGAALAVSILENLRKRGCTIVA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L K+ ENA+ EF +ETLRPTYR++ G G SNA I+K +G II+
Sbjct: 444 TTHYSELKVYALKNEGVENASVEFDVETLRPTYRLMIGVPGKSNAFEISKRLGLPEFIIE 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ E + + Q +L QSL E++ K E+ AR A L +E + + E++A L
Sbjct: 504 DAR---ENIASDALQF--EDLIQSLQEKKSKAETFAREAEILKSEAAKIKEKYEEKASKL 558
Query: 507 D--RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
R A + A+ ++ ++ + +K + D +++D R + ++E+ +
Sbjct: 559 QNIRDKAIIGAQ--REAKEIIRNSKEEADKILKDMRELERMGYTSSVRHKLEENRKKLKD 616
Query: 565 IVEAHRP---DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+E D+ V E S + G++V + SL K A V+ P V VQ G
Sbjct: 617 RLEKTEEKLYDNKNDVGEELKSV---KEGQEVFIPSLNQK-AVVLSKPDSKGEVQVQAGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
M++ VK +R + N+ + +L++ EA R +S S+
Sbjct: 673 MKISVKLKELR----ASSGNSKSEKKKLKR---------------EAKLNLRNVSS--SV 711
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
DLRGM EA++ +D L A + +IHG GTGV++ + ++L+ H V +
Sbjct: 712 DLRGMDSIEATYTVDKYLDDAYMGGLKEVTIIHGKGTGVLRNSITDMLKKHSHVKNH 768
>gi|417796292|ref|ZP_12443507.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443640481|ref|ZP_21124470.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
gi|334269791|gb|EGL88204.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443405162|gb|ELS63772.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
Length = 782
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 R-QLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418949118|ref|ZP_13501378.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
gi|375369683|gb|EHS73552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418925376|ref|ZP_13479278.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377744445|gb|EHT68422.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSSNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|121534235|ref|ZP_01666060.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
gi|121307338|gb|EAX48255.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
Length = 789
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 228/721 (31%), Positives = 355/721 (49%), Gaps = 89/721 (12%)
Query: 43 IILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
I+ D AS +L IR E ++R E LD +L Q + + L+T R R +
Sbjct: 147 IVRDEASVELTRIRREIRVAQQRVKEKLDQILHSAEYQKY----FQEALVTIRGDRYVIP 202
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
IK H+Y P GI + S+SGAT F+EP V NN +L +E E IL+ L++++
Sbjct: 203 IKQEHRYHFP-GIVHDQSASGATVFIEPMAVVNLNNDIKQLVAAEKNEVERILAALSSQV 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A+ I+ + V +D AFA+A M P+L+ + + + +HPL+
Sbjct: 262 ARHVDAIRQNSEIVAALDFAFAKAKLGLDMQANMPLLNDKGRIFLRQA------RHPLI- 314
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
P D VPID+++ + +++ITGPNT
Sbjct: 315 ---------------P-------------------RDEVVPIDVRLGEDFSILLITGPNT 340
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT+GL +LM++AGL++PA + +P F + ADIGD QS+EQ+LSTFS H++
Sbjct: 341 GGKTVTLKTVGLFALMTQAGLFIPAGSGSEMPVFRNVFADIGDEQSIEQSLSTFSAHMTN 400
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
+V IL VS LVLIDEIG+GTDP EG ALA +IL+YL + TTHY++L
Sbjct: 401 LVKILAKVSAHDLVLIDEIGAGTDPGEGAALAMAILEYLHSAGARTIATTHYSELKTFAY 460
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
ENA+ EF + TLRPTYR+ G G SNA I++ +G +++I RA++ +++
Sbjct: 461 SRHGIENASVEFDIHTLRPTYRLQIGIPGSSNAFAISRRLGLPQELIDRARQFLDK---- 516
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--IEDEAKDLDRRAAHLKAK 516
+ + E +++E+ +K + R A + R+ ++EA L RR + K
Sbjct: 517 --DYAQFEKILAVLEQEKKEYEERRRRAEELEAEVAALRQKLAQEEAALLARR-REIIDK 573
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDF 575
++ + A+ Q + V+ + Q AS E I ++ + + E H P+ D
Sbjct: 574 AQEEAMSIVRQARRQAEEVIARLKEQFSVASDKERQQAIADARRQLQRQMAELHHPELDA 633
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + TP G V+V +L K +V+ + D +VQ G ++V V P+
Sbjct: 634 AEKTAPPALLTP--GSTVYVTTLRQK-GSVLAI--KDGEAVVQLGVLKVNV------PVA 682
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+ PA G G S + A +VQ+ +D+RGM V EA L
Sbjct: 683 ACRIVEEMAPAGH----------GHKGVSVDFA----KVQSVSREIDVRGMTVAEAETVL 728
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYI 751
+ L A S + VIHG GTG +++ V L++HP V + + S G TV +
Sbjct: 729 EKYLDDALLAGLSEVNVIHGKGTGALRKGVRSYLKDHPHVVETRIGELSEGGDGVTVVKL 788
Query: 752 K 752
K
Sbjct: 789 K 789
>gi|417901588|ref|ZP_12545464.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
gi|341845427|gb|EGS86629.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SVKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKKKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|57651753|ref|YP_186017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus COL]
gi|87161406|ref|YP_493741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194845|ref|YP_499643.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221268|ref|YP_001332090.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509318|ref|YP_001574977.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140458|ref|ZP_03564951.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451841|ref|ZP_05699862.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|262048725|ref|ZP_06021607.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|282919921|ref|ZP_06327650.1| MutS2 protein [Staphylococcus aureus A9765]
gi|284024069|ref|ZP_06378467.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 132]
gi|294848134|ref|ZP_06788881.1| MutS2 protein [Staphylococcus aureus A9754]
gi|304381299|ref|ZP_07363952.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014337|ref|YP_005290573.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|384861738|ref|YP_005744458.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384869677|ref|YP_005752391.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781372|ref|YP_005757543.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|387142755|ref|YP_005731148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|415688463|ref|ZP_11452153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|417648497|ref|ZP_12298321.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|418282999|ref|ZP_12895756.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|418286447|ref|ZP_12899093.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|418318056|ref|ZP_12929471.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|418321588|ref|ZP_12932927.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|418570974|ref|ZP_13135228.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|418574595|ref|ZP_13138762.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|418578974|ref|ZP_13143069.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418647620|ref|ZP_13209683.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|418657820|ref|ZP_13219574.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|418875077|ref|ZP_13429339.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|418903353|ref|ZP_13457394.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418911750|ref|ZP_13465733.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|419775285|ref|ZP_14301227.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|422743467|ref|ZP_16797451.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422745626|ref|ZP_16799565.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424784971|ref|ZP_18211774.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|440708153|ref|ZP_20888828.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734591|ref|ZP_20914203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448744704|ref|ZP_21726588.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
gi|81694717|sp|Q5HGU0.1|MUTS2_STAAC RecName: Full=MutS2 protein
gi|122539777|sp|Q2FZD3.1|MUTS2_STAA8 RecName: Full=MutS2 protein
gi|123486337|sp|Q2FHT7.1|MUTS2_STAA3 RecName: Full=MutS2 protein
gi|229486380|sp|A6QG46.1|MUTS2_STAAE RecName: Full=MutS2 protein
gi|229486381|sp|A8Z1S5.1|MUTS2_STAAT RecName: Full=MutS2 protein
gi|57285939|gb|AAW38033.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus COL]
gi|87127380|gb|ABD21894.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202403|gb|ABD30213.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374068|dbj|BAF67328.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160368127|gb|ABX29098.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860449|gb|EEV83276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|259163181|gb|EEW47741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|269940638|emb|CBI49017.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282594637|gb|EFB99621.1| MutS2 protein [Staphylococcus aureus A9765]
gi|294824934|gb|EFG41356.1| MutS2 protein [Staphylococcus aureus A9754]
gi|302750967|gb|ADL65144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340282|gb|EFM06223.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196867|gb|EFU27210.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141041|gb|EFW32888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320143098|gb|EFW34888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|329313812|gb|AEB88225.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329730765|gb|EGG67144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|364522361|gb|AEW65111.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|365167155|gb|EHM58631.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|365168596|gb|EHM59934.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|365224203|gb|EHM65468.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|365244748|gb|EHM85405.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|371978726|gb|EHO95967.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|371981854|gb|EHO99015.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|374363034|gb|AEZ37139.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|375029330|gb|EHS22658.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|375039929|gb|EHS32841.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|377697001|gb|EHT21356.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377725128|gb|EHT49243.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377742368|gb|EHT66353.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377771122|gb|EHT94880.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|383970969|gb|EID87059.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|421956381|gb|EKU08710.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|436431619|gb|ELP28972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505251|gb|ELP41179.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|445562010|gb|ELY18195.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|421150022|ref|ZP_15609678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|394329412|gb|EJE55514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 378/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 R-QLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|169831532|ref|YP_001717514.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638376|gb|ACA59882.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
Length = 784
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 221/700 (31%), Positives = 350/700 (50%), Gaps = 111/700 (15%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
++A R + E L+ L++ +A Q + + +P+IT R R V +K ++ +P G+ +
Sbjct: 161 LQAGRLQVREQLERLVRSLAQQKY----LQEPIITIREGRYVVPVKIEYRNQVP-GLVHD 215
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
S+SGAT F+EP V+ NN RL +E E IL+ L+ +A++ EI +D++
Sbjct: 216 QSASGATLFIEPMAVVDKNNELRRLEAAEKQEILKILTELSTAVAQAADEILPAVDQLGH 275
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
D A+A ++ M V P+L + + F + +HPL+ G+
Sbjct: 276 FDFVLAKARLSRQMAAVPPLLEDGAFLEFSRA------RHPLIRGNV------------- 316
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
VPID +V + ++V+TGPNTGGKT ++KT+GL LM
Sbjct: 317 -----------------------VPIDGRVGRDFDLLVLTGPNTGGKTVALKTIGLLVLM 353
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++AGL++PA + + FD + ADIGD QS+E +LSTFS H++ +VDI+ V +SLVLI
Sbjct: 354 AQAGLHVPASSCA-VGLFDRVFADIGDEQSIENSLSTFSSHMANLVDIIGQVGAKSLVLI 412
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA +IL L R VVTTHY +L R ENA+ EF L+T
Sbjct: 413 DELGTGTDPTEGAALAQAILNELHRRGTRGVVTTHYGELKEFATGRDRVENASVEFDLDT 472
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
L PT+R++ G G S A IA +G I+ RA++ L PE++Q +EL + L E
Sbjct: 473 LEPTFRLVTGRPGRSYAFEIALRLGMPESIVSRAREF---LAPEQRQ--TAELLRQLEES 527
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDE-AKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
R++ E Q A E L + E E A LD++ A L+ + ++ Q+ + + + +
Sbjct: 528 RQEAERQREEARKEAREASILKQRYEAELASLLDKKTA-LRERAAREAQELIRQVRREGE 586
Query: 534 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET----------NTS 583
+V++ Q+ + E I+++ + I + A PD +V ET +
Sbjct: 587 EIVRELRRQINAGTNREKEQAIQQARARIDEL-GAGLPDP--AVPETVEGEPERLDGGEA 643
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR---PIPNSKRK 640
F P+F +Q V P D V VQ G ++V + +R P P+S
Sbjct: 644 VFIPRFSQQ-----------GVTLGPSRDGEVQVQVGSVKVNLPLAEVRRMIPAPHSTAP 692
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ----LD 696
NA ++K ++D + LDLRG+ EEA + LD
Sbjct: 693 NAGTVV--VQKTRDD---------------------VRTELDLRGLHAEEALSELEKYLD 729
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A+ R+ ++IHG+GTGV++ V L+ R+ +
Sbjct: 730 AAILAGLQRA--YIIHGLGTGVLRAAVQNHLKGDGRIRSF 767
>gi|302391195|ref|YP_003827015.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
gi|302203272|gb|ADL11950.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
Length = 801
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 232/761 (30%), Positives = 370/761 (48%), Gaps = 130/761 (17%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 84
LE KI +D + +LD AS L IR +R + L+S+L Q + I
Sbjct: 133 LERKINKAVDNQG-NVLDTASTKLRNIRRSITDYSQRIKDKLNSILSSKKYQSY----IQ 187
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
L+T R R + IK+ + + GI + S+S T F+EP V+ NN E
Sbjct: 188 DSLVTIRDKRYVIPIKSQFQEKVS-GIVHDQSASKQTVFIEPMAVVKLNNKLRSFMAEEE 246
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL+ LT E+ + IK + + +D FA+A ++ ++G P+L+ + +
Sbjct: 247 EEVYRILTELTYEVREELDRIKETLKLLAWLDFTFAKAEYSFKIEGAEPVLNQEEY---- 302
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
IN+E +HPL+ P D VPIDIK+
Sbjct: 303 --INLEKARHPLI----------------P-------------------QDEVVPIDIKL 325
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +VITGPNTGGKT ++KT+GL +LM+++GL++PA + ++ FD I DIGD QS
Sbjct: 326 GGKFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAVFDEIHGDIGDEQS 385
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ--YLRDRVG 382
+EQNLSTFS H++RI+DILE +LVL+DEIG+GTDP+EG ALA +IL+ Y R R+
Sbjct: 386 IEQNLSTFSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAMAILEELYSRGRIN 445
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY+ L + +NA+ EF +ETL+PTYR+ G G SNA IA +G
Sbjct: 446 -TIATTHYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRSNAFEIAGRLGLPT 504
Query: 443 KIIQRA----------------------QKLVERLRPERQQHRKS----ELYQSLMEERR 476
++I++A Q +VE R++ +K+ E Y++ +EE
Sbjct: 505 EVIEKARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKELKEEYETKLEEVE 564
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
KLE + + A AE + I + K ++ +K K + QQE++ AK +ID
Sbjct: 565 KLEQKIKKDAYAEAEKI-----IAESKKKVNEVVTEMKEK-AEVNQQEVDRAKSKIDEYK 618
Query: 537 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
+ ++ D +D I+++ +D V G++V +K
Sbjct: 619 YNLSSERVDLESDLKQQRIQQN-------------SEDLEV------------GDKVRLK 653
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
L +K ++E+ D + ++Q G M+V V + + + S QQ +
Sbjct: 654 KL-NKEGEIIELSEDKEEAVIQAGPMKVNVDISRLEQMDES-------------DQQTEA 699
Query: 657 QSGSAGSSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 711
+ S G +N+ + + S++ LDLRG+R EA ++D L A + S ++
Sbjct: 700 SNNSNGLNNDTNIGSLKNKKSRHISPKLDLRGLRAIEAKEKVDKYLDDAYLANISKAEIV 759
Query: 712 HGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
HG G+GV++E V ++L H ++ +Y G V +K
Sbjct: 760 HGKGSGVLREVVHDLLDEHSQIDEYRLGGKDEGGSGVTIVK 800
>gi|418598399|ref|ZP_13161909.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
gi|374399756|gb|EHQ70892.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
Length = 782
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRIETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIFNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418559141|ref|ZP_13123687.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
gi|371975432|gb|EHO92726.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
Length = 782
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418644704|ref|ZP_13206844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
gi|375025107|gb|EHS18517.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
Length = 781
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 226/758 (29%), Positives = 375/758 (49%), Gaps = 110/758 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLEHNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN-SKRKNAANPAPRLRKQQEDRQS 658
K V+E+ D++ + VQ G +++++ PI + K K P + +Q
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKNKRKVKPTKMVTRQNR---- 699
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
QT K LDLRG R E+A +LD L A + +++IHG GT
Sbjct: 700 ----------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGT 743
Query: 717 GVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G +++ V + L+ H V+ + P +G TVA +K
Sbjct: 744 GALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 781
>gi|417895692|ref|ZP_12539670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
gi|341841369|gb|EGS82830.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINKT--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|417799021|ref|ZP_12446173.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
gi|334274913|gb|EGL93219.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSIFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|255658182|ref|ZP_05403591.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
gi|260849490|gb|EEX69497.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
Length = 794
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 223/699 (31%), Positives = 343/699 (49%), Gaps = 85/699 (12%)
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
E + S+L Q F ++T R R + +K ++ P GI + S++GAT F
Sbjct: 166 ERISSILHNAEYQKF----FQDAIVTVRDERYVIPVKQEYRSRFP-GIVHDQSATGATLF 220
Query: 124 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 183
+EP VE NN +L+ +E E IL LTAEI+K ++ + ID AFA+A
Sbjct: 221 IEPMAVVELNNDVKQLTLAEQQEIQRILRHLTAEISKQSAILQENCRILGAIDFAFAKAK 280
Query: 184 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
A+ M P LS + + +HP +
Sbjct: 281 LAKDMAANRPELSREGRTDLKQA------RHPFI-------------------------- 308
Query: 244 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 303
D VPIDI++ + R+++ITGPNTGGKT SMKTLG L++++G YLP
Sbjct: 309 ---------AKDKVVPIDIRIGEDYRMLLITGPNTGGKTVSMKTLGTMVLLAQSGCYLPT 359
Query: 304 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 363
P + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V + LVL+DE+G+GTDP
Sbjct: 360 APDPVIAVYPNIYADIGDEQSIEQSLSTFSAHMTHIVRILQEVEEDDLVLLDELGAGTDP 419
Query: 364 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
EG ALA +IL+ L + TTHY++L ENA EF ++TLRPTYR+L
Sbjct: 420 EEGAALAMAILEKLLQLRVTTIATTHYSELKTFAYSREGIENACVEFDVKTLRPTYRLLI 479
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-YQSLMEERRK---LE 479
G G SNA I++ +G +I RAQ+LV + + +H +EL + +M E+R LE
Sbjct: 480 GMPGASNAFAISRRLGLSESLILRAQQLV-KADHAQFEHVINELENEKMMYEQRNADILE 538
Query: 480 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
Q R L A++ E+ + +L R+A A ++ ++E + ++++
Sbjct: 539 RQQRV-TELEAKVARTKEELSKKKGELIRKAREQSAAMVRRTRRE-------SEAIIKEL 590
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPD---DDFSVSETNTSSFTPQFGEQVHVK 596
+ Q D I+++ + + E RP + S P G+ V+VK
Sbjct: 591 KEQFDDQGIKRRQQAIQDARAKLNEAFEKSRPGIMAQKGVGKAVSLKSIKP--GDIVYVK 648
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR--KNAANPAPRLRKQQE 654
L D+ TV+EV G + T VQ G + +VK + R + ++ + K A+ PA
Sbjct: 649 KL-DQKGTVLEVQGKELT--VQIGSLHTKVKASACRFLDHAPKEPKGASVPA-------- 697
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
++ S + S+ + QT +D+RGM V+EA + L A S + +IH
Sbjct: 698 -----ASSSRRQSNSFMQKTQTIGREIDIRGMMVDEAEVVVGKFLDDAVMAGLSQVLIIH 752
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
G GTG +++ + E LR H V + Q + + G T A +
Sbjct: 753 GKGTGALRKGIHEYLRRHRNVESF-QFADITEGGTGATV 790
>gi|418312639|ref|ZP_12924148.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
gi|365238284|gb|EHM79121.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVKKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418316581|ref|ZP_12928018.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
gi|365240860|gb|EHM81619.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|253731756|ref|ZP_04865921.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724485|gb|EES93214.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418993763|ref|ZP_13541400.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
gi|377746922|gb|EHT70892.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 224/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E +
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVI 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|406981818|gb|EKE03215.1| hypothetical protein ACD_20C00234G0037 [uncultured bacterium]
Length = 790
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 220/740 (29%), Positives = 367/740 (49%), Gaps = 86/740 (11%)
Query: 9 IFHRY---SPLLELLKNCNFLTE-LEEKIGFCID--CKLLIILDRASEDLELIRAERKRN 62
F +Y +P L L+ F + LEE I D C+ ++D AS +L+ +R+ K
Sbjct: 107 FFSKYQEETPNLFLVSQNLFENKILEEDIINTFDDSCE---VVDNASPELKRLRSSYKDQ 163
Query: 63 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
NL + L + + + +P+ T R R + +K +K + GI + SSSGAT
Sbjct: 164 TYNLKNKLNSIINSAEYSKFLQEPVYTLRGDRYVIPVKIEYKSNV-QGIVHDSSSSGATL 222
Query: 123 FMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 178
F+EPK VE NN +E+++ + E IL+ L+ + +EI+Y +D + E+D
Sbjct: 223 FIEPKSIVELNNNLREIELKIDH----EIKRILAELSNRVGAQAQEIEYTLDSLAELDFI 278
Query: 179 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 238
FA+A ++ + P ++++ ++S +KHP+L+ S
Sbjct: 279 FAKAKYSILLKATEPAINTERYISLTR------VKHPILITS------------------ 314
Query: 239 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 298
+EN IS+ ++++ + ++ITG NTGGKT +KT GL LM+KAG
Sbjct: 315 IENV----------ISN-----NVEIGKDWSSLIITGSNTGGKTVILKTTGLCVLMAKAG 359
Query: 299 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 358
L++PA+ P F I ADIGD QS+ QNLSTFSGH++ I+ IL + ESLVL+DEIG
Sbjct: 360 LHIPAQEADIYP-FKNIFADIGDEQSVIQNLSTFSGHMTNIISILNQLDNESLVLLDEIG 418
Query: 359 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 418
+GTDPSEG ALA +IL+ L + +VTTHY +L L F NA+ EF +++L PT
Sbjct: 419 AGTDPSEGSALAQAILEALHKKGARTIVTTHYGELKALAYTQEGFYNASVEFDIDSLAPT 478
Query: 419 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 478
Y+++ G G SNA+ IAK++G +I AQ + Q+ E+ + L +++L
Sbjct: 479 YKLIMGLPGKSNAITIAKNLGLSAEISDNAQNIY-----ITQKDPTGEIMEGLQNTQQEL 533
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 538
A+ S E+ L E + + ++ + ++ E+ A+ +I ++++
Sbjct: 534 SRNAQKIESTKEELERLETEYNQKLEKINSEKKYALNVYKKKFDTEITKARAEIKEILEE 593
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
+ A ++ + E ES I + D + N + G V +K L
Sbjct: 594 TRRTKSEKVARRASNRLSEIESIQRNISAQDQEDLEPQYEPINWDDI--KVGSPVFIKGL 651
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
+ A ++ +P + V VQ G ++ VK + + +S K +P P+ R +
Sbjct: 652 NQE-AILLSMPDKNKNVQVQVGLLKTTVKIQKL--VKSSSIKPKEDPIPKNRANK----- 703
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ N++DLRG RVE+ ++D L A + + +++IHG GT
Sbjct: 704 -----------FKLSRTNINNTIDLRGKRVEDGLTEVDHYLDQASLANLTPVYIIHGHGT 752
Query: 717 GVVKERVLEILRNHPRVAKY 736
G ++E + + L+ P VAK+
Sbjct: 753 GALREAIRDYLKTSPYVAKF 772
>gi|374578851|ref|ZP_09651945.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
gi|374414933|gb|EHQ87368.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
Length = 788
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 220/736 (29%), Positives = 356/736 (48%), Gaps = 90/736 (12%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK- 85
LE++I CI D K + D AS +L A+ +R++ L + +++ + G K
Sbjct: 131 LEDEITRCISEDGK---VADNASPEL----ADLRRSINRLQNRIRESLEGTLRNSGYQKM 183
Query: 86 ---PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
P+IT+R R + IK ++ P GI + S+SGAT F+EP V N +
Sbjct: 184 LQDPIITQRSDRYVIPIKQEYRTSFP-GIVHDQSASGATLFIEPMPVVHLGNELREVILK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL +L+A+I EI L + + ++DL A+A + M+ P L + +
Sbjct: 243 EQREVQRILQMLSAQIEARADEIADLHEALAQLDLVVAKAHLSVTMNAGTPELVAGQQMK 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ G VP+ +
Sbjct: 303 LVQA------RHPLISGGV------------------------------------VPLSL 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ + +VITGPNTGGKT ++K +GL + M+++GL +PA++ R+ F I ADIGD
Sbjct: 321 ELGIDFDTLVITGPNTGGKTVALKVVGLMAAMNQSGLQIPAESDSRMGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I+ SLVL+DE+G+GTDP+EG ALA IL L +R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIINRADGRSLVLLDEVGAGTDPTEGAALAMGILAELHERGC 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L + R +NA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 441 RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
+++++A V ER+ ++L ++L E R++E + A + + + +E++
Sbjct: 501 RVLEKANTFV----TEREMQ-VADLIENLGETHREIELEKEKAETGRRAVEKQTKALEEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ LD L A + + + K + D ++++ + L+ + + + I+++
Sbjct: 556 SIRLDEEFELLMAMARDEANELIRGVKREADAIIEELKAALKKENKQQQD--IEKARQGF 613
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
I + + D V + + Q G+ V++ L K VV++P VLVQ G
Sbjct: 614 HRI--SAKLDHGRQVKRSGSELTADQIMLGQTVYMTKLRQK-GQVVKLPNASGEVLVQAG 670
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
M+V V P L+ QE+++ + S E + + ++
Sbjct: 671 IMKVMV------------------PLTELKLAQEEKKKVTPKYSREMGIGVRKAEEIRSE 712
Query: 681 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE- 737
+DLRGM VEE LD + A +++VIHG GTG ++ + E LR HP V +
Sbjct: 713 IDLRGMLVEEGREALDKYMDDAVLGGIGLIYVIHGKGTGAMRAGIQEFLRGHPHVRSFRL 772
Query: 738 -QESPMNYGCTVAYIK 752
+ + G TV +K
Sbjct: 773 GEYGEGDSGVTVVELK 788
>gi|387780256|ref|YP_005755054.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
gi|416839782|ref|ZP_11903140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|416847321|ref|ZP_11907055.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|323440694|gb|EGA98404.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|323442363|gb|EGA99992.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|344177358|emb|CCC87824.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|384547383|ref|YP_005736636.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|417904179|ref|ZP_12548009.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
gi|298694432|gb|ADI97654.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|341848002|gb|EGS89171.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|386830679|ref|YP_006237333.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|385196071|emb|CCG15689.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/762 (29%), Positives = 377/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEECTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSIFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|21282756|ref|NP_645844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MW2]
gi|49485982|ref|YP_043203.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|297208218|ref|ZP_06924648.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912295|ref|ZP_07129738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|418934045|ref|ZP_13487869.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987965|ref|ZP_13535638.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|448742615|ref|ZP_21724554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
gi|38604916|sp|Q8NX56.1|MUTS2_STAAW RecName: Full=MutS2 protein
gi|56749203|sp|Q6GA70.1|MUTS2_STAAS RecName: Full=MutS2 protein
gi|21204194|dbj|BAB94892.1| MutS-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244425|emb|CAG42853.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MSSA476]
gi|296886957|gb|EFH25860.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886541|gb|EFK81743.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|377719753|gb|EHT43923.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|377771825|gb|EHT95579.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|445546653|gb|ELY14940.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
Length = 782
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L +I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SVKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|375307738|ref|ZP_09773025.1| MutS2 protein [Paenibacillus sp. Aloe-11]
gi|375080069|gb|EHS58290.1| MutS2 protein [Paenibacillus sp. Aloe-11]
Length = 788
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 237/743 (31%), Positives = 367/743 (49%), Gaps = 97/743 (13%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H +P+ LL L+E LE I CID + LD AS +L IR E + R
Sbjct: 109 LHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSASTELSQIRRELRSGEVRI 167
Query: 63 MENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E LDS+++ +++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA +A+ + Y +D + +D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A+ M P+++ + ++ +HPL+ PL+
Sbjct: 282 ARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PLEQ---- 315
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++
Sbjct: 316 ---------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+DE+G+GT
Sbjct: 361 PVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G +I+ A+ V + R + SL + R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQRVEHMIASLEQNRLTAEQE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A L E+ L + E L+ + + K + + ++ A+ + + ++ D
Sbjct: 536 REKAEQLRREMEALRSRHQTELDKLESQRDRMLEKAEDEARVLVDKARSEAEKIISD--- 592
Query: 542 QLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSVSETNTSSFTPQFGEQVHV 595
LR + +E S +KE + IAA E R + + T T S G++V V
Sbjct: 593 -LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKRAATRTRSIMA--GDEVTV 647
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
SL K VVE+ G + V VQ G M+++V +++ + + A PAPR++K
Sbjct: 648 HSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL-----QPAQTPAPRVQKP--- 697
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 713
+G + ++ +N LDLRG VEEA ++D + A + + +IHG
Sbjct: 698 -VTGVKRTRDDNV---------RNELDLRGANVEEALIEVDRFMDEAFLANLGQVHIIHG 747
Query: 714 MGTGVVKERVLEILRNHPRVAKY 736
GTGV++ + E LR H V Y
Sbjct: 748 KGTGVLRTGIQEYLRKHKHVKSY 770
>gi|429736042|ref|ZP_19269961.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156327|gb|EKX98960.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
Length = 785
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 229/710 (32%), Positives = 347/710 (48%), Gaps = 105/710 (14%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R + L ++L A Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITRELHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + SSSGAT F+EP VE NN ++ + E IL L+ EIA+S
Sbjct: 200 EYRNYFP-GVIHDQSSSGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSGEIAQS 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + + EIDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 259 AAILAENCEILAEIDLIFARAGLAREMEAYQPTLNR------DGVVRLKRARHPLL---- 308
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
SK D VPIDI++ +++ITGPNTGGK
Sbjct: 309 ----------------------------SK---DKVVPIDIELGKNFSILLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L++++G +LP LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ + L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L T
Sbjct: 398 IIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQT 457
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF L+TLRPTYR+L G G SNA +I++ +G ++I+ RA+ V ++
Sbjct: 458 GVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------EE 511
Query: 462 HRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E + L +E++ E++ R EI + + E + L L K ++
Sbjct: 512 HTHFERVVNELEQEKKDYEARNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREE 571
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAH---------- 569
+ A+ + ++ ++Q D E I+E+ + + A V AH
Sbjct: 572 ANNIVREARRSAEETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPAHTVRSTPVGKP 631
Query: 570 -RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
RPDD Q G+ V++ SL + TV+ V G + + VQ G +R VK
Sbjct: 632 VRPDD-------------IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVKM 675
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ R + KRK P PR+ K + +A S + A P++ D+RGM V
Sbjct: 676 SACRFV---KRK---APKPRVEKVRI-----AASISRKAAEIRPQI-------DVRGMTV 717
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EA L I A + S + +IHG GTG +++ + E L++H V +
Sbjct: 718 SEAESVLGKFIDDAVFTGLSKILLIHGKGTGALRQGLQEYLKHHRSVLSF 767
>gi|159901402|ref|YP_001547649.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
gi|159894441|gb|ABX07521.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
Length = 806
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 245/759 (32%), Positives = 370/759 (48%), Gaps = 118/759 (15%)
Query: 10 FHRYSPLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDS 68
F PL E L N L E+E IG D + +LD AS +L +R+ + L
Sbjct: 114 FVPLHPLAEQLPNLATLEHEIERTIG--PDGE---VLDSASAELGRLRSAIRVAFNRLQE 168
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
L+ + A + +P+IT R R V +KA + L GI + SSSGAT ++EP
Sbjct: 169 RLQAIINSSQYADVLQEPIITVRDGRYVVPVKAPQRRAL-RGIVHDQSSSGATLYIEPLA 227
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE NN L +E E IL+ L+ +IA I ++ E+DLAFA+A ++ +
Sbjct: 228 TVELNNQWRELQLAEREEIQRILAALSGKIANEGMPIIVGVEATAELDLAFAKAKYSISL 287
Query: 189 DGVCPILSS---QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
P +++ + +S++++ +HPLL
Sbjct: 288 RASQPAINTPVPADDLHPESTLSLLKARHPLL---------------------------- 319
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
D VP D+ + T++++ITGPNTGGKT ++KT+GL +LM++AGL++PA
Sbjct: 320 -------NQDLVVPTDVWLGGPTQMIIITGPNTGGKTVALKTVGLMALMAQAGLHIPAHQ 372
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
RLP F I ADIGD QS+EQ+LSTFS H++ I+ IL+ V+ +SLVL DE+G+GTDP E
Sbjct: 373 GSRLPIFGKIFADIGDEQSIEQSLSTFSSHMTNIIQILDRVTPDSLVLFDELGAGTDPVE 432
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G ALA +I++ L + LA+ T+HYA+L ENA+ EF +ETL PTYR+ G
Sbjct: 433 GAALARAIIERLLNVGCLAMATSHYAELKAFAYSTDGVENASVEFDVETLSPTYRLSIGL 492
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
G SNAL IA+ +G R +I+RA+ + R + +L ++ ER ES+A A
Sbjct: 493 PGRSNALAIAERLGLKRDLIERARATI-----SRDNVQVEDLLAAIHRERTTAESEAARA 547
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
L ED DR + L E + QQ ++ + Q+D +++ +LR
Sbjct: 548 LELR----------EDAELVRDRLSRELYEFEQDREQQLASYQR-QLDDELREVRAELRR 596
Query: 546 ASADEINSL------IKESESAIAAIVE-----AHRPDDDFSVSETNTSSFTP---QFGE 591
DE S+ ++++E ++ + E P V + P Q G+
Sbjct: 597 LR-DEFRSVSVSRQWMEQAEQRLSRVAERVPQTPTPPKAKVPVVPKVALAPLPRTIQVGD 655
Query: 592 QVHVKSLGDKLATVV-EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
QV V S+ KL+ VV ++ + + VQ G R+RV + RL
Sbjct: 656 QVFVSSV--KLSGVVLDLDEEANEAEVQLGGFRLRVDLREL----------------RLE 697
Query: 651 KQQEDRQSGSAGSSNEEA--SYGPRVQTSKNS---------LDLRGMRVEEASHQLDIAL 699
K AG+S +A Y P VQ N+ LD+RG R + QLD L
Sbjct: 698 K---------AGTSPTQAVQKYVP-VQRMINTPPPPNVSMQLDMRGWRASDVESQLDHYL 747
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + S + ++HG GTG +++ V +L+ HP V Y
Sbjct: 748 NDAYLANLSEVRLVHGKGTGALRQVVRTLLKRHPLVESY 786
>gi|417891970|ref|ZP_12536027.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
gi|341851256|gb|EGS92185.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 224/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 TALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|82750751|ref|YP_416492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus RF122]
gi|123549011|sp|Q2YXD1.1|MUTS2_STAAB RecName: Full=MutS2 protein
gi|82656282|emb|CAI80696.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + + V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEHVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSCNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|296133368|ref|YP_003640615.1| MutS2 family protein [Thermincola potens JR]
gi|296031946|gb|ADG82714.1| MutS2 family protein [Thermincola potens JR]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 228/752 (30%), Positives = 365/752 (48%), Gaps = 88/752 (11%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
H+Y + +L+KN ELEEKI ID + D AS +L IR + N+ S +
Sbjct: 107 HQYPIMGDLVKNLFINKELEEKISQAIDPSGAVA-DEASPELRRIRHRIRETEINIKSKM 165
Query: 71 KKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + +Q +Q +P+IT R R V +K ++ P GI + S+SGAT F+EP A
Sbjct: 166 EGIIRSQEYQKF-FQEPIITVRGDRYVVPVKQEYRGQFP-GIIHDQSASGATLFIEPVAA 223
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN +L + E E IL+ L+A + E+ + ID A+ A M+
Sbjct: 224 VELNNELRKLYSDEEREVLRILTQLSASVKAFSEELLSDAKILGTIDFILAKGKLAHRMN 283
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI + D IN+ +HPL+ G
Sbjct: 284 ASKPIFNK------DGYINLRKCRHPLIKGHV---------------------------- 309
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPIDI + + V+VITGPNTGGKT S+KT+GL + M++AGL++P + ++
Sbjct: 310 --------VPIDIYLGRDFHVLVITGPNTGGKTVSLKTVGLTAAMAQAGLHIPCEPGSQV 361
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
P F I DIGD QS+EQ+LSTFSGH+ I+ IL V+ +LVL+DE+G+GTDP EG AL
Sbjct: 362 PVFHDIFVDIGDEQSIEQSLSTFSGHLKNIIHILAKVNESALVLLDELGAGTDPVEGAAL 421
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL+YL + V TTHY++L + ENA+ EF +TLRPTY++L G G S
Sbjct: 422 AMAILEYLYQKKARTVATTHYSELKVFAFERQGVENASVEFDSKTLRPTYKLLIGQPGRS 481
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
+A IA +G ++ RA+ + ++ + ++L + L RRK E + R A L
Sbjct: 482 SAFEIALRLGLPEALVTRARSFL-----TSEEIQVADLVEELETNRRKAEEERRKAERLR 536
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
E+ ++ R+ + + L+ R L K ++ + A+ + D +V++ +++ A+
Sbjct: 537 RELDEMRRDYAAKLEALENRRKELVEKAREEAASIVRQARKEADELVKELRRYVQEKRAE 596
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVV 606
++ + + E D+ + E + P+ GE V + ++ V+
Sbjct: 597 QLAEAEEARNR----LKELEDSKDEELMQEKAAAGEIPKGLKEGEPVFLPRF-NQTGYVL 651
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
P ++ + VQ G +++ V + + R++QE +A +
Sbjct: 652 TTPDENGQLYVQAGILKLAVHVSEV------------------RRKQEKPAVYTAPTGTG 693
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
+ G + + ++ LD+RG V+EA L+ L A + +IHG GTGV+++ V
Sbjct: 694 KLVVG-KAKEARTELDIRGKTVDEALPDLEKFLDDAYLAGLQQVQIIHGKGTGVLRKAVN 752
Query: 725 EILRNHPRVAKYEQESPMNY----GCTVAYIK 752
L H KY QE + + G V IK
Sbjct: 753 SYLAKH----KYVQEFRLGHYGEGGTGVTVIK 780
>gi|148267636|ref|YP_001246579.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH9]
gi|150393691|ref|YP_001316366.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH1]
gi|229486378|sp|A6U0W1.1|MUTS2_STAA2 RecName: Full=MutS2 protein
gi|229486379|sp|A5IS30.1|MUTS2_STAA9 RecName: Full=MutS2 protein
gi|147740705|gb|ABQ49003.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946143|gb|ABR52079.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH1]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L +I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVTEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|258423813|ref|ZP_05686699.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|418888936|ref|ZP_13443072.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846045|gb|EEV70073.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|377754446|gb|EHT78355.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 224/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|293509911|ref|ZP_06668620.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
gi|291467361|gb|EFF09878.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVALKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|379795514|ref|YP_005325512.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872504|emb|CCE58843.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 224/762 (29%), Positives = 373/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y+ L E + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYAILDEKMNQLPVLTDLFQQINET--CDTYDLYDSASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A E++ + ++V+ +D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGNVA-VEKDALLVAEQVMGHLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL + A +N+ D+E
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL------NREAVVANTIEFMEDIE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y + ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLTKQYHQYQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ +++ + VQ G +++++ PI + ++K P ++
Sbjct: 647 VLSYGQK-GEVLEIVNEEEAI-VQMGIIKMKL------PIDDLEKKQKEKVKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R Q K LDLRG R E+A +LD L A + +++IH
Sbjct: 699 NR------------------QIIKTELDLRGYRYEDALMELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418951998|ref|ZP_13504057.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
gi|375370325|gb|EHS74140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 223/757 (29%), Positives = 374/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ + + D V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 ANTIEFMEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKCVSDFRGGMPSEGGFGVTVATLK 782
>gi|7387927|sp|Q9ZEH5.1|MUTS2_STAAU RecName: Full=MutS2 protein
gi|3776110|emb|CAA11403.1| MutS-like protein [Staphylococcus aureus]
Length = 719
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 54 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 111
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 112 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 166
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 167 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 225
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 226 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 256
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 257 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 304
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 305 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 364
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 365 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 424
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 425 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 484
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 485 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 536
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 537 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 588
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 589 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 637
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 638 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 682
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 683 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 719
>gi|418563215|ref|ZP_13127657.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
gi|371971759|gb|EHO89155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
Length = 782
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNIQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418655590|ref|ZP_13217441.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
gi|375036341|gb|EHS29416.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
Length = 782
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSIFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKYSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|386728823|ref|YP_006195206.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
71193]
gi|387602416|ref|YP_005733937.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478481|ref|YP_006709911.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
gi|418309746|ref|ZP_12921297.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|418978614|ref|ZP_13526414.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|283470354|emb|CAQ49565.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237869|gb|EHM78708.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|379993438|gb|EIA14884.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|384230116|gb|AFH69363.1| MutS [Staphylococcus aureus subsp. aureus 71193]
gi|404439970|gb|AFR73163.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
Length = 782
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKRADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRVGMPSEGGFGVTVATLK 782
>gi|253317073|ref|ZP_04840286.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|257795126|ref|ZP_05644105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|258407166|ref|ZP_05680315.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|258421743|ref|ZP_05684664.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|258432913|ref|ZP_05688602.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|258443403|ref|ZP_05691746.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|258446076|ref|ZP_05694238.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|258449811|ref|ZP_05697909.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|258454910|ref|ZP_05702873.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|269202756|ref|YP_003282025.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282894171|ref|ZP_06302402.1| MutS2 protein [Staphylococcus aureus A8117]
gi|282928666|ref|ZP_06336263.1| MutS2 protein [Staphylococcus aureus A10102]
gi|295405948|ref|ZP_06815757.1| MutS2 protein [Staphylococcus aureus A8819]
gi|296275631|ref|ZP_06858138.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MR1]
gi|297246508|ref|ZP_06930346.1| MutS2 protein [Staphylococcus aureus A8796]
gi|384864370|ref|YP_005749729.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150285|ref|YP_005741849.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|415694454|ref|ZP_11455905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|417652169|ref|ZP_12301922.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417801420|ref|ZP_12448510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|417894614|ref|ZP_12538628.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|418424284|ref|ZP_12997408.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|418427274|ref|ZP_13000288.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|418430119|ref|ZP_13003036.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433078|ref|ZP_13005860.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|418436753|ref|ZP_13008557.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|418439625|ref|ZP_13011334.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|418442676|ref|ZP_13014279.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|418445736|ref|ZP_13017214.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|418448680|ref|ZP_13020074.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|418451504|ref|ZP_13022839.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|418454561|ref|ZP_13025824.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457435|ref|ZP_13028640.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568086|ref|ZP_13132440.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|418638918|ref|ZP_13201191.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|418653778|ref|ZP_13215707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|418663441|ref|ZP_13224959.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|418877992|ref|ZP_13432227.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880818|ref|ZP_13435037.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883745|ref|ZP_13437942.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886403|ref|ZP_13440552.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418894761|ref|ZP_13448858.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418914239|ref|ZP_13468211.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920218|ref|ZP_13474151.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931206|ref|ZP_13485048.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418991004|ref|ZP_13538665.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|419785786|ref|ZP_14311533.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|424777696|ref|ZP_18204655.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|443635753|ref|ZP_21119875.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
gi|257789098|gb|EEV27438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|257841321|gb|EEV65766.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|257842076|gb|EEV66504.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|257849353|gb|EEV73330.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|257851493|gb|EEV75432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|257855134|gb|EEV78075.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|257856731|gb|EEV79634.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|257862790|gb|EEV85555.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|262075046|gb|ACY11019.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282589705|gb|EFB94791.1| MutS2 protein [Staphylococcus aureus A10102]
gi|282763657|gb|EFC03786.1| MutS2 protein [Staphylococcus aureus A8117]
gi|285816824|gb|ADC37311.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|294969383|gb|EFG45403.1| MutS2 protein [Staphylococcus aureus A8819]
gi|297176614|gb|EFH35877.1| MutS2 protein [Staphylococcus aureus A8796]
gi|312829537|emb|CBX34379.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128541|gb|EFT84546.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|329725189|gb|EGG61678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334276778|gb|EGL95028.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|341851798|gb|EGS92707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|371980768|gb|EHO97969.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|375017989|gb|EHS11584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|375019967|gb|EHS13510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|375034089|gb|EHS27264.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|377694114|gb|EHT18479.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695625|gb|EHT19985.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377715039|gb|EHT39236.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377715479|gb|EHT39669.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377723126|gb|EHT47251.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377726585|gb|EHT50696.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731711|gb|EHT55764.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377757741|gb|EHT81629.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377765577|gb|EHT89426.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|383361993|gb|EID39352.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|387719184|gb|EIK07136.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719344|gb|EIK07293.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|387720694|gb|EIK08597.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|387725944|gb|EIK13535.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|387728283|gb|EIK15776.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|387730846|gb|EIK18199.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|387736228|gb|EIK23329.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|387737623|gb|EIK24685.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|387738356|gb|EIK25400.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|387745329|gb|EIK32088.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|387746022|gb|EIK32767.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|387747993|gb|EIK34692.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346376|gb|EJU81466.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|408423364|emb|CCJ10775.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408425354|emb|CCJ12741.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408427342|emb|CCJ14705.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408429329|emb|CCJ26494.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408431317|emb|CCJ18632.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408433311|emb|CCJ20596.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408435302|emb|CCJ22562.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408437287|emb|CCJ24530.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|443408812|gb|ELS67323.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
Length = 782
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L +I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418280914|ref|ZP_12893736.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
gi|365167015|gb|EHM58492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
Length = 782
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 377/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPISKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|257425195|ref|ZP_05601621.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257427858|ref|ZP_05604256.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257430493|ref|ZP_05606875.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433255|ref|ZP_05609613.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436094|ref|ZP_05612141.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282910719|ref|ZP_06318522.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913919|ref|ZP_06321706.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282918842|ref|ZP_06326577.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282923964|ref|ZP_06331640.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|293526498|ref|ZP_06671183.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|417889008|ref|ZP_12533107.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
gi|257272171|gb|EEV04303.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257274699|gb|EEV06186.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278621|gb|EEV09240.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281348|gb|EEV11485.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257284376|gb|EEV14496.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313936|gb|EFB44328.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|282316652|gb|EFB47026.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282321987|gb|EFB52311.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282325324|gb|EFB55633.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|290920570|gb|EFD97633.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|341853076|gb|EGS93958.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
Length = 782
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|407473381|ref|YP_006787781.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407049889|gb|AFS77934.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 792
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 229/753 (30%), Positives = 371/753 (49%), Gaps = 93/753 (12%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+LE L+ + N E+E+ I F I D AS +L IR + + +N+ + L +
Sbjct: 118 PILESLIGDLNSYREIEDNI-FNAIVSEEEISDNASSNLRNIRKQIQIKNDNIRTKLNSI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ +IT R R V +K ++ + P G+ + SSSGAT F+EP V N
Sbjct: 177 INSSTNKKYLQDAIITIRSERYVVPVKQEYRSIFP-GLIHDQSSSGATLFIEPMAIVNLN 235
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L +E E IL+ L+ + + I+ + +ID FA+ + M+G P
Sbjct: 236 NELKELKLNEKKEIEKILTELSEMVGEENEGIRSNQKILSQIDFIFAKGKLSLDMNGSKP 295
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++++ + INI+ +HPLL G+
Sbjct: 296 NINNRGY------INIKKGRHPLL----------------------------------GV 315
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
D VP DI + ++ITGPNTGGKT ++KT+GL +LM ++GL +P ++ + F+
Sbjct: 316 KDV-VPTDIYLGDNFTTLLITGPNTGGKTVTLKTVGLFTLMMQSGLQVPVEHGTEMAVFE 374
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H++ IVDIL + SLVL DE+G+GTDP+EG ALA SI
Sbjct: 375 NIFADIGDEQSIEQSLSTFSSHMTNIVDILNNLDDNSLVLFDELGAGTDPTEGAALAMSI 434
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L YL +R V TTHY++L ENA+ EF++ETL PTYR+L G G SNA
Sbjct: 435 LDYLYNRKIRTVATTHYSELKVYALTTEGIENASVEFNVETLSPTYRLLIGVPGKSNAFE 494
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
I+K +G II A++ + ++ ++ S+ ++R + E A L E+
Sbjct: 495 ISKRLGLQDFIIDSAKEFI-----SKENIAFEDVLASIEKDRIETEKNREEANRLRREVN 549
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD---E 550
L E+E++ ++ + + ++ + L A+ + + ++ N+L++ S + E
Sbjct: 550 QLKEELEEKTLKIENNREKILREAREEARNVLLKARAESEEIL----NELKEVSIEIEKE 605
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVV 606
+ ++E++ + ++ + D S + S P GE V + SL ++ TV+
Sbjct: 606 QSRRLQEAKEKLKGNID--NIEGDLSEQILSKKSAKPLASVDIGENVKILSL-NQTGTVL 662
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
P ++ VLVQ G M++ V + I + +K+ + + GSA S +
Sbjct: 663 SAPDENGNVLVQVGIMKITVPLDTIE---------------KSKKESKVQTKGSAKSVIK 707
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
S K+ LDLRG +EEA ++D L A V+ +IHG GTG+++E +
Sbjct: 708 SKSV-----NVKSDLDLRGQNLEEAMLEVDKFLDDAYLAGLKVVNIIHGKGTGILREGIG 762
Query: 725 EILRNH-----PRVAKYEQESPMNYGCTVAYIK 752
++L+ H R+ Y + G TV IK
Sbjct: 763 QLLKRHRHVKASRLGNYGEGGT---GVTVVEIK 792
>gi|269926462|ref|YP_003323085.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790122|gb|ACZ42263.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 794
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 231/738 (31%), Positives = 360/738 (48%), Gaps = 99/738 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDS 68
+S L L++ L++L ++I ID + + D AS L IR++ + R M++L+S
Sbjct: 118 FSLLSAQLRHIVDLSDLRKQIDAAIDDQAQV-RDSASTTLARIRSQLRSAHDRLMQHLNS 176
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
L+ + + + +P+IT+R R V ++A ++ +P GI +VS SG T F+EP
Sbjct: 177 LISSSSYR----DALQEPIITQRDGRYVVPVRADARHRIP-GIVHDVSGSGQTLFVEPLA 231
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
V+ N L E E IL+ L+ +A +I + + +D A A+A F+Q +
Sbjct: 232 TVDMGNRITELRRQESEEIERILAQLSEAVASVASDIMRTLLALARLDFALAKAKFSQHL 291
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
P L S + + + +HPLL DV
Sbjct: 292 HACEPELVSAEYEG--DKLFLPDARHPLL------------------GRDV--------- 322
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPI I + + RV+VITGPNTGGKT ++KT GL SLM+ +GL+LP R
Sbjct: 323 ---------VPITIFLGGDFRVLVITGPNTGGKTVALKTTGLLSLMALSGLHLPTSERAR 373
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+P ILADIGD QS+EQ+LSTFS H+ I +LE+ ++L+L+DE+G+GTDP EG A
Sbjct: 374 VPVLKYILADIGDEQSIEQSLSTFSSHVINIKKMLEVAGPDTLLLLDELGAGTDPEEGAA 433
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
+A +I+ YL ++ L V TTHY ++ NAA EF LETL PTYR+ G G
Sbjct: 434 IAEAIIDYLLEKRALVVATTHYPEIKVYAQTTPGVTNAAVEFDLETLSPTYRLTIGLPGR 493
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
S A++IA+ +G + +I+ A+ R+ PE S L+E+ +E++ + A
Sbjct: 494 SYAIDIAQRLGLPKVVIEAAKS---RVSPE------SRAANDLLEQ---IEAEKKLADQR 541
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKE---TQQVQQELNFAKVQIDTVVQDFENQLRD 545
AE + RE E+ R AA L+ E Q +++ A +++ V ++ + R
Sbjct: 542 LAEAEQIRREAEELRS---RAAAELQEAERIREQALEEGYQQALRELEDVRREIDEVRRR 598
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLA 603
SA + S + E A+ A+ R + S PQ G+ V +KS G +
Sbjct: 599 LSASQAASKLGEIADALRAVENVERRVRKSTRGSKRPSVIRRLPQVGDSVRIKSFGTE-G 657
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
V+ + D T VQ G +R RV +++ + + S +
Sbjct: 658 KVLSI--SDSTAEVQVGSLRSRVPLSDLEVVGGKQ---------------------STET 694
Query: 664 SNEEASYGPRVQTS-----KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S++ + G R+ LDLRGMR EEA +LD L A + +IHG GT
Sbjct: 695 SSQTRTRGVRLNVDVRANISTELDLRGMRAEEALSKLDEYLNDAYIQGIPTARIIHGYGT 754
Query: 717 GVVKERVLEILRNHPRVA 734
G +++ V +L+ HP V+
Sbjct: 755 GALRDAVRSMLQGHPLVS 772
>gi|226311231|ref|YP_002771125.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
gi|254766594|sp|C0Z9F1.1|MUTS2_BREBN RecName: Full=MutS2 protein
gi|226094179|dbj|BAH42621.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
Length = 785
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 220/721 (30%), Positives = 357/721 (49%), Gaps = 91/721 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L ELE +I C+D ILD AS +L +R E + L+S +++ Q+ ++ K
Sbjct: 128 LRELETEIRRCVDENG-DILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQK 182
Query: 86 PL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
L +T R R + +K ++ + GI + S+SGAT F+EP+ VE NN L
Sbjct: 183 MLMENIVTIRGDRFVIPVKQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRL 241
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT +++ + + + + E+D FA+A A M +CP ++ + +V
Sbjct: 242 REEREVERILYVLTEQVSFAVEALVENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV 301
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
N+ +HPL+ P + VP+D
Sbjct: 302 ------NMRKARHPLI----------------P-------------------REVVVPVD 320
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ E + +V+TGPNTGGKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD
Sbjct: 321 VELGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGD 380
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ I+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D
Sbjct: 381 EQSIEQSLSTFSSHMTNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSG 440
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY++L NA+ EF ++TLRPTYR+L G G SNA IA+ +G
Sbjct: 441 ARLVATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLP 500
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II V R + ++ + SL R+ E+ A + E +L ++E+
Sbjct: 501 EHIID-----VARGSISEEDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEE 555
Query: 502 EAKDLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKE 557
E A K K ++ + E + AK + +T++++ + + + + LI
Sbjct: 556 ERAQF----AEEKNKRMERAEDEARIAVQLAKEEAETIIRELREMMAEGMEIKEHRLIDA 611
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+ A++E + + + G++V V S G K TV+E +++ LV
Sbjct: 612 KKRLGNAVLELEKEKVKKPAKAVRATQI--KVGDEVMVTSFGQK-GTVLEKVNNEE-FLV 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G M+++VK++++ + ++K A P +++ R
Sbjct: 668 QIGIMKMKVKRDDMHVQNSIQQKPQAAPYTSVKR---------------------RSDNI 706
Query: 678 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
K LDLRG VE++ ++D L A + +IHG GTGV+++ V E LR+H V
Sbjct: 707 KMDLDLRGYNVEDSIREIDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYLRSHRNVKS 766
Query: 736 Y 736
+
Sbjct: 767 F 767
>gi|410658584|ref|YP_006910955.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|410661571|ref|YP_006913942.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
gi|409020939|gb|AFV02970.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|409023927|gb|AFV05957.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
Length = 796
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 222/724 (30%), Positives = 356/724 (49%), Gaps = 128/724 (17%)
Query: 44 ILDRASEDLELIRAER----KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRASE+L +R + +R E+LD +L+ + Q + +IT R R V I
Sbjct: 152 INDRASEELARLRKAKGISQQRIKESLDGILRNPSYQKM----LQDNVITSRGDRYVVPI 207
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K + P GI + S+SGAT F+EP V+ N ++ E E IL LTA++
Sbjct: 208 KMEYSSAFP-GIVHDQSASGATLFIEPMAVVQLGNELREITLKENREVQKILQQLTAKVT 266
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
EI L + ++++D A+A ++ M+ P++ ++ V + G +HPLL G
Sbjct: 267 ARIPEILLLNEALIKLDFILAKARLSEDMEAGSPLVMNKQEV------KLIGARHPLLTG 320
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
P+ VPI + + + + ++ITGPNTG
Sbjct: 321 --------------PV----------------------VPISVGLGMDDQFLIITGPNTG 344
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL ++M ++GL++PA++ RL F I DIGD QS+EQ+LSTFS H++ I
Sbjct: 345 GKTVTLKTIGLMAVMMQSGLHIPAESDSRLGIFTRIFVDIGDEQSVEQSLSTFSAHMTNI 404
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDI SLVL+DE+G+GTDP EG ALA +IL L +R V TTHY L
Sbjct: 405 VDITREADSRSLVLLDELGAGTDPGEGAALAMAILAELLERGSCGVATTHYGALKTFAYN 464
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF+ ETL+PTYR+L G G SNAL IA+ +G I+++A+ +
Sbjct: 465 TPGVENASVEFNPETLKPTYRLLTGIPGRSNALAIAQRLGLGSSILEKARSFI-----SE 519
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ ++S+L ++L + +R++E + R+ +E+E K + +AA LK K
Sbjct: 520 RDTKESDLLENLEDTQREIELKKRS--------------VEEEQKKAEHKAAELKKK--- 562
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDFS 576
++++ +D + ++ + D + E+E I I EA R + + +
Sbjct: 563 ---------NLELEEKYEDIMRKAKEEAVDVVRQARLEAEGIIKEIKEAQKKERREQEAA 613
Query: 577 VSET-------------------NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDT 614
+ +T N S P + G+ V++ +L K V++ P +++
Sbjct: 614 LEKTRQGLKKLSEKVYETEYTGKNKSGPKPGQVEPGQTVYMPNLRQK-GQVLQKPDNNNE 672
Query: 615 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 674
VLVQ G ++V V + IR + +++ P + Q G+ G S +
Sbjct: 673 VLVQTGILKVSVPLSEIRLVDETRK-----PEHFAKTIQ-----GTFGLS--------KA 714
Query: 675 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++ +DLRG VEE LD L A + + VIHG GTG ++ + + L+ HP
Sbjct: 715 VNLRSEIDLRGKLVEEGILMLDKYLDDAVITGINQVSVIHGKGTGALRAGIHQFLKRHPH 774
Query: 733 VAKY 736
VA Y
Sbjct: 775 VAAY 778
>gi|435854741|ref|YP_007316060.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
gi|433671152|gb|AGB41967.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
Length = 788
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 231/757 (30%), Positives = 371/757 (49%), Gaps = 101/757 (13%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENL 66
+ Y +L++ + LE+KI +D + I D AS L IR R L
Sbjct: 114 NEYVRILKISSQIETFSNLEQKIRKAVDNQGQI-KDSASSKLADLRRKIRNTSDRIKNKL 172
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
+S+L Q + I + ++T R R + +KA+ + P GI + S+SG T F+EP
Sbjct: 173 NSILNSNRYQSY----IQESVVTIRDQRYVIPVKAAKQSDFP-GIIHDKSASGQTVFIEP 227
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
VE NN +L + E E IL L+ E+ K + IK + + +D FA+A ++
Sbjct: 228 MPVVEINNKLQQLRSEEEEEIKRILQELSIEVEKRLQPIKETIKVLAVLDFIFAKAKYSI 287
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
++ PIL+S+ IN+ +HPLL DV
Sbjct: 288 ELEASEPILNSKGQ------INLIKARHPLLT------------------EDV------- 316
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VPID+++ +VITGPNTGGKT S+KT+GL ++M +AGL++PA +
Sbjct: 317 -----------VPIDVQLGDNFASLVITGPNTGGKTVSLKTIGLLTIMGQAGLHVPALSG 365
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + ADIGD QS+EQNLSTFS H+++I+ I+E S SLVL+DE+G+GTDP EG
Sbjct: 366 SKLAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASINSLVLLDELGAGTDPVEG 425
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA IL YL + V TTHY++L ENA+ EF +ETL PTY + G
Sbjct: 426 SALARGILDYLHQQGAKTVATTHYSELKTYAYNQDGVENASVEFDVETLAPTYNLQMGLP 485
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA IA +G +II +A + +++ E + + + E++R+ + + +A
Sbjct: 486 GRSNAFQIASRLGLSDEIIDKASQFLDQEDIEL-----DNIIKQIEEDKREYQQKKESAQ 540
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN----FAKVQIDTVVQDF--E 540
+ +L E E + K L+ + K +E ++ +E N A+ + + ++ + +
Sbjct: 541 ENKRQARELREEYEAKLKKLEAQ----KEREMKEAYREANKIIKRAQQKANKIIDELKEQ 596
Query: 541 NQLRDASADEINSLIKESESAIA----AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
QL D + S ++E + ++EA R + + G++V +
Sbjct: 597 RQLNDRKIEGARSELREERKDLKEERQELIEAKREQKEVP---------DIKVGDKVKLS 647
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
+L K V+E+ + LVQ G M+V V ++R + + ++ N R+
Sbjct: 648 NLNQK-GKVLEIHSGKEEALVQAGIMKVTV---DLRELEKTTIESKTNNNTRV------- 696
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
+ S SN+ + P LDLRG+RV EA ++LD L A + + + +IHG
Sbjct: 697 -NISQVKSNKAKNISP-------ELDLRGLRVVEAKNKLDKYLDDALLANLNQVEIIHGK 748
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
GTG ++E V E+L+N+ + Y P G V +
Sbjct: 749 GTGTLREVVDEMLKNYRNIKDYRLGRPKEGGTGVTIV 785
>gi|374322955|ref|YP_005076084.1| MutS2 protein [Paenibacillus terrae HPL-003]
gi|357201964|gb|AET59861.1| MutS2 protein [Paenibacillus terrae HPL-003]
Length = 789
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 234/744 (31%), Positives = 363/744 (48%), Gaps = 98/744 (13%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H +P+ LL L+E LE I CID + LD AS +L IR E + R
Sbjct: 109 LHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSASTELSQIRRELRSGEVRI 167
Query: 63 MENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E LDS+++ +++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA +A+ + Y +D + +D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDVLGTLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A+ M P+++ + ++ +HPL+ PL+
Sbjct: 282 ARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PLEQ---- 315
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++
Sbjct: 316 ---------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+DE+G+GT
Sbjct: 361 PVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAVSILEHMHALGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G +I+ A+ V + R + SL + R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRVEHMIASLEQNRLTAEQE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A L E+ +L ++E + L+ + L K + + ++ A+ + + ++ D
Sbjct: 536 REKAEQLRGEMEELRTRHQNELEKLEAQRERLLEKAADEARSLVDKARSEAEIIIADLRK 595
Query: 542 --QLRDASADEINSL-----IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVH 594
Q AS E + + E+E RP + T T S G++V
Sbjct: 596 LAQEEGASVKEHRLIAARKELDEAEPKQRKKSAVKRP------AATRTRSIVA--GDEVS 647
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V SL K VVE+ G + V VQ G M+++V +++ + + A APR +K
Sbjct: 648 VHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL-----QPAQTTAPRAQKP-- 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+G + ++ +N LDLRG VEEA ++D + A + + +IH
Sbjct: 699 --VTGIKRTRDDNV---------RNELDLRGANVEEALMEVDRFMDEAFLANLGQVHIIH 747
Query: 713 GMGTGVVKERVLEILRNHPRVAKY 736
G GTGV++ + E LR H V Y
Sbjct: 748 GKGTGVLRTGIQEYLRKHKHVKSY 771
>gi|334138498|ref|ZP_08511917.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
gi|333604147|gb|EGL15542.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
Length = 825
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 226/741 (30%), Positives = 363/741 (48%), Gaps = 105/741 (14%)
Query: 15 PLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLD 67
P+ LL L++ E++I CID ++D AS +L +R+E + R E L+
Sbjct: 153 PVPMLLSWAELLSDNKDTEDRIKSCIDDNA-AVMDSASGELSRVRSELRTGEARVREKLE 211
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+++ + Q + L+T R R + +K ++ G+ + S+SGAT F+EP+
Sbjct: 212 QMIRNPSVQKM----LQDALVTMRGDRYVIPVKQEYRSSF-GGMIHDQSASGATLFIEPE 266
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN L E AE IL +LT+++A+ E ++ ++ + ++D FA+AG A+
Sbjct: 267 AVVTLNNRIRELKFKEEAEVEKILRMLTSQVAEIEEDLLSDVELLAQLDFTFAKAGLARE 326
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
M P L+ + + + +HPL+ PL
Sbjct: 327 MKATLPKLNDRGFLKLKRA------RHPLI----------------PL------------ 352
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
D VPID+++ +++TGPNTGGKT S+KT+GL SLM+ +GL++PA+
Sbjct: 353 -------DKVVPIDLELGGSFTTIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPAEEGS 405
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
L FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG
Sbjct: 406 ELCVFDGIFADIGDEQSIEQSLSTFSSHMTNIIGILRDMTPKSLVLLDELGAGTDPAEGS 465
Query: 368 ALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA S+L+ + R+G ++ TTHY++L + NA+ EF ++TL PTYR+L G
Sbjct: 466 ALAISLLENIH-RMGCRMIATTHYSELKAYAFERRGVINASMEFDVQTLSPTYRLLVGVP 524
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA IA+ +G R II +A+ V + R + SL E R E++ +A
Sbjct: 525 GRSNAFAIAERLGLPRAIIDKARGQV-----SDEDQRVETMIASLEENRLTAEAERHSAE 579
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+ E +L + E LD + + K ++ Q + A+ + + ++ D
Sbjct: 580 QIRRENEELRAALSAERAKLDEQRDKVLLKAEREAQDAIAKARREAEEIIAD-------- 631
Query: 547 SADEINSLIKESESAIA--AIVEAHRPDDDFSVSETNTSSFTPQF-------GEQVHVKS 597
+ L KE AI ++ A R D+ + P+ G++V V S
Sbjct: 632 ----LRRLAKEEAGAIKDHKLIAARRRLDEAEPKLRKPGAKRPERSKAEVEPGDEVRVVS 687
Query: 598 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 657
LG K VVE+ + V VQ G M+++V K ++ I S +K K+ D
Sbjct: 688 LGQK-GHVVEIVNSSE-VTVQLGIMKMKVNKTDLEVIKASPQKKPVQQVAATVKRTRD-- 743
Query: 658 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 715
+ +DLRG VEE +LD L + + + ++VIHG G
Sbjct: 744 -----------------DNIRMEVDLRGTNVEEGIMELDRFLDESFLNNFAQVYVIHGKG 786
Query: 716 TGVVKERVLEILRNHPRVAKY 736
TGV++ + + LR H V +
Sbjct: 787 TGVLRTGIQDYLRRHKHVKSF 807
>gi|402570749|ref|YP_006620092.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
gi|402251946|gb|AFQ42221.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
Length = 787
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 221/734 (30%), Positives = 355/734 (48%), Gaps = 87/734 (11%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGG 82
LE++I CI D K + D A+ +L R + R E+L++ L+ + Q
Sbjct: 131 LEDEITRCISEDGK---VADNATPELADFRRAINRLQNRIRESLEATLRNPSYQKI---- 183
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ P+IT+R R + +K ++ P GI + S+SGAT F+EP V N +
Sbjct: 184 LQDPIITQRSDRYVIPVKQEYRASFP-GIVHDQSASGATLFIEPMPVVHLGNELREVILK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL +L+A+I EI L + + ++DL A+A + M+ P L + +
Sbjct: 243 EQREVQRILQMLSAQIEGRGDEIADLHEALAQLDLVIAKAHLSVSMNAGAPELVAGQQIK 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL IS VP+ +
Sbjct: 303 LVQA------RHPL------------------------------------ISGRVVPLSL 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ E +VITGPNTGGKT ++K +GL + M+++GL +PA++ R+ F I ADIGD
Sbjct: 321 ELGIEFDTLVITGPNTGGKTVALKVVGLMAAMNQSGLQIPAESDSRMGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I++ SLVL+DE+G+GTDP+EG ALA IL L +R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIIDRSDGRSLVLLDEVGAGTDPTEGAALAMGILAELHERGC 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L + R +NA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 441 RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
+++++A V ER+ ++L ++L E R++E + + A + + + +E++
Sbjct: 501 EVLEKANTFV----TEREMQ-VADLIENLGETHREIEIEKQKAETGRQAVEKQTKALEEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ LD L A + + + AK + + ++ + + LR + + + I+++
Sbjct: 556 SIRLDEELEILVALAKDEASEIIREAKREAEAIIDELKAALRKENKQQQD--IEKARQGF 613
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
I S + S+ G+ V++ L K V+++P +D VL+Q G M
Sbjct: 614 RKISAKLDQGRQVKRSGSELSADQIMLGQTVYMTKLRQK-GQVIKLPNSNDEVLIQAGIM 672
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
+V V + ++ K+ PR RQ G EE ++ +D
Sbjct: 673 KVMVPLSELKLAQEEKK-----AMPRY-----SRQMGIGVRKAEEI---------RSEID 713
Query: 683 LRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--Q 738
LRGM VEE LD + A +++VIHG GTG ++ + E L+ HP V + +
Sbjct: 714 LRGMLVEEGREALDKYMDDAVLGGIGLIYVIHGKGTGAMRTGIQEFLKGHPHVRSFRLGE 773
Query: 739 ESPMNYGCTVAYIK 752
+ G TV +K
Sbjct: 774 YGEGDSGVTVVELK 787
>gi|15924134|ref|NP_371668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926728|ref|NP_374261.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus N315]
gi|156979466|ref|YP_001441725.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005930|ref|ZP_05144531.2| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|54037877|sp|P65496.1|MUTS2_STAAN RecName: Full=MutS2 protein
gi|54041518|sp|P65495.1|MUTS2_STAAM RecName: Full=MutS2 protein
gi|229486377|sp|A7X169.1|MUTS2_STAA1 RecName: Full=MutS2 protein
gi|13700944|dbj|BAB42240.1| MutS-like protein [Staphylococcus aureus subsp. aureus N315]
gi|14246914|dbj|BAB57306.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721601|dbj|BAF78018.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 782
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 224/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L +I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ +L+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERVLTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|253733620|ref|ZP_04867785.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728419|gb|EES97148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
Length = 782
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 225/762 (29%), Positives = 375/762 (49%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D
Sbjct: 543 RLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
QLR+ + +KE E I + R DD + + ++ G++V
Sbjct: 596 -RQLREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ D++ + VQ G +++++ ++ K+K P + +Q
Sbjct: 647 VLSYGQK-GEVLEIVNDEEAI-VQMGIIKMKLSIEDLE----KKQKEKVKPTKMVTRQNR 700
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
QT K LDLRG R E+A +LD L A + +++IH
Sbjct: 701 --------------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|317473450|ref|ZP_07932744.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899100|gb|EFV21120.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 799
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 220/711 (30%), Positives = 345/711 (48%), Gaps = 91/711 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR K + + S L + + + L+T R R C+ +K +
Sbjct: 145 ISDDASSALKDIRRNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ G+ + SSSG+T F+EP V NN L E E IL+LL+ + +
Sbjct: 205 RGQFK-GMIHDQSSSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILALLSEQASYDMD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++++D FA+A +A+ +G PI D INI+ +HPLL
Sbjct: 264 SLAQNQKLLVQLDFIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K VPI++ + ++VITGPNTGGKT
Sbjct: 312 ---------DPKK--------------------VVPINVSLGDAFSMLVITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I+
Sbjct: 343 SLKTVGLFTLMGQAGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSII 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ R+SLVL+DE+ GTDP EG ALA SIL L DR + TTHY++L
Sbjct: 403 QNAHRDSLVLLDELCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTNGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++ +
Sbjct: 463 ENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDNHIIEHASDQIDESVKD----- 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++++ + LE +T EI + +EIE K L R ++K K + +++
Sbjct: 518 ----FETILAD---LEKSKQTIEQEQEEIFEYRKEIETLRKSLKERQENIKEKREKLLRE 570
Query: 524 E-------LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ AK D ++++ N+L+ S + N ++ S + + D +
Sbjct: 571 AREEAYRIISEAKETADETIKEY-NKLKKQSGKDANRKMEHMRSDLRGKMSGLEKDMAYR 629
Query: 577 VSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI-- 631
+ P Q G++V+V SL TV +P + VQ G MR ++ ++
Sbjct: 630 SKNRASKKHEPGDFQIGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKINVKDLEI 688
Query: 632 -RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
+ + KR+NA N A R SG + N+ +S P + ++ GM V+E
Sbjct: 689 TKSVKQVKRENARNEA---------RNSGRT-AINKSSSIRPEI-------NVLGMTVDE 731
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 736
A LD I AC + + VIHG GTG +++ V L+ L+ R++ Y
Sbjct: 732 AVSHLDKFIDDACLANLGQITVIHGKGTGALRKGVHNYLKTLKKQKRISGY 782
>gi|384867975|ref|YP_005748171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|312438480|gb|ADQ77551.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
Length = 782
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D + + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDKEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|254526388|ref|ZP_05138440.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
gi|221537812|gb|EEE40265.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
Length = 803
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 226/726 (31%), Positives = 359/726 (49%), Gaps = 97/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL-------ITKRRSRMC 96
I D AS +L ++R E L KK+ +I I K L I R R
Sbjct: 158 ISDNASNELSILRKEL---------LSKKLERKILVEKFIQKNLAYLQDTTIGDRNGRPV 208
Query: 97 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 156
+ +K ++ + GI + SSSG T + EP+ V N L IAEE +L +
Sbjct: 209 LAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARIIAEEFKLLKKWSQ 267
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
++ + + + +L ++ A R+ +++W+ G P +S + G HPL
Sbjct: 268 IVSDNSENLIEMSSILLRLENALTRSRYSKWIGGKTPTFEKNPIIS------LVGFSHPL 321
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
L+ + + PV +D + +VV ITGP
Sbjct: 322 LIWEHKKKGAPP----------------------------PVAVDFHINRNIKVVAITGP 353
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+NLSTFSGHI
Sbjct: 354 NTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSGHI 413
Query: 337 SRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
SRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ + + TTHY D+
Sbjct: 414 SRIKEILDSLNNKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDITLATTHYGDI 473
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I+ A
Sbjct: 474 KALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENILNEA---AN 530
Query: 454 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 513
LRP ++ +++ + L EER K ++ A AA L A L+ E++ + A +
Sbjct: 531 YLRP-KEVDNINDIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYEYQKINAEKI 589
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAAIVEA 568
+ E ++ + + AK + V D +LRD + D I +KE E+
Sbjct: 590 QEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVDGEDTRIIGKRLKEIET-------E 638
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
H F S S+ PQ G+ V +KSL + +V++ V+ G R +
Sbjct: 639 HLTQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKCGSFRSTLSI 693
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
N+ I N P ++ K + S+ E+ S+ +++TSKN++D+RG+RV
Sbjct: 694 NDFEGI------NGEKPNFKMSKIE-------IKSTREDFSFS-KIRTSKNTIDVRGLRV 739
Query: 689 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGC 746
EA ++ + + L+++HG+GTG +K+ + L V K E + GC
Sbjct: 740 HEAEIIIEEKIRKFHGP--LWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDAANNEGGPGC 797
Query: 747 TVAYIK 752
++A+IK
Sbjct: 798 SIAWIK 803
>gi|389819500|ref|ZP_10209368.1| MutS2 protein [Planococcus antarcticus DSM 14505]
gi|388463298|gb|EIM05662.1| MutS2 protein [Planococcus antarcticus DSM 14505]
Length = 786
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 233/751 (31%), Positives = 368/751 (49%), Gaps = 99/751 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 71
LE ++ LT LE I CID + LD AS +L IR + R E L+SL++
Sbjct: 121 FLEKKESMPILTVLEHAINICIDDNGGV-LDSASSELRSIRQQLRTQESRVRERLESLVR 179
Query: 72 -KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K A+++ + ++T R R + +K ++ GI + SSSG T F+EP V
Sbjct: 180 GKNASKM-----LSDSIVTIRNDRFVIPVKQEYRNHY-GGIVHDQSSSGQTLFIEPDVVV 233
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN RL E E IL +L+A++ + E+ L++ + EIDL A+A + G
Sbjct: 234 QANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFLLVEVLGEIDLILAKAKYGAAHKG 293
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P ++++ + IN++ +HPL+ P
Sbjct: 294 TKPTMNTEGY------INLQKARHPLI----------------P---------------- 315
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP DI+ + +VITGPNTGGKT ++KT+GL++LM+++GL +PA + L
Sbjct: 316 ---KDEVVPNDIEFGGDITAIVITGPNTGGKTVTLKTVGLSTLMAQSGLPVPALDGSELS 372
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
FD I ADIGD QS+EQ+LSTFS H+ IVDIL SLV+ DE+G+GTDP EG ALA
Sbjct: 373 VFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALA 432
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
S+L + R + TTHY +L NA+ EF +ETL PTYR+L G G SN
Sbjct: 433 ISLLDEVHGRGARVIATTHYPELKAYGYNRPGVANASVEFDVETLSPTYRLLIGVPGRSN 492
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I+K +G II A+ + SL + RR+ E A + +
Sbjct: 493 AFEISKRLGLPEHIINHAKSFT-----GTDSKAVDSMIASLEKSRREAEQDAEQTKKILS 547
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASAD 549
E L +E+ + ++ +++ L+ K ++ ++ + A+V+ + V+ D QL +S+
Sbjct: 548 ESEQLKKELAKQLEEYEQQKERLEEKAKEKARKIVGQARVEAEAVISDLRKMQLNQSSSV 607
Query: 550 EINSLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATV 605
+ + LI K E+A+ P + ++ P + ++V V S G K T+
Sbjct: 608 KEHELIDAKKRLENAL--------PQNRILKKAAKDNAEKPLKANDEVKVISFGQK-GTL 658
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
VE ++ + VQ G +++++ ++++ + P KQ+E R
Sbjct: 659 VEKVSKNEWI-VQIGILKMKLPESDL---------SYTKP----EKQKETRTM------- 697
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 723
A+ R K LDLRG R E+A +++ L A + + +IHG GTG +++ V
Sbjct: 698 --ATLKDRDSHVKMELDLRGERYEDALARVEKYLDDALLSNYHQVSIIHGKGTGALRQGV 755
Query: 724 LEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ L+ HPRV Y + G TVA +K
Sbjct: 756 QQYLKKHPRVKSYRFGEAGEGGSGVTVAELK 786
>gi|168181815|ref|ZP_02616479.1| MutS2 family protein [Clostridium botulinum Bf]
gi|237796578|ref|YP_002864130.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum Ba4 str. 657]
gi|259511153|sp|C3KTI4.1|MUTS2_CLOB6 RecName: Full=MutS2 protein
gi|182674997|gb|EDT86958.1| MutS2 family protein [Clostridium botulinum Bf]
gi|229262891|gb|ACQ53924.1| MutS2 family protein [Clostridium botulinum Ba4 str. 657]
Length = 788
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 222/717 (30%), Positives = 365/717 (50%), Gaps = 81/717 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T RR R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRRDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL Q+L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKG 686
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
N + + + +K ++ + ++ ++S+DLRGM EEA + +D L
Sbjct: 687 SNFNSNSSKTKKSKKLNLN---------------LRKVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++HG GTGV+++ ++++L+ HP V +Y + G TV IK
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRYRLGEYGEGGTGVTVVEIK 788
>gi|258515602|ref|YP_003191824.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779307|gb|ACV63201.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 786
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 216/723 (29%), Positives = 351/723 (48%), Gaps = 94/723 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I DRAS+ L IR N ++ L+ + + P++T R R V +K +
Sbjct: 144 IADRASDALSQIRRRITNNRASVKERLEHIIRSPNYQKYLQDPIVTIREGRYVVPVKLEY 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + GI + S+SGAT F+EP VE NN RL +E E IL+ L+ +A+
Sbjct: 204 RGQV-QGIVHDTSASGATLFVEPMAVVEANNELRRLIAAEKQEIVKILTDLSCRVAQESE 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++ + +D A+A + MD P+L +NI+ +HPLL G
Sbjct: 263 PLGVTLEALGHLDFVLAKARLSSQMDAWAPVLVD------GPVVNIQKGRHPLLAG---- 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
DV VP+ + + E ++ITGPNTGGKT
Sbjct: 313 --------------DV------------------VPVSVHLGKEFDSLIITGPNTGGKTV 340
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM+++GL++PA++ F+ + ADIGD QS+EQ+LSTFS H+S IV IL
Sbjct: 341 TLKTIGLLVLMAQSGLHIPAESSSETGIFEQVFADIGDEQSIEQSLSTFSSHMSNIVSIL 400
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
SLVL+DE+G+GTDP+EG ALA +IL+ L ++ V TTHY++L R
Sbjct: 401 NQSGAGSLVLMDELGAGTDPTEGAALAQAILEKLHEQKAKIVATTHYSELKNFAYAHRRV 460
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +L+PTYR+L G G SNA IA +G + ++ RA+ + +Q
Sbjct: 461 ENASVEFDPISLKPTYRLLIGKPGRSNAFEIALRLGLEPGVVSRARDFL-----TTEQIE 515
Query: 464 KSELYQSLMEERRKLESQART-------AASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
SEL L +ER+ E + R A L A +L + + ++ +D+ +A +K
Sbjct: 516 ISELMLRLEKERQAAEEEKRIAELLRQDAEKLKARYTELEQMLREKREDILAKAHEEASK 575
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
+ +QE A + ++Q+ +N+L++ + E+ + IK + +
Sbjct: 576 TVKNTRQEAEEAIKEFRGMLQENDNRLKEMAVQEVRNKIKGMQGRLR------------K 623
Query: 577 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
E + P+ GE+V + +L + V+ V D LVQ G M++ + ++R
Sbjct: 624 APEKSHGGVVPRELLIGEEVFIPNLNQQ-GYVLNVSTDGKEALVQVGIMKLNMPVKDLRK 682
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ +K++N+ + +G + ++E S LDLRGMR EEA
Sbjct: 683 VDEAKKENSGKV----------QFAGLLKNKSQEIS---------TKLDLRGMRAEEAWL 723
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVA 749
+++ L A + ++V+HG GTG ++ + L+N RV + + G TV
Sbjct: 724 EVEKYLDDAFLAGLNKIYVVHGKGTGALRAMIQRELQNSRRVKSFRLGEHGEGGAGVTVV 783
Query: 750 YIK 752
+K
Sbjct: 784 DLK 786
>gi|255526069|ref|ZP_05392992.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296187117|ref|ZP_06855515.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
gi|255510255|gb|EET86572.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296048311|gb|EFG87747.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
Length = 787
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 217/675 (32%), Positives = 339/675 (50%), Gaps = 82/675 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L T R R + ++A HK +P G+ + SSSGAT ++EP G V NN L E AE
Sbjct: 186 LYTMRGDRYVLPVRAEHKGAVP-GLVHDQSSSGATLYIEPMGLVNLNNEIKELMLKEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+ EI S ++ D + E+D FA+A FA ++ P V+ +
Sbjct: 245 VDRILAYLSNEIYGSIIAVRNDADIIWELDFIFAKAKFASELNCTAP------KVNDEGI 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+I KHPL+ + VP+D+ +
Sbjct: 299 IDIVQGKHPLIDRKVV-----------------------------------VPLDVYLGK 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+VITGPNTGGKT ++KT+GL +M+ +GL +PA+ + + +F + ADIGD QS+E
Sbjct: 324 GFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPARENSTVSFFKEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV+I+ ESLVL DE+G+GTDP+EG ALA SIL+ L+ R V
Sbjct: 384 QSLSTFSSHMTNIVNIINKADDESLVLFDELGAGTDPTEGAALAVSILENLKSRGCRIVA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L K ENA+ EF +ETLRPTYR+L G G SNA I++ +G II
Sbjct: 444 TTHYSELKVYALKVNGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISRRLGLADYIIH 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIMDLYREIEDEA 503
A+ E + E Q +L + L E+ K E+ AR A L A+I D Y E
Sbjct: 504 DAK---ENINSETLQF--EDLIEDLQEKSVKAEANAREAEMLKLEAAKIKDKYEEKMGSL 558
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
++ +A +E +++ +E AK + D ++++ + A ++ ++E +A
Sbjct: 559 QNAREKAVINAQREAKRIIKE---AKEEADNILKEMRELEKAGYASDVRHKLEEERRKLA 615
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
++ + D+ + + + GE+V V SL K+ V+ P + V VQ G
Sbjct: 616 QKLD--KIDEKVNKVKRDDGEELKNVREGEEVFVPSLNQKV-IVISKPDNKGNVQVQAGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
M++ VK ++R + A N + R ++E + + +++ +S+
Sbjct: 673 MKIEVKLKDLRAVT-----GAVNKEEKKRVKREAKLN---------------LKSVASSV 712
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 737
DLRGM EA + D L A + +IHG GTGV++ + ++L++H V KY
Sbjct: 713 DLRGMDSLEAVYTADKYLDEAYLAGLKEVTLIHGKGTGVLRNTITDMLKHHSHVKKYRLG 772
Query: 738 QESPMNYGCTVAYIK 752
+ G TVA ++
Sbjct: 773 EYGEGGTGVTVAELR 787
>gi|374604257|ref|ZP_09677223.1| MutS2 family protein [Paenibacillus dendritiformis C454]
gi|374390142|gb|EHQ61498.1| MutS2 family protein [Paenibacillus dendritiformis C454]
Length = 785
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 247/766 (32%), Positives = 392/766 (51%), Gaps = 124/766 (16%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
PLL+ L + + +LEE I CID + I LD+AS +L IR E + R E L+++
Sbjct: 116 PLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASFELAAIRRELRIGETRIREKLEAM 174
Query: 70 LKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++ AA++ Q + LIT R R + +K ++ GI + S SGAT F+EP+
Sbjct: 175 IRSSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRSHY-GGIVHDQSGSGATLFIEPEA 228
Query: 129 AVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
V NN +L +++ EE I LS LT ++ ++Y V +D FA+A A
Sbjct: 229 IVAMNN---KLRETKLREEREIERILSRLTEQVGLLADVLEYDTGAVETLDFMFAKARLA 285
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
+ M P ++ + + + +HPL+ P
Sbjct: 286 REMKASLPRMNDRGFLKLRKA------RHPLI----------------P----------- 312
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
+D VPID+++ +++TGPNTGGKT ++KT+GL +LM+ +GL++PA++
Sbjct: 313 --------ADQVVPIDVELGNSYTSILVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAED 364
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
++ FD I ADIGD QS+EQ+LSTFS H++ I+ ILE ++ +SLVL+DE+G+GTDP+E
Sbjct: 365 GSQMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAE 424
Query: 366 GVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
G ALA +IL+++ R+G +V TTHY++L + NA+ EF ++TLRPTYR+L G
Sbjct: 425 GSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA IA+ +G + II A+ V + R + SL + R K E++ T
Sbjct: 484 VPGRSNAFAIAERLGLPKPIIDHARGEV-----TEEDMRVETMIASLEDNRLKAEAERET 538
Query: 485 AASLHAEI----MDLYREIEDEAKDLDRRAAHLKAK----------ETQQVQQELNFAKV 530
A+ L E+ L RE+E + + ++R +AK E Q++ EL +
Sbjct: 539 ASKLRMELEAMRQKLSRELEKQEAEREKRQEQAEAKARAIVDKARREAQEIIAELRQLAM 598
Query: 531 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
+ VQ E+ L +A + E+A A + A D V G
Sbjct: 599 E---GVQVKEHMLTEARK-------RLDEAAPEAKLAAKPKRDAKPVRRIEA-------G 641
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
+ V V SL K +VVE+ G++ +VQ G M+++V +++ + ++ K+AA P
Sbjct: 642 DDVRVYSLNQK-GSVVELAGEE--AVVQLGIMKMKVPLDDLELLSSA--KSAAKPV---- 692
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVL 708
QSG +N + + G V ++ LDLRG +EEA ++D L A + +
Sbjct: 693 ------QSG----ANVKRTRGESV---RSELDLRGANLEEALMEVDRFLDEALLGNLGQV 739
Query: 709 FVIHGMGTGVVKERVLEILRNHPRVAKYEQES--PMNYGCTVAYIK 752
++IHG GTG+++ + E LR H V + S G TVA +K
Sbjct: 740 YIIHGKGTGILRSGIQEFLRKHKHVKSFRLGSFGEGGTGVTVAELK 785
>gi|168334894|ref|ZP_02693015.1| MutS2 family protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 793
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 226/758 (29%), Positives = 364/758 (48%), Gaps = 137/758 (18%)
Query: 23 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG- 81
C + ELE +I CI I D S++ + +R M L +K I Q+
Sbjct: 126 CTY-KELEYEIERCI-----IAEDEFSDEATPTLSNIRRQMTRLTIKVKDTIQNIIQSSQ 179
Query: 82 ---GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
+ + ++T R R C+ IKA+ K GI + S SGAT F+EP VE NN
Sbjct: 180 YKDXLQESIVTVRDGRQCIPIKAAQKTAF-KGIVHDTSGSGATVFIEPAAVVEMNNKIRE 238
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L ++E E IL+ + +I+ E+ ++E+D+ FA++ +A ++ P+L+ +
Sbjct: 239 LMSAEQDEIQVILATFSEKISFITEELLLTFKSIIELDIIFAKSEYALKINARXPVLNEK 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+ IN++G +HPLL +++ V
Sbjct: 299 GY------INLKGARHPLLNSTAV-----------------------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
PID+ V E ++ITGPNTGGKT ++KT+GL ++M++ GL++PAK + L FD + A
Sbjct: 318 PIDVYVGKEFTTLLITGPNTGGKTVTLKTIGLFTIMAQCGLFIPAKENSELAIFDDVFAG 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
+GD QS+EQ+LSTFS H+ +++IL ++ SL+L+DE+GSGTDP EG ALA SIL++LR
Sbjct: 378 LGDEQSIEQSLSTFSAHMMNLIEILADMTTNSLILLDELGSGTDPVEGAALAMSILEHLR 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY++L ENA EF ++ LRPTY++L G G SNA I+K +
Sbjct: 438 KQQITTVATTHYSELKLYALSTPNVENAGCEFDIQELRPTYKLLIGVPGKSNAFEISKKL 497
Query: 439 GFDRKIIQRAQ-----------------------KLVERLRPERQQHRKSELYQSLMEER 475
GF +I A+ LVE+ + + L +S+ +ER
Sbjct: 498 GFPEHLIDDAKVFLQKENVKMEDILVELEYSKRTALVEKENALKFRQEAETLKESIKKER 557
Query: 476 RKLE-SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE--LNFAKVQI 532
+KLE S+ + + +L RE+E E +++ KE +Q+ +E +N + +
Sbjct: 558 QKLEVSRQKILKRAEEKGKELLREVEIETENI--------LKEVRQMARESLINVDENTL 609
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 592
++ Q +N + + EI+ I ++ + + + GE+
Sbjct: 610 QSIKQKVQNT-KLTKSSEIDKKIGYTKPKPKVLKDV-------------------KVGEE 649
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
V V S ++ V V ++ T VQ G + + V+ ++I S+ A N + L
Sbjct: 650 VLVISF-NQSGIVTNVSNNEAT--VQLGILPITVRLDDI-----SRNVQATNKSKNL--- 698
Query: 653 QEDRQSGSAGSSNEEASYGPR-VQTSKNSLDLRGMR----VEEASHQLDIALACWESRSV 707
++N+ S+ R T + +DLRGM +E AS LD A
Sbjct: 699 ----------TTNQNISHNVRKTMTIRPEIDLRGMTGDEAIEAASQYLDDAYLSGLKN-- 746
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
+ +IHG GTGV++E + +LR P V Y P YG
Sbjct: 747 VTIIHGKGTGVLREAIKNMLRKIPHVQSYR---PGKYG 781
>gi|282916393|ref|ZP_06324155.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283770204|ref|ZP_06343096.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
gi|282319833|gb|EFB50181.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283460351|gb|EFC07441.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
Length = 782
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 224/757 (29%), Positives = 376/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ +++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNEEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|298243242|ref|ZP_06967049.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
gi|297556296|gb|EFH90160.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
Length = 816
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 237/747 (31%), Positives = 360/747 (48%), Gaps = 117/747 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + + + L L+ + + + +P+IT R R + ++A
Sbjct: 144 VLDTASPTLRKLRFDIRGASQRLQDRLRSLVGEY--GKHLQEPIITMRNDRYVIPVRAES 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + GI + SSSGAT F+EP VE NN L E E IL +L+AEI
Sbjct: 202 RGQV-RGIVHDQSSSGATVFVEPMVVVELNNRIRELQVEERREIERILRVLSAEIGHEAE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++ + E D A++ +A+ PIL+++ I++ +HPLL G
Sbjct: 261 SLTVAVELLAEFDTYLAKSRYARMTSASEPILNAEGR------IDLHNARHPLLTGKV-- 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VP + + E +VVITGPNTGGKT
Sbjct: 313 ----------------------------------VPTNFYLGREFHMVVITGPNTGGKTV 338
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+++PA H + F+ +LADIGD QS+EQ+LSTFS H+SRI+DIL
Sbjct: 339 ALKTVGLLTLMAQSGMHIPADVHSEIAVFEDVLADIGDEQSIEQSLSTFSSHMSRIIDIL 398
Query: 344 E--------------------LVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDR 380
LV R++ LVL DE+G+GTDPSEG ALA +IL YL +R
Sbjct: 399 RRVEAVQQQDVPDIHGRLAETLVKRQNHHVLVLFDELGAGTDPSEGSALARAILSYLLER 458
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
V TTHY +L + NA+ EF++ETL PTY++ G G SNAL IA +G
Sbjct: 459 KVSTVATTHYTELKAFAYEQPGVVNASVEFNVETLSPTYKLSIGLPGRSNALAIATRLGL 518
Query: 441 DRKIIQ-----------RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
D II+ R + L+E L+ ERQ + S+ ER + E Q +
Sbjct: 519 DEPIIESSRQFLGSSGVRMENLLEGLQSERQAASDERYHLSM--ERAEAEYQRKQLQEER 576
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID--TVVQDFENQLRDAS 547
+ + +I ++A+ RR E +VQ +L + D +V ++ NQ RD +
Sbjct: 577 HRLEEERVKIINQARAQARR-------ELDEVQNKLAKIRATADRASVSRERLNQARDTA 629
Query: 548 ADEINSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
+ E +A + E +P +D +V + Q G+ V V S G +LA +V
Sbjct: 630 --------RHLEDKVALVPEPAQPRKEDPAVQRLDGPL---QLGDTVRVLSFG-QLAELV 677
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+ D + VQ G MR RV +NI + SKR+ + K++E SA S
Sbjct: 678 GLSPDHSSAEVQMGSMRFRVDVDNIERV--SKRQAS--------KEREKSVIPSA-PSIV 726
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
Y R S LD+RG RVE+A +L+ L A +++ ++HG GTG ++ V
Sbjct: 727 MPRYEDRPAVSMQ-LDMRGWRVEDALEELETYLNDATMAGLALVRILHGKGTGALRSAVR 785
Query: 725 EILRNHPRVAKYEQESPMNYGCTVAYI 751
+ L +HP V + +P G V +
Sbjct: 786 QQLSHHPLVKSFNSAAPQEGGDGVTVV 812
>gi|430749370|ref|YP_007212278.1| MutS2 family protein [Thermobacillus composti KWC4]
gi|430733335|gb|AGA57280.1| MutS2 family protein [Thermobacillus composti KWC4]
Length = 784
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 236/763 (30%), Positives = 378/763 (49%), Gaps = 107/763 (14%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H PL L LTE LEE I CID + ++ D+AS +L IR E + R
Sbjct: 109 IHEDHPLPLLHGLAGQLTEHRALEESIARCIDEQAYVV-DQASPELAAIRRELRGGEARI 167
Query: 63 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
E L+ L++ + Q + +IT R R + +K ++ GI + S SGAT
Sbjct: 168 REKLEQLVRSPSVQKM----LQDAIITIRGDRFVIPVKQEYRGHF-GGIVHDQSGSGATL 222
Query: 123 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
F+EP+ V+ NN L +E E IL LTAE A+ ++ ++ + ++D AFA++
Sbjct: 223 FIEPESIVQMNNKLRELKMAEEREIERILLRLTAETAEHADDLAANLELLGQLDFAFAKS 282
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
A+ M P ++ + + +HPLL S+
Sbjct: 283 RLAREMRASLPRMNDRGFLKLKRG------RHPLLPPESV-------------------- 316
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
VP+D+++ ++ITGPNTGGKT ++KT+GL SLM+ +GL++P
Sbjct: 317 ---------------VPLDVELGNSYTAIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVP 361
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A + +L FD I ADIGD QS+EQNLSTFSGH++ I+ +L ++ +SLVL+DE+G+GTD
Sbjct: 362 ADDGSQLCVFDAIYADIGDEQSIEQNLSTFSGHMTNIIRMLREMTPKSLVLLDELGAGTD 421
Query: 363 PSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
P+EG ALA +IL+++ R+G +V TTHY++L NA+ EF ++TL PTYR+
Sbjct: 422 PAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYNRKGIINASMEFDVQTLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G R II+RA+ V R ++ SL E+R+ E++
Sbjct: 481 LVGVPGRSNAFAIAERLGLPRSIIERARGEV-----SEDDRRVEDMIASLEEDRQSAEAE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
+TA SL AE+ L E + +++ + AK ++ ++ + A+ + + ++ D
Sbjct: 536 RQTAESLRAEMERLKERHAAELRKFEQQRDRMLAKAQEEAREAVAKARREAEAIIAD--- 592
Query: 542 QLRDASADEINSLIKESESAIAAIVEAHRPDDDF--------SVSETNTSSFTPQFGEQV 593
LR + +E S +KE + ++EA R D+ S + G++V
Sbjct: 593 -LRRMALEEAAS-VKEHK-----LIEARRRLDEAIPDLTPKPSAQGAARKPVRVEPGDEV 645
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
V SL K V+E + LVQ G ++++V +++ I + A L++ +
Sbjct: 646 TVISLNQK-GVVLET--GETEALVQIGILKMKVALSDLERIKQPPQPKQPQAAASLKRTK 702
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 711
D + LDLRG +E+A ++D L A + + +I
Sbjct: 703 GD---------------------LRMELDLRGSTLEDAILEVDRFLDEAYLANLGQVTII 741
Query: 712 HGMGTGVVKERVLEILRNHPRVAKYEQES--PMNYGCTVAYIK 752
HG GTGV++ + + LR H V + + G TVA +K
Sbjct: 742 HGKGTGVLRSGIRDFLRRHRLVKSFRDGAYGEGGNGVTVAELK 784
>gi|323490483|ref|ZP_08095690.1| MutS2 protein [Planococcus donghaensis MPA1U2]
gi|323395887|gb|EGA88726.1| MutS2 protein [Planococcus donghaensis MPA1U2]
Length = 786
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 231/748 (30%), Positives = 367/748 (49%), Gaps = 93/748 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 71
LE ++ LT LE I CID + LD AS +L IR + R E L+SL++
Sbjct: 121 FLEKKESMPILTALEHAINVCIDDNGGV-LDSASTELRSIRQQLRTQESRVRERLESLVR 179
Query: 72 -KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K A+++ + ++T R R + +K ++ GI + SSSG T F+EP V
Sbjct: 180 GKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY-GGIVHDQSSSGQTLFIEPDSVV 233
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN RL E E IL +L+A++ + E+ L+D + EIDL A+A + G
Sbjct: 234 QANNEVRRLKMKEKEEIDRILMMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKG 293
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P ++++ + IN++ +HP++ P K +V
Sbjct: 294 TKPTMNTEGY------INLKKARHPMI----------------P-KEEV----------- 319
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VP DI+ + +VITGPNTGGKT ++KT+GLA+LM+++GL +PA + L
Sbjct: 320 -------VPNDIEFGRDITAIVITGPNTGGKTVTLKTVGLATLMAQSGLPVPALDGSELA 372
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
FD I ADIGD QS+EQ+LSTFS H+ IVDIL SLV+ DE+G+GTDP EG ALA
Sbjct: 373 VFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALA 432
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
S+L + R + TTHY +L NA+ EF +ETL PTYR+L G G SN
Sbjct: 433 ISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANASVEFDVETLSPTYRLLIGVPGRSN 492
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I+K +G II A+ + SL + RR+ E A + +
Sbjct: 493 AFEISKRLGLPEHIISHAKSFT-----GTDSKAVDSMIASLEKSRREAEQDAERTQEVLS 547
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASAD 549
E L +E+ + ++ +++ + K ++ ++ ++ A+ + ++V+ + QL S+
Sbjct: 548 ESEQLKKELAQQLEEYEQKKEQREEKAKEKARKIVDEARAEAESVISELRKMQLNQGSSV 607
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEV 608
+ + LI + A+ P++ + P Q ++V V S G K T+VE
Sbjct: 608 KEHELINAKKRLDEAM-----PENRILKKAAKANEAKPLQPNDEVKVISFGQK-GTLVEK 661
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
++ + VQ G +++++ ++++ + P KQ+E R A
Sbjct: 662 VSKNEWI-VQIGILKMKLPESDL---------SFTKP----EKQKETRTM---------A 698
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
+ R K LDLRG R E+A +++ L A + + +IHG GTG +++ V +
Sbjct: 699 TLKDRDSHVKMELDLRGERYEDALARVEKYLDDALLSNYHQVSIIHGKGTGALRQGVQQY 758
Query: 727 LRNHPRVAKYE--QESPMNYGCTVAYIK 752
L+ HPRV Y + G TVA +K
Sbjct: 759 LKKHPRVKSYRFGEAGEGGSGVTVAELK 786
>gi|251795420|ref|YP_003010151.1| MutS2 family protein [Paenibacillus sp. JDR-2]
gi|247543046|gb|ACT00065.1| MutS2 family protein [Paenibacillus sp. JDR-2]
Length = 789
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 233/764 (30%), Positives = 375/764 (49%), Gaps = 104/764 (13%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL 66
H P+ L + L+E LE+ I CID + + +D AS +L IR R + +
Sbjct: 109 LHEDDPIPLLFQMTEQLSEHKPLEDAIFDCIDDQAEV-MDSASPELASIR----RELRSG 163
Query: 67 DSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
+S +++ Q+ ++ + K L IT R R + +K ++ GI + S SGAT
Sbjct: 164 ESRIREKLEQMIRSSSVQKMLQDSIITLRNDRYVIPVKQEYRSHF-GGIVHDQSGSGATL 222
Query: 123 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
F+EP+ V NN +E+ E IL LTA A+ ++ Y D + ++D A+A+A
Sbjct: 223 FIEPEAIVSMNNKLRETKAAELREIEKILQKLTARAAEHVEDLLYNQDLLGKLDFAYAKA 282
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
A M P ++ + + I+ +HPL+
Sbjct: 283 RLAHEMKATLPRMNDRGF------LKIKRGRHPLI------------------------- 311
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
D VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +GL++P
Sbjct: 312 ----------APDKVVPLDVELGNQFTAIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVP 361
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A +L FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTD
Sbjct: 362 ADEGSQLCVFDSIYADIGDEQSIEQSLSTFSSHMTNIIRILGSMTSKSLVLLDELGAGTD 421
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P+EG ALA +IL+++ + TTHY++L NA+ EF + TL PTYR+L
Sbjct: 422 PAEGSALAIAILEHIHKLDSRIIATTHYSELKAYAYNRKGVINASMEFDVATLSPTYRLL 481
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
G G SNA IA+ +G + II A+ V + R + SL E+R ES+
Sbjct: 482 VGVPGRSNAFAIAERLGLSQAIIDHARGEV-----SEEDQRVENMIASLEEDRLSAESER 536
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
TA S+ E+ + E E + + + + K ++ + + A+ + D ++ D
Sbjct: 537 NTAESMRREMEAQRKRHEAELERFEEQRDKMLQKAQEEAHEAVAKARREADQIIAD---- 592
Query: 543 LRDASADEINSLIKESESAIAAIVEAHR----PDDDFSVSETNTSSFTPQ------FGEQ 592
LR + +E S +KE + ++EA R + + + ++ + G++
Sbjct: 593 LRKLALEEGAS-VKEHK-----LIEAKRRLEEAAPELATKKKRSAGGGAKKPAKIGAGDE 646
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
V V SL K V E+ D T VQ G M+++V +++ I P +L KQ
Sbjct: 647 VMVYSLNQK-GIVAEIGASDAT--VQLGIMKMKVALDDLELI---------KPVAQLNKQ 694
Query: 653 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFV 710
Q +Q+ S S E+ + + LDLRG +EEA ++D L + +++
Sbjct: 695 QP-KQTASLKRSKED--------SLRMELDLRGANLEEAIIEVDRFLDESYLGGLGQVYI 745
Query: 711 IHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
IHGMGTGV++ + + LR H V Y + G TVA +K
Sbjct: 746 IHGMGTGVLRAGIQQYLRKHSLVKTYRLGKYGEGGAGVTVAELK 789
>gi|456014379|gb|EMF47994.1| Recombination inhibitory protein MutS2 [Planococcus halocryophilus
Or1]
Length = 786
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 233/749 (31%), Positives = 365/749 (48%), Gaps = 95/749 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 71
LE ++ LT LE I CID + LD AS +L IR + R E L+SL++
Sbjct: 121 FLEKKESMPILTVLEHAINVCIDDNGGV-LDSASTELRSIRQQLRTQESRVRERLESLVR 179
Query: 72 -KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K A+++ + ++T R R + +K ++ GI + SSSG T F+EP V
Sbjct: 180 GKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY-GGIVHDQSSSGQTLFIEPDSVV 233
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN RL E E IL +L+A++ + E+ L+D + EIDL A+A + G
Sbjct: 234 QANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKG 293
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P ++++ + IN++ +HP++ P
Sbjct: 294 TKPTMNTEGY------INLKKARHPMI----------------P---------------- 315
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP DI+ E +VITGPNTGGKT ++KT+GLA+LM+++GL +PA + L
Sbjct: 316 ---RDEVVPNDIEFGREITAIVITGPNTGGKTVTLKTVGLATLMAQSGLPVPALDGSELA 372
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
FD I ADIGD QS+EQ+LSTFS H+ IVDIL SLV+ DE+G+GTDP EG ALA
Sbjct: 373 VFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALA 432
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
S+L + R + TTHY +L NA+ EF +ETL PTYR+L G G SN
Sbjct: 433 ISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANASVEFDVETLSPTYRLLIGVPGRSN 492
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I+K +G II A+ + SL + RR+ E A + +
Sbjct: 493 AFEISKRLGLPEHIISHAKSFT-----GTDSKAVDSMIASLEKSRREAERDAERTQEVLS 547
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASAD 549
E L +E+ + ++ +++ + K ++ ++ ++ A+ + ++V+ + QL S+
Sbjct: 548 ESEQLKKELAQQLEEYEKQKEQREEKAKEKARKIVDEARAEAESVISELRKMQLNQGSS- 606
Query: 550 EINSLIKESESAIAAI-VEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVE 607
+KE E A +E P + ++ P Q ++V V S G K T+VE
Sbjct: 607 -----VKEHELIYAKKRLEDAMPQNRILKKAAKDNAAKPLQPNDEVKVISFGQK-GTLVE 660
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
++ + VQ G +++++ ++++ + P KQ+E R
Sbjct: 661 KVSKNEWI-VQIGILKMKLPESDL---------SFTKP----EKQKETRTM--------- 697
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLE 725
A+ R K LDLRG R E+A +++ L A + + +IHG GTG +++ V +
Sbjct: 698 ATLKDRDSHVKMELDLRGERYEDALARVEKYLDDALLSNYHQVSIIHGKGTGALRQGVQQ 757
Query: 726 ILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L+ HPRV Y + G TVA +K
Sbjct: 758 YLKKHPRVKSYRFGEAGEGGSGVTVAELK 786
>gi|49483307|ref|YP_040531.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|282903692|ref|ZP_06311580.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|282905461|ref|ZP_06313316.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908435|ref|ZP_06316266.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283957887|ref|ZP_06375338.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427631|ref|ZP_06820263.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591415|ref|ZP_06950053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|415684425|ref|ZP_11449554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|418566423|ref|ZP_13130804.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|418581975|ref|ZP_13146053.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595208|ref|ZP_13158829.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|418602382|ref|ZP_13165788.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|418897682|ref|ZP_13451752.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900552|ref|ZP_13454609.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908854|ref|ZP_13462859.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418916937|ref|ZP_13470896.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922724|ref|ZP_13476641.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982055|ref|ZP_13529763.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985723|ref|ZP_13533409.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749238|sp|Q6GHU1.1|MUTS2_STAAR RecName: Full=MutS2 protein
gi|49241436|emb|CAG40120.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|282328100|gb|EFB58382.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330753|gb|EFB60267.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595310|gb|EFC00274.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|283790036|gb|EFC28853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295127989|gb|EFG57623.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576301|gb|EFH95017.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|315193814|gb|EFU24209.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|371970636|gb|EHO88053.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|374396082|gb|EHQ67333.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|374402075|gb|EHQ73118.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|377703020|gb|EHT27336.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704336|gb|EHT28645.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377705541|gb|EHT29845.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710385|gb|EHT34623.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377736047|gb|EHT60077.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750111|gb|EHT74049.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377754850|gb|EHT78756.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377760717|gb|EHT84593.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 782
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|427394069|ref|ZP_18887571.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
gi|425730239|gb|EKU93079.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
Length = 793
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 216/744 (29%), Positives = 365/744 (49%), Gaps = 99/744 (13%)
Query: 23 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 82
N L++L + I +D ++ D AS L+ IR K+ +++ L+ + + ++
Sbjct: 129 LNPLSDLSKTIQAVVDEDGRVV-DSASPKLKGIRTGIKQVEQSIRQKLENIT-RGSKSRY 186
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +IT R R V +KA K + GI + S++G T F+EP+ + NN ++
Sbjct: 187 LTDAIITIRNDRYVVPVKADSKNVFG-GIVHDQSATGQTLFVEPQSVLNQNNKLKEYTSQ 245
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E AE +L+ L+ +I ++++ + + +D A+A +++ + PI V
Sbjct: 246 EKAEVDRLLADLSQKITPYSKDLEQDLQVLTLLDFIAAKAKYSRQLSASQPI------VD 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ I + G +HPL+ +P D V DI
Sbjct: 300 DNREIALYGARHPLI---------------DP--------------------DQVVENDI 324
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ + + +V+TGPNTGGKT +KTLGL +M ++GL+LP K++ R+ F+ ADIGD
Sbjct: 325 TLGLDYKAIVVTGPNTGGKTVVLKTLGLLQIMGQSGLHLPVKDNSRIGVFEKCYADIGDE 384
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV IL + +L+++DE+G+GTDP EG ALA +IL Y+ R
Sbjct: 385 QSIEQSLSTFSSHMTNIVSILSDIDEATLIVLDELGAGTDPQEGAALAIAILDYISARGS 444
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V+T+HY +L NA+ F + +L+PTY++L G G SNA +A+ +G +
Sbjct: 445 TVVITSHYPELKAYAYNRPETINASMAFDVNSLKPTYKLLLGIPGRSNAFEVAQRLGLNN 504
Query: 443 KII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
+II Q +++E L +RQ + K + L+ + A+ LH +
Sbjct: 505 EIIAASKQLMSGESQSVNQMIEDLEAKRQAYHK---------RNQSLQKELYDASKLHND 555
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ + Y ++ +++L+ +A K K + V++ A+ Q D ++ D + QL S D
Sbjct: 556 LKNFYEAYQERSQELEDKA---KDKANRIVEK----AQEQADQIIDDLRQKQLNQPSEDN 608
Query: 551 INSL-IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
I +++S ++ + + V + G+QVHV S D+ T+V+
Sbjct: 609 IKEHEFIDAKSRLSNMKYEQKHLKQNKVLQKEKEKKALAVGDQVHVDSF-DQEGTLVDQT 667
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
GD V VQ G +++++ + ++ + K K A A LR
Sbjct: 668 GDSKWV-VQMGMLKMKIDEEDLTLLEKGKSKQATKQANSLR------------------- 707
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
V + K +DLRG RV++A H+LD I A + + VIHGMGTG V++ V + L
Sbjct: 708 --ANVGSVKTEIDLRGERVDQAVHRLDQYIDQALLANYGTVTVIHGMGTGAVRKAVKDYL 765
Query: 728 RNHPRVAKYEQESPMNYGCTVAYI 751
H RV Y ++P N G A I
Sbjct: 766 SKHKRVQSY-NDAPANQGGNGATI 788
>gi|418891775|ref|ZP_13445890.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377731107|gb|EHT55164.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
Length = 782
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 375/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|424834848|ref|ZP_18259539.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
gi|365978409|gb|EHN14489.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
Length = 788
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 226/733 (30%), Positives = 372/733 (50%), Gaps = 86/733 (11%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDS 68
Y L ++ + L ++EE+I I+ + I DRA+ L IR K + ++S
Sbjct: 115 YRALEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRATSTLYNIRRSLKEKNYSVRDKINS 173
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
L++ ++ + + + T R R + +KA HK +P G+ + SS+GAT F+EP
Sbjct: 174 LVRSYSSYL------QENIYTVRGDRYVLPVKAEHKGAVP-GLVHDQSSTGATLFIEPMS 226
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
V NN L E AE ILS+L+++I + +K + V E+D FA+A FA
Sbjct: 227 LVNLNNEIKELMLKEKAEIERILSVLSSKINANITGVKTDANIVWELDFIFAKAKFASEY 286
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ CP ++ + V IEG +HPL+ +
Sbjct: 287 NCTCPTINDEGIVDI-----IEG-RHPLIDRRQV-------------------------- 314
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPI +K+ E ++ITGPNTGGKT ++KT+GL LM+ +GL +PA+ +
Sbjct: 315 ---------VPISVKLGDEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSV 365
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+ +F+ + ADIGD QS+EQ+LSTFS H+ IVDI++ SLVL DE+G+GTDP+EG A
Sbjct: 366 ISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVDIMDKADENSLVLFDELGAGTDPTEGAA 425
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA SIL+ LR R + TTHY++L + ENA+ EF +ETLRPTYR+L G G
Sbjct: 426 LAISILENLRKRGSKIIATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGIPGK 485
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I+K +G II A++ + + R EL Q+L E+ K + AR A +L
Sbjct: 486 SNAFEISKRLGLPDYIIDFARENI-----SNENIRFEELIQNLQEKSIKAQEDARLAENL 540
Query: 489 HAEIMDLYREIEDEAKDLD--RRAAHLKA-KETQQVQQELNFAKVQIDTVVQDFENQLRD 545
E ++ E++ + L R A + A +E + + +E AK + D +++D R
Sbjct: 541 KLERDKEKKKYEEKLEGLQKVRDNAFMDARREAKNIIRE---AKEEADKILKDIRQLERM 597
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
+ + ++E + +++ + +V + + G++V + S+ K+ V
Sbjct: 598 GYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKE-GDEVLLVSINQKV-IV 655
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+ P + VLVQ G M++ NI+ + +K N+ +G++
Sbjct: 656 LSKPDNKGDVLVQAGIMKITA---NIKDLRAAKGSNS---------------NGNSSKIK 697
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 723
+ + ++S+DLRGM EEA + +D L A + ++HG GTGV+++ +
Sbjct: 698 KSKKLNLNLSRVESSVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTI 757
Query: 724 LEILRNHPRVAKY 736
+++L+ HP V ++
Sbjct: 758 MDMLKGHPHVKRH 770
>gi|56964440|ref|YP_176171.1| recombination and DNA strand exchange inhibitor protein [Bacillus
clausii KSM-K16]
gi|81678829|sp|Q5WEK0.1|MUTS2_BACSK RecName: Full=MutS2 protein
gi|56910683|dbj|BAD65210.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length = 787
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 223/730 (30%), Positives = 359/730 (49%), Gaps = 91/730 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L+ +E+ I CID + LD AS L +R + + + S L ++ +
Sbjct: 129 LSPIEKAIKQCIDDNGYV-LDSASTSLRTVRHQIRSYESGIKSKLDQLTRSSNTRKMLSD 187
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
++T R R + +K ++ GI + SSSGAT F+EP V NN E
Sbjct: 188 AIVTIRSDRYVLPVKQEYRGTF-GGIVHDQSSSGATLFIEPAAIVTLNNQLTEAKAKEKR 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL L+A++A+ ++ +D++ ++D A+A +A+ + V P L+ + ++
Sbjct: 247 EIERILRELSAKVAEESEQLLLNVDKLAQLDFICAKAYYAKAVKAVKPTLNDRGYLDLRQ 306
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPLL P D VP D+ +
Sbjct: 307 A------RHPLL----------------P-------------------PDKVVPSDMAIG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ R +VITGPNTGGKT ++KT+GL +LM+++GL++PA L F+ I ADIGD QS+
Sbjct: 326 DQVRSLVITGPNTGGKTVTLKTIGLLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H+ IV IL ++ SL+L DE+G+GTDP+EG ALA SIL ++ R LAV
Sbjct: 386 EQSLSTFSSHMKNIVSILNEMNENSLILFDELGAGTDPTEGAALAISILDHVYKRGALAV 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L NA+ EF +ETLRPTYR+L G G SNA I++ +G D +II
Sbjct: 446 ATTHYSELKGYAYNREGALNASVEFDVETLRPTYRLLVGVPGRSNAFAISRRLGLDERII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+A +L+ + + ++ SL + ++ +S+ A ++ E L R++E
Sbjct: 506 DQA-----KLQIDSDASQVEKMIASLEDSQKSAQSEWSRAEAVRREAEALKRDLEKRMAS 560
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAI 562
+ K Q+ ++ + A+ + ++ + + + A + + LI K+ E A
Sbjct: 561 FEEMKEAALQKAEQKAEKVVAAAQENAELIISELRDLQKQGVAVKEHQLIEARKQLEEAA 620
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
+V R + + P+ G++V V S K TVV+ GD++ VQ G M
Sbjct: 621 PKLVSKKRKQVK---KQAEKAKRLPEPGDEVKVLSFNQK-GTVVKKIGDNE-YQVQLGIM 675
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS--NEEASYGPRVQTSKNS 680
++ V ++I+ + +QE RQ A ++ +A K
Sbjct: 676 KMAVPIDDIQLL-----------------EQERRQPEKAITTIRGNDAHV-------KAE 711
Query: 681 LDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
LDLRG R E+A ++ D LA + S+ IHG GTG +++ V + + NHPRV K
Sbjct: 712 LDLRGERYEDAMRRVEKYIDDALLAGYHQVSI---IHGKGTGALRKGVKQFVANHPRV-K 767
Query: 736 YEQESPMNYG 745
++ MN G
Sbjct: 768 SARDGGMNEG 777
>gi|33860777|ref|NP_892338.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33633719|emb|CAE18676.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 803
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 222/731 (30%), Positives = 369/731 (50%), Gaps = 107/731 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK-------PLITKRRSRMC 96
I DRAS+ L +R D L KK +I I K +I R R
Sbjct: 158 ISDRASQKLANLRQ---------DLLSKKSERRILVDKFIQKNINYIQDTIIGDRYGRPV 208
Query: 97 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILS 152
V IK GI + S+SG T ++EP+ V N ME R++ EE +L
Sbjct: 209 VAIKVQFGEKFK-GIIHDSSASGNTIYLEPESIVFKGNKIASMEARVA----GEEFKLLK 263
Query: 153 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 212
+ ++ +++ + + D +L + A R+ ++ W+ G PI+ + + +N+ G
Sbjct: 264 EWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIGGNAPIVEN------NPIVNLIGF 317
Query: 213 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 272
HPLL+ + + + PV ID + T+VV
Sbjct: 318 SHPLLIWENKKKEAPK----------------------------PVSIDFHINRNTKVVA 349
Query: 273 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 332
ITGPNTGGKT ++K LG+A LM+++GL++P+ +P +P+ I DIGD QSLE NLSTF
Sbjct: 350 ITGPNTGGKTVALKGLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQSLEGNLSTF 409
Query: 333 SGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 389
SGHI RI +ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+ + + TTH
Sbjct: 410 SGHILRIRNILESLNNKKGLSVVLLDEIGSGTDPSEGTALAIALLKEFATLSDITLATTH 469
Query: 390 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 449
Y D+ LK D RFEN + F E+ +P Y + WG G SNAL+I++ IG D KI+ A
Sbjct: 470 YGDIKALKYSDDRFENVSVAFDEESFKPRYTLNWGIPGRSNALSISRRIGIDEKILNEAA 529
Query: 450 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 509
L+P+ ++ S + + L +ER K ++ A AA L A L+ EI+ +
Sbjct: 530 NY---LKPKEVENINS-IIKGLEDERIKQQNSAEEAAELIARTEILHDEIKSNYEFQKNN 585
Query: 510 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKESESAIAAIV 566
A ++ E Q++ + + AK ++ +++ ++Q +A+ ++ I +KE E
Sbjct: 586 AEKIQESEKQKLSKYIRAAKKEVINLIKKLKDQ--NANGEDSRLIGIRLKEIEKE----- 638
Query: 567 EAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+++TN + S++P+ G+ + +KSL + ++++ + V+ G R
Sbjct: 639 ---------HLTQTNINKEISWSPKIGDFIKIKSL-NSTGQIIDIDRKARSFEVKCGSFR 688
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ N + N ++ N N ++ +ED S+ +++T+KN++D+
Sbjct: 689 STLLINEFEGL-NGEKPNFKNSKIQINSVRED------------FSFS-KIRTNKNTIDV 734
Query: 684 RGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM- 742
RGMRV EA ++ + + L+++HG+GTG +K+ +L L + V K E +
Sbjct: 735 RGMRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLLIWLSSLHYVDKVEDAATNE 792
Query: 743 -NYGCTVAYIK 752
GC++A+IK
Sbjct: 793 GGSGCSIAWIK 803
>gi|157412576|ref|YP_001483442.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9215]
gi|157387151|gb|ABV49856.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9215]
Length = 810
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 227/726 (31%), Positives = 359/726 (49%), Gaps = 97/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL-------ITKRRSRMC 96
I D AS +L ++R E L KK+ +I I K L I R R
Sbjct: 165 ISDNASNELSVLRKEL---------LSKKLERKILVEKFIQKNLAYLQDTTIGDRNGRPV 215
Query: 97 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 156
+ +K ++ + GI + SSSG T + EP+ V N L AEE +L +
Sbjct: 216 LAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEEFKLLKKWSQ 274
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
++ + + + +L ++ A R+ +++W+ G P +S + G HPL
Sbjct: 275 IVSDNSENLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS------LVGFSHPL 328
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
L+ + KG PV +D + +VV ITGP
Sbjct: 329 LIWEHKK---------------------------KGAPP-PVAVDFHINRNIKVVAITGP 360
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+NLSTFSGHI
Sbjct: 361 NTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSGHI 420
Query: 337 SRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
SRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ + + TTHY D+
Sbjct: 421 SRIKEILDSLNNKRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDITLATTHYGDI 480
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I+ A
Sbjct: 481 KALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENILNEAANY-- 538
Query: 454 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 513
LRP ++ +E+ + L EER K ++ A AA L A L+ E++ + A +
Sbjct: 539 -LRP-KEVDNINEIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYEYQKINAEKI 596
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAAIVEA 568
+ E ++ + + AK + V D +LRD + + I +KE E+
Sbjct: 597 QEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVNGEDTRIIGKRLKEIET-------E 645
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
H F S S+ PQ G+ V +KSL + +V++ V+ G R +
Sbjct: 646 HLIQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKCGSFRSTLSV 700
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
N+ I N P ++ K + S+ E+ S+ +++TSKN++D+RG+RV
Sbjct: 701 NDFEGI------NGEKPNFKMSKIE-------IKSTREDFSFS-KIRTSKNTIDVRGLRV 746
Query: 689 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGC 746
EA ++ + + L+++HG+GTG +K+ + L V K E + GC
Sbjct: 747 HEAEIIIEEKIRKFHGP--LWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDAANNEGGAGC 804
Query: 747 TVAYIK 752
++A+IK
Sbjct: 805 SIAWIK 810
>gi|418329211|ref|ZP_12940290.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418631982|ref|ZP_13194426.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|420192813|ref|ZP_14698670.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
gi|365230873|gb|EHM71948.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374833651|gb|EHR97326.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|394260629|gb|EJE05438.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
Length = 782
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 233/762 (30%), Positives = 369/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR+E +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSEISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ K L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|384459066|ref|YP_005671486.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
gi|325509755|gb|ADZ21391.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
Length = 806
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 352/702 (50%), Gaps = 85/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKA 101
I D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA
Sbjct: 163 ISDKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKA 218
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 219 EYKAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKS 277
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 278 IVAVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI---- 327
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+P K VP++I + E +VITGPNTGGK
Sbjct: 328 -----------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGK 356
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 357 TVTLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVR 416
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 417 IIDDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTE 476
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K + + E +
Sbjct: 477 NVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE- 535
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 518
+L Q+L K E R A L + + E++ + +A H +E
Sbjct: 536 ----DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREA 591
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+++ +E AK + D +++D R + E ++ES + + + ++ ++S
Sbjct: 592 KKIIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNIS 646
Query: 579 ETNTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
E + + + GE+V + SL K V+ V +Q G M++ VK ++R N
Sbjct: 647 ERDQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN 705
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
NP + K + R++ +++ S+DLRG+ EEA ++ D
Sbjct: 706 -------NPISKKEKAVKKREA------------RLNLKSVAQSIDLRGLDSEEAIYKTD 746
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
I L A + VIHG GTGV++ + +L+ + V Y
Sbjct: 747 IYLDEAYMAGLGSVTVIHGKGTGVLRNAINTMLKKNSHVKSY 788
>gi|342216985|ref|ZP_08709632.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587875|gb|EGS31275.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 786
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 217/688 (31%), Positives = 332/688 (48%), Gaps = 109/688 (15%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T R R + +K +K + G+ + SSSGAT F+EP VE NN L N E E
Sbjct: 184 LVTIRAGRYVIPVKQENKSSI-KGLIHDTSSSGATVFIEPLAVVELNNQLRELENKERQE 242
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ ++A++ +K ++E+D FA+ A + P +S + + D
Sbjct: 243 IHRILQELSDQLAENLPALKQNNYAMVELDFIFAKGRLALEEKAIKPRISQEKKLKIDQG 302
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPLL +P K VPID+ +
Sbjct: 303 ------RHPLL---------------DPRKV--------------------VPIDLDLGY 321
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
E + ++ITGPNTGGKT S+KT GL LM++AGL++PA + +P I ADIGD QS+E
Sbjct: 322 EFKSLIITGPNTGGKTVSLKTTGLLILMAQAGLFVPAGPNTVIPLVHEIYADIGDEQSIE 381
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
QNLSTFS H+ IVDIL ++ + LVL DE+G+GTDP+EG ALA +I+ +R+R L +
Sbjct: 382 QNLSTFSSHMVNIVDILSKITDQDLVLFDELGAGTDPTEGAALAMTIIDKMRERGILTMA 441
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY L + NA EF LETL PTY + G+ G SNA I++ +G IQ
Sbjct: 442 TTHYNQLKVYALETPGVANAGMEFDLETLSPTYHLRIGTPGKSNAFEISRRLGLGEDYIQ 501
Query: 447 RAQKLVERLRPERQQHRKSELYQSLME----ERRKLESQARTAASLHAEIMDLYREIEDE 502
A+ + H S ++ ++E ER+ L + + + EI L ++ E
Sbjct: 502 AAKSFI---------HSDSLKFEDVLEGLERERQDLSRKNQAEEAKQREIEALKARLQRE 552
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN--------------QLRDASA 548
+ +R+ + + ++ ++ L AK Q D + + ++ Q R+
Sbjct: 553 VEKSERQRDRILDQANEKAEKILREAKEQADLALLELKDIQASVASQEEKRLQQTRNYLG 612
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+ + SL K+++ + I + RP +D V G+ V KSL K V+E+
Sbjct: 613 ENLRSLSKKNKKGL-VIEKVARPIEDVKV------------GDTVFSKSLQQK-GQVLEL 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
P VLVQ G +++ + P+ N Q+E R G ++
Sbjct: 659 PDKQGNVLVQLGILKMSL------PV---------NSLTYAESQEEAR-----GRVQTKS 698
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
+ + K LDLRG EEA QL+ I A S + +IHG GTG ++E+V
Sbjct: 699 MISKKSKNFKTELDLRGQTFEEAKSQLEKYIDDAYLSGMSSVRIIHGKGTGALREKVRNF 758
Query: 727 LRNHPRVAKYEQESPMN---YGCTVAYI 751
L+++ V K E ++ MN YG T+AY+
Sbjct: 759 LQHYQPVKKIE-DAKMNEGGYGVTIAYL 785
>gi|167747774|ref|ZP_02419901.1| hypothetical protein ANACAC_02495 [Anaerostipes caccae DSM 14662]
gi|167653136|gb|EDR97265.1| MutS2 family protein [Anaerostipes caccae DSM 14662]
Length = 799
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 225/713 (31%), Positives = 347/713 (48%), Gaps = 95/713 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR K + + S L + + + L+T R R C+ +K +
Sbjct: 145 ISDDASSALKDIRRNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ G+ + SSSG+T F+EP V NN L E E ILSLL+ + +
Sbjct: 205 RGQFK-GMIHDQSSSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILSLLSEQASYDMD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ ++ +D FA+A +A+ +G PI D INI+ +HPLL
Sbjct: 264 GLAQNQKLLVLLDFIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K VPI++ + ++VITGPNTGGKT
Sbjct: 312 ---------DPKK--------------------VVPINVSLGDAFSMLVITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I+
Sbjct: 343 SLKTVGLFTLMGQAGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSII 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ R SLVL+DE+ GTDP EG ALA SIL L DR + TTHY++L
Sbjct: 403 QNAHRHSLVLLDELCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTDGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II A ++ +
Sbjct: 463 ENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDNHIIVHASDQIDESVKD----- 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++++ + LE +T EI + +EIE+ K L R ++K K + +++
Sbjct: 518 ----FETILAD---LEKSKQTIEQEQEEIFEYRKEIENLRKSLKERQENIKEKREKLLRE 570
Query: 524 E-------LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ AK D ++++ N L+ S + N ++ S + + R + D +
Sbjct: 571 AREEAYRIISEAKETADETIKEY-NNLKKQSGKDANRKMEHMRSDLRG--KMSRLEKDMA 627
Query: 577 VSETNTSS--FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
N +S P Q G++V+V SL TV +P + VQ G MR +V ++
Sbjct: 628 YRSKNRASKKHEPGDFQVGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKVNVKDL 686
Query: 632 ---RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + KR+NA N A R SG + N+ +S P + ++ GM V
Sbjct: 687 EITKSVKQVKRENARNEA---------RNSGRT-AINKSSSIRPEI-------NVLGMTV 729
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 736
+EA QLD I AC + + VIHG GTG +++ + L+ L+ R++ Y
Sbjct: 730 DEAVSQLDKFIDDACLANLGQITVIHGKGTGALRKGIHNYLKTLKKQKRISGY 782
>gi|15895607|ref|NP_348956.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum ATCC 824]
gi|337737556|ref|YP_004637003.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
gi|38604976|sp|Q97GM6.1|MUTS2_CLOAB RecName: Full=MutS2 protein
gi|15025349|gb|AAK80296.1|AE007734_10 DNA mismatch repair protein mutS, YSHD B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|336292751|gb|AEI33885.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
Length = 788
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 350/702 (49%), Gaps = 85/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKA 101
I D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA
Sbjct: 145 ISDKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 201 EYKAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKS 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 260 IVAVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+P K VP++I + E +VITGPNTGGK
Sbjct: 310 -----------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 399 IIDDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K + + E +
Sbjct: 459 NVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE- 517
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 518
+L Q+L K E R A L + + E++ + +A H +E
Sbjct: 518 ----DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREA 573
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+++ +E AK + D +++D R + E ++ES + + + ++ ++S
Sbjct: 574 KKIIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNIS 628
Query: 579 ETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
E + GE+V + SL K V+ V +Q G M++ VK ++R N
Sbjct: 629 ERDQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN 687
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
NP + K + R++ +++ S+DLRG+ EEA ++ D
Sbjct: 688 -------NPISKKEKAVKKREA------------RLNLKSVAQSIDLRGLDSEEAIYKTD 728
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
I L A + VIHG GTGV++ + +L+ + V Y
Sbjct: 729 IYLDEAYMAGLGSVTVIHGKGTGVLRNAINTMLKKNSHVKSY 770
>gi|224476251|ref|YP_002633857.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus carnosus subsp. carnosus TM300]
gi|254766600|sp|B9DPU2.1|MUTS2_STACT RecName: Full=MutS2 protein
gi|222420858|emb|CAL27672.1| MutS2-like protein [Staphylococcus carnosus subsp. carnosus TM300]
Length = 782
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 232/762 (30%), Positives = 367/762 (48%), Gaps = 119/762 (15%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
Y L E + LT+L ++I C + D AS +L+ IR+ +R +NLD
Sbjct: 118 YPILDERMAQLPILTDLYQEI--HQKCDAYDLFDDASHELQSIRSRIHSTSQRIKQNLDR 175
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++K + Q + +IT R R + +KA ++ +GI + SSSG T ++EP
Sbjct: 176 IVKSQSNQ----KKLSDAIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSA 230
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQW 187
VE NN RL N E E ILS+L+ E+A +E + + + V+ +ID A+A + Q
Sbjct: 231 VVEMNNKISRLRNDEKVEVERILSVLSGEVA-AEADACLIAESVMGQIDFLTAKARYGQS 289
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + + +V + HPLL + +N+ D++
Sbjct: 290 IKGTKPEFTEERNVYLPKAF------HPLL------DRATVVANTIEFAEDIQ------- 330
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +PA +
Sbjct: 331 ----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGS 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L FD + DIGD QS+EQ+LSTFS H+ IV+IL+ SL+L DE+G+GTDPSEG
Sbjct: 369 KLSVFDNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGA 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL +++ L + TTHY +L NA+ EF + L PTY++L G G
Sbjct: 429 ALAMSILDHVQKLGSLVMATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGVPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ------ 481
SNA I+ +G II+ A+ L+ + + + + SL +K+E Q
Sbjct: 489 RSNAFEISSKLGLSGNIIREAKSLI-----GQDEQEINNMIASLETNAKKVEDQRIELDR 543
Query: 482 -ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 540
R A +H ++ Y + ++ K L A K K Q+V+ A + D +++D
Sbjct: 544 LLREAKQVHGDLNKKYEQYQNYEKQLMDDA---KVKANQRVKA----ATKEADDIIKDLR 596
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTP-----QFGEQVH 594
+ DE N+ +KE E ++E + D+ + ++ + Q G++V
Sbjct: 597 HM-----RDEKNAEVKEHE-----LIEKRKHLDEQYEGTDIKQNVKKQKWDEIQAGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V + G K V+E+ DDD +VQ G +++++ PI + ++K A P
Sbjct: 647 VLTYGQK-GEVLEIL-DDDEAVVQMGIIKMKL------PIADLEKKKKAQEKP------- 691
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+ + +N A K LDLRG R EEA LD L A + +++IH
Sbjct: 692 ---AKTVSRTNRSA--------VKMELDLRGYRYEEAITALDQYLDQAMLSNYENVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H VA + P +G TVA +K
Sbjct: 741 GKGTGALQKAVQQHLKKHKNVASFRTGMPSEGGFGVTVAELK 782
>gi|386040047|ref|YP_005959001.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|343096085|emb|CCC84294.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 789
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 235/744 (31%), Positives = 368/744 (49%), Gaps = 98/744 (13%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H +P+ LL L+E LE I CID + LD AS +L IR E + R
Sbjct: 109 LHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSASTELSQIRRELRSGEVRI 167
Query: 63 MENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E LDS+++ +++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA +A+ + Y +D + +D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A+ M P+++ + ++ +HPL+ PL+
Sbjct: 282 ARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PLEQ---- 315
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++
Sbjct: 316 ---------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+DE+G+GT
Sbjct: 361 PVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G +I+ A+ V + R + SL + R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRVEHMIASLEQNRLTAEQE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A L E+ L + E LD+ L+++ + +++ + A+V +D + E
Sbjct: 536 REKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEKAEDEARVLVDKARSEAEK 588
Query: 542 QLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
+ D A E + +KE + IAA E + T S T + G++V
Sbjct: 589 IITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTAKRSITTRTRSIMAGDEVS 647
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V SL K VVE+ G + + VQ G M+++V +++ + + A APR++K
Sbjct: 648 VHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL-----QPAQTTAPRVQKP-- 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+G + ++ ++ LDLRG VEEA ++D + A + +++IH
Sbjct: 699 --VTGVKRTRDDNV---------RSELDLRGANVEEALMEVDRFMDEAFLANLGQVYIIH 747
Query: 713 GMGTGVVKERVLEILRNHPRVAKY 736
G GTGV++ + E LR H V Y
Sbjct: 748 GKGTGVLRTGIQEYLRKHKHVKSY 771
>gi|416124432|ref|ZP_11595428.1| mutS2 protein [Staphylococcus epidermidis FRI909]
gi|319401542|gb|EFV89752.1| mutS2 protein [Staphylococcus epidermidis FRI909]
Length = 782
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 236/758 (31%), Positives = 370/758 (48%), Gaps = 109/758 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM---EERRKLESQAR 483
G SNA +I+K +G II +A+ ++ E +S L Q+L ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIES-LEQNLKRVDQQRIELDRLVR 546
Query: 484 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N L
Sbjct: 547 EAQQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-L 598
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSL 598
RD E +KE E I + + DD + V ++ G++V V S
Sbjct: 599 RDYKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSY 650
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 651 GQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR-- 700
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
QT K LDLRG R EEA ++LD L A + +++IHG GT
Sbjct: 701 ----------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGT 744
Query: 717 GVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G +++ V + L+ H V ++ P +G TVA +K
Sbjct: 745 GALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|401565428|ref|ZP_10806266.1| MutS2 family protein [Selenomonas sp. FOBRC6]
gi|400187177|gb|EJO21373.1| MutS2 family protein [Selenomonas sp. FOBRC6]
Length = 785
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 345/710 (48%), Gaps = 105/710 (14%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R + L ++L A Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITRELHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + SSSGAT F+EP VE NN+ ++ + E IL L+ EIA+S
Sbjct: 200 EYRNYFP-GVIHDQSSSGATLFVEPLATVELNNIVRQMGLAREQEIQRILQKLSGEIAQS 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + + EIDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 259 AAILAENCEILAEIDLIFARAGLAREMEAYPPTLNR------DGIVQLKRARHPLL---- 308
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
SK D VPIDI++ +++ITGPNTGGK
Sbjct: 309 ----------------------------SK---DKVVPIDIELGKNFSILLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L++++G +LP LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ + L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L T
Sbjct: 398 IIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQT 457
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF L+TLRPTYR+L G G SNA +I++ +G ++I+ RA+ V ++
Sbjct: 458 GVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------EE 511
Query: 462 HRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E + L +E++ E + R EI + + E + L L K ++
Sbjct: 512 HTHFERVVNELEQEKKDYEIRNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREE 571
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES-----ESAIAA-------IVEA 568
+ A+ + ++ ++Q D E I+E+ E+ + A + +
Sbjct: 572 ANNIVREARRSAEETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPARTVRSTPVGKP 631
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
RPDD Q G+ V++ SL + TV+ V G + + VQ G +R VK
Sbjct: 632 MRPDD-------------IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVKM 675
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ R + KRK P ++R +A S + A P++ D+RGM V
Sbjct: 676 SACRFV---KRKAQKPPVEKVRV--------AASISRKAAEIRPQI-------DVRGMTV 717
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EA L I A + S + +IHG GTG +++ + E L++H V +
Sbjct: 718 SEAESVLGKFIDDAVFTGLSKILLIHGKGTGALRQGLQEYLKHHRSVLSF 767
>gi|431792234|ref|YP_007219139.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782460|gb|AGA67743.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 789
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 226/745 (30%), Positives = 355/745 (47%), Gaps = 107/745 (14%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK- 85
+EE+I CI D + + D+AS L E +R + L S +++ I + K
Sbjct: 131 IEEEISRCITEDGQ---VADQASPLL----TELRRGIGRLQSRIRETLEGIIRNPSYQKI 183
Query: 86 ---PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
P+IT+R R V +K ++ GI + S+SGAT F+EP V N +
Sbjct: 184 LQDPIITQRSERYVVPVKQEYRQAF-QGIVHDQSASGATLFIEPMTVVNLGNELREVILK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL LL+A + I + + +D A+A ++ M+ PIL+ + +S
Sbjct: 243 EQREVQRILLLLSARVEGEVEAIAETHEALARVDFILAKAHLSEGMNAGAPILTDKQEIS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPLL G VP+ I
Sbjct: 303 LVQA------RHPLLTGKV------------------------------------VPLTI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ VV+TGPNTGGKT ++KTLGL + M++ GL++PA++ R+ F I ADIGD
Sbjct: 321 ELGTRFDTVVVTGPNTGGKTVALKTLGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I+E SL+L+DE+G+GTDP+EG ALA +I+ L +R
Sbjct: 381 QSVEQSLSTFSGHMRNIVEIVEKADERSLILLDEVGAGTDPTEGSALAMAIIAQLHERGS 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L R ENA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 441 RIVATTHYGALKNFAYNTPRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
+++ RA+ V ER+ ++L ++L + +R+++ + R A I ++++
Sbjct: 501 EVLVRARTYV----TEREMQ-VADLIENLEDTQREIDFEKRRAREERQIIEIESLGLKEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ L+ L AK Q + + A+ + + ++ DE+ +KE
Sbjct: 556 SQKLEDEYQGLMAKAKDQATEIVREARREAERLI------------DELKLALKEDRKDQ 603
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTP-----------QFGEQVHVKSLGDKLATVVEVPGD 611
A+ A + S S TS P + G+ V++ L K V+++P
Sbjct: 604 QAVDRARQGIRKLS-SRVGTSDSQPRASEGVNPEDLKLGQMVYMTKLRQK-GQVLKLPNS 661
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+LVQ G +++ V + I RL K+++ +S + S +
Sbjct: 662 SGEILVQAGVIKLNVPLSEI----------------RLEKEEKPTRSTRSVISQRKGDM- 704
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+ +T + +DLRGM VEEAS +LD L A ++VIHG GTG ++ + E LR
Sbjct: 705 KKAETLRTEIDLRGMMVEEASFELDKYLDDAVLTGVGQVYVIHGKGTGALRNGIQEFLRG 764
Query: 730 HPRVAKYE--QESPMNYGCTVAYIK 752
H V + Q + G TV ++
Sbjct: 765 HHHVKSFRIGQHGEGDLGVTVVELR 789
>gi|399046291|ref|ZP_10738749.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|433543508|ref|ZP_20499913.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
gi|398055652|gb|EJL47713.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|432185182|gb|ELK42678.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
Length = 785
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 229/730 (31%), Positives = 358/730 (49%), Gaps = 109/730 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L ELE +I CID ++D AS +L +R E + R E LD + + + Q
Sbjct: 128 LRELEMEIRRCIDENG-DVMDSASMELRQVRQEIRQVESRIREKLDQMTRSSSYQKM--- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ + ++T R R + +K ++++ GI + S+SGAT F+EP+ V NN L
Sbjct: 184 -LMENIVTIRGDRFVIPVKQEYRHVF-GGIVHDQSASGATLFIEPEVIVSMNNKLRELRL 241
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL LLT ++A + + +D + E+D FA+A A M VCP L+ + +
Sbjct: 242 REEREVERILYLLTEQVAFAVDALVENVDALTELDFMFAKAQLAWSMKAVCPKLNDRGY- 300
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+N++ +HPL+ P + VP+D
Sbjct: 301 -----LNMKKARHPLI----------------P-------------------REVVVPVD 320
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ E + +V+TGPNTGGKT S+KT+GL SLM+ AGL++PA+ + F + ADIGD
Sbjct: 321 VELGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMAMAGLHIPAEEESEMTVFSSVFADIGD 380
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ I+ ILE + +SLVL DE+G+GTDP+EG ALA SI+ ++ D
Sbjct: 381 EQSIEQSLSTFSSHMKNIISILEKMDAKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSG 440
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY++L NA+ EF ++TLRPTYR+L G G SNA IA+ +G
Sbjct: 441 ARLVATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLVGVPGRSNAFAIARRLGLP 500
Query: 442 RKIIQRAQ-------KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM- 493
II+ A+ VE + +++RKS L + E++
Sbjct: 501 EAIIEVARGSISEEDNQVESMIASLERNRKSAEADRLAAAAARKEAEELRRQLEEERARF 560
Query: 494 -----DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
L EDEA R A L +E + + +EL + D V+ E++L DA
Sbjct: 561 AEEKNKLMERAEDEA----RIAVQLAKEEAETIIRELREMR---DEGVEIKEHRLIDAKK 613
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N++++ + + +A R + + G++V V S G K TV+E
Sbjct: 614 RLGNAVLELEKEKVKKPAKAVR-------------ATQIKVGDEVMVTSFGQK-GTVLEK 659
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+D+ LVQ G M+++V++ ++ + +K A P +++
Sbjct: 660 VNNDE-FLVQIGIMKMKVRREDMNVQNSITQKPQAAPYTSVKR----------------- 701
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
R + K LDLRG VE+A ++D L A + +IHG GTGV+++ V E
Sbjct: 702 ----RTASIKMDLDLRGYNVEDAIREMDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEY 757
Query: 727 LRNHPRVAKY 736
LR+H V +
Sbjct: 758 LRSHRNVKSF 767
>gi|116072695|ref|ZP_01469961.1| MutS 2 protein [Synechococcus sp. BL107]
gi|116064582|gb|EAU70342.1| MutS 2 protein [Synechococcus sp. BL107]
Length = 779
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 239/744 (32%), Positives = 383/744 (51%), Gaps = 80/744 (10%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 74
L++ L +LE+++ F ++ + + DRAS L +R + R+ + L L ++ A
Sbjct: 106 LIETMVTLPDLEQRLKFSLE-EGGRVADRASPPLAGLRQQWHGLRQERRDKLQELTRRYA 164
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ F + +I +R R + +KA + G + S+SG T F+EP+ + N
Sbjct: 165 S--F----LQDSVIAQRHGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGN 217
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
V + EE +L+ L+ +A+ E + L++ +L +DLA AR + +W+ V P
Sbjct: 218 KLVDIEARIRKEEQRVLAELSDLVAQDEPVLNSLVEILLALDLALARGRYGRWLGAVPPN 277
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
LS F + ++HPLL+ RS + +P+
Sbjct: 278 LSEDPEAPF----LLRDLRHPLLIWQHKRS------SGSPV------------------- 308
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPI + V + RVV ITGPNTGGKT S+K+LGLA+LM++AG+ LP P LPW
Sbjct: 309 ---VPISVDVSAQLRVVAITGPNTGGKTVSLKSLGLAALMARAGMLLPCSGQPSLPWCPQ 365
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALAT 371
+LADIGD QSL+Q+LSTFSGHI RI IL + +LVL+DE+G+GTDPSEG ALAT
Sbjct: 366 VLADIGDEQSLQQSLSTFSGHIKRIGRILHALESGPAPALVLLDEVGAGTDPSEGTALAT 425
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
++L+ L DR L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNA
Sbjct: 426 ALLKALADRARLTIATTHFGELKALKYSDDRFENASVAFNAETLSPTYELLWGIPGRSNA 485
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IA +G D ++ +AQ L+ + + + Q L +R++ ++ A AA+L A
Sbjct: 486 LAIATRLGLDAGVLDQAQALLA----PAAEGEVNTVIQGLEAQRQRQQAAAEDAAALLAR 541
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ E+ + ++ A + + Q+++Q + + ++ ++++ +LRD AD
Sbjct: 542 TELLHEELLLRWQKQKQQTALHQEQGRQRLEQSIREGQNEVRSLIR----RLRDDRAD-- 595
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
+++ + + + HRP + + P+ GE+V + +L K A V+ + D
Sbjct: 596 GETARKAGQRLRKLEDHHRPTKE---KRAPKPGWRPEVGERVRLLALA-KAAEVLAISDD 651
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V+ G MR V+ N + + RK + + G
Sbjct: 652 GLQLTVRCGVMRSTVELNAVESLDG-------------RKAEPPPVPVVKVQARSGLGAG 698
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+V+TS+N+LD+RGMRV EA ++ L + L+VIHG+GTG +K + L P
Sbjct: 699 AQVRTSRNTLDIRGMRVHEAESTVEEQLR--NANGPLWVIHGIGTGKLKRGLRAWLDTVP 756
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
RV EQ GC+V +++
Sbjct: 757 YVERVVDAEQ-GDGGPGCSVVWVR 779
>gi|420198949|ref|ZP_14704633.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
gi|394272635|gb|EJE17085.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
Length = 782
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 232/762 (30%), Positives = 369/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ K L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAVLK 782
>gi|160945171|ref|ZP_02092397.1| hypothetical protein FAEPRAM212_02690 [Faecalibacterium prausnitzii
M21/2]
gi|158442902|gb|EDP19907.1| recombination and DNA strand exchange inhibitor protein
[Faecalibacterium prausnitzii M21/2]
Length = 804
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 224/714 (31%), Positives = 346/714 (48%), Gaps = 117/714 (16%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IRA + L+S+++ + + + + +++ R R V +K+ ++ + GI +
Sbjct: 158 IRATENSIRDRLESMVRNMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y +LE
Sbjct: 213 VSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLE 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID+ A+A A + P V DSS N+ +HPL+ +P
Sbjct: 273 IDILLAKARLALELKAFKP------AVRTDSSFNLIRARHPLI---------------DP 311
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
K VP+DI + E ++ITGPNTGGKT ++KT GL M
Sbjct: 312 QKC--------------------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+
Sbjct: 352 AQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLL 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+ EF LET
Sbjct: 412 DELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLET 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTY++ G G SNA I++ +G ++I+ AQ Q L E
Sbjct: 472 LRPTYKLSVGVPGKSNAFLISEKLGIPSRVIEAAQ-------------------QHLSAE 512
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNF 527
++L++ L ++ +E ++E + L A+H L+A QQ + EL
Sbjct: 513 DKRLDAVLGQLDDLKLQL----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEA 568
Query: 528 AKVQIDTVVQDFENQ-------LRDASADEINS-----------LIKESESAIAAIVEAH 569
A+ + T+ Q E Q LR DE S KE+E A H
Sbjct: 569 ARAKARTLAQQVETQAYALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVH 628
Query: 570 RPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
P F P + G++V + L ++LATV+ +P + VLV+ G ++ +
Sbjct: 629 NP----------VKEFVPLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTK 677
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ-TSKNSLDLR 684
V ++ P K + AP+ + QQ R S G +N RVQ T+K +L
Sbjct: 678 VPLKGLKQ-PEKLVKEST--APKTKAQQ--RYSRLTGDTNRPNGRVERVQRTAKMECNLL 732
Query: 685 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G+ V+EA ++D I A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 733 GLTVDEALSEVDSFIDRAILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 786
>gi|295105593|emb|CBL03137.1| MutS2 family protein [Faecalibacterium prausnitzii SL3/3]
Length = 804
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 224/714 (31%), Positives = 346/714 (48%), Gaps = 117/714 (16%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IRA + L+S+++ + + + + +++ R R V +K+ ++ + GI +
Sbjct: 158 IRATENSIRDRLESMVRNMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y +LE
Sbjct: 213 VSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLE 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID+ A+A A + P V DSS N+ +HPL+ +P
Sbjct: 273 IDILLAKARLALELKAFKP------AVRTDSSFNLIRARHPLI---------------DP 311
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
K VP+DI + E ++ITGPNTGGKT ++KT GL M
Sbjct: 312 QKC--------------------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+
Sbjct: 352 AQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLL 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+ EF LET
Sbjct: 412 DELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLET 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTY++ G G SNA I++ +G ++I+ AQ Q L E
Sbjct: 472 LRPTYKLSVGVPGKSNAFLISEKLGIPSRVIEAAQ-------------------QHLSAE 512
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNF 527
++L++ L ++ +E ++E + L A+H L+A QQ + EL
Sbjct: 513 DKRLDAVLGQLDDLKLQL----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEA 568
Query: 528 AKVQIDTVVQDFENQ-------LRDASADEINS-----------LIKESESAIAAIVEAH 569
A+ + T+ Q E Q LR DE S KE+E A H
Sbjct: 569 ARAKARTLAQQVETQAYALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVH 628
Query: 570 RPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
P F P + G++V + L ++LATV+ +P + VLV+ G ++ +
Sbjct: 629 NP----------VKEFVPLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTK 677
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ-TSKNSLDLR 684
V ++ P K + AP+ + QQ R S G +N RVQ T+K +L
Sbjct: 678 VPLKGLKQ-PEKLVKEST--APKTKAQQ--RYSRLTGDTNRPNGRVERVQRTAKMECNLL 732
Query: 685 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G+ V+EA ++D I A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 733 GLTVDEALSEVDSFIDRAILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 786
>gi|291542202|emb|CBL15312.1| MutS2 family protein [Ruminococcus bromii L2-63]
Length = 787
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 224/702 (31%), Positives = 352/702 (50%), Gaps = 89/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
I D+AS L IR R + S ++V +I + K L +T+R R V +
Sbjct: 142 ISDKASPVLSDIR----RKIRTASSKAREVLDKIIHSSTYIKYLQDTIVTQRDGRYVVPV 197
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
++ + +P G+ + SSSGAT F+EP G V+ NN L + E E IL L+A
Sbjct: 198 RSECRGNVP-GLVHDTSSSGATVFIEPMGVVQANNDIKLLQSKEEQEIERILFELSANAG 256
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
I + +++++L FA+A A M PI++ + + + +HPL+
Sbjct: 257 DFADSIIHSYKNLVQLNLIFAKADLAYSMKASKPIMNDRGMIELKQA------RHPLI-- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ N + VP+D+ + E +VITGPNTG
Sbjct: 309 -----------DKNKV----------------------VPVDVMLGKEFDTLVITGPNTG 335
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM+ GL +P ++ L F +L DIGD QS+EQ+LSTFSGH++ I
Sbjct: 336 GKTVTLKTIGLLTLMAMCGLLVPCADNSELSVFRRVLVDIGDEQSIEQSLSTFSGHMTNI 395
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I++L + SL LIDE+G+GTDP EG ALA +IL+ LRD+ TTHYA+L +
Sbjct: 396 VQIIKLANAGSLCLIDELGAGTDPVEGAALAIAILERLRDKHAKIASTTHYAELKEFALR 455
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
EN + EF + TL+PTYR+L G G SNA I+K +G D +II RA +LV
Sbjct: 456 TPGVENGSCEFDVATLKPTYRLLIGVPGKSNAFAISKRLGIDDEIISRASELVS------ 509
Query: 460 QQHRKSELYQSLMEERRK-LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
++R+ E +E+RR+ LE Q A L A+ ++ E+E + +RA K
Sbjct: 510 NENRQFEDVVEKLEKRRQSLEKQLENANRLTAKANTEKQKAENEMQKAKQRAEREIEKAR 569
Query: 519 QQVQQELNFAKVQIDTVVQDFEN--QLRDASADEINSL---IKESESAIAAIVEAHRPDD 573
Q+ Q+ ++ + Q D V ++ E + +D S L I + E+ + + PD+
Sbjct: 570 QEAQRIISRTRAQADAVAEELEKARKAKDMSVQARTQLKKNIDKMEAHADPVKARNTPDE 629
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ + + G+ V + + DK ATV+ P D VLVQ G ++ RV N+R
Sbjct: 630 EYKLPR------PLKVGDTVLIYDI-DKNATVLAPPNKDGVVLVQAGIIKTRVDIKNLRL 682
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ ++ + PA +DR S + N + R +T +D+RG +A +
Sbjct: 683 LKSNNK-----PA-------KDRFS---STRNVPSRMDVRPET---EVDVRGETAFDAIN 724
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+D A+ A S + +IHG GTGV+K + + L+ + V
Sbjct: 725 IVDKAIDNAVLSGVSKMTIIHGKGTGVLKREINKYLKTNKAV 766
>gi|238926801|ref|ZP_04658561.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
gi|238885333|gb|EEQ48971.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
Length = 785
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 231/734 (31%), Positives = 355/734 (48%), Gaps = 94/734 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI----RAERKRNMENLDSLLK 71
L EL + L LE + ID + D AS L I R + R + L S+L
Sbjct: 115 LKELARRIEILGMLERNLKAAID-EYGNFRDDASPVLHRITNELRTAQSRVKDRLSSVLH 173
Query: 72 KVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A Q +FQ + ++T R R + +K ++ P G+ + S+SGAT F+EP V
Sbjct: 174 DAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIHDQSASGATLFIEPLAIV 227
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN ++ + E I+ LT EIA+S + + ++DL FARA A+ M
Sbjct: 228 ELNNTVRQMGIAREQEILRIMQRLTGEIARSADILSANCTILSDLDLIFARASLAREMRA 287
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
PIL+ +V + +HPLL PL
Sbjct: 288 YPPILNRDGYVYLRRA------RHPLL----------------PL--------------- 310
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VPIDI + ++ITGPNTGGKT SMKTLG+ +LMS++G +LPA++ +P
Sbjct: 311 ----DKVVPIDIALGKTFSTLLITGPNTGGKTVSMKTLGILALMSQSGCFLPAESGSEIP 366
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+ I ADIGD QS+EQ+LSTFS H IV I++ + LVL+DE+G+GTDP EG ALA
Sbjct: 367 VYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATSGDLVLLDEVGAGTDPDEGAALA 426
Query: 371 TSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
SI++ +L +R+ V TTHYADL ENA+ EF L+TLRPTYR+L G G S
Sbjct: 427 RSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDLKTLRPTYRLLIGIPGAS 485
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS-----ELYQSLMEERRKLESQART 484
NA +I++ +G +I+ RA++ V E H ++ E +++ EE+ +L + T
Sbjct: 486 NAFSISRQLGLSEEIVARAEEYVS----EDHAHFETVVHDLECAKTIYEEKNQLLYKKET 541
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
E + R +++K + H +E + +E A+ + ++ + Q
Sbjct: 542 DIGRAEERLRAERAAFEQSK---KELFHKAREEANNIVRE---ARRIAEETIKSLKEQFD 595
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
D E I E+ S + P + S+ + + Q G+ V++++L + T
Sbjct: 596 DHGIKERQKAIHEARSRLNETYIHDMPQKNPSIGK-DIHPGDVQIGDTVYIRTLAQE-GT 653
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + G++ T VQ G +R VK + I + +RKN N + S +
Sbjct: 654 VLSLQGEELT--VQVGGLRTIVKMSACSFIGHRERKNHVN-----------KVHASGAMT 700
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
+ A P++ D+RGM V EA L+ I A + S + VIHG GTG ++
Sbjct: 701 KKAAEIRPQI-------DVRGMTVYEAESVLEKFIDDAVFSGLSTVLVIHGKGTGTLRLG 753
Query: 723 VLEILRNHPRVAKY 736
+ + + H V +
Sbjct: 754 LWDYFKRHCSVCSF 767
>gi|312622156|ref|YP_004023769.1| muts2 family protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202623|gb|ADQ45950.1| MutS2 family protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 787
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 215/714 (30%), Positives = 359/714 (50%), Gaps = 108/714 (15%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR ++ R +EN L+S+++ Q F + +P+IT R ++ +
Sbjct: 142 ILDTASSKLKEIR-DKIRKLENKIRDELNSMIRDPKIQRF----LQEPIITIRGEKLLLP 196
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+KA + + GI + S++GAT F+EP VE +N L N E E IL +++ I
Sbjct: 197 VKAEFRNEVK-GIIHDQSATGATLFVEPFVCVEISNQIRILKNKEKEEIERILQEISSLI 255
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A EI+ ++E+D+ F +A +A+ M+ PI+++ IN++ +HPL+
Sbjct: 256 ASYCEEIETSFYALVELDIVFTKAIWAKEMNASKPIINASG------IINLKKARHPLIQ 309
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
D VPIDI + + V++ITGPNT
Sbjct: 310 -----------------------------------KDKVVPIDIHLGKDFDVLIITGPNT 334
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT+GL L+ ++G+++PA L F I ADIGD QS+ Q+LSTFS H+
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I++I + ++LVL+DEIG+GTDP EG ALA +IL+YL ++ + TTHY +L
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGELKIFAQ 454
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----QKLV- 452
++ RFENA+ EF ++TL+PTYR+L G G SNAL I+ ++G D+ I++ A QK +
Sbjct: 455 QENRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTID 514
Query: 453 -ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
+R+ E +Q +K + ++ K E+QA AA E+E K +
Sbjct: 515 LDRIINEMEQKKKEAEENLELAQKLKHEAQALKAA------------YEEEKKRFETERE 562
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDF----ENQLRDASADEINSLIKESESAIAAIVE 567
++ K + ++ + ++ +I+ + +D EN E+ +E E I +I +
Sbjct: 563 RIRKKAINEAKEIVERSQYEIENLFKDLRKLAENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + + S+T + + G++V+V+S D V +P + VQ G M++ V
Sbjct: 623 QEKQEAE---SKTKKTIQNLRLGQKVYVRSF-DAEGFVESLPDSKGNLTVQIGIMKINVN 678
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLR 684
++I + + +D + S N + KN S+D+R
Sbjct: 679 LSDIEEV-----------------EGQDSKIYQIASRN-------VIIKEKNIDMSIDVR 714
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G ++A ++D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 715 GKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 768
>gi|383754385|ref|YP_005433288.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381366437|dbj|BAL83265.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 792
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 243/757 (32%), Positives = 377/757 (49%), Gaps = 99/757 (13%)
Query: 14 SPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDS 68
SP+L E ++ L +LE + ID + D AS +L IR E K R + +++
Sbjct: 112 SPILQEWARSLEILGQLERNLNNVIDEHGNMRED-ASVELRRIRRELKSSQTRIKDKINA 170
Query: 69 LLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+L A Q +FQ ++T R R + +KA ++ P G+ + S+SG+T F+EP
Sbjct: 171 ILHDGAYQKMFQ-----DAIVTVRDERYVIPVKAEYRAHFP-GLIHDQSASGSTLFIEPM 224
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN +L+ +E E IL L+ EI + + + + + +ID FA+A A
Sbjct: 225 AVVELNNDVKQLTLAEQQEIQRILRQLSGEIQREKETLSANCEILGDIDFTFAKARLANA 284
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
M V P+L+ + ++ +HPL+
Sbjct: 285 MKAVRPLLNEEGRTVLSNA------RHPLI------------------------------ 308
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
D VP I + + R+++ITGPNTGGKT +MKTLGL LM++AGLYLP
Sbjct: 309 -----AVDKVVPTTISIGQDYRMLLITGPNTGGKTVTMKTLGLLVLMAQAGLYLPVDQGS 363
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+ + I ADIGD QS+EQ+LSTFS H++ IV IL+ V + L+L+DE+G+GTDP EG
Sbjct: 364 EIALYANIYADIGDEQSIEQSLSTFSAHMTHIVSILDKVESDDLLLLDELGAGTDPEEGA 423
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL+ L + + TTHY++L ENA EF +ETLRPTYR+L G G
Sbjct: 424 ALAMSILEKLLEVQATTIATTHYSELKTFAYTREGIENACVEFDIETLRPTYRLLIGIPG 483
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-YQSLMEERRK---LESQAR 483
SNA I+K +G +I RAQ+LV + + +H +EL + +M E+R E QAR
Sbjct: 484 ASNAFAISKRLGLADSLILRAQQLV-KADHAQFEHVINELENEKMMYEQRNADIAERQAR 542
Query: 484 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
L +++ E+ + D+ R+A A +Q ++E ++ NQL
Sbjct: 543 V-KKLEEKLLKAKEELSQKKGDIIRKAKDKSAALIRQTRRE-----------SEEVINQL 590
Query: 544 RDASADE-INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----QFGEQVHVKSL 598
++ D+ I + + ++A A I EA + +++ + G+ V+VK L
Sbjct: 591 KEQFDDQGIRARQQAIQNARAKINEASAKANPGIMAQKGVGQRIDLKKIRVGDTVYVKKL 650
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
D+ TV+E+ G D T VQ G +R ++K AN L + E++
Sbjct: 651 -DQKGTVLEIQGKDLT--VQVGALRTKLK---------------ANACTFLAHKVEEKPG 692
Query: 659 GSAGS--SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 714
+ GS +++ S+ + Q +D+RGM V+EA L I A S + +IHG
Sbjct: 693 VNTGSRKNSQSGSFLQKTQNIGRDIDIRGMMVDEAEMTLGKFIDDAVIAGLSQVLIIHGK 752
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
GTG +++ V L+NH V + Q + +N G T A +
Sbjct: 753 GTGALRKGVHAYLKNHRNVLSF-QFADINEGGTGATV 788
>gi|420177446|ref|ZP_14683782.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|420180254|ref|ZP_14686509.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
gi|394247830|gb|EJD93072.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|394251293|gb|EJD96392.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
Length = 782
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 232/762 (30%), Positives = 369/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ K L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|359411145|ref|ZP_09203610.1| MutS2 protein [Clostridium sp. DL-VIII]
gi|357170029|gb|EHI98203.1| MutS2 protein [Clostridium sp. DL-VIII]
Length = 786
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 218/711 (30%), Positives = 364/711 (51%), Gaps = 106/711 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS+ L IR R ++ +S +++ + I ++ + L T R R + +K+
Sbjct: 145 ISDKASQTLYNIR----RTLKEKNSSVREKISSIVKSNSKYLQDDLYTMRGDRYVLPVKS 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT+F+EP V NN L E AE ILS L+ ++ +
Sbjct: 201 EYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSQKVKMN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + ++E+D FA+A +A ++ + PI V+ D + +I +HPL+ G
Sbjct: 260 AEQCLSNLKVLVELDFIFAKAKYASALNAIKPI------VNEDGTFSILSGRHPLIEG-- 311
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
D VP D+ + E + ++ITGPNTGGK
Sbjct: 312 ---------------------------------DKVVPSDVYLGKEFQTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL +M +GL +PA+++ + F+ I ADIGD QS+EQ+LSTFS H++ IV+
Sbjct: 339 TVTIKTVGLLHIMGLSGLLIPARDNSSIALFNEIFADIGDEQSIEQSLSTFSSHMTNIVN 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRSRGAKLIATTHYSELKAYALKTD 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 458
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E L+ E
Sbjct: 459 GVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFEN 518
Query: 459 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
R+ KS + + E R L+ QA + E + E D R A++ A+
Sbjct: 519 LIRELQEKSIIAKQEAREARMLKEQAEELKKKYEEKL--------EKLDNTREKAYMDAR 570
Query: 517 ETQQVQQELNFAKVQIDTVVQDFE--NQLRDASA-----DEINSLIKESESAIAAIVEAH 569
++ ++ ++ AK + D +++ +L +S +E +K+S A +
Sbjct: 571 --REAKEIISNAKDEADEILKAMRELEKLGISSGGRQRLEEERKKLKDSLEAKEKGIHNM 628
Query: 570 RPDDDFSVSETN--TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ ++ ++++ + +F P +QV V SL P + V V+ G M++ VK
Sbjct: 629 KENEGEAITKVSLGMEAFLPSLNQQVIVTSL----------PDNKGEVQVEAGIMKINVK 678
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+++ RK ++RK++E + + S+ S +DLRGM
Sbjct: 679 LSDL-------RKTKVTKEEKVRKKREVKLNLSSVESR---------------VDLRGMD 716
Query: 688 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EEA ++ D L A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 717 AEEACYKADKYLDDAYRANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|125973529|ref|YP_001037439.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281417732|ref|ZP_06248752.1| MutS2 family protein [Clostridium thermocellum JW20]
gi|229486373|sp|A3DE67.1|MUTS2_CLOTH RecName: Full=MutS2 protein
gi|125713754|gb|ABN52246.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281409134|gb|EFB39392.1| MutS2 family protein [Clostridium thermocellum JW20]
Length = 793
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 216/705 (30%), Positives = 347/705 (49%), Gaps = 87/705 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR + + E++ L + I +P++T R R + +K +
Sbjct: 146 IADNASPTLANIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ +P G+ + S+SGAT F+EP VE NN L E AE IL LT EI
Sbjct: 206 RTEIP-GLIHDSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVD 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+K + + +D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 265 SLKSNVSILGRLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ TV VPID + + +V+TGPNTGGKT
Sbjct: 313 ------------------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTV 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL
Sbjct: 344 TLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V +SLVL DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L
Sbjct: 404 KDVDEDSLVLFDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFV 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF++ETLRPTYR+L G G SNA I+K +G II++A++ + + +
Sbjct: 464 ENACCEFNVETLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFL-----TQDDIK 518
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
++ S+ + + E++ A S E L +E+E++ + L L + + ++
Sbjct: 519 FEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARK 578
Query: 524 ELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
L A+ + + ++ Q+ N R A+E+ +K +I +E
Sbjct: 579 ILLEARKEAEEIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LP 631
Query: 577 VSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ N P+ G+ V + +L D+ TV+ P D V+VQ G M++ V +N++
Sbjct: 632 LAPKNALVKPPENLKPGDSVLIVNL-DQKGTVITPPDKDGEVVVQAGIMKINVHISNLKL 690
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ ++K N + G G S + ++ +D+RG +EEA
Sbjct: 691 V--DEQKIVLN----------NSGIGKIGMS--------KAKSISTEIDVRGYNLEEAIE 730
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + + +IHG GTGV++ + + L++ RV +
Sbjct: 731 SVDKYLDDAYLSGLTEVSIIHGKGTGVLRSGIQKFLKSDSRVKSF 775
>gi|390935290|ref|YP_006392795.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570791|gb|AFK87196.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 786
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 209/659 (31%), Positives = 333/659 (50%), Gaps = 84/659 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLVHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ LT E+ + EI M + E+D+ FA+A ++ D PIL+++ +
Sbjct: 243 EIERILAELTDEVGEHADEIYENMVALKELDVIFAKAKYSINTDSTKPILNTKGY----- 297
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
INI+ +HPL+ D VPI + +
Sbjct: 298 -INIKNARHPLIA-----------------------------------KDAVVPISVHLG 321
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + + +FD + DIGD QS+
Sbjct: 322 QSFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADDGSDVAFFDNVFVDIGDEQSI 381
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVNSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + II
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDII 501
Query: 446 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
+ A+ + E LR E ++ + L +R + E+ + L + L E E +
Sbjct: 502 ENAKNYITSEELRFE-------DILRDLENKRTEAENAKQKIEELKRHVESLKDEYEKKV 554
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 562
K+ +R + K ++ ++ L K D ++ +L++A +D N LI+E+ +
Sbjct: 555 KEAEREREKIIEKAREKAKKILEGTKSTADEIIA----KLKEAEKSDRKNKLIEEARLKL 610
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ + +++ SE P+ G+ ++ L D+ T + P D V +Q
Sbjct: 611 KENI--NEIEENLKRSEIPEYKKIPKNVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQA 667
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V +N+R ++++ + G A NE++S + T
Sbjct: 668 GILKMNVHISNLR--------------EAESSEEKEMEKGFAKYINEKSS---NIST--- 707
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+DLRG +EEAS ++D L A + VIHG GTG+++ + +L+ + V +
Sbjct: 708 SIDLRGKTLEEASIEVDKYLDDAYLAGLKQVTVIHGKGTGILRSGITRLLKMNKHVKSF 766
>gi|83590547|ref|YP_430556.1| MutS2 family protein [Moorella thermoacetica ATCC 39073]
gi|83573461|gb|ABC20013.1| DNA mismatch repair protein, MutS family [Moorella thermoacetica
ATCC 39073]
Length = 801
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 217/712 (30%), Positives = 342/712 (48%), Gaps = 95/712 (13%)
Query: 43 IILDRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
++LD+A+ L + +R ++R E LDS L+ Q + + L T R R +
Sbjct: 148 LVLDQATPRLASLRQQVRQAQERIKERLDSYLRSTEMQKY----LQDNLFTIRNDRYVLP 203
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+K +++ +P G+ + S+SGAT F+EP VE NN RL +E E AIL L+ +
Sbjct: 204 VKQEYRHQVP-GLVHDQSASGATLFIEPMALVELNNELRRLQTAEAREVEAILLHLSKLV 262
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ EI + + E+D A+ +Q M V P L++ I +HPLL
Sbjct: 263 GGQKEEILASLAALGELDFTLAKGRLSQAMAAVPPRLNA------GGRWRIRQGRHPLLG 316
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
G VP+ + + + +VITGPNT
Sbjct: 317 GRV------------------------------------VPVSLTLGEDFDTLVITGPNT 340
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT+GL +LM++ GL+LPA + + + ADIGD QS+EQ+LSTFS H+ +
Sbjct: 341 GGKTVTLKTMGLFTLMAQCGLHLPAADGTEVDVTAAVYADIGDEQSIEQSLSTFSAHMRQ 400
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV I+ V SLVL+DE+G+GTDP+EG ALA +IL YL V TTH+++L
Sbjct: 401 IVAIVREVEAGSLVLLDELGAGTDPTEGAALAMAILDYLTGVGARTVATTHFSELKAYAY 460
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R ENAA EF ETL+PTY++L G+ G+SNA +A +G +I++A+ +
Sbjct: 461 ATPRVENAAVEFDSETLQPTYKLLIGTPGESNAFAVAGRLGLPPALIEQARGFL-----S 515
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
+ R S L + L +RR + A SL E +E E ++ ++AA K
Sbjct: 516 EENRRVSRLIEGLTADRRASARERAEAESLRREAEAAREAMEKERREWQQQAARQLEKAR 575
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL-------IKESESAIAAIVEAHRP 571
++ + L A+ ++ ++ E L + S + +KE E + +E ++P
Sbjct: 576 EEARAILRRARYEVRELMARVEKALAEESLRSQQQVLSRARQRLKELEDEVETGMERYQP 635
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
E + G++V + S G ++ V+ P + VLVQ G ++V V +
Sbjct: 636 VAGGQPPEHLRA------GDRVFLASWG-QVGEVISPPNEQGEVLVQVGALKVNVPVKEL 688
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGM 686
R + N +N + + R AG + VQ + N +DLRG+
Sbjct: 689 RLVNNDHHEN---------RTKTRRNVAGAGWT---------VQAAVNDDIRPEIDLRGL 730
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
V EA HQ+D L A + + +IHG GTG ++ + + LR HP V +
Sbjct: 731 TVAEACHQVDEYLDDAVLAGLNRVSLIHGKGTGALRVALQDYLRQHPLVKGF 782
>gi|392423579|ref|YP_006464573.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
gi|391353542|gb|AFM39241.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
Length = 788
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 220/736 (29%), Positives = 358/736 (48%), Gaps = 90/736 (12%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDL-ELIRA---ERKRNMENLDSLLKKVAAQIFQAGG 82
LE++I CI D K + D AS +L EL RA + R E+L+ L+ A Q
Sbjct: 131 LEDEISRCIAEDGK---VADNASPELAELRRAIYRLQNRIRESLEGTLRNPAYQKM---- 183
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ P+IT+R R + IK ++ P GI + S+SGAT F+EP V+ N +
Sbjct: 184 LQDPIITQRSDRYVIPIKQEYRGAFP-GIVHDQSASGATLFIEPMPVVQLGNELREVVLK 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL +L+A++ + L + + ++D A+A + M+ P L + +
Sbjct: 243 EQREVQRILQMLSAQVETRAETVADLHEALAKLDFVLAKANLSVSMNAGAPELVEKQQLK 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ G VP+ +
Sbjct: 303 LIQA------RHPLIGGKV------------------------------------VPLSV 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ +VITGPNTGGKT ++K +GL + M+++GL++PA+++ + F I ADIGD
Sbjct: 321 ELGIGFDTLVITGPNTGGKTVALKVIGLMAAMTQSGLHIPAESNSSMGVFSQIFADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV+I++ SLVL+DE+G+GTDP+EG ALA IL L R
Sbjct: 381 QSVEQSLSTFSGHMKNIVEIIDRSDERSLVLLDEVGAGTDPTEGAALAMGILAELHSRGC 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY L + R +NA+ EF ETLRPTYR+L G G SNA IA+ +G
Sbjct: 441 RTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIARRLGLSE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
+++RA V ER+ ++L ++L E R++E + S + + +E++
Sbjct: 501 GVLERANTFV----TEREMQ-VADLIENLGETHREIELEKEKVQSGRQAVEQQTKALEEK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ LD L ++ + + AK + + ++ + + L+ + + + I+++
Sbjct: 556 SQRLDEDYDLLMTLAKEEAAELVREAKREAEAIIAELKEALKKETKQQQD--IEKARQGF 613
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
I +++ D +V +T + Q G+ V + L K V+++P VLVQ G
Sbjct: 614 RRI--SNKLDKGRAVKQTGSGLSADQIMLGQTVLMTKLRQK-GQVLKLPNASGEVLVQAG 670
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
M+V V ++ + R+ +P + R+ S G E +
Sbjct: 671 IMKVMVPLAELKLV----REEKVSPP------KSSRKGNSLGLQKAE--------EIRAE 712
Query: 681 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE- 737
+DLRGM VEE + LD L A +++VIHG GTG ++ + + LR HP V +
Sbjct: 713 IDLRGMLVEEGTEVLDKFLDDAVLGGIGLVYVIHGKGTGAMRAGIQDFLRGHPHVRSFRL 772
Query: 738 -QESPMNYGCTVAYIK 752
+ + G TV +K
Sbjct: 773 GEYGEGDSGVTVVELK 788
>gi|302854502|ref|XP_002958758.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
gi|300255866|gb|EFJ40148.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
Length = 1442
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 229/674 (33%), Positives = 324/674 (48%), Gaps = 106/674 (15%)
Query: 11 HRYSPLLELLKNCNFLTELEEK-----IGFCIDCKLLIILDRASEDLELIRAERKRNMEN 65
+RY L L + E EE+ I CI K + D ASE L +RAER+ N E
Sbjct: 515 YRYPSLAALAEG----IEEEERTLLRAIRACI--KFGSVCDDASESLAAVRAERQSNKER 568
Query: 66 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFM 124
L ++ A + Q G + + R R CVG+++ + LP G + L+ SSSGAT +M
Sbjct: 569 LRKEVEGWARSMQQRGAAEAGAVAIVRGRFCVGVRSGRQGELPRGSVRLSSSSSGATVYM 628
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP+ V+ NNME L E E +L LL+ + ++ L+ V +DL ARA
Sbjct: 629 EPQPCVDLNNMEAVLGEREEQEVQKVLGLLSKMLGTRVPQLLSLLGSVTSLDLVAARARH 688
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS-NSNPLKSDVE--- 240
++WM P + S +++ G HPLL+ L L A S + N D +
Sbjct: 689 SRWMGATRPEF--EEFGPGASPLHVPGALHPLLMQRGLPPLPQAPSVDDNRFDRDFQAAP 746
Query: 241 -----------------------NSEMTVG---SLSKGISDFPVPIDIKVECETRVVVIT 274
+ +T G ++S S P P+D++V VV IT
Sbjct: 747 AWELRRVVVPDGPRSGELPEYGSTTAVTDGGSATVSGSSSLLPRPLDLRVPPGKAVVAIT 806
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLP--------AKNH----------------PRLP 310
G GKT ++K GL LM++AGL+LP H PRL
Sbjct: 807 G----GKTVTLKAAGLMVLMAQAGLFLPYTAASGISTATHGSPPCPRATTSGLTPRPRLV 862
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFD +LADIGD QSL+QNLSTFSGHI RI IL SLVL+DE+GSGTDP EG ALA
Sbjct: 863 WFDRVLADIGDAQSLQQNLSTFSGHIRRIRGILATAGPGSLVLLDEVGSGTDPLEGAALA 922
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
++L L + L + TTH+A+L ++D R+ N + F +LRPTYR+ WG+ G SN
Sbjct: 923 RAVLDRLAGQARLTLATTHHAELKRAAEEDGRYVNVSMAFDTASLRPTYRLCWGAAGASN 982
Query: 431 ALNIAKSIGFDRK---IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
AL+IA+++GFDR+ I A+ LV +L RQ+ +E +R L + A S
Sbjct: 983 ALDIAEALGFDRQDSHIAVVARSLVRQLDETRQE----------LEAQRALRQRLEAAQS 1032
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DA 546
E + RE+E + K L +E + E + ++ T + F L+ A
Sbjct: 1033 RLQETVSAVREMERQLK--------LSPRE---IVMERDTLAAEVQTALDAFAAGLQPQA 1081
Query: 547 SADE----INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD-K 601
S +E I +LI E +A + + D + ++ P G+ VHVK GD
Sbjct: 1082 SVEEALSRIEALIPEEVAAYRG--QGYSGGGDEEDMYDDRATLRP--GDPVHVKPYGDMG 1137
Query: 602 LATVVEVPGDDDTV 615
A VV V GD TV
Sbjct: 1138 SAKVVSVKGDYVTV 1151
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL--RN 729
P VQT +N+LD+ G E A+ +D + + SV FV HGMGTG V++ V +L R
Sbjct: 1359 PPVQTEENTLDVVGEVPELAAADVDDHIRSAPAGSVFFVRHGMGTGAVRDAVQSLLAKRQ 1418
Query: 730 HP--RVAKYEQESPMNYG-CTVAYI 751
P RV ++ +E+P + G TV ++
Sbjct: 1419 VPKGRVQEW-REAPDSRGEVTVVWL 1442
>gi|307244041|ref|ZP_07526160.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492565|gb|EFM64599.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
Length = 807
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 227/738 (30%), Positives = 361/738 (48%), Gaps = 81/738 (10%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L ++ ++EE+I I +L I D AS +L IR + +++ S L +
Sbjct: 132 PIIQSLATSLYIHKDIEEEIFNAIISELEI-ADSASPELRSIRRRILQKNQSIRSKLNGI 190
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +KA ++ ++ GI + SSSGAT F+EP VE N
Sbjct: 191 ISSTTYQKYLQDAIISMRGDRFVVPVKAEYRSMMA-GIIHDQSSSGATLFIEPMTIVEMN 249
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E IL+ L+A + + RE+ + + ++D AFA+ + M P
Sbjct: 250 NDLRQLKLQEKEEIEKILANLSAMVGQVSRELLSNQEILAKLDFAFAKGKLSIDMKATEP 309
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D + I G +HPLL KS V N
Sbjct: 310 DLNQ------DRLVRIVGGRHPLL----------------DRKSVVAN------------ 335
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DI + + ++ITGPNTGGKT ++KTLGL +LM++ GL+L A + FD
Sbjct: 336 -------DIILGGDYSTLLITGPNTGGKTVTIKTLGLFALMTQCGLHLSANYGTSMCIFD 388
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQNLSTFS H++RIVDI+E V+ +SLV+ DE+G+GTDP EG ALA +I
Sbjct: 389 QIFADIGDDQSIEQNLSTFSSHMTRIVDIVERVTDQSLVIFDELGAGTDPEEGAALAIAI 448
Query: 374 LQYLRDRVGLAVVTTHYADLS--CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
L+ +R + TTHY++L L KD ENAA EF + TL PTYR+L G G SNA
Sbjct: 449 LENIRSSGASCIATTHYSELKKYALAKKDV--ENAAVEFDMGTLSPTYRLLIGVPGKSNA 506
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G II +A+ + E + E+ Q++ + R K + + A E
Sbjct: 507 FEISRKLGLGEHIIDQAKNFLTNEDIEIE-----EVLQNVEKSRLKTQEELERAERYRQE 561
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I D+ + + + + LD+ A + Q + AK D ++++ R + E
Sbjct: 562 IEDIKLDYQAKLEKLDKSKAKVLENARSQAFSIVRQAKEDTDAMIKEIRKTDRLKDSREK 621
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSS--FTPQFGEQVHVKSLGDKLATVVEVP 609
+ ++E I + +P + V S T + G V++ +L TV+
Sbjct: 622 DRRLEEIRKKIGQSMGKFQPSVESMVVPKYASKEIKTLKPGTDVNIITLRQD-GTVISAD 680
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
+VQ G M++ + +++ I K N + +Q + +SGS
Sbjct: 681 DKKKEAIVQVGIMKMSLPYKSLKLIA----KKEKNTVTKTTRQVINSKSGSV-------- 728
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ +DLRGM +EEA+ ++ L AC + +IHG+GTG++K+ + E+L
Sbjct: 729 --------ERKVDLRGMNLEEATMAVEKYLDDACMAGHEEVTIIHGIGTGILKKGMTELL 780
Query: 728 RNHPRVAKYEQESPMNYG 745
+ +P V + P YG
Sbjct: 781 KKNPHV---KSTRPGQYG 795
>gi|78044071|ref|YP_360393.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756755|sp|Q3ABU1.1|MUTS2_CARHZ RecName: Full=MutS2 protein
gi|77996186|gb|ABB15085.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
Length = 777
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 213/714 (29%), Positives = 356/714 (49%), Gaps = 85/714 (11%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L+ IR + R + + ++K + A + +PLI+ R R + +KAS+K
Sbjct: 142 DEASPELKRIRGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKS 201
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSER 163
+P GI + S++G T F+EP AVE N + L EI E+ IL T +A +
Sbjct: 202 QVP-GIIHDRSNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEK--ILKDFTQRLACNLT 258
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EIK + + EIDL A+A A +D P +S +SF + +HPLL +
Sbjct: 259 EIKRTYELLGEIDLIVAKARLALELDAYKPRISENGVLSFKQA------RHPLLGKKA-- 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VP D+ + E +++ITGPNTGGKT
Sbjct: 311 ----------------------------------VPFDLTLGKEFDLLIITGPNTGGKTV 336
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+G+ ++M++AGL++PA + F + DIGD QS+ Q+LSTFS H+ + IL
Sbjct: 337 TLKTIGILTIMARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFIL 396
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E LVL+DE+G+GTDP EG ALA +IL+ LR + V TTH ++L+ + R
Sbjct: 397 ENAREGDLVLLDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYAIETERV 456
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF E+L+PTYR+ G G SNAL IA+ +G +II++A+ + + ++ +
Sbjct: 457 ENASVEFDPESLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAKSFL-----KEEELK 511
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+L + +E+R+LE A+L + + ++ DE ++L++ + K ++ QQ
Sbjct: 512 LDKLIFDVEQEKRQLEKAKEEVANLLISLKEKEAKLNDELENLEKTKEEIIRKYREKYQQ 571
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
+L + + V+++ + +++ + L++E+ +F++
Sbjct: 572 KLLEIERKGKLVIEEIKEKIKTYEEKNLAKLLEEARQKTKEF------SQNFALPFEPIK 625
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 643
+ P+ GE V + +G K A V+ V ++ +VQ G M++ V + IRP
Sbjct: 626 PYRPKVGETVELVEVGQK-AEVLAV--GENYAIVQAGIMKLNVSFDQIRPA--------- 673
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 701
+KQ+++ + G + E + + Q LD+RGM EA ++ L A
Sbjct: 674 ------QKQEKENEKGQVKKAGLELT---KKQNFNLELDIRGMNTLEAEPVVEKYLDNAY 724
Query: 702 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 752
+ +IHG GTG +K+ + + LR P V K+ +P N G T Y+K
Sbjct: 725 LAGVEKVRIIHGKGTGALKKFLWDYLREVPFVKKF-NFAPQNQGGDGATEVYLK 777
>gi|354580077|ref|ZP_08998982.1| MutS2 family protein [Paenibacillus lactis 154]
gi|353202508|gb|EHB67957.1| MutS2 family protein [Paenibacillus lactis 154]
Length = 789
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 227/760 (29%), Positives = 369/760 (48%), Gaps = 96/760 (12%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H P+ L + ++E LE+ I CID + LD AS +L IR E + R
Sbjct: 109 IHEDEPIDILFHLSDLISEQKPLEDAIRACIDDSAEV-LDTASAELAQIRRELRNGEVRI 167
Query: 63 MENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E L+S+++ + A++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA++ + + +D V ++D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRIREEREIEVILQKLTAQVGEQADVLAIDVDLVGQLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A M P ++ + ++ +HPL+ P+
Sbjct: 282 ARLAHVMKASLPRMNDRGYIKLRKG------RHPLI----------------PM------ 313
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
D VP+D+++ +++TGPNTGGKT ++KT+GL +LM+ +GL++
Sbjct: 314 -------------DQVVPLDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFI 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GT
Sbjct: 361 PAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILTQMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA +IL+++ + TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAIAILEHIHSMGCRMIATTHYSELKAYAYERKGIINASMEFDINTLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G I++ A+ V + + R + SL E R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVEHMIASLEENRHTAEVE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A + E+ +L +E + L+ + L K + +Q ++ A+ + + ++ D
Sbjct: 536 REKAEQVRKEMEELRARHREELQRLEDQRDKLVDKARVEAKQIVDKARSEAEQIISDLRK 595
Query: 542 --QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
Q AS E + A + RP + + + G++V V SL
Sbjct: 596 LAQEEGASVKEHKLIAARKRLEEAEPEQGKRP----GAQRQSKQQRSIEAGDEVRVYSLN 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K VVE+ G + + VQ G M+++V +++ + +NPA ++ Q +Q
Sbjct: 652 QK-GHVVELAGSKEAI-VQLGIMKMKVGLDDLELL--------SNPAANAKQAQ--KQHA 699
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTG 717
+ +A+ +N LDLRG +EEA ++D I A + +++IHG GTG
Sbjct: 700 TVLKRTRDANI-------RNELDLRGANLEEALIEVDRFIDEAFLGNLGQIYIIHGKGTG 752
Query: 718 VVKERVLEILRNHPRVAKYEQESPMNY-----GCTVAYIK 752
+++ + E LR H V Y NY G T+A +K
Sbjct: 753 ILRTGIQEYLRKHKHVKSYRLG---NYGEGGTGVTIAELK 789
>gi|408356333|ref|YP_006844864.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
gi|407727104|dbj|BAM47102.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
Length = 783
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 230/745 (30%), Positives = 364/745 (48%), Gaps = 98/745 (13%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSL 69
P++ EL+ L LE +I CID + LD AS L IR + + N + LDSL
Sbjct: 117 PIIRELVGQIELLNHLEREIKSCIDDNGHV-LDGASSKLRQIRMKIRTNESRIRDRLDSL 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
K + + A ++T R R + +K ++ GI + SSSG T F+EP+
Sbjct: 176 TKSKSKMLSDA------IVTIRNDRYVLPVKQEYRGAF-GGIVHDQSSSGQTLFIEPQVV 228
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E AE IL L+ EI + + + + ++D FARA + M
Sbjct: 229 VEINNQLSEARAQEKAEIERILRQLSQEIGTHHPYLTHNVKILTQLDFIFARAKLGRSMK 288
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ Q I+I+ +HPLL N + V +
Sbjct: 289 AAMPKMNDQG------IIDIKQARHPLL-----------------------NEDEVVAN- 318
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
DI + + +VITGPNTGGKT ++K +GLA+LM+++GL +PA + RL
Sbjct: 319 -----------DILLGEDYHAIVITGPNTGGKTVTLKLVGLATLMAQSGLQVPALDGCRL 367
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
FD + ADIGD QS+EQ+LSTFS H+++IV IL+ V+ +SLVL DE+G+GTDP EG AL
Sbjct: 368 AVFDEVFADIGDEQSIEQSLSTFSSHMTQIVKILKQVNHKSLVLFDELGAGTDPQEGAAL 427
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL Y+ ++ + TTHY +L NA+ EF +++L+PTYR+L G G S
Sbjct: 428 AMAILDYVVNKKARVIATTHYPELKAYGYNRDGVINASVEFDVKSLQPTYRLLIGVPGRS 487
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I++ +G D +II+ ++L+ + +H + +SL RR+ E A
Sbjct: 488 NAFEISRRLGLDDQIIEAGKQLI-GTDTKSVEH----MIESLDTARRQAEQDYDDAERTL 542
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
E L ++ E + D+ L K + Q+ + A+ + +V+ AS
Sbjct: 543 QEAEALRDQLRKELEKFDQERERLYQKAEETAQKAIEKARQEATEIVESIRQMQHGASLK 602
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
E + AA + ++ ++ + +F + G++V+V +L ++ T++ +
Sbjct: 603 EHEWIEARKRLDQAAPNLTDKRQENKALHTSAKQTF--EVGDEVNVLTL-NQNGTIIAIN 659
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN--AANPAPRLRKQQEDRQSGSAGSSNEE 667
DDD + VQ G M+++VKK ++R I KR+N A P ++ GS
Sbjct: 660 ADDD-IQVQIGVMKLKVKKRDLRLI---KRENPIVAKPLATVK-----------GSHYH- 703
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
K LDLRG R E+A +L D LA ++ + +IHG GTG +++
Sbjct: 704 ---------VKPELDLRGERYEDALAELENYIDDAILAGYQK---VTIIHGKGTGALRKG 751
Query: 723 VLEILRNHPRVAKYEQESPMNYGCT 747
V ++HP + K + MN G +
Sbjct: 752 VQSFAQSHPNI-KSSRVGGMNEGGS 775
>gi|418637528|ref|ZP_13199847.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
gi|374838774|gb|EHS02309.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
Length = 783
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 224/756 (29%), Positives = 358/756 (47%), Gaps = 106/756 (14%)
Query: 13 YSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
Y PLL + + LT+L ++I D L D AS +L+ IR++ +R +NLD
Sbjct: 118 YYPLLHDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLD 175
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ GI + S+SG T ++EP
Sbjct: 176 RIVKNQSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPS 230
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL++LT +A+ + + + +D A+A +A
Sbjct: 231 SIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASA 290
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + ++ HPLL +N+ DVE
Sbjct: 291 IKGTKPTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------- 331
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 332 ----------------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGS 369
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F + DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG
Sbjct: 370 QLSVFHDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGA 429
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y R L + TTHY +L NA+ EF ++TL PTY++L G G
Sbjct: 430 ALAMSILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 489
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA +I+K +G + II +A+ ++ E +LM E LE A+ +
Sbjct: 490 RSNAFDISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDT 537
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
E+ L +E + DL+++ +A E Q ++ + A ++ ++ + L++
Sbjct: 538 QRIELDHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELR 597
Query: 548 A--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 600
D+ + +KE E I + + D+ + ++ G++V V S G
Sbjct: 598 TLRDQKGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQ 653
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K V+E+ G+D+ V VQ G +++++ ++ I +K P +++Q
Sbjct: 654 K-GEVLELVGNDEAV-VQMGIIKMKLPIEDLEKI----KKKQEKPTKMIKRQHR------ 701
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
QT K LDLRG R EEA +LD L A + +++IHG GTG
Sbjct: 702 --------------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGA 747
Query: 719 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V + P +G TVA +K
Sbjct: 748 LQKGVQQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|57866654|ref|YP_188310.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis RP62A]
gi|242242444|ref|ZP_04796889.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|418612985|ref|ZP_13176006.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|418626824|ref|ZP_13189420.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|420175070|ref|ZP_14681515.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|420234319|ref|ZP_14738884.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
gi|81674957|sp|Q5HQ30.1|MUTS2_STAEQ RecName: Full=MutS2 protein
gi|57637312|gb|AAW54100.1| MutS2 family protein [Staphylococcus epidermidis RP62A]
gi|242234094|gb|EES36406.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|374817295|gb|EHR81480.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|374831368|gb|EHR95110.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|394244356|gb|EJD89701.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|394304373|gb|EJE47778.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
Length = 782
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 231/762 (30%), Positives = 368/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|223043809|ref|ZP_03613852.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|417907533|ref|ZP_12551304.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
gi|222442906|gb|EEE49008.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|341595562|gb|EGS38205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
Length = 782
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 225/754 (29%), Positives = 361/754 (47%), Gaps = 101/754 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L E + LT+L ++I C + D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILDEKMSQLPVLTDLFQEIKD--KCDTYDLYDHASYALQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQSNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL+ LT ++A I + +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGQVAVEADSILIAESVMGQIDFLIAKARYARS 289
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + V ++ HPLL SN+ DVE
Sbjct: 290 IKGTKPTFKKERTVYLPNAF------HPLL------DKETVVSNTIEFIDDVE------- 330
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 ----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGS 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG
Sbjct: 369 QLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGA 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G
Sbjct: 429 ALAMSILDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFNVDTLSPTYKLLMGVPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA +I+K +G II +A+ ++ + + + +SL ++++ Q
Sbjct: 489 RSNAFDISKKLGLGLNIINKAKTMI-----GTDEQEINSMIESLERNSKRVDEQRIELDR 543
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E + + + + + L + ++ Q + A + DT++++ + LRD
Sbjct: 544 LVREAQETHDALAKQYQQYQNYEQSLMNEAKEKANQRVKSATKEADTILKELRD-LRDNK 602
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKL 602
E +KE E I + + DD + S ++ G++V V S G K
Sbjct: 603 GAE----VKEHE----LIDKKKQLDDQYEAKSIKQSVQKKKYDKINAGDEVKVLSYGQK- 653
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
V+E+ G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 654 GEVLELVGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPAKMVTRQNR------ 700
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 720
QT K LDLRG R EEA +LD L A + +++IHG GTG ++
Sbjct: 701 ------------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGALQ 748
Query: 721 ERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+ V + L+ H V+K+ P +G TVA +K
Sbjct: 749 KGVQQHLKKHKSVSKFRGGMPSEGGFGVTVAELK 782
>gi|182626137|ref|ZP_02953897.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|422874800|ref|ZP_16921285.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
gi|177908574|gb|EDT71099.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|380304441|gb|EIA16730.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
Length = 786
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 226/719 (31%), Positives = 353/719 (49%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + +DG PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLDGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|256003347|ref|ZP_05428338.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|385778551|ref|YP_005687716.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|419723621|ref|ZP_14250736.1| MutS2 protein [Clostridium thermocellum AD2]
gi|419724554|ref|ZP_14251616.1| MutS2 protein [Clostridium thermocellum YS]
gi|255992637|gb|EEU02728.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|316940231|gb|ADU74265.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|380772101|gb|EIC05959.1| MutS2 protein [Clostridium thermocellum YS]
gi|380780303|gb|EIC09986.1| MutS2 protein [Clostridium thermocellum AD2]
Length = 793
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 214/705 (30%), Positives = 347/705 (49%), Gaps = 87/705 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR + + E++ L + I +P++T R R + +K +
Sbjct: 146 IADNASPTLANIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ +P G+ + S+SGAT F+EP VE NN L E AE IL LT EI
Sbjct: 206 RTEIP-GLIHDSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVD 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+K + + +D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 265 SLKSNVSILGRLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ TV VPID + + +V+TGPNTGGKT
Sbjct: 313 ------------------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTV 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL
Sbjct: 344 TLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V +SLVL DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L
Sbjct: 404 KDVDEDSLVLFDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFV 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF++ETLRPTYR+L G G SNA I+K +G II++A++ + + +
Sbjct: 464 ENACCEFNVETLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQ-----DDIK 518
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
++ S+ + + E++ A S E L +E+E++ + L L + + ++
Sbjct: 519 FEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARK 578
Query: 524 ELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
L A+ + + ++ Q+ N R A+E+ +K +I +E
Sbjct: 579 ILLEARKEAEEIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LP 631
Query: 577 VSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ N P+ G+ V + +L D+ T++ P D V+VQ G M++ V +N++
Sbjct: 632 LAPKNALVKPPENLKPGDSVLIVNL-DQKGTIITPPDKDGEVVVQAGIMKINVHISNLKL 690
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ + ++ +N G G S + ++ +D+RG +EEA
Sbjct: 691 V-DEQKIVLSNSG-----------IGKIGMS--------KAKSISTEIDVRGYNLEEAIE 730
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + + +IHG GTGV++ + + L++ RV +
Sbjct: 731 SVDKYLDDAYLSGLTEVSIIHGKGTGVLRSGIQKFLKSDSRVKSF 775
>gi|320529025|ref|ZP_08030117.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
gi|320138655|gb|EFW30545.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
Length = 785
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 222/722 (30%), Positives = 347/722 (48%), Gaps = 95/722 (13%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIK 100
D AS +L + E + R E L ++L A Q FQ + ++T R R + +K
Sbjct: 144 DDASPELRRVTREMLSAQNRVKERLSAILHDAAYQKCFQ-----EAIVTVRAERYVIPVK 198
Query: 101 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 160
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA+
Sbjct: 199 QEYRAQFP-GVIHDRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIAR 257
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
+ + + +IDL FARAG ++ M+ P + +V + +HPLL
Sbjct: 258 AADILSENCTILADIDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL--- 308
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P D VPIDI++ + V++ITGPNTGG
Sbjct: 309 -------------P-------------------KDHVVPIDIELGRDFSVLLITGPNTGG 336
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT SMKTLG+ +LM+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 337 KTVSMKTLGILALMAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIV 396
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
IL+ + LVL+DE+G+GTDP EG ALA SI+++L R + TTHYA L
Sbjct: 397 RILQKAKSDDLVLLDEVGAGTDPGEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGR 456
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
NA+ EF TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ +
Sbjct: 457 QGVMNASVEFDTGTLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------E 510
Query: 461 QHRKSELYQSLMEERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
H + E + +E+ +++ +++ RT A + + + R D+ R H +
Sbjct: 511 DHVRFETVVNELEQEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRELLHKARE 570
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
E + +E A+ + ++ + Q D E I+E+ + EA+ P S
Sbjct: 571 EANGIVRE---ARRSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPS 624
Query: 577 VSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + G+ VH+ L + TV + G + T VQ G +R VK + +
Sbjct: 625 AAKVGQKIHAGEIEPGDIVHITRLAQE-GTVFAIQGKELT--VQIGALRTVVKTDECTFV 681
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
K+K+ + G G +++A+ RV T +D+RGM V EA
Sbjct: 682 SRKKKKHRTE------------KVGFTGGISQKAA---RVHT---QIDVRGMTVSEAELT 723
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAY 750
L I A + S + +IHG GTG ++ + + L+ HP V + S G +VA
Sbjct: 724 LGKFIDDAVFAGLSKILIIHGKGTGALRLGIQDYLKRHPSVLSVAFADISEGGSGASVAE 783
Query: 751 IK 752
+K
Sbjct: 784 LK 785
>gi|110803296|ref|YP_699161.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens SM101]
gi|122956595|sp|Q0SRU6.1|MUTS2_CLOPS RecName: Full=MutS2 protein
gi|110683797|gb|ABG87167.1| MutS2 family protein [Clostridium perfringens SM101]
Length = 786
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 227/719 (31%), Positives = 353/719 (49%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G II+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + DT++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADTILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|381183546|ref|ZP_09892273.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
gi|380316562|gb|EIA19954.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
Length = 784
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 233/755 (30%), Positives = 364/755 (48%), Gaps = 107/755 (14%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLK 71
L EL K L +LEE+I +D + +LD ASE L +R R E L+SLL+
Sbjct: 119 LFELTKEILVLKDLEEEINLTVD-EAGYMLDTASETLRSVRQTLARTEGRVREKLESLLR 177
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
A A + +IT R R + +K ++ G+ + S+SG T F+EP+ V+
Sbjct: 178 DRNA----ATMLSDAIITIRNDRYVIPVKQEYRSHY-GGVIHDQSASGQTLFVEPQSVVD 232
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWM 188
NN L E E IL+ ++A++A+ +EI Y++ R D A+A F +
Sbjct: 233 LNNERRALQAKENQEIERILAEMSAKLAEFIQEIHHNTYILGR---FDFILAKARFGKSQ 289
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ P H++ + + +HPLL D EN
Sbjct: 290 KAITP------HLNNEGVTKLYAARHPLL--------------------DPENV------ 317
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
V DI + +VITGPNTGGKT ++KTLGL ++M++AGL +PA+
Sbjct: 318 ---------VANDILLGDGYSTIVITGPNTGGKTITLKTLGLLTMMTQAGLQIPAQEESL 368
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+ ++ I ADIGD QS+EQ+LSTFS H++ IV ILE +++ SLVL DE+G+GTDP EG A
Sbjct: 369 VAIYEDIFADIGDEQSIEQSLSTFSSHMTNIVSILEKLNQNSLVLFDELGAGTDPQEGAA 428
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA SIL + R V TTHY +L NA+ EF++ETL PTY++L G G
Sbjct: 429 LAISILDEVAKRGASVVATTHYPELKAYGYNRVFATNASVEFNVETLSPTYKLLIGIPGR 488
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I++ +G + +I A+ LV + + +E+ SL E+R E++ + A+ L
Sbjct: 489 SNAFEISRRLGLNEGVIDEARALV-----DTESADLNEMISSLEEKRNLAEAEYKEASEL 543
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDAS 547
+ L R+++ E + + L + ++ + + A+ + DT++++ E QLR AS
Sbjct: 544 AKDADKLLRDLQKEIRTYYEQKDKLLERANEKASEVVTAAEEEADTIIRELRELQLRGAS 603
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
+ + LI +++S +A + F Q G+ V V SLG K + +
Sbjct: 604 GVKEHELI-DAKSRLAGAKPKTIQKKVVHPVKKVAHKF--QEGDGVRVLSLGQKGVLLDK 660
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK------NAANPAPRLRKQQEDRQSGSA 661
V G + VQ G +++++K+ ++ I K K N N P
Sbjct: 661 VSGSEWN--VQIGIIKMKIKETDLEYIQPEKPKKQRVITNVRNTEP-------------- 704
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 719
+ LDLRGMR E+A ++D I A + +IHG GTG +
Sbjct: 705 ---------------VRAELDLRGMRYEDALFEVDKYIDEALLAGYPRVAIIHGKGTGAL 749
Query: 720 KERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+ V E L+NH V ++ + G T+A +K
Sbjct: 750 RTGVTEFLKNHRMVKNIRFGDAAEGGNGITIAELK 784
>gi|78778605|ref|YP_396717.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
gi|78712104|gb|ABB49281.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
Length = 803
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 231/730 (31%), Positives = 368/730 (50%), Gaps = 105/730 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL-------ITKRRSRMC 96
I D AS L ++R E L KK+ +I I K L I R R
Sbjct: 158 ISDDASSKLSILRKEL---------LSKKLERKILVDKFIQKNLAYLQDTIIGDRYGRPV 208
Query: 97 VGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +K ++ K+ GI + SSSG T + EP V N L AEE +L
Sbjct: 209 LAVKVNYIDKF---KGIIHDSSSSGNTVYFEPDSVVTKGNKIASLEARIAAEEFKLLQKW 265
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
+ I+ + + + +L ++ A R+ +++W+ G PI +S + G H
Sbjct: 266 SQVISDNSENLIAMASILLRLENALTRSRYSKWIGGKTPIFEENPIIS------LIGFSH 319
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PLL+ EN + KG S PV +D ++ +VV IT
Sbjct: 320 PLLIW--------------------ENKK-------KG-SPPPVAVDFQINRNIKVVAIT 351
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+NLSTFSG
Sbjct: 352 GPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSG 411
Query: 335 HISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 391
HISRI +ILE + S+VL+DEIGSGTDP EG ALA ++L+ ++ + + TTHY
Sbjct: 412 HISRIKEILESLDNRRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDITLATTHYG 471
Query: 392 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 451
D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG + I+ A
Sbjct: 472 DIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLNESILNEA--- 528
Query: 452 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
L+P+ + S + + L EER K ++ A AA L A L+ E++ + A
Sbjct: 529 ANYLKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYEYQKINAE 587
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAAIV 566
++ E ++ +++ AK + V D +LRD + + I +KE E+
Sbjct: 588 KIQEIERYKLSKKIISAKKE----VIDLIRKLRDQNVNGEDTRIIGKRLKEIET------ 637
Query: 567 EAHRPDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
+ + + + S S+ P+ G+ V +KSL + +V++ V+ G R
Sbjct: 638 ------EHLTQKKVDKSISWNPKVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKCGSFRSI 690
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
+ N+ I K P ++ + + + SS E+ S+ +V+TSKN++D+RG
Sbjct: 691 LSVNDFEGINGEK--------PNFKRSKIEIK-----SSREDFSFS-KVRTSKNTIDVRG 736
Query: 686 MRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY- 744
+RV EA ++ + + L+++HG+GTG +K+ + + L V K E ++ +N
Sbjct: 737 LRVHEAEIIIEEKIRKFHGP--LWIVHGIGTGKLKQGLRKWLSGLNYVDKIE-DAALNEG 793
Query: 745 --GCTVAYIK 752
GC++A+IK
Sbjct: 794 GPGCSIAWIK 803
>gi|452995728|emb|CCQ92597.1| MutS2 protein [Clostridium ultunense Esp]
Length = 792
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 221/698 (31%), Positives = 343/698 (49%), Gaps = 75/698 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR + E++ + L + + + ++T R R V IK +
Sbjct: 147 ISDNASPTLRNIRRQIINKNESIRNRLNSIISSPKYKKFLQDSIVTMREGRYVVPIKQEN 206
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K P G+ + SSSGAT F+EP VE NN L E E IL L+A +A+ +
Sbjct: 207 KAYFP-GLVHDQSSSGATLFVEPMAVVELNNELRELEIKEREEIERILKELSALVAEEAK 265
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I+ + + +D FA+ A MDG P+L+ + I+I+ +HPLL
Sbjct: 266 NIRNNQNILQRLDFIFAKGKLALEMDGTKPLLNKSGY------IDIKQARHPLL------ 313
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
E E+ VPIDI + +VITGPNTGGKT
Sbjct: 314 ----------------EPKEV-------------VPIDIYLGKGFNTLVITGPNTGGKTV 344
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+++PA + ++ FD I ADIGD QS+EQ+LSTFS H++ IVDIL
Sbjct: 345 TLKTVGLLTLMAQSGIHIPADFNSQIGVFDQIFADIGDEQSIEQSLSTFSSHMTNIVDIL 404
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V + SL+L DE+G+GTDP+EG ALA SIL +L + TTHY+ L R
Sbjct: 405 DKVEQNSLILFDELGAGTDPTEGAALAMSILDHLLKLNIRTIATTHYSQLKIYALTTDRV 464
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF +ETL PTYR+L G G SNA I+K +G II A+ LV + E +
Sbjct: 465 RNASVEFDVETLSPTYRLLIGVPGKSNAFEISKRLGLQGYIIDYAKTLVSKENVEFE--- 521
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
++ Q++ ++R+ +E A L +++ L E+ E + + + ++ +
Sbjct: 522 --DVLQAIDKDRKIIEENRFEAERLKSDVEKLKEELTKEKEKTKAEREKIITRAKEEARS 579
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI---VEAHRPDDDFSVSET 580
L AK + D +V + + + D N I+E++ + + VE+ D +V
Sbjct: 580 ILRAAKEESDHIVTELRHISTEIEKDR-NKKIQEAQEKLKSSLDQVESSLSKDVLNVKSK 638
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
+ GE V V SL +++ V+E+P ++ V VQ G M+V V + +R + +
Sbjct: 639 KIPK-NLKIGEMVEVLSL-NQIGNVLELPDENGNVQVQVGIMKVNVHISTLRRAEEVESE 696
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 698
++ K + SSN KN +DLRG ++EA LD I
Sbjct: 697 KTYTSTKKIIKSK---------SSN-----------IKNEIDLRGSTLDEALLDLDKYID 736
Query: 699 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A ++IHG GTGV++E + ++ H V +
Sbjct: 737 DAYIAGLKEAYIIHGKGTGVLREGIKSYVKGHKNVKSF 774
>gi|160893752|ref|ZP_02074536.1| hypothetical protein CLOL250_01306 [Clostridium sp. L2-50]
gi|156864737|gb|EDO58168.1| MutS2 family protein [Clostridium sp. L2-50]
Length = 791
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 218/728 (29%), Positives = 346/728 (47%), Gaps = 77/728 (10%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS +EL+ L L ++I CI + I D AS L+ +R +K E L + L K
Sbjct: 120 YSRFMELVP----LEHLSQEIHRCILSESEIA-DDASSGLKAVRRNKKLTNEKLHNQLNK 174
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + LIT R R C+ +K +K P G+ + SSSG T F+EP V
Sbjct: 175 LVTDQSKQTMFQDNLITMRNGRYCIPVKQEYKNSFP-GMIHDQSSSGNTVFIEPLAVVNL 233
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L N E+AE IL L+A A IK+ + + ++D FARA FA+ G
Sbjct: 234 NNQLKELDNQELAEIEKILENLSARAASEYENIKFDFETLTDLDFIFARANFARSYKGTE 293
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
PI ++ D ++I+ +HPLL + TV
Sbjct: 294 PIFNT------DGIVDIKQGRHPLL------------------------DKHTV------ 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP+DI++ + +++ITGPNTGGKT S+KTLGL +LM ++GL++PA + RL F
Sbjct: 318 -----VPVDIRLGEDYNLLIITGPNTGGKTVSLKTLGLFTLMGQSGLHIPALDGSRLNVF 372
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
D + ADIGD QS+EQ+LSTFS H+S +V I+ V+ +L L DE+G GTDP EG ALA +
Sbjct: 373 DDVFADIGDEQSIEQSLSTFSSHMSNVVYIMNHVTPNTLCLFDELGGGTDPVEGAALAIA 432
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL L D+ + TTHY++L +NA+ EF + TL PTYR++ G G SNA
Sbjct: 433 ILSSLNDQDIRCMATTHYSELKLFAMSTPGVQNASCEFDVATLMPTYRLIIGIPGKSNAF 492
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 492
I+K +G II+RA+ ++ + + + L L R+++E A E
Sbjct: 493 AISKKLGLSDDIIERAKTNIDSNKVDFET-----LLSDLENSRKEIERDKAEIARFKEEA 547
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
L + + +L + A + A ++ L AK D+ ++ + + + +
Sbjct: 548 RQLQERAKAKDDELSAKKAQILADAREEAADILEEAKEMADSAIKKYNKWTTNPHKADAS 607
Query: 553 SLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
++ E + + + + P+ S++ +T+ + G+ VHV S+ D TV
Sbjct: 608 TMENERKKLRTKMDDYRKMTPEKRKSMTSHHTAK-DFKAGDTVHVISM-DTTGTVTAPAD 665
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
+ VQ G + + PA L + +Q+ + S N +
Sbjct: 666 SKGNIKVQMGILSSLL------------------PASDLVIIETPKQNNAQVSINNKRGM 707
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
G + + +++ GM V EA+ +D L A + +IHG GTG +++ + + LR
Sbjct: 708 GKALNI-QPEINVLGMTVAEATSLVDRYLDDAMMAHLHKVRIIHGKGTGALRKGIHDYLR 766
Query: 729 NHPRVAKY 736
V +
Sbjct: 767 KQSYVKSF 774
>gi|222529627|ref|YP_002573509.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
gi|254766186|sp|B9MK78.1|MUTS2_ANATD RecName: Full=MutS2 protein
gi|222456474|gb|ACM60736.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 787
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 215/714 (30%), Positives = 358/714 (50%), Gaps = 108/714 (15%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR ++ R +EN L+S+++ Q F + +P+IT R ++ +
Sbjct: 142 ILDTASSKLKEIR-DKIRKLENKIRDELNSMIRDPKIQRF----LQEPIITIRGEKLLLP 196
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+KA + + GI + S++GAT F+EP VE +N L N E E IL +++ I
Sbjct: 197 VKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEISNQIKILKNQEKEEIERILQEISSLI 255
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A I+ ++E+D+ F +A +A+ M+ PI+++ IN++ +HPL+
Sbjct: 256 ASYCEVIETSFYALVELDIVFTKAIWAKEMNASKPIINASG------IINLKKARHPLIQ 309
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
D VPIDI + + V++ITGPNT
Sbjct: 310 -----------------------------------KDKVVPIDIHLGKDFDVLIITGPNT 334
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT+GL L+ ++G+++PA L F I ADIGD QS+ Q+LSTFS H+
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I++I + ++LVL+DEIG+GTDP EG ALA +IL+YL ++ + TTHY +L
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGELKIFAQ 454
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----QKLV- 452
++ RFENA+ EF ++TL+PTYR+L G G SNAL I+ ++G D+ I++ A QK +
Sbjct: 455 QEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTID 514
Query: 453 -ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
+R+ E +Q RK + ++ K E+QA AA E+E K +
Sbjct: 515 LDRIINEMEQKRKEAEENLELAQKLKHEAQALKAA------------YEEEKKRFETERE 562
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDF----ENQLRDASADEINSLIKESESAIAAIVE 567
++ K + ++ + ++ +I+ + +D EN E+ +E E I +I +
Sbjct: 563 RIRKKAINEAKEIVESSQYEIENLFKDLRKLAENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + + S+T + + G++V+V+S D V +P + VQ G M++ V
Sbjct: 623 QVKQEAE---SKTKKTIQNLRLGQKVYVRSF-DAEGFVESLPDSKGNLTVQIGIMKINVN 678
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLR 684
++I + + +D + S N + KN S+D+R
Sbjct: 679 LSDIEEV-----------------EGQDSKIYQIASRN-------VIIKEKNIDMSIDVR 714
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G ++A ++D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 715 GKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 768
>gi|289551051|ref|YP_003471955.1| recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|385784672|ref|YP_005760845.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|418414347|ref|ZP_12987562.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180583|gb|ADC87828.1| Recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|339894928|emb|CCB54231.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|410876954|gb|EKS24851.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 783
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 225/756 (29%), Positives = 359/756 (47%), Gaps = 106/756 (14%)
Query: 13 YSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
Y PLL + + LT+L ++I D L D AS +L+ IR++ +R +NLD
Sbjct: 118 YYPLLHDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLD 175
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ GI + S+SG T ++EP
Sbjct: 176 RIVKNQSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPS 230
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL++LT +A+ + + + +D A+A +A
Sbjct: 231 SIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASA 290
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + ++ HPLL +N+ DVE
Sbjct: 291 IKGTKPTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------- 331
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 332 ----------------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGS 369
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F + DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG
Sbjct: 370 QLSVFHDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGA 429
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y R L + TTHY +L NA+ EF ++TL PTY++L G G
Sbjct: 430 ALAMSILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 489
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA +I+K +G + II +A+ ++ E +LM E LE A+ +
Sbjct: 490 RSNAFDISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDT 537
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
E+ L +E + DL+++ +A E Q ++ + A ++ ++ + L++
Sbjct: 538 QRIELDHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELR 597
Query: 548 A--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 600
D+ + +KE E I + + D+ + ++ G++V V S G
Sbjct: 598 TLRDQKGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQ 653
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K V+E+ G+D+ V VQ G +++++ I + +K+K P +++Q
Sbjct: 654 K-GEVLELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQHR------ 701
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
QT K LDLRG R EEA +LD L A + +++IHG GTG
Sbjct: 702 --------------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGA 747
Query: 719 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V + P +G TVA +K
Sbjct: 748 LQKGVQQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|418325075|ref|ZP_12936285.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|420185530|ref|ZP_14691622.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
gi|365228981|gb|EHM70153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|394254516|gb|EJD99485.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
Length = 782
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 232/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V +Y P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQYRGGMPSEGGFGVTVAELK 782
>gi|427405780|ref|ZP_18895985.1| MutS2 family protein [Selenomonas sp. F0473]
gi|425708621|gb|EKU71660.1| MutS2 family protein [Selenomonas sp. F0473]
Length = 785
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 230/718 (32%), Positives = 348/718 (48%), Gaps = 121/718 (16%)
Query: 47 RASEDLELIRAERK------RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGI 99
R LEL R R+ R E L ++L A Q FQ +P+IT R R + +
Sbjct: 143 RDDASLELRRVTRELVSAQGRVKEKLSAILHDAAYQKCFQ-----EPIITVRDERYVIPV 197
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ P G+ + S+SGAT F+EP VE NN ++ + E IL LT EIA
Sbjct: 198 KQEYRNQFP-GVIHDQSASGATLFVEPLATVELNNTVRQMEIAREHEIQRILQQLTQEIA 256
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
S + + +D FARAG A MD P+ + +V + +HPLL
Sbjct: 257 SSSDILSENCTILAGLDFIFARAGLAHNMDAYAPVFNRSRYVRLRRA------RHPLLPK 310
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ VPIDI++ + V++ITGPNTG
Sbjct: 311 EQV-----------------------------------VPIDIELGRDFSVLLITGPNTG 335
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT SMKTLG+ +LM+++G +LP LP + I ADIGD QS+EQ+LSTFS H I
Sbjct: 336 GKTVSMKTLGILALMAQSGCFLPTAPGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNI 395
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V IL+ E LVL+DE+G+GTDP EG ALA SI++YL + V TTHYA L
Sbjct: 396 VRILQKAGGEDLVLLDEVGAGTDPDEGAALARSIIEYLLHKHISVVATTHYAALKTYAYG 455
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK--------- 450
NA+ EF + TLRPTYR+L G+ G SNA +I++ +G ++I+ RAQ+
Sbjct: 456 RKGVMNASVEFDIATLRPTYRLLIGTPGASNAFSISRRLGLSQEIVARAQQYINEDHVRF 515
Query: 451 --LVERLRPERQQHRKS-------ELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+V L E++++ K E S++EER +E +HA DL + +
Sbjct: 516 EIIVNELEQEKREYEKKHNELRVREQKFSVLEERLHIERD----KFIHAH-RDLLHKARE 570
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKV-QIDTVVQDFENQLRDASADEINSLIKESES 560
EA ++ R A + + ++++ + V + V+Q QL+DA I +S +
Sbjct: 571 EANNIVREARRNAEETIKTLKEQFDDHGVKERRKVIQSVREQLKDA-------YIPQSMT 623
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
A ++ R +D Q G+ V++K+L + TV+ V ++ + VQ G
Sbjct: 624 AGISVGTKIRAED-------------IQRGDIVYIKNLARE-GTVLSV--HENELTVQVG 667
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+R VK N I SK+K +K++ ++ + ++ S + A P++
Sbjct: 668 GLRTIVKINACTFI--SKKK---------QKRRVEKVNIASSISQKSAHIRPQI------ 710
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
D+RGM V EA L I A + S + +IHG GTG ++ + + L+ H V +
Sbjct: 711 -DVRGMTVSEAELSLSKFIDDAVFTGLSNILIIHGKGTGALRLGIRDYLKRHKSVLSF 767
>gi|420189663|ref|ZP_14695631.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|420204084|ref|ZP_14709644.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
gi|394260998|gb|EJE05800.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|394274098|gb|EJE18523.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
Length = 782
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 231/762 (30%), Positives = 368/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|227524346|ref|ZP_03954395.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
gi|227088577|gb|EEI23889.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
Length = 788
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 225/725 (31%), Positives = 347/725 (47%), Gaps = 99/725 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
ILD AS +L IR R ++ S + K + G K L IT R R + I
Sbjct: 147 ILDTASSELRTIRRTINRTQNDIRSRIGK-----YLKGSDSKYLTESIITMREDRFVLPI 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
+A +K GI + S+SG T ++EP VE NN R +E AEE IL+ LT I
Sbjct: 202 RADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEERRILAELTDLIR 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
E+ M+ V ++D A+A FA + V P +S D+ +N+ +HPL+
Sbjct: 261 PYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EISRDNVVNLRQARHPLI-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D V DI++ E R ++ITGPNTG
Sbjct: 313 ---------------------------------ARDKVVANDIQIGDEYRTIIITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I
Sbjct: 340 GKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 400 ISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGCELIATTHYPELKAYAYN 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF +ETLRPTYR L G G SNALNIA +G + II++A+ + +
Sbjct: 460 RSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSKGIIEKARAFTDSENQDI 519
Query: 460 QQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
Q+ +E +L+ Q + LH ++ + + + +++ KD HL +
Sbjct: 520 NNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQNQ-KD------HLLEQA 572
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAI----VEAHRP 571
+Q Q + AK+ D ++ D + + S IKE+E A A+ V +
Sbjct: 573 REQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENELIDAKGALNRLEVTPNLK 628
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+ E F P G++V VKS G + + + + VQ G +++++ +N++
Sbjct: 629 KNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK--NGAWEVQLGILKMQIDENDL 684
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
K A + + Q + ++ S+G S P +LDLRG R EEA
Sbjct: 685 -------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-------TLDLRGHRYEEA 723
Query: 692 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCT 747
++LD I A + +IHG GTG +++ V E LR++ R+ + +P G T
Sbjct: 724 MYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNARIKSFGYSAPNAGGDGST 783
Query: 748 VAYIK 752
V K
Sbjct: 784 VVKFK 788
>gi|417645954|ref|ZP_12295839.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
gi|329729966|gb|EGG66357.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
Length = 782
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 230/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA H+ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEHRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P + + ++ HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|418634564|ref|ZP_13196957.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
gi|374836787|gb|EHS00364.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
Length = 782
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 231/762 (30%), Positives = 368/762 (48%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K V+E+ GD++ V VQ G +++++ PI + ++ P ++
Sbjct: 647 VLSYGQK-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|308068160|ref|YP_003869765.1| MutS2 protein [Paenibacillus polymyxa E681]
gi|305857439|gb|ADM69227.1| MutS2 protein [Paenibacillus polymyxa E681]
Length = 789
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 230/739 (31%), Positives = 360/739 (48%), Gaps = 88/739 (11%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H +P+ LL L+E LE I CID + LD AS +L IR E + R
Sbjct: 109 LHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSASTELSQIRRELRSGEVRI 167
Query: 63 MENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E LDS+++ +++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA +A+ + Y +D + +D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A+ M P+++ + ++ +HPL+ PL+
Sbjct: 282 ARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PLEQ---- 315
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++
Sbjct: 316 ---------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+DE+G+GT
Sbjct: 361 PVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAVSILEHIHAMGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G +I+ A+ V + R + SL + R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRVEHMIASLEQNRLTAEQE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A L E+ L + E L+ + + K + + ++ A+ + + ++ D
Sbjct: 536 REKAEQLRKEMEALRSRHQTELDKLESQRDRMLEKAEDEARVLVDKARSEAEKIITDLRK 595
Query: 542 --QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
Q AS E + LI + A + + + T T S G++V V SL
Sbjct: 596 LAQEEGASVKE-HKLIAARKELDEAEPKQRKKSTVKRPAATRTRSIMA--GDEVSVHSLN 652
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K VVE+ G + V VQ G M+++V +++ + + A PR++K +G
Sbjct: 653 KK-GHVVELSGTKEAV-VQLGIMKMKVSLDDLELL-----QPAQTTTPRVQKP----VTG 701
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
+ ++ ++ LDLRG VEEA ++D + A + + +IHG GTG
Sbjct: 702 VKRTRDDNV---------RSELDLRGANVEEALMEVDRFMDEAFLANLGQVHIIHGKGTG 752
Query: 718 VVKERVLEILRNHPRVAKY 736
V++ + E LR H V Y
Sbjct: 753 VLRTGIQEYLRKHKHVKSY 771
>gi|168179617|ref|ZP_02614281.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226950552|ref|YP_002805643.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A2 str. Kyoto]
gi|421835524|ref|ZP_16270271.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
gi|254766595|sp|C1FKL4.1|MUTS2_CLOBJ RecName: Full=MutS2 protein
gi|182669561|gb|EDT81537.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226843815|gb|ACO86481.1| MutS2 family protein [Clostridium botulinum A2 str. Kyoto]
gi|409742817|gb|EKN42043.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
Length = 788
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 217/699 (31%), Positives = 352/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL ++L E+ K E AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIENLQEKSIKAEEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V E
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHE 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------ 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
LR + + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 681 ---------LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V KY
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|261408901|ref|YP_003245142.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
gi|261285364|gb|ACX67335.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
Length = 789
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 227/747 (30%), Positives = 372/747 (49%), Gaps = 111/747 (14%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGI 83
LE+ I CID + +LD AS +L IR E + R E L+S+++ + A++ Q
Sbjct: 131 LEDAIRLCID-ETAEVLDSASAELSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ---- 185
Query: 84 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 143
LIT R R + +KA ++ GI + S SGAT F+EP+ V NN E
Sbjct: 186 -DQLITIRGDRFVIPVKAEYRSHF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMRE 243
Query: 144 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
E IL LTA++ + + +D + ++D FA+A A M P ++ + ++
Sbjct: 244 EREIEVILQKLTAQVGEQAELLSIDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKL 303
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+HPL+ P +D VP+D++
Sbjct: 304 RRG------RHPLI----------------P-------------------TDQVVPLDVE 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ +++TGPNTGGKT ++KT+GL +LM+ +GL++PA+ ++ FD I ADIGD Q
Sbjct: 323 LGNSYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ R+G
Sbjct: 383 SIEQSLSTFSSHMTNIIRILSQMTPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGC 441
Query: 384 AVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
++ TTHY++L + NA+ EF + TL PTYR+L G G SNA IA+ +G
Sbjct: 442 RMIATTHYSELKAYAYERKGVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPG 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
I++ A+ V + + R + SL E R E + A + E+ +L + + E
Sbjct: 502 SILEFARGEV-----KEEDQRVEHMIASLEENRHTAEVEREKAEQVRKEMEELRQRHQQE 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ L+ + L K + +Q ++ A+ + + ++ D LR + +E S +KE +
Sbjct: 557 LQKLEEQKDKLVDKARAEARQIVDKARSEAEEIIAD----LRKIAQEEGAS-VKEHK--- 608
Query: 563 AAIVEAHRPDDDFSVSETNTS----------SFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++ A + DD + + S P G++V V SL K VVE+ G
Sbjct: 609 --LIAARKRLDDAEPQQGKKTGGQRSAKQQRSIEP--GDEVRVYSLNQK-GHVVEMSGSK 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+ V VQ G M+++V +++ + N P +Q +Q + +A+
Sbjct: 664 EAV-VQLGIMKMKVALDDLELLSN----------PAANAKQAPKQHATVLKRTRDANI-- 710
Query: 673 RVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+N LDLRG +EEA ++D I A + +++IHG GTG+++ + + LR H
Sbjct: 711 -----RNELDLRGANLEEALIEVDRFIDEAFLGNLGQIYIIHGKGTGILRTGIQDYLRKH 765
Query: 731 PRVAKYEQESPMNY-----GCTVAYIK 752
V + NY G T+A +K
Sbjct: 766 KHVKSHRLG---NYGEGGNGVTIAELK 789
>gi|227513131|ref|ZP_03943180.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
gi|227083706|gb|EEI19018.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
Length = 788
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 224/725 (30%), Positives = 347/725 (47%), Gaps = 99/725 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
ILD AS +L IR R ++ S + K + G K L IT R R + I
Sbjct: 147 ILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKYLTESIITMREDRFVLPI 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
+A +K GI + S+SG T ++EP VE NN R +E AEE IL+ LT I
Sbjct: 202 RADYKQHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEERRILAELTDLIR 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
E+ M+ V ++D A+A FA + V P +S D+ +N+ +HPL+
Sbjct: 261 PYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EISRDNVVNLRQARHPLIAR 314
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ V DI++ E R ++ITGPNTG
Sbjct: 315 GKV-----------------------------------VANDIQIGDEYRTIIITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I
Sbjct: 340 GKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 400 ISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGCELIATTHYPELKAYAYN 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF +ETLRPTYR L G G SNALNIA +G + II++A+ + +
Sbjct: 460 RSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSKGIIEKARAFTDSENQDI 519
Query: 460 QQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
Q+ +E +L+ Q + LH ++ + + + +++ KD HL +
Sbjct: 520 NNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQNQ-KD------HLLEQA 572
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAI----VEAHRP 571
+Q Q + AK+ D ++ D + + S IKE+E A A+ V +
Sbjct: 573 REQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENELIDAKGALNRLEVTPNLK 628
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+ E F P G++V VKS G + + + + VQ G +++++ +N++
Sbjct: 629 KNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK--NGAWEVQLGILKMQIDENDL 684
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
K A + + Q + ++ S+G S P +LDLRG R EEA
Sbjct: 685 -------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-------TLDLRGHRYEEA 723
Query: 692 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCT 747
++LD I A + +IHG GTG +++ V E LR++ R+ + +P G T
Sbjct: 724 MYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNARIKSFGYSAPNAGGDGST 783
Query: 748 VAYIK 752
V K
Sbjct: 784 VVKFK 788
>gi|123967774|ref|YP_001008632.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. AS9601]
gi|123197884|gb|ABM69525.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. AS9601]
Length = 803
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 224/728 (30%), Positives = 359/728 (49%), Gaps = 101/728 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL-------ITKRRSRMC 96
I D AS +L ++R E L KK+ +I I K L I R R
Sbjct: 158 ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTTIGDRYGRPV 208
Query: 97 VGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +K ++ K+ GI + SSSG T + EP+ V N L AEE +L
Sbjct: 209 LAVKVNYVDKF---KGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEEFKLLKKW 265
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
+ ++ + + + + +L ++ A R+ +++W+ G P +S + G H
Sbjct: 266 SHVVSDNSKNLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS------LIGFSH 319
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PLL+ + KG PV +D + +VV IT
Sbjct: 320 PLLIWEHKK---------------------------KGAPP-PVAVDFYINRNIKVVAIT 351
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+NLSTFSG
Sbjct: 352 GPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTFSG 411
Query: 335 HISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 391
HISRI IL+ + + S+VL+DEIGSGTDP EG ALA ++L+ ++ + + TTHY
Sbjct: 412 HISRIKGILDSLDYKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDITLATTHYG 471
Query: 392 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 451
D+ LK D+RFEN + F E+L+P Y + WG G SNAL+I+K IG D I+ A
Sbjct: 472 DIKALKYNDSRFENVSVAFDEESLKPKYILNWGIPGRSNALSISKRIGLDESILNEA--- 528
Query: 452 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
L+P+ + S + + L EER K ++ A AA L A L+ E++ + A
Sbjct: 529 ANYLKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYEHQKINAQ 587
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAAIV 566
++ E ++ + + AK + V D +LRD + + I +KE E+
Sbjct: 588 KIQELERSKLSKHIISAKKE----VIDLIKKLRDKNVNGEDTRIIGKRLKEIETEHLTQK 643
Query: 567 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
++ + + S+ PQ G+ V +KSL + +V++ V+ G R +
Sbjct: 644 KSEK-----------SISWNPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKCGSFRSTL 691
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
N+ I N P ++ K + ++ E+ S+ +++TSKN++D+RG+
Sbjct: 692 SANDFEGI------NGEKPNFKMSKIE-------IKATREDFSFS-KIRTSKNTIDVRGL 737
Query: 687 RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
RV EA ++ + + L+++HG+GTG +K+ + L V K E +
Sbjct: 738 RVHEAEIIIEEKIRRF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDAANNEGGP 795
Query: 745 GCTVAYIK 752
GC++A+IK
Sbjct: 796 GCSIAWIK 803
>gi|418324592|ref|ZP_12935826.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
gi|365225279|gb|EHM66524.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
Length = 783
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 229/755 (30%), Positives = 357/755 (47%), Gaps = 105/755 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
Y L E + LT+L I D L D AS L+ IR++ +R +NLD
Sbjct: 119 YPILHERMNELPVLTDLYRTIHDKCDAHDL--YDHASTTLQSIRSKISSTSQRIRQNLDR 176
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++K + Q + ++T R R + +KA ++ +GI + SSSG T ++EP
Sbjct: 177 IVKSQSNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSS 231
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQW 187
VE NN RL N E E IL+ LTAE+A ++ + + ++++ +ID A+A +A+
Sbjct: 232 VVEMNNQISRLRNDEAVERERILTELTAEVA-ADADGCLIAEQIMGQIDFLTAKARYARK 290
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ P + D S+ + HPLL +N+ DVE
Sbjct: 291 IKATKPEFTE------DRSVYLPKAFHPLL------DQETVVANTIEFAEDVE------- 331
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M++AGL +P +
Sbjct: 332 ----------------------TVIITGPNTGGKTVTLKTLGLIIIMAQAGLLIPTLDGS 369
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F+ + DIGD QS+EQ+LSTFS H+ IV ILE ++ SL+L DE+G+GTDPSEG
Sbjct: 370 KLGIFENVYCDIGDEQSIEQSLSTFSSHMKNIVSILEEATQNSLILFDELGAGTDPSEGA 429
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y+ D L + TTHY +L NA+ EF + TL PTY++L G G
Sbjct: 430 ALAMSILDYVHDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPG 489
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA +I+K +G KII +A+ ++ + + + +SL + ++++ Q
Sbjct: 490 RSNAFDISKKLGLGMKIISKAKTMI-----GHDEQEINNMIESLEKNSKRVDEQRIELDR 544
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E D + ++E K HL + + Q + A + D +++D +
Sbjct: 545 LLREAQDTHDDLEQHYKKFKNYEQHLMNEARDKANQRVKAATKEADQILKDLRHMRDKKG 604
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDK 601
AD +KE E +++ + +D ++ Q G++V V + G K
Sbjct: 605 AD-----VKEHE-----LIDKKKHLEDQYEEKSLKKDVKKQKWDEIHAGDEVKVLTYGQK 654
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
V+E+ GDD+ V VQ G +++++ ++ K++ R
Sbjct: 655 -GEVLELVGDDEAV-VQMGIIKMKLPLKDLEKKKKEKQQPTKMVKRHNR----------- 701
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
Q K LDLRG R EEA +LD L A + +++IHG GTG +
Sbjct: 702 -------------QNVKMELDLRGYRYEEALVELDQYLDQAVLSNYEQVYIIHGKGTGAL 748
Query: 720 KERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
++ V E L+ H VA Y P +G TVA +K
Sbjct: 749 QKGVQEHLKRHKSVASYRNGMPSEGGFGVTVAQLK 783
>gi|398818390|ref|ZP_10576981.1| MutS2 family protein [Brevibacillus sp. BC25]
gi|398027832|gb|EJL21362.1| MutS2 family protein [Brevibacillus sp. BC25]
Length = 785
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 226/726 (31%), Positives = 363/726 (50%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L ELE +I CID ILD AS +L +R E + L+S +++ Q+ ++ K
Sbjct: 128 LRELETEIRRCIDENG-DILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQK 182
Query: 86 PL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
L +T R R + +K ++ + GI + S+SGAT F+EP+ VE NN L
Sbjct: 183 MLMENIVTIRGDRFVIPVKQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRL 241
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT +++ + + + + E+D FA+A A M +CP ++ + +V
Sbjct: 242 REEREVERILYVLTEQVSFAVEALIENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV 301
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
N+ +HPL+ P + VP+D
Sbjct: 302 ------NMRKARHPLI----------------P-------------------REVVVPVD 320
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ E + +V+TGPNTGGKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD
Sbjct: 321 VELGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGD 380
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ I+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D
Sbjct: 381 EQSIEQSLSTFSSHMTNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSG 440
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY++L NA+ EF ++TLRPTYR+L G G SNA IA+ +G
Sbjct: 441 ARLVATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLP 500
Query: 442 RKIIQRAQ-------KLVERLRPERQQHRKSELYQSLMEE--RRKLESQARTAASLHAEI 492
II A+ VE + +++RKS SL + R++ E R A+
Sbjct: 501 EHIIDVARGSISEEDNQVESMIASLERNRKSAEADSLAAKAARQEAEELRRQLEEERAQF 560
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
+ + + A+D R A L +E + + +EL + + ++ E++L DA N
Sbjct: 561 AEEKNKRMERAEDEARIAVQLAKEEAETIIREL---REMMAEGMEIKEHRLIDAKKRLGN 617
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++++ + + +A R + + G++V V S G K TV+E ++
Sbjct: 618 AVLELEKEKVKKPAKAVR-------------ATQIKVGDEVMVTSFGQK-GTVLEKVNNE 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+ LVQ G M+++VK++++ + ++K A P +++
Sbjct: 664 E-FLVQIGIMKMKVKRDDMHVQNSIQQKPQAAPYTSVKR--------------------- 701
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
R K LDLRG VE++ ++D L A + +IHG GTGV+++ V E LR+H
Sbjct: 702 RSDNIKMDLDLRGYNVEDSIREIDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYLRSH 761
Query: 731 PRVAKY 736
V +
Sbjct: 762 RNVKSF 767
>gi|310658450|ref|YP_003936171.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
gi|308825228|emb|CBH21266.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
Length = 793
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 360/728 (49%), Gaps = 74/728 (10%)
Query: 14 SPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+P+L+ L +N L +LE++I I + I D AS +L +R E + L
Sbjct: 117 TPILQQLSENITILKDLEDEIDNAIISEEEI-SDNASPELSKVRRSITNTKEQIRQKLSS 175
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + + + + ++T R+ R V +KA ++ +P GI + SSSGAT F+EP VE
Sbjct: 176 IVSSSQYSKYLQEAIVTMRQDRFVVPVKAENRSNVP-GIVHDSSSSGATLFIEPMAVVEM 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN E E IL++L+A S EI+ + EID A+ + M
Sbjct: 235 NNKLREYKVKEQEEIERILTVLSAMAGLSYHEIRTNEQMIAEIDFIMAKGKLSVKMKAQE 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P ++S D +N++ +HPL+ D +N
Sbjct: 295 PFINS------DLVMNLKNARHPLI--------------------DPKNV---------- 318
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP +I + E +VITGPNTGGKT ++KT+GL ++M+++GL+LP + F
Sbjct: 319 -----VPSNINIGKEFDTLVITGPNTGGKTVTLKTIGLFAIMAQSGLHLPTDYGTSICIF 373
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
D I ADIGD QS+EQ+LSTFS H++ IV+IL+ V LVL DE+G+GTDP EG ALA S
Sbjct: 374 DNIFADIGDEQSIEQSLSTFSSHMTHIVNILDEVKDNCLVLFDELGAGTDPLEGAALAVS 433
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL LR+ + V TTHY++L R ENA+ EF ++TL PTYR+L G G SNA
Sbjct: 434 ILDRLREYKLITVATTHYSELKHYALTTNRVENASVEFDVQTLSPTYRLLIGIPGKSNAF 493
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 492
I++ +G +II L + + ++ + + + R+++E++ + ++ +
Sbjct: 494 EISRKLGLKEEII-----LAAKHHLDSDSISMEDVLKEIDDNRKQIETEREQSRIIYEDA 548
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
L ++++ LD + + + + ++ L AK + D +++ + A IN
Sbjct: 549 KKLQTRLKEKESKLDTQKDKIIQEAKNEARKLLQQAKEEADEAIKELRELSKRAEKQNIN 608
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPG 610
I+ S I ++ + + ++E + + G++V+V S K ATVV V
Sbjct: 609 KEIEASRRKIKTSLDKYGYKNQDLITEKDVINPVDIIVAGDEVYVPSFS-KNATVVSVDN 667
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D LVQ G M++ + +++ RL++ ++ +S AG +
Sbjct: 668 DKKEALVQIGIMKLNLPFSSLE---------------RLKQNEDIVKSSGAGKIMKN--- 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
+ T++ +DLRGM +E A ++D L + + +IHG+GT V+K + +L+
Sbjct: 710 --KTATAELEIDLRGMDLETARIEVDKYLDNSYVAGLPRVTIIHGVGTLVLKNGIKAMLK 767
Query: 729 NHPRVAKY 736
+H V Y
Sbjct: 768 SHKHVKSY 775
>gi|187776956|ref|ZP_02993429.1| hypothetical protein CLOSPO_00500 [Clostridium sporogenes ATCC
15579]
gi|187775615|gb|EDU39417.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes ATCC 15579]
Length = 788
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 220/702 (31%), Positives = 356/702 (50%), Gaps = 85/702 (12%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE ILS+L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG KHPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-KHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ +PI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------IPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKA-K 516
+ R EL Q+L E+ K + AR A +L E ++ E++ + L R A + A +
Sbjct: 512 ENIRFEELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNAFIDARR 571
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
E + + +E AK + D +++D R + + ++E + +++ + +
Sbjct: 572 EAKNIIRE---AKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKT 628
Query: 577 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
V + + G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 629 VHKGEALKNVKE-GDEVLLVSINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD--- 680
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
LR + + ++ + + ++S+DLRGM EEA + +D
Sbjct: 681 ------------LRAAKGSNSNSNSSKIKKSKKLNLNLSRVESSVDLRGMDAEEAIYTVD 728
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L A + ++HG GTGV+++ ++++L+ HP V ++
Sbjct: 729 KYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRH 770
>gi|325681531|ref|ZP_08161056.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
gi|324106798|gb|EGC01089.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
Length = 801
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 223/699 (31%), Positives = 329/699 (47%), Gaps = 95/699 (13%)
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
E LD ++K + Q + + + ++T R R V +K K + G+ S++G+T F
Sbjct: 169 ETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHGTSATGSTLF 223
Query: 124 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 183
+EP VE NN L E E IL+ + E A + +I+ D +++DL FA+A
Sbjct: 224 IEPISVVEANNDIRILQGKEQDEIHRILTEFSKECAMMQPQIESSYDAAVKLDLYFAKAN 283
Query: 184 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
M V P +S D I + +HPL+ + N +
Sbjct: 284 LGAKMRAVNP------EISDDGVIVLNKARHPLI-------------DENKV-------- 316
Query: 244 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 303
VPI+ V+VITGPNTGGKT ++KT+GL +LM+ GL +PA
Sbjct: 317 --------------VPINFSSGESYNVLVITGPNTGGKTVTLKTVGLLTLMTMCGLLIPA 362
Query: 304 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 363
+ R+ + ILADIGD QS+EQ+LSTFS H+ + +ILE ESLVLIDE+GSGTDP
Sbjct: 363 SDGCRISVYKKILADIGDRQSIEQSLSTFSSHMGNVREILEKADSESLVLIDELGSGTDP 422
Query: 364 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
EG ALA SI++ LR V TTHY ++ ENA+ EF +ET++PTY+++
Sbjct: 423 VEGAALAVSIIERLRQFGATVVTTTHYQEIKLYALDTDGVENASCEFDVETMKPTYKLVI 482
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 483
GS G SNA I+K++G D II A+ L+ R + +L R +LE R
Sbjct: 483 GSPGKSNAFAISKNLGIDDDIIAYAEGLI-----SEDNRRFETIIDNLERARIQLEENNR 537
Query: 484 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
A AE L E+E++ K K + + EL A+ Q +V + +
Sbjct: 538 LAEKYRAEAEKLRNELEEQRK-----------KFYDEKENELEKARRQASDIVNRVQRES 586
Query: 544 RDASADEINSLIKESESA---IAAIVEAHRPDDDFS--------VSETNTSSFT-P---Q 588
+ A DE++ L KE E + AI H+ + VSE + P +
Sbjct: 587 Q-ALVDELDQLRKEKEKSGFTQKAIDARHKQKSTMNKLYKEANPVSEQADDDYVLPRPLK 645
Query: 589 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
G+ V + + VV P D VQ G M+ ++ +R + K++ P P+
Sbjct: 646 KGDTVLITDT-KRNGIVVTPPDDKGMCFVQAGIMKTKIDVKKLRLV--EKKQPVKTPQPQ 702
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 706
+K R + G N R T LD+RG +E H++D I S
Sbjct: 703 KKKP---RGVSTKGVENRMTR---RFST---ELDIRGYASDEGVHEMDSFIDNCVMSGVS 753
Query: 707 VLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
++ VIHG+GTGV+K + LR HP V + P YG
Sbjct: 754 MVTVIHGIGTGVLKNAIRNHLRRHPSVKSFR---PGVYG 789
>gi|418411583|ref|ZP_12984850.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
gi|420167521|ref|ZP_14674174.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|394238147|gb|EJD83630.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|410892309|gb|EKS40103.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
Length = 782
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 230/756 (30%), Positives = 363/756 (48%), Gaps = 105/756 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL+ LT ++ + + +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGLVSADSDALLVAESVMGQIDFLIAKARYART 289
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P D +I + HPLL +N+ DVE
Sbjct: 290 IKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------- 330
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 ----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGS 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 369 QLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGA 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G
Sbjct: 429 ALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTA 485
SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R A
Sbjct: 489 RSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREA 548
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
H + Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 600
E +KE E I + + DD + ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQ 652
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 719 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V +Y P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQYRGGMPSEGGFGVTVAELK 782
>gi|317056492|ref|YP_004104959.1| MutS2 family protein [Ruminococcus albus 7]
gi|315448761|gb|ADU22325.1| MutS2 family protein [Ruminococcus albus 7]
Length = 802
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 222/699 (31%), Positives = 333/699 (47%), Gaps = 94/699 (13%)
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
E LD ++K + Q + + + ++T R R V +K K + G+ S++G+T F
Sbjct: 169 ETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHGTSATGSTLF 223
Query: 124 MEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
+EP VE NN EVR L E E IL+ + E A + +I+ D +++DL FA+A
Sbjct: 224 IEPISVVEANN-EVRILQGKEQDEIHRILTDFSKECAMMQPQIESSYDAAVKLDLYFAKA 282
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
A M V P +S D I + +HPL+ + N +
Sbjct: 283 NLAAKMRAVDP------EISDDGIIVLNKARHPLI-------------DENKV------- 316
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
VPI+ + + V+VITGPNTGGKT ++KT+GL +LM+ GL +P
Sbjct: 317 ---------------VPINFRSGTDYNVLVITGPNTGGKTVTLKTVGLLTLMTMCGLMIP 361
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A + ++ + ILADIGD QS++Q+LSTFS H+ ++ DI++ ESLVLIDE+GSGTD
Sbjct: 362 ASDGCKISVYKNILADIGDRQSIQQSLSTFSSHMGKVKDIIDKADHESLVLIDELGSGTD 421
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P EG ALA SI++ LR V TTHY ++ ENA+ EF ++T+RPTY+++
Sbjct: 422 PVEGAALAVSIIERLRQVGATVVTTTHYQEIKMYALDTDGVENASCEFDVDTMRPTYKLV 481
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
GS G SNA I+K++G D II A+ L+ + R + L + R LE
Sbjct: 482 IGSPGKSNAFAISKNLGIDDDIIDYAKSLISE-----ENRRFEHIIDDLEKARISLEENN 536
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
A E L E++++ K K ++ + EL A+ Q +V + +
Sbjct: 537 LLAEKYRKEAESLRNELDEQ-----------KQKFMEEKEFELEKARRQASDIVNRVQRE 585
Query: 543 LRDASADEINSLIKESESA---IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSL 598
+ A DE++ L KE E AI + + + T Q E V + L
Sbjct: 586 SQ-ALVDELDKLRKEKEKTGFTQKAIDARQKQRSTMNKLYLEANPVTQQTDEDYVLPRPL 644
Query: 599 --GDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
GD + VV P D VQ G M+ ++ +R + + PA
Sbjct: 645 KKGDTVLITDTKRNGIVVTPPDDKGMCFVQTGIMKTKIDVKKLRLVEKQQ------PAKT 698
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 706
+KQQ ++ G + E+ R T LD+RG +E H++D I S
Sbjct: 699 SQKQQTKKKRG-VSTKGVESRMTRRFSTE---LDIRGYASDEGIHEMDSFIDNCVMSGIS 754
Query: 707 VLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
++ +IHG+GTGV+K V LR HP V Y P YG
Sbjct: 755 MVTIIHGIGTGVLKNAVRNHLRRHPSVKSYR---PGVYG 790
>gi|242373376|ref|ZP_04818950.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
gi|242348739|gb|EES40341.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
Length = 782
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 233/757 (30%), Positives = 372/757 (49%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L E + L++L ++I C + D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILDEKMNQLPVLSDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQSNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++A +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGQVA-AEADALLIAESVMGQIDFLTAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P + V ++ HPLL N E V
Sbjct: 289 SIKGTKPTFKKERTVYLPNAF------HPLL-----------------------NKETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ + I D ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 ANTIEFIDD----------VET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R+ L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S S + E+R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKRVDEQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D+++++ + LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADSILKELRD-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + D+ + + ++ G++V V S G
Sbjct: 600 DNKGVE----VKEHE----LIDKKKQLDEQYEEKSIKQNVQKKKYDKINAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA +LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALTELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVSNFRGGMPSEGGFGVTVAELK 782
>gi|146296717|ref|YP_001180488.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|238685558|sp|A4XK62.1|MUTS2_CALS8 RecName: Full=MutS2 protein
gi|145410293|gb|ABP67297.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 787
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 215/712 (30%), Positives = 362/712 (50%), Gaps = 104/712 (14%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E+ L+S+++ Q F + +P+IT R ++ +
Sbjct: 142 ILDTASPRLKEIR-DRIRKLESRIRDELNSMIRDPKIQRF----LQEPIITIRGEKLLLP 196
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAE 157
+KA + + GI + S++GAT F+EP VE +N ++R+ S+ EE IL +++
Sbjct: 197 VKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEISN-QIRILKSQEKEEIERILQEISSL 254
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
IA EI+ ++E+D+ F +A +A+ M+ P++++ IN++ +HPL+
Sbjct: 255 IASYCDEIETSFYALVELDIVFTKAIWAKEMNASKPVINTSG------IINLKKARHPLI 308
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
D VPIDI + + V++ITGPN
Sbjct: 309 Q-----------------------------------KDKVVPIDIHLGKDFDVLIITGPN 333
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L+ ++G+++PA +L F I ADIGD QS+ Q+LSTFS H+
Sbjct: 334 TGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCIFQKIFADIGDDQSIVQSLSTFSAHMK 393
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + ++LVL+DEIG+GTDP EG ALA +IL+YL ++ + TTHY +L
Sbjct: 394 NIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGELKIFA 453
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----QKLV 452
++ RFENA+ EF ++TL+PTYR+L G G SNAL I+ ++G D+ I++ A QK +
Sbjct: 454 QQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTI 513
Query: 453 --ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 510
+R+ E +Q RK + + KLE+QA AA E+E K +
Sbjct: 514 DLDRIINEMEQKRKEAEENLELARKLKLEAQALKAA------------YEEEKKRFETER 561
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDF----ENQLRDASADEINSLIKESESAIAAIV 566
++ K + ++ + A+ +I+ + +D EN E+ +E E I +I
Sbjct: 562 ERIRKKAINEAKEIVERAQYEIENLFKDLRKLAENLKEKEVLKELEEKKREYERLIQSIS 621
Query: 567 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
+ + + + S+T + + G++V+V+S D + V +P + VQ G M++ V
Sbjct: 622 QQEKQEAE---SKTKKTLQNIRLGQKVYVRSF-DAVGFVESLPDSKGNLTVQIGIMKLNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
N ++ +++ Q+ S E S S+D+RG
Sbjct: 678 --------------NISDIEEVEEGEKKVYQTTSKNVKLREKSVDL-------SIDVRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++A +D L A + +IHG GTGV+++ + L+ HP V +
Sbjct: 717 TSDDAILDVDKYLDDAYTSGLRQVTIIHGKGTGVLRQAIRNFLKRHPLVKSF 768
>gi|417910746|ref|ZP_12554462.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|418622194|ref|ZP_13184950.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|420187633|ref|ZP_14693653.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
gi|341654934|gb|EGS78670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|374827569|gb|EHR91431.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|394256075|gb|EJE01011.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
Length = 782
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 231/757 (30%), Positives = 366/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAH 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNTFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|315658547|ref|ZP_07911419.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
gi|315496876|gb|EFU85199.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
Length = 783
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 224/756 (29%), Positives = 359/756 (47%), Gaps = 106/756 (14%)
Query: 13 YSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
Y PLL + + LT+L ++I D L D AS +L+ IR++ +R +NLD
Sbjct: 118 YYPLLHDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLD 175
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ GI + S+SG T ++EP
Sbjct: 176 RIVKNQSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPS 230
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL++LT +A+ + + + +D A+A +A
Sbjct: 231 SIVEMNNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASA 290
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + ++ HPLL +N+ DVE
Sbjct: 291 IKGTKPTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------- 331
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 332 ----------------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGS 369
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F + DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG
Sbjct: 370 QLSVFHDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGA 429
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y R L + TTHY +L NA+ EF ++TL PTY++L G G
Sbjct: 430 ALAMSILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPG 489
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA +I+K +G + II +A+ ++ E +LM E LE A+ +
Sbjct: 490 RSNAFDISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDT 537
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
E+ L +E + DL+++ +A E Q ++ + A ++ ++ + L++
Sbjct: 538 QRIELDHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELR 597
Query: 548 A--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 600
D+ + +KE E I + + D+ + ++ G++V V S G
Sbjct: 598 TLRDQKGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQ 653
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K V+E+ G+D+ V VQ G +++++ I + +K+K P +++Q
Sbjct: 654 K-GEVLELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQHR------ 701
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
QT K LD+RG R EEA +LD L A + +++IHG GTG
Sbjct: 702 --------------QTIKTELDIRGHRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGA 747
Query: 719 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V + P +G TVA +K
Sbjct: 748 LQKGVQQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|169343643|ref|ZP_02864642.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
gi|169298203|gb|EDS80293.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
Length = 786
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSRPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|420210593|ref|ZP_14716016.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
gi|394276044|gb|EJE20400.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
Length = 782
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 231/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKGTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DYKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|315917841|ref|ZP_07914081.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
gi|313691716|gb|EFS28551.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
Length = 778
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 223/757 (29%), Positives = 372/757 (49%), Gaps = 106/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + +K + L +E+ I ID + I D AS DL IR +K +N+
Sbjct: 112 KYKALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFD 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + + + +IT+R RM V +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFEEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 230 LNNKMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG------ 283
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
L HV P++ G + L A P K V
Sbjct: 284 ---LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV------------ 314
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +
Sbjct: 315 ------VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGF 368
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A
Sbjct: 369 FQGVFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAM 428
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SI+ YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNA
Sbjct: 429 SIIDYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNA 488
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQA---RT 484
L IAK +G ++II++AQ + + ++K EL ++ E K++++ R
Sbjct: 489 LTIAKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQTELTGLRE 542
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AA ++ E + E+E K L+R + K + ++ +N + + +++ + +
Sbjct: 543 AAKMNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE-- 594
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKL 602
+ S ++ K+ + + + A + + + +++ T F G++V VK++ ++
Sbjct: 595 EHSKEQA----KQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQF 649
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
ATV+++ ++ VQ G +++ V P +R +E +
Sbjct: 650 ATVLKINAMKESAQVQAGILKLEV------------------PFEEIRVTEEKK------ 685
Query: 663 SSNEEASYGPRVQTS---KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
E +Y +V ++ +DLRG VEE H+L+ L A ++VIHG GTG
Sbjct: 686 ----EKTYQVQVHKKIAVRSEIDLRGKMVEEGIHELETYLDRALLNGYHEIYVIHGKGTG 741
Query: 718 VVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
++ +LE L+ P V Y GCTV +K
Sbjct: 742 ALRNGILEYLKTCPYVKDYRIGGHGEGGLGCTVVTLK 778
>gi|170761509|ref|YP_001788443.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A3 str. Loch Maree]
gi|238688791|sp|B1L0S3.1|MUTS2_CLOBM RecName: Full=MutS2 protein
gi|169408498|gb|ACA56909.1| MutS2 family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 788
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 360/717 (50%), Gaps = 81/717 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSILYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KVEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL Q+L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKG 686
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
N + ++ + + ++ ++S+DLRGM EEA + +D L
Sbjct: 687 SNF---------------NINSSKTKKSKKLNLNLRKVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++HG GTGV+++ ++++L+ HP V ++ + G TV IK
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRHRLGEYGEGGTGVTVVEIK 788
>gi|418616514|ref|ZP_13179438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|420182831|ref|ZP_14688964.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|420214358|ref|ZP_14719637.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|420217164|ref|ZP_14722348.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
gi|374820592|gb|EHR84668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|394249294|gb|EJD94507.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|394283723|gb|EJE27888.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|394290520|gb|EJE34375.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
Length = 782
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 231/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|168214914|ref|ZP_02640539.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
gi|170713649|gb|EDT25831.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|168215509|ref|ZP_02641134.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
gi|182382254|gb|EDT79733.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|110799497|ref|YP_696563.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens ATCC 13124]
gi|123344633|sp|Q0TP77.1|MUTS2_CLOP1 RecName: Full=MutS2 protein
gi|110674144|gb|ABG83131.1| MutS2 family protein [Clostridium perfringens ATCC 13124]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|168206066|ref|ZP_02632071.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
gi|170662410|gb|EDT15093.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|317059473|ref|ZP_07923958.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
gi|313685149|gb|EFS21984.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
Length = 778
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 223/757 (29%), Positives = 372/757 (49%), Gaps = 106/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + +K + L +E+ I ID + I D AS DL IR +K +N+
Sbjct: 112 KYKALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFD 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + + + +IT+R RM V +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFEEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 230 LNNKMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG------ 283
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
L HV P++ G + L A P K V
Sbjct: 284 ---LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV------------ 314
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +
Sbjct: 315 ------VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGF 368
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A
Sbjct: 369 FQGVFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAM 428
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SI+ YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNA
Sbjct: 429 SIIDYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNA 488
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQA---RT 484
L IAK +G ++II++AQ + + ++K EL ++ E K++++ R
Sbjct: 489 LTIAKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQAELTGLRE 542
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
AA ++ E + E+E K L+R + K + ++ +N + + +++ + +
Sbjct: 543 AAKMNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE-- 594
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKL 602
+ S ++ K+ + + + A + + + +++ T F G++V VK++ ++
Sbjct: 595 EHSKEQA----KQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQF 649
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
ATV+++ ++ VQ G +++ V P +R +E +
Sbjct: 650 ATVLKINAMKESAQVQAGILKLEV------------------PFEEIRVTEEKK------ 685
Query: 663 SSNEEASYGPRVQTS---KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
E +Y +V ++ +DLRG VEE H+L+ L A ++VIHG GTG
Sbjct: 686 ----EKTYQVQVHKKIAVRSEIDLRGKMVEEGIHELETYLDRALLNGYHEIYVIHGKGTG 741
Query: 718 VVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
++ +LE L+ P V Y GCTV +K
Sbjct: 742 ALRNGILEYLKTCPYVKDYRIGGHGEGGLGCTVVTLK 778
>gi|333896863|ref|YP_004470737.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112128|gb|AEF17065.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 209/659 (31%), Positives = 334/659 (50%), Gaps = 84/659 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLIHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ LT ++ K EI M + E+D+ FA+A ++ D PIL+++ +V
Sbjct: 243 EVERILAELTEDVGKHVDEINENMVVLKELDVIFAKAKYSISTDSTKPILNTKGYV---- 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
N++ +HPL+ SK D VPI I +
Sbjct: 299 --NLKNARHPLI--------------------------------SK---DAVVPISIHLG 321
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + +FD I DIGD QS+
Sbjct: 322 ESFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADEGSDVAFFDNIFVDIGDEQSI 381
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + +I
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDVI 501
Query: 446 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
A+ + E L+ E ++ + L +R + E+ +L ++ L +E E +
Sbjct: 502 DNAKSYITSEELKFE-------DILKDLENKRIEAENAKEEIEALKNQVESLRQEYEKKI 554
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 562
KD +R + K ++ ++ L K D ++ +L++A +D+ N LI+E+ +
Sbjct: 555 KDTEREREKIIEKAREKAKKILENTKATADEIIA----KLKEAEKSDKKNKLIEEARLKL 610
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ + ++ SE P+ G+ +++ L D+ + P D V +Q
Sbjct: 611 KENI--NEMEESLKKSEIPEYKKVPKDVMPGQTLYIVPL-DQTGIALSEPDKDGNVKIQA 667
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V +N+R ++++ + G A NE+++ + T
Sbjct: 668 GILKMNVHISNLR--------------ETESSEEKEMEKGFAKYINEKST---NIST--- 707
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+DLRG +EEAS ++D L A + VIHG GTG ++ + +L+ + V +
Sbjct: 708 SIDLRGKTLEEASIEVDKYLDDAYLAGLKQVTVIHGKGTGTLRSGITRLLKMNKHVKSF 766
>gi|292670925|ref|ZP_06604351.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
gi|292647546|gb|EFF65518.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
Length = 785
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 218/714 (30%), Positives = 344/714 (48%), Gaps = 81/714 (11%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R + L ++L Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITCELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + S+SGAT F+EP VE NNM +L + E IL LTAEIAK+
Sbjct: 200 EYRNYFP-GVIHDQSTSGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKN 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 259 ADILADNCKILAEIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
D VPIDI++ +++ITGPNTGGK
Sbjct: 310 --------------------------------KDKVVPIDIELGSAFSILLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L
Sbjct: 398 IIEKAEPGDLILLDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQP 457
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
+NA+ EF L TLRPTYR+L G G SNA +I++ +G + I+QRA+ + E
Sbjct: 458 GIQNASVEFDLNTLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHM 513
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
H ++ +L ++++ E + E+ L + + ++ + R ++ K ++
Sbjct: 514 HF-DKVINALEQKKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEA 572
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSET 580
+ A+ + ++ + Q D E +I+++ + + A V+ + P ++ S+ +T
Sbjct: 573 NNIIRDARRTAEETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKT 631
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
S + G+ V+++SL + TV+ V D ++VQ G +R +K N I + K K
Sbjct: 632 VRPS-EIRNGDIVYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSK 687
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 698
N G+S S R Q +D+RGM V EA L I
Sbjct: 688 KDTNKV-------------HIGASISRKSVEIRPQ-----IDVRGMTVSEAESVLGKFID 729
Query: 699 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
A + S + +IHG GTG +++ + L+++ V + G V +K
Sbjct: 730 DAVFTGLSKVLLIHGKGTGALRKGLQNYLKHNKFVLSFSFADISEGGTGVTIVK 783
>gi|153932430|ref|YP_001385445.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936995|ref|YP_001388852.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. Hall]
gi|229486367|sp|A7FY72.1|MUTS2_CLOB1 RecName: Full=MutS2 protein
gi|152928474|gb|ABS33974.1| MutS2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152932909|gb|ABS38408.1| MutS2 family protein [Clostridium botulinum A str. Hall]
Length = 788
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 352/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL Q+L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------ 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
LR + + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 681 ---------LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V KY
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|299535519|ref|ZP_07048840.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|424739203|ref|ZP_18167624.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
gi|298728719|gb|EFI69273.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|422946841|gb|EKU41246.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
Length = 788
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 229/729 (31%), Positives = 352/729 (48%), Gaps = 107/729 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L+ +I CID +LD AS+ L IR AE + L+SL++ A A
Sbjct: 131 LTGLQHEINNCIDDNG-AVLDSASQTLRSIRQSLRAEEGKVRSKLESLIRGSNA----AK 185
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +++ GI + SSSG T F+EP V+ NN RL
Sbjct: 186 MLSDTLVTIRNDRFVIPVKQEYRHHY-GGIVHDQSSSGQTLFIEPDSVVQANNEIHRLKM 244
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE IL L+A + + ++ L+ + +ID+ A+ + Q P ++
Sbjct: 245 KEQAEIERILLALSAMVQEVASDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ---- 300
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I + +HPLL P+ D +P D
Sbjct: 301 --DGYIRLIRARHPLL----------------PI-------------------DSAIPND 323
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I+ + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + L F+ + ADIGD
Sbjct: 324 IEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSELAVFEQLFADIGD 383
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ESLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 384 EQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELGAGTDPQEGAALAISILDEVHGRG 443
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTYR+L G G SNA I+ +G
Sbjct: 444 ARVMATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSNAFEISSRLGLP 503
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II RA+ R H + SL E RR+ E A + +L E L +E++D
Sbjct: 504 ESIIDRAKGFTGTDR-----HEVESMIASLEETRRQSEDDAERSHALLLESETLRKELQD 558
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + + R L K ++ ++ ++ AK + + ++ + ++A + ++KE E
Sbjct: 559 KLQAYEERKEALDKKAKEKARKIVDEAKREAEAIIAELREMRKNA-----DQVVKEHE-- 611
Query: 562 IAAIVEAHR------PDDDFSV----SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
++EA + P +D V ++ + G++V V S G + T++E +
Sbjct: 612 ---LIEARKRLEEATPLEDNKVLKKAAQVKARAQNLVVGDEVKVLSYGQR-GTLLEKVSN 667
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V VQ G +++++ +++ I K P LR +AG N
Sbjct: 668 TEWV-VQMGILKMKISDSDLEYIKPEKE-------PVLR---------TAGVKN------ 704
Query: 672 PRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
R K LDLRG R E+A +D AL R + +IHG+GTG +++ + L
Sbjct: 705 -RNSHVKLELDLRGERYEDAILRTEKYIDDALLSNYGR--VSIIHGVGTGALRQGIQSYL 761
Query: 728 RNHPRVAKY 736
+ H RV +
Sbjct: 762 KKHKRVKSF 770
>gi|422343730|ref|ZP_16424657.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
gi|355378146|gb|EHG25337.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
Length = 785
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 218/714 (30%), Positives = 344/714 (48%), Gaps = 81/714 (11%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R + L ++L Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITCELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + S+SGAT F+EP VE NNM +L + E IL LTAEIAK+
Sbjct: 200 EYRNYFP-GVIHDQSASGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKN 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 259 ADILADNCKILAEIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
D VPIDI++ +++ITGPNTGGK
Sbjct: 310 --------------------------------KDKVVPIDIELGSAFSILLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L
Sbjct: 398 IIEKAEPGDLILLDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQP 457
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
+NA+ EF L TLRPTYR+L G G SNA +I++ +G + I+QRA+ + E
Sbjct: 458 GIQNASVEFDLNTLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHM 513
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
H ++ +L ++++ E + E+ L + + ++ + R ++ K ++
Sbjct: 514 HF-DKVINALEQKKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEA 572
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSET 580
+ A+ + ++ + Q D E +I+++ + + A V+ + P ++ S+ +T
Sbjct: 573 NNIIRDARRTAEETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKT 631
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
S + G+ V+++SL + TV+ V D ++VQ G +R +K N I + K K
Sbjct: 632 VRPS-EIRNGDIVYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSK 687
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 698
N G+S S R Q +D+RGM V EA L I
Sbjct: 688 KDTNKV-------------HIGASISRKSVEIRPQ-----IDVRGMTVSEAESVLGKFID 729
Query: 699 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
A + S + +IHG GTG +++ + L+++ V + G V +K
Sbjct: 730 DAVFTGLSKVLLIHGKGTGALRKGLQNYLKHNKFVLSFSFADISEGGTGVTIVK 783
>gi|387819388|ref|YP_005679735.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
gi|322807432|emb|CBZ05006.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
Length = 788
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 352/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL ++L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V E
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHE 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------ 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
LR + + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 681 ---------LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V KY
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|451817877|ref|YP_007454078.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783856|gb|AGF54824.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 786
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 212/702 (30%), Positives = 367/702 (52%), Gaps = 88/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS+ L IR R+++ +S +++ + I ++ + L T R R + +K+
Sbjct: 145 ISDKASQTLYNIR----RSLKEKNSSVREKISSIVKSNSKYLQDDLYTMRGDRYVIPVKS 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT+F+EP V NN L E AE ILS L++++ +
Sbjct: 201 EYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSSKVKLN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + ++E D FA+A +A ++ + PI V+ D + +I +HPL+ G
Sbjct: 260 GEQCLSNLKVLIEFDFIFAKAKYASALNAIKPI------VTEDGTFSILSGRHPLIAG-- 311
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
D VP D+ + E ++ITGPNTGGK
Sbjct: 312 ---------------------------------DKVVPSDVYLGKEFTTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL +M +GL +PA+++ + +F + ADIGD QS+EQ+LSTFS H++ IV+
Sbjct: 339 TVTIKTVGLLHIMGLSGLLIPARDNSSIAFFTEVFADIGDEQSIEQSLSTFSSHMTNIVE 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ V +SLVL DE+G+GTDP+EG ALA SIL+ L++R + TTHY++L K
Sbjct: 399 IMKHVDDKSLVLFDELGAGTDPTEGAALAVSILETLKNRGAKLIATTHYSELKAYAIKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E L+ E
Sbjct: 459 GVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYISEENLQFEN 518
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKE 517
L + L E+ + +AR A + E +L ++ E++ + LD R A++ A+
Sbjct: 519 -------LIRELQEKSIVAKQEAREAKIIKKEAEELKKKYEEKLEKLDNTREKAYMDAR- 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ ++ ++ AK + D +++ + + ++E + A +E R +
Sbjct: 571 -REAKEIISEAKDEADEILKAMRELEKLGISGGGRHRLEEERKKLKANLE-EREKGIHNT 628
Query: 578 SETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
E + T G + + SL K+ ++ +P + V V+ G M++ VK +++
Sbjct: 629 KENEGEAITKVTLGMEALLPSLNQKV-IIISMPDNKGEVQVEAGIMKINVKLSDL----- 682
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
RK A ++R+++E + + S+ S +DLRG+ EEA ++ D
Sbjct: 683 --RKTKATKEEKVRRKREVKLNLSSVESR---------------VDLRGLDAEEACYKAD 725
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L A + + ++HG GTG++++ + ++L+ HP V Y
Sbjct: 726 KYLDDAYMANLGEVTIVHGKGTGILRKAINDMLKRHPHVKAY 767
>gi|229829396|ref|ZP_04455465.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
gi|229791827|gb|EEP27941.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
Length = 816
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 228/722 (31%), Positives = 336/722 (46%), Gaps = 114/722 (15%)
Query: 66 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 125
L+ +L A Q G +IT R R C+ ++A +K +P G+ + SSSGAT F+E
Sbjct: 171 LNRMLSSSARDYLQDG-----VITMRDGRYCLPVRAEYKNYVP-GMVHDSSSSGATLFIE 224
Query: 126 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
P V NN L E E IL L+ ++ ++ I+ DR+ E+D FA+ A
Sbjct: 225 PMSVVNLNNELRELEGKEEEEIARILRSLSDQVLENIETIQIDFDRLAELDFIFAKGQLA 284
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
M +SQ + + I+++ +HPLL
Sbjct: 285 ADMS------ASQPDFNEEGIISLKAARHPLL---------------------------- 310
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
+ VPIDI + ++V+TGPNTGGKT S+KT GL +LM +AGL++PA++
Sbjct: 311 -------DKNIVVPIDISLGQNYNLLVVTGPNTGGKTVSLKTCGLLTLMGQAGLHIPARD 363
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------SRESLVLIDEIGS 359
H +L FD + ADIGD QS+EQ+LSTFS H++ IV IL+ V ++LVL DE+ +
Sbjct: 364 HSQLAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVHILDGVDSVLANGHDALVLFDELCA 423
Query: 360 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 419
GTDP+EG ALAT+IL L R + TTHY++L ENA+ EFSLETL PTY
Sbjct: 424 GTDPAEGAALATAILDRLHRRQVRVMATTHYSELKVYALSTEGVENASCEFSLETLSPTY 483
Query: 420 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 479
R+L G G SNA I+ +G II+ AQ ++ +S ++ L+ + LE
Sbjct: 484 RLLIGIPGKSNAFAISSKLGLAADIIRDAQSRID---------EESVSFEDLLAD---LE 531
Query: 480 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAKVQI 532
++ AE I+ LD+R A L A + + +Q L AK
Sbjct: 532 NRRVAIEKTQAETRAAKASIDKTRIQLDQRLAQLNASKDKVLQSANLEAARILKEAKETA 591
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----- 587
D ++DF R A+AD +++ A+ ++ + S P
Sbjct: 592 DKTIRDFHKYGRAAAADMTR--MEQDRRALGEKLKTRQNKSRASAGMEQERRKAPVPKAK 649
Query: 588 --QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI-------------R 632
G++V V S+G ATV +P + VQ G +R RVK ++ +
Sbjct: 650 DLHIGDKVKVLSMG-VTATVHSLPDKSGHLEVQMGIIRSRVKLTDLVLVSDQSLATLNGQ 708
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
+P + R+ A R SA S N+ A P ++ L GM +EA
Sbjct: 709 QLPGTGRRRAPGSGGR----------QSASSFNKSAFISPEIK-------LLGMSGDEAI 751
Query: 693 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 750
LD L A + V+HG GTGV+++RV E L +P V Y+ S V
Sbjct: 752 CALDKYLDDAVLSHLREVRVVHGKGTGVLRQRVHEYLNGNPHVKSYDLASYGQGDAGVTV 811
Query: 751 IK 752
+K
Sbjct: 812 VK 813
>gi|422346549|ref|ZP_16427463.1| MutS2 protein [Clostridium perfringens WAL-14572]
gi|373226094|gb|EHP48421.1| MutS2 protein [Clostridium perfringens WAL-14572]
Length = 786
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S +L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFILFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|417643505|ref|ZP_12293552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri VCU121]
gi|330685726|gb|EGG97362.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU121]
Length = 782
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 222/730 (30%), Positives = 365/730 (50%), Gaps = 105/730 (14%)
Query: 39 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 94
C + D AS +L+ IR++ +R +NLD ++K A + + ++T R R
Sbjct: 142 CDAHDLYDHASYELQSIRSKISSTNQRIRQNLDRVVKSQANR----KKLSDAIVTVRNDR 197
Query: 95 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +KA ++ +GI + S+SG T ++EP VE NN RL N E E IL+ L
Sbjct: 198 NVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMNNQISRLHNDEAVERERILTEL 256
Query: 155 TAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 213
T+++A E + L + ++ +D A+A +A+ + G P ++ V ++
Sbjct: 257 TSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTKPTFHNERTVYLPNAY------ 309
Query: 214 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 273
HPLL + +N+ D+E V+I
Sbjct: 310 HPLL------DHNTVVANTIEFVDDIE-----------------------------TVII 334
Query: 274 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 333
TGPNTGGKT ++KTLGL +M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS
Sbjct: 335 TGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFS 394
Query: 334 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA SIL ++R+ L + TTHY +L
Sbjct: 395 SHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALVMATTHYPEL 454
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
NA+ EF +ETL PTY++L G G SNA +I+K +G II +A+ ++
Sbjct: 455 KAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIG 514
Query: 454 RLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
E +S S + E+R +L+ + A + H E+ Y++ ++ K L A
Sbjct: 515 TDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHDELEKQYQQYQNYEKSLMDEA- 573
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 571
K K Q+V+ A + D ++++ +LRD + +KE E I + +
Sbjct: 574 --KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD----VKEHE----LIDKKKQL 618
Query: 572 DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
DD + + ++ G++V V S G K V+E+ GD++ V VQ G +++++
Sbjct: 619 DDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEVLELVGDEEAV-VQMGILKMKL 676
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
PI + +++K++E +S + + R QT K LDLRG
Sbjct: 677 ------PIED---------LEKMKKKKE--------TSTKMVTRANR-QTVKTELDLRGY 712
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM-- 742
R E+A +LD L A + +++IHG GTG +++ V + L+ H V + P
Sbjct: 713 RYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGVQQHLKRHKSVKTFRGGMPSEG 772
Query: 743 NYGCTVAYIK 752
+G TVA +K
Sbjct: 773 GFGVTVASLK 782
>gi|389575981|ref|ZP_10166009.1| MutS2 family protein [Eubacterium cellulosolvens 6]
gi|389311466|gb|EIM56399.1| MutS2 family protein [Eubacterium cellulosolvens 6]
Length = 791
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 223/730 (30%), Positives = 347/730 (47%), Gaps = 84/730 (11%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 74
P+ +LL N LT L +I CI + I D AS L IR + +N + + S L+ +
Sbjct: 120 PIFDLL---NPLTPLSTEIRRCILSEDEIA-DDASSTLRQIRRQISQNGDKIHSQLQSMI 175
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
+ + +IT R R CV +KA ++ +P G+ + SS+GAT F+EP V+ NN
Sbjct: 176 NGPLR-NALQDAVITMRDGRYCVPVKAENRSAVP-GMIHDQSSTGATLFIEPMAIVKLNN 233
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L E E IL+ L+A A+ +I Y + + E+D FAR G A M P+
Sbjct: 234 DIRELELKEQKEIEVILATLSASAAEHVEDISYDLQNLAELDFIFARGGLALDMKATEPV 293
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
+++ IN+ +HPL+ +
Sbjct: 294 FNTEGR------INLRKARHPLIDKHRV-------------------------------- 315
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPID+ + ++++TGPNTGGKT S+KT+GL +LM +AGL++P + L F
Sbjct: 316 ---VPIDVHLGDSFDLLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPTLDRSELSVFTE 372
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 374
+ ADIGD QS+EQ+LSTFS H++ IV +E R SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 373 VYADIGDEQSIEQSLSTFSSHMTNIVSFIEKADRNSLVLFDELGAGTDPTEGAALAIAIL 432
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
+L + + TTHY++L + ENA+ EF++ETL+PTYR+L G G SNA I
Sbjct: 433 SHLHRQGIRTMATTHYSELKIFALSTDKVENASCEFNIETLQPTYRLLIGVPGKSNAFAI 492
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
+ +G II A+ + Q ++ SL + R E++ R ++
Sbjct: 493 SSKLGLPDYIIDDAKGQI-----SEQDESFEDVLSSLEQNRIAQENEQRAIEYRKQQLEK 547
Query: 495 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 554
L +E+++ + L+ + + K +Q + L AK D V++DF R +NS
Sbjct: 548 LEKELKNRERTLETQKNKIIEKANEQARTVLQDAKTYADQVMKDF----RKFGKAGVNSA 603
Query: 555 -IKESESAIAAIVEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPG 610
++ + + ++ +E P Q G V V SL K TV P
Sbjct: 604 EMERKRNELRKEMDKTASKAQVKPAERTGKKVRPQDLQLGTAVKVLSLNLK-GTVSSKPD 662
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPI--PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ V+ G +R +V +++ I P++ K ++ GS
Sbjct: 663 SRGNLFVRMGIIRSKVNISDLEIIDEPDTITKTTSH----------------IGSGKIRM 706
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
S V + N L G V+EA +LD L A S + VIHG GTG +++ V +
Sbjct: 707 SKAMNVSSEIN---LLGKTVDEAVAELDKYLDDAVLAHLSSVRVIHGKGTGALRKGVHQY 763
Query: 727 LRNHPRVAKY 736
L+ R+A +
Sbjct: 764 LKTQRRIADF 773
>gi|414160430|ref|ZP_11416698.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878328|gb|EKS26213.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
Length = 782
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 229/755 (30%), Positives = 370/755 (49%), Gaps = 105/755 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
Y L E + L++L ++I C + D AS +L+ IR+ +R +NLD
Sbjct: 118 YPILDERMTQLPILSDLYQEIKQ--KCDAYDLFDDASYELQSIRSRIHSTSQRIKQNLDR 175
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++K + Q + +IT R R + +KA ++ +GI + SSSG T ++EP
Sbjct: 176 VVKSQSNQ----KKLSDLIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSA 230
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQW 187
VE NN RL N E AE IL+ LT E+A E + + + V+ +ID A+A +
Sbjct: 231 VVEMNNKISRLRNDEKAEVERILTELTLEVA-GEADACLIAESVMGQIDFLTAKARYGSS 289
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + + V + HPLL +P K+ V N+ V
Sbjct: 290 IKGTKPEFTEERKVYLPKAF------HPLL---------------DP-KTVVANTIEFVD 327
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
+ + V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 328 GI-------------------QTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGS 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L FD + DIGD QS+EQ+LSTFS H+ IV+IL+ S++L DE+G+GTDPSEG
Sbjct: 369 KLGVFDNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSVILFDELGAGTDPSEGA 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL ++ R L + TTHY +L NA+ EF + TL PTY++L G G
Sbjct: 429 ALAMSILDNVQKRGALVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA I+ +G + KII+ A+ ++ + + + + SL + +++++Q
Sbjct: 489 RSNAFEISSKLGLNGKIIRDAKAMI-----GQDEQEINNMIASLEKNTKRVDNQRIELEQ 543
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E DL+R++ + L + + Q + A + + ++ D QLR
Sbjct: 544 LLREAQDLHRQLSQKYDQYQNYEKQLMDEAKTKANQRVKVATKEAEEIISDL-RQLR--- 599
Query: 548 ADEINSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDK 601
DE N+ +KE E ++E + D+ + ++ + ++ G++V V + G K
Sbjct: 600 -DEKNADVKEHE-----LIEKRKHLDEQYEATDLKQNVKKKKWDEIKAGDEVKVLTYGQK 653
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
V+E+ DD+ +VQ G +++++ PI + ++K +K QE Q+
Sbjct: 654 -GEVLEIL-DDEEAVVQMGIIKMKL------PIADLEKK---------QKTQEP-QTKMV 695
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
SN K LDLRG R +EA LD L A + +++IHG GTG +
Sbjct: 696 SRSNRSP--------VKMELDLRGYRYDEAVTALDQYLDQAMLSNYENVYIIHGKGTGAL 747
Query: 720 KERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
++ V + L+ H +A Y +P +G TVA +K
Sbjct: 748 QKAVQQHLKRHKNIASYRTGTPSEGGFGVTVATLK 782
>gi|170755146|ref|YP_001782757.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B1 str. Okra]
gi|429246442|ref|ZP_19209762.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
gi|229486369|sp|B1IMK5.1|MUTS2_CLOBK RecName: Full=MutS2 protein
gi|169120358|gb|ACA44194.1| MutS2 family protein [Clostridium botulinum B1 str. Okra]
gi|428756532|gb|EKX79084.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
Length = 788
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 352/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALK 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL ++L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------ 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
LR + + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 681 ---------LRAAKGSNSNSSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V KY
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|168211671|ref|ZP_02637296.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
gi|170710370|gb|EDT22552.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
Length = 786
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNYIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLIDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|148381072|ref|YP_001255613.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 3502]
gi|148290556|emb|CAL84684.1| putative DNA mismatch repair protein [Clostridium botulinum A str.
ATCC 3502]
Length = 788
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 352/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYVLR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL Q+L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------ 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
LR + + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 681 ---------LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V KY
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|418620520|ref|ZP_13183324.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
gi|374822650|gb|EHR86670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
Length = 783
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 231/767 (30%), Positives = 364/767 (47%), Gaps = 107/767 (13%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 58
+LE++ G I +Y L E + LT+L ++I C + D AS +L+ IR++
Sbjct: 109 LLEEDEGVI--KYPILNERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKIS 164
Query: 59 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 116
+R +NLD ++K A Q + +IT R R + +KA ++ GI + S
Sbjct: 165 STTQRIRQNLDRIVKSQANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQS 219
Query: 117 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 176
+SG T ++EP VE NN RL N E E IL+ LT +A ++ + +ID
Sbjct: 220 ASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQID 279
Query: 177 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 236
A+A +A+ + G P + V ++ HPLL
Sbjct: 280 FLTAKARYARSIKGTKPTFYKERTVYLPNAY------HPLL------------------- 314
Query: 237 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
N + V + + I D V+ITGPNTGGKT ++KTLGL +M++
Sbjct: 315 ----NKDTVVANTIEFIDDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQ 358
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
+GL +P + +L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE
Sbjct: 359 SGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDE 418
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
+G+GTDPSEG ALA SIL ++RD L + TTHY +L NA+ EF + TL
Sbjct: 419 LGAGTDPSEGAALAMSILDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLS 478
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 476
PTY++L G G SNA +I+K +G II +A+ ++ E S++E
Sbjct: 479 PTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE--- 526
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
LE ++ E+ L RE DL+R+ K E + + + + A +I +
Sbjct: 527 SLEKNSKRVDEQRIELEKLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSAT 586
Query: 537 QDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF----- 589
++ ++ L+D D+ + +KE E I + +D + + ++
Sbjct: 587 KEADDILKDLREMRDKKGADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHA 642
Query: 590 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 649
G++V V S G K V+E+ G+++ V VQ G +++++ PI + ++ P
Sbjct: 643 GDEVKVLSYGQK-GEVLELSGENEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTK 694
Query: 650 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSV 707
++ R QT K LDLRG R EEA LD I A +
Sbjct: 695 MVTRQSR------------------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQ 736
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++IHG GTG +++ V L+ H V + P +G TVA +K
Sbjct: 737 VYIIHGKGTGALQKAVQNHLKKHKSVQSFRGGMPSEGGFGVTVAELK 783
>gi|345861074|ref|ZP_08813351.1| mutS2 family protein [Desulfosporosinus sp. OT]
gi|344325837|gb|EGW37338.1| mutS2 family protein [Desulfosporosinus sp. OT]
Length = 787
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 216/737 (29%), Positives = 358/737 (48%), Gaps = 91/737 (12%)
Query: 28 ELEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
+LE++I CI D K + D AS +L +R + R E+L++ L+ A Q
Sbjct: 130 DLEDEISRCIAEDGK---VADSASPELADLRRALNRLQNRIRESLEATLRNSAYQKM--- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ P+IT+R R + IK ++ P GI + S+SGAT F+EP V N +
Sbjct: 184 -LQDPIITQRSDRYVLPIKQEYRTAFP-GIVHDQSASGATLFIEPMPVVHLGNELREVIL 241
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +L+++I + L + + ++DL A+A + M+ P L +
Sbjct: 242 KEQREVMRILQMLSSQIEARVDAVAELHEALAKLDLVVAKAQLSVAMNAGAPELVKGQQM 301
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+LG VP+
Sbjct: 302 KLVQA------RHPLILGKV------------------------------------VPLS 319
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ + +V+TGPNTGGKT ++K +GL + M+++GL++PA+N R+ F I ADIGD
Sbjct: 320 LELGIDFDTLVVTGPNTGGKTVALKVVGLMAAMTQSGLHIPAENDSRMGVFTQIFADIGD 379
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFSGH+ IV+I++ SLVL+DE+G+GTDP+EG ALA IL L +R
Sbjct: 380 EQSVEQSLSTFSGHMKNIVEIIDRSDERSLVLLDEVGAGTDPTEGAALAMGILAELHERG 439
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY L + R +NA+ EF ETLRPTYR+L G G SNA IA +G
Sbjct: 440 CRTVSTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLS 499
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+++++A V ER+ ++L ++L E R++E + + + + + +E+
Sbjct: 500 EQVLEKANTFV----TEREMQ-VADLIENLGETHREIELEKQKVKTGRQAVERQSKALEE 554
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
++ LD L + + + + A+ + D ++++ + L+ + + + I+++
Sbjct: 555 KSILLDEEYELLLSMAKDEASELVRQARREADAIIEELKAALKKENKQQQD--IEKARQG 612
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
I + R D V + Q G+ V + L K V+++P + VLVQ
Sbjct: 613 FHRI--SARLDKGRKVQRPGSGLVADQIKLGQTVQMTKLRQK-GQVIKLPNANGEVLVQA 669
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G M+V V P L+ E+++ S + + + + ++
Sbjct: 670 GIMKVMV------------------PLVELKLTNEEKKIRPKYSRDVNIGF-QKAEEIRS 710
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
+DLRGM VEE + LD L A +++VIHG GTG ++ + + LR HP V +
Sbjct: 711 EIDLRGMLVEEGTEVLDKYLDDAVLSGVGLIYVIHGKGTGAMRAGIQDFLRGHPHVRSFR 770
Query: 738 --QESPMNYGCTVAYIK 752
+ + G TV +K
Sbjct: 771 LGEYGEGDSGVTVVELK 787
>gi|27467755|ref|NP_764392.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis ATCC 12228]
gi|293366874|ref|ZP_06613550.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656654|ref|ZP_12306337.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|417660105|ref|ZP_12309696.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|417909781|ref|ZP_12553514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|418603410|ref|ZP_13166795.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|418606840|ref|ZP_13170105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|418609778|ref|ZP_13172912.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|418628985|ref|ZP_13191501.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|418663768|ref|ZP_13225276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|419772619|ref|ZP_14298650.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|420202124|ref|ZP_14707719.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|420206519|ref|ZP_14712029.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|420210956|ref|ZP_14716345.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|420219527|ref|ZP_14724543.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|420222048|ref|ZP_14726973.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|420224910|ref|ZP_14729748.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|420229273|ref|ZP_14733979.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|420231637|ref|ZP_14736282.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
gi|38604826|sp|Q8CPL6.1|MUTS2_STAES RecName: Full=MutS2 protein
gi|27315299|gb|AAO04434.1|AE016746_224 MutS-like protein [Staphylococcus epidermidis ATCC 12228]
gi|291319175|gb|EFE59545.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329734429|gb|EGG70742.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|329736315|gb|EGG72587.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|341652390|gb|EGS76178.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|374406114|gb|EHQ77017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|374406846|gb|EHQ77724.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|374407579|gb|EHQ78432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|374411187|gb|EHQ81905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|374834979|gb|EHR98610.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|383359246|gb|EID36676.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|394270097|gb|EJE14620.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|394278358|gb|EJE22675.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|394282893|gb|EJE27075.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|394288952|gb|EJE32849.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|394290079|gb|EJE33949.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|394294313|gb|EJE37999.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|394299039|gb|EJE42590.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|394302179|gb|EJE45627.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
Length = 782
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 229/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P + + ++ HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|410727381|ref|ZP_11365601.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
gi|410598971|gb|EKQ53532.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
Length = 786
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 214/710 (30%), Positives = 358/710 (50%), Gaps = 104/710 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS+ L IR R+++ +S +++ I ++ + L T R R + +K+
Sbjct: 145 ISDKASQTLYNIR----RSLKEKNSSVREKIGSIVRSNSKYLQDDLYTMRGDRYVIPVKS 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT+F+EP V NN L E AE ILS L+ ++ +
Sbjct: 201 EYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSLKVKNN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
E + ++E D FA+ +A ++ V PI V D +I +HPL+
Sbjct: 260 SDECLSNLKVLVEFDFIFAKGRYASSLNAVKPI------VRDDGVFSILSGRHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D VP D+ + E + ++ITGPNTGGK
Sbjct: 310 -----------EP--------------------DKVVPSDVYLGEEFQTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL +M +GL +PAK++ + F I ADIGD QS+EQ+LSTFS H++ IV+
Sbjct: 339 TVTIKTVGLLHIMGLSGLLIPAKDNSSIALFTEIFADIGDEQSIEQSLSTFSSHMTNIVN 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++L K
Sbjct: 399 IMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF +ETL+PTYR+L G G SNA I+K +G +I+RA+ E + E Q
Sbjct: 459 GVENASVEFDIETLKPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAK---EYMSEENLQ 515
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQ 519
L + L E+ + +AR A L + +L R+ E++ + L+ R A++ A+ +
Sbjct: 516 FEN--LIRDLQEKSIIAKKEAREAKMLRDQAEELKRKYEEKLEKLEQTREKAYMDAR--R 571
Query: 520 QVQQELNFAKVQIDTVVQDFEN-----------QLRDASADEINSLIKESESAIAAIVEA 568
+ ++ + AK + D +++ Q + ++ ++E E I + E
Sbjct: 572 EAKEIIANAKDEADDILKAMRELEKLGIGSGGRQRLEEERKKLKESLEEKEKGIHKMKEN 631
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
+ + +F P ++V + S+ P + V V+ G M++ VK
Sbjct: 632 E--GEVITKVTLGMEAFLPSLNQKVIITSM----------PDNKGEVQVEAGIMKINVKL 679
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
++R ++ + ++R+++E + + S+ V+T +DLRGM
Sbjct: 680 KDLRKTQETREE-------KVRRKREVKLNLSS------------VET---RVDLRGMDA 717
Query: 689 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EEA ++ D L A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 718 EEACYKADKYLDDAYRANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|402303647|ref|ZP_10822737.1| MutS2 family protein [Selenomonas sp. FOBRC9]
gi|400378042|gb|EJP30906.1| MutS2 family protein [Selenomonas sp. FOBRC9]
Length = 785
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 222/722 (30%), Positives = 346/722 (47%), Gaps = 95/722 (13%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIK 100
D AS +L + E + R E L ++L A Q FQ + ++T R R + +K
Sbjct: 144 DDASPELRRVTREMLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVK 198
Query: 101 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 160
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA+
Sbjct: 199 QEYRAQFP-GVIHDRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIAR 257
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
+ + + E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 258 AADILSENCTILAELDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL--- 308
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P D VPIDI++ V++ITGPNTGG
Sbjct: 309 -------------P-------------------KDRVVPIDIELGRGFSVLLITGPNTGG 336
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT SMKTLG+ +LM+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 337 KTVSMKTLGILALMAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIV 396
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
IL+ LVL+DE+G+GTDP EG ALA SI+++L R + TTHYA L
Sbjct: 397 RILQKAESNDLVLLDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGR 456
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
NA+ EF TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ +
Sbjct: 457 QGVMNASVEFDTATLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------E 510
Query: 461 QHRKSELYQSLMEERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
H + E + +E+ +++ +++ RT A + + + R D+ R+ H +
Sbjct: 511 DHVRFETVVNELEKEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRKLLHKARE 570
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
E + +E A+ + ++ + Q D E I+E+ + EA+ P S
Sbjct: 571 EANGIVRE---ARRSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPS 624
Query: 577 VSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
+ + G+ VH+ L + TV+ V G + T VQ G +R VK + +
Sbjct: 625 AVKVGQKIRAGEIEPGDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKTDECTFV 681
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
K+K+ + G G +++A+ RV + +D+RGM V EA
Sbjct: 682 SRKKKKHRTE------------KVGFTGGISQKAA---RVHS---QIDVRGMTVSEAELT 723
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAY 750
L I A + S + +IHG GTG ++ + + L+ HP V + S G +VA
Sbjct: 724 LGKFIDDAVFAGLSKILIIHGKGTGALRIGIQDYLKRHPSVLSVAFADISEGGSGASVAE 783
Query: 751 IK 752
+K
Sbjct: 784 LK 785
>gi|374992901|ref|YP_004968400.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
gi|357211267|gb|AET65885.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
Length = 787
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 220/753 (29%), Positives = 360/753 (47%), Gaps = 93/753 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAE----RKRNMENL 66
YS L +++ LE++I CI D + D AS +L +R + R E+L
Sbjct: 115 YSGLWDIVLPIESQKSLEDEISRCISEDGN---VADNASPELAELRRSINRLQNRIRESL 171
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
+ L+ Q + P+IT+R R + IK ++ P GI + S+SGAT F+EP
Sbjct: 172 EGTLRNPVYQKM----LQDPIITQRSDRYVIPIKQEYRGSFP-GIVHDQSASGATLFIEP 226
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
V+ N + E E IL +L+A+I EI L + + ++DL A+A +
Sbjct: 227 MPVVQLGNELREVILKEHREVQRILQMLSAQIEGRADEIADLHEALAQLDLVIAKAHLSL 286
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
M+ P L + + + +HPL
Sbjct: 287 DMNAGSPELVTGQQLKLVQA------RHPL------------------------------ 310
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
IS VP+ +++ + +VITGPNTGGKT ++K +GL + M++ GL +PA++
Sbjct: 311 ------ISGRVVPLSVELGIDFDTLVITGPNTGGKTVALKAVGLMAAMNQCGLQIPAESE 364
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ F + ADIGD QS+EQ+LSTFSGH+ IVDI+ SLVL+DE+G+GTDP+EG
Sbjct: 365 SKMGVFTQLFADIGDEQSVEQSLSTFSGHMKNIVDIINRADERSLVLLDEVGAGTDPTEG 424
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA IL L +R + TTHY L + R +NA+ EF ETLRPTYR+L G
Sbjct: 425 AALAMGILAELHERGCRTISTTHYGALKTFAYETPRVKNASVEFDTETLRPTYRLLIGIP 484
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA IA +G ++ +A V ER+ ++L ++L E RR++E + A
Sbjct: 485 GKSNAFTIAGRLGLSEGVLAKANTFV----TEREMQ-VADLIENLGETRREIEIEKLKAE 539
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+ + + +E+++ LD L A + + + AK + + ++++ ++ L+
Sbjct: 540 TGRQAVEKQSKALEEKSNRLDEEVEILLALARDEASELVREAKREAEALIEELKSALKKE 599
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--FGEQVHVKSLGDKLAT 604
+ + + I+++ I + + D + T Q G+ V++ + K
Sbjct: 600 NKQQQD--IEKARQGFRKI--SAKLDQGRQIKRTGGELTADQIMLGQTVYMTKVKQK-GQ 654
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
VV++P + V VQ G M+V V P L+ QE+++ +A
Sbjct: 655 VVKLPNANGEVQVQAGIMKVMV------------------PLTELKLAQEEKK--AAPKR 694
Query: 665 NEEASYGPR-VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
E G R + ++ +DLRGM V E + LD + A +++VIHG GTG ++
Sbjct: 695 AREMGMGFRKAEEIRSEIDLRGMLVTEGTEALDKYMDDAVLGGIGMIYVIHGKGTGAMRA 754
Query: 722 RVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ + L+ HP V + + + G TV +K
Sbjct: 755 GIHDFLKGHPHVRSFRLGEYGEGDSGVTVVDLK 787
>gi|421860087|ref|ZP_16292245.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
gi|410830291|dbj|GAC42682.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
Length = 785
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 239/758 (31%), Positives = 382/758 (50%), Gaps = 108/758 (14%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
PLL+ L + + +LEE I CID + I LD+AS +L IR E + R E L+++
Sbjct: 116 PLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASFELAAIRRELRTGETRIREKLEAM 174
Query: 70 LKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
++ AA++ Q + LIT R R + +K ++ GI + S SGAT F+EP+
Sbjct: 175 IRTSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRSHY-SGIVHDQSGSGATLFIEPEA 228
Query: 129 AVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
V NN L +++ EE I LS LT + ++Y V +D FA+A A
Sbjct: 229 IVAMNN---HLRETKLREEREIERILSRLTDRVGLIADVLEYDTGAVETLDFMFAKARLA 285
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
+ M P ++ + + + HPL+ P
Sbjct: 286 REMKASLPRMNDRGFLKLRQAC------HPLI----------------P----------- 312
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
+D VPI +++ +++TGPNTGGKT ++KT+GL SLM+ +GL++PA++
Sbjct: 313 --------ADQVVPIHVELGNSYTSILVTGPNTGGKTVTLKTIGLLSLMAMSGLFIPAED 364
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
++ FD I ADIGD QS+EQ+LSTFS H++ I+ ILE ++ +SLVL+DE+G+GTDP+E
Sbjct: 365 GSQMCVFDTIYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAE 424
Query: 366 GVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
G ALA +IL+++ R+G +V TTHY++L + NA+ EF ++TLRPTYR+L G
Sbjct: 425 GSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLIG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA IA+ +G + II A+ V + R + SL + R K E++ T
Sbjct: 484 VPGRSNAFAIAERLGLPKSIIDHARGEV-----TEEDMRVETMIASLEDNRLKAEAERET 538
Query: 485 AASLHAEI----MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 540
A+ L ++ L RE+E + D ++R A + K V + A+ Q ++ D
Sbjct: 539 ASKLRMDLEAMQQKLTRELEKQEADREKRQAQAEEKARAIVDK----ARRQAQEIIADL- 593
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSL 598
QL + ++ E+ + + P+ + + + G+ V V SL
Sbjct: 594 RQLAMEGVEVKEHMLTEARKRL----DEAAPEAKLAAKPKRQAKPARRIEAGDDVRVYSL 649
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
K +VVE G++ +VQ G M+++V +++ + S K+AA QS
Sbjct: 650 NQK-GSVVEFVGEE--AVVQLGMMKMKVPLDDLELL--SSVKSAAKAV----------QS 694
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
G +N + + G T ++ LDLRG +EEA ++D L A + +++IHG GT
Sbjct: 695 G----TNVKRTRG---DTIRSELDLRGANLEEALMEVDRFLDEALIGNLGQVYIIHGKGT 747
Query: 717 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
G+++ + E LR H V + G TVA +K
Sbjct: 748 GILRSGIQEFLRKHKHVKSFRLGDFGEGGTGVTVAELK 785
>gi|420155006|ref|ZP_14661877.1| MutS2 family protein [Clostridium sp. MSTE9]
gi|394759848|gb|EJF42511.1| MutS2 family protein [Clostridium sp. MSTE9]
Length = 802
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 227/684 (33%), Positives = 343/684 (50%), Gaps = 90/684 (13%)
Query: 64 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 123
E LD +++ A Q + + P++T R R V +KA + +P G+ + SSSGAT F
Sbjct: 180 EQLDKMIRSAAYQKY----LQDPIVTMRGGRYVVPVKAECRGEIP-GLVHDTSSSGATVF 234
Query: 124 MEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
+EP G VE NN E+R L + E AE IL+ L+AE I + +DL FA+
Sbjct: 235 VEPMGVVEANN-EIRVLQSRESAEIERILAELSAEAGGFADLIIESYHAAVGLDLIFAKG 293
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
A M P ++ + + + +HPL+ +P +
Sbjct: 294 QLAYKMKASMPKVNDTGRILLNQA------RHPLI---------------DPKQV----- 327
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
VP++I++ +VITGPNTGGKT ++KTLGL +LM+ GL LP
Sbjct: 328 ---------------VPMNIELGTTFDTLVITGPNTGGKTVTLKTLGLLTLMAMCGLMLP 372
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
++ + F +LADIGD QS+EQ+LSTFS H++ I+ I+E SL+L+DE+G+GTD
Sbjct: 373 VGDNSEISVFHQVLADIGDEQSIEQSLSTFSAHMTNIIQIIEQADERSLILLDELGAGTD 432
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P EG ALA +IL+ LR+R TTHYA+L + EN + EF + TLRPTYR+L
Sbjct: 433 PVEGAALAMAILEALRERHARVAATTHYAELKAYALQTAGVENGSCEFDVATLRPTYRLL 492
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 482
G G SNA I+ +G +++I+ RA++LV + R ++ Q+L + R+KLE++
Sbjct: 493 IGVPGRSNAFAISSRLGLNQEIVDRARELV-----SGEDRRFEDVVQNLEQSRQKLEAER 547
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ----QELNFAKVQIDTVVQD 538
R A +AE R I +EA++ R AKE +Q + Q + + Q D ++++
Sbjct: 548 RQAQEQNAE----ARRISEEAREYRERLEREAAKEIEQARERAAQLVARTRAQADALLEE 603
Query: 539 FENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHV 595
E R + S+ E + + A + + D S E T G+ V +
Sbjct: 604 LEEMKRQGA----KSMTAEQRARMKAGMRDMESASDPVSRKEPETYVLPRPLKAGDDVLI 659
Query: 596 KSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
+ DK TVVE P DD VLVQ G ++ RV N+R L ++ +
Sbjct: 660 FDI-DKEGTVVETPAPDDKKVLVQAGIIKTRVPVENLR---------------LLEQKTQ 703
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R++ +G+ N V T +D+RG EA +D A+ A L +IH
Sbjct: 704 NRKARRSGTRNVPKRSDAPVMT---EVDVRGEDSIEAVMSVDRAIDSALLSGIHQLTIIH 760
Query: 713 GMGTGVVKERVLEILRNHPRVAKY 736
G GTGV++ V + LR HP V Y
Sbjct: 761 GKGTGVLRTAVQQHLRRHPSVRTY 784
>gi|429728985|ref|ZP_19263676.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
gi|429146586|gb|EKX89637.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
Length = 809
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 214/721 (29%), Positives = 348/721 (48%), Gaps = 91/721 (12%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L +IR + +N+ S L + + + +I+ R R + +KA ++
Sbjct: 166 DNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQDAIISMRGDRFVIPVKAEYRS 225
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
++ GI + S SGAT F+EP VE NN +L E E IL+ L+ + + RE+
Sbjct: 226 VIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETEEIERILAELSGMVGEVAREL 284
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +D AFA+ + M V PIL+ D S I +HPL+
Sbjct: 285 ISNQEILGRLDFAFAKGKLSIAMKAVDPILNR------DKSFRIVKGRHPLI------DK 332
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+N+ L D + ++ITGPNTGGKT ++
Sbjct: 333 KTVVANTVYLGKDFSS-----------------------------LLITGPNTGGKTVTI 363
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
K +GL SLM++ GL++PA + FD + ADIGD+QS+EQNLSTFS H++ IV+I++
Sbjct: 364 KMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSIEQNLSTFSSHMTSIVNIVDR 423
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L + TTHY++L EN
Sbjct: 424 VTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCIATTHYSELKKYALAKKGVEN 483
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
AA EF +ETL PTYR+L G G SNA I++ +G + +I A+ ++ E +
Sbjct: 484 AAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVILNAKFYMDNDDIELE----- 538
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
++ QS+ + R K+E + A ++ +EI + E ED+ K L+ A + + +
Sbjct: 539 DVLQSVEKNRLKIEEELSRAEAMRSEIENRKNEYEDKIKKLEESKAKVMENARSEAFSIV 598
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
AK + + +++ R++++ + + I+E I + +P + S
Sbjct: 599 RQAKEETEVLIKKLRKLERESASKDKDRRIEEIRREIGQTMGGLQP--------SLESMV 650
Query: 586 TPQF----------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
P+F G++V++ SL + TV+ + +VQ G M++ + +++ I
Sbjct: 651 VPKFASKEIKSLKAGQEVNIVSLRQE-GTVISADDNKKEAVVQVGIMKMTLPYKSLKII- 708
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N R ++ +SG+ DLRGM +EEA +
Sbjct: 709 ---EKKDKNTVTRTTRKVIRSKSGNVKRE-----------------DLRGMNLEEAIVAV 748
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYI 751
D L AC + VIHG+GTGV+K + E L+ HP V + Q G T+ +
Sbjct: 749 DKYLDDACMAGHDEVTVIHGIGTGVLKSGIGEHLKRHPHVKSQRKGQYGEGGIGVTIVEV 808
Query: 752 K 752
K
Sbjct: 809 K 809
>gi|420194100|ref|ZP_14699929.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
gi|394266798|gb|EJE11423.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
Length = 782
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 229/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P + + ++ HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRCLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K Q+V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|227510203|ref|ZP_03940252.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190408|gb|EEI70475.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 788
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 223/725 (30%), Positives = 347/725 (47%), Gaps = 99/725 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
ILD AS +L IR R ++ S + K + G K L IT R R + I
Sbjct: 147 ILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKYLTESIITMREDRFVLPI 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
+A +K GI + S+SG T ++EP VE NN R +E AEE IL+ LT I
Sbjct: 202 RADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEERRILAELTDLIR 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
E+ M+ V ++D A+A FA + V P +S ++ +N+ +HPL+
Sbjct: 261 PYRSELLNNMNLVGQLDFVNAKAKFAHQIGAVQP------EISRENVVNLRRARHPLI-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D V DI++ R ++ITGPNTG
Sbjct: 313 ---------------------------------ARDKAVANDIQIGDGYRTIIITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I
Sbjct: 340 GKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 400 ISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGCELIATTHYPELKAYAYN 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF +ETLRPTYR L G G SNALNIA +G ++II++A+ + +
Sbjct: 460 RSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSKEIIEKARAFTDSENQDI 519
Query: 460 QQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
Q+ +E +L+ Q + LH ++ + + + +++ KD HL +
Sbjct: 520 NNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQNQ-KD------HLLEQA 572
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAI----VEAHRP 571
+Q Q + AK+ D ++ D + + S IKE+E A A+ V +
Sbjct: 573 REQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENELIDAKGALNRLEVTPNLK 628
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+ E F P G++V VKS G + + + + VQ G +++++ +N++
Sbjct: 629 KNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK--NGAWEVQLGILKMQIDENDL 684
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
K A + + Q + ++ S+G S P +LDLRG R EEA
Sbjct: 685 -------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-------TLDLRGHRYEEA 723
Query: 692 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCT 747
++LD I A + +IHG GTG +++ V E LR++ R+ + +P G T
Sbjct: 724 MYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNARIKSFGYSAPNAGGDGST 783
Query: 748 VAYIK 752
V K
Sbjct: 784 VVKFK 788
>gi|251810592|ref|ZP_04825065.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876408|ref|ZP_06285275.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|417913383|ref|ZP_12557050.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|418624906|ref|ZP_13187566.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|420172837|ref|ZP_14679335.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|420198524|ref|ZP_14704232.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|420226953|ref|ZP_14731726.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|421607338|ref|ZP_16048584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
gi|251805752|gb|EES58409.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295433|gb|EFA87960.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|341655665|gb|EGS79389.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|374826171|gb|EHR90079.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|394241514|gb|EJD86928.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|394264219|gb|EJE08915.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|394297454|gb|EJE41051.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|406657130|gb|EKC83523.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
Length = 782
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 230/757 (30%), Positives = 367/757 (48%), Gaps = 107/757 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT + +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E +S + S + ++R +L+ R
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVRE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A H + Y++ ++ K L A K K ++V+ A + D ++++ N LR
Sbjct: 548 AQETHDALSKQYQQYQNYEKSLMEEA---KEKANKRVKS----ATKEADEILKELRN-LR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
D E +KE E I + + DD + ++ G++V V S G
Sbjct: 600 DHKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K V+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 652 QK-GEVLELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--- 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 ---------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTG 745
Query: 718 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 746 ALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|315649009|ref|ZP_07902103.1| MutS2 family protein [Paenibacillus vortex V453]
gi|315275690|gb|EFU39044.1| MutS2 family protein [Paenibacillus vortex V453]
Length = 789
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 232/763 (30%), Positives = 377/763 (49%), Gaps = 115/763 (15%)
Query: 17 LELLKNCNFLTE----LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDS 68
+E+L N + L LE+ I CID +LD AS +L IR E + R E L+S
Sbjct: 115 IEILFNLSDLISEQKPLEDAIRLCID-DAAEVLDSASAELSQIRRELRGGEVRIREKLES 173
Query: 69 LLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+++ + A++ Q LIT R R + +KA ++ GI + S SGAT F+EP+
Sbjct: 174 MIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSHF-GGIVHDQSGSGATLFIEPE 227
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN E E IL LTA++ + + +D + ++D FA+A A
Sbjct: 228 SIVAMNNKLRETRMREEREIEVILQKLTAQVGEQADLLSMDLDLIGQLDFIFAKARLAHV 287
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
M P ++ + ++ +HPL+ P+
Sbjct: 288 MRASLPRMNDRGYIKLRKG------RHPLI----------------PM------------ 313
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
D VP+D+++ +++TGPNTGGKT ++KT+GL +LM+ +GL++PA+
Sbjct: 314 -------DQVVPLDVELGNTYTSIIVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEEGS 366
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++++SLVL+DE+G+GTDP+EG
Sbjct: 367 QMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILGQMTQKSLVLLDEVGAGTDPAEGS 426
Query: 368 ALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL+++ R+G ++ TTHY++L + NA+ EF + TL PTYR+L G
Sbjct: 427 ALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVINASMEFDINTLSPTYRLLVGVP 485
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA IA+ +G I++ A+ V + + R + SL E R E + A
Sbjct: 486 GRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVEHMIASLEENRHTAEMEREKAE 540
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+ E+ +L E E + L+ + L K + +Q ++ A+ + + ++ D LR
Sbjct: 541 QVRKEMEELRVRHEHELQKLEEQKDKLVDKARMEARQIVDKARSEAEEIISD----LRKI 596
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS----------SFTPQFGEQVHVK 596
+ +E S +KE + ++ A + DD + + S P G++V V
Sbjct: 597 ALEEGAS-VKEHK-----LIAARKRLDDAEPQQGKKTGGQRSAKQQRSIEP--GDEVRVF 648
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
SL K VVE+ G + V VQ G M+++V +++ + N P +Q +
Sbjct: 649 SLNQK-GHVVEMTGSKEAV-VQLGIMKMKVALDDLELLSN----------PAANAKQAPK 696
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 714
Q + +A+ +N LDLRG +EEA ++D I A + + +IHG
Sbjct: 697 QHATILKRTRDANI-------RNELDLRGANLEEALIEVDRFIDEAFLGNLGQISIIHGK 749
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCTVAYIK 752
GTG+++ + + LR H V + NY G T+A +K
Sbjct: 750 GTGILRTGIQDYLRKHKHVKSHRLG---NYGEGGNGVTIAELK 789
>gi|126695576|ref|YP_001090462.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542619|gb|ABO16861.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9301]
Length = 803
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 222/730 (30%), Positives = 359/730 (49%), Gaps = 105/730 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL-------ITKRRSRMC 96
I D AS +L ++R E L KK+ +I I K L I R R
Sbjct: 158 ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTTIGDRYGRPV 208
Query: 97 VGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +K ++ K+ GI + SSSG T + EP V N L AEE +L
Sbjct: 209 LAVKVNYVDKF---KGIIHDSSSSGNTVYFEPDSVVNKGNKIASLEARITAEEFKLLKKW 265
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INIEGI 212
+ ++ + + + +L ++ A R+ +++W+ G P +F+ S I++ G
Sbjct: 266 SLVVSDNSENLIEMAAILLRLENALTRSRYSKWIGGKTP--------TFEKSPIISLIGF 317
Query: 213 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 272
HPLL+ + + PV +D + +VV
Sbjct: 318 THPLLIWEHKKKGACP----------------------------PVAVDFYINRNIKVVA 349
Query: 273 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 332
ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+NLSTF
Sbjct: 350 ITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEENLSTF 409
Query: 333 SGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 389
SGHISRI +IL+L+ + S+VL+DEIGSGTDP EG ALA ++L+ ++ + TTH
Sbjct: 410 SGHISRIKEILDLLDHKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDITFATTH 469
Query: 390 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 449
Y D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I+ A
Sbjct: 470 YGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLDESILNEA- 528
Query: 450 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 509
L+P+ + S + + L EE+ K ++ A AA L A L+ E++ +
Sbjct: 529 --ANYLKPKEVDNINS-IIKGLEEEKIKQQNSAEAAAELIARTEILHDELKRNYEYQKLN 585
Query: 510 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAA 564
A ++ E ++ + + AK + V D +LRD + + I +KE E+
Sbjct: 586 AEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVNGEDTRIIGKRLKEIETEHLT 641
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
++ + + S+ PQ G+ V +KSL + +V + ++ G R
Sbjct: 642 QKKSEK-----------SISWNPQVGDFVKIKSL-NSTGQIVGLDKKGGFYEIKCGSFRS 689
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+ N I N ++ N + ++ +ED S+ +++TSKN++D+R
Sbjct: 690 TLSVNEFEGI-NGEKPNFKSSKIEIKSTRED------------FSFS-KIRTSKNTIDVR 735
Query: 685 GMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPM 742
G+RV EA ++ + + L+++HG+GTG +K+ + L V K E +
Sbjct: 736 GLRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDAANNEG 793
Query: 743 NYGCTVAYIK 752
GC++A+IK
Sbjct: 794 GPGCSIAWIK 803
>gi|228476275|ref|ZP_04060977.1| MutS2 protein [Staphylococcus hominis SK119]
gi|228269678|gb|EEK11180.1| MutS2 protein [Staphylococcus hominis SK119]
Length = 783
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 230/767 (29%), Positives = 365/767 (47%), Gaps = 107/767 (13%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 58
+LE++ G I +Y L E + LT+L ++I C + D AS +L+ IR++
Sbjct: 109 LLEEDEGVI--KYPILNERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKIS 164
Query: 59 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 116
+R +NLD ++K A Q + +IT R R + +KA ++ GI + S
Sbjct: 165 STTQRIRQNLDRIVKSQANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQS 219
Query: 117 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 176
+SG T ++EP VE NN RL N E E IL+ LT +A ++ + +ID
Sbjct: 220 ASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQID 279
Query: 177 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 236
A+A +A+ + G P + V ++ HP+L
Sbjct: 280 FLTAKARYARSIKGTKPTFYKERTVYLPNAY------HPIL------------------- 314
Query: 237 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
N + V + + I D V+ITGPNTGGKT ++KTLGL +M++
Sbjct: 315 ----NKDTVVANTIEFIDDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQ 358
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
+GL +P + +L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE
Sbjct: 359 SGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDE 418
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
+G+GTDPSEG ALA SIL ++RD L + TTHY +L NA+ EF + TL
Sbjct: 419 LGAGTDPSEGAALAMSILDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLS 478
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 476
PTY++L G G SNA +I+K +G II +A+ ++ E S++E
Sbjct: 479 PTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE--- 526
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
LE ++ E+ L RE DL+R+ K E + + + + A +I +
Sbjct: 527 SLEKNSKRVDEQRIELEKLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSAT 586
Query: 537 QDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF----- 589
++ ++ L+D D+ + +KE E I + +D + + ++
Sbjct: 587 KEADDILKDLREMRDKKGADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHA 642
Query: 590 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 649
G++V V S G K V+E+ G+++ V VQ G +++++ PI + ++ P
Sbjct: 643 GDEVKVLSYGQK-GEVLELSGENEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTK 694
Query: 650 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSV 707
+++R QT K LDLRG R EEA LD I A +
Sbjct: 695 MVTRQNR------------------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQ 736
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++IHG GTG +++ V L+ H V + P +G TVA +K
Sbjct: 737 VYIIHGKGTGALQKAVQNHLKKHKSVQSFRGGMPSEGGFGVTVAELK 783
>gi|373494347|ref|ZP_09584952.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
gi|371968844|gb|EHO86298.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
Length = 796
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 207/740 (27%), Positives = 366/740 (49%), Gaps = 87/740 (11%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
T LE++I CI + + D AS L+ IR R + + L ++ +
Sbjct: 127 FTALEKEISRCILTEDEMA-DNASPKLKDIRRSIHRQNQAIKDKLSRIITSSSNKTYLQD 185
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
++T R R + +K ++ P G+ + S GAT F+EP+G VE NN L E
Sbjct: 186 AIVTMRDGRYVIPVKQEYRSFFP-GMVHDQSKGGATLFIEPQGVVESNNKLRELEAEEQL 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L++ +A+ REI+ ++ + ++D A+ + C + +S+ + D
Sbjct: 245 EIARILAELSSRVAEHYREIRSNLELLTKLDFIMAKGKLS------CKMHASEPKIDADG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ + +HPL +E + VP+DI++
Sbjct: 299 ELRLLSARHPL----------------------IEYKK-------------AVPVDIRIG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ R ++ITGPNTGGKT S+KT GL +M+++GL++PA + LP F + ADIGD QS+
Sbjct: 324 GDYRTLIITGPNTGGKTVSLKTAGLLVMMAQSGLHIPASHASTLPVFGDVFADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H+ IV +++ S +SLVL+DE+G+GTDP+EG ALA +IL+ D L +
Sbjct: 384 EQSLSTFSSHMKNIVSVIDKASYDSLVLVDELGAGTDPTEGAALAIAILERFYDSGALTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L + ENAA EF +ETL PTYR+L G G SNA I+K +G +I
Sbjct: 444 ATTHYNELKKYALATSGVENAAMEFDVETLTPTYRLLIGVPGKSNAFEISKKLGLSESVI 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+RA + ++ E + + S+ +++RK + A + EI + R++E++ K
Sbjct: 504 ERASEHIKHGDMEFEN-----VISSIEDDKRKAAADRLDAEEMRDEIEERLRKLEEKEKA 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAA 564
+ + A + A+ ++ ++ L K + V +D Q A + N+ E +
Sbjct: 559 ISEKRADIIAEAKREARELLRETKSAVKDVQKDLRKLQKSGARTNGFNT--GALEKSRRK 616
Query: 565 IVEAHRPDDDFSVSETNT---SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ EA + V + N+ S+ T + G++V + +LG T++ +P + ++V G
Sbjct: 617 LNEAENLVSEKVVKQVNSEPVSADTIKIGDRVKLLTLGQN-GTILSLPDEKGNLMVNIGV 675
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-- 679
++V+ + ++ I K DR+ + SS YG ++T +
Sbjct: 676 LKVKARLEDLMLINEGK----------------DRKPQAKSSSR----YGTLLRTKSSSV 715
Query: 680 --SLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
S+++ G +++A + D+ +A + ++ +IHG G G++K+ + ++L+
Sbjct: 716 SASINVMGKNLDDALADVEKYLDDVYMAGLD---MVSIIHGRGGGILKDGIRQMLKRKKY 772
Query: 733 VAKYEQESPMNYGCTVAYIK 752
V + S + G V ++
Sbjct: 773 VDSFGAASYNDGGEGVTVVR 792
>gi|314933341|ref|ZP_07840706.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
gi|313653491|gb|EFS17248.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
Length = 782
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 231/756 (30%), Positives = 366/756 (48%), Gaps = 105/756 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L E + LT+L ++I C + D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILDEKMNQLPVLTDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K + Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQSNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPT 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN RL N E E IL+ LT ++A I + +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGQVAVDADSILIAESVMGQIDFLIAKARYARS 289
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ G P + V ++ HPLL + E V
Sbjct: 290 IKGTKPTFKKERTVYLPNAF------HPLL-----------------------DKETVVA 320
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
+ + I D V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 321 NTIEFIDD------------VETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGS 368
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG
Sbjct: 369 QLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGA 428
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G
Sbjct: 429 ALAMSILDYVRNLGSLVMATTHYPELKAYSYNCEGVMNASVEFNVDTLSPTYKLLMGVPG 488
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTA 485
SNA +I+K +G II +A+ ++ E +S S + E+R +L+ R A
Sbjct: 489 RSNAFDISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKCVDEQRIELDRLVREA 548
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
H + Y++ ++ + L A K K Q+V+ A + DT++++ + LRD
Sbjct: 549 QETHDALAKQYQQYQNYEQSLMNEA---KEKANQRVKS----ATKEADTILKELRD-LRD 600
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 600
E +KE E I + + DD + + ++ G++V V S G
Sbjct: 601 NKGAE----VKEHE----LIDKKKQLDDQYEAKSIKQTVQKKKYDKINAGDEVKVLSYGQ 652
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K V+E+ G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPAKMVTRQNR---- 700
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
QT K LDLRG R EEA +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALLELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 719 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSNFRGGMPSEGGFGVTVAELK 782
>gi|312127327|ref|YP_003992201.1| muts2 family protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777346|gb|ADQ06832.1| MutS2 family protein [Caldicellulosiruptor hydrothermalis 108]
Length = 787
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 216/705 (30%), Positives = 360/705 (51%), Gaps = 89/705 (12%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E L+ +++ Q F + +P+IT R ++ +
Sbjct: 141 ILDTASPRLKEIR-DRIRRLETRIRDELNRMIRDHKIQRF----LQEPIITVRGDKLLLP 195
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAE 157
+KA HK + GI + S++GAT F+EP VE +N ++R++ SE EE IL L+
Sbjct: 196 VKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN-QIRVARSEEKEEIERILQELSQL 253
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
I+++ EIK + + E+D+ F +A +A PIL++ + IN++ +HPL+
Sbjct: 254 ISRNYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGY------INLKKARHPLI 307
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+ + E V+VITGPN
Sbjct: 308 EKERV-----------------------------------VPIDVHLGKEFDVLVITGPN 332
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L++++G++LPA + F I ADIGD QS+ Q+LSTFS H+
Sbjct: 333 TGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFSKIFADIGDEQSIIQSLSTFSAHMK 392
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + +LVL+DEIGSGTDP EG ALA +IL++L + V TTHY +L
Sbjct: 393 NIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAILKFLYRKGSKVVATTHYGELKTFA 452
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
++ RFENA+ EF + TL+PTYR+L G G SNAL I+ ++G +I++ A+ + +
Sbjct: 453 QQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLKEEIVELAKSYMSKKTL 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E +++ + +R++LE +A L E +L R +E+E + + +K +
Sbjct: 513 EL-----TDIINEMERKRKELEEALESANKLKIEAENLKRSLEEERRRFEAEKQRIKERS 567
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ ++ F + D V + F+ + A + + ++K+ E + + S
Sbjct: 568 VKEARE---FVQRVEDEVEKLFKELRKIAESLKEKEMLKQLEEKKREYENLVKSIEQASQ 624
Query: 578 SETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
E S P+ G++V+VKS D V +P + V+ G M++ V +++ I
Sbjct: 625 KEKKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPDSKGNLTVRIGIMKLSVNISDVFEI 683
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-SLDLRGMRVEEASH 693
+ED + G S+++ VQ S + S+D+RG ++A
Sbjct: 684 ------------------EEDTTVKNLGLSSKKGV--EVVQKSIDISIDVRGKTSDDAIL 723
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 724 EVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 768
>gi|383761505|ref|YP_005440487.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381773|dbj|BAL98589.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 811
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 235/781 (30%), Positives = 372/781 (47%), Gaps = 127/781 (16%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+ L E+ + L E+I CI+ + ++D AS +L IR+E + E L S L +
Sbjct: 113 FPHLAEMAADIEPCDHLVEQISHCINDRG-DVMDSASPELARIRSELRIAQERLLSTLDR 171
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + + L+T+R+ R + I+A +K + +GI + S+SGAT F+EP V+
Sbjct: 172 IIHSADIRPYLQEALVTQRQGRYVIPIRAEYKGNI-EGIIHDQSASGATLFIEPLKVVQQ 230
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L E E IL L+ +A+ ++ + + +D FA+A +A +D
Sbjct: 231 NNAVRELELQEEKEVRRILLELSTAVAEEAVYLRRNVQALARLDFTFAKARYAYALDATV 290
Query: 193 PIL--------------SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 238
P + + ++ S I++ +HPLL +P
Sbjct: 291 PEMLPFQPRRSKQKRDETEEAAAHPGSIIDLRRARHPLL---------------DP---- 331
Query: 239 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 298
TV VPID+ ++ +T ++VITGPNTGGKT ++KT+GL +LM+++G
Sbjct: 332 -----QTV-----------VPIDVYLDDDTYIIVITGPNTGGKTVTLKTVGLLTLMAQSG 375
Query: 299 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 358
L +PA RL F+ I ADIGD QS+EQNLSTFS H++ I+ ILE SLVL+DE+G
Sbjct: 376 LMIPADVGSRLSVFEGIYADIGDEQSIEQNLSTFSSHMTNIIAILEEADPHSLVLLDELG 435
Query: 359 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 418
+GTDP EG ALA ++L+ LRDR TTHY+DL NA+ EF +ETL PT
Sbjct: 436 AGTDPEEGSALAIALLENLRDRGITTFATTHYSDLKLYAHNTPGVRNASVEFDVETLSPT 495
Query: 419 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 478
Y + G G SNAL IA+ +G + I+++A+ +V RP+ Q K L+++ R+
Sbjct: 496 YELSIGLPGRSNALTIARRLGLNPVIVEKAESIV---RPDTLQADK------LLDDIRRA 546
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 538
+A AA + AK +R+A L+A Q+ Q + A+ + +
Sbjct: 547 RQEALEAA--------------ERAKARERQAQLLEADLRYQLAQ-IEQARRSVIAETRA 591
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAH-----RPDDDF-----SVSETNTSSFTPQ 588
+A+ EI L +++ S + AH R + + + E N P
Sbjct: 592 LMQAELEAARKEIEQLRRQARSGFSTGTTAHEEFLARAEKELARRSQATEEVNRRVVVPG 651
Query: 589 FGEQVHVKSL--GDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 638
E+ + S+ GD + V+ + + VQ G R+++
Sbjct: 652 SAEERLIGSIEVGDTVWVPSLQASGEVLAIHSASNEADVQLGNFRLKL------------ 699
Query: 639 RKNAANPAPRLR-KQQEDRQSGSAGSSNEEASYGPRVQTSKNS----LDLRGMRVEEASH 693
P RL +Q+ +++ ++G + RV+ +S LDLRG RVEE
Sbjct: 700 ------PMKRLELRQKAVKETAASGVTI-------RVEVPTSSPGIELDLRGERVEEGLE 746
Query: 694 QLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+L+ L + +R + +IHG GTG +K V E L++HP V P G V +
Sbjct: 747 RLERYLDEAYRARLPFVRIIHGHGTGAMKSAVREALKHHPLVGSMRAGDPGEGGDGVTMV 806
Query: 752 K 752
K
Sbjct: 807 K 807
>gi|445059987|ref|YP_007385391.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
gi|443426044|gb|AGC90947.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
Length = 782
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 220/730 (30%), Positives = 361/730 (49%), Gaps = 105/730 (14%)
Query: 39 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 94
C + D AS +L+ IR++ +R +NLD ++K +Q+ + + ++T R R
Sbjct: 142 CDAHDLYDHASYELQSIRSKISSTNQRIRQNLDRVVK---SQVNRKK-LSDAIVTVRNDR 197
Query: 95 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +KA ++ +GI + S+SG T ++EP VE NN RL N E E IL+ L
Sbjct: 198 NVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMNNQISRLRNDEAVERERILTEL 256
Query: 155 TAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 213
T+++A E + L + ++ +D A+A +A+ + G P ++ V ++
Sbjct: 257 TSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTKPTFHNERTVYLPNAY------ 309
Query: 214 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 273
HPLL + +N+ D+E V+I
Sbjct: 310 HPLL------DHNTVVANTIEFVDDIE-----------------------------TVII 334
Query: 274 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 333
TGPNTGGKT ++KTLGL +M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS
Sbjct: 335 TGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFS 394
Query: 334 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA SIL ++R+ L + TTHY +L
Sbjct: 395 SHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALVMATTHYPEL 454
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
NA+ EF +ETL PTY++L G G SNA +I+K +G II +A+ ++
Sbjct: 455 KAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIG 514
Query: 454 RLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
E +S S + E+R +L+ + A + H E+ Y++ ++ K L A
Sbjct: 515 TDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHDELEKQYQQYQNYEKSLMDEA- 573
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 571
K K Q+V+ A + D ++++ +LRD + +KE E I + +
Sbjct: 574 --KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD----VKEHE----LIDKKKQL 618
Query: 572 DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
DD + + ++ G++V V S G K V+E+ GD++ V VQ G +++++
Sbjct: 619 DDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEVLELVGDEEAV-VQMGILKMKL 676
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
PI + ++ P + +R QT K LDLRG
Sbjct: 677 ------PIEDLEKMKKKKETPTKMVTRANR------------------QTVKTELDLRGY 712
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM-- 742
R E+A +LD L A + +++IHG GTG +++ V + L+ H V + P
Sbjct: 713 RYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGVQQHLKRHKSVKTFRGGMPSEG 772
Query: 743 NYGCTVAYIK 752
+G TVA +K
Sbjct: 773 GFGVTVASLK 782
>gi|18310863|ref|NP_562797.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens str. 13]
gi|38604940|sp|Q8XJ80.1|MUTS2_CLOPE RecName: Full=MutS2 protein
gi|18145545|dbj|BAB81587.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 786
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 351/719 (48%), Gaps = 87/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNTQYLQDSLYTVRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+ + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSVLVYKN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 637
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|257439769|ref|ZP_05615524.1| MutS2 protein [Faecalibacterium prausnitzii A2-165]
gi|257197789|gb|EEU96073.1| MutS2 family protein [Faecalibacterium prausnitzii A2-165]
Length = 803
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 219/704 (31%), Positives = 352/704 (50%), Gaps = 98/704 (13%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IRA + L+S+++ + + + + +++ R R V +K+ ++ + GI +
Sbjct: 158 IRATENSIRDRLESMVRNMDTSKY----LQESVVSIRNGRYVVPVKSEYRGEV-SGIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y +LE
Sbjct: 213 VSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLE 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID+ A+A A M P V DSS ++ +HPL+ +P
Sbjct: 273 IDVLLAKARLALDMKAFKP------SVRTDSSFSLIRARHPLI---------------DP 311
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
K VP+DI + E ++ITGPNTGGKT ++KT GL M
Sbjct: 312 KKC--------------------VPVDIALGKEYDSLIITGPNTGGKTVTLKTAGLLCAM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+
Sbjct: 352 AQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLL 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+ EF LET
Sbjct: 412 DELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLET 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTY++ G G SNA I++ +G ++I+ AQ Q L E
Sbjct: 472 LRPTYKLSVGVPGKSNAFLISEKLGIPERVIEAAQ-------------------QHLSAE 512
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNF 527
++L++ L ++ +E +DE ++L A+H L+A + QQ + EL
Sbjct: 513 DKRLDAVLGQLDDLKLQL----KESQDEVEELKNEASHQLEAAQKKRDELIQQGENELEA 568
Query: 528 AKV-------QIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSE 579
A+ Q+++ ++LR DE S ++++ A A E+ + V
Sbjct: 569 ARAKARALAQQVESKAYALTDELRQLQKDERLSTQQKAQRAREIAKKESEKLFIGTEVVH 628
Query: 580 TNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
F P + G++V + L ++LATV+ +P + VLV+ G ++ ++ ++ P
Sbjct: 629 NPVKEFVPLKEVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKIPLKGLKQ-P 686
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ-TSKNSLDLRGMRVEEASHQ 694
+ K P P+ + QQ R S G +N RVQ ++K L+L G+ V+EA +
Sbjct: 687 D---KLIKEPQPKTKAQQ--RYSRLTGDANRLNGRVERVQRSAKMELNLLGLTVDEALPE 741
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D I A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 742 VDAYIDRAILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 785
>gi|134299495|ref|YP_001112991.1| MutS2 family protein [Desulfotomaculum reducens MI-1]
gi|134052195|gb|ABO50166.1| DNA mismatch repair protein, MutS family [Desulfotomaculum reducens
MI-1]
Length = 782
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 224/743 (30%), Positives = 357/743 (48%), Gaps = 107/743 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA-ERKRNM--ENLDS 68
RY L EL ++ +LE+ I + I D + E L++ R +R +N E +++
Sbjct: 111 RYPLLSELAESLTNQAQLEKNILQAVLPGGEIADDASPELLQIRRGIQRSQNRIRERMEN 170
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+++ Q + + P+IT R R V +K ++ +P GI + S+SGAT F+EP
Sbjct: 171 IIRSSDNQKY----LQDPIITIRNDRYVVPVKQEYRNQIP-GIVHDQSASGATLFVEPMA 225
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE NN +L +E E IL L+ E++ +I ++ + ++D A+A ++ +
Sbjct: 226 VVEANNEVRQLVAAEKQEIQRILGQLSQEVSGVHEDISIALETLGDLDFIMAKARYSLKL 285
Query: 189 DGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ P IL+ I+I+ +HPLL G +
Sbjct: 286 NAWSPKILAG-------PMIDIKKGRHPLLPGDA-------------------------- 312
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VP I + + +VITGPNTGGKT ++KT+GL SLM++AGL++PA+
Sbjct: 313 ----------VPATISLGKAFKTLVITGPNTGGKTVTLKTVGLFSLMTQAGLHIPAEAGT 362
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+ F + ADIGD QS+EQ+LSTFS H++ +V IL+ SLVL+DE+G+GTDP+EG
Sbjct: 363 EMGVFKQVFADIGDEQSIEQSLSTFSSHMTNLVRILDRAGEGSLVLMDELGAGTDPTEGA 422
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA +IL+ L R + TTHY++L ENA+ EF +ETLRPTYR+L G G
Sbjct: 423 ALARAILEELHQRGACTLATTHYSELKNYAYATPGVENASVEFDVETLRPTYRLLIGRPG 482
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
SNA I+ +G R+II+ A+ + +Q +EL L + ++ E + AA
Sbjct: 483 RSNAFEISARLGLRREIIESARGFL-----TTEQVEVAELISRLEKTQQAAEKDRQEAAL 537
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E L +DL + + K ++ + + A+++ + V++ ++L + S
Sbjct: 538 LRRESEQLKERYHALEQDLRAKKEAILVKAHEEASRMVRQARLEAEDTVKELRSRLAEES 597
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF------------GEQVHV 595
A K E AI H + + ++ TP+ GE+V +
Sbjct: 598 A-------KNREQAI------HHARNKLQQVTSKVAAKTPKRTADGEIPRQVKPGEEVFL 644
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
K A VV V G++ V VQ G M++ V +R + K
Sbjct: 645 PKYNQK-AYVVGVSGNN--VQVQVGIMKMSVPMQELRTVKEVKV---------------- 685
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 713
++G S + Q SLDLRGM +EA +++ L A S + ++HG
Sbjct: 686 ----TSGQSKVGQVLMDKAQHIGTSLDLRGMTADEAMLEIEKYLDDAFLAGLSSVTLVHG 741
Query: 714 MGTGVVKERVLEILRNHPRVAKY 736
GTG ++ V L+NHPRV +
Sbjct: 742 KGTGALRTSVQRELKNHPRVKTF 764
>gi|289422692|ref|ZP_06424532.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
gi|289156871|gb|EFD05496.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
Length = 807
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 214/721 (29%), Positives = 349/721 (48%), Gaps = 90/721 (12%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L +IR + +N+ S L + + + +I+ R R + +KA ++
Sbjct: 163 DNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQDAIISMRGDRFVIPVKAEYRS 222
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
++ GI + S SGAT F+EP VE NN +L E E IL+ L+ + + RE+
Sbjct: 223 VIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETEEIERILAELSGMVGEVAREL 281
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +D AFA+ + M V PIL+ D S I +HPL+ ++
Sbjct: 282 ISNQEILARLDFAFAKGKLSIAMKAVDPILNR------DKSFRIVKGRHPLIDKKTV--- 332
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+N+ L D + ++ITGPNTGGKT ++
Sbjct: 333 ---VANTVYLGKDFSS-----------------------------LLITGPNTGGKTVTI 360
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
K +GL SLM++ GL++PA + FD + ADIGD+QS+EQNLSTFS H++ IVDI++
Sbjct: 361 KMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSIEQNLSTFSSHMTSIVDIVDR 420
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L + TTHY++L EN
Sbjct: 421 VTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCIATTHYSELKKYALAKKGVEN 480
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
AA EF +ETL PTYR+L G G SNA I++ +G + +I A+ ++ E +
Sbjct: 481 AAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVILNAKFYMDNDDIELE----- 535
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
++ QS+ + R K E + A ++ +EI E ED+ K L+ + + + +
Sbjct: 536 DVLQSVEKNRLKTEEELSRAEAMRSEIEARKNEYEDKIKKLEESKSKVMENARSEAFSIV 595
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
AK + + +++ +++++ + + I+E I + +P + S
Sbjct: 596 RQAKEETEVLIKKLRKLEQESASKDKDRRIEEIRREIGQTMGGLQP--------SLESMV 647
Query: 586 TPQF----------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
P+F G +V++ SL + TV+ + +VQ G M++ + +++ I
Sbjct: 648 VPKFASKEIKSLKAGAEVNIVSLRQE-GTVISADDNKKEAVVQVGIMKMTLPYKSLKII- 705
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N R ++ +SG+ K +DLRGM +EEA +
Sbjct: 706 ---EKKEKNTVTRTTRKVIRSKSGNV----------------KREVDLRGMNLEEAIVAV 746
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYI 751
D L AC + VIHG+GTGV+K + E L+ HP V + Q G T+ +
Sbjct: 747 DKYLDDACMAGHDEVTVIHGIGTGVLKSGIGEHLKRHPHVKSQRKGQYGEGGIGVTIVEV 806
Query: 752 K 752
K
Sbjct: 807 K 807
>gi|73662960|ref|YP_301741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|123642323|sp|Q49WR1.1|MUTS2_STAS1 RecName: Full=MutS2 protein
gi|72495475|dbj|BAE18796.1| MutS-like protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 782
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 219/735 (29%), Positives = 360/735 (48%), Gaps = 115/735 (15%)
Query: 39 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 94
C + D AS +L+ IR++ +R +NLD ++K A Q + ++T R R
Sbjct: 142 CDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQANQ----KKLSDAIVTVRNER 197
Query: 95 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +KA ++ +GI + S+SG T ++EP VE +N RL N E E ILS L
Sbjct: 198 NVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQISRLKNDEAIERERILSAL 256
Query: 155 TAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 213
T E+A+ E + + + ++ +ID A+A +A + G P + D ++ +
Sbjct: 257 TVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTKPQFTK------DRTVYLPKAF 309
Query: 214 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 273
HPLL ++ +N+ D+E V+I
Sbjct: 310 HPLLDKQTV------VANTIEFAQDIE-----------------------------TVII 334
Query: 274 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 333
TGPNTGGKT ++KTLGL +M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS
Sbjct: 335 TGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFS 394
Query: 334 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL ++ + L + TTHY +L
Sbjct: 395 SHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLVMATTHYPEL 454
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
NA+ EF + TL PTY++L G G SNA +I+K +G + K+IQ+A+ ++
Sbjct: 455 KAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQKAKSMI- 513
Query: 454 RLRPERQQHRKSELYQSLM-------EERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
+ + +E+ SL E+R +L+ R A H + Y + ++ K L
Sbjct: 514 ----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNHEKQL 569
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
A K K Q+V+ A + D ++++ +LRD + +KE E I
Sbjct: 570 MNEA---KEKANQRVKS----ATKEADDILKELR-ELRDQKGAD----VKEHE----LID 613
Query: 567 EAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ + DD + + ++ G++V V + G K V+E+ D++ +VQ G
Sbjct: 614 KKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQK-GEVLELI-DNNEAVVQMGI 671
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+++++ P+ + ++ P ++E+RQS K L
Sbjct: 672 IKMKL------PLEDLEKTKKTKSEPTKMIKRENRQS------------------IKMEL 707
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
DLRG R +EA +D L A + +++IHG GTG +++ V L+ H VA Y
Sbjct: 708 DLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQNHLKRHKSVASYRNG 767
Query: 740 SPM--NYGCTVAYIK 752
P +G TV IK
Sbjct: 768 MPSEGGFGVTVVEIK 782
>gi|357050429|ref|ZP_09111627.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
gi|355381082|gb|EHG28209.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
Length = 787
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 229/730 (31%), Positives = 361/730 (49%), Gaps = 114/730 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L +IR +R+ E LDSL++ A+ + ++T R R + +
Sbjct: 146 LTDEASPELRVIRQNIRRSERTIRETLDSLVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + SSSG T F+EPK V+ NN RL +IAE T I L+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN---RLRQHQIAERTEIERILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + + + P +++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVPAINTDNHVVFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGEDYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M ++GL + ++ F I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVD+L+ V SLVL DE+G+GTDP EG ALA +IL L R + TTHY +L
Sbjct: 396 TTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAILDELGARSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+K +G D +II++A+++++
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDTQIIEQAKQIMDGES 515
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--------DR 508
Q L E LE++ + + + E+ E E K+L +
Sbjct: 516 ------------QDLNEMIADLENRRKMTETEYLEMRHYVEEAERLQKELKQAYNFFFEE 563
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAI 565
R A L AK ++ Q + AK + + ++ D N QL S +KE E +A +
Sbjct: 564 REAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLSSG-----QSHVKEHELIAARTKL 617
Query: 566 VEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+ H+ + V + ++ T + G++V V S G + T+++ G VQ G ++
Sbjct: 618 SDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQR-GTLIKKMGQSQW-QVQLGILK 675
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ + +++++P A P +E Q + E+S+ P N LDL
Sbjct: 676 MTLPESDLQP---------AAPV------KEPVQRVVHTVRSAESSHVP------NQLDL 714
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG R EEA +++D L A + ++HG GTG +++ + E L+NH V +E +P
Sbjct: 715 RGKRYEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITEYLKNHRSVKSFE-FAP 773
Query: 742 MNYGCTVAYI 751
N G A I
Sbjct: 774 ANQGGNGATI 783
>gi|153955797|ref|YP_001396562.1| recombination and DNA strand exchange inhibitor protein
[Clostridium kluyveri DSM 555]
gi|219856164|ref|YP_002473286.1| hypothetical protein CKR_2821 [Clostridium kluyveri NBRC 12016]
gi|229486370|sp|A5N245.1|MUTS2_CLOK5 RecName: Full=MutS2 protein
gi|254766597|sp|B9E5U7.1|MUTS2_CLOK1 RecName: Full=MutS2 protein
gi|146348655|gb|EDK35191.1| MutS-related protein [Clostridium kluyveri DSM 555]
gi|219569888|dbj|BAH07872.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 786
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 227/726 (31%), Positives = 360/726 (49%), Gaps = 98/726 (13%)
Query: 25 FLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQA 80
L LE+KI I+ + I DRAS L IR R +N + ++SL++ ++ +
Sbjct: 127 LLKGLEDKIFISIESEDEI-SDRASSLLYNIRKSIRDKNASVRDKVNSLIRNYSSYL--- 182
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 140
L T R R + ++A +K L+P G+ + SSSG+T ++EP V NN L
Sbjct: 183 ---QDNLYTIRGDRYVLPVRAENKALVP-GLVHDQSSSGSTLYIEPMALVNLNNEIKELK 238
Query: 141 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 200
E AE IL L+ EI + IK D + E+D FA+A F ++G PI++
Sbjct: 239 LKEKAEIDRILYELSKEIHDNIVVIKNNADIIWELDFIFAKAKFGSELNGNIPIVNDNCI 298
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
+ +EG +HPL+ TV VP+
Sbjct: 299 IDI-----VEG-RHPLI------------------------DRKTV-----------VPM 317
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
D+ + + +VITGPNTGGKT ++KT+GL +M+ +GL +PA+ + + +F I ADIG
Sbjct: 318 DVYMGKDFTCLVITGPNTGGKTVALKTMGLLHIMALSGLMIPARENSTVGFFTEIFADIG 377
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQNLSTFS H++ I++I+ +SL+L DE+G+GTDP+EG ALA SIL+ L+DR
Sbjct: 378 DEQSIEQNLSTFSSHMTNIINIINNSDEKSLILFDELGAGTDPTEGAALAVSILENLKDR 437
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ V TTHY++L K ENA+ EF ++TL+PTY+++ G G SNA I+K +G
Sbjct: 438 GSMIVATTHYSELKAYALKSNGVENASVEFDVDTLKPTYKLMIGIPGKSNAFEISKRLGL 497
Query: 441 DRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 498
II+ A++ + E L+ E +L QSL E+R K E+ R A L E + +
Sbjct: 498 PEFIIKAARENIASEALKFE-------DLIQSLQEKRIKAENYFREAEILKREAAKIKEK 550
Query: 499 IE------DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
E E +D AH KA+E + +E + D +++D + + +
Sbjct: 551 YEQKAIRLQEVRDKSITEAHRKAREIIRESKE------EADRILKDIRELEKMGYSSSVK 604
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++E + +E + + SE + + GE+V + SL K+ V+ P +
Sbjct: 605 HELEERRKMLKDKLENVEENLYKAKSEDGQRLKSVKEGEEVFIPSLNQKV-LVLSKPDNK 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
V VQ G M++ V +R AP+ + D++ + N
Sbjct: 664 GEVQVQAGIMKISVNLKELR-------------APKGSTKNTDKKLKREANLN------- 703
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+++ S+DLRGM EA++ D L A + +IHG GTG+++ + +L++H
Sbjct: 704 -LRSVATSVDLRGMDSIEAAYITDKYLDDAYVAGLKEVTIIHGKGTGILRSSITNMLKSH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 SHVKNY 768
>gi|334127861|ref|ZP_08501763.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333388582|gb|EGK59756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 784
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 218/703 (31%), Positives = 335/703 (47%), Gaps = 92/703 (13%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R + L ++L A Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITRELQTAQARAKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + S+SGAT F+EP VE NN ++ + E IL LTAEIA++
Sbjct: 200 EYRNYFP-GVIHDQSASGATLFVEPLATVELNNTVRQMELARTQEIQRILRKLTAEIAQN 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
R ++ + IDL FARA A+ M+ P L+ V + +HPLL
Sbjct: 259 ARILEENCAILSTIDLIFARARLAREMEAYPPTLNRNGRVHLKRA------RHPLL---- 308
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D VPIDI++ V++ITGPNTGGK
Sbjct: 309 ------------P-------------------RDKVVPIDIELGKSFSVLLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L+++ G +LP +P + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQTGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ + L+L+DE+G+GTDP EG ALA SI+++ R V TTHYA L T
Sbjct: 398 IIDKAEQGDLILLDEVGAGTDPDEGAALARSIIEHFLRRNICTVATTHYAALKTFAYTQT 457
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF L+TLRPTYR+L G G SNA +I++ +G I+ RA+ + E
Sbjct: 458 GVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLSPDIVARAEIYIS----EEHT 513
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
H ++ + L +E++ E++ + AE+ + E + L K ++
Sbjct: 514 HFEN-VVNELEQEKKDYEARNHMLHAKEAELTAREARLCTERDTFTKMRQELLHKACEEA 572
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 581
+ A+ + ++ + Q D E I+E+ + EA+ D ++ N
Sbjct: 573 NNIVRMARRSAEETIKSLKEQFDDHGVKERRKAIQEARDRLN---EAYVEGD----AQRN 625
Query: 582 TSSFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
S P Q G+ V++ SL + TV+ + G + T VQ G +R VK N R +
Sbjct: 626 ESVGKPVRAGEVQSGDIVYIPSLAQE-GTVLAIQGKELT--VQVGGLRTIVKMNACRFV- 681
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
R +KQ+ + S+ S + P++ D+RGM V EA L
Sbjct: 682 -----------ARKKKQRAGKLHVSSSISGKATDISPQI-------DVRGMTVAEAESVL 723
Query: 696 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
I A + S + +IHG GTG +++ + + L++H V +
Sbjct: 724 GKFIDDAVFMGLSKILLIHGKGTGALRQGLQDYLKHHRSVLNF 766
>gi|153810971|ref|ZP_01963639.1| hypothetical protein RUMOBE_01362 [Ruminococcus obeum ATCC 29174]
gi|149832859|gb|EDM87942.1| MutS2 family protein [Ruminococcus obeum ATCC 29174]
Length = 793
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 226/726 (31%), Positives = 345/726 (47%), Gaps = 94/726 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--- 82
LT L +I CI + I D AS L IR RNM+ + + A +
Sbjct: 128 LTPLSTEIRRCILSEEEIS-DDASPALRQIR----RNMKITNDRIHTQLAGLVNGSARTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN L
Sbjct: 183 LQDSVITMRNGRYCIPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQ 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ +IA + I ++ ++++D FARA A M+ P+ + +
Sbjct: 242 EQKEIEVILADLSQQIATEQEAISLNLELMVQLDFIFARATLAMEMNASEPVFNDEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
IN++ +HPL+ N + VPIDI
Sbjct: 300 ----INLKKARHPLI-------------NKKKV----------------------VPIDI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ E ++VITGPNTGGKT S+KT+GL +LM ++GL++P + L F + ADIGD
Sbjct: 321 RLGDEFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFHEVYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L R SLVL DE+ SGTDP+EG ALA SIL YL +R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLGKADRHSLVLFDELCSGTDPTEGAALAISILSYLHERGI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L + ENA EF++ETL PTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKVFALSASGIENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGIPE 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II++A++ + Q ++ SL E R +E++ A EI L +++E++
Sbjct: 501 SIIEKAREQI-----NEQDESFEDVLTSLEESRITIENERTEIAQYKLEIETLKKQLENK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADE-----INSL 554
+ LD + + + ++ + L AK D ++ F N+ D +A E +
Sbjct: 556 QEKLDVQKERIIRQANEEAHKVLQDAKDYADQTMKLFHKFHNEYVDTAAVERERQQLRQR 615
Query: 555 IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 614
+ ++E +A +P + T+ G+ V V S+ K TV P
Sbjct: 616 LNKAEQKMA------QPTPKKKPKKVLTAK-DIHLGDTVRVLSMNLK-GTVSTRPDSKGY 667
Query: 615 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED--RQSGSAGSSNEEASYGP 672
+ VQ G +R +V +++ I P L K R S SA S E
Sbjct: 668 LFVQMGIIRSKVHISDLELI-----DEPVITTPSLSKTGAGKIRMSKSASVSTE------ 716
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
++L G V+EA +LD L A + ++HG GTG +++ V L+
Sbjct: 717 --------INLLGKTVDEAVAELDKYLDDAYIAHLKTVRIVHGKGTGALRKGVHNYLKRQ 768
Query: 731 PRVAKY 736
VA Y
Sbjct: 769 KHVASY 774
>gi|15615668|ref|NP_243972.1| recombination and DNA strand exchange inhibitor protein [Bacillus
halodurans C-125]
gi|20139206|sp|Q9K8A0.1|MUTS2_BACHD RecName: Full=MutS2 protein
gi|10175728|dbj|BAB06825.1| DNA mismatch repair protein [Bacillus halodurans C-125]
Length = 785
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 231/746 (30%), Positives = 361/746 (48%), Gaps = 102/746 (13%)
Query: 1 MLEQECGNIFHRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 59
M+E+E ++ PLL E + LT+LE I CID + LD AS L +R +
Sbjct: 108 MIEEEEADL-----PLLGEFARQIVPLTDLERAIKQCIDDNGHV-LDSASPTLRTLRHQI 161
Query: 60 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 119
+ N+ S L+ + A + ++T R R + +K ++ GI + S+SG
Sbjct: 162 RSFEANVRSKLEGITRSSNTAKMLSDAIVTIRNDRYVIPVKQEYRGAF-GGIVHDQSASG 220
Query: 120 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 179
AT F+EP+ VE NN E E ILS L+ ++++ ++ +D + E+D
Sbjct: 221 ATLFVEPQAVVEINNQLREAKAKEQREIERILSELSMQVSEHVDDLFVNVDVLAELDFIM 280
Query: 180 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 239
ARA + + + PIL+++ ++ +HPL+ P
Sbjct: 281 ARAHYGKAIRATQPILNNRGYLLIKQG------RHPLI----------------P----- 313
Query: 240 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 299
D VPIDI++ +VITGPNTGGKT ++KT+GL +LM+++GL
Sbjct: 314 --------------DDEIVPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGL 359
Query: 300 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 359
++PA+ L F + ADIGD QS+EQ+LSTFS H++ IVDIL V ESLVL DE+G+
Sbjct: 360 HVPAEEESELAVFKHVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGA 419
Query: 360 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 419
GTDP+EG ALA +IL + R V TTHY++L NA+ EF +ETL PTY
Sbjct: 420 GTDPTEGAALAIAILDDVYRRGARIVATTHYSELKGYAYNREGVMNASVEFDVETLSPTY 479
Query: 420 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 479
R+L G G SNA I+K +G + KII++A+ + + + + SL + ++ E
Sbjct: 480 RLLIGVPGRSNAFAISKRLGLEEKIIEQAKAHI-----DEDASQVESMIASLEQSQKSAE 534
Query: 480 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV--- 536
S A E L +++ + DL++ + A+ QQ +Q + AK + + ++
Sbjct: 535 SDWEEAEKALQEAEQLRLDLQKKLDDLEKEKERILAEAEQQAEQAVKDAKEEAEVIISEL 594
Query: 537 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 596
+D + Q +I K E A + + + + F P G++V V
Sbjct: 595 RDLQKQGVSVKEHQIIDAKKHLEEAAPKLTKQQKK---VKRTAEKKREFKP--GDEVKVL 649
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQ 652
S G K V +V + VQ G M+++V+ +++ RP P + P +R
Sbjct: 650 SFGQKGHIVEKV--SEAEYQVQMGIMKMKVEASDLQLIDRPQPVETK-----PLATIR-- 700
Query: 653 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSV 707
GS + K LDLRG R EEA ++ D LA + S S
Sbjct: 701 ---------GSDHH----------VKPELDLRGERYEEAMLKVEKYLDDALLAGYASVS- 740
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRV 733
+IHG GTG +++ V ++L+ HP V
Sbjct: 741 --IIHGKGTGALRKGVKDLLKRHPHV 764
>gi|238917772|ref|YP_002931289.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
gi|259511156|sp|C4Z417.1|MUTS2_EUBE2 RecName: Full=MutS2 protein
gi|238873132|gb|ACR72842.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
Length = 787
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 225/737 (30%), Positives = 351/737 (47%), Gaps = 86/737 (11%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
HR + +L+N + L +I CI + I D AS +L IR + + + S L
Sbjct: 108 HREDSISGMLENLATVDALNSQIKKCIISEDEI-SDDASSNLRSIRRSKSIANDRIHSEL 166
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K+ + +IT R+ R C+ +KA +K P G+ + SS+G+T F+EP V
Sbjct: 167 NKLLNSPTYRTYLQDYVITTRQGRYCLPVKAEYKSAFP-GMIHDQSSTGSTLFIEPAAVV 225
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN L E AE IL+ L+A+ + E+ + ++E+D FA+A A+ M
Sbjct: 226 KLNNDIRELELKEAAEIEVILADLSAKAGEHTEELLCDYEILVELDCIFAKAQLARHMHA 285
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P++++ INI+ +HPL+ ++
Sbjct: 286 SRPVMNTSG------IINIKKGRHPLIESHTV---------------------------- 311
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPIDI + + ++++ITGPNTGGKT S+KT+GL +LM+++GL++PA +H +
Sbjct: 312 -------VPIDIYLGTDFKLLIITGPNTGGKTVSLKTVGLLTLMAQSGLFIPALDHSDIA 364
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I ADIGD QS+EQ+LSTFS H++ V IL+ LVL DEIG+GTDP+EG ALA
Sbjct: 365 VFKNIYADIGDEQSIEQSLSTFSSHMTNTVKILKEADENCLVLFDEIGAGTDPTEGAALA 424
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+IL L+ R + TTHY+++ ENA+ EF +E+LRPTYR+L G G SN
Sbjct: 425 IAILNDLKMRGVTTMATTHYSEIKLYALSTEGVENASCEFDVESLRPTYRLLIGIPGKSN 484
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I+K +G I+ A ERL E ++ L R LE + S A
Sbjct: 485 AFAISKKLGLPDYILSDAS---ERLNAEDVHFE--DIVSDLEHARISLEKEQAEVESYKA 539
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-LRDASAD 549
EI L +++ + + LD R ++ K +Q L AK D ++ + A +
Sbjct: 540 EIASLKEKLQAKNERLDERTDNIIRKANEQAAAILKDAKDFADETIKAMNKHGMTVAELE 599
Query: 550 EINSLIKESES-------AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
+ + ++E + A V+AH+ D +SE F +HVK L +
Sbjct: 600 KHRTAVREKMNKNQAKLKVEPAKVKAHKAHD---ISE---------FKTGMHVKVLTMNV 647
Query: 603 A-TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+ TV + V VQ G + ++ N+ + + K A P+ + + S SA
Sbjct: 648 SGTVSAIHPAKKQVTVQVGALSTKIDIKNLEILSDYKEPKEA-PSKAAGGSGKIKMSKSA 706
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
G S E ++L G V+EA +LD L A + ++HG GTG +
Sbjct: 707 GISTE--------------INLLGCTVDEAVARLDKYLDDAYIARIPQVRIVHGKGTGAL 752
Query: 720 KERVLEILRNHPRVAKY 736
+ V LR P + +
Sbjct: 753 RNGVTAYLRGVPYIKSF 769
>gi|311031396|ref|ZP_07709486.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. m3-13]
Length = 785
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 224/750 (29%), Positives = 364/750 (48%), Gaps = 93/750 (12%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+L E + ELE I CID + +LD AS+ L IR + + R E L+S+
Sbjct: 117 PILKEYMDQLIIYPELERNIKNCID-EYGEVLDGASDKLRGIRQQLRSTESRVREKLESM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
++ AQ + I IT R R + +K ++ GI + SSSGAT F+EP+
Sbjct: 176 IRSSNAQKMLSDAI----ITIRNERYVIPVKQEYRSSY-GGIVHDQSSSGATLFIEPQQV 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN+ E E IL+ L+A++A+ RE+ + + EID FA+A + + +
Sbjct: 231 VDLNNVLQEAKVKEKLEIDRILAELSADVAEVARELLENVHILAEIDFMFAKAKYGKHIR 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
G P ++++ ++ + +HPL+
Sbjct: 291 GTKPEINNEKYIRLVQA------RHPLI-------------------------------- 312
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
D VP I++ + +VITGPNTGGKT ++KTLGL ++M+++GL++PA++ +
Sbjct: 313 ---NEDEVVPNTIELGKDYTSIVITGPNTGGKTVTLKTLGLLTIMAQSGLHVPAQDGSEV 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F+ + ADIGD QS+EQ+LSTFS H+ IVDIL+ V +SLVL DE+G+GTDP EG AL
Sbjct: 370 GVFNAVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDHDSLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + R + TTHY +L NA+ EF ++TL PTYR+L G G S
Sbjct: 430 AISILDEVYQRGACVIATTHYPELKAYGYNRESVVNASVEFDVDTLSPTYRLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA++ V ++ + SL +++ E + R A +
Sbjct: 490 NAFEISKRLGLSMEVIDRAKEFV-----SEDSNKVENMIASLEASQKRAEEEWREAEKIR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
L+ ++E + ++L+ + L K ++ ++ + AK + + V+++ + A+
Sbjct: 545 KTSQQLHEDLEQQMQELNEQRDKLYEKAAEKAEKMVEDAKEEAEKVIRELRKMRMEQHAN 604
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +++ + V + E + + P G++V V SL K +V+
Sbjct: 605 VKEHELIDAKKRLEGAVPTVKKSAATKKQEVSNQTLEP--GDEVKVMSLNQK-GHLVQKT 661
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
GD + VQ G M+++VK +I+ + + P P E + + + S
Sbjct: 662 GDKEW-QVQIGIMKMKVKTKDIQYV--------SRPKP-----VETKPLATIKGKDYHVS 707
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVL 724
LDLRG R E A ++ D LA + S +IHG GTG ++ V
Sbjct: 708 I---------ELDLRGERFENALMRVEKYLDDATLAGYHRVS---IIHGKGTGALRVGVQ 755
Query: 725 EILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L+NH V Y + S G TV +K
Sbjct: 756 NYLKNHRSVKNYRFGEASEGGTGVTVVELK 785
>gi|392957411|ref|ZP_10322935.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
gi|391876818|gb|EIT85414.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
Length = 787
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 218/747 (29%), Positives = 365/747 (48%), Gaps = 85/747 (11%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
PLL ++ + L ELE I CID + +D AS +L IR + + R E L+S+
Sbjct: 117 PLLAARVEEIDPLQELEAAIKACIDDNGHV-MDSASPELRTIRGQLRTFEARVREKLESM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
++ + Q + +IT R R + +K ++ G+ + SSSGAT F+EP+
Sbjct: 176 VRSSSYQKM----LSDTIITIRNDRFVLPVKQEYRANF-GGMVHDQSSSGATLFIEPQAI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
+ NN E E IL L+ + + + + + + +ID FA+A +++ +
Sbjct: 231 ITINNQLKEAKAKETREIEKILRELSGVVGEHAEPLLHNVAVLAQIDFIFAKAFYSRELK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++ Q S++I +HPL+ ++
Sbjct: 291 ATKPIMNDQQ------SMSIIKARHPLIDAEAV--------------------------- 317
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPID + + ++ITGPNTGGKT ++KT+GL SLM+++GL +PA+ +
Sbjct: 318 --------VPIDATLGGAFQSLIITGPNTGGKTVTLKTIGLLSLMAQSGLQIPAEEQSEM 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F+ I ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ +SLVL DE+G+GTDP EG AL
Sbjct: 370 TVFETIYADIGDEQSIEQSLSTFSSHMVNIVDILKTVNYKSLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL Y+ R V TTHY++L NA+ EF++ETLRPTY++L G G S
Sbjct: 430 AISILDYVFARGARVVATTHYSELKAYAYNREGVMNASVEFNVETLRPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I++ +G D +II A+ + + ++ + +SL + +++ E + A +L
Sbjct: 490 NAFEISRRLGLDVRIIDEAKAQI-----SAEDNKIDNMIRSLEDNQKRAEFEREEAIALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L ++++ + + L+ L + ++ ++ + AK + V+++ ++A
Sbjct: 545 QDAEKLKQDLQQKLEQLEAERDGLLEQAERKAEEAVAAAKKTAEDVIKELRTFQQEAGNV 604
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ + LI+ + A + F P G++V V S G K + +V
Sbjct: 605 KEHRLIEARKKLDEATPTLRTKKKKQGAPKPKAVDFEP--GDEVKVLSFGQKGHIIAKVS 662
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
+ + VQ G +++ V +N++ + K K+QE R S++ S
Sbjct: 663 NQEYS--VQIGILKMNVSRNDLELLKQPK-----------EKKQEPRAFVKVQGSDDHVS 709
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
LDLRG R E+A ++D L A + + +IHG GTG ++ V ++L
Sbjct: 710 ---------PELDLRGKRYEDAMLEVDKYLDEAMLAGFAQVSIIHGKGTGALRSGVQQLL 760
Query: 728 RNHPRV--AKYEQESPMNYGCTVAYIK 752
+ HP V + + G TVA +K
Sbjct: 761 KTHPNVKSTRMGAANEGGSGMTVAILK 787
>gi|326201810|ref|ZP_08191681.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
gi|325988410|gb|EGD49235.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
Length = 792
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 222/727 (30%), Positives = 353/727 (48%), Gaps = 102/727 (14%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGID 84
LE+KI CI + I D AS L IR + K + L+S+++ Q F I
Sbjct: 131 LEQKIDSCILSEDEIA-DSASPALSSIRRQIKEQQASIKDRLNSIIRSTKYQKF----IQ 185
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+ ++T R R + +K HK +P G+ + S+SGAT F+EP VE NN +L E
Sbjct: 186 ESVVTMRGDRYVIPVKQEHKGDIP-GLVHDSSASGATLFIEPMAVVEANNSIKQLRVKEQ 244
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL+ L+ + + ++ M + +D FA+A A +CP+++
Sbjct: 245 TEIDRILAELSQDASLILPQLNANMSIMARLDFIFAKAKLAVDYKCICPVINDTG----- 299
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I I+ +HPLL +P K +PID +
Sbjct: 300 -KIIIKKGRHPLL---------------DPQKV--------------------IPIDFWI 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL +LM ++GL +PA + F+ I ADIGD QS
Sbjct: 324 GDKFSSLIVTGPNTGGKTVSLKTVGLFTLMVQSGLLIPANEGTEMSVFEKIYADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H+ IVDIL+ V+ +SL+L+DE+G+GTDP+EG ALA SIL+ L
Sbjct: 384 IEQSLSTFSSHMKNIVDILDGVNNKSLILLDELGAGTDPTEGAALAMSILESLHRMGATT 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTHY++L ENA+ EF +ETLRPTYR+L G G SNA I+K +G I
Sbjct: 444 LATTHYSELKVYAISTAGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISKRLGLTDDI 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+R+++ + ++ R ++ S+ + R + E + A S E L +++ED+
Sbjct: 504 IERSKEFL-----SQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLEDQK- 557
Query: 505 DLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
RR A K E ++ ++E L +K Q D +V + + ++ E+ +E
Sbjct: 558 ---RRLATQKESELRKAREEARRILTDSKHQADELVSEMKRLAKEQEEAEVRRQTEELRQ 614
Query: 561 AIA--------AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+ ++VE+ P N P G+ V + +L K T++ +P +
Sbjct: 615 RLNKSINKLDDSLVESIMPRQGLVKPPKN---LKP--GDTVLIVNLNQK-GTILAIPDKN 668
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS-GSAGSSNEEASYG 671
VQ G M++ V +N++ + +KQQ R G G S
Sbjct: 669 GEAQVQAGIMKINVHISNLKLVDE-------------QKQQIQRTGMGKIGVS------- 708
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+ Q +DLRGM + EA +D L A + +IHG GTG ++ + + L++
Sbjct: 709 -KAQNMSTDIDLRGMMLSEAVDVVDKYLDDASIAGMGEVTLIHGKGTGALRAGLHQHLKH 767
Query: 730 HPRVAKY 736
+P + +
Sbjct: 768 NPHIKSF 774
>gi|297617881|ref|YP_003703040.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145718|gb|ADI02475.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 779
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 221/724 (30%), Positives = 355/724 (49%), Gaps = 101/724 (13%)
Query: 44 ILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR + R E L ++ Q F + +IT+R+ R V +
Sbjct: 141 VRDTASPELKAIRNRIATAKNRVREYLQEFVRSSHYQKF----LQDAIITERQGRYVVPV 196
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL----SLLT 155
KA ++ + GI + S+SGAT F+EP+ V NN RL +E E IL SLL
Sbjct: 197 KAEYRSEV-KGIIHDESASGATVFVEPEAVVHVNNDIRRLEMAENREIEKILRRLTSLLE 255
Query: 156 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 215
+++ ER+++ L D +DL A+ A M+ V P L+ Q + +HP
Sbjct: 256 PVVSELERDLEILTD----LDLVLAKGRLALEMNAVAPRLNGQGVFVLRRA------RHP 305
Query: 216 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 275
LL KG VP+D+++ ++VITG
Sbjct: 306 LL--------------------------------GKG----AVPVDLELGKGFDILVITG 329
Query: 276 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 335
PNTGGKT ++KT+GL +LM+ +GL++PA + D + ADIGD QS+EQ+LSTFS H
Sbjct: 330 PNTGGKTVTLKTVGLLTLMAMSGLFVPAAEGTEIALVDAVYADIGDEQSIEQSLSTFSSH 389
Query: 336 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 395
++ I+DIL+ + +SLVL+DE+G+GTDP EG AL +IL L + AVVTTH ++L
Sbjct: 390 MTNIIDILKRATSQSLVLLDELGAGTDPVEGAALGRAILGELLAKGVKAVVTTHQSELKV 449
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
++ + ENA EF TL+PTYR+ G G SNAL IA+ +G D +I+++A++ V
Sbjct: 450 FAFQEAKVENACVEFDPITLQPTYRLSIGIPGHSNALEIAERLGLDHRIVEKARQFV--- 506
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
P+ +Q + + E RR+LES L + + R +++E + L R +
Sbjct: 507 -PQSEQD-LGRIINKVQEHRRRLESDIYEVEELRRRMEEERRALQEEKEKLRREREEIIR 564
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
K ++ + L K + DTV+ + + L++ E E E A +
Sbjct: 565 KTREEAESYLRKVKGEADTVLDEVKRSLKER---ETPPKWHELEKARHRVRGLRTERQVG 621
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
S+ + P G V ++S+G + ++E P D D VLVQ G +++ V ++++
Sbjct: 622 SLQAPEGAELNP--GAYVEIRSIGRR-GYILEGPNDKDEVLVQVGILKLTVPRDDV---- 674
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
P +++ R+ A + + + LDLRG+ ++A ++
Sbjct: 675 ------VLTTPP---EEEMARRKSHA--------FLEKAKRISPELDLRGLTADDAVFEV 717
Query: 696 -----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTV 748
D LA E + +IHG GTG +++ V E L PRV + + +G TV
Sbjct: 718 ERYIEDAYLAGLEK---VRIIHGKGTGALRQAVREWLAQCPRVTSFRDGEREEGGHGVTV 774
Query: 749 AYIK 752
A+ +
Sbjct: 775 AFFR 778
>gi|225181647|ref|ZP_03735087.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
gi|225167628|gb|EEG76439.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
Length = 775
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 225/750 (30%), Positives = 359/750 (47%), Gaps = 94/750 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L L + + L L E++ +D + + D+AS +L +R ++L +
Sbjct: 110 YPVLTGLTRQMDALPNLREELKNTLDEEGRL-RDQASAELLRLRRSINGGEQDLRERFDR 168
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + L+T R R+ V I+ ++ +P G+ + S+SGAT F+EP AVE
Sbjct: 169 FVRNPGNHKALQENLVTVRGDRLVVPIRQEYRSQVP-GVVHDQSASGATLFIEPLWAVEA 227
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L E E IL L+ + + + E+D A+A +
Sbjct: 228 NNRLTVLRREEEKERERILVRLSQWAGGEKETLVTSLTLYAELDFIIAKARLSLAQKASE 287
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P L+ + ++ S +HPLL G DV
Sbjct: 288 PKLNDRGYLHILSG------RHPLLTG------------------DV------------- 310
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VPI +++ R +VITGPNTGGKT ++KT+GL S+M+++GL++PA+ L F
Sbjct: 311 -----VPISLEMGENLRTLVITGPNTGGKTVTLKTVGLFSIMAQSGLHVPAEEGSELAVF 365
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
I ADIGD Q + Q+LSTFSGH+ I+DIL + SLVL+DE+G+GTDP+EG LA +
Sbjct: 366 PRIFADIGDEQDITQSLSTFSGHLKNIIDILGQLVPGSLVLLDEVGAGTDPTEGAGLAMA 425
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL+YL + + V TTHY+ L ENA+ EF + TLRPTY++L G G SNA
Sbjct: 426 ILEYLHNFGAVTVGTTHYSQLKTFAYVTQGMENASVEFDVATLRPTYQLLVGVPGVSNAF 485
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 492
IA+ +G D+ II+R ++ + +++ R E+ L+ +R+++E +R +
Sbjct: 486 AIAQRLGLDQDIIRRGKEFL-----SQEETRLEEVVADLVADRQRIEVVSRQVEDERQQS 540
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
L +I+ E +DL RR + + K + Q+ + AK + Q QLR +A +
Sbjct: 541 KALLLQIQQEKEDLARRKSEILEKARRDAQETVISAKRE----AQQLLKQLRKMAA-AAS 595
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLATVV 606
L +E E+A + + D DF+ + + S+ P G +V+V SLG + TVV
Sbjct: 596 PLQEEVENAAEKL---RKLDTDFTELQVSQSTSKPLSAEELTEGSEVYVNSLGQR-GTVV 651
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+ + VQ G MR+ V+ ++ + +K++ +P P + D
Sbjct: 652 K--AGQSQIQVQVGMMRITVEPADLSYVKPTKKE---SPRPTTMVSRRD----------- 695
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
LDLRG ++EA+ +++ L A + +IHG GTG ++ +
Sbjct: 696 ----------VPPELDLRGHTLDEAAMKVETYLDEAALAGLKEVRLIHGKGTGRLRAGLQ 745
Query: 725 EILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+ L+ HP VA P G TV IK
Sbjct: 746 DYLKGHPHVASMRMGQPAEGGTGATVIEIK 775
>gi|313896601|ref|ZP_07830150.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312974786|gb|EFR40252.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 761
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 223/721 (30%), Positives = 340/721 (47%), Gaps = 93/721 (12%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIK 100
D AS +L + E + R E L ++L A Q FQ + ++T R R + +K
Sbjct: 120 DDASPELRRVTREMLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVK 174
Query: 101 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 160
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA+
Sbjct: 175 QEYRAQFP-GVIHDRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIAR 233
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
+ + + E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 234 AADIVSENCTILAELDLIFARAGLSRNMEAYAPTFNRAGYVRLQRA------RHPLL--- 284
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P D VPIDI++ + V++ITGPNTGG
Sbjct: 285 -------------P-------------------KDRVVPIDIELGRDFSVLLITGPNTGG 312
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT SMKTLG+ +LM+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 313 KTVSMKTLGILALMAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIV 372
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
IL+ LVL+DE+G+GTDP EG ALA SI+++L R + TTHYA L
Sbjct: 373 RILQKAKSNDLVLLDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGR 432
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
NA+ EF TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ +
Sbjct: 433 QGVMNASVEFDTSTLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------E 486
Query: 461 QHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
H + E + L +E+R E ++ R A + + + R D+ R+ H +
Sbjct: 487 DHVRFETVVNELEQEKRAYETRQTELRIRAQKISAMEEQLRTERDKFIQAHRKLLHKARE 546
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES-ESAIAAIVEAHRPDDDF 575
E + +E A+ + ++ + Q D E I+E+ E A + P
Sbjct: 547 EANGIVRE---ARRSAEETIKKLKQQFDDHGVKERRKAIQEARERLTGAYMPQRHPSATK 603
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ P G+ VH+ L + TV+ V G + T VQ G +R VK + +
Sbjct: 604 VGQKIRAGEIEP--GDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKPDECTFVS 658
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K K + G G +++A+ RV + +D+RGM V E L
Sbjct: 659 RKK------------KNHRTEKVGFTGGISQKAA---RVHS---QIDVRGMTVSEVELTL 700
Query: 696 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYI 751
I A + S + +IHG GTG ++ + + L+ HP V + S G +VA +
Sbjct: 701 GKFIDDAVFAGLSKILIIHGKGTGALRLGIQDYLKRHPSVLSVAFADISEGGSGASVAEL 760
Query: 752 K 752
K
Sbjct: 761 K 761
>gi|126652668|ref|ZP_01724829.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
gi|126590517|gb|EAZ84635.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
Length = 788
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 231/747 (30%), Positives = 356/747 (47%), Gaps = 109/747 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L+ +I CID +LD AS L IR +E + L+SL++ A
Sbjct: 131 LTGLQHEINNCIDDNG-AVLDSASTTLRTIRQSLRSEEAKVRSKLESLIRGSNASKM--- 186
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +++ GI + SSSG T F+EP V+ NN RL
Sbjct: 187 -LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVHDQSSSGQTLFIEPDSIVQANNEIHRLKM 244
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE IL L+A + ++ L+ + +ID+ A+ + Q P ++
Sbjct: 245 KEQAEVERILLALSAMVQDVAPDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ---- 300
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I + +HPLL P+ D VP D
Sbjct: 301 --DGYIRLVRARHPLL----------------PI-------------------DTAVPND 323
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I+ + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +L F + ADIGD
Sbjct: 324 IEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSQLAVFKQLFADIGD 383
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ESLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 384 EQSIEQSLSTFSSHMVNIVDILQKFDDESLVLFDELGAGTDPQEGAALAISILDEVHGRG 443
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTYR+L G G SNA I+ +G
Sbjct: 444 ARVMATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSNAFEISSRLGLP 503
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II+RA+ R H + SL E RR+ E A + +L E L +E++D
Sbjct: 504 ETIIERAKGFTGTDR-----HEVESMIASLEETRRQSEDDAERSHALLLESESLRKELQD 558
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + D R L K ++ ++ + AK + + ++ + ++A + ++KE E
Sbjct: 559 KLQAYDERKEALDKKAKEKARKIVEEAKHEAEGIIAELREMRKNA-----DQVVKEHE-- 611
Query: 562 IAAIVEAHR------PDDDFSV----SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
++EA + P D+ V ++ + G++V V S G + T++E +
Sbjct: 612 ---LIEARKRLEEATPLDNNKVLKKAAQVKARAQNLVVGDEVKVLSYGQR-GTLLEKVSN 667
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V VQ G +++++ +++ I K P +R +AG N
Sbjct: 668 TEWV-VQMGILKMKISDSDLEYIKPEKE-------PIVR---------TAGVKNRNGHV- 709
Query: 672 PRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
K LDLRG R E+A +D AL R + +IHG+GTG +++ + L
Sbjct: 710 ------KLELDLRGERYEDAILRTEKYIDDALLANYGR--VSIIHGVGTGALRQGIQSYL 761
Query: 728 RNHPRVA--KYEQESPMNYGCTVAYIK 752
+N+ RV ++ + G TV +K
Sbjct: 762 KNNKRVKSFRFGEAGEGGLGVTVVELK 788
>gi|422701663|ref|ZP_16759503.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
gi|315170093|gb|EFU14110.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
Length = 788
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLNPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|29375971|ref|NP_815125.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227518669|ref|ZP_03948718.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227553200|ref|ZP_03983249.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|422715235|ref|ZP_16771958.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|422716036|ref|ZP_16772752.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|424676844|ref|ZP_18113715.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|424681338|ref|ZP_18118125.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|424683526|ref|ZP_18120276.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|424686569|ref|ZP_18123237.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|424690157|ref|ZP_18126692.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|424695180|ref|ZP_18131563.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|424697010|ref|ZP_18133351.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|424699605|ref|ZP_18135816.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|424703382|ref|ZP_18139516.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|424706073|ref|ZP_18142086.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|424717217|ref|ZP_18146515.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|424720798|ref|ZP_18149899.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|424724349|ref|ZP_18153298.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|424733935|ref|ZP_18162490.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|424743762|ref|ZP_18172067.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|424749463|ref|ZP_18177566.1| MutS2 family protein [Enterococcus faecalis ERV93]
gi|81722394|sp|Q835H3.1|MUTS2_ENTFA RecName: Full=MutS2 protein
gi|29343433|gb|AAO81195.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227073849|gb|EEI11812.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227177673|gb|EEI58645.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|315575541|gb|EFU87732.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|315580018|gb|EFU92209.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|402351045|gb|EJU85937.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|402356464|gb|EJU91198.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|402364524|gb|EJU98959.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|402364844|gb|EJU99275.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|402367423|gb|EJV01764.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|402368722|gb|EJV03029.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|402375534|gb|EJV09514.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|402377339|gb|EJV11250.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|402385387|gb|EJV18927.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|402386565|gb|EJV20071.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|402388716|gb|EJV22144.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|402390945|gb|EJV24265.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|402393269|gb|EJV26499.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|402395332|gb|EJV28441.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|402399891|gb|EJV32745.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|402407714|gb|EJV40219.1| MutS2 family protein [Enterococcus faecalis ERV93]
Length = 788
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|334340999|ref|YP_004545979.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
gi|334092353|gb|AEG60693.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
Length = 783
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 224/754 (29%), Positives = 378/754 (50%), Gaps = 95/754 (12%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA-ERKRNM--ENLDS 68
RY L EL + +LE+ I I I D + E L++ R +R +N E ++S
Sbjct: 111 RYPLLSELAEAMIHQPQLEKDILRAILPGGEIADDASPELLQIRRGLQRSQNRIRERMES 170
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+++ Q + + P+IT R R V +K ++ +P GI + S+SGAT F+EP
Sbjct: 171 IIRSSENQKY----LQDPIITIRNDRYVVPVKQEYRNQIP-GIVHDQSASGATLFVEPMP 225
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE NN RL +E E IL+ L+ +++ E+ +D + ++D A+A +++ +
Sbjct: 226 VVEANNEVRRLVAAEKQEIQKILAELSQGVSEISEELTITLDALGQLDFVMAKARYSRQL 285
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+ P + ++I +HPLL +
Sbjct: 286 NAWGP------KIVEGGVMDIRKGRHPLLPADA--------------------------- 312
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VP I + + R +VITGPNTGGKT ++KT+GL +LM+++GL++PA++
Sbjct: 313 ---------VPATISLGKDFRSLVITGPNTGGKTVTLKTVGLFTLMTQSGLHIPAESGTE 363
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+ F I ADIGD QS+EQ+LSTFS H++ +VDIL + SLVL+DE+G+GTDP+EG A
Sbjct: 364 MGVFSKIYADIGDEQSIEQSLSTFSSHMTNLVDILAGAGQGSLVLLDELGAGTDPTEGAA 423
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA +IL+ L R + TTHY++L ENA+ EF +ETLRPTYR+L G G
Sbjct: 424 LARAILETLFQRGVCTIATTHYSELKNYAYTTPGVENASVEFDIETLRPTYRLLIGRPGR 483
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I+ +G +++QRA++ + +Q ++L L + ++ E + A +L
Sbjct: 484 SNAFEISARLGLSPEVVQRARQFL-----TTEQVEVADLINKLEQTQQAAEREREEAETL 538
Query: 489 HAE---IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
+ + + YR++E + ++ + L K ++ + + A+++ D V++ ++L +
Sbjct: 539 RRDSEKLKERYRQLEQQLRE---KRESLLEKAQEEAARLVRNARLEADEAVKELRSKLAE 595
Query: 546 ASADEINSLIKESESAIAAI---VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
+A + S I+++ + + + V A P+ V P G+QV + K
Sbjct: 596 ENAKDRESAIQQARNKLQRVTSKVAAKVPER--VVPGEIPRQVKP--GQQVFLPKYNQK- 650
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
A V+ V GD+ V VQ G M++ V P LR+ E++ ++G
Sbjct: 651 AYVLSVSGDN--VQVQVGIMKMFV------------------PLKELRRVAEEKV--TSG 688
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 720
+ + + + SLDLRGM +EA +++ L A + + +IHG GTG ++
Sbjct: 689 QTQVGKVFMEKANSIGTSLDLRGMTGDEALLEIEKYLDDALLAGLNSVILIHGKGTGALR 748
Query: 721 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
V L++HPRV + + + G TV +K
Sbjct: 749 AAVHRELKSHPRVKSFRLGEAGEGSSGATVVELK 782
>gi|229550105|ref|ZP_04438830.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255972883|ref|ZP_05423469.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257422707|ref|ZP_05599697.1| MutS2 family protein [Enterococcus faecalis X98]
gi|312952408|ref|ZP_07771283.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|384518505|ref|YP_005705810.1| mutS2 protein [Enterococcus faecalis 62]
gi|422693114|ref|ZP_16751129.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|422706763|ref|ZP_16764461.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|422726956|ref|ZP_16783399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|229304809|gb|EEN70805.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255963901|gb|EET96377.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257164531|gb|EEU94491.1| MutS2 family protein [Enterococcus faecalis X98]
gi|310629792|gb|EFQ13075.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|315152573|gb|EFT96589.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|315155852|gb|EFT99868.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|315157981|gb|EFU01998.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|323480638|gb|ADX80077.1| mutS2 protein [Enterococcus faecalis 62]
Length = 788
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKGNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|375088406|ref|ZP_09734746.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
gi|374562444|gb|EHR33774.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
Length = 790
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 222/741 (29%), Positives = 365/741 (49%), Gaps = 101/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L LE KI ID + + D AS L IR K+ +++ L ++ + Q+ +
Sbjct: 132 LQSLERKIREVID-ESGTVSDDASPKLRGIRTGIKQMEQSVRDKLDRIV-RGKQSRYLTD 189
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
+IT R +R + +KA + + G+ + SS+G T F+EP+ + NN + + E A
Sbjct: 190 SIITIRNNRYVIPVKADSRAVF-GGVVHDQSSTGQTLFIEPQSVLNLNNKLKQYRSEEQA 248
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ IA EI+ + R+++ D A+A +A+ +D P +S +
Sbjct: 249 EIDRILAELSELIAPHTNEIEANLRRLVQFDFIQAKATYAKQLDASRP------EISENL 302
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
S+++ G +HPL+ +D V DI +
Sbjct: 303 SVSLIGARHPLIK-----------------------------------ADEVVANDIIIG 327
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ + +V+TGPNTGGKT +KTLGL LM +AGL++PA+ + F ADIGD QS+
Sbjct: 328 EDYKAIVVTGPNTGGKTVILKTLGLMQLMGQAGLHIPAEQGSVIGLFTKWFADIGDEQSI 387
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL + +SL+L+DE+G+GTDP EG ALA ++L Y+ + +
Sbjct: 388 EQSLSTFSSHMTNIVSILNQLDEKSLILLDELGAGTDPQEGAALAIAMLDYIASQGSTVM 447
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
+T+HY +L + NA+ EF +++L PTYR+L G G SNA IA+ +G II
Sbjct: 448 ITSHYPELKVYGYNRPQTINASMEFDVDSLSPTYRLLLGVPGRSNAFEIARRLGLSEHII 507
Query: 446 QRAQKL-------VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 498
+Q+L V+ + + +Q RK Q+ ++L+ + A LH E+ D Y
Sbjct: 508 ASSQQLMSGESQSVDNMIGDLEQKRKEAEKQN-----KQLKQELYQATQLHNELKDFYAS 562
Query: 499 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKE 557
E L+++A +E ++ QE A+ + D ++++ + QL A +KE
Sbjct: 563 YEKHKDHLEQKA----QEEANEIIQE---AQKEADRIIEELRHRQLEGEQAPN----VKE 611
Query: 558 SE--SAIAAIVEAHRPDDDF---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
E A + + H + V + G++VHV S D+ +VE D+
Sbjct: 612 HEFIDAKSRLSNLHYEQEHLKQNKVLQKEKQKKELAAGDEVHVLSF-DQPGILVE-QTDE 669
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+VQ G +++++ ++ ++ + +K K A P +R +
Sbjct: 670 KEWVVQMGMLKMKIDESELK-VKETKEK-AKQPKTTVRASKS------------------ 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+ + +DLRG RV EA L+ I A + + +IHGMGTG V++ V + LR H
Sbjct: 710 ---SIRTEVDLRGQRVHEAVKSLEQYIDQALLANYHQVTIIHGMGTGAVRKAVHKRLREH 766
Query: 731 PRVAKYEQESPMNYGCTVAYI 751
PRVA + ++P N G A I
Sbjct: 767 PRVASF-NDAPANQGGNGATI 786
>gi|284048620|ref|YP_003398959.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
gi|283952841|gb|ADB47644.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
Length = 790
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 218/727 (29%), Positives = 355/727 (48%), Gaps = 97/727 (13%)
Query: 44 ILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS L+ +R A + R + L+SLL Q + L+T R R + I
Sbjct: 143 IKDNASVKLQGLRTGILAAKNRVKDKLNSLLHDPNNQKY----FQDALVTMREDRYVIPI 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ P G+ + S+SGAT F+EP V NN + E AE IL LT +
Sbjct: 199 KQEYRLNFP-GVVHDQSASGATLFVEPMAVVNLNNDIKKYRLEEQAEVERILRTLTGHVG 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
I +D ++DL A+A AQ + P++ Q + +HPLL
Sbjct: 258 SEAENILSSLDIAAQVDLIGAKAALAQKLHCCRPMMILQQRLRITQG------RHPLL-- 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D E VP+DI + + ++ITGPNTG
Sbjct: 310 ------------------DQEKV---------------VPLDINLGDDFTTLLITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+G+ +LM++AG+++PA+ LP F + ADIGD QS+EQ+LSTFSGH+ +
Sbjct: 337 GKTVALKTVGVFALMAQAGMFVPAR-EAILPVFGGVYADIGDEQSIEQSLSTFSGHMKNM 395
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ IL+ V LVL+DE+ GTDP+EG ALA ++++YL + L ++TTHY++L +
Sbjct: 396 ISILDEVREGDLVLVDEVCVGTDPTEGAALAMAMIEYLYKKKVLTIMTTHYSELKTFAYE 455
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF ETLRPTY++L G G SNA I+K +G + I+ A+ +
Sbjct: 456 HEGMENASVEFDPETLRPTYKLLMGVPGSSNAFYISKRLGLPQGILDEARTFIG------ 509
Query: 460 QQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
+ H E + Q+L ERR+ ES+ ++L E L E+ + +DL++ + K
Sbjct: 510 EGHSNMERVLQNLEGERREYESRKDEISALQREAEYLKNELTRQKQDLEKSRNAILRKAR 569
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP--DDDFS 576
+Q + A+ + +++++ A+ D + S + + E R + +FS
Sbjct: 570 EQADELYRNARRESTSILKELR-----ANQDMVES------RKVEQLAELSRKVLNKNFS 618
Query: 577 VSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
+ +S G++V+VK +G T+V + G + TV R+ + K N
Sbjct: 619 IDGKPMPEGQGLTSGNAAVGKKVYVKKIGQS-GTIVALNGKEVTV-------RIGIMKMN 670
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
++ K A P+ + ++S S G + + + Q + +D+RG V+E
Sbjct: 671 LKLKDCLLLKEA--PSQPRSTHRTLKKSTSQGHN----LFVKKAQDATVQIDVRGKTVDE 724
Query: 691 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YG 745
A +D A+ A ++HG GTG++++ +LE L HP V K E +P+N +G
Sbjct: 725 AIPYVDKAIDDALLAGMDRFRLVHGKGTGMLRKGLLEYLDQHPNVLKTEM-APLNEGGFG 783
Query: 746 CTVAYIK 752
T+ ++K
Sbjct: 784 ATIVWVK 790
>gi|153940847|ref|YP_001392400.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum F str. Langeland]
gi|384463373|ref|YP_005675968.1| MutS2 family protein [Clostridium botulinum F str. 230613]
gi|189030427|sp|A7GHZ0.1|MUTS2_CLOBL RecName: Full=MutS2 protein
gi|152936743|gb|ABS42241.1| MutS2 family protein [Clostridium botulinum F str. Langeland]
gi|295320390|gb|ADG00768.1| MutS2 family protein [Clostridium botulinum F str. 230613]
Length = 788
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 213/699 (30%), Positives = 354/699 (50%), Gaps = 79/699 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I DRAS L IR K + ++SL++ ++ + + + T R R + +
Sbjct: 145 IADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPV 198
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA HK +P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I
Sbjct: 199 KAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKIN 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +K + V E+D FA+A FA + CP ++++ V IEG +HPL
Sbjct: 258 ANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTINNEGIVDI-----IEG-RHPL--- 308
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
++ E+ VPI +K+ E ++ITGPNTG
Sbjct: 309 -------------------IDRREV-------------VPISVKLGEEFTSLMITGPNTG 336
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 337 GKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNI 396
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+I++ SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L +
Sbjct: 397 VEIMDKADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALR 456
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A++ +
Sbjct: 457 KEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SN 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ R EL ++L E+ K + AR A +L E ++ E++ + L + + +
Sbjct: 512 ENIRFEELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARR 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + AK + D +++D R + + ++E + +++ + +V +
Sbjct: 572 EAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K
Sbjct: 632 GEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKG 686
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
N + S+ + ++ ++S+DLRGM EEA + +D L
Sbjct: 687 SNF---------------NSSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + ++HG GTGV+++ ++++L+ H V ++
Sbjct: 732 DEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKRH 770
>gi|256958895|ref|ZP_05563066.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|257078926|ref|ZP_05573287.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294780084|ref|ZP_06745460.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|307271106|ref|ZP_07552389.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|397699794|ref|YP_006537582.1| mutS2 protein [Enterococcus faecalis D32]
gi|422708383|ref|ZP_16765911.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|422718757|ref|ZP_16775408.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|256949391|gb|EEU66023.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|256986956|gb|EEU74258.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294452836|gb|EFG21262.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|306512604|gb|EFM81253.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|315033806|gb|EFT45738.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|315036891|gb|EFT48823.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|397336433|gb|AFO44105.1| mutS2 protein [Enterococcus faecalis D32]
Length = 788
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNVF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKGNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|407477852|ref|YP_006791729.1| MutS2 protein [Exiguobacterium antarcticum B7]
gi|407061931|gb|AFS71121.1| MutS2 protein [Exiguobacterium antarcticum B7]
Length = 788
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 230/735 (31%), Positives = 355/735 (48%), Gaps = 119/735 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQA 80
L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ + + A
Sbjct: 131 LVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRSKSKMLSDA 188
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--MEVR 138
++T R R CV +K ++ GI + S+SGAT F+EP+ V NN E R
Sbjct: 189 ------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQEAR 241
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L E AE IL+ L+A + ++ +D + E+D A+A + + V P L+
Sbjct: 242 LK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPKLNEN 299
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
H+ + +HP + P D V
Sbjct: 300 RHIVLKEA------RHPFI----------------P-------------------DDEVV 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
PI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD I AD
Sbjct: 319 PITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAIYAD 378
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +IL ++
Sbjct: 379 IGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILDEVK 438
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
R TTHY++L NA+ EF +E+L PTYR+L G G SNA I+K +
Sbjct: 439 RRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEISKRL 498
Query: 439 GFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
G D ++I Q + ++ RL E + R L + L++E+++L +
Sbjct: 499 GLDDRVISAARDQVGSDAQSVETMIGRL--EEAKQRAETLERELLQEQKRLVQEREEFEQ 556
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
AEI EI +A++ RA KE + V + L +LRDA
Sbjct: 557 EQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KELRDAG 601
Query: 548 ADEINSLIKESESAIAAIVEAHRPD-DDFSVSETNT-SSFTPQF--GEQVHVKSLGDKLA 603
A + + LI+ + +E +P D +++ S+ TP F GE+V V + K
Sbjct: 602 AVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKSNQTPVFAKGEEVKVTTFNQKGY 656
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
+ + + T VQ G M+V VK +++ + K A + +K R G++ +
Sbjct: 657 IINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK------SASKTKK----RAGGTSVT 704
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
AS LDLRG+RVEE +LD + A + + VIHG+GTG +++
Sbjct: 705 KQSAAS---------AELDLRGVRVEEGLAKLDRFMDQALLSNYEQIRVIHGLGTGAMRQ 755
Query: 722 RVLEILRNHPRVAKY 736
V E LR + V +
Sbjct: 756 GVQEYLRGNRHVKTH 770
>gi|314936676|ref|ZP_07844023.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
gi|313655295|gb|EFS19040.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
Length = 783
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 229/767 (29%), Positives = 363/767 (47%), Gaps = 107/767 (13%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 58
+LE++ G + +Y L E + LT+L ++I C + D AS +L+ IR++
Sbjct: 109 LLEEDEGVV--KYPILNERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKIS 164
Query: 59 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 116
+R +NLD ++K A Q + +IT R R + +KA ++ GI + S
Sbjct: 165 STTQRIRQNLDRIVKSQANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQS 219
Query: 117 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 176
+SG T ++EP VE NN RL N E E IL+ LT +A + + +ID
Sbjct: 220 ASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGLVAADDNNCLVAESVMGQID 279
Query: 177 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 236
A+A +A+ + G P + V ++ HPLL
Sbjct: 280 FLTAKARYARSIKGTKPTFYKERTVYLPNAY------HPLL------------------- 314
Query: 237 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
N + V + + I D V+ITGPNTGGKT ++KTLGL +M++
Sbjct: 315 ----NKDTVVANTIEFIDDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQ 358
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
+GL +P + +L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE
Sbjct: 359 SGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDE 418
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
+G+GTDPSEG ALA SIL ++RD L + TTHY +L NA+ EF + TL
Sbjct: 419 LGAGTDPSEGAALAMSILDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLS 478
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 476
PTY++L G G SNA +I+K +G II +A+ ++ E S++E
Sbjct: 479 PTYKLLMGVPGRSNAFDISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE--- 526
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
LE ++ E+ L RE DL+R+ K E + + + + A +I +
Sbjct: 527 SLEKNSKRVDEQRIELEKLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSAT 586
Query: 537 QDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF----- 589
++ ++ L+D D+ + +KE E I + +D + + ++
Sbjct: 587 KEADDILKDLREMRDKKGADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHA 642
Query: 590 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 649
G++V V S G K V+E+ G+ + + VQ G +++++ PI + ++ P
Sbjct: 643 GDEVKVLSYGQK-GEVLELSGEHEAI-VQMGIIKMKL------PIEDLEKTKKKKEKPTK 694
Query: 650 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSV 707
+++R QT K LDLRG R EEA LD I A +
Sbjct: 695 MVTRQNR------------------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQ 736
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+++IHG GTG +++ V L+ H V + P +G TVA +K
Sbjct: 737 VYIIHGKGTGALQKAVQNHLKKHKSVQSFRGGIPSEGGFGVTVAELK 783
>gi|373107351|ref|ZP_09521650.1| MutS2 family protein [Stomatobaculum longum]
gi|371651181|gb|EHO16615.1| MutS2 family protein [Stomatobaculum longum]
Length = 788
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 218/700 (31%), Positives = 346/700 (49%), Gaps = 77/700 (11%)
Query: 43 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 102
++ D AS +L IR + K E + S L++ + + ++T R C+ +K+
Sbjct: 144 LVADTASAELSRIRRQMKTADERMHSALQEEINR--HKSYLMDTIVTMRNGSYCLAVKSE 201
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
+K LP G+ + SS+G+T F+EP AV NN L +E E T IL+ L+A +
Sbjct: 202 YKSKLP-GVVHDQSSTGSTVFIEPLVAVRLNNEYRELVIAEQQEITKILAALSALLTPCT 260
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
+ + +D FA+A A M P+ +++ V I+ +HPL+
Sbjct: 261 AALLANQKILAALDFVFAKARLASSMQASKPLFNTERIV------EIKDGRHPLI----- 309
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
P D VPI I++ + +++ITGPNTGGKT
Sbjct: 310 -----------P-------------------RDKVVPISIRIGEDFTLLIITGPNTGGKT 339
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
S+KT+GL +LM +AGL++PA RL F + ADIGD QS+EQ+LSTFSGH+ +V+I
Sbjct: 340 VSLKTMGLFTLMGQAGLHIPAFQGSRLAVFRDVFADIGDEQSIEQSLSTFSGHMKNVVEI 399
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
L ++L L DE+G+GTDP+EG ALA +IL +L++ V TTHY++L
Sbjct: 400 LASADSDALCLFDELGAGTDPTEGAALAIAILSFLQNIGARTVATTHYSELKVYALSTKG 459
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 462
ENA+ EF + TLRPTYR+L G G SNA I+K +G II+ A+ + E+
Sbjct: 460 VENASCEFDVATLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEEAKTHI-----EQNDA 514
Query: 463 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 522
+L L +RR +E++ + + EI +L E ++LD R + K + +
Sbjct: 515 AFEDLLTRLEADRRTIEAERKEILAYRTEIEELKTRHEKADQNLDERKERILEKARAEAE 574
Query: 523 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 582
+ L AK D ++ N+L SAD + L++E E + E + + + +
Sbjct: 575 RILAEAKESADQSIRRI-NRL---SAD--SGLLRELEKERTGLRERLKAVEKTAPKKEAV 628
Query: 583 SSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ P G+ V V S+ D A V +P ++ + V+ G +R +V +++ I
Sbjct: 629 KAAKPAVLHIGDSVRVLSM-DHDAIVSTLPDKNNRLFVRMGVLRTQVSADDVVLI----E 683
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
+ AA+ K + SG+A + + + P + +L G V+EA +LD L
Sbjct: 684 EEAASA-----KGAKRGYSGAAPTFGKASHISPEI-------NLIGKTVDEALGELDKYL 731
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
A + + VIHG GTG +K+ VL L+ P V K+E
Sbjct: 732 DDALLAHLNSVRVIHGRGTGALKKGVLAWLKKQPYVKKFE 771
>gi|422728993|ref|ZP_16785399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
gi|315150623|gb|EFT94639.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
Length = 788
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEVSQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|172058180|ref|YP_001814640.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
gi|229486374|sp|B1YJY5.1|MUTS2_EXIS2 RecName: Full=MutS2 protein
gi|171990701|gb|ACB61623.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
Length = 788
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 228/736 (30%), Positives = 353/736 (47%), Gaps = 121/736 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQA 80
L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ + + A
Sbjct: 131 LVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRNKSKMLSDA 188
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--MEVR 138
++T R R CV +K ++ GI + S+SGAT F+EP+ V NN E R
Sbjct: 189 ------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQEAR 241
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L E AE IL+ L+A + ++ +D + E+D A+A + + V P L+
Sbjct: 242 LK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPRLNEN 299
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
H+ + +HP + P D V
Sbjct: 300 RHIVLKEA------RHPFI----------------P-------------------DDEVV 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
PI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD I AD
Sbjct: 319 PITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAIYAD 378
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +IL ++
Sbjct: 379 IGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILDEVK 438
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
R TTHY++L NA+ EF +E+L PTYR+L G G SNA I+K +
Sbjct: 439 RRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEISKRL 498
Query: 439 GFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
G + ++I Q + ++ RL E + R L + L++E+++L +
Sbjct: 499 GLEDRVIDAARDQVGTDAQSVETMIGRL--EEAKQRAESLERELLQEQQRLVEEREEFER 556
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
AEI EI +A++ RA KE + V + L +LRDA
Sbjct: 557 EQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KELRDAG 601
Query: 548 ADEINSLIKESESAIAAIVEAHRP---DDDFSVSETNTSSFTPQF--GEQVHVKSLGDKL 602
A + + LI+ + +E +P D + + T+ P F GE+V V + K
Sbjct: 602 AVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKTNQ-APVFAKGEEVKVTTFNQKG 655
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
+ + + T VQ G M+V VK +++ + K A + +K R G++
Sbjct: 656 YIINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK------SASKTKK----RSGGTSI 703
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
+ AS LDLRG+RVEE +LD + A + + VIHG+GTG ++
Sbjct: 704 TKQSAAS---------AELDLRGVRVEEGLAKLDRFMDQALLSNYEQIRVIHGLGTGAMR 754
Query: 721 ERVLEILRNHPRVAKY 736
+ V E LR + V +
Sbjct: 755 QGVQEYLRGNRHVKTH 770
>gi|376260578|ref|YP_005147298.1| MutS2 family protein [Clostridium sp. BNL1100]
gi|373944572|gb|AEY65493.1| MutS2 family protein [Clostridium sp. BNL1100]
Length = 792
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 223/727 (30%), Positives = 352/727 (48%), Gaps = 102/727 (14%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGID 84
LE+KI CI + I D AS L IR + K + L+S+++ Q F I
Sbjct: 131 LEQKIENCILSEDEIA-DNASPALSSIRRQIKEQQASIKDKLNSIIRSTKYQKF----IQ 185
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+ ++T R R + +K HK +P G+ + S+SGAT F+EP VE NN +L E
Sbjct: 186 ESVVTMRGDRYVIPVKQEHKGDIP-GLVHDSSASGATLFIEPMAVVEANNSIKQLRVKEQ 244
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL+ L+ + + ++ M + +D FA+A A +CP ++
Sbjct: 245 TEIDRILAELSQDASLILPQLNANMSIMARLDFIFAKAKLAVDYKCICP------RINDT 298
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I I+ +HPLL +P K +PID +
Sbjct: 299 GKIIIKKGRHPLL---------------DPQKV--------------------IPIDFWI 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL +LM ++GL +PA + F+ I ADIGD QS
Sbjct: 324 GEKFSSLIVTGPNTGGKTVSLKTVGLFTLMVQSGLLVPANEGTEMSVFEKIYADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H+ IVDIL V+ +SL+L+DE+G+GTDP+EG ALA SIL+ L
Sbjct: 384 IEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILESLHQMGATT 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTHY++L T ENA+ EF +ETLRPTYR+L G G SNA I+K +G I
Sbjct: 444 LATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISKRLGLTDDI 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+R+++ + ++ R ++ S+ + R + E + A S E L +++ED+
Sbjct: 504 IERSKEFL-----SQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLEDQK- 557
Query: 505 DLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
RR A K E ++ ++E L +K Q D +V + + ++ E+ +E
Sbjct: 558 ---RRLAAQKESELRKAREEARRILTDSKHQADELVSEMKRLAKEQEEAEVRRQTEELRQ 614
Query: 561 AIA--------AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+ ++VE+ P N P G+ V + +L K T++ +P +
Sbjct: 615 RLNKSINNLDDSLVESIMPRQGLVKPPKN---LKP--GDTVLIVNLNQK-GTILSLPDKN 668
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS-GSAGSSNEEASYG 671
VQ G M++ V +N++ + +KQQ R G G S
Sbjct: 669 GEAQVQAGIMKINVHISNLKLVDE-------------QKQQIQRTGMGKIGVS------- 708
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+ Q +DLRGM + EA +D L A + +IHG GTG ++ + + L++
Sbjct: 709 -KAQNMSTEIDLRGMMLSEAVDVVDKYLDDASIAGMGEVTLIHGKGTGALRAGLHQHLKH 767
Query: 730 HPRVAKY 736
+P + +
Sbjct: 768 NPHIKSF 774
>gi|257870172|ref|ZP_05649825.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
gi|257804336|gb|EEV33158.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
Length = 787
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 228/730 (31%), Positives = 360/730 (49%), Gaps = 114/730 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L +IR +R+ E LDSL++ A+ + ++T R R + +
Sbjct: 146 LTDEASPELRVIRQNIRRSERTIRETLDSLVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + SSSG T F+EPK V+ NN RL +IAE T I L+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN---RLRQHQIAERTEIERILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + + + P +++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVPAINTDNHVVFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGEDYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M ++GL + ++ F I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVD+L+ V SLVL DE+G+GTDP EG ALA +IL L R + TTHY +L
Sbjct: 396 TTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAILDELGARSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+K +G D +II++A+++++
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDTQIIEQAKQIMDGES 515
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--------DR 508
Q L E LE++ + + + E+ E E K+L +
Sbjct: 516 ------------QDLNEMIADLENRRKMTETEYLEMRHYVEEAERLQKELKQAYNFFFEE 563
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAI 565
R A L AK ++ Q + AK + + ++ D N QL S +KE E +A +
Sbjct: 564 REAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLSSG-----QSHVKEHELIAARTKL 617
Query: 566 VEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+ H+ + V + ++ T + G++V V S G + T+++ G VQ G ++
Sbjct: 618 SDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQR-GTLIKKMGQSQW-QVQLGILK 675
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ + +++++P A P +E Q + E+S+ P N LDL
Sbjct: 676 MTLPESDLQP---------AAPV------KEPVQRVVHTVRSAESSHVP------NQLDL 714
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG R EEA +++D L + ++HG GTG +++ + E L+NH V +E +P
Sbjct: 715 RGKRYEEALNEVDQYLDATILAGYPQVTIVHGKGTGALRQGITEYLKNHRSVKSFE-FAP 773
Query: 742 MNYGCTVAYI 751
N G A I
Sbjct: 774 ANQGGNGATI 783
>gi|336428866|ref|ZP_08608841.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336004409|gb|EGN34474.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 792
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 322/657 (49%), Gaps = 81/657 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
LIT R R C+ +KA ++ +P G+ + SS+G+T F+EP V NN L E E
Sbjct: 187 LITSRNGRYCIPVKAEYRSQVP-GMIHDQSSTGSTLFVEPAAVVNLNNQMRELEIKEQEE 245
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+L+ L+A++A+ +I + +D FA+A A + PI + + H+
Sbjct: 246 IEKVLASLSAQVAEHTEDIAENQRILTLLDFIFAKASLALEQNATEPIFN-EDHI----- 299
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+NI G +HPLL D + + VPIDI++
Sbjct: 300 LNIRGARHPLL--------------------DKKKT---------------VPIDIRLGR 324
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ +++ITGPNTGGKT S+KT GL LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 DYDLLIITGPNTGGKTVSLKTTGLFCLMGQAGLHIPALDRSELSIFREVYADIGDEQSIE 384
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL+ +SL L DE+G+GTDP+EG ALA +IL +L DR +
Sbjct: 385 QSLSTFSSHMTSIVSILKNADADSLCLFDELGAGTDPTEGAALAIAILNFLHDRGIRTMA 444
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L + ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTSFVENACCEFDVESLRPTYRLLIGIPGKSNAFAISSRLGLSDDIIN 504
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A R + + +L L + R +E + AS E+ L +++E + + +
Sbjct: 505 SA-----RTQISAEAKSFEDLLTDLEQSRVTIEKEQLEIASYKREVEALKKQLEAKQEKI 559
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI-----NSLIKESESA 561
D+ + + +Q ++ L AK D ++ F+ AS ++ N K S+
Sbjct: 560 DQAKERILREANEQAREILQDAKNTADETIRAFQKAGPGASMKDLEKARENLRGKISDKN 619
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
V+ +P +++ + GE V + S+G K TV +P + + VQ G
Sbjct: 620 EKLAVKNQQP------AQSGVKPSQLKLGESVRIVSMGLK-GTVSTMPDNKGNLFVQCGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+R + NIR + + K+A+ A ++G GS S + + N
Sbjct: 673 IRT---QTNIRDLVLIQEKDASATA----------KAGRTGSGKIRMSKSLSISSEIN-- 717
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L G V+EA LD L A S + ++HG GTG ++ V +NH R KY
Sbjct: 718 -LLGKTVDEAMSVLDKYLDDAYLAHLSTVRIVHGKGTGALRNAV----QNHLRKVKY 769
>gi|257419214|ref|ZP_05596208.1| MutS2 protein [Enterococcus faecalis T11]
gi|257161042|gb|EEU91002.1| MutS2 protein [Enterococcus faecalis T11]
Length = 788
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 233/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQV 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|336431523|ref|ZP_08611372.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336013825|gb|EGN43697.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 791
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 209/660 (31%), Positives = 323/660 (48%), Gaps = 81/660 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ E A+ EI+ + ++D FAR A M+ PIL++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYRILTDLDFIFARGALALSMNASRPILNT------DG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A + R Q +L L +R +E + A+ EI L + + + +
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 559
++ + + A+ ++ L AK D +++F ++ SA E+ K E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ ++ ++ +P ++ ++ + GE V V S+ + T+ +P V VQ
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +R +V +++ I ANP AP+ K R S ++ S P +
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPKSFK----RTSKGKLKMSKSLSVSPEI---- 716
Query: 679 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A S + V+HG GTG +++ + E LR V Y
Sbjct: 717 ---NLLGKTVDEAVSELDKYLDDALLSHLSTVRVVHGKGTGALRKGIHEFLRRQKHVKSY 773
>gi|220928895|ref|YP_002505804.1| MutS2 family protein [Clostridium cellulolyticum H10]
gi|254766596|sp|B8I1Z8.1|MUTS2_CLOCE RecName: Full=MutS2 protein
gi|219999223|gb|ACL75824.1| MutS2 family protein [Clostridium cellulolyticum H10]
Length = 792
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 222/727 (30%), Positives = 353/727 (48%), Gaps = 102/727 (14%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGID 84
LE+KI CI + I D AS L IR + K + L+S+++ Q + I
Sbjct: 131 LEQKIDNCILSEDEIA-DNASPALSSIRRQIKEQQASIKDKLNSIIRSTKYQKY----IQ 185
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+ ++T R R + +K HK +P G+ + S+SGAT F+EP VE NN +L E
Sbjct: 186 ESVVTMRGDRYVIPVKQEHKGDIP-GLVHDSSASGATLFIEPMAVVEANNSIKQLRVKEQ 244
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL+ L+ + + ++ M + +D FA++ A + +CP ++
Sbjct: 245 TEIDRILAELSQDASLVLPQLNANMSIMARLDFIFAKSKLAIDYNCICP------KINDT 298
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I I+ +HPLL +P VPID +
Sbjct: 299 GKIIIKKGRHPLL---------------DP--------------------KIVVPIDFWI 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT S+KT+GL +LM ++GL +PA + + F+ I ADIGD QS
Sbjct: 324 GEKFSSLIVTGPNTGGKTVSLKTVGLFTLMMQSGLLVPANDGTEMSVFEKIYADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H+ IVDIL V+ +SL+L+DE+G+GTDP+EG ALA SIL+ L
Sbjct: 384 IEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILECLHQMGATT 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTHY++L T ENA+ EF +ETLRPTYR+L G G SNA I+K +G I
Sbjct: 444 LATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISKRLGLTDDI 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+R+++ + ++ R ++ S+ + R + E + A S E L +++ED+
Sbjct: 504 IERSKEFL-----SQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLEDQK- 557
Query: 505 DLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
RR A K E ++ ++E L +K Q D +V + + ++ E+ +E
Sbjct: 558 ---RRLAAQKESELRKAREEARRILTDSKRQADELVSEMKRLAKEQEEAEVRRQTEELRQ 614
Query: 561 AIA--------AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
+ ++VE+ P N P G+ V + +L K TV+ +P +
Sbjct: 615 KLNKSINNLDDSLVESIMPRQGLVKPPKN---LKP--GDTVLIVNLNQK-GTVLTLPDKN 668
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS-GSAGSSNEEASYG 671
VQ G M++ V +N++ + +KQQ R G G S
Sbjct: 669 GEAQVQAGIMKINVHISNLKLVDE-------------QKQQIQRTGMGKIGVS------- 708
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+ Q +DLRGM + EA +D L A + +IHG GTG ++ + + L++
Sbjct: 709 -KAQNMSTEIDLRGMMLSEAVDVVDKYLDDASIAGMGGVTLIHGKGTGALRAGLHQHLKH 767
Query: 730 HPRVAKY 736
+P + +
Sbjct: 768 NPHIKSF 774
>gi|418576544|ref|ZP_13140678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324965|gb|EHY92109.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 782
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 219/735 (29%), Positives = 358/735 (48%), Gaps = 115/735 (15%)
Query: 39 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 94
C + D AS +L+ IR++ +R +NLD ++K A Q + ++T R R
Sbjct: 142 CDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQANQ----KKLSDAIVTVRNER 197
Query: 95 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +KA ++ +GI + S+SG T ++EP VE +N RL N E E ILS L
Sbjct: 198 NVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQISRLKNDEAIERERILSAL 256
Query: 155 TAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 213
T E+A+ E + + + ++ +ID A+A +A + G P + D ++ +
Sbjct: 257 TVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTKPQFTK------DRTVYLPKAF 309
Query: 214 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 273
HPLL ++ +N+ D+E V+I
Sbjct: 310 HPLLDKQTV------VANTIEFAQDIE-----------------------------TVII 334
Query: 274 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 333
TGPNTGGKT ++KTLGL +M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS
Sbjct: 335 TGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFS 394
Query: 334 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
H+ IV+IL ++ SL+L DE+G+GTDPSEG ALA SIL ++ + L + TTHY +L
Sbjct: 395 SHMKNIVEILHDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLVMATTHYPEL 454
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
NA+ EF + TL PTY++L G G SNA +I+K +G + K+IQ+A+ ++
Sbjct: 455 KAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQKAKSMI- 513
Query: 454 RLRPERQQHRKSELYQSLM-------EERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
+ + +E+ SL E+R +L+ R A H + Y + ++ K L
Sbjct: 514 ----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNHEKQL 569
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
A K K Q+V+ A + D ++++ +LRD + +KE E I
Sbjct: 570 MNEA---KEKANQRVKS----ATKEADDILKELR-ELRDQKGAD----VKEHE----LID 613
Query: 567 EAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ + DD + + ++ G++V V + G K V+E+ D + +VQ G
Sbjct: 614 KKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQK-GEVLELI-DHNEAVVQMGI 671
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+++++ P+ + ++ P ++E+RQS K L
Sbjct: 672 IKMKL------PLEDLEKTKKTKSEPTKMIKRENRQS------------------IKMEL 707
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
DLRG R +EA +D L A + +++IHG GTG +++ V L+ H VA Y
Sbjct: 708 DLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQNHLKRHKNVASYRNG 767
Query: 740 SPM--NYGCTVAYIK 752
P +G TV IK
Sbjct: 768 MPSEGGFGVTVVEIK 782
>gi|169829506|ref|YP_001699664.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
gi|168993994|gb|ACA41534.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
Length = 788
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 229/747 (30%), Positives = 355/747 (47%), Gaps = 109/747 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L+ +I CID +LD AS L IR +E + L+SL++ A
Sbjct: 131 LTGLQHEINNCIDDNG-AVLDSASTTLRTIRQSLRSEEAKVRSKLESLIRGSNASKM--- 186
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +++ GI + SSSG T F+EP V+ NN RL
Sbjct: 187 -LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVHDQSSSGQTLFIEPDSIVQANNEIHRLKM 244
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE IL L+A + ++ L+ + +ID+ A+ + Q P ++
Sbjct: 245 KEQAEVERILLALSAMVQDVAPDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ---- 300
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I + +HPLL P+ D VP D
Sbjct: 301 --DGYIRLVRARHPLL----------------PI-------------------DIAVPND 323
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I+ + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +L F + ADIGD
Sbjct: 324 IEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAGLPVPALDGSQLAVFKQLFADIGD 383
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ESLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 384 EQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELGAGTDPQEGAALAISILDEVHGRG 443
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTYR+L G G SNA I+ +G
Sbjct: 444 ARVMATTHYPELKAYGYNRPGVANASVEFDIETLSPTYRLLIGVPGRSNAFEISSRLGLP 503
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II+RA+ R H + SL E RR+ E A + +L E L +E++D
Sbjct: 504 ESIIERAKGFTGTDR-----HEVESMIASLEETRRQSEDDAERSHALLLESESLRKELQD 558
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + + R L K ++ ++ + AK + + ++ + ++A + ++KE E
Sbjct: 559 KLQAYEERKEALDKKAKEKARKIVEEAKREAEGIIAELREMRKNA-----DQVVKEHE-- 611
Query: 562 IAAIVEAHRPDDDFSVSETN----------TSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
++EA + ++ + E N + G++V V S G + T++E +
Sbjct: 612 ---LIEARKRLEEATPLENNKVLKKAAQVKARAQNLVVGDEVKVLSYGQR-GTLLEKVSN 667
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ V VQ G +++++ +++ I K P +R +AG N
Sbjct: 668 TEWV-VQMGILKMKISDSDLEYIKPEKE-------PIVR---------TAGVKNRNGHV- 709
Query: 672 PRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
K LDLRG R E+A +D AL R + +IHG+GTG +++ + L
Sbjct: 710 ------KLELDLRGERYEDAILRTEKYIDDALLANYGR--VSIIHGVGTGALRQGIQSYL 761
Query: 728 RNHPRVA--KYEQESPMNYGCTVAYIK 752
+N+ RV ++ + G TV +K
Sbjct: 762 KNNKRVKSFRFGEAGEGGLGVTVVELK 788
>gi|158320865|ref|YP_001513372.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
gi|229486331|sp|A8MHU4.1|MUTS2_ALKOO RecName: Full=MutS2 protein
gi|158141064|gb|ABW19376.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
Length = 790
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 373/732 (50%), Gaps = 82/732 (11%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y + EL N + L +E+KI CI + + D AS +L IR R+ + +N D++ K
Sbjct: 115 YPIIQELGNNISSLKHIEDKIELCIISETELS-DNASPELRNIR--RQISSKN-DAIRNK 170
Query: 73 VAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + I A + P+IT R+ R V +K H+ +P G+ + SSSGAT F+EP
Sbjct: 171 LNSIITSASNQKYLQDPIITMRQDRYVVPVKQEHRGNIP-GLIHDQSSSGATIFVEPMAV 229
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN L E E IL + A IA+ +IK + E+D FA+ + M
Sbjct: 230 VELNNQLKELRLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMR 289
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
V P+L++ +S I+ +HPLL P V N+ M +G
Sbjct: 290 AVEPVLNTNKKIS------IKNGRHPLL----------------PSNKVVPNT-MWLGE- 325
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
DF +VITGPNTGGKT ++KTLGL +LM+++GL++PA +L
Sbjct: 326 -----DF------------HTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKL 368
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
FD + ADIGD QS+EQ+LSTFS H++ IV+I++ V+ +SLVL DE+G+GTDP+EG AL
Sbjct: 369 AIFDQVFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAAL 428
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL LR+ + V TTHY++L ENA+ EF + TL PTY++L G G S
Sbjct: 429 AMAILNSLREMGTVTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGVPGKS 488
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I++ +G +IQR+++L+ R+ + +L Q++ + R E + AA L
Sbjct: 489 NAFEISRKLGLSDFLIQRSKELL-----TREDIQFEDLLQNIEKNRSTAEKEKDEAARLR 543
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
E L E ++ + L + L + ++ + + AK+ D +V++ + +
Sbjct: 544 METQKLREEYYEKKQQLQTQKEKLISDAKREAYKIVKQAKLDADEIVENLKTLRAELEEK 603
Query: 550 EINSLIKESESAIAAIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
E+N I+E+ ++ + A + + + GE V++ SL +++ V+
Sbjct: 604 EMNKKIEEARKNLSDQMGKLAENMGEKLVLKTNKKPPKNLKIGESVNILSL-NQIGYVI- 661
Query: 608 VPGD-DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+P D + V +Q G M+V + +N+ R++++++ +++G
Sbjct: 662 LPEDANGEVQLQVGIMKVNMHVSNLE---------------RIKEEKDTKKTGVGKIVKS 706
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
+A + K +D+RG +EEA +D L A + + +IHG+GTGV+ +
Sbjct: 707 KA------ENIKMEIDVRGQNLEEAMLNVDKYLDDAYIAGLTHVTIIHGVGTGVLSAGLK 760
Query: 725 EILRNHPRVAKY 736
++L+ H +
Sbjct: 761 QMLKKHKHTKSF 772
>gi|422736468|ref|ZP_16792731.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
gi|315166623|gb|EFU10640.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
Length = 788
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 235/750 (31%), Positives = 368/750 (49%), Gaps = 118/750 (15%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL NP K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------NPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYRE-IEDEAKDLD--RRAAHLKAKETQQVQQEL--NFAKVQIDTVVQDF--ENQL 543
E+ + Y+ E+ K+L R+ A+ E ++ + + + K+Q+++ Q E+QL
Sbjct: 552 ELKEAYQVFFEEREKELQKARKEANKIIAEAEENAETIISDIRKMQLESGQQGGVKEHQL 611
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
DA S + E+ +A V + + G++V V + G +
Sbjct: 612 IDAKTQL--SRLHHEETKLA----------KNKVLKKAKEQKKLKAGDEVIVNTYGQR-G 658
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 659 TLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVTTIR 702
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE 721
S E + G + LDLRG R EEA ++D I A + ++HG GTG ++
Sbjct: 703 SAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGALRT 755
Query: 722 RVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+ E L+NH V YE +P N G A +
Sbjct: 756 GITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|403237728|ref|ZP_10916314.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 10403023]
Length = 786
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 217/750 (28%), Positives = 364/750 (48%), Gaps = 92/750 (12%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+L EL+ + L ELE+KI CID +++D AS+ L IR + + R E LD +
Sbjct: 117 PILAELITSITPLYELEQKIKNCIDDNG-VVMDGASDKLRGIRQQLRSSEARIREKLDHI 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
++ +AQ + +IT R R + +K ++ GI + SSSGAT F+EP+
Sbjct: 176 IRSSSAQ----KTLSDAIITIRNDRYVIPVKQEYRGTY-GGIVHDQSSSGATLFIEPQSV 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN+ E E IL L+ E+A + +D + E+D F +A +++ +
Sbjct: 231 VDLNNVLQEARVKEKQEIDRILFELSNEVALETESLYQNVDTLGELDFMFTKASYSKKVK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
G P ++ +V +HPL+ +
Sbjct: 291 GSKPKINGNGYVLIKKG------RHPLIAPKDV--------------------------- 317
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP DI++ + +VITGPNTGGKT ++KT+GL ++M+++GL +PA+ +
Sbjct: 318 --------VPNDIELGKKYTSIVITGPNTGGKTVTLKTIGLLTIMAQSGLQIPAQEESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F+ + ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG AL
Sbjct: 370 AVFESVYADIGDEQSIEQSLSTFSSHMVNIVDILKRVDSTSLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R + TTHY +L NA+ EF +ETL PTY++L G G S
Sbjct: 430 AISILDEVYNRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G II A+ + + + + SL + ++ E + A +
Sbjct: 490 NAFEISKRLGLSDTIIHAAKSHI-----SSETNTVENMIASLEKSKKDAERELDEAEGIR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASA 548
+ L+++++++ + + + L K ++ ++ + A + + V++D +L S
Sbjct: 545 KQAEILHKQLQEQIIEFNEQRDKLYEKAERKAEETIKNATTEAEEVIRDLRKMKLEQQSL 604
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+ + LI+ + A+ + + + +++ P G++V V SL K ++E
Sbjct: 605 VKEHQLIEAKKRLENAVPQTSKKTNKQAIASKAKRKLVP--GDEVKVISLNQK-GHLIEN 661
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
G+++ VQ G ++++VK+ ++ I +P P E + + +
Sbjct: 662 TGNNEW-QVQIGILKMKVKEKDLEFI--------GSPKP-----VETKPLATVRGKDYHV 707
Query: 669 SYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVL 724
S LDLRG R E+A +D AL R + +IHG GTG +++ V
Sbjct: 708 SL---------ELDLRGERYEDALVRVEKYIDDALLAGYPR--VSIIHGKGTGALRQGVQ 756
Query: 725 EILRNHPRV--AKYEQESPMNYGCTVAYIK 752
E L+NH V ++ + G TV +K
Sbjct: 757 EYLKNHRSVKSTRFGEAGEGGTGVTVVELK 786
>gi|227529705|ref|ZP_03959754.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350371|gb|EEJ40662.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
Length = 784
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 348/713 (48%), Gaps = 113/713 (15%)
Query: 63 MENLDSLLKKVAAQIFQ----------AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 112
+ + L+ K A+I Q A + ++T R R V + A ++ G+
Sbjct: 147 LHGIRQLISKTEAEIHQRMERFTQGKNAKYLSDAIVTVRNDRYVVPVLARYRNKF-GGVV 205
Query: 113 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL---TAEIAKSEREIKYLM 169
+ S+SG T ++EP VE+NN RL ++I E+ AIL +L +A I+ EI
Sbjct: 206 HDQSASGQTLYIEPAAVVEYNN---RLRQAQIEEKQAILEVLAELSALISPYRSEIAANA 262
Query: 170 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 229
+ +D A+A FA+ P+LS D+ + I +HPL+
Sbjct: 263 KILGHLDFINAKARFARDHKDSLPLLSP------DNQVIIRQARHPLI------------ 304
Query: 230 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 289
+P K V DIK+ E + +VITGPNTGGKT ++KT G
Sbjct: 305 ---DPQKV--------------------VANDIKIGDEYQSIVITGPNTGGKTITLKTFG 341
Query: 290 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 349
L +M +AGL++PA+ + FD I ADIGD QSLEQNLSTFSGH+ + ILE ++
Sbjct: 342 LIQMMGQAGLFIPAQEGSTIAVFDNIYADIGDEQSLEQNLSTFSGHMENVKSILERITSR 401
Query: 350 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 409
SLVL+DE+G+GTDP EG ALA SIL Y+ + V+TTHY +L NA+ E
Sbjct: 402 SLVLLDELGAGTDPKEGAALAMSILDYIASKGSTVVITTHYPELKVYGYDRPGTINASME 461
Query: 410 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 469
F ETL+PTY +L G G SN + IA+ +G ++ +I ++ LV + Q +
Sbjct: 462 FDQETLKPTYHLLLGIPGRSNGIEIAQRLGINQTVITESKSLVSEDSQDLNQ-----MIG 516
Query: 470 SLMEERRKLESQARTAASLHAEIMDLYREIE-DEAKDLDR---RAAHLKAKETQQVQQEL 525
L+E+R+ AR +++ RE + D LDR + L AK + E+
Sbjct: 517 ELVEQRKA----AREEKERLEKLLVANREKQADLTNKLDRFNEQRDSLLAKARNEANHEV 572
Query: 526 NFAKVQIDTVVQDFENQLRDASADEI--NSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
+ AK + D ++ QL + A + N LI +++ A+ A+ HR D + NT
Sbjct: 573 SMAKKKADRIIHHLR-QLEISQAGNVKENELI-DAQGALNAL---HREDPRL---KRNTV 624
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVRVKKNNIRPI 634
+ +HV GD A +V+ G +L VQ G +R+ + +N++ I
Sbjct: 625 LRRAKEKHDLHV---GD--AVLVKSYGQQGELLSKRSKHKWEVQIGILRMEIDENDLEKI 679
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+ + LRK++ ++ S+G + QTS LDLRG R E+A +
Sbjct: 680 SHKQ----------LRKEERAKEKVSSGVRTTQTR-----QTSAR-LDLRGHRYEQAMSE 723
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
L I A + S + +IHG GTG +++ E LR++PRV ++ +P N G
Sbjct: 724 LSAFIDHALLNNLSSVTIIHGKGTGALRKGTQEYLRSNPRVKSFDYAAPNNGG 776
>gi|332982288|ref|YP_004463729.1| MutS2 family protein [Mahella australiensis 50-1 BON]
gi|332699966|gb|AEE96907.1| MutS2 family protein [Mahella australiensis 50-1 BON]
Length = 784
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 335/681 (49%), Gaps = 94/681 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R V IK + +G+ + S SGAT F+EP VE NN E
Sbjct: 184 PIVTIRNGRYVVPIKQECRSSF-EGLIQDQSGSGATLFIEPMAVVEANNDLRAYMLQEQE 242
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ + I + +I + + ++DL FA+ + M+ V P+L+ + F
Sbjct: 243 EIERILASFSHMIGQHSEDILNDLGILAQLDLIFAKGQLSIEMNAVRPLLTENDGIIFKR 302
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPL+ +P D VPID+++
Sbjct: 303 A------RHPLI---------------DP--------------------DKVVPIDLELG 321
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++ITGPNTGGKT ++KT+GL +LM++AGL++PA ++ F + ADIGD QS+
Sbjct: 322 RQFTQLIITGPNTGGKTVTLKTIGLLTLMAQAGLHVPAGIGTQIRIFTGVYADIGDEQSI 381
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL SLVL+DE+G+GTDP+EG ALA +IL LR + +
Sbjct: 382 EQSLSTFSSHMTNIVHILNSADHRSLVLLDELGAGTDPTEGAALAMAILDELRHKGAIVA 441
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY+ L K NA EF +ETLRPTYR++ G G SNA I++ +G +++
Sbjct: 442 ATTHYSQLKAYALKTPGVINAGMEFDVETLRPTYRLIVGVPGKSNAFIISRKLGLSDEVL 501
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
RAQ L+ + + E +EE+R + + R A A++++ R +E + +
Sbjct: 502 ARAQALL------NESDLRFEDVIGKLEEQRHMAEKERAEA---AQVLEQARLLEQKYQQ 552
Query: 506 LDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDA---SADEINSLIKES 558
L+ + + + +QE L+ AK Q D +++ +LRDA ++ E N I+++
Sbjct: 553 LNTQLEQKRNDIIHKARQEAKVVLSRAKSQADQIIK----ELRDAQMQASKEANKTIEQA 608
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD-DDTVLV 617
+ + +E P+ + ++ P G QV++ L + + + P D + V V
Sbjct: 609 RTTLKKEIEELSPEQEAGEHYKPVTNVKP--GMQVYIVPL--RASGFILTPPDANGNVQV 664
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G M+ +++ +P + + + P +G A S++ G +
Sbjct: 665 QVGIMKAAASLSDLAELPEHEAQVKSQP------------TGKAASTSRSRDVGLEI--- 709
Query: 678 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
D+RG +EEA +D L A +F+IHG GTGV++ + + L +HP VA
Sbjct: 710 ----DVRGQMLEEALANIDKYLDDAAISGLEEVFIIHGKGTGVLRTGIQDFLGHHPHVAS 765
Query: 736 YEQ----ESPMNYGCTVAYIK 752
Y E M G TV +K
Sbjct: 766 YRTGRYGEGEM--GVTVVKLK 784
>gi|418614027|ref|ZP_13177017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
gi|374821896|gb|EHR85937.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
Length = 782
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 227/762 (29%), Positives = 363/762 (47%), Gaps = 117/762 (15%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + + LT+L ++I D L D AS L+ IR++ +R +NLD
Sbjct: 117 KYPILHDKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKNQGNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPN 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+
Sbjct: 230 SVVEMNNQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYAR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P D +I + HPLL +N+ DVE
Sbjct: 289 TIKGTKPTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------ 330
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 331 -----------------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG
Sbjct: 368 SQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL Y+R L + TTHY +L NA+ EF +ETL PTY++L G
Sbjct: 428 AALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ----- 481
G SNA +I+K +G II +A+ ++ + + + +SL + ++++ Q
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELD 542
Query: 482 --ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
R A H + Y++ ++ K L A K K Q+V+ A + D ++++
Sbjct: 543 RLVREAQQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKEL 595
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
N LRD E +KE E I + + DD + V ++ G++V
Sbjct: 596 RN-LRDHKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVK 646
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S G K + V + +VQ G +++++ PI + ++ ++
Sbjct: 647 VLSYGQKGEVLELVGE--EEAVVQMGIIKMKL------PIEDLEKTKKKKEKHTKMVTRQ 698
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+R QT K LDLRG R EEA ++LD L A + +++IH
Sbjct: 699 NR------------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIH 740
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G GTG +++ V + L+ H V ++ P +G TVA +K
Sbjct: 741 GKGTGALQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|154503470|ref|ZP_02040530.1| hypothetical protein RUMGNA_01294 [Ruminococcus gnavus ATCC 29149]
gi|153795570|gb|EDN77990.1| MutS2 family protein [Ruminococcus gnavus ATCC 29149]
Length = 791
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 323/660 (48%), Gaps = 81/660 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ E A+ EI+ + ++D FAR A M+ P+L++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYHILTDLDFIFARGALAFSMNASRPLLNT------DG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A + R Q +L L +R +E + A+ EI L + + + +
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 559
++ + + A+ ++ L AK D +++F ++ SA E+ K E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ ++ ++ +P ++ ++ + GE V V S+ + T+ +P V VQ
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +R +V +++ I ANP AP+ K R S ++ S P +
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPKSFK----RTSKGKLKMSKSLSVSPEI---- 716
Query: 679 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A S + V+HG GTG +++ + E LR V Y
Sbjct: 717 ---NLLGKTVDEAVSELDKYLDDALLSHLSTVRVVHGKGTGALRKGIHEFLRRQKHVKSY 773
>gi|403070305|ref|ZP_10911637.1| DNA mismatch repair protein [Oceanobacillus sp. Ndiop]
Length = 781
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 229/726 (31%), Positives = 351/726 (48%), Gaps = 108/726 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L ELE+ I CID + +D AS L IR+ R E L+S + ++ + A
Sbjct: 127 LRELEQHIKSCIDDHGHM-MDSASAKLRSIRSSIRTYENRIREKLESYTRNNSSMLSDA- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
++T R R + +K ++ + GI + SSSG T FMEPK V+ NN +
Sbjct: 185 -----IVTIRNDRYVLPVKQEYRGTI-GGIVHDQSSSGQTLFMEPKAVVDLNNQLHEAIS 238
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL L+ IA ER++ + + +ID FARA M P ++ + ++
Sbjct: 239 KEQQEIEQILKELSEHIASFERDLYENVTVLGKIDFMFARAKLGNLMKASRPKINDRGYI 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ P+ V N D
Sbjct: 299 KMQQA------RHPLI----------------PINEVVAN-------------------D 317
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ +VITGPNTGGKT ++K +GL +LM+++GL +PA + + F+ + ADIGD
Sbjct: 318 VEIGKTYTSIVITGPNTGGKTVTLKMIGLCTLMAQSGLQIPALDGCEMAVFEEVFADIGD 377
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H++ IVDI++ V SLVL DE+GSGTDP EG ALA SIL + R
Sbjct: 378 EQSIEQNLSTFSSHMTNIVDIIKKVDYRSLVLFDELGSGTDPQEGAALAMSILDEVVSRE 437
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF++ETL+PTYR+L G G SNA I+K +G D
Sbjct: 438 ARVIATTHYPELKAYGYNRENVVNASVEFNVETLKPTYRLLIGVPGRSNAFEISKRLGLD 497
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+II RA+ LV + SL + + E A + E L EI
Sbjct: 498 EQIIDRAKGLV-----GADSKSVETMIASLEKSQLDAERDYEQAHEILLESEQLREEIMR 552
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
E K L+++ L K ++ ++ L+ A+ + + +V N++R N +KE E
Sbjct: 553 EWKQLEQKKETLYKKAEEKAEKALSQAREEAELIV----NEIRQMKT---NVTLKEHEWI 605
Query: 562 IA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD--KLATV-----VEVPGDDD 613
A ++E +P+ +S + P E+ ++K GD KL TV V D+
Sbjct: 606 EAKKMLEEAQPN----LSRKQSKQTEPVAKEKQNLKP-GDEIKLLTVNQKGEVLEKVSDN 660
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
+VQ G M+V+VK+++++ + +++ P ++ SN S
Sbjct: 661 EYMVQVGIMKVKVKRSDLQ-LLGKQKQTIQKPVATIK------------GSNFHVSA--- 704
Query: 674 VQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E+A +L D+ LA + S +IHG GTG +++ V E ++
Sbjct: 705 ------ELDLRGERYEDALLKLEKYIDDVLLAGYSKAS---IIHGKGTGALRKGVQEYVK 755
Query: 729 NHPRVA 734
HP +A
Sbjct: 756 RHPHIA 761
>gi|229545911|ref|ZP_04434636.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256853039|ref|ZP_05558409.1| MutS2 protein [Enterococcus faecalis T8]
gi|307291392|ref|ZP_07571276.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
gi|229308979|gb|EEN74966.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256711498|gb|EEU26536.1| MutS2 protein [Enterococcus faecalis T8]
gi|306497623|gb|EFM67156.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
Length = 788
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|344996322|ref|YP_004798665.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|343964541|gb|AEM73688.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 786
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 212/704 (30%), Positives = 356/704 (50%), Gaps = 88/704 (12%)
Query: 44 ILDRASEDLELIRAERKRNME-----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E L+ +++ Q F + +P+IT R ++ +
Sbjct: 141 ILDTASPRLKEIR-DRIRRLEARIRDELNKMIRDPKIQRF----LQEPIITVRGDKLLLP 195
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAE 157
+KA HK + GI + S++GAT F+EP VE +N ++R++ SE EE IL L+
Sbjct: 196 VKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN-QIRVARSEEKEEIERILQELSQL 253
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
I+ S EIK + + E+D+ F +A +A PIL++ + IN++ +HPL+
Sbjct: 254 ISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGY------INLKKARHPLI 307
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+ + E V+VITGPN
Sbjct: 308 EKEKV-----------------------------------VPIDVHLGKEFDVLVITGPN 332
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L++++G++LPA + F I ADIGD QS+ Q+LSTFS H+
Sbjct: 333 TGGKTVTLKTIGLFCLLAQSGIFLPADEGSEVCVFSKIFADIGDEQSIIQSLSTFSAHMK 392
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + +LVL+DEIGSGTDP EG ALA +IL++L + V TTHY +L
Sbjct: 393 NIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAILKFLFKKGSKVVATTHYGELKTFA 452
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
++ RFENA+ EF + TL+PTYR+L G G SNAL I+ ++G +I++ A+ + +
Sbjct: 453 QQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLKEEIVELAKSYMSKKTL 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E +++ + +R++LE A L E +L + +E+E + + +K +
Sbjct: 513 EL-----TDIINEMERKRKELEETLENANKLKIEAENLKKTLEEERRRFEAEKQRIKERA 567
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+++ ++ F + D V + F+ + A + + ++K+ E + + S
Sbjct: 568 SREARE---FVQRVEDEVEKLFKELRKIAESLKEKEMLKQLEEKKREYENLVKSIEQASQ 624
Query: 578 SETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
E S P+ G++V+VKS D V +P + V+ G M++ V +++ I
Sbjct: 625 KEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPDSKGNLTVRIGIMKLSVNISDVFEI 683
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+E+ + + SS + + + S+D+RG ++A +
Sbjct: 684 ------------------EEETATKNLVSSKKAVEVNQK--SIDMSIDVRGKTSDDAILE 723
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 724 VDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 767
>gi|257416014|ref|ZP_05593008.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|300860265|ref|ZP_07106352.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|384513156|ref|YP_005708249.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|422733668|ref|ZP_16789970.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|422738643|ref|ZP_16793838.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|428766910|ref|YP_007153021.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|430360426|ref|ZP_19426273.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|430368259|ref|ZP_19428131.1| MutS 2 protein [Enterococcus faecalis M7]
gi|257157842|gb|EEU87802.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|295112922|emb|CBL31559.1| MutS2 family protein [Enterococcus sp. 7L76]
gi|300849304|gb|EFK77054.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|315145717|gb|EFT89733.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|315160196|gb|EFU04213.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|327535045|gb|AEA93879.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|427185083|emb|CCO72307.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|429512902|gb|ELA02497.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|429516421|gb|ELA05913.1| MutS 2 protein [Enterococcus faecalis M7]
Length = 788
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|52081359|ref|YP_080150.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404490236|ref|YP_006714342.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|81690944|sp|Q65GE2.1|MUTS2_BACLD RecName: Full=MutS2 protein
gi|52004570|gb|AAU24512.1| DNA mismatch repair protein MutSB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349238|gb|AAU41872.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
Length = 785
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 227/741 (30%), Positives = 369/741 (49%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L+ELE I CID + LD ASE L IR + + R + L+S+L+ +AQ
Sbjct: 129 LSELERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIITIRNDRFVIPVKQEYRSSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
+E E IL +LT + A+ E+ + + + +D FA+A +A+ V P +++ +V
Sbjct: 243 NEKQEIERILRVLTEKTAEHTNELFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL PL D VP D
Sbjct: 303 RLIQA------RHPLL----------------PL-------------------DEVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KTLGL ++M+++GL++PA+ FD + ADIGD
Sbjct: 322 IELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ++ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF ++TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVIATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I RA + + + + SL + +++ E++ + ++ AE L+R+++
Sbjct: 502 DYLIGRA-----KAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KES 558
+ + + L + Q+ +++ A + D ++Q D A + + LI K
Sbjct: 557 QISEWQEKKDKLYEEAEQKAAEKVKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ + +A +P + +T+ P G++V V + G K T++E G + VQ
Sbjct: 617 EEAVPSFEKAKKP----AQKKTDKRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ + K+A P ++Q A A G S
Sbjct: 669 IGILKMKVKEKDLEFL-----KSAPEP---------EKQKTIA------AVKGKDYHVSL 708
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A H++ D LA + S +IHG GTG +++ V ++L++H V
Sbjct: 709 E-LDLRGERFENALHRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KNSRFGEAGEGGSGVTIVELK 785
>gi|256762410|ref|ZP_05502990.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|307277459|ref|ZP_07558551.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|422694899|ref|ZP_16752887.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
gi|256683661|gb|EEU23356.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|306505724|gb|EFM74902.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|315147901|gb|EFT91917.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
Length = 788
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|256962011|ref|ZP_05566182.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|257089797|ref|ZP_05584158.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|293382380|ref|ZP_06628319.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|293389358|ref|ZP_06633816.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|312904147|ref|ZP_07763315.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|312907378|ref|ZP_07766369.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|312909995|ref|ZP_07768842.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|422689484|ref|ZP_16747596.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
gi|256952507|gb|EEU69139.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|256998609|gb|EEU85129.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|291080325|gb|EFE17689.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|291081245|gb|EFE18208.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|310626406|gb|EFQ09689.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|310632623|gb|EFQ15906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|311289268|gb|EFQ67824.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|315577532|gb|EFU89723.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
Length = 788
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|422685288|ref|ZP_16743509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
gi|315029974|gb|EFT41906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
Length = 788
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|365158083|ref|ZP_09354324.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
gi|363621912|gb|EHL73094.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
Length = 784
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 229/750 (30%), Positives = 366/750 (48%), Gaps = 134/750 (17%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+L E + LTELE I +D I LD AS L +R++ + R E L+S+
Sbjct: 117 PILSEQTEQIPVLTELEHDIKRAVDENGEI-LDSASSTLREVRSQIRIHEGRIRERLESM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
++ AQ + I +T R R + +K +++ GI + SSSG T F+EP+
Sbjct: 176 IRSKNAQKMLSDAI----VTIRNDRYVIPVKQEYRHHY-GGIVHDQSSSGQTLFIEPESI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN +L E E IL L+A++ ++ E+ ++ + ++D FA+A A+ M
Sbjct: 231 VQLNNQLKQLKLKEQEEIEKILRELSAKVQENADELLVIVQVMGDLDFIFAKAKLAKSMK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P+++ + + I I +HPLL P++
Sbjct: 291 ASKPLMNREGY------IRIHQARHPLL----------------PIEE------------ 316
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP DI++ + +VITGPNTGGKT ++KT+GL +LM+++GL +PA+ +
Sbjct: 317 -------AVPNDIELGKDYTAIVITGPNTGGKTVTLKTIGLLTLMAQSGLQIPAQEGSEM 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ ESLVL DE+G+GTDP EG AL
Sbjct: 370 AVFHSVFADIGDEQSIEQSLSTFSSHMVNIVDILKEVTGESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + + V TTHY +L NA+ EF++ETL PTYR+L G G S
Sbjct: 430 AISILDEVLEVGARVVATTHYPELKAYGYNRDGVINASVEFNVETLSPTYRLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQQHRKSELYQSLMEERRKL 478
NA I++ +G + KII+RA++ ++ L R+ K E E R L
Sbjct: 490 NAFEISERLGLNHKIIERARQYTGADTNEVENMIASLERSRKLAEKEE-----QEARDYL 544
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-KAKETQQVQQELNFAKVQIDTVVQ 537
+S + L ++ + Y + E+ +R A+ + + + + + + K+++
Sbjct: 545 KSAEKLLKDLQNQMQEFYEKKEEMYSRAEREASKIVEKAKEEAEEIIRHLRKLRL----- 599
Query: 538 DFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSVSETN---TSSFTPQ 588
E N+ +KE E ++EA + P+ D + + SF P
Sbjct: 600 ------------EKNAEVKEHE-----LIEARKRLSDAMPEIDKKTPQPKAKRSRSFMP- 641
Query: 589 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
G++V V S G K + +V G++ LVQ G +++ V ++++ IP+ K+ +P P
Sbjct: 642 -GDEVKVLSFGQKGTILEKVDGNE--WLVQVGILKMNVNESDLEYIPSQKK---VDPKPL 695
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWE 703
+ +D G LDLRG R E+A ++ D LA +
Sbjct: 696 ATVKGKDYHVGL-------------------ELDLRGERYEDALIKVEKYIDDAVLAGYP 736
Query: 704 SRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
S +IHG GTG +++ V E+L+ H V
Sbjct: 737 RVS---IIHGKGTGALRKGVQELLKRHRSV 763
>gi|373116161|ref|ZP_09530317.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669625|gb|EHO34724.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
Length = 789
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 216/712 (30%), Positives = 347/712 (48%), Gaps = 90/712 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + +L K+ + QA + + +IT+R R V +K+ H
Sbjct: 146 IADAASPELASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEH 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ +
Sbjct: 205 KNDVP-GLVHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I D ++ +D+ FARA A M P + + + + +HPLL
Sbjct: 264 DITQDYDLLILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL------ 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P D V D+ + + +VITGPNTGGKT
Sbjct: 311 ---------DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL
Sbjct: 342 TIKTIGLLTLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGIL 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E+L+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L
Sbjct: 402 GEADDETLILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF++++L PTYR+L G G SNA I++ +G + IIQ+A R + + R
Sbjct: 462 ENASCEFNVDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVR 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQ 520
++ L E+R+++E + AA L RE+E+ AK A + +AK ++
Sbjct: 517 FEDVLTQLDEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEK 569
Query: 521 VQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDF 575
Q E L+ A+ D V ++ + R +E + + +A+ ++ EA
Sbjct: 570 AQAEARAILDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGAR 629
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + G+ V + +G + ATV+ V D ++ +Q G +++ ++ +R +
Sbjct: 630 PEEPAPPPTRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVE 687
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+++A R A + R + +DLRGM +EA L
Sbjct: 688 GETQQSAKKVVAR-------------------AEHKLRTLGASPEVDLRGMMTDEAIGAL 728
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
D+ L A + + +IHG GTG V++ V E L+ V + P YG
Sbjct: 729 DLFLDNAVLGKLNEVRIIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 777
>gi|347534558|ref|YP_004841228.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504614|gb|AEN99296.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 785
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 217/712 (30%), Positives = 352/712 (49%), Gaps = 92/712 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
ILD AS L IR + R N+ S ++ Q+ + P+IT R R + +KA +
Sbjct: 146 ILDSASGTLSSIRRQISRLEGNIKSKMESFT-HGKQSKYLSDPIITIRDDRYVIPVKAEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K + GI + S+SG T ++EP V NN R +E EE IL+ L+ I +
Sbjct: 205 KQKI-GGIVHDQSTSGQTIYLEPASVVGLNNDLRREQINEREEEKRILAQLSDLIRPYQM 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ ++ DL A+A +A M P +S D+ +N++ +HPL+
Sbjct: 264 ELLSNAKQLGHFDLINAKARYAASMKATRP------EISADNQVNLKNARHPLI------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
N E VG+ DIK+ + R ++ITGPNTGGKT
Sbjct: 312 -----------------NQEKVVGN------------DIKLGFDYRQIIITGPNTGGKTI 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
+MKTLGL LM+++GL++ A + +D + ADIGD QS+EQNLSTFS HI I+ IL
Sbjct: 343 TMKTLGLLQLMAQSGLFITADEGSQAGLYDEVFADIGDDQSIEQNLSTFSSHIDNIISIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ ++ SLVLIDE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 403 KRMTNRSLVLIDELGAGTDPREGAALAMSILDAISQSDAEVLSTTHYPELKVYGYNRPET 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER--------L 455
NA+ EF +TL PTYR++ G G SNAL+IA +G + II A+ LV+ +
Sbjct: 463 INASMEFDEKTLSPTYRLMIGIPGQSNALSIAGRLGLNESIIMEAESLVDEDSQDINSMI 522
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ QQ + ++ + RKLE + + LH E+ + + + +RR A +
Sbjct: 523 KKLTQQTKAAD------DRARKLEVELKIVTELHQELTEKFNQF------TERRDAMIN- 569
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
K + Q ++ K Q + ++ D + ++A+ D + + E + I A+ E H +
Sbjct: 570 KAKRDANQIVSRTKRQANEIIDDLHKRQKNAAIDVKENELIEQKGKINAL-EQHTELKNN 628
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
V + + + + + G+ V VK+ G + + ++ + + V+ G ++++V + ++ +
Sbjct: 629 KVLKRSKAKKSFKVGDDVLVKTYGQRGVLLKKI--GNHSWEVELGILKMKVDETDMDRVK 686
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K P+ R Q ++ S+ +S P +LDLRG+R ++A +L
Sbjct: 687 EEK--------PKHRAQTVVHRTRSSSTS-------P-------TLDLRGVRYDDAMQRL 724
Query: 696 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
D I A + +IHG GTG +++ V+ LR + +V ++ SP N G
Sbjct: 725 DRYIDSALLAGYPSVTIIHGKGTGALRKGVINYLRGNRQVKEF-GFSPANSG 775
>gi|256618984|ref|ZP_05475830.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
gi|256598511|gb|EEU17687.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
Length = 788
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDTLVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|319647266|ref|ZP_08001488.1| MutS2 protein [Bacillus sp. BT1B_CT2]
gi|317390613|gb|EFV71418.1| MutS2 protein [Bacillus sp. BT1B_CT2]
Length = 785
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 227/741 (30%), Positives = 369/741 (49%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L+ELE I CID + LD ASE L IR + + R + L+S+L+ +AQ
Sbjct: 129 LSELERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIITIRNDRFVIPVKQEYRSSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
+E E IL +LT + A+ E+ + + + +D FA+A +A+ V P +++ +V
Sbjct: 243 NEKQEIERILRVLTEKTAEHTNELFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL PL D VP D
Sbjct: 303 RLIQA------RHPLL----------------PL-------------------DEVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KTLGL ++M+++GL++PA+ FD + ADIGD
Sbjct: 322 IELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ++ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF ++TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVIATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I RA + + + + SL + +++ E++ + ++ AE L+R+++
Sbjct: 502 DYLIGRA-----KAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KES 558
+ + + L + Q+ +++ A + D ++Q D A + + LI K
Sbjct: 557 QISEWQEKKDKLYEEAEQKAAEKVKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ + +A +P + +T+ P G++V V + G K T++E G + VQ
Sbjct: 617 EEAVPSFEKAKKP----AQKKTDKRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ + K+A P ++Q A A G S
Sbjct: 669 IGILKMKVKEKDLEFL-----KSAPEP---------EKQKTIA------AVKGKDYHVSL 708
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A H++ D LA + S +IHG GTG +++ V ++L++H V
Sbjct: 709 E-LDLRGERYENALHRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KNSRFGEAGEGGSGVTIVELK 785
>gi|257086832|ref|ZP_05581193.1| MutS 2 protein [Enterococcus faecalis D6]
gi|422722610|ref|ZP_16779160.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|424673309|ref|ZP_18110252.1| MutS2 family protein [Enterococcus faecalis 599]
gi|256994862|gb|EEU82164.1| MutS 2 protein [Enterococcus faecalis D6]
gi|315027355|gb|EFT39287.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|402353119|gb|EJU87955.1| MutS2 family protein [Enterococcus faecalis 599]
Length = 788
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNVF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|257085338|ref|ZP_05579699.1| MutS 2 protein [Enterococcus faecalis Fly1]
gi|256993368|gb|EEU80670.1| MutS 2 protein [Enterococcus faecalis Fly1]
Length = 788
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 362/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKHAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ K PR+ + S
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPVAPQKEAK-----PRVTTVR------S 703
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
A SS+ LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 704 AESSH-----------VSTQLDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|410667688|ref|YP_006920059.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105435|gb|AFV11560.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 793
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 216/739 (29%), Positives = 345/739 (46%), Gaps = 91/739 (12%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 86
L+EKI CI D + I D AS +L +R + + + LL ++ ++ + +P
Sbjct: 129 LQEKINLCIQPDGE---ISDSASPELARLRQQIRTLQVRIRGLLDEILSKPEWNRYLQEP 185
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+ T R R V +K H+ P G+ ++S SGAT FMEP V N + + E
Sbjct: 186 IYTVRGDRYVVPVKQEHRSQFP-GLVHDLSGSGATVFMEPLPLVGPMNELMAKRTAAHRE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
E IL LT +A I+ + + E+D A+ + + G P + S
Sbjct: 245 EQRILEELTKMVAAFHDAIQENLRILGELDFILAKGHLSSKLKGNPPRFGDGRCLVLKSG 304
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPLL G VP+D+ +
Sbjct: 305 ------RHPLLRGKV------------------------------------VPLDLHLGR 322
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++ITGPNTGGKT ++KT+GL +M++AGL++PA LP + ADIGD QS+E
Sbjct: 323 DFDCLIITGPNTGGKTVALKTVGLLVVMAQAGLHIPAGERTVLPVLQNVFADIGDEQSIE 382
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFSGH+ IV IL+ V SLVL+DE+G+GTDP +G AL +IL L ++ L +
Sbjct: 383 QSLSTFSGHMKNIVRILDQVGEGSLVLLDELGAGTDPEQGAALGMAILDRLINKGALIIA 442
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTH+++L R ENA+ EF TL+PTYR+ G G+SNA IA +G D ++++
Sbjct: 443 TTHFSELKIFAHTRQRAENASVEFDSRTLQPTYRLSIGVPGESNAFEIAARLGLDSEVVE 502
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
RA+ LRPE Q S+L + L E++ S A AE+ L ++ E + L
Sbjct: 503 RARSF---LRPE--QRELSDLIKHLKEDQFAASSARAEAELERAEVEKLKEKLRREEERL 557
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-----------DEINSLI 555
+ + + ++ ++ + A+ + + +++ ++R A ++ L
Sbjct: 558 RNKQQEILSMAHEEARELVRTARREAEQLIRFLREKMRQEDARIALEEAQAVRQKLGDLS 617
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
E AA E+ D + P+F ++ V+ PG D V
Sbjct: 618 GRIEERAAATEESAFAGDIPDTLKPGDVVAIPRFHQE----------GYVISPPGPDGEV 667
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
LVQ G +++ + PI +R L++ ++ ++ + GS + + Q
Sbjct: 668 LVQVGALKLHL------PIKELRRS--------LKRDKQKKELTATGSRSGGRTIKEHAQ 713
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
S D RGMRVEE+ ++D L A + + +IHG GTG ++E V + L HP V
Sbjct: 714 VSPE-FDFRGMRVEESLKEIDKYLDAAYLAGINRVSLIHGKGTGALREAVRQYLSKHPFV 772
Query: 734 AKYEQESPMNYGCTVAYIK 752
A Y + G V ++
Sbjct: 773 ASYRNGNYYEGGTGVTIVE 791
>gi|257082629|ref|ZP_05576990.1| MutS 2 protein [Enterococcus faecalis E1Sol]
gi|256990659|gb|EEU77961.1| MutS 2 protein [Enterococcus faecalis E1Sol]
Length = 788
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNVF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|365845197|ref|ZP_09385983.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
gi|364561374|gb|EHM39279.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
Length = 789
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 218/712 (30%), Positives = 350/712 (49%), Gaps = 90/712 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + +L K+ + QA + + +IT+R R V +K+ H
Sbjct: 146 IADAASPELASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEH 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ +
Sbjct: 205 KNDVP-GLVHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I D ++ +D+ FARA A M P + + + + +HPLL
Sbjct: 264 DITQDYDLLILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL------ 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P D V D+ + + +VITGPNTGGKT
Sbjct: 311 ---------DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL
Sbjct: 342 TIKTIGLLTLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGIL 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E+L+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L
Sbjct: 402 GEADGETLILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF++++L PTYR+L G G SNA I++ +G + IIQ+A R + + R
Sbjct: 462 ENASCEFNVDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVR 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQ 520
++ L E+R+++E + AA L RE+E+ AK A + +AK ++
Sbjct: 517 FEDVLTQLDEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEK 569
Query: 521 VQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDF 575
Q E L+ A+ D V ++ + R +E + + +A+ ++ EA
Sbjct: 570 AQAEARAILDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGAR 629
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + G+ V + +G + ATV+ V D ++ +Q G +++ ++ +R +
Sbjct: 630 PEEPAPPPTRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVE 687
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+++A R + + S G+S E +DLRGM +EA L
Sbjct: 688 GETQQSAKKVVAR-----AEHKLRSLGASPE--------------VDLRGMMTDEAIGAL 728
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
D+ L A + + +IHG GTG V++ V E L+ V + P YG
Sbjct: 729 DLFLDNAVLGKLNEVRIIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 777
>gi|339448753|ref|ZP_08652309.1| MutS2 protein [Lactobacillus fructivorans KCTC 3543]
Length = 785
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 227/739 (30%), Positives = 363/739 (49%), Gaps = 91/739 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L + K+ N L E+ +++ ID + LD AS +L IR E R N+ + + K
Sbjct: 119 LYDEAKDFNDLPEISKRLQASIDEDGRV-LDSASSELRSIRREITRLETNIKTTMNKYI- 176
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
Q+ + +P+IT R R + +K+ K GI + S+SG T ++EP+ V NN
Sbjct: 177 HGKQSKYLSEPIITVRDGRYVIPVKSEDKQKF-GGIVHDQSTSGLTLYIEPQSVVSSNND 235
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
R E E ILS L+ I + E+ ++ DL A+A FA M P +
Sbjct: 236 LRRSQLDERKEIHKILSELSDMIRPYQEELMENAAQLGHFDLINAKAKFADQMHATKPSV 295
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
S ++HV N++ ++HPL+ + + VG+
Sbjct: 296 SKENHV------NLKNVRHPLI-----------------------DQKKVVGN------- 319
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
DI++ + R ++ITGPNTGGKT ++KTLG+ LM+++G+++ A ++ FD +
Sbjct: 320 -----DIQIGSDFRQIIITGPNTGGKTITIKTLGINQLMAQSGIFVMANEGSQVGVFDNV 374
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+E NLSTFS H+ +++IL+ ++ +SL+LIDE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEANLSTFSSHMDNLINILKHITNQSLILIDELGAGTDPKEGAALAMSILD 434
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
+ + + TTHY +L N++ EF +TL+PTYR+L G G SNALNIA
Sbjct: 435 KMGESGSEVLATTHYPELKVYGYNRPETINSSMEFDEKTLKPTYRLLLGVPGQSNALNIA 494
Query: 436 KSIGFDRKIIQRAQKLVERLRPE--RQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
K +G II A L++ + R + ++ + E RKL+ + LHA++
Sbjct: 495 KRLGLPDTIISEASSLMDSDSQDINRMIKQLTKQTKDADERARKLKVELAENERLHADLN 554
Query: 494 DLYREIEDE----AKDLDRRAAHLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASA 548
D + D D R+A + +K +Q + + N +VQ T EN+L DA
Sbjct: 555 DKLTKFTDNKDSMVNDAKRQANQIVSKTRRQANEIINNLHQVQKRTNQPIKENELIDAKG 614
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+INSL + E +++ + F + G+ V VKS G + +++
Sbjct: 615 -KINSLEQHPELKNNRVLKREKAKHHF------------KEGDDVLVKSYGQR-GVLLKK 660
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
G D+ VQ G ++++V ++++ K P+ R++ S+G S
Sbjct: 661 MGKDNWE-VQLGILKMKVSESDLEQTHKEPGKKKHTPSV--------RRTRSSGIS---- 707
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
P +LDLRG R E A +LD I A + +IHG GTG +++ V+
Sbjct: 708 ---P-------TLDLRGERYESAMQRLDRYIDSALLAGYPSVTIIHGKGTGALRKGVISY 757
Query: 727 LRNHPRVAKYEQESPMNYG 745
L+ + RV ++ SP N G
Sbjct: 758 LKRNRRVKEF-GFSPANAG 775
>gi|374711381|ref|ZP_09715815.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus inulinus CASD]
Length = 783
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 224/751 (29%), Positives = 364/751 (48%), Gaps = 99/751 (13%)
Query: 17 LELLKNCNFLT----ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
L +L+ C ELE KI ID + + +D AS L IR + + DS +K+
Sbjct: 117 LPILQECTETIDPPGELERKIRRAIDDQGGV-MDSASPALRHIRGQ----IRTCDSRVKQ 171
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
I ++ G + + LIT R R + +K ++ GI + S+SGAT F+EP+ V
Sbjct: 172 KLENIVRSSGKMLSETLITIRNDRQVIPVKQQYRASF-GGIVHDQSASGATLFIEPQAIV 230
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN E E IL +L+ E ++ + ++ + ++D FA+AG+A +
Sbjct: 231 DLNNQLSEARAKERHEIERILRVLSEETSEYAEVMLENIEALAQLDFIFAKAGYAHEIKA 290
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P L+ Q I ++ +HPL+ +
Sbjct: 291 TRPKLNDQG------IIRLKKARHPLIDRQRV---------------------------- 316
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPID+ + T ++ITGPNTGGKT S+KT GL +LM+++GL +P
Sbjct: 317 -------VPIDVLFDEHTHALIITGPNTGGKTVSLKTTGLLTLMAQSGLQIPVDEGSEAS 369
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F + ADIGD QS+EQ+LSTFS H++ IV IL+ V SLVL DE+G+GTDP EG AL+
Sbjct: 370 VFREVFADIGDEQSIEQSLSTFSSHMTNIVTILKRVDFNSLVLFDELGAGTDPQEGAALS 429
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL + + V TTHY++L + NA+ EF +ETL PTYR+L G G SN
Sbjct: 430 MSILDAVYGKGATIVCTTHYSELKAYAYERQGVMNASVEFDVETLSPTYRLLLGVPGRSN 489
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I++ +G +II A +L+ + ++ ++ SL + R+ E + A L
Sbjct: 490 AFEISRKLGLPAEIIAGA-----KLQISTETNQVDKMIASLEQNRKTAEREEERARKLKL 544
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E+ ++ + +L+R + K ++ ++ L+ A+ + + ++++ N + E
Sbjct: 545 EVEAREADLTKKLNELERSKEEILNKAREKAERALSGARREAEEIIEELRNYQHSGNVKE 604
Query: 551 INSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLATVVE 607
+ LI ++++ +A +++ +P D V + SF P G+ V + S G + V +
Sbjct: 605 -HQLI-DAKTKLAHALDSLQPKDSDQVKKPEQKLDRSFHP--GDTVKIISFGQEGYIVSK 660
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
+ D LVQ G +++ VK N+++ I K K A P +R
Sbjct: 661 I--SDQDYLVQAGILKMNVKANDLKRI---KEKKQAKPVVNVRTA--------------- 700
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQ----LDIALACWESRSVLFVIHGMGTGVVKERV 723
QT + LDLRG R E+A + LD A+ +R + +IHG GTG +++ V
Sbjct: 701 ------TQTVRPELDLRGERYEDAMRRVEKYLDEAMLAGYAR--VSIIHGKGTGALRKGV 752
Query: 724 LEILRNHPRV--AKYEQESPMNYGCTVAYIK 752
+++ HPRV A+ + G TV K
Sbjct: 753 TKLIDRHPRVKNARLGSQGEGGSGVTVVEFK 783
>gi|312900671|ref|ZP_07759968.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
gi|311292152|gb|EFQ70708.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
Length = 788
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 234/759 (30%), Positives = 365/759 (48%), Gaps = 136/759 (17%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+KE + A + + H + + + + EQ +K+ GD++
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLA-----KNKVLKKAKEQKRLKA-GDEV- 649
Query: 604 TVVEVPGDDDTVL---------VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
+V G T+L VQ G +++ V + ++ P+ AP Q+E
Sbjct: 650 -IVNTYGQRGTLLKDNGKGQWQVQLGILKMNVSEEDMTPV-----------AP----QKE 693
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIH 712
+ + S E + G + LDLRG R EEA ++D I A + ++H
Sbjct: 694 AKPRVTTVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVH 746
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
G GTG ++ + E L+NH V YE +P N G A +
Sbjct: 747 GKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|256965209|ref|ZP_05569380.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|307273312|ref|ZP_07554558.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
gi|256955705|gb|EEU72337.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|306510297|gb|EFM79321.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
Length = 788
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 234/750 (31%), Positives = 368/750 (49%), Gaps = 118/750 (15%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYRE-IEDEAKDLD--RRAAHLKAKETQQVQQEL--NFAKVQIDTVVQDF--ENQL 543
E+ + Y+ E+ K+L R+ A+ E ++ + + + K+Q+++ Q E+QL
Sbjct: 552 ELKEAYQVFFEEREKELQKARKEANKIIAEAEENAETIISDIRKMQLESGQQGGVKEHQL 611
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
DA S + E+ +A V + + G++V V + G +
Sbjct: 612 IDAKTQL--SRLHHEETKLA----------KNKVLKKAKEQKKLKAGDEVIVNTYGQR-G 658
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 659 TLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVTTVR 702
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE 721
S E + G + LDLRG R EEA ++D I A + ++HG GTG ++
Sbjct: 703 SAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGALRT 755
Query: 722 RVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+ E L+NH V YE +P N G A +
Sbjct: 756 GITEFLKNHRSVKSYEF-APQNQGGNGATV 784
>gi|293376245|ref|ZP_06622488.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325845166|ref|ZP_08168475.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
gi|292645137|gb|EFF63204.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325488831|gb|EGC91231.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
Length = 781
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 227/733 (30%), Positives = 362/733 (49%), Gaps = 119/733 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGI 83
L+ L+ I CID + ++D AS +L IR R +++ +S +K+ Q+ + +
Sbjct: 128 LSSLQNAINACID-ETGYVMDSASGELRSIR----RAIQSTESRIKERLNQVVSERRSKL 182
Query: 84 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 143
++T R R V ++A +K G + SSSG TYFMEPK V+ NN E
Sbjct: 183 TDGIVTIRNERYVVPVRADYKNTF-GGTIHDQSSSGNTYFMEPKEVVDLNNKLQEWHVEE 241
Query: 144 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
E IL LT E+ K + ++ + EID FA+ +A+ ++G P ++++
Sbjct: 242 RREIERILRELTEEVKKFVDLLSLNVELLGEIDFMFAKGKYARLINGTRPKINTKG---- 297
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
I + +HPL+ KS V N DI+
Sbjct: 298 --IIRLVAARHPLI----------------DQKSVVAN-------------------DIE 320
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ E +VITGPNTGGKT ++KT+GL +LM++AGL +PA +L FD + ADIGD Q
Sbjct: 321 LGDEYTTIVITGPNTGGKTVTLKTVGLLTLMAQAGLLIPAHESSQLAIFDHVFADIGDEQ 380
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV I+E ++ SL+L DE+G+GTDP EG +LA SIL Y++ R
Sbjct: 381 SIEQSLSTFSSHMTNIVKIMERLTVNSLILFDELGAGTDPKEGASLAISILNYVKVRGAR 440
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+ T+HY +L + NA+ EF++ETL PTYR+L G G SNA I+K +G
Sbjct: 441 TIATSHYPELKAYAYEQDDVINASVEFNVETLSPTYRLLVGVPGRSNAFEISKRLGLKEA 500
Query: 444 IIQRAQKLVERLRPE------RQQHRKSELYQ---------SLMEERRKLESQARTAASL 488
I+ +A+ VE R E + + R +L Q +L+EE +K Q A
Sbjct: 501 ILNQARSYVESERTEMTDLITKLEDRGLQLDQEIQHLQQQNTLVEEMKKEYEQK--LAKF 558
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
AE + +I+ EA + R+A +E +Q+ +L AK D ++D E
Sbjct: 559 EAEREKVLEDIKKEAFESVRQA----KEEAEQIVMDLRQAKKMADLSMKDHE------LT 608
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+++ SL K++E+ A + F N P G++V V SL ++ ++E
Sbjct: 609 EKLTSL-KKAEAKQA---------EQFKKKAQNKQPLKP--GDEVMVLSL-NRQGELIEQ 655
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
+ + +VQ G M+V +K +++ + S +K + K+ +
Sbjct: 656 TKNGEW-MVQLGMMKVNIKPEDLQYLRKSVQKKETKKGQMVHKRN--------------S 700
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERV 723
G + LDLRG R E+A L D+ LA +++ + +IHG GTG +++ V
Sbjct: 701 HVGIQ-------LDLRGERYEDAMLMLDKYFDDVLLAGYQT---ITIIHGHGTGALRQGV 750
Query: 724 LEILRNHPRVAKY 736
+ L+ + VA +
Sbjct: 751 HKYLKQNKHVASF 763
>gi|317129869|ref|YP_004096151.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
gi|315474817|gb|ADU31420.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
Length = 788
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 355/732 (48%), Gaps = 101/732 (13%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKK 72
EL +N LT++E I ID + LD AS L +R ++ R+ E+ L+S+ +
Sbjct: 121 ELAENIVPLTDVERDIKQAIDENGEV-LDSASPALRTLR-QQIRSYESSVRSKLESITRS 178
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + + GI IT R R + +K ++ G+ + S+SGAT F+EP VE
Sbjct: 179 SSGRKMLSDGI----ITIRNDRYVIPVKQEYRGHF-GGMVHDQSASGATLFIEPSSVVEI 233
Query: 133 NNM--EVRLS-NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
NN E R+ EI+ LS+L +E+A+ E+ +++ + EID FA+A ++ +
Sbjct: 234 NNQLREARMKEKQEISRILLALSVLVSEVAE---ELLTIVEVMSEIDFIFAKALYSLEIG 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
G P L+ D I++ +HPL+
Sbjct: 291 GTQPKLNE------DGYIHMAKARHPLI-------------------------------- 312
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
D VPIDI++ E +VITGPNTGGKT ++KT+GL +LM ++GL +P +
Sbjct: 313 ---AKDEIVPIDIEIGKEYSSLVITGPNTGGKTVTLKTVGLLTLMVQSGLQIPCEEGSSA 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H++ IVDIL+ V SLVL DE+G+GTDP+EG AL
Sbjct: 370 AVFQHIFADIGDEQSIEQSLSTFSSHMTNIVDILKHVDHRSLVLFDELGAGTDPTEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL Y+ + + TTHY++L NA+ EF +ETLRPTYR+L G G S
Sbjct: 430 AISILDYVYNVGAKVIATTHYSELKGYAYNREGVMNASVEFDVETLRPTYRLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I++ +G II+ A+ + ++ + SL R+ E + + L
Sbjct: 490 NAFAISRRLGLSDTIIEDAKSHI-----TADTNKIENMIASLESSRKNAEREMEESELLR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
E L++++E E + L + + ++ +Q LN A + + ++ + R
Sbjct: 545 KEAEQLHQQLEKEFEKLQMEREKILQQAEEKAEQSLNKATAEAEKIISELREIQRSNPQI 604
Query: 550 EINSLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
+ + LI K E A +V + + S + P G++V V S K V
Sbjct: 605 KDHQLIEAKKRLEEAKPHLVNKKSNEKPKTSSNSKKKKLIP--GDEVKVLSFDQKGHIVE 662
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+V +D VQ G M+++VK ++I+ + + K Q ++QS S +
Sbjct: 663 QV--NDKEYFVQLGMMKMKVKADDIQYMSSPK--------------QLEKQSLSTVRGKD 706
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKE 721
K LDLRG R + A ++ D LA + S +IHG GTG +++
Sbjct: 707 --------SHVKTELDLRGERYDSAMMEVEKYLDDAVLAGYHQVS---IIHGKGTGALRK 755
Query: 722 RVLEILRNHPRV 733
V ++L+ H V
Sbjct: 756 GVQDLLKTHRNV 767
>gi|422697088|ref|ZP_16755036.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
gi|315174484|gb|EFU18501.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
Length = 788
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 227/735 (30%), Positives = 357/735 (48%), Gaps = 123/735 (16%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L+ IR +R+ E LDS+++ A+ + L+T R R + +
Sbjct: 146 VTDEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 156
K +K + G+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ REI + + ++D A+A + + V P +S +HV F + +HPL
Sbjct: 257 ELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
L +P K+ V DI + E + +VITGP
Sbjct: 311 L---------------DPEKA--------------------VANDIVIGEEYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+K +G D II+ A++++
Sbjct: 456 GYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDR 508
+ + +E+ + L E RRK+ +AR +A+LH E+ + Y+ +E
Sbjct: 512 -DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE------ 563
Query: 509 RAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SA 561
+ KE Q+ ++E N A+ +T++ D QL +KE + A
Sbjct: 564 -----REKELQKARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDA 614
Query: 562 IAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ + H + + V + + G++V V + G + T+++ G VQ
Sbjct: 615 KTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQ 672
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +++ V + ++ P+ AP Q+E + + S E + G +
Sbjct: 673 LGILKMNVSEEDMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ----- 712
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
LDLRG R EEA ++D I A + ++HG GTG ++ + E L+NH V Y
Sbjct: 713 --LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSY 770
Query: 737 EQESPMNYGCTVAYI 751
E +P N G A +
Sbjct: 771 EF-APQNQGGNGATV 784
>gi|424759532|ref|ZP_18187194.1| MutS2 family protein [Enterococcus faecalis R508]
gi|402404409|gb|EJV37027.1| MutS2 family protein [Enterococcus faecalis R508]
Length = 788
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 232/753 (30%), Positives = 363/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKCL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKKAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L+NH V YE +P N G A +
Sbjct: 753 LRTGITEFLKNHRSVKSYE-FAPQNQGGNGATV 784
>gi|384044690|ref|YP_005492707.1| MutS2 family protein [Bacillus megaterium WSH-002]
gi|345442381|gb|AEN87398.1| MutS2 family protein [Bacillus megaterium WSH-002]
Length = 660
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 236/753 (31%), Positives = 366/753 (48%), Gaps = 121/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+E+ I ID +LD AS+ L IR + + R E L+SL++ +AQ +
Sbjct: 3 LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKMLSD 61
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ GI + SSSGAT F+EP+ V NN L
Sbjct: 62 AI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 113
Query: 142 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+++ E+ I L++ AE+A R+ YL+ E+D FA+ ++ + P +
Sbjct: 114 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 170
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ + ++ + KHPL+ + DV
Sbjct: 171 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 191
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
V DI++ + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F +
Sbjct: 192 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 249
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ IVDIL+ V ESLVL DE+G+GTDP EG ALA SIL
Sbjct: 250 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 309
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
+ +R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+
Sbjct: 310 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 369
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
K +G ++I+RA+ + + ++ + SL + RR+ E + A L E L
Sbjct: 370 KRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKL 424
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
++E++ + + + + L K ++ Q + A + + ++ D LR S ++L+
Sbjct: 425 HKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKMSQKN-HALV 479
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTP----------QFGEQVHVKSLGDKLATV 605
KE E ++EA + +D +V S P Q G++V V S G K T+
Sbjct: 480 KEHE-----LIEARKRLED-AVPTLEKSKKKPAVPKKQERTLQAGDEVKVLSWGQK-GTL 532
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
VE +++ VQ G M+++VK+ ++ I +S + P ++ G N
Sbjct: 533 VERVSNNEW-QVQMGIMKMKVKEKDLEYI-SSPKPVETKPLATVK--------GKDYHVN 582
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 721
E LDLRG R E A +D AL R + +IHG GTG +++
Sbjct: 583 LE-------------LDLRGERYENALIRVEKYIDDALLANYPR--VSIIHGKGTGALRK 627
Query: 722 RVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V E L+NH V ++ + S G TV K
Sbjct: 628 GVQEYLKNHRSVKNIRFGEASEGGSGVTVVEFK 660
>gi|374296809|ref|YP_005047000.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
gi|359826303|gb|AEV69076.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
Length = 793
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 218/737 (29%), Positives = 359/737 (48%), Gaps = 100/737 (13%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 77
EL++ +E+KI CI + I D AS L IR + + ++ L ++
Sbjct: 121 ELIECLEAAKRIEDKINLCIVSEEEI-SDNASPALGSIRRQIRHAQNSIKDKLNELIRSP 179
Query: 78 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 137
+ +P++T R R + +K ++ +P G+ + S+SGAT F+EP VE NN
Sbjct: 180 KYQKYMQEPIVTMRGERYVIPVKQEYRTEVP-GLIHDSSASGATLFIEPMAVVEANNAIR 238
Query: 138 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 197
L E AE IL L+ ++A+ E+ ++ + ++D FA+A + + VCP L++
Sbjct: 239 ELKIKEEAEIERILRELSCDVAEIAVELNTNINLLAKLDFIFAKAKLSLEYNCVCPKLNN 298
Query: 198 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 257
+ + +HPLL+ ++
Sbjct: 299 EGKIIIKKG------RHPLLVPKTV----------------------------------- 317
Query: 258 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 317
VPID + + +V+TGPNTGGKT ++KT+GL +LM++AGL++PA L F+ + A
Sbjct: 318 VPIDFWIGEDFHTLVVTGPNTGGKTVTLKTVGLFTLMAQAGLHIPAGEGTVLSVFNKVFA 377
Query: 318 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 377
DIGD QS+EQ+LSTFS H+ IV+ILE + +LVL DE+G+GTDP+EG ALA +IL++L
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENIDDRTLVLFDELGAGTDPTEGAALAMAILEHL 437
Query: 378 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 437
+DR V TTHY+ L ENA EF +ETL+PTY++L G G SNA I+K
Sbjct: 438 KDRGCTVVATTHYSQLKVYAVTTPYVENACCEFDVETLKPTYKLLIGVPGRSNAFAISKR 497
Query: 438 IGFDRKIIQRAQKLV--ERLRPE----------RQQHRKSELYQSLMEERRKLESQ-ART 484
+G +I+RA+ + E ++ E Q + Q L +E K++S+
Sbjct: 498 LGLTDSVIERAKSYLTSEEIKFEDMLLNIEKNLNQSENEKLQAQLLKQEAEKIKSEMENE 557
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
L + + RE +EA+ L A H E + E+ ++Q ++ EN
Sbjct: 558 KRKLEEKKEKILREAREEARKLLLNAKH----EADNILSEMR--RIQ-----KERENIQS 606
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDK 601
+A+E+ +K S I I +A SV NT P+ G+ V + +L +
Sbjct: 607 QKAAEEMRLKLK---SNIDTIEDALSK----SVMPKNTLVKPPKNLKPGDSVLIVNLNQR 659
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
TV+ P D +VQ G M++ V N++ + K ++ ++G
Sbjct: 660 -GTVITPPDRDGEAIVQVGIMKINVHITNLKLVDEQK--------------EQIYKTGVG 704
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
S +A + + +D+RGM +++A +D L + +IHG GTG++
Sbjct: 705 EISVSKA------KNISSEIDVRGMPLDDALEAIDKYLDDVVISGLPEICIIHGKGTGIL 758
Query: 720 KERVLEILRNHPRVAKY 736
+ + + L+++ RV+ Y
Sbjct: 759 RNGIHQYLKSNKRVSSY 775
>gi|410456530|ref|ZP_11310390.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
gi|409927914|gb|EKN65039.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
Length = 785
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 238/754 (31%), Positives = 356/754 (47%), Gaps = 100/754 (13%)
Query: 14 SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSL 69
S L+E ++ LT+LE++I ID + +LD AS+ L +R + + N E L+S+
Sbjct: 117 SILMEQVERIIPLTDLEQEIKHAID-ESGEVLDSASDLLRTLRHQLRSNESRVREKLESM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
++ A + I +T R R + +K ++ GI + S+SG T F+EP+
Sbjct: 176 IRSSNASKMLSDAI----VTIRNDRFVIPVKQEYRGHY-GGIIHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN + E E IL+ L+A +A+ E E+K +++ + +D FA+A F + +
Sbjct: 231 VQLNNQLQDIRVKEQLEIDRILTELSANVAEYENELKVIVEILANLDFIFAKARFGKKIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P+++++ +S + +HPL+ P+ V N
Sbjct: 291 ASKPLMNNEGRISLYKA------RHPLI----------------PIDEVVAN-------- 320
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
DI + E +VITGPNTGGKT ++KTLGL SLM++AGL +PA + L
Sbjct: 321 -----------DIMLGNEFTTIVITGPNTGGKTVTLKTLGLCSLMAQAGLQVPALDGSEL 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
FD + ADIGD QS+EQ+LSTFS H+ IVDIL V SLVL DE+G+GTDP EG AL
Sbjct: 370 AVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDILNSVDFNSLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + R + TTHY +L NA+ EF +ETL PTY++L G G S
Sbjct: 430 AISILDEVHKRGARVIATTHYPELKAYGYNREGVLNASVEFDVETLSPTYKLLLGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G +IQ A+ V SE + + LES R A
Sbjct: 490 NAFEISKRLGLSDWVIQAARSHV------------SEDTNQIDKMIASLESSKRQAEEEQ 537
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA- 548
E D ++ E DL ++ K+ +++ A +D Q+ E +RD
Sbjct: 538 MEARDYLKQAEKLHLDLQKQMIEFYEKKDSMLEKAAEKAADIVDEAKQEAEQVIRDLRKM 597
Query: 549 -DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
E ++ IKE E +++A R D + P+ + V++ + +K+ T
Sbjct: 598 RTEKHAEIKEHE-----LIDAKRRLQDAA----------PEIKKSVNLANKKNKMHTY-- 640
Query: 608 VPGDDDTVLV--QYGKMRVRVKKNNIR---PIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
+PGD+ VL Q G + +V N + I K K KQ E R
Sbjct: 641 MPGDEVKVLTFDQKGTLLEKVSANEWQVQIGILKMKVKEKDMEYMGTPKQVETRPM---- 696
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
A R K LDLRG R E A +++ I A S + +IHG GTG ++
Sbjct: 697 -----AIVQGRESVVKLELDLRGERYENALLKVEKYIDDALLSSYPRVSIIHGKGTGALR 751
Query: 721 ERVLEILRNHPRVAK--YEQESPMNYGCTVAYIK 752
+ V E LRNH V K + + G T+ K
Sbjct: 752 QGVQEYLRNHRSVKKIRFGEAGEGGSGVTIVEFK 785
>gi|358068271|ref|ZP_09154738.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
gi|356693530|gb|EHI55204.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
Length = 846
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 212/719 (29%), Positives = 353/719 (49%), Gaps = 84/719 (11%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--I 83
LT+++ +I CI + I + + EL++ + N+ S + V + ++ +
Sbjct: 187 LTQIKNEIARCILSETEISDNASPRLFELVKQHK-----NVQSKMHTVLQSLLESHKEYL 241
Query: 84 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 143
+IT + C+ I+A K + GI + S+SG+T F+EP + FNN E+R E
Sbjct: 242 MDSIITMKDGAYCLPIRADFKNKV-SGIVHDHSASGSTIFIEPMAVIRFNN-ELREIEIE 299
Query: 144 IAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
+E IL L++ I +I + + +D +A+A + M P+ + + +
Sbjct: 300 KQQEIDNILEDLSSLIRPYIDDINENIKNMAHLDFVYAKAHLSDAMSASMPVFNDRFY-- 357
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
INI+ +HPL+ P + VPI+I
Sbjct: 358 ----INIKEGRHPLI----------------P-------------------DNIVVPINI 378
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ + ++VITGPNTGGKT S+KT+GL +LM ++GL++PA LP F + ADIGD
Sbjct: 379 SIGDDYSLLVITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSSLPVFKNVYADIGDE 438
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IVDI++ R SL L DE+G+GTDP+EG ALA ++L +L +
Sbjct: 439 QSIEQSLSTFSGHMKNIVDIIKKADRSSLCLFDELGAGTDPAEGAALAIALLSHLHKKGA 498
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ T+HY++L ENA EF++ETLRPTYRI+ G G SNA I++ +G
Sbjct: 499 TVLATSHYSELKIFALNTPGIENACCEFNVETLRPTYRIIIGIPGKSNAFAISRKLGLPE 558
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II A+K + E + E+ + +R +E++ + + AEI L + E +
Sbjct: 559 YIIDEAKKNI-----EDENMSFEEILTKIEHDRFVIENEKKEINNYKAEIEKLKQTYEKK 613
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ ++ K + + L+ AK DT + + N+L SA I S +++ +
Sbjct: 614 NSRIQEIRENILEKARLEAENILSLAKETADTTINNI-NKL--TSAKGIGSELEKEREKL 670
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
++ +S+ N++ G+ V+V S+ K TV +P D + VQ G
Sbjct: 671 RESLKKLEKKPALKISKKNSAKKPKHLRCGDSVYVHSMNLK-GTVSSLPNDKGKLYVQMG 729
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY-GPRVQTSKN 679
+R +V ++I I ++ PA ++ +GS G+S +AS+ P +
Sbjct: 730 ILRSQVSLDDIELIDDT-------PADNVK-----VYAGSKGASLMKASHISPEI----- 772
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ GM V+EA LD L A + +IHG GTG +++ + L+ P + Y
Sbjct: 773 --NVIGMNVDEACSALDKYLDDALLSHLKYVRIIHGRGTGALQKGIHAYLKKQPYIKSY 829
>gi|320162401|ref|YP_004175626.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
gi|319996255|dbj|BAJ65026.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
Length = 808
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 227/732 (31%), Positives = 363/732 (49%), Gaps = 91/732 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
ILD ASE L +R E K E L + L+ + A + LIT+R R + ++A
Sbjct: 143 ILDSASETLARLRREVKVAFERLMTRLEHMVNDPRIAPMLQDSLITQRNGRYVIPLRAEF 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIA 159
K + I + SSSGAT F+EP V+ NN +++R+ + EE IL+ L+ ++
Sbjct: 203 KGQV-RSIIHDQSSSGATLFVEPLAVVDLNNEWHELQLRVRD----EERRILAELSDQVG 257
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ L + + D A A A +A+ + P+L H + HP G
Sbjct: 258 AHFEALAALTEALARFDFALACAKYAEDLRASEPVLVRYRHPARPD--------HP---G 306
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
S++R + A +P TV VPID+ ++ +T VVITGPNTG
Sbjct: 307 STIRLIQARHPLLDP---------QTV-----------VPIDVDLDEDTFCVVITGPNTG 346
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM+++GL++PA++ L F+ + ADIGD QS+EQ+LSTFSGHI I
Sbjct: 347 GKTVTLKTVGLLALMAQSGLHIPARSGSELSVFENVFADIGDEQSIEQSLSTFSGHIKNI 406
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
IL + +LVL DE+G+GTDP EG ALA +IL ++ ++ ++ THY +L
Sbjct: 407 SRILRRANTHTLVLFDELGAGTDPQEGAALARAILAHMVEKRIPCLIATHYPELKIFAHN 466
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRP 457
NA+ EF L TLRPTY + G G SNAL IA +G D II++A+ + E LR
Sbjct: 467 TPGVINASMEFDLNTLRPTYHLTLGLPGRSNALAIASRLGLDPVIIEKARAEISPEELRA 526
Query: 458 E-------RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 510
E RQ+ + +E+R++E L AE+ +IE+E + L +
Sbjct: 527 ENLLNEIHRQRDAARRARERAEKEQREVE-------RLRAELAARLEKIEEERQRLLEKV 579
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIVEA 568
+E + +++E+ + Q+ Q E LR+ S +L++ + +A+
Sbjct: 580 REEAEQEAEALRREVEEVRRQLMRARQPLEALQPLREKS----EALVENARTAL------ 629
Query: 569 HRPDDDFSVSETNTSSFTPQF----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
S ++ PQ G++V V+SLG + V+ G++D VQ G +RV
Sbjct: 630 ------VSTPAAGETTLPPQHPFRAGDKVRVRSLG--MQGVITALGEEDAE-VQVGNLRV 680
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
R + ++++ +K+AA PA ++ R + + E + Y P + +DLR
Sbjct: 681 RARLSDLQ---KPGQKDAAEPAAPVKAAARGRTTLKTAAPAEVSVYYP---SPGMEIDLR 734
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QES 740
G E+A L+ L A + +IHG GTG +++ + + L P V + ++
Sbjct: 735 GQLAEDALDALERYLEAAVLAGLPFVRIIHGKGTGKLRQVIRQALDASPHVKSHSPGEDR 794
Query: 741 PMNYGCTVAYIK 752
G T+A +K
Sbjct: 795 EGGEGVTIARLK 806
>gi|323485118|ref|ZP_08090470.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
gi|323401548|gb|EGA93894.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
Length = 800
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 224/724 (30%), Positives = 350/724 (48%), Gaps = 92/724 (12%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 73
E+ + LT + +I CI + + D AS L +R K R L+S+L
Sbjct: 120 EMFRTLEPLTPVNTEIKRCIISED-DVSDDASPGLSKVRKSMKIIAGRVHTQLNSVLNSS 178
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
A + +A +IT R R C+ +K+ +K +P G+ + SS+G+T F+EP V+ N
Sbjct: 179 RAYLQEA------VITMRDGRYCLPVKSEYKNQVP-GMVHDQSSTGSTIFIEPMAVVKLN 231
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L E E +L+ L+ E+ I ++ + ++D FA+A ++ + P
Sbjct: 232 NELRELEIQEKREIEFVLTALSGELVPYTDTIALNLELLAKLDFIFAKAALSRHFNCTEP 291
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+++ + INI+ +HPLL +P +
Sbjct: 292 KFNNRRY------INIKDGRHPLL---------------DPKQV---------------- 314
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VPI+I + + ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F+
Sbjct: 315 ----VPINIYLGDQFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFE 370
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV ILE SL L DE+G+GTDP+EG ALA ++
Sbjct: 371 EVFADIGDEQSIEQSLSTFSAHMTNIVSILEQADSNSLCLFDELGAGTDPTEGAALAIAV 430
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L +L + + TTHY++L ENA EFSLETLRPTYR+L G G SNA
Sbjct: 431 LSFLHNMSCRTMATTHYSELKVYALTTPGVENACCEFSLETLRPTYRLLIGIPGKSNAFA 490
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
I+K +G II+ A+K + E++ +L L + R +E + AS ++
Sbjct: 491 ISKKLGLPDYIIEDAKKHI-----EQEDESFEDLLADLEDNRVTIEKERAEIASYKEQVA 545
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 553
L R +E + + + + K ++ Q+ L AK DT Q + R A +N
Sbjct: 546 ILKRRLEQKEERFSEQKDKMLEKAREEAQRILQDAK---DTADQTIRSINRLAKESGVNK 602
Query: 554 LIKESESAIAAIVE------AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
++ S + + A +P +V + S + + G+ V V S+ K TV
Sbjct: 603 ELEAERSKLRNKLSDVDKKLAVKP----AVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSS 657
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNE 666
+P + VQ G +R V NI+ + K + P P QSG S N+
Sbjct: 658 LPNAKGDLYVQMGILRSLV---NIKDLELVDEKTISGPGIP---------QSGPRSSGNK 705
Query: 667 EASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
S +++ SK+ ++L GM V+EA LD L A + V+HG GTG +
Sbjct: 706 NGSGSSKIKMSKSFSISPEINLIGMTVDEAVPALDKYLDDAYLAHLPQVRVVHGRGTGAL 765
Query: 720 KERV 723
K V
Sbjct: 766 KAGV 769
>gi|188586428|ref|YP_001917973.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351115|gb|ACB85385.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 796
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 226/753 (30%), Positives = 372/753 (49%), Gaps = 91/753 (12%)
Query: 14 SPLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
S L+ L N L EL++KI + K D AS +L IR + K+ L S +K
Sbjct: 118 SSLISKLPELNHLKKELDDKIDENGEVK-----DSASVNLRNIRQKIKK----LQSQVKT 168
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
+I Q+G + ++T R R V +KA ++ ++P GI + SSSG T ++EPK V
Sbjct: 169 SVNRILQSGEKYLQDKIVTMRYDRYVVPVKAEYQNMVP-GIIHDQSSSGMTVYIEPKEVV 227
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN + E +E IL L+ +I ++ + ++E+D A+ ++ M+
Sbjct: 228 EKNNELRQAKREEHSELEKILQGLSQKIKGYHYQLHDSLQILVELDFILAKGSLSRRMNA 287
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
L+ + + I+G KHPLL
Sbjct: 288 REAELNQEKRLEI-----IKG-KHPLL--------------------------------- 308
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
+ +P+D+K+ E +VITGPNTGGKT S+K +GL +LM+++GL++PA+ +
Sbjct: 309 ---GEDAIPVDVKLGDEFNTMVITGPNTGGKTVSLKMVGLFTLMTQSGLHIPAERGTEMG 365
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F+ + ADIGD Q +EQ+LSTFS H+S IV I++ + ESL+L+DE+G+GTDP+EG ALA
Sbjct: 366 VFEQVFADIGDEQDIEQSLSTFSSHMSNIVKIVDHANSESLILLDELGAGTDPTEGSALA 425
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
S+L++ + ++ TTHY L ENA+ EF ETL PTY +L G G SN
Sbjct: 426 MSLLEHFHNLGCRSIATTHYTQLKSFAHAREGVENASVEFDEETLEPTYNLLIGVPGKSN 485
Query: 431 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
A I++ +G KII A+ + E + E EL SL E+ + +
Sbjct: 486 AFVISRRLGLSDKIISNAKSFLADEEIEVE-------ELITSLTEKEKSSQKMKEELERE 538
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-- 546
A++ + ++E E K++ R+ + K +Q ++ ++ AK +D E L++A
Sbjct: 539 RAKVEQVKAQLEQERKEISRKKDEVLQKARRQAEEIISDAK-------RDAEESLKEARK 591
Query: 547 -SADEINSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQF---GEQVHVKSLGDK 601
+ + + + E S + + H+ + + ++ +P+ G V++ +L DK
Sbjct: 592 IAEKKSHKEMAEVSSKVRDKLSGHQQKLREELMDSADSVPLSPEKLKPGLTVYISNL-DK 650
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+++V D VQ G M+V V ++I P+ + K+ + + + + S S
Sbjct: 651 EGQILQVNHDKGEAEVQVGIMKVNVNFSDI--FPSEEEKSGSTFSGNV-----NSSSSST 703
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
G N A R+ T LD+RG RVEEA +Q+D L A + + +IHG GTG +
Sbjct: 704 GRGNVFAGKKERIST---ELDIRGERVEEAINQVDKYLDDALVAGLAEIRIIHGKGTGNL 760
Query: 720 KERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
++ + L HP V++Y + G V +K
Sbjct: 761 RKGIQFHLEGHPMVSQYRLGNRQEGGEGVTVVK 793
>gi|352684296|ref|YP_004896281.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
gi|350278951|gb|AEQ22141.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
Length = 790
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 205/681 (30%), Positives = 334/681 (49%), Gaps = 91/681 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T R R + IK ++ P GI + SSSGAT F+EP V NN + E AE
Sbjct: 186 LVTMREDRYVIPIKQEYRLNFP-GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL LT+ + I + V ++DL A+A +A+ + P++ H+
Sbjct: 245 VERILRTLTSHVGAEADHILESLAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI--- 301
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
++G +HPLL S+ VP+DI++
Sbjct: 302 --VKG-RHPLLEQESI-----------------------------------VPLDIELGQ 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++ITGPNTGGKT ++KT+GL +LM++AGL+LPA+ P F + ADIGD QS+E
Sbjct: 324 DFTTLLITGPNTGGKTVALKTVGLFALMAQAGLFLPAE-EAIFPVFSGVYADIGDEQSIE 382
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFSGH+ ++ I+ + LVL+DE+ GTDP+EG ALA +++++ L ++
Sbjct: 383 QSLSTFSGHMKNMISIIREATDRDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIM 442
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L + +NA+ EF ETLRPTYR+L G G SNA I++ +G I+
Sbjct: 443 TTHYSELKTFAYEHEGMQNASVEFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILD 502
Query: 447 RAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A+ + ++H E + Q+L ERR+ ES+ +L E L +++ E
Sbjct: 503 EARTFIN------ERHSNMERVLQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTR 556
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
L++ + K + + A+ + ++++ Q + ++ L + S A++
Sbjct: 557 LEKSRNDILRKAREDADELYRNARRESQGILKELRAQQNLVESAKVERLAEMSRKALS-- 614
Query: 566 VEAHRPDDDFSVS------ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+FS+S +S G+ V VK+LG + + V G D TV +
Sbjct: 615 -------KNFSISGRTEPEGQGLTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGV 666
Query: 620 GKMRVRVKK---NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
KM V +K +P+ K L+K S+GS +E + + Q
Sbjct: 667 MKMNVSMKDCILTKAQPVSPQKTHRT------LKK--------SSGSRHE--FFVKKAQD 710
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
+ D+RG V+EA +D A+ A ++HG GTG++++ +L+ L+ HP V
Sbjct: 711 TSVQTDVRGKTVDEAIPDVDKAIDDALLAGMDRFRLVHGKGTGMLRKGLLDYLKQHPNVK 770
Query: 735 KYEQESPMN---YGCTVAYIK 752
K E +P+N +G T+ Y+K
Sbjct: 771 KTEM-APLNEGGFGATIVYVK 790
>gi|384246104|gb|EIE19595.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 500
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 243/439 (55%), Gaps = 55/439 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L L +I CI +LD AS L RA R++N+ L S +++ A + + G ++
Sbjct: 40 LPGLASQIWRCISAGDGRVLDGASSALADTRARRQQNLGELRSTIEEWARSMHRLGAAER 99
Query: 86 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+ RR R+CV +KA + LP G + L SS+GAT++M+P V NN E L+ E
Sbjct: 100 AQVVVRRDRLCVALKAGRQSDLPKGSVTLATSSTGATFYMDPAPTVPLNNAEAVLAAQER 159
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL+ L+A +A + I ++D V +D+ AR A W GV
Sbjct: 160 EEVARILAHLSAAVADNAARIWQVLDAVTALDICSARGRHAVWCGGV------------- 206
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
LR L + N GS+ + + P +D V
Sbjct: 207 ----------------RLRFLLPEVAAQN-------------GSV-QVLQPPPRAVDFTV 236
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK-----------NHPRLPWFD 313
RVV +TGPNTGGKTAS+K LGLA+LM KAGL+LP + + P + WFD
Sbjct: 237 PAGVRVVTVTGPNTGGKTASLKALGLAALMPKAGLFLPLEPTPGKGPPTPFDAPAVAWFD 296
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
++LAD+GD QSL+Q+LSTFSGHI R+ IL ++R SLVL+DE GSGTDP+EG ALA+++
Sbjct: 297 MVLADVGDGQSLQQSLSTFSGHIRRVRAILAALTRRSLVLLDEAGSGTDPAEGAALASAL 356
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L L DR L + TTH+A L L D+RF NA EF L +LRPTYR++WGS G SNAL
Sbjct: 357 LAALADRAALTLATTHHASLKDLAANDSRFCNAGVEFDLASLRPTYRLIWGSVGASNALA 416
Query: 434 IAKSIGFDRKIIQRAQKLV 452
+A+ +GFD ++ A+K+
Sbjct: 417 VAEGLGFDPLVVAEARKVC 435
>gi|317132907|ref|YP_004092221.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
gi|315470886|gb|ADU27490.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
Length = 796
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 226/729 (31%), Positives = 349/729 (47%), Gaps = 102/729 (13%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLI 88
LEEKI I + D AS +L IR +R + + L K+ A + + ++
Sbjct: 131 LEEKITAAI-LPEEEMADTASAELADIRRNIRRAGQRVREQLDKMVHSQRYAKFLQEAIV 189
Query: 89 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 148
T+R R + ++A ++ +P G+ + S+SGAT F+EP VE +N L E E
Sbjct: 190 TQRGGRFVIPVRAEYRSEVP-GLVHDTSASGATLFIEPMAVVEADNELKVLYVKEEKEIE 248
Query: 149 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 208
IL+ L+AE++ I + ++D FARA + M P H++ D I+
Sbjct: 249 RILAALSAEVSTFADVIAQDVRTAEKLDFVFARARLSFAMKAGVP------HLADDGIID 302
Query: 209 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 268
+ +HPLL P D VPIDI++
Sbjct: 303 LHRARHPLL----------------P-------------------PDQAVPIDIRLGEPF 327
Query: 269 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 328
+VITGPNTGGKT ++KTLGL +LM+ +GL +P + +L +F+ +LADIGD QS+EQ+
Sbjct: 328 DTLVITGPNTGGKTVALKTLGLITLMAMSGLAVPVADDSKLSFFEQVLADIGDEQSIEQS 387
Query: 329 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 388
LSTFS H++ I+ IL SLVL+DE+GSGTDP+EG ALA +IL++LR R TT
Sbjct: 388 LSTFSAHMTNIIGILHTCGTRSLVLLDELGSGTDPTEGAALAVAILEHLRLRGAKVAATT 447
Query: 389 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 448
HYA+L + EN + EF + TLRPTYR+L G G SNA I+ +G II RA
Sbjct: 448 HYAELKLYALETPGVENGSCEFDVATLRPTYRLLIGVPGRSNAFAISARLGLYESIIVRA 507
Query: 449 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 508
+ L+ + R ++ + L + R LE AA AE + E + EA
Sbjct: 508 KALL-----SNEDTRFEQVVEGLEKNRLALE-----AARTEAEALRRQAEQDREA----- 552
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVV-----------QDFENQLRDASADEINSLIKE 557
AAHL+ + ++EL A+VQ +V D + + +A++ +L +
Sbjct: 553 -AAHLRDQMENAREKELERARVQAQAMVGRARAEAQALLTDIDELRKMEAAEKAEALREL 611
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDT 614
++S + A ++A D + P + G++V + + D+ TV+
Sbjct: 612 AKSTVGARLDALEKTADPVRKKQAQPYRLPRRLRSGDRVLIHDI-DQKGTVLSTADASGM 670
Query: 615 VLVQYGKMRVRVKKNNIRPIPNSK-----RKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
V VQ G ++ RV ++++R + N + R A A LR
Sbjct: 671 VEVQAGIIKTRVPESDLRLLENERVTVQARAGGARLARTLRGTH---------------- 714
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
++ +DLRG V+EA +D I A S S + +IHG GTG ++ V + L
Sbjct: 715 -----TAAQTEIDLRGQTVQEALEAVDKFIDDARLASLSQVSIIHGKGTGALRTAVQQHL 769
Query: 728 RNHPRVAKY 736
+ + V +
Sbjct: 770 KGNRSVKSF 778
>gi|323694011|ref|ZP_08108195.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|355625337|ref|ZP_09048200.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
gi|323501947|gb|EGB17825.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|354821364|gb|EHF05752.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
Length = 800
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 224/724 (30%), Positives = 350/724 (48%), Gaps = 92/724 (12%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 73
E+ + LT + +I CI + + D AS L +R K R L+S+L
Sbjct: 120 EMFRTLEPLTPVNTEIKRCIISED-DVSDDASPGLSKVRKSMKIIAGRVHTQLNSVLNSS 178
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
A + +A +IT R R C+ +K+ +K +P G+ + SS+G+T F+EP V+ N
Sbjct: 179 RAYLQEA------VITMRDGRYCLPVKSEYKNQVP-GMVHDQSSTGSTIFIEPMAVVKLN 231
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L E E +L+ L+ E+ I ++ + ++D FA+A ++ + P
Sbjct: 232 NELRELEIQEKREIEFVLTALSGELVPYTDTIALNLELLAKLDFIFAKAALSRHFNCTEP 291
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+++ + INI+ +HPLL +P +
Sbjct: 292 KFNNRRY------INIKDGRHPLL---------------DPKQV---------------- 314
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VPI+I + + ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F+
Sbjct: 315 ----VPINIYLGDQFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFE 370
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV ILE SL L DE+G+GTDP+EG ALA ++
Sbjct: 371 EVFADIGDEQSIEQSLSTFSAHMTNIVSILEQADSNSLCLFDELGAGTDPTEGAALAIAV 430
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L +L + + TTHY++L ENA EFSLETLRPTYR+L G G SNA
Sbjct: 431 LSFLHNMSCRTMATTHYSELKVYALTTPGVENACCEFSLETLRPTYRLLIGIPGKSNAFA 490
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
I+K +G II+ A+K + E++ +L L + R +E + AS ++
Sbjct: 491 ISKKLGLPDYIIEDAKKHI-----EQEDESFEDLLADLEDNRVTIEKERAEIASYKEQVA 545
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 553
L R +E + + + + K ++ Q+ L AK DT Q + R A +N
Sbjct: 546 ILKRRLEQKEERFSEQKDKMLEKAREEAQRILQDAK---DTADQTIRSINRLAKESGVNK 602
Query: 554 LIKESESAIAAIVE------AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
++ S + + A +P +V + S + + G+ V V S+ K TV
Sbjct: 603 ELEAERSKLRNKLSDIDKKLAVKP----AVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSS 657
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNE 666
+P + VQ G +R V NI+ + K + P P QSG S N+
Sbjct: 658 LPNAKGDLYVQMGILRSLV---NIKDLELVDEKTISGPGIP---------QSGPRSSGNK 705
Query: 667 EASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
S +++ SK+ ++L GM V+EA LD L A + V+HG GTG +
Sbjct: 706 NGSGSSKIKMSKSFSISPEINLIGMTVDEAVPALDKYLDDAYLAHLPQVRVVHGRGTGAL 765
Query: 720 KERV 723
K V
Sbjct: 766 KAGV 769
>gi|312793836|ref|YP_004026759.1| muts2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180976|gb|ADQ41146.1| MutS2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 786
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 211/704 (29%), Positives = 356/704 (50%), Gaps = 88/704 (12%)
Query: 44 ILDRASEDLELIRAERKRNME-----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E L+ +++ Q F + +P+IT R ++ +
Sbjct: 141 ILDTASPRLKEIR-DRIRRLEARIRDELNKMIRDPKIQRF----LQEPIITVRGDKLLLP 195
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAE 157
+KA HK + GI + S++G+T F+EP VE +N ++R++ SE EE IL L+
Sbjct: 196 VKAEHKDSIK-GIIHDQSATGSTLFVEPFVCVEISN-QIRVARSEEKEEIERILQELSQL 253
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
I+ S EIK + + E+D+ F +A +A PIL++ + IN++ +HPL+
Sbjct: 254 ISDSYNEIKQNFESLSELDILFTKARWAHQFRASKPILNTAGY------INLKKARHPLI 307
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+ + E V+VITGPN
Sbjct: 308 EKEKV-----------------------------------VPIDVHLGKEFDVLVITGPN 332
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L++++G++LPA + F I ADIGD QS+ Q+LSTFS H+
Sbjct: 333 TGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFSKIFADIGDEQSIIQSLSTFSAHMK 392
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + +LVL+DEIGSGTDP EG ALA +IL++L + V TTHY +L
Sbjct: 393 NIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAILKFLFKKGSKVVATTHYGELKTFA 452
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
++ RFENA+ EF + TL+PTYR+L G G SNAL I+ ++G +I++ A+ + +
Sbjct: 453 QQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLKEEIVELAKSYMSKKTL 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E +++ + +R++LE A L E +L + +E+E + + +K +
Sbjct: 513 EL-----TDIINEMERKRKELEETLENANKLKIEAENLKKTLEEERRRFEAEKQRIKERA 567
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+++ ++ F + D V + F+ + A + + ++K+ E + + S
Sbjct: 568 SREARE---FVQRVEDEVEKLFKELRKIAESLKEKEMLKQLEEKKREYENLVKSIEQASQ 624
Query: 578 SETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
E S P+ G++V+VKS D V +P + V+ G M++ V +++ I
Sbjct: 625 KEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPDSKGNLTVRIGIMKLSVNISDVFEI 683
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+E+ + + SS + + + S+D+RG ++A +
Sbjct: 684 ------------------EEETATKNLVSSKKAVEVNQK--SIDMSIDVRGKTSDDAILE 723
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 724 VDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 767
>gi|291524453|emb|CBK90040.1| MutS2 family protein [Eubacterium rectale DSM 17629]
Length = 792
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 217/716 (30%), Positives = 349/716 (48%), Gaps = 75/716 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + + + L K+ + ++T R R C+ +KA
Sbjct: 145 IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTRTYLQDAVVTMRDGRYCLPVKAEA 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ + SS+G+T F+EP V NN L E E IL+ L+ ++A +
Sbjct: 205 KGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAALSDKVAMNAA 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + + E+D FA+A A+ +GV P +++ H INI +HPLL
Sbjct: 264 ALEQDYEILSELDFIFAKANLAKSYNGVAPEFNTEGH------INIRKGRHPLL------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
D +N VPID+++ E + ++ITGPNTGGKT
Sbjct: 312 --------------DAKNV---------------VPIDVRLGEEYKQLIITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 SLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E SL L DE+ SGTDP+EG ALA SIL L + + TTHY++L
Sbjct: 403 EKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQYGAITMATTHYSELKVYALSTDGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF++ETL PTYR+L G G SNA I+ +G D II+ A+ R
Sbjct: 463 ENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGLDENIIEDAKS-----RINDNDLD 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+L SL +R+ +E + S AEI L +++E++ + +D+ + + ++ +
Sbjct: 518 FEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLEEKNERIDKSKDKILREANEEAYK 577
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
L AK D +++F N+ A ++ + KE + + + + D + +
Sbjct: 578 ILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSALRDKMNDKEKKLSDIKKNTAKAN 635
Query: 584 SFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
P+ G+ V V SL K TV +P + VQ G +R V N++ + +
Sbjct: 636 HKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYVQMGILRSLVNINDLVLLNDD--- 691
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 699
+PA ++ G +GS + + + + ++L G +EA LD L
Sbjct: 692 --VSPA---------KKYGGSGSKIKMSK----SMSVSSEINLIGKTTDEALALLDKYLD 736
Query: 700 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A S + ++HG GTG +++ V +L+ +A+Y + + G T+A K
Sbjct: 737 DAYIAHLSSVRIVHGKGTGALRKAVHGLLKRTKTIAEYHLGEFGEGDAGVTIATFK 792
>gi|225574101|ref|ZP_03782712.1| hypothetical protein RUMHYD_02166 [Blautia hydrogenotrophica DSM
10507]
gi|225038701|gb|EEG48947.1| MutS2 family protein [Blautia hydrogenotrophica DSM 10507]
Length = 793
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 220/732 (30%), Positives = 351/732 (47%), Gaps = 92/732 (12%)
Query: 19 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVA 74
+ +N LT L +I CI + I D AS L+ +R K R L+SLL A
Sbjct: 121 MFQNLEPLTPLSSEIRRCILSEEEIS-DDASPGLKQVRRSMKITNDRIHSQLNSLLNGSA 179
Query: 75 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 134
Q G +IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN
Sbjct: 180 RSYLQDG-----VITMRNGRYCLPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNN 233
Query: 135 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
+L E E +LS L+ + A+ + + ++ ++E+D FARAG A +
Sbjct: 234 DLRQLEIQEQKEIEIVLSDLSEQAAQYQEVLTDNLNILIELDFIFARAGLALEHN----- 288
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
+S+ + D I ++ +HPL+ +
Sbjct: 289 -ASEPQFNTDGKIQLKKARHPLIHKKQV-------------------------------- 315
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
VPIDI++ + ++V+TGPNTGGKT S+KT+GL +LM ++GL++PA +H L F+
Sbjct: 316 ---VPIDIRLGDDFDLLVVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPAGDHSVLSVFEE 372
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 374
+ ADIGD QS+EQ+LSTFS H++ +V LE + +SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 373 VYADIGDEQSIEQSLSTFSSHMTNVVSFLEKATDKSLVLFDELGAGTDPTEGAALAIAIL 432
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
+L + + TTHY++L ENA+ EF +ETLRPTYR+L G G SNA I
Sbjct: 433 SHLHRQGIRTMATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLIGVPGKSNAFAI 492
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
+ +G II++A++ + Q ++ L R LE + AEI
Sbjct: 493 SSKLGLPDFIIEKAKEQI-----SEQDESFEDVISKLEASRITLEKEQLEIQQYKAEIES 547
Query: 495 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--ASAD--- 549
L +++E++ + D R + + +Q + L AK D ++ F ++ ++AD
Sbjct: 548 LKKQLEEKQEKFDARKEKIIREANEQAHEILREAKEYADQTMKTFHKFQKEHISTADVEN 607
Query: 550 ---EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
+ + + E +A + +P S+ + G V + S+ + TV
Sbjct: 608 ERQNLRKKMSKLEKNMAMKPKKSQPGKRLRPSDLS-------IGASVKIISM-NLTGTVS 659
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
P + VQ G R +V +++ + P + + + + S SA S E
Sbjct: 660 TKPDAKGNLFVQTGIFRTQVHLSDLELVDEVV---VNTPLMQRTRAGKIKMSKSANVSTE 716
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
++L G V+EA +LD L A S + ++HG GTG +++ V
Sbjct: 717 --------------INLLGKTVDEAIAELDKYLDDAYIAHLSSVRIVHGKGTGALRKGVH 762
Query: 725 EILRNHPRVAKY 736
LR VA Y
Sbjct: 763 NYLRRQKHVATY 774
>gi|23099579|ref|NP_693045.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
gi|81746034|sp|Q8EPI1.1|MUTS2_OCEIH RecName: Full=MutS2 protein
gi|22777809|dbj|BAC14080.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
Length = 782
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 222/738 (30%), Positives = 369/738 (50%), Gaps = 110/738 (14%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L EL+++ + ELE+ I CID I +D AS L IR+ ++ L+S +++
Sbjct: 115 PILKELVEHITPIRELEQAIKSCIDDHGHI-MDGASSQLRSIRS----SIRTLESRIREK 169
Query: 74 AAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + +IT R R + +K ++ + GI + S+SG T FMEPK V+
Sbjct: 170 LENYTRSNSKMLSDAIITIRNDRYVLPVKQEYRGAI-GGIVHDQSASGQTLFMEPKAVVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN + E E IL L+ ++A E+++ + + ID +AR AQ M
Sbjct: 229 INNSLHESKSKEQLEIERILKDLSNQVASYEQDLLENVKVLTNIDFIYARGKLAQAMKAS 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P ++ + ++ + +HP++ P+ V N
Sbjct: 289 RPKMNDEGYMKMQQA------RHPMI----------------PIDEVVAN---------- 316
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
DI+ E +VITGPNTGGKT ++K +GL +LM+++GL +PA + +P
Sbjct: 317 ---------DIEFGREYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQVPALDGCEMPV 367
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD + ADIGD QS+EQNLSTFS H++ IVDI++ ++ SLVL DE+GSGTDP EG ALA
Sbjct: 368 FDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKITDRSLVLFDELGSGTDPQEGAALAM 427
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
+IL + + + TTHY +L + NA+ EF++ETL+PTYR+L G G SNA
Sbjct: 428 AILDEVISKQARVIATTHYPELKAYGYNREQVVNASVEFNVETLKPTYRLLIGVPGRSNA 487
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
+I+ +G +R I+RA+ L+ + + ++ + L +S +E + E A + E
Sbjct: 488 FDISTRLGLERATIERAKSLI-GVDSKSVENMIASLEKSHLEAEQDYEQ----AHDVLLE 542
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L +E E +++ L K ++ ++ + A+ + +T+V + Q++D++
Sbjct: 543 SEKLRNALEHEWNLFEQKKEKLYKKAEEKAEKAIQKAREEAETIVSEM-RQMKDSAG--- 598
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSET---NTSSFTP--------QFGEQVHVKSLGD 600
+KE E +EA + D+ + T N P Q G+++ + ++ +
Sbjct: 599 ---LKEHE-----WIEARKMLDEAKPNLTKNGNQKQVDPKPVEDRQLQPGDEIKLLTV-N 649
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
++ V+E D + LVQ G M+V+VK+ ++ I K+K +P ++
Sbjct: 650 QMGEVLERVSDKE-YLVQVGIMKVKVKRKDLELIRKPKKKQ-VDPVTTIK---------- 697
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMG 715
SN S LDLRG R E+A +L D+ LA + S +IHG G
Sbjct: 698 --GSNYHVS---------TELDLRGERYEDAILRLEKYVDDVLLAGYPKAS---IIHGKG 743
Query: 716 TGVVKERVLEILRNHPRV 733
TG +++ V E + HPR+
Sbjct: 744 TGALRKGVQEFVGRHPRI 761
>gi|366166669|ref|ZP_09466424.1| MutS2 family protein [Acetivibrio cellulolyticus CD2]
Length = 793
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 215/719 (29%), Positives = 353/719 (49%), Gaps = 86/719 (11%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL-DSLLKKVAAQIFQAGGIDKPL 87
+E+KI CI + I D AS L IR + + ++ D L V + +Q + + +
Sbjct: 132 VEDKINMCIVSEEEI-SDNASPALGNIRRQIRHAQNSIKDKLNDLVRSSKYQKY-MQESI 189
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
+T R R V +K ++ +P G+ + S+SGAT F+EP VE NN L E E
Sbjct: 190 VTLRGDRYVVPVKQEYRSEIP-GLVHDSSASGATLFVEPMAVVEANNTIRELKIKEQTEI 248
Query: 148 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 207
IL L+ ++++ +K ++ + ++D FA+A + + VCP L+ +
Sbjct: 249 ERILQELSCDVSEISMGLKTNVELLAKLDFIFAKAKLSLDYNCVCPKLNREGRTVIKKG- 307
Query: 208 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 267
+HPLL +P VPID + E
Sbjct: 308 -----RHPLL---------------DP--------------------KIVVPIDFWIGDE 327
Query: 268 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 327
+V+TGPNTGGKT ++KT+GL +LM++AGL +PA + F + ADIGD QS+EQ
Sbjct: 328 FDTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLQIPANEGTEISVFGKVFADIGDEQSIEQ 387
Query: 328 NLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 387
+LSTFS H+ IV+ILE V SLVL DE+G+GTDP+EG ALA +IL++L++R V T
Sbjct: 388 SLSTFSSHMKNIVNILENVDSSSLVLFDELGAGTDPTEGAALAMAILEHLKERGCTIVAT 447
Query: 388 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 447
THY+ L ENA EF +ETL+PTY++L G G SNA I+ +G I++R
Sbjct: 448 THYSQLKVYAVTTPHVENACCEFDVETLKPTYKLLIGVPGRSNAFAISNRLGLIDSIVER 507
Query: 448 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
A+ + ++ + ++ S+ + + ES+ R A L E + EIE++ K +
Sbjct: 508 AKGYL-----TSEEIKFEDMLMSIEKNLNQSESEKRQAQVLKLEAEKIRNEIEEQKKRFE 562
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA----SADEINSLIKESESAIA 563
R ++ + ++ ++ L AK + + ++ + R+ S E + + ++ I
Sbjct: 563 DRKENIVKEAREEARRVLLDAKHEAENILSEMRRIQREKESSQSQKEAEDMRLKIKNKID 622
Query: 564 AIVEA-HRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
I EA +P + NT P+ G+ V + +L K TVV +P + +VQ
Sbjct: 623 NIEEALSKP-----IIPRNTLVKPPKNLKPGDSVLIINLNQK-GTVVALPDKNGEAIVQA 676
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G M++ + N++ I K Q + +G G S + +
Sbjct: 677 GIMKINLHITNLKVIDEQK------------AQIKRTGAGEIGVS--------KARNIST 716
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+DLRG+ +E+A +D L A + + +IHG GTG+++ + + L+++ RV Y
Sbjct: 717 EIDLRGLNLEDALENVDKYLDDAVISGLAEVSIIHGKGTGILRSGIHQYLKSNKRVKSY 775
>gi|352518027|ref|YP_004887344.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
gi|348602134|dbj|BAK95180.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
Length = 792
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 225/730 (30%), Positives = 354/730 (48%), Gaps = 112/730 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D ASE+L+ IR R+ ENLD ++ QA + L+T R R + +
Sbjct: 149 VTDEASEELKNIRRNITRSEQSIRENLDGIIHGK-----QARYLSDALVTMRNERYVIPV 203
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE--ETA-ILSLLTA 156
+ ++ + G+ + SSSG T F+EP VE NN RL +IAE E A ILS L+A
Sbjct: 204 RQENRNVF-GGVVHDQSSSGQTLFIEPGQVVEMNN---RLRQYQIAERDEIARILSELSA 259
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ S +EI + + + D A+A FA+ + V P++ +HV F + +HPL
Sbjct: 260 ELVPSRKEIMHNAYVIGKFDFMNAKARFAKDLKAVVPLVDEDNHVYFKQA------RHPL 313
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
L + + + DI + + + VVITGP
Sbjct: 314 LDQTQV-----------------------------------IANDIMIGEDYQAVVITGP 338
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQNLSTFS H+
Sbjct: 339 NTGGKTITLKTLGLLQLMGQAGLPIPAGEDSQMGIFNEVFADIGDEQSIEQNLSTFSSHM 398
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVD+L V + SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 399 TTIVDVLNQVDKNSLVLFDELGAGTDPQEGAALAIAILDDLAAKQAYVMATTHYPELKVY 458
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF ++TL PTYR+L G G SNA I++ +G D+ +I A++++
Sbjct: 459 GYNRPKTVNASMEFDVDTLSPTYRLLIGVPGRSNAFEISRRLGLDQTLIDSAKQIM---- 514
Query: 457 PERQQHRKSELYQSLMEERRK--------LESQARTAASLHAEIMDLYREIEDEAKDLDR 508
+ +E+ L E RRK L + A LH ++ + Y+ ++ ++
Sbjct: 515 -NGESQDLNEMITDL-ENRRKMAETEYLELRNYVSKAKQLHEDLQEAYQYFYEQKEN--- 569
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIV 566
A ++K V+Q AK Q D ++ + LR +KE+E A +
Sbjct: 570 EFAKARSKANDIVEQ----AKDQSDEIITN----LRKIQQQSGQKNVKENELIQAKGELN 621
Query: 567 EAHRPDDDFSVSET-NTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+ +P+D ++ + QF G++V V + + ++ + VQ G ++
Sbjct: 622 QLQQPEDHLKKNKVLQKAKKEKQFKAGDEVLVIPYNQRGELLDKI--GKNQWQVQLGILK 679
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ V + +++ I +K AA P R + SS GP V + LDL
Sbjct: 680 MDVDEEDLQAIAPTKE--AAGPK---------RHVSTLNSS------GPHVSS---QLDL 719
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG E+A +LD L A + ++HG GTG +++ V L+ +P V ++ +P
Sbjct: 720 RGKHYEDALSELDQYLDAAILAGYPQVTIVHGKGTGALRKGVFNYLKKNPSVKNFD-FAP 778
Query: 742 MNYGCTVAYI 751
N G A +
Sbjct: 779 ANQGGNGATV 788
>gi|150015832|ref|YP_001308086.1| recombination and DNA strand exchange inhibitor protein
[Clostridium beijerinckii NCIMB 8052]
gi|229486368|sp|A6LS00.1|MUTS2_CLOB8 RecName: Full=MutS2 protein
gi|149902297|gb|ABR33130.1| MutS2 family protein [Clostridium beijerinckii NCIMB 8052]
Length = 786
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 213/703 (30%), Positives = 352/703 (50%), Gaps = 90/703 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS+ L IR R+++ +S +++ + I ++ + L T R R + +K+
Sbjct: 145 ISDKASQTLCNIR----RSLKEKNSSVREKISSIVRSNSKYLQDDLYTMRGDRYVLPVKS 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT+F+EP V NN L E AE ILS L+ ++ +
Sbjct: 201 EYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELFLKEKAEIERILSDLSLKVKIN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ ++E D FA+ +A ++ + PI V D + +I +HPL
Sbjct: 260 GDSCLSNLKVLVEFDFIFAKGRYASALNAIKPI------VREDGAFSIFSGRHPL----- 308
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+EN D VP DI + E + ++ITGPNTGGK
Sbjct: 309 -----------------IEN-------------DKVVPSDIYLGEEFQTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL +M +GL +PA+++ + +F I ADIGD QS+EQ+LSTFS H++ IV+
Sbjct: 339 TVTIKTVGLLHIMGLSGLLIPARDNSSIAFFKEIFADIGDEQSIEQSLSTFSSHMTNIVN 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++L K
Sbjct: 399 IMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTD 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 458
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E L+ E
Sbjct: 459 GVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFEN 518
Query: 459 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHLKA 515
R+ KS + + E + L QA + E ++ ++A D R A + A
Sbjct: 519 LIRELQEKSIIAKKEAREAKMLRDQAEDLKKKYEEKLEKLENTREKAYMDARREAKEIIA 578
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
+ L + + Q + ++ ++E E I H+ ++
Sbjct: 579 NAKDEADDILKAMRELEKLGIAGGGRQRLEEERKKLKDSLEEREKGI------HKMKENE 632
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
S TN + G + ++ SL K+ +V +P + V V+ G M+V VK ++
Sbjct: 633 GESITNVT-----LGMEAYLPSLNQKV-IIVSMPDNRGEVQVEAGIMKVNVKLKDL---- 682
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
RK ++R+++E + + + ++ +DLRG+ EEA ++
Sbjct: 683 ---RKTQVTKEEKVRRKREVKLN---------------LSNVESRVDLRGLDAEEACYKA 724
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
D L A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 725 DKYLDDAYMANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|302672186|ref|YP_003832146.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
gi|302396659|gb|ADL35564.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
Length = 797
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 322/664 (48%), Gaps = 84/664 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R CV ++A +K + +GI + SSSG+T F+EP VE NN L E AE
Sbjct: 187 VVTMRDDRYCVPVRAEYKSQI-NGIVHDQSSSGSTLFIEPAAVVELNNKIKELVLQENAE 245
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ ++ + IKY D + ++D FA+A +A ++ + P+ + SFD
Sbjct: 246 IEKILLELSLQVGEHAEAIKYNSDIMTDLDFVFAKASYALEINAISPVFNDNH--SFD-- 301
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+ +HPL+ + N + VPID+
Sbjct: 302 --IKKGRHPLI-------------DKNKV----------------------VPIDVYAGK 324
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ +++ITGPNTGGKT ++KT+GL +LM +AGL +PA + L FD + ADIGD QS+E
Sbjct: 325 DFDMLIITGPNTGGKTVTLKTVGLLTLMGQAGLAIPAGDKSELSVFDEVYADIGDEQSIE 384
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ V ILE SL L DE+G+GTDP+EG ALA SIL L +R +
Sbjct: 385 QSLSTFSSHMTNTVKILENADSNSLCLFDELGAGTDPTEGAALAISILNNLHERQVRTLA 444
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L +NA+ EF +E+LRPTYR+L G G SNA I+ +G +II
Sbjct: 445 TTHYSELKIYALNTPGIQNASCEFDVESLRPTYRLLIGIPGKSNAFAISSKLGLSEEIIN 504
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ E++ E ++ +L L + R+ +E++ A E+ +L E+ + L
Sbjct: 505 AAK---EQIGTEDKKFE--DLLSDLEKSRKTIENERLEIAQYKREVEELKAELASKTDKL 559
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-------INSLIKESE 559
D++ + + ++ + L AK D ++ F +A+ + + I
Sbjct: 560 DKQKEEILRQANEEARNILQEAKDLADETIRTFRKAGPNATMQDLERARTNVGQKISAKN 619
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
AI+A EA + S + GE V + S+G + T+ P D + VQ
Sbjct: 620 KAISAKKEAA------NASHPILKESQLKLGESVKIVSMGLR-GTISSKPDKDGNLYVQC 672
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG----PRVQ 675
G MR K NIR + + Q ED ++ S G R
Sbjct: 673 GIMRT---KANIRDL--------------VLVQDEDGKAAMKKFYGRNTSSGKMDLSRAA 715
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ + ++L G ++A LD L A + + V+HG G G++++ V L++ P V
Sbjct: 716 SIRTEINLIGKNSDDAISALDKYLDDAYMSHLNNVRVVHGKGAGILRQAVHNYLKSVPYV 775
Query: 734 AKYE 737
++
Sbjct: 776 KSFK 779
>gi|160878313|ref|YP_001557281.1| MutS2 family protein [Clostridium phytofermentans ISDg]
gi|229486372|sp|A9KR74.1|MUTS2_CLOPH RecName: Full=MutS2 protein
gi|160426979|gb|ABX40542.1| MutS2 family protein [Clostridium phytofermentans ISDg]
Length = 796
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 230/706 (32%), Positives = 337/706 (47%), Gaps = 90/706 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ +R + K + + L + G + +IT R R C+ IK +
Sbjct: 150 IADDASPGLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEY 209
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K G+ + SS+G+T F+EP V+ NN L+ E E IL+ L+ +A +
Sbjct: 210 KNTF-QGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKY 268
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+KY + E+D FARAG ++ M +SQ H + INI+ +HPL+
Sbjct: 269 NLKYNQTTLAELDFIFARAGLSKNMK------ASQPHFNNRHYINIKKGRHPLI------ 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K VPIDI + ++VITGPNTGGKT
Sbjct: 317 ---------DPKKV--------------------VPIDIYFGDKFDLLVITGPNTGGKTV 347
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ V IL
Sbjct: 348 SLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSIL 407
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E + SLVL DE+G+GTDP+EG ALA +IL YL R + TTHY++L
Sbjct: 408 EHANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTDGV 467
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA EFS+ETL+PTYR+L G G SNA I+ +G II++A++ + +
Sbjct: 468 SNACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFI-----GTKDES 522
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKE 517
++ +L R +E A E+ +L R++ D+AKD R A+ KA+
Sbjct: 523 FEDVISNLEASRIAMEKDKAEAEQYKKEVEELKRKLAEKNSKIDDAKDRILREANEKAR- 581
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+ QE AK D ++ + N+ A+ KE E+ AA+ E D V
Sbjct: 582 --TILQE---AKDYADETIRKY-NKWGAGGANN-----KEMENERAALREKLGDTDSSLV 630
Query: 578 SET--NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
S+ N P + G+ VHV SL K +V +P + VQ G +R V +++
Sbjct: 631 SKAKKNRKQHKPSDFKVGDSVHVISLNLK-GSVSTLPNAKGDLYVQMGILRSLVNISDLE 689
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
I + + K QSG S + S P L++ G RV+EA
Sbjct: 690 LI---------DEETIVAKALTKTQSGKIRMS-KSMSISPE-------LNIIGKRVDEAL 732
Query: 693 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + +IHG GTG +KE V L+ V Y
Sbjct: 733 PLVDKYLDDAYLAHLPQVTIIHGRGTGALKEAVHAHLKRTNYVKGY 778
>gi|295706821|ref|YP_003599896.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
gi|294804480|gb|ADF41546.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
Length = 787
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 236/753 (31%), Positives = 366/753 (48%), Gaps = 121/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+E+ I ID +LD AS+ L IR + + R E L+SL++ +AQ +
Sbjct: 130 LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKMLSD 188
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ GI + SSSGAT F+EP+ V NN L
Sbjct: 189 AI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 240
Query: 142 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+++ E+ I L++ AE+A R+ YL+ E+D FA+ ++ + P +
Sbjct: 241 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 297
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ + ++ + KHPL+ + DV
Sbjct: 298 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 318
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
V DI++ + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F +
Sbjct: 319 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 376
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ IVDIL+ V ESLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 436
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
+ +R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+
Sbjct: 437 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 496
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
K +G ++I+RA+ + + ++ + SL + RR+ E + A L E L
Sbjct: 497 KRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKL 551
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
++E++ + + + + L K ++ Q + A + + ++ D LR S ++L+
Sbjct: 552 HKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKMSQKN-HALV 606
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTP----------QFGEQVHVKSLGDKLATV 605
KE E ++EA + +D +V S P Q G++V V S G K T+
Sbjct: 607 KEHE-----LIEARKRLED-AVPTLEKSKKKPAVPKKQERTLQAGDEVKVLSWGQK-GTL 659
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
VE +++ VQ G M+++VK+ ++ I +S + P ++ G N
Sbjct: 660 VERVSNNEW-QVQMGIMKMKVKEKDLEYI-SSPKPVETKPLATVK--------GKDYHVN 709
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 721
E LDLRG R E A +D AL R + +IHG GTG +++
Sbjct: 710 LE-------------LDLRGERYENALIRVEKYIDDALLANYPR--VSIIHGKGTGALRK 754
Query: 722 RVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V E L+NH V ++ + S G TV K
Sbjct: 755 GVQEYLKNHRSVKNIRFGEASEGGSGVTVVEFK 787
>gi|291527503|emb|CBK93089.1| MutS2 family protein [Eubacterium rectale M104/1]
Length = 792
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 216/721 (29%), Positives = 348/721 (48%), Gaps = 85/721 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + + + L K+ + ++T R R C+ +KA
Sbjct: 145 IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTRTYLQDAVVTMRDGRYCLPVKAEA 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ + SS+G+T F+EP V NN L E E IL+ L+ ++A +
Sbjct: 205 KGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAALSDKVAMNAA 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + + E+D FA+A A+ +GV P ++ H INI +HPLL +
Sbjct: 264 ALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH------INIRKGRHPLLDAKKV- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPID+++ E + ++ITGPNTGGKT
Sbjct: 317 ----------------------------------VPIDVRLGEEYKQLIITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 SLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E SL L DE+ SGTDP+EG ALA SIL L + + TTHY++L
Sbjct: 403 EKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQYGAITMATTHYSELKVYALSTDGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF++ETL PTYR+L G G SNA I+ +G D II+ A+ R
Sbjct: 463 ENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGLDENIIEDAKS-----RINDNDLD 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+L SL +R+ +E + S AEI L +++E++ + +D+ + + ++ +
Sbjct: 518 FEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLEEKNERIDKSKDKILREANEEAYK 577
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
L AK D +++F N+ A ++ + KE + + + + D + +
Sbjct: 578 ILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSALRDKMNDKEKKLSDIKKNTAKAN 635
Query: 584 SFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
P+ G+ V V SL K TV +P + VQ G +R V N++ + +
Sbjct: 636 HKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYVQMGILRSLVNINDLVLLNDD--- 691
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK-----NSLDLRGMRVEEASHQL 695
+PA ++ G +GS +++ SK + ++L G +EA L
Sbjct: 692 --VSPA---------KKYGGSGS---------KIKMSKSLSVSSEINLIGKTTDEALALL 731
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
D L A + + ++HG GTG +++ V +L+ +A+Y + + G T+A
Sbjct: 732 DKYLDDAYIAHLTSVRIVHGKGTGALRKAVHGLLKRTKTIAEYHLGEFGEGDAGVTIATF 791
Query: 752 K 752
K
Sbjct: 792 K 792
>gi|325288446|ref|YP_004264627.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
gi|324963847|gb|ADY54626.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
Length = 793
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 216/719 (30%), Positives = 349/719 (48%), Gaps = 91/719 (12%)
Query: 29 LEEKIGFCI--DCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGG 82
LE++I CI D K I D+ASEDL IR +R + LD +++ A Q
Sbjct: 137 LEDEISRCINEDGK---IDDKASEDLAKIRRMITGIHQRLKDVLDGIMRNPATQKM---- 189
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +IT R R V +K + +GI + S+SGAT F+EP V+ N
Sbjct: 190 LQDRVITTRGDRYVVPVKQEYGSAF-NGIVHDQSASGATLFIEPAAVVQLGNELREAVLR 248
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL LTA +A EI + + +D A+A + M+ P++ ++ +
Sbjct: 249 ENREVQRILQQLTAIVAVKVDEIAASFEALARLDFVLAKALLSDKMNAGSPLVLNKPQIK 308
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ + +HPLL G VP+ I
Sbjct: 309 LNKA------RHPLLSGKV------------------------------------VPLSI 326
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ + ++VITGPNTGGKT ++KT+GL S+M ++GL++PA++ +L F I DIGD
Sbjct: 327 ELGEDFNILVITGPNTGGKTVTLKTVGLMSVMMQSGLHIPAESDSKLGVFRKIFIDIGDE 386
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFSGH+ IV I++ +SLVL DEIG+GTDP+EG ALA +I+ L DR
Sbjct: 387 QSVEQSLSTFSGHLKNIVGIVKEADDKSLVLFDEIGAGTDPAEGAALAMAIISELLDRGC 446
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY L ENA+ EF ETL PTYR++ G G SNA +IA+ +G +
Sbjct: 447 RGIATTHYGTLKTFAYNTAGLENASVEFDPETLSPTYRLMIGIPGRSNAFSIAERLGLQK 506
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE---I 499
I+ A+ + ERQ + S+L ++L E +R++E + E+ + RE I
Sbjct: 507 NILDLAKTYI----SERQM-KVSDLLENLEETQREIEL---GKLKIQEELQKVTRENAQI 558
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
++A+ +D + + K ++ + + +K + + V+ + + ++ + + I+++
Sbjct: 559 AEKARLMDEKYEEIVQKAKEEAMEIVRGSKHEAEKVILEIKEAQKEEQKKQ-QAAIEKAR 617
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ + E + S P G+ V++ +L K V+ P + V+VQ
Sbjct: 618 QGLKKLSEGLYSGKERSGGNLRPEQVKP--GQLVYLPNLRQK-GQVITKPDHNGEVVVQA 674
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V + IR I +++ R GS G S + T ++
Sbjct: 675 GILKISVSISEIRIIDETRKAEHFEKTIR----------GSMGLS--------KAVTLRS 716
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+DLRG V+EA LD L A + + +IHG GTG ++ V + L+ HP V +
Sbjct: 717 EVDLRGRMVDEAEGILDKYLDDAVLTGINQVSIIHGKGTGSLRNGVHQFLKRHPHVVSF 775
>gi|414153028|ref|ZP_11409355.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455410|emb|CCO07257.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 783
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 223/737 (30%), Positives = 361/737 (48%), Gaps = 92/737 (12%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA----ERKRNMENL 66
HRY L E+ + +LE+ I I I D AS L IR + R E +
Sbjct: 110 HRYPLLSEIAASLTQQPQLEKDILRAI-LPGGEIADHASPQLLQIRRGILRAQNRIRERV 168
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
+S+++ Q + + +P++T R+ R + +K ++ +P GI + S+SGAT F+EP
Sbjct: 169 ESIIRAPENQKY----LQEPIVTVRQDRYVIPVKQEYRNQIP-GIVHDQSASGATLFVEP 223
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
V+ NN RL +E E IL+ L+ ++ +E+ + + E+D ARA ++
Sbjct: 224 LAVVDANNEVRRLMAAEKQEIQRILAELSQGVSAVAQELSLALQALAELDYIMARARYSL 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ P ++ S I I+ +HPLL G +
Sbjct: 284 KLKAWSPQITEGS-----PYIYIKQGRHPLLPGDA------------------------- 313
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP I++ + +VITGPNTGGKT ++KT+GL +LM++AGL++PA+
Sbjct: 314 -----------VPATIELGKNFKTLVITGPNTGGKTVTLKTVGLFALMTQAGLHIPAEAG 362
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+ + I ADIGD QS+EQ+LSTFS H++ IV IL+ V +SLVL+DE+G+GTDP+EG
Sbjct: 363 TTMGVYKKIFADIGDEQSIEQSLSTFSSHMTNIVHILQQVDEDSLVLLDELGAGTDPTEG 422
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA +IL+ L +R + TTHY++L ENA+ EF ETLRPTYR+L G
Sbjct: 423 AALARAILEELHNRGACTIATTHYSELKNYAYTTPGVENASVEFDAETLRPTYRLLIGRP 482
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA I+ +G I+ RA++ + +Q + +EL L + ++ E AA
Sbjct: 483 GRSNAFEISARLGLRPDIVNRARQFL-----TTEQVQVAELINKLEKTQQAAEKDRAAAA 537
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+L E L E A++L + + A+ ++ + A+++ + V++ +L +
Sbjct: 538 ALRRESEQLQEEYRRLAEELRTKKEEILARAHEEAGSFVRRARLEAEEAVKELRARLAEE 597
Query: 547 SADEINSLIKESESAIAAIVE-----AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
+ I+++ S + + A +P V + P GE+V + K
Sbjct: 598 NTKNREEAIQQARSKLQQVTNKVTTGAPQPAAAGEVPD----QVKP--GEEVFLPKYNQK 651
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
A V+ V G++ V VQ G +++ V P+ +R N PR+ +
Sbjct: 652 -AYVLSVSGEN--VQVQAGILKMVV------PVQELRRVN----TPRV----------TT 688
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
G S + T SLDLRGM +EA +++ L A + + +IHG GTG +
Sbjct: 689 GESKVGKVLTDKALTVSTSLDLRGMTGDEAWPEIEKYLDDAFLAGLNSVILIHGKGTGAL 748
Query: 720 KERVLEILRNHPRVAKY 736
+ V L++HPRV +
Sbjct: 749 RAAVHRELKSHPRVKSF 765
>gi|291544279|emb|CBL17388.1| MutS2 family protein [Ruminococcus champanellensis 18P13]
Length = 793
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 209/687 (30%), Positives = 338/687 (49%), Gaps = 73/687 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR + ++ + L L K+ + + ++T R R + +KA H
Sbjct: 142 IADGASTALASIRRKIAQSGQKLRDTLDKMIRSASMQKYLQESIVTLRDGRYVLPVKAEH 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSE 162
+ + G+ + S++G TYF+EP VE NN ++RL S+ EE I++ L AE
Sbjct: 202 RGDV-QGLIHDTSATGQTYFIEPIAIVEANN-DIRLLESQEQEEIERIITNLCAECGAYA 259
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
+ E++L FA+A A M P L+ D ++ ++ +HPLL
Sbjct: 260 DVLIENYHVCAELNLYFAKANLAAKMKATLPQLTD------DGAVVLKKARHPLL----- 308
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
+P K VPID+ + E + ++ITGPNTGGKT
Sbjct: 309 ----------DPAKV--------------------VPIDVTLGREYQALIITGPNTGGKT 338
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
++KT+GL M+ GL +PA + + F IL DIGD QS+EQNLSTFS H + +++I
Sbjct: 339 VALKTVGLLCAMAMCGLLIPAGDGSSVSVFSHILVDIGDAQSIEQNLSTFSAHTNHVIEI 398
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
L+ +SLVL+DE+GSGTDP EG ALA S+++ L+ + + TTHY +L +
Sbjct: 399 LKTADAQSLVLLDELGSGTDPVEGAALAVSVIEQLKRQGAKLMTTTHYQELKLYAIETPD 458
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 462
ENA+ EF LETL+PTYR+L GS G SNA I++ +G +II A+ LV +Q
Sbjct: 459 VENASCEFDLETLQPTYRLLIGSPGKSNAFAISEHLGMPPQIIAYAKTLV-----STEQT 513
Query: 463 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 522
R + + L R +L++Q + E + + ++ K L++ + Q
Sbjct: 514 RFESVIEKLEAARAELDTQNQQLRQARLEAQAHEQALREQLKQLEQEKDAALEQARQSAM 573
Query: 523 QELNFAKVQIDTVVQDFEN----QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
Q + K++ + ++ + E + R+ +D ++ L ++++ A + +A P +
Sbjct: 574 QIIENTKIESNRLIDELEQLRHEKDRETFSDRVSQLKSRTKNSFARMHDAANPVQQ-RMQ 632
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 638
E + G+ V+V + DK TV+ P + V VQ G M+ +VK N+R
Sbjct: 633 EQYKLPRPLKKGDTVYVTDI-DKQGTVLAEPDSSNMVFVQIGIMKTKVKLENLR------ 685
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 698
+ AA +K+Q ++S S+ + A LD+RG +E +Q++
Sbjct: 686 LQQAAKVMLNGKKRQPAKKSVSSKVTRSAAM----------ELDIRGCAADEGVYQMEAF 735
Query: 699 L--ACWESRSVLFVIHGMGTGVVKERV 723
L A S + +IHG GTGV++ V
Sbjct: 736 LDSALVSGISTVTIIHGKGTGVLRAAV 762
>gi|402833826|ref|ZP_10882436.1| MutS2 family protein [Selenomonas sp. CM52]
gi|402279672|gb|EJU28454.1| MutS2 family protein [Selenomonas sp. CM52]
Length = 791
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 224/742 (30%), Positives = 360/742 (48%), Gaps = 101/742 (13%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLDSL 69
PL+ E K L +LE ++ +D + +LD AS +L IR E + E ++++
Sbjct: 113 PLIKEQAKGIEILGQLERRLENSVD-EHGNLLDDASVELSRIRRELRSGRRRAKEQMEAI 171
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L + Q F +IT+R R + IK ++ P GI + S+SGAT F+EP
Sbjct: 172 LHRTEYQKF----FQDAIITQRAERNVIPIKQEYRQSFP-GIVHDQSASGATLFIEPMAL 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN +L+ +E E IL LL+ E+ K+ ++ + +D FARA A M
Sbjct: 227 VDLNNDLKQLALAEKTEVQRILRLLSQEVGKNGSVLEGNCAILASLDFIFARAKLAADMQ 286
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ + ++ +HPL+ + +
Sbjct: 287 ATRPAINREGRTKLVAA------RHPLIDAAKV--------------------------- 313
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPIDI + R+++ITGPNTGGKT S+KT+GL +LM ++G Y+PA +
Sbjct: 314 --------VPIDIALGESYRMLLITGPNTGGKTVSLKTIGLFALMVQSGCYIPAAAGSEI 365
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+ + IGD QS+EQ+LSTFS H+S +V +LE V L+L+DEIG+GTDP EG AL
Sbjct: 366 SVYTNVYTVIGDEQSIEQSLSTFSAHMSHLVKLLECVEGTDLLLLDEIGAGTDPEEGAAL 425
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL+ R +VTTHY++L ENA EF +ETLRPTYR+L G G S
Sbjct: 426 AMAILEQFLARGASTIVTTHYSELKTFAFTREGIENACVEFDVETLRPTYRLLTGMPGAS 485
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK---LESQARTAA 486
NA I++ +G I RAQ+ ++ + ++ + LM E+R LE Q R A
Sbjct: 486 NAFAISRRLGLSEAAILRAQQFIKADHAQFEKVVNQLESEKLMYEQRNADILERQQRV-A 544
Query: 487 SLHAEIMDLYREIEDEAKDLDRRA----AHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
L + L EI ++ + + ++A A+L + ++ ++ + KVQ D D +
Sbjct: 545 KLEEKTQALKDEIREKKEQMLKKARQESANLVRRTRREAEEIIKSLKVQFD----DLGIE 600
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLG 599
R + E ++E+ A R + Q G+ V+V+ L
Sbjct: 601 SRRRAMQEAREKLQEA---------AERSRTGLLPGKAYKEKIDMQKLAVGDVVYVRKL- 650
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
D+ ATV+++ G + + VQ G ++ VK + R + ++++ PA R G
Sbjct: 651 DQKATVLKIQGAN--IEVQLGNLKTYVKAGDCRFVERARKE---QPAAR----------G 695
Query: 660 SAGSSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
S G+ G +Q + N +D+RG+ V+EA L L A + +IHG
Sbjct: 696 SGGTKG----AGALLQKTANLHREIDVRGLMVDEAEQVLGKFLDDAVVGGLGQVLIIHGK 751
Query: 715 GTGVVKERVLEILRNHPRVAKY 736
GTG +++ + + L++H VA++
Sbjct: 752 GTGALRKGIHDYLKHHKSVARF 773
>gi|312135400|ref|YP_004002738.1| muts2 family protein [Caldicellulosiruptor owensensis OL]
gi|311775451|gb|ADQ04938.1| MutS2 family protein [Caldicellulosiruptor owensensis OL]
Length = 786
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 213/704 (30%), Positives = 362/704 (51%), Gaps = 88/704 (12%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E L+ +++ Q F + +P+IT R ++ +
Sbjct: 141 ILDTASPRLKEIR-DRIRRLETRIRDELNRMIRDPKIQRF----LQEPIITVRGDKLLLP 195
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI-LSLLTAE 157
+KA HK + GI + S++GAT F+EP VE +N ++R++ SE EE L L+
Sbjct: 196 VKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN-QIRVARSEEKEEIEKILQELSQL 253
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
I+ S EIK + + E+D+ F +A +A PIL++ + IN++ +HPL
Sbjct: 254 ISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGY------INLKKARHPL- 306
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+E ++ VPID+ + E V+VITGPN
Sbjct: 307 ---------------------IEKEKV-------------VPIDVHLGKEFDVLVITGPN 332
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L++++G++LPA + F I ADIGD QS+ Q+LSTFS H+
Sbjct: 333 TGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFSKIFADIGDEQSIIQSLSTFSAHMK 392
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + +LVL+DEIGSGTDP EG ALA +IL++L ++ V TTHY +L
Sbjct: 393 NIIEITQNADNSTLVLLDEIGSGTDPEEGAALAKAILKFLHNKGAKVVATTHYGELKTFA 452
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
++ RFENA+ EF + TL+PTYR+L G G SNAL I+ ++G +++I++ A+ + +
Sbjct: 453 QQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLNKEIVELAKSYMSKKML 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E +++ + +R++LE +A L E +L + +E+E + + +K +
Sbjct: 513 EL-----TDIINEMERKRKELEEVLESANKLKIETENLKKTLEEERRRFEAEKQRIKERA 567
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+++ ++ F + D V + F+ + A + + ++K+ E + + S
Sbjct: 568 SKEARE---FVQRVEDEVEKLFKELRKIAESLKEKEMLKQLEEKKREYENLVKSIEQASQ 624
Query: 578 SETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
E S P+ G++V+VKS D V +P + V+ G M++ V ++I I
Sbjct: 625 KEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPDSKGNLTVRIGIMKLSVNISDIFEI 683
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+E+ + + SS + + ++ S+D+RG ++A +
Sbjct: 684 ------------------EEETTTKNLVSSKKAVEI--KQKSIDMSIDVRGKTSDDAILE 723
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 724 VDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSF 767
>gi|339442882|ref|YP_004708887.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
gi|338902283|dbj|BAK47785.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
Length = 792
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 233/741 (31%), Positives = 367/741 (49%), Gaps = 104/741 (14%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV-- 73
L EL + L E+I CI + I D AS L IR E + S L ++
Sbjct: 118 LQELFDRLEPVPGLAEEIDRCILAEDEIS-DDASPKLRQIRRTINGMSERIHSALNRIVN 176
Query: 74 --AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
A +I+ + P++T R R C+ +KA +K +P G+ + SSSG T F+EP V+
Sbjct: 177 SSAGRIY----LQDPIVTMRSGRYCLPVKAEYKAQIP-GMVHDQSSSGNTLFIEPVSVVK 231
Query: 132 FNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIK--YLMDRVLEIDLAFARAGFAQWM 188
NN E+R + + AEE IL+ L+++ A+ +I+ ++ R+L D FA+ +AQ +
Sbjct: 232 LNN-ELRETYLKEAEEIDVILARLSSDTAEYSAQIQEDFITCRLL--DFIFAKGRYAQAI 288
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
+G+ P+ +++ I I +HPLL +P K
Sbjct: 289 NGMAPVFNTEG------IIRIRRGRHPLL---------------DPKKV----------- 316
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPID+ + + V+V+TGPNTGGKT S+KT+GL +LM +AG+++PA + +
Sbjct: 317 ---------VPIDVSLGEDYHVLVVTGPNTGGKTVSLKTVGLLTLMGQAGMHIPAADRSQ 367
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
L FD + ADIGD QS+EQ+LSTFS HI+ +V I ++ SLVL DE+ +GTDP+EG A
Sbjct: 368 LAVFDEVFADIGDEQSIEQSLSTFSSHITNMVSIFRQMNPNSLVLFDELCAGTDPNEGAA 427
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA SIL LR R + TTHY+++ ENA+ EF +ETL PTYR++ G G
Sbjct: 428 LAISILDDLRSRGIRTMATTHYSEMKIYALSTEGVENASCEFDVETLSPTYRLVTGVPGK 487
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I++ +G +I A+ +RL E + ++ L + R +E + + A
Sbjct: 488 SNAFAISQRLGLPESLIDGAR---QRLSQEAESF--EDVIADLEQSRHTIEQEQQQIARY 542
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----ENQLR 544
EI + E+ + L+ R L A+ ++ Q L AK D ++ F +N L
Sbjct: 543 KTEIETMKEELAESRNKLEARRDKLIAEANEEAAQILREAKEVADDTIRKFRKYGKNGL- 601
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKL 602
DA+A E K+ E + +A+R + + G+ V V S+ K
Sbjct: 602 DAAAME-----KDREKVRKQLDKANRNAVQKKKQKIENHQVPKKLMIGDSVKVLSMNLK- 655
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
TV +P + ++VQ G +R +V NIR + L + ++ S G
Sbjct: 656 GTVHTLPNEKGDLMVQMGILRYKV---NIRDLV-------------LINEDAPSKAQSRG 699
Query: 663 SSNEEASYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 715
++ R++ SK+S ++L G +V+EA LD L A + + V+HG G
Sbjct: 700 TTM------GRMKMSKSSQVRPEINLIGKKVDEALSLLDKYLDDAYLANMHNVRVVHGKG 753
Query: 716 TGVVKERVLEILRNHPRVAKY 736
TG +++ V + L+ V Y
Sbjct: 754 TGALRKAVHQYLKTQKHVKSY 774
>gi|295107995|emb|CBL21948.1| MutS2 family protein [Ruminococcus obeum A2-162]
Length = 793
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 223/731 (30%), Positives = 340/731 (46%), Gaps = 104/731 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---G 82
LT L +I CI + D S+D + +RNM+ + + + G
Sbjct: 128 LTPLSAEIRRCILSE-----DEFSDDASPALRQIRRNMKITNDRIHTQLTSLVNGGVRTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN L
Sbjct: 183 LQDSVITMRNGRYCIPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQ 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ +IA + I + ++++D FARA A M+ PI + +
Sbjct: 242 EQKEIEVILADLSQQIALEQETISLNLKIMVQLDFIFARAALAMDMNASEPIFNDEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
IN++ +HPL+ N + VPIDI
Sbjct: 300 ----INLKKARHPLI-------------NKKKV----------------------VPIDI 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
++ ++VITGPNTGGKT S+KT+GL +LM ++GL++P + L F + ADIGD
Sbjct: 321 RLGDTFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFHEVYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L+ R SLVL DE+ SGTDP+EG ALA SIL YL +R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLDKADRHSLVLFDELCSGTDPTEGAALAISILSYLHERGI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L + ENA EF +ETL PTYR+L G G SNA I+ +G +
Sbjct: 441 RTMATTHYSELKVFALSASGVENACCEFDVETLSPTYRLLIGIPGKSNAFAISSKLGIPQ 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II++A+ E+L Q ++ SL E R +E++ A EI L +++E +
Sbjct: 501 SIIEKAK---EQLN--EQDESFEDVLTSLEESRVTIENERTEIAQYKQEIETLKKQLESK 555
Query: 503 AKDLD---RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSL 554
+ LD R +E +V QE Q + F N D +A E +
Sbjct: 556 QEKLDIQKDRIIRQANEEAHKVLQEAKDYADQTMKLFHKFHNDYVDTAAVERERQKLRQK 615
Query: 555 IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 614
+ ++E ++ +P + + + G+ V V S+ K T+ P
Sbjct: 616 LNKTEQKMSQPAAKKKPKKELTAKDVRP-------GDTVRVLSMNLK-GTISTRPDSKGY 667
Query: 615 VLVQYGKMRVRVKKNNIRPI-------PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
+ VQ G +R +V +++ I P+ R A R S SA S E
Sbjct: 668 LFVQMGIIRSKVHISDLELIDEPVITTPSLSRTGAGKI----------RMSKSASVSTE- 716
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLE 725
++L G V+EA +LD L A + ++HG GTG +++ V
Sbjct: 717 -------------INLLGKTVDEAIAELDKYLDDAYIAHLKTVRIVHGKGTGALRKGVHN 763
Query: 726 ILRNHPRVAKY 736
L+ VA Y
Sbjct: 764 YLKRQKHVASY 774
>gi|288553660|ref|YP_003425595.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pseudofirmus OF4]
gi|288544820|gb|ADC48703.1| MutS2 recombination and DNA strand exchange inhibitor protein
[Bacillus pseudofirmus OF4]
Length = 788
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 217/740 (29%), Positives = 368/740 (49%), Gaps = 110/740 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
LT++E + CID + LD AS L IR + + ++ S L+ + +
Sbjct: 129 LTDVERAVKQCIDDNGHV-LDSASPALRTIRQQVRSYESSVRSKLESITRSSNTQKMLSD 187
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
++T R R + +K ++ GI + S+SGAT F+EP+ V NN E
Sbjct: 188 AIVTIRNDRFVIPVKQEYRSAF-GGIVHDQSASGATLFIEPQAIVTINNQLREAKVKEAH 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+A I++ I ++++ ++D F++A +A+ + P+L+ + +
Sbjct: 247 EVERILAELSALISEHAEAILINLEQLAQLDFIFSKAHYAKRIKATAPLLNDRGY----- 301
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+++ +HPLL + VPID+ +
Sbjct: 302 -IHLKRARHPLLADEEV-----------------------------------VPIDVILG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E R ++ITGPNTGGKT ++KT+GL +LM+++GL++P + F I ADIGD QS+
Sbjct: 326 DEYRSLIITGPNTGGKTVTLKTVGLLTLMAQSGLHVPVDEESEVAVFKQIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IVDIL V +SLVL DE+G+GTDP+EG ALA SIL + R V
Sbjct: 386 EQSLSTFSSHMTNIVDILGKVDFQSLVLFDELGAGTDPTEGAALAISILDDVYKRGACVV 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L NA+ EF +ETLRPTYR+L G G SNA I++ +G D +II
Sbjct: 446 ATTHYSELKGYAYNREGAMNASVEFDVETLRPTYRLLIGVPGRSNAFAISRRLGLDERII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A+ E++ E Q ++++ LE+ ++A S AE ++ ++ E +
Sbjct: 506 ESAK---EQIDSETNQ------IENMIA---SLETSQKSAESEWAEASEIRKKAETLRNE 553
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAI 562
L + L+ ++ + +++ + AK +++ ++ E +LR+ + +N +KE +
Sbjct: 554 LMAQIEQLEEQKERVLKEAEDKAKAAVESAKEEAEFIIGELREMQKEGLN--VKEHQ--- 608
Query: 563 AAIVEAHRPDDDFSVSETNTSSF------------TPQFGEQVHVKSLGDKLATVVEVPG 610
+++A + ++ + T T + G+ V V S G K + +V
Sbjct: 609 --LIDAKKHLEEAAPKLTAKQKKVKKEAARAKAKQTIKAGDDVKVLSFGQKGHVIEQV-- 664
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
++ VQ G M+++VK ++++ + K+ P +R GS +
Sbjct: 665 NEKEYNVQIGIMKMKVKADDLQLLDKPKQVE-TKPLATVR-----------GSEHH---- 708
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLE 725
K LDLRG R E+A ++ D LA + S +IHG GTG +++ V +
Sbjct: 709 ------VKPELDLRGERYEDAMLKVEKYIDDALLAGYHQVS---IIHGKGTGALRKGVKQ 759
Query: 726 ILRNHPRVAKYEQESPMNYG 745
++ HPR+ K ++ MN G
Sbjct: 760 LVSKHPRI-KAARDGGMNEG 778
>gi|433443934|ref|ZP_20409057.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
gi|432001908|gb|ELK22775.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
Length = 781
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 229/742 (30%), Positives = 367/742 (49%), Gaps = 101/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L ELE++I CID + +LD AS+ L +R + + R + L+S+++ +AQ
Sbjct: 126 LPELEQRIYHCID-ESGDVLDGASDRLRSLRQQLRTIEGRVRDKLESIIRSSSAQ----K 180
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K +++ GI + SSSGAT F+EP+ VE NN +L
Sbjct: 181 TLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELNNELQQLRV 239
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E ILS L+A + + I ++ + ++D FA+A +A+ + P ++ + ++
Sbjct: 240 KEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKPAINERGYI 299
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ P SD VP D
Sbjct: 300 RLIQA------RHPLI----------------P-------------------SDEVVPND 318
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F + ADIGD
Sbjct: 319 IELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFRAVYADIGD 378
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +IL + +R
Sbjct: 379 EQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAILDEVHNRG 438
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF +ETL PTY++L G G SNAL+I++ +G D
Sbjct: 439 ARVVATTHYPELKAYGYNRRGVMNASVEFDIETLSPTYKLLIGIPGRSNALDISRRLGLD 498
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II RA+ + + + + SL + +++ E + A L E L E+E
Sbjct: 499 EHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEKAERLRHEAEQLRNELER 553
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLI---KE 557
+ +L+ + L K +Q ++ + A D V+Q + Q + A+A + + LI K+
Sbjct: 554 QWNELNEQRDRLLEKAKEQAEEIVKKAMKTADEVIQHLRDMQKQQAAAIKEHELIEARKK 613
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
E AI I + ++ P G++V V L K + +V D LV
Sbjct: 614 LEEAIPQINTKKKKR-----AQQTKQPLHP--GDEVKVVHLNQKGQLIEKV--SDKEWLV 664
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++V + N++ + ++PAP + A+ R
Sbjct: 665 QIGILKMKVHEENLQYV--------SSPAPI--------------ETKPIATVKGRDYHV 702
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E+A ++ D LA + S +IHG GTG +++ V + L+NH
Sbjct: 703 PLELDLRGERYEDALLRVEKYIDDAVLAGYPRVS---IIHGKGTGALRKGVQQYLQNHRS 759
Query: 733 VA--KYEQESPMNYGCTVAYIK 752
V ++ + + G T+ +K
Sbjct: 760 VKSIRFGEATEGGTGVTIVELK 781
>gi|255975938|ref|ZP_05426524.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|307278476|ref|ZP_07559550.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
gi|255968810|gb|EET99432.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|306504819|gb|EFM74015.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
Length = 788
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 231/753 (30%), Positives = 364/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ AP Q+E + +
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPV-----------AP----QKEAKPRVT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S E + G + LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 700 TVRSAESSHVGTQ-------LDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L++H V YE +P N G A +
Sbjct: 753 LRTGITEFLKHHRSVKSYEF-APQNQGGNGATV 784
>gi|331701294|ref|YP_004398253.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
gi|329128637|gb|AEB73190.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
Length = 788
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 221/726 (30%), Positives = 335/726 (46%), Gaps = 101/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
ILD AS L IR N+ S + K + A + +P+IT R R + IKA +
Sbjct: 147 ILDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEPIITVRDGRFVLPIKAEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + S+SG T ++EP VE NN R +E AE IL+ LT I
Sbjct: 206 KQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAEVRRILAELTNLIRPHRD 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ MD V ++D A+A FA V P VS + IN+ +HPL+
Sbjct: 265 ELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNVINLRKARHPLI------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
P V N DI++ + +++TGPNTGGKT
Sbjct: 313 ----------PRDQVVAN-------------------DIELGDQYNTIIVTGPNTGGKTI 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ IL
Sbjct: 344 TIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIEANLSTFSSHMDNIISIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ S++SLVL+DE+G+GTDP EG ALA +I+ G + TTHY +L
Sbjct: 404 KQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIATTHYPELKAFAYNRQGI 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF +ETL+PTYR L G G SNALNIA +G II +A+ + +
Sbjct: 464 INASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPAAIIDQARAFT-----DSENQD 518
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+ + + L + ++ +A E L +++D+ + + L + QQ Q
Sbjct: 519 INNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKYESQKERLVEQAKQQANQ 578
Query: 524 ELNFAKVQIDTVVQDF-------------ENQLRDASADEINSLIKESESAIAAIVEAHR 570
+ AK + D ++ D EN+L DA +N L ++ +
Sbjct: 579 VVEEAKKKADRIIDDLHQKQAQVGKVAVKENELIDAKG-ALNQLESAPSLTKNKVLRKEK 637
Query: 571 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
DF G+ V VKS G + T++ + T VQ G +++++++++
Sbjct: 638 AKHDF------------HPGDDVLVKSYGQQ-GTLLR-KDKNHTWDVQIGILKMQIEESD 683
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
+ A PA +Q+ Q + S P +LDLRG R EE
Sbjct: 684 LE---------KATPA-----KQDKNQYQTHVSRTRSTGMSP-------TLDLRGHRYEE 722
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGC 746
A+ ++D I A + +IHG GTG +++ V E L+ +PRV + +P G
Sbjct: 723 ATTEVDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLKRNPRVKSFGYSAPNAGGDGS 782
Query: 747 TVAYIK 752
TV +K
Sbjct: 783 TVVKLK 788
>gi|238925261|ref|YP_002938778.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
gi|259511157|sp|C4ZI07.1|MUTS2_EUBR3 RecName: Full=MutS2 protein
gi|238876937|gb|ACR76644.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
Length = 792
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 216/721 (29%), Positives = 348/721 (48%), Gaps = 85/721 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + + + L K+ + ++T R R C+ +KA
Sbjct: 145 IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTRTYLQDAVVTMRDGRYCLPVKAEA 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ + SS+G+T F+EP V NN L E E IL+ L+ ++A +
Sbjct: 205 KGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELFIKEQEEIEKILAALSDKVAMNAA 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + + E+D FA+A A+ +GV P ++ H INI +HPLL +
Sbjct: 264 ALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH------INIRKGRHPLLDAKKV- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPID+++ + + ++ITGPNTGGKT
Sbjct: 317 ----------------------------------VPIDVRLGEDYKQLIITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 SLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E SL L DE+ SGTDP+EG ALA SIL L + + TTHY++L
Sbjct: 403 EKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQYGAITMATTHYSELKVYALSTDGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF++ETL PTYR+L G G SNA I+ +G D II+ A+ R
Sbjct: 463 ENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGLDENIIEDAKS-----RINDNDLD 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+L SL +R+ +E + S AEI L +++E++ + +D+ + + ++ +
Sbjct: 518 FEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLEEKNERIDKSKDKILREANEEAYK 577
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
L AK D +++F N+ A ++ + KE + + + + D + +
Sbjct: 578 ILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSALRDKMNDKEKKLSDIKKNTAKAN 635
Query: 584 SFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
P+ G+ V V SL K TV +P + VQ G +R V N++ + +
Sbjct: 636 HKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYVQMGILRSLVNINDLVLLNDD--- 691
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK-----NSLDLRGMRVEEASHQL 695
+PA ++ G +GS +++ SK + ++L G +EA L
Sbjct: 692 --VSPA---------KKYGGSGS---------KIKMSKSLSVSSEINLIGKTTDEALALL 731
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
D L A S + ++HG GTG +++ V +L+ +A+Y + + G T+A
Sbjct: 732 DKYLDDAYIAHLSSVRIVHGKGTGALRKAVHGLLKRTKTIAEYHLGEFGEGDAGVTIATF 791
Query: 752 K 752
K
Sbjct: 792 K 792
>gi|423683336|ref|ZP_17658175.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
gi|383440110|gb|EID47885.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
Length = 785
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 227/741 (30%), Positives = 368/741 (49%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L+ELE I CID + LD ASE L IR + + R + L+S+L+ +AQ
Sbjct: 129 LSELERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIITIRNDRFVIPVKQEYRSSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
+E E IL +LT + A+ E+ + + + +D FA+A +A+ V P +++ +V
Sbjct: 243 NEKQEIERILRVLTEKTAEHTNELFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL PL D VP D
Sbjct: 303 RLIQA------RHPLL----------------PL-------------------DEVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KTLGL ++M+++GL++PA+ FD + ADIGD
Sbjct: 322 IELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ++ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF ++TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVIATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I RA + + + + SL + +++ E++ + ++ AE L+R+++
Sbjct: 502 DYLIGRA-----KAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KES 558
+ + L + Q+ +++ A + D ++Q D A + + LI K
Sbjct: 557 QISEWQEIKDKLYEEAEQKAAEKVKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ + +A +P + +T+ P G++V V + G K T++E G + VQ
Sbjct: 617 EEAVPSFEKAKKP----AQKKTDKRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ + K+A P ++Q A A G S
Sbjct: 669 IGILKMKVKEKDLEFL-----KSAPEP---------EKQKTIA------AVKGKDYHVSL 708
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A H++ D LA + S +IHG GTG +++ V ++L++H V
Sbjct: 709 E-LDLRGERFENALHRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KNSRFGEAGEGGSGVTIVELK 785
>gi|28211873|ref|NP_782817.1| recombination and DNA strand exchange inhibitor protein
[Clostridium tetani E88]
gi|38604782|sp|Q891U1.1|MUTS2_CLOTE RecName: Full=MutS2 protein
gi|28204315|gb|AAO36754.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 786
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 225/725 (31%), Positives = 349/725 (48%), Gaps = 82/725 (11%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR-AERKRN---MENLDSLLKKV 73
++ + L LEE I F I I DRAS L IR + R +N + ++SL++K
Sbjct: 120 DICEGIELLKGLEESI-FNIVISDDEIADRASLKLYGIRRSLRDKNDSLRDRVNSLVRKY 178
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + ++ + T R R + ++A HK +P G+ + SSSGAT F+EP V N
Sbjct: 179 SPYLQES------IYTIRGDRYVLPVRAEHKGSVP-GLVHDQSSSGATLFIEPMSLVNLN 231
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N L E E IL L+ ++ + + + E+D FA+A FA + P
Sbjct: 232 NEIKELLLKEREEIERILEELSLKVYNNLDVVNVNAKVIWELDFIFAKAKFASHNNCTLP 291
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+S V IEG KHPL+ D E
Sbjct: 292 KVSEDGIVDI-----IEG-KHPLI--------------------DTEKV----------- 314
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP DI + + ++ITGPNTGGKT ++KTLGL +M +GL +PAK + + +F+
Sbjct: 315 ----VPTDIYLGKDFTSLIITGPNTGGKTVTLKTLGLIHIMGLSGLLIPAKENSTIAFFE 370
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H+ IVDI+ +SLVL DE+G+GTDP+EG ALA SI
Sbjct: 371 EIFADIGDEQSIEQSLSTFSSHMVNIVDIISKADHKSLVLFDELGAGTDPTEGAALAISI 430
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ LR R V TTHY++L K ENA+ EF +ETLRPTYR+L G G SNA
Sbjct: 431 LENLRRRKCKIVATTHYSELKGYALKTEDVENASVEFDVETLRPTYRLLIGIPGKSNAFE 490
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
I+K +G II+ A+ + E + L + L + K AR A E
Sbjct: 491 ISKRLGLGEDIIEEAKNNI-----ESDSLKFEALIEKLQSKSIKASDDARRAEMYKLEAD 545
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 553
L + ED+ K ++ L ++ ++ + AK + D ++++ + +
Sbjct: 546 RLKDKYEDKLKIVEETREKLLKGAQEEAKKLIKEAKEEADEILKNIRELEKMGYSSTARQ 605
Query: 554 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
++E + + + ++ E GE+V++ L D+ ++ P +
Sbjct: 606 KLEEERKKLNSKIHKLEEKEENLNKEKGKKIKEINLGEEVYLPKL-DQKVIILSKPDNRG 664
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
V VQ G M++ VK +++R + K +N K+ R++ R
Sbjct: 665 EVQVQAGIMKINVKLDDLRLVDKPKEEN---------KKGRKREAKL------------R 703
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
++T ++ +DLRGM EA + D L A + VIHG GTG++++ + ++L+ HP
Sbjct: 704 MRTVESEIDLRGMDSMEAVYNTDKYLDEAYVAGLKEVTVIHGKGTGILRKSINDMLKRHP 763
Query: 732 RVAKY 736
+V Y
Sbjct: 764 QVKNY 768
>gi|167772055|ref|ZP_02444108.1| hypothetical protein ANACOL_03429 [Anaerotruncus colihominis DSM
17241]
gi|167665853|gb|EDS09983.1| MutS2 family protein [Anaerotruncus colihominis DSM 17241]
Length = 793
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 225/714 (31%), Positives = 344/714 (48%), Gaps = 93/714 (13%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IR+ + E LD L++ Q + + + +IT+R R V ++ ++ + G+ +
Sbjct: 157 IRSAGAKAREVLDRLVRSATYQKY----LQENIITQRDGRFVVPVRQEYRNEI-KGLVHD 211
Query: 115 VSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 173
S SGAT F+EP G VE NN E+R L E AE IL L+A++ I + ++
Sbjct: 212 TSGSGATVFIEPMGVVEANN-EIRILQGQEQAEIDRILRELSAQVGACADSIGGSYEAIV 270
Query: 174 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 233
E+DL FA++ A M P +S + +HPLL
Sbjct: 271 ELDLYFAKSRLADEMRATEPAISETGAAELKRA------RHPLL---------------- 308
Query: 234 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 293
P +D VPID+++ + +V+TGPNTGGKT ++KTLGL S
Sbjct: 309 P-------------------ADRVVPIDLRLGGDFDTLVVTGPNTGGKTVAIKTLGLLSA 349
Query: 294 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 353
M++ GL LPA + +P F+ +L DIGD QS+EQ+LSTFS H++ I+ IL+ SLVL
Sbjct: 350 MAQCGLMLPAADGSTVPVFEKLLVDIGDEQSIEQSLSTFSAHMTNIIRILDEADGRSLVL 409
Query: 354 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 413
+DE+G+GTDP EG ALA +I++ LR + V TTHYA++ ENA+ EF +
Sbjct: 410 LDELGAGTDPVEGAALAVAIIERLRAQGAKVVATTHYAEIKMYALNTPGVENASCEFDVA 469
Query: 414 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 471
TLRPTYR+L G G SNA I + +G +I+ A+ V E LR E + + Q L
Sbjct: 470 TLRPTYRLLIGVPGRSNAFAICERLGLPAGVIEAARAHVSGENLRFEEVVSQLEQTRQEL 529
Query: 472 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 531
R + ESQ R A + D R ++ ++ + A ++A+ V+Q A +Q
Sbjct: 530 ERARVQAESQ-RAGAQRERDEADALRRAMEQEREREIERARVQARGI--VEQ----AGMQ 582
Query: 532 IDTVVQDFENQLRDASADEINSLIKESESAIAA-IVEAHRPDDDFSVSETNTSSFTPQ-- 588
++ + + R + +++SA A + H D V+ N +TP+
Sbjct: 583 AQKLLDELDELRRQKDSAGFAERAAQAKSAFKANMRRLHDLAD--PVTRKNIEQYTPERP 640
Query: 589 --FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 646
G+ V + SLG + TV+ P V VQ G ++ +V ++ +R + R
Sbjct: 641 LKRGDTVRLVSLG-REGTVLSAPDGQGFVQVQAGIIKTKVHQSELRLVDTKDRHVTV--- 696
Query: 647 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWES 704
G AG S S + K +DLRGM +EA +LD I + +
Sbjct: 697 ------------GGAGVSTRGVSSKAS-RDVKTEVDLRGMTTDEALMELDRFIDASVLSN 743
Query: 705 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKY------EQESPMNYGCTVAYIK 752
+ +IHG GTG ++ V + L+ H V + E ES G TVA +K
Sbjct: 744 VPTVTIIHGKGTGALRAAVQQRLKKHRSVKSFRLGTFGEGES----GVTVAELK 793
>gi|393199976|ref|YP_006461818.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
gi|327439307|dbj|BAK15672.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
Length = 788
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 222/747 (29%), Positives = 355/747 (47%), Gaps = 109/747 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L+ +I CID +LD AS L IR +E + + L+SL + A +
Sbjct: 131 LTALQHEINDCIDDNG-TVLDSASPALRSIRQSLRSEESKVRQKLESLTRGANATKMLSD 189
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I IT R R + +K ++ GI + S+SG T F+EP ++ NN RL
Sbjct: 190 AI----ITIRNDRFVIPVKQEYRSHY-GGIVHDQSASGQTLFIEPDAVIQSNNEVQRLKV 244
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE ILS LT + + EI L+ + E+D+ A+ + Q P ++ + +
Sbjct: 245 KEKAEIERILSELTLRVQEVGHEIFVLVQLLGEMDVILAKGKYGQANKCTMPKMNKEGYT 304
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P++ V N+
Sbjct: 305 RLVRA------RHPLL----------------PIEDAVANT------------------- 323
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I+ + +VITGPNTGGKT ++KT+GL ++M++ GL +PA + L F+ I ADIGD
Sbjct: 324 IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTIMAQCGLPVPALDGSELAVFEQIFADIGD 383
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL + +SL+L DE+G+GTDP EG ALA +IL DR
Sbjct: 384 EQSIEQSLSTFSSHMVNIVDILSKFNEKSLILFDELGAGTDPQEGAALAIAILDETVDRG 443
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ T+HY +L NA+ EF +ETL PTYR+L G G SNA I+K +G
Sbjct: 444 ARVMATSHYPELKAYGYNRPSVVNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLS 503
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I A+ R H + SL E R + E +A A L + + E+E+
Sbjct: 504 SNVIDHAKSFTGTDR-----HEVESMIASLEESRLRSEREADEAHLLLEDAQKIRAELEE 558
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ D + +L+ K + ++ ++ AK + +T++ + +A+ +KE E
Sbjct: 559 RLRIYDEKKENLEKKAKDKARKIVDDAKKEAETIIAELRKMKENAALS-----VKEHE-- 611
Query: 562 IAAIVEAHR------PDDDFSVSETNTSSF----TPQFGEQVHVKSLGDKLATVVEVPGD 611
+++A + P D+ V + ++ Q G++V V S G K T+++ G+
Sbjct: 612 ---LIDAKKRLDNAAPIDNNKVLQKAVAARERKQNLQVGDEVKVLSYGQK-GTLLQKAGN 667
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ +VQ G +++++ ++++ + +++ A P ++
Sbjct: 668 E--WVVQIGILKMKLPESDLEYV-KPEKEQATRPMMNVKN-------------------- 704
Query: 672 PRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
R K LDLRG R EEA LD AL R + +IHG GTG +++ + L
Sbjct: 705 -RNSVVKLELDLRGERYEEALIRTEKYLDDALLANYPR--VSIIHGKGTGALRQGIQNFL 761
Query: 728 RNHPRVA--KYEQESPMNYGCTVAYIK 752
+NH RV +Y + +G TV +K
Sbjct: 762 KNHKRVKSYRYGEAGEGGFGVTVVELK 788
>gi|347752968|ref|YP_004860533.1| MutS2 family protein [Bacillus coagulans 36D1]
gi|347585486|gb|AEP01753.1| MutS2 family protein [Bacillus coagulans 36D1]
Length = 784
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 229/747 (30%), Positives = 358/747 (47%), Gaps = 93/747 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 71
L ++ LT LE +I +D I LD ASE L IR +R E L+ ++
Sbjct: 119 LTSMVDRIAVLTPLEHEIRNAVDENGEI-LDSASETLRQIRHGLRGTERRIREKLEGYIR 177
Query: 72 -KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K AA++ + +IT R R C+ +K ++ GI + SSSG T F+EP+ V
Sbjct: 178 GKNAAKM-----LSDAIITIRNDRYCIPVKQEYRANY-GGIVHDQSSSGQTLFIEPQSVV 231
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN E E ILS L+A +A + E++ +++ + + D FA+A + + + G
Sbjct: 232 DLNNQLREWHLKEQQEVERILSELSAAVAAAGGELETIVEILADFDFMFAKALYGRSIKG 291
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P++++ +I + +HPLL P
Sbjct: 292 SKPVINNHG------AIRMFKARHPLL----------------P---------------- 313
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
+D VP DI + E +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +
Sbjct: 314 ---ADKVVPNDITIGQEYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEMA 370
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V +SLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAALA 430
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL + R V TTHY +L NA+ EF +ETL PTYR+L G G SN
Sbjct: 431 ISILDEVYKREARVVATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRSN 490
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I++ +G II+ AQ L+ E + + +L RR+ E + + A L
Sbjct: 491 AFEISRRLGLSPSIIEHAQSLIGADTNEVEN-----MIAALESARREAEKERQEAQELLK 545
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
+ +L+R+++ + R L K ++ + + AK + + +++D ++ A+
Sbjct: 546 DAEELHRDLQKQMAAFYARRDELYGKAEKKAAKVVEEAKEKAEEIIRDLRKMQLESKAN- 604
Query: 551 INSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+KE E A +E P D + Q G++V V S K + +
Sbjct: 605 ----VKEHELIDARKQLEELAPKLDRKPAAKAKKQHIYQPGDEVKVLSFNQKGTLLEQTA 660
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
G + LVQ G ++++VK++++ I P +KQ E + G + +
Sbjct: 661 GGE--WLVQMGILKMKVKESDMEYI-----------RPPQQKQPEKHLATVRGRDSHVSL 707
Query: 670 YGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLE 725
LDLRG R E+A +D AL R + +IHG GTG ++ V E
Sbjct: 708 ----------ELDLRGERYEDALLKVEKYIDDALLAGYPR--VSIIHGKGTGALRNGVQE 755
Query: 726 ILRNHPRVAKYEQESPMNYGCTVAYIK 752
L++H V + P G V ++
Sbjct: 756 FLKHHRAVKRIRLGEPGEGGSGVTIVE 782
>gi|182417186|ref|ZP_02948554.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237668115|ref|ZP_04528099.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379028|gb|EDT76534.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237656463|gb|EEP54019.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 786
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 349/702 (49%), Gaps = 88/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS L IR R+++ +S +++ + I ++ + L T R R + +K+
Sbjct: 145 ISDKASATLYNIR----RSLKEKNSSVREKISSIVRSHSKYLQDDLYTMRGDRYVIPVKS 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P GI + SS+GAT+F+EP V NN L E AE IL+ L+ ++ ++
Sbjct: 201 EYKSAVP-GIVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIDRILAELSFKVKEN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ ++E D FA+A + + ++ V P++ D NI +HP++
Sbjct: 260 SEQCLSNFKMLVEFDFIFAKARYGERLNAVRPLIRE------DGRFNIYSGRHPMI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
D VP D+ + + ++ITGPNTGGK
Sbjct: 310 -------------------------------DDDKVVPSDVYIGEDFDTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++K +GL +M +GL +PA+++ L +F + A+IGD QS+EQNLSTFS H++ IV+
Sbjct: 339 TVTIKMVGLLHIMGLSGLLIPARDNSSLSFFTEVFAEIGDEQSIEQNLSTFSSHMTNIVE 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I+ V +SLVL DEIGSGTDP+EG ALA SI++ LR R + TTHY++L K
Sbjct: 399 IMRYVDDKSLVLFDEIGSGTDPAEGAALAISIIETLRSRKSRIIATTHYSELKAYALKTD 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA+ + E L+ E
Sbjct: 459 GVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKAYMSEENLQFEN 518
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKE 517
L + L E+ + +AR A++L E +L ED+ + L+ R A++ A+
Sbjct: 519 -------LIRDLQEKSIVAKKEAREASALKKEAEELKLRYEDKLQKLEKARDKAYMDAR- 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+ ++ + AK + D +++ + + ++E + +E H+ ++
Sbjct: 571 -HEAKEIIANAKEEADEILKAMRALEKMGIEGGGRARLEEERKKLKDSLE-HKEKGLHNM 628
Query: 578 SETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
E T G + + SL ++ ++ +P + V V+ G M++ VK ++R
Sbjct: 629 KENEGEPITNVTLGMEAFLPSL-NQTVVIISMPDNRGDVQVEAGIMKINVKLKDLRKTKV 687
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
+K++ ++ SN E+ +DLRGM EEA ++ D
Sbjct: 688 TKQEKVKK-----------KREVKLNLSNIES-----------RVDLRGMDSEEACYKTD 725
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L A + + ++HG GTGV++ + +L+ HP V +
Sbjct: 726 KYLDDAYRANLGEVTIVHGKGTGVLRNAITAMLKRHPHVKSF 767
>gi|379727500|ref|YP_005319685.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
gi|376318403|dbj|BAL62190.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
Length = 789
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 219/728 (30%), Positives = 357/728 (49%), Gaps = 108/728 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +N E L+ L++ A+ + +IT R R + +
Sbjct: 146 VTDEASPELKNIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K HK G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A
Sbjct: 201 KQEHKNTF-GGVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+EI + + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 260 PYYKEILRNAEIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
K +S+ DI + + + +VITGPNTG
Sbjct: 312 ----------------------------DHDKAVSN-----DITIGEDYQTIVITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ I
Sbjct: 339 GKTITLKTIGLLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I+E V + SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L
Sbjct: 399 VSIIEKVDKNSLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF+++TL PTYR+L G G SNA +I+K +G + KII A++++ E
Sbjct: 459 RSGTINASMEFNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL 518
Query: 460 QQHRKSELYQSLMEERRKLESQAR-------TAASLHAEIMDLYR----EIEDEAKDLDR 508
+E+ L R+ E++ + A L E+ ++YR E E+E + ++
Sbjct: 519 -----NEMIADLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYFHQERENEMEKANK 573
Query: 509 RAAHLKAKETQQVQQELN-FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAI 565
+A + K ++ + K+Q++T Q E+QL DA N ++++E +
Sbjct: 574 QANSIVKKAQEEADAIIKEIRKMQLNTNQQTTIKEHQLIDAKTKLSN--LQQTEEHL--- 628
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
+ V + + G++V V++ G + ++ D + VQ G +++
Sbjct: 629 -------EKNKVLKKAKAKKQLNAGDEVIVETYGQHGTLLKKL--DKEHWQVQLGILKMP 679
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V + ++ I + + P P LR +E S+ P + LD+RG
Sbjct: 680 VAEEDL-TIVTAVNEQEQRPMPTLRSSKE--------------SHVP------SQLDVRG 718
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A S + ++HG GTG ++E + L+NH VA + +P N
Sbjct: 719 KRYEEAMVEVDQYLDSAILAGYSQVTIVHGKGTGALREGITNDLKNHRSVASF-AFAPAN 777
Query: 744 YGCTVAYI 751
G A I
Sbjct: 778 QGGNGATI 785
>gi|222524571|ref|YP_002569042.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
gi|222448450|gb|ACM52716.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
Length = 819
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 222/770 (28%), Positives = 355/770 (46%), Gaps = 106/770 (13%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAE 58
+L Q + R+ L++L + L E I I D + +LD AS L +R E
Sbjct: 103 LLRQRLSRLDERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHE 159
Query: 59 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 118
+ L L+ + AG + +P+IT R R + +KASH+ + G+ + S S
Sbjct: 160 VRVAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGS 218
Query: 119 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 178
GAT ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLA
Sbjct: 219 GATLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLA 278
Query: 179 FARAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 235
FA A +A P + S + + + +HPLL ++
Sbjct: 279 FALARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV------------- 325
Query: 236 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 295
VPID+ + E +++ITGPNTGGKT ++KT GL +LM+
Sbjct: 326 ----------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMA 363
Query: 296 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR------- 348
+AG+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 364 QAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSE 423
Query: 349 ------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 424 SDAYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAF 483
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ +
Sbjct: 484 AYTTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI---- 539
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDR 508
+R++ + +L + ER + + A L + + YR+ E
Sbjct: 540 -DRKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALE 597
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 568
A E ++V+Q+L + + TV + Q + + + + ++S+ A+A
Sbjct: 598 AARAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA----- 650
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
R + + + Q G+QV V S+G +V + +D T VQ G R+ V
Sbjct: 651 -RLNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSF 708
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
N+++ R + + +D Q + + P V + D+RG R
Sbjct: 709 NDLK---------------RAKGKSDDGQRFTPPARTVHLPPTPDVSM---TFDMRGWRA 750
Query: 689 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
E S +LD L A + +IHG GTG +++ V E+L HP VA +
Sbjct: 751 AEVSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRELLAGHPLVASF 800
>gi|365135255|ref|ZP_09343723.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
gi|363612692|gb|EHL64223.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
Length = 795
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 217/716 (30%), Positives = 352/716 (49%), Gaps = 108/716 (15%)
Query: 46 DRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS+ L IR A + LD++ K +A + + +++ R R V +KA
Sbjct: 145 DTASDTLYDIRRKIHAAENSIRDKLDAITKSQSASRY----LQDAVVSLRNGRFVVPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
H+ + G+ +VSSSG+T F+EP VE N ++L N E AE IL+ +A+ A
Sbjct: 201 EHRGEV-GGVIHDVSSSGSTLFVEPTAVVEANAKILQLRNLEQAEIERILAAFSAQTAAL 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
E + + +LE+D+ A+A A + P V+ D + ++ +HPL+ +
Sbjct: 260 EPMFTFGYEAMLELDVLLAKARLALDQKAMKP------QVNDDHAFSLVRARHPLIDPAV 313
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+ VP+DI + +VITGPNTGGK
Sbjct: 314 V-----------------------------------VPVDIALGGAYDTLVITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL M++ G +PA + F IL DIGD QS+EQ+LSTFSGHI I
Sbjct: 339 TVTLKTAGLLCAMAQHGYLIPAHESSSVCVFGEILVDIGDEQSIEQSLSTFSGHIKNITG 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
IL+L ++LVL+DE+G+GTDP+EG ALA S+++ LR + TTHY++L
Sbjct: 399 ILKLAGPQTLVLMDELGAGTDPAEGAALAVSVIEALRGLGAKIMATTHYSELKIFALDTP 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
+NA+ EF++ETLRPTYR+ G G SNA I++ +G +II+ A+ E L E QQ
Sbjct: 459 GVQNASCEFNVETLRPTYRLSVGVPGKSNAFLISQKLGLAPEIIENAR---EHLSNEDQQ 515
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-------K 514
+ L + + +L++Q +DE + L A+H +
Sbjct: 516 F--DNILNQLEDLKVELKAQ------------------QDEVERLKHTASHALEQAEEKR 555
Query: 515 AKETQQVQQELNFAKVQIDTVVQDFEN-------QLRDASAD-EINSLIKESESAIAAIV 566
A +Q ++EL A+ + +VQD +N +LR D ++N+ + + + A
Sbjct: 556 AALIRQGEEELAAAREKAHGMVQDVQNTAYGLMDELRKLEKDKQLNASQRAARAREIAKK 615
Query: 567 EAHRPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
E + V +F P + G++V + L DK V +P D V V+ G +
Sbjct: 616 ETEKLFGKTDVVHAPQRTFKPLDSVKLGQEVLIAEL-DKPGIVTALPDRDGMVEVRAGII 674
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
+ +V N + P+ ++ PAP +K+ + R++ ++ S ++ + P ++ ++
Sbjct: 675 KTKVPLNGL-CAPHKQQ-----PAP--QKKYQPRRAPASASGGDKVTRTPSME-----IN 721
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L GM VEEA H+ D I ++ L++IHG GTG +++ + E LR H V +
Sbjct: 722 LIGMTVEEALHEADKFIDNGVMNGQTTLYLIHGKGTGALRKGIHEHLRRHKNVRSF 777
>gi|327475225|gb|AEA77207.1| MutS2 [Bacillus aquimaris]
Length = 786
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 223/719 (31%), Positives = 338/719 (47%), Gaps = 88/719 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
ILD ASE L IR + + N + L+K+ + +IT R R + +K +
Sbjct: 146 ILDSASETLRSIRTQLRSNESRIREKLEKMTRSSNAQKMLSDAIITIRNDRYVIPVKQEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ GI + SSSG T F+EP+ V NN L E E IL L+ E+ ++
Sbjct: 206 RGHY-GGIIHDQSSSGQTLFIEPEAIVALNNQLRELRLKEQTEIEKILLALSVEVQEAAE 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ ++ + ++D F +A F + + G PI++++ + + + +HPLL
Sbjct: 265 ELLLIVSILSDVDFMFTKAKFGRSIKGSKPIINNEGRIKLNKA------RHPLL------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
P++ V N DI++ E +VITGPNTGGKT
Sbjct: 313 ----------PIEEAVAN-------------------DIELGKEFSSIVITGPNTGGKTV 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL ++M++AGL +PA + + F I ADIGD QS+EQ+LSTFS H+ IV+IL
Sbjct: 344 TLKTLGLTNMMAQAGLPIPALDDSEVGIFRSIYADIGDEQSIEQSLSTFSSHMVNIVEIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V ESLVL DE+G+GTDP EG ALA SIL + + V TTHY +L
Sbjct: 404 EKVDHESLVLFDELGAGTDPQEGAALAISILDEVHGKGARVVATTHYPELKAYGYNREGV 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF +ETL PTY++L G G SNA I+K +G +I RA+ + E +
Sbjct: 464 VNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDSVILRAKSHIGTDTKEVEN-- 521
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+ SL E RR+ E + A L + ++++++ + + + L K +
Sbjct: 522 ---MIASLEENRRQGEKELEEAHELLRQAEKMHKDMQKQMMEYYEKKDQLYEKAQLKASD 578
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDDFSV--SE 579
+ AK + D V++D ++ SA IKE E A + EA SV S+
Sbjct: 579 LVEKAKEEADQVIKDLRRMQKEKSAQ-----IKEHELIHAKKQLEEATPKLKKSSVQKSK 633
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
N + G++V V S K + +V + VQ G M+++VK++++ I S++
Sbjct: 634 GNNGKQVLKAGDEVKVLSFDQKGHLIEKVSSKEWQ--VQMGIMKMKVKESDLEFI-QSQQ 690
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQL 695
K P ++ G S LDLRG R E A +
Sbjct: 691 KVETKPLATVK--------------------GKDFHVSLE-LDLRGERFENALSRVEKYI 729
Query: 696 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
D AL R + +IHG GTG +++ V E L NH V ++ G TV K
Sbjct: 730 DDALLAGYPR--VSIIHGKGTGALRQGVQEYLNNHRSVKSIRFGDAGEGGTGVTVVQFK 786
>gi|406665755|ref|ZP_11073526.1| MutS2 protein [Bacillus isronensis B3W22]
gi|405386274|gb|EKB45702.1| MutS2 protein [Bacillus isronensis B3W22]
Length = 788
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 221/742 (29%), Positives = 354/742 (47%), Gaps = 99/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L+ +I CID +LD AS L IR +E + + L+SL + A +
Sbjct: 131 LTALQHEINDCIDDNG-TVLDSASPALRSIRQSLRSEESKVRQKLESLTRGSNATKMLSD 189
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I IT R R + +K ++ GI + S+SG T F+EP ++ NN RL
Sbjct: 190 AI----ITIRNDRFVIPVKQEYRSHY-GGIVHDQSASGQTLFIEPDAVIQSNNEVQRLKV 244
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE ILS LT ++ + EI L+ + E+D+ A+ + Q P ++ + +
Sbjct: 245 KEKAEIERILSELTLKVQEVGHEIFVLVQLLGEMDVILAKGKYGQANKCTMPKMNKEGYT 304
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P++ V N+
Sbjct: 305 RLVRA------RHPLL----------------PIEDAVANT------------------- 323
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I+ + +VITGPNTGGKT ++KT+GL ++M++ GL +PA + L F+ I ADIGD
Sbjct: 324 IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTIMAQCGLPVPALDGSELAVFEQIFADIGD 383
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL + +SL+L DE+G+GTDP EG ALA +IL DR
Sbjct: 384 EQSIEQSLSTFSSHMVNIVDILSKFNEKSLILFDELGAGTDPQEGAALAIAILDETVDRG 443
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ T+HY +L NA+ EF +ETL PTYR+L G G SNA I+K +G
Sbjct: 444 ARVMATSHYPELKAYGYNRPSVVNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLS 503
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I A+ R H + SL E R + E +A A L + + E+E+
Sbjct: 504 SNVIDHAKSFTGTDR-----HEVESMIASLEESRLRSEREADEAHLLLEDAQKIRAELEE 558
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ D + +L+ K + ++ ++ AK + +T++ + +A+ +KE E
Sbjct: 559 RLRIYDEKKENLEKKAKDKARKIVDDAKKEAETIIAELRKMKENAALS-----VKEHELI 613
Query: 562 -IAAIVEAHRPDDDFSVSETNTSSF----TPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
+ ++ P D+ V + ++ Q G++V V S G K T+++ G++ +
Sbjct: 614 DVKKRLDNAAPIDNNKVLQKAVAARERKQNLQVGDEVKVLSYGQK-GTLLQKAGNE--WV 670
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
VQ G +++++ ++++ + +++ A P ++ R
Sbjct: 671 VQIGILKMKLPESDLEYV-KPEKEQATRPMMNVKN---------------------RNSV 708
Query: 677 SKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
K LDLRG R EEA LD AL R + +IHG GTG +++ + L+NH R
Sbjct: 709 VKLELDLRGERYEEALIRTEKYLDDALLANYPR--VSIIHGKGTGALRQGIQNFLKNHKR 766
Query: 733 VA--KYEQESPMNYGCTVAYIK 752
V +Y + +G TV +K
Sbjct: 767 VKSYRYGEAGEGGFGVTVVELK 788
>gi|406026859|ref|YP_006725691.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
gi|405125348|gb|AFS00109.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
Length = 788
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 221/726 (30%), Positives = 334/726 (46%), Gaps = 101/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
ILD AS L IR N+ S + K + A + +P+IT R R + IKA +
Sbjct: 147 ILDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEPIITVRDGRFVLPIKAEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + S+SG T ++EP VE NN R +E AE IL+ LT I
Sbjct: 206 KQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAEVRRILAELTNLIRPHRD 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ MD V ++D A+A FA V P VS + IN+ +HPL+
Sbjct: 265 ELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNVINLRKARHPLI------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
P V N DI++ + +++TGPNTGGKT
Sbjct: 313 ----------PRDQVVAN-------------------DIELGDQYNTIIVTGPNTGGKTI 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ IL
Sbjct: 344 TIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIEANLSTFSSHMDNIISIL 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ S++SLVL+DE+G+GTDP EG ALA +I+ G + TTHY +L
Sbjct: 404 KQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIATTHYPELKAFAYNRQGI 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF +ETL+PTYR L G G SNALNIA +G II +A+ + +
Sbjct: 464 INASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPEAIIDQARAFT-----DSENQD 518
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+ + + L + ++ +A E L +++D+ + + L + QQ Q
Sbjct: 519 INNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKYESQKERLVEQAKQQANQ 578
Query: 524 ELNFAKVQIDTVVQDF-------------ENQLRDASADEINSLIKESESAIAAIVEAHR 570
+ AK + D ++ D EN+L DA +N L ++ +
Sbjct: 579 VVEEAKKKADRIIDDLHQKQAQVGKVAVKENELIDAKG-ALNQLESAPSLTKNKVLRKEK 637
Query: 571 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
DF G+ V VKS G + T++ + T VQ G +++++++++
Sbjct: 638 AKHDF------------HPGDDVLVKSYGQQ-GTLLR-KDKNHTWDVQIGILKMQIEESD 683
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
+ A PA +Q+ Q + S P +LDLRG R EE
Sbjct: 684 LE---------KATPA-----KQDKNQYQTHVSRTRSTGMSP-------TLDLRGHRYEE 722
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGC 746
A ++D I A + +IHG GTG +++ V E L+ +PRV + +P G
Sbjct: 723 AMTEVDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLKRNPRVKSFGYSAPNAGGDGS 782
Query: 747 TVAYIK 752
TV +K
Sbjct: 783 TVVKLK 788
>gi|307288101|ref|ZP_07568111.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|422704386|ref|ZP_16762196.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
gi|306500837|gb|EFM70155.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|315164284|gb|EFU08301.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
Length = 788
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 231/753 (30%), Positives = 362/753 (48%), Gaps = 124/753 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
L EL ++ ID + D AS L+ IR +R+ E LDS+++ A+
Sbjct: 129 LPELNRQLKQAIDDDGYVT-DEASPALKAIRQNIRRSEQTIREELDSIIRGKNARY---- 183
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ L+T R R + +K +K + G+ + S+SG T F+EPK +E NN RL
Sbjct: 184 -LSDALVTMRNERYVIPVKQEYKNIF-GGVVHDQSASGQTLFIEPKQILEMNN---RLRQ 238
Query: 142 SEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+IAE T IL+ L+AE+ REI + + ++D A+A + + V P +S
Sbjct: 239 QQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQA 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+HV F + +HPLL +P K+ V
Sbjct: 299 NHVVFKQA------RHPLL---------------DPEKA--------------------V 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + E + +VITGPNTGGKT ++KTLGL LM +AGL +P + ++ F + AD
Sbjct: 318 ANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ V +SLVL DE+G+GTDP EG ALA +IL L
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ + TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 438 AKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRL 497
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES----QAR----TAASLHA 490
G D II+ A++++ + + +E+ + L E RRK+ +AR +A+LH
Sbjct: 498 GLDNSIIEAAKQIM-----DGESQDLNEMIEDL-ENRRKMAETEYLEARHYVDESAALHK 551
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFEN-QLRD 545
E+ + Y+ +E + KE Q+ ++E N A+ +T++ D QL
Sbjct: 552 ELKEAYQVFFEE-----------REKELQKARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 546 ASADEINSLIKESE--SAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGD 600
+KE + A + + H + + V + + G++V V + G
Sbjct: 601 GQ----QGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQ 656
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
+ T+++ G VQ G +++ V + ++ P+ K PR+ + S
Sbjct: 657 R-GTLLKDNGKGQW-QVQLGILKMNVSEEDMTPVAPQKEAK-----PRVTTVR------S 703
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
A SS+ LDLRG R EEA ++D I A + ++HG GTG
Sbjct: 704 AESSH-----------VSTQLDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGA 752
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++ + E L++H V YE +P N G A +
Sbjct: 753 LRTGITEFLKHHRSVKSYEF-APQNQGGNGATV 784
>gi|163846758|ref|YP_001634802.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
gi|163668047|gb|ABY34413.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
Length = 823
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 222/770 (28%), Positives = 355/770 (46%), Gaps = 106/770 (13%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAE 58
+L Q + R+ L++L + L E I I D + +LD AS L +R E
Sbjct: 107 LLRQRLSRLDERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHE 163
Query: 59 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 118
+ L L+ + AG + +P+IT R R + +KASH+ + G+ + S S
Sbjct: 164 VRVAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGS 222
Query: 119 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 178
GAT ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLA
Sbjct: 223 GATLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLA 282
Query: 179 FARAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 235
FA A +A P + S + + + +HPLL ++
Sbjct: 283 FALARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV------------- 329
Query: 236 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 295
VPID+ + E +++ITGPNTGGKT ++KT GL +LM+
Sbjct: 330 ----------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMA 367
Query: 296 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR------- 348
+AG+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 368 QAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSE 427
Query: 349 ------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 428 SDAYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAF 487
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ +
Sbjct: 488 AYTTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI---- 543
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDR 508
+R++ + +L + ER + + A L + + YR+ E
Sbjct: 544 -DRKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALE 601
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 568
A E ++V+Q+L + + TV + Q + + + + ++S+ A+A
Sbjct: 602 AARAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA----- 654
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
R + + + Q G+QV V S+G +V + +D T VQ G R+ V
Sbjct: 655 -RLNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSF 712
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
N+++ R + + +D Q + + P V + D+RG R
Sbjct: 713 NDLK---------------RAKGKSDDGQRFTPPARTVHLPPTPDVSM---TFDMRGWRA 754
Query: 689 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
E S +LD L A + +IHG GTG +++ V E+L HP VA +
Sbjct: 755 AEVSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRELLAGHPLVASF 804
>gi|282850354|ref|ZP_06259733.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ATCC 17745]
gi|282579847|gb|EFB85251.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ATCC 17745]
Length = 812
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 203/701 (28%), Positives = 339/701 (48%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++++ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVSLMRARHPLI--- 327
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P ++ VP +I++ R+++ITG NTGG
Sbjct: 328 -------------P-------------------TNMVVPTNIQLGTSYRILLITGSNTGG 355
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 531
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R EI + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDEIRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ + Q + + D+ S I + I+++ P DD S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRQSAINAARKRISSVHVPEAPVDDDRKSLT 651
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 AREQKEAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTGV++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGVLREGVHQYLRTLPHVAHFE 795
>gi|424779902|ref|ZP_18206788.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
gi|422843441|gb|EKU27878.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
Length = 790
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 216/690 (31%), Positives = 341/690 (49%), Gaps = 111/690 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R + +KA ++ G+ + S++G T F+EPK VE NN ++ E E
Sbjct: 186 VITMRSDRYVIPVKAEYRNQF-GGMVHDQSATGQTLFIEPKAIVELNNRRQQMKVEEKEE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L EI +EI+ + ++D+ A+A A M P +S+ SF +
Sbjct: 245 VQRILAQLIQEIMPHRQEIQQNAYHLGQLDVIQAKAKLAAEMKACIPEMSTTQSFSFLQA 304
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPLL NP + VP DI +
Sbjct: 305 ------RHPLL---------------NP--------------------ETVVPNDIYLGE 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
E + ++ITGPNTGGKT ++KT+GL LM + G+ +P + FD I+ DIGD QS+E
Sbjct: 324 EFQSLLITGPNTGGKTITLKTVGLLQLMLQTGMAIPVAEESTMTIFDQIMVDIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFSGH+ I+ IL+ V R SLVL+DE+G+GTDP EG ALA +IL L + L +
Sbjct: 384 QSLSTFSGHMKNIIQILDRVGRHSLVLLDELGAGTDPQEGAALAIAILNRLLQKGALTLC 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY +L + NA+ EF ++TL PTYR+L G+ G SNA I+ +G D +I
Sbjct: 444 TTHYPELKVYAYNEPHTCNASMEFDVQTLSPTYRLLIGAPGSSNAFEISLRLGLDPTLIT 503
Query: 447 RAQK-----------LVERLRPERQQHRKSE-LYQSLMEERRKLESQARTA-ASLHAEIM 493
A++ ++E+L RQ + + E + + E L+ + + A A+ E
Sbjct: 504 EAKENMDHQTGDLANMIEQLENARQGYEEKEHAFTEKLSETEALQKELKEAFAAFKKEKA 563
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT-VVQDFENQLRDASADEIN 552
L +E + EA + +A+ ++AKE + Q+L + +DT V++ E A+ ++N
Sbjct: 564 HLLKEAKKEANQVVEKAS-VEAKE---IIQDLKEKQEHLDTKAVKEHE---LIAAQTQLN 616
Query: 553 SLIKESESAIA--AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
L E E + +++ + +V G++V V+S G + T+V P
Sbjct: 617 HLKSEEEQHLLKNKVLQREKKKQALAV------------GDEVLVESYGQR-GTLVR-PF 662
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D T VQ G ++++ +P S+ R +K QE ++ + + S
Sbjct: 663 KDGTWEVQLGILKMK--------LPESE-------FTRTKKAQEQQKETTMTTIQRSNSK 707
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQ----LDIAL-ACWESRSVLFVIHGMGTGVVKERVLE 725
G K SLDLRG R EEA + LD AL A + S + ++HG GTG +++ + +
Sbjct: 708 G-----VKASLDLRGERYEEAMQKVEQYLDQALVAGYHS---VTLVHGKGTGALRQGIQK 759
Query: 726 ILRNHPRVAKYEQESPMNY---GCTVAYIK 752
+L+ H + +E +P N G T+ Y K
Sbjct: 760 LLQRHRHIDHFEY-APANAGGNGATIVYFK 788
>gi|332686481|ref|YP_004456255.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
gi|332370490|dbj|BAK21446.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
Length = 789
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 218/728 (29%), Positives = 355/728 (48%), Gaps = 108/728 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +N E L+ L++ A+ + +IT R R + +
Sbjct: 146 VTDEASPELKNIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K HK G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A
Sbjct: 201 KQEHKNTF-GGVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+EI + + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 260 PYYKEILRNAEIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
K +S+ DI + + + +VITGPNTG
Sbjct: 312 ----------------------------DHDKAVSN-----DITIGEDYQTIVITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ I
Sbjct: 339 GKTITLKTIGLLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I+E V + SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L
Sbjct: 399 VSIIEKVDKNSLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF+++TL PTYR+L G G SNA +I+K +G + KII A++++ E
Sbjct: 459 RSGTINASMEFNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL 518
Query: 460 QQHRKSELYQSLMEERRKLESQAR-------TAASLHAEIMDLYREIEDEAKDLDRRAAH 512
+E+ L R+ E++ + A L E+ ++YR + E ++ +A
Sbjct: 519 -----NEMIADLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYLHQERENEMEKANK 573
Query: 513 LKAKETQQVQQELN-----FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAI 565
++ Q+E + K+Q++T Q E+QL DA N ++++E +
Sbjct: 574 QANSIVKKAQEEADAIIKEIRKMQLNTNQQTTIKEHQLIDAKIKLSN--LQQTEEHL--- 628
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
+ V + + G++V V++ G + ++ D + VQ G +++
Sbjct: 629 -------EKNKVLKKAKAKKQLNAGDEVIVETYGQHGTLLKKL--DKEHWQVQLGILKMP 679
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V + ++ I + + P P LR +E S+ P + LD+RG
Sbjct: 680 VAEEDL-TIVTAVNEQEQRPMPTLRSSKE--------------SHVP------SQLDVRG 718
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A S + ++HG GTG ++E + L+NH VA + +P N
Sbjct: 719 KRYEEAMVEVDQYLDSAILAGYSQVTIVHGKGTGALREGITNDLKNHRSVASF-AFAPAN 777
Query: 744 YGCTVAYI 751
G A I
Sbjct: 778 QGGNGATI 785
>gi|373857569|ref|ZP_09600310.1| MutS2 family protein [Bacillus sp. 1NLA3E]
gi|372452701|gb|EHP26171.1| MutS2 family protein [Bacillus sp. 1NLA3E]
Length = 785
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 226/731 (30%), Positives = 343/731 (46%), Gaps = 94/731 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLK 71
L+E + L ELE+ I ID + LD AS L +R++ R E LDS+++
Sbjct: 119 LVEFSEQIIVLAELEQSIKMAIDDNGEV-LDGASATLRSLRHQLRSKEARVREKLDSMIR 177
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
AQ + LIT R R + +K ++ GI + SSSG T F+EP+ VE
Sbjct: 178 SSNAQKM----LSDALITIRNDRFVLPVKQEYRSHY-GGIIHDQSSSGQTLFIEPQSIVE 232
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN + E E IL LTA +A+ + ++ ++ + E+D FA+A +A+ +
Sbjct: 233 LNNELQGIRLKEEQEIQRILIELTAHVAEYQEDLATVVVVLTELDFMFAKARYAKRIKAS 292
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P ++ + + + + +HPL+ P+ V N
Sbjct: 293 KPTMNHEGRIFLNKA------RHPLI----------------PIDEVVAN---------- 320
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +
Sbjct: 321 ---------DITIGIDFSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQVPAFDGSEMAV 371
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD + ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA
Sbjct: 372 FDEVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDSNSLVLFDELGAGTDPQEGAALAI 431
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SIL + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 432 SILDEVYKRSAKVIATTHYPELKAYGYNREGVSNASVEFDVETLSPTYKLLIGVPGRSNA 491
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G D +I+ A+ V ++ + SL RR+ E + L
Sbjct: 492 FEISRKLGLDESVIENARSHV-----SADTNQIENMISSLEASRRQAEIEQEETNELLRN 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
L+ ++ E R + K + + + AK + + V++D + A+
Sbjct: 547 AEKLHDNLQKEMIAFYDRKDQMFEKAEDEALEIVEKAKSEAEGVIRDLRKMRIEKQAE-- 604
Query: 552 NSLIKESESAIAAI-VEAHRPDDDFSVS----ETNTSSFTPQFGEQVHVKSLGDKLATVV 606
+KE E A +EA P S T SFT G++V V S G K +
Sbjct: 605 ---VKEHELIDAKKRLEAAAPTKTVKRSPVKQATKKHSFTA--GDEVKVVSFGQKGLLIN 659
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+ D VQ G ++++V++ ++ I +PAP QE R +
Sbjct: 660 KTS--DHGWQVQIGILKMKVEEEDLIYI--------GSPAP-----QEKRHLATVRGKEY 704
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVL 724
S LDLRG R E A +++ I A S + +IHG GTG +++ V
Sbjct: 705 HVSL---------ELDLRGERFENALMRVEKYIDDALLASYPRVSIIHGKGTGALRQGVQ 755
Query: 725 EILRNHPRVAK 735
+ L+NH V K
Sbjct: 756 DYLKNHRSVKK 766
>gi|253579597|ref|ZP_04856866.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849098|gb|EES77059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 793
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 212/707 (29%), Positives = 339/707 (47%), Gaps = 91/707 (12%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS +L IR K R L SL+ A Q +IT R R C+ +
Sbjct: 145 ISDDASSNLRQIRRNMKITGDRIHTQLSSLVNGSARNYLQ-----DSVITMRNGRYCIPV 199
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA +K +P G+ + SS+G+T F+EP V+ NN L E E ILS L+ + A
Sbjct: 200 KAEYKGQVP-GMVHDQSSTGSTLFIEPMAIVKLNNDIRELELEEQKEIEVILSTLSQQTA 258
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I+ ++ ++++D+ FARA A M+ PI + + I ++ +HPL+
Sbjct: 259 EQTDSIRADLNIMVQLDVIFARASLAMDMNATEPIFNDEGR------IRLKQARHPLI-- 310
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D + + VPIDI++ + ++VITGPNTG
Sbjct: 311 ------------------DKKKA---------------VPIDIRLGDDFDLLVITGPNTG 337
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL +LM ++GL++P + L F+ + ADIGD QS+EQ+LSTFS H++ +
Sbjct: 338 GKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFEEVYADIGDEQSIEQSLSTFSSHMTNV 397
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V L+ +R SLVL DE+G+GTDP+EG ALA +IL +L ++ + TTHY++L
Sbjct: 398 VSFLKKANRHSLVLFDELGAGTDPTEGAALAIAILSHLHEQGIRTMATTHYSELKVYALS 457
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ ENA EF +ETLRPTYR+L G G SNA I+ +G II +A++ +
Sbjct: 458 TSGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDYIIDKAKEQI-----SE 512
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
Q ++ SL R +E++ R EI L E+E + + L+ + + + +
Sbjct: 513 QDESFEDVLSSLESSRITIENERREIEQYKQEIASLKSEMESKQEKLNEQRDRIIRQANE 572
Query: 520 QVQQELNFAKVQIDTVVQ---DFENQLRDASADE-----INSLIKESESAIAAIVEAHRP 571
+ L AK D ++ F+ D SA E + + ++E + A +P
Sbjct: 573 EAHAVLREAKEYADQTMKMFHKFQKDHVDLSAVEKERQNLRKHMNKAEKGMTQKTAAKKP 632
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+ + + + G+ V V S+ K TV P + + VQ G +R +V +++
Sbjct: 633 KKELTAKDIS-------LGDAVKVLSMNLK-GTVSSRPDNKGFLFVQMGIIRSKVHISDL 684
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
I ++ P + + R S +A S E ++L G V+EA
Sbjct: 685 ELIDEAE---ITTPTMQRTGAGKIRMSKAAHVSTE--------------INLLGKTVDEA 727
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+LD L A + ++HG GTG +++ V L+ V +
Sbjct: 728 IAELDKYLDDAYIAHLKSVRIVHGKGTGALRKGVHNYLKRQKHVESF 774
>gi|442804258|ref|YP_007372407.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740108|gb|AGC67797.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 794
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 215/711 (30%), Positives = 331/711 (46%), Gaps = 103/711 (14%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS L IR + +R + + L + + ++T R R + +KA ++
Sbjct: 148 DYASPALAAIRRDIRRMQDAVKDKLNSIIRSAQNRKIMQDAVVTLRGDRYVIPVKAEYRS 207
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
P G+ +VS SGAT F+EP VE NN +L E E IL+ LT E+AK +
Sbjct: 208 QFP-GLVHDVSQSGATIFVEPMAVVELNNEIRQLKIKEEREVERILTELTGEVAKISEML 266
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
K + + ID FA+A + + G P+L+ + + +HPL+
Sbjct: 267 KANVKLLALIDFVFAKARLSLDLKGTEPVLNKERRIVIKKG------RHPLI-------- 312
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+P VP+DI + + +VITGPNTGGKT ++
Sbjct: 313 -------DPA--------------------VVVPVDISLGEDFTTMVITGPNTGGKTVTL 345
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KT+GL LM++AGL++PA + + F + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 346 KTMGLFVLMTQAGLHIPAAENSEMCVFTKVFADIGDEQSIEQSLSTFSAHMTNIVGILRE 405
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V SLVL DE+G+GTDP+EG ALA +IL L R + TTHY++L N
Sbjct: 406 VDENSLVLFDELGAGTDPTEGAALAKAILDRLTKRGIRTMATTHYSELKIYAMTTPGVRN 465
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE------------ 453
A EF +ETLRPTYR+L G G SNA I+ +G D II+ A++ +
Sbjct: 466 ACCEFDVETLRPTYRLLIGIPGRSNAFAISLRLGLDEGIIEEAKRFMRGEDIQFEELLSD 525
Query: 454 ----RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 509
RL E+++ R + + R+ E Q + I++ R+ EA+ +
Sbjct: 526 IQKNRLETEKERERAYRELKEIERLRQAAEEQRKKTEDEKESILNQARK---EARAILAN 582
Query: 510 AAHLKAKETQQVQQELNFAKVQ--IDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
A +A+E + +EL A Q ID + + LR + E ++ +A +
Sbjct: 583 ARR-QAEEIMERLKELEKAYQQRNIDREMMELRQNLRKT--------MNELDAQMAETIL 633
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
R D + P G+ V + +L + TV+E P D VL+Q G M+V++
Sbjct: 634 PRRGDG------KPPENLKP--GDTVMIINLNQR-GTVLEAPDKDGNVLIQAGIMKVKMH 684
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
++P+ + + R+R S + S + E LD+RG+
Sbjct: 685 ITQLKPVDEQQEVMSTIQNTRVR-------SVKSKSISLE-------------LDIRGLT 724
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
EEA ++D I A + +IHG GTG +++ V + L HP V +
Sbjct: 725 TEEARERIDKYIDDAIIAGLHEVSIIHGKGTGALRKSVHDFLSRHPHVETF 775
>gi|294501473|ref|YP_003565173.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
gi|294351410|gb|ADE71739.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
Length = 787
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 236/752 (31%), Positives = 364/752 (48%), Gaps = 119/752 (15%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+E+ I ID +LD AS+ L IR + + R E L+SL++ +AQ +
Sbjct: 130 LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKMLSD 188
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ GI + SSSGAT F+EP+ V NN L
Sbjct: 189 AI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 240
Query: 142 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+++ E+ I L++ AE+A R+ YL+ E+D FA+ ++ + P +
Sbjct: 241 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 297
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ + ++ + KHPL+ + DV
Sbjct: 298 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 318
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
V DI++ + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F +
Sbjct: 319 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 376
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ IVDIL+ V ESLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 436
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
+ +R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+
Sbjct: 437 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 496
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
K +G ++I+RA+ + + ++ + SL + RR+ E + A L E L
Sbjct: 497 KRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKL 551
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
++E++ + + + + L K ++ Q + A + + ++ D LR S +L+
Sbjct: 552 HKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKMSQKNY-ALV 606
Query: 556 KESESAIAAIVEAH-RPDDDFSVSETNTSSF--------TPQFGEQVHVKSLGDKLATVV 606
KE E ++EA R +D E + T Q G++V V S G K T+V
Sbjct: 607 KEHE-----LIEARKRLEDAVPTLEKSKKKPAAPKKQERTLQAGDEVKVLSWGQK-GTLV 660
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
E +++ VQ G M+++VK+ ++ I +S + P ++ G N
Sbjct: 661 ERVSNNEW-QVQMGIMKMKVKEKDLEYI-SSPKPVETKPLATVK--------GKDYHVNL 710
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKER 722
E LDLRG R E A +D AL R + +IHG GTG +++
Sbjct: 711 E-------------LDLRGERYENALIRVEKYIDDALLANYPR--VSIIHGKGTGALRKG 755
Query: 723 VLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V E L+NH V ++ + S G TV K
Sbjct: 756 VQEYLKNHRSVKNIRFGEASEGGSGVTVVEFK 787
>gi|218134832|ref|ZP_03463636.1| hypothetical protein BACPEC_02735 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990217|gb|EEC56228.1| MutS2 family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 812
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 229/758 (30%), Positives = 359/758 (47%), Gaps = 91/758 (12%)
Query: 14 SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSL 69
+PL E L + +T L +I CI + I D AS++L+ IR + K + L SL
Sbjct: 127 TPLFESL---DPVTSLAAEIKRCILSEDEIS-DDASQNLKDIRRKIKAGQDKIHTELTSL 182
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L + + + + +IT R R C+ +KA +K +P G+ + S++G+T+F+EP
Sbjct: 183 LNSASVRTY----LQDYVITTRNGRYCLPVKAEYKSNVP-GMVHDQSATGSTFFIEPMSV 237
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN LS E AE IL+ +++ A+ I + ++ +D AFA+A +++
Sbjct: 238 VKLNNDLKELSLKEEAEIEVILARISSHCAEYADAILTDQESLVRLDFAFAKASLSRFYK 297
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P+++ + INI+ +HPL+ +
Sbjct: 298 CSRPVMNENGY------INIKKGRHPLIEPHHV--------------------------- 324
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPIDI + + +++ITGPNTGGKT S+KT+GL +LM ++GL +PA ++ L
Sbjct: 325 --------VPIDIWLGRDFDLLIITGPNTGGKTVSLKTVGLLTLMGQSGLNIPAFDNSEL 376
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F + ADIGD QS+EQ+LSTFS H++ V IL R +L+L DEIG+GTDP+EG AL
Sbjct: 377 AVFKKVYADIGDEQSIEQSLSTFSSHMTNTVKILRYADRNTLILFDEIGAGTDPTEGAAL 436
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
AT+IL L R + TTHY++L ENA EF +E+LRPTYR+L G G S
Sbjct: 437 ATAILANLHKRGIRTIATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGVPGKS 496
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+ +G II AQ R E Q + ++ L R LE + R A L
Sbjct: 497 NAFAISSKLGLSDYIINDAQN-----RIETQDVKFEDVLTDLEGSRIALEEERREVAELK 551
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID----------TVVQDF 539
E L +++ E + + + K + + + L AK D VQ+
Sbjct: 552 EEAARLKTQLQSERAKFNEQRDRILDKASTEAARILQEAKDYADETIRVMNKHGMTVQEL 611
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
E R D++NS + I+A + P + V + S FT G +V V S+
Sbjct: 612 EKS-RTKVRDKMNS----TRERISAGRKKDEPAEPRKVHK--PSEFT--LGTRVKVLSM- 661
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
+ + TV P + VQ G +R +V +++ I NA + R ++ G
Sbjct: 662 NLVGTVSTRPDARGNLFVQMGIIRSKVNISDLEIIEEDAFGNAISKGSRTGRKPAGGLGG 721
Query: 660 SAG-SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S + +S P + +L G V+EA +LD L A + ++HG GT
Sbjct: 722 SGSIKMGKSSSISPEI-------NLLGYTVDEAVAKLDKYLDDAYLSGIPQVRIVHGKGT 774
Query: 717 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
G ++ V L+ V + ++ + G T+ K
Sbjct: 775 GALRNGVAAYLKGISYVKSFRLGEQGEGDAGVTIVEFK 812
>gi|326791035|ref|YP_004308856.1| MutS2 protein [Clostridium lentocellum DSM 5427]
gi|326541799|gb|ADZ83658.1| MutS2 protein [Clostridium lentocellum DSM 5427]
Length = 797
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 237/749 (31%), Positives = 353/749 (47%), Gaps = 102/749 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--- 82
T LE +I CI I D+ ++D A ++ M++L +K+V + +
Sbjct: 129 FTTLEREISRCI-----IAADQFADDATPELAHIRKQMKSLGVKIKEVLQNMIHSSHYQD 183
Query: 83 -IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I P++T R+ R C+ IK +K GI + SS+GAT F+EP VE N L
Sbjct: 184 MIQDPVVTLRQDRYCIPIKIEYKSQF-KGIVHDQSSTGATVFIEPMAVVELGNALKSLEV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E +L LT +IA EI + + +D FAR+ F+ D P L++Q ++
Sbjct: 243 KEQEEIEKLLIELTNQIAPITEEIGRNYELLTLLDSIFARSEFSLRYDCREPRLNNQGYI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL S+ VPID
Sbjct: 303 FLKKA------RHPLLAKESV-----------------------------------VPID 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I V + ++ITGPNTGGKT ++KT+GL SLM+ GL +PA + F+ I AD+GD
Sbjct: 322 IYVGKDFTTLLITGPNTGGKTVTLKTIGLFSLMAAIGLQIPAAEGSEMAIFEGIYADLGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ IV IL+ +S SLVL+DE+GSGTDP EG ALA +IL++LR +
Sbjct: 382 EQSIEQSLSTFSAHMTNIVSILKDMSLNSLVLLDEVGSGTDPVEGAALAMAILEHLRKQQ 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY++L ENA+ EF +E+LRPTYR+L G G SNA I+ +G
Sbjct: 442 IRTVATTHYSELKLYALSTDGVENASCEFDVESLRPTYRLLIGVPGKSNAFAISMKLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I A ++ +++ + ++ L + +R E + A + E L EI++
Sbjct: 502 EYLIDEA-----KVYLQKENVKMEDILVDLEQSKRLAEMERERAKAFRDEAEHLKEEIQN 556
Query: 502 EAKD--------LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 551
E K L+R A LKAKE L A+ + D V+++ R A A DE
Sbjct: 557 ERKKLEKAKKKVLER--AELKAKEI------LKTAEAETDKVLKEVRAVARKAQATIDE- 607
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
SL + + H+ + + + GE+V V SL K VV D
Sbjct: 608 QSLYNAKKRMSDTVSAQHKRVGKVVGRQEKVALKAVEVGEEVMVTSLMQK--GVVTAAAD 665
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ G + VRV +R IP S RL ++ + + + + SY
Sbjct: 666 ------RSGNVEVRVGIMPMR-IPLSG-------LTRLEEEIQVAKKQEKKKTKGQVSYH 711
Query: 672 -PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
+ T +D+RGM V+EA +D L A + +IHG GTG ++ + + L+
Sbjct: 712 MNKTSTISTQVDVRGMMVDEAWPVVDKYLDDAYLSGLKQVTIIHGKGTGALRSGITQKLK 771
Query: 729 NHPRVAKYEQESPMNY-----GCTVAYIK 752
HP V + + P Y G TV IK
Sbjct: 772 RHPHV---QDQRPGLYGEGEMGVTVVTIK 797
>gi|397906326|ref|ZP_10507138.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
gi|397160629|emb|CCJ34475.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
Length = 788
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 227/739 (30%), Positives = 371/739 (50%), Gaps = 98/739 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA----ERKRNMENLDS 68
Y + E++++ ++ LEE I I + I DRASE L IR + +R E L S
Sbjct: 115 YPIINEIIESLFYIKSLEEDIERAIVSEEEID-DRASEKLYSIRRAIKDKNQRVKEKLQS 173
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+L ++ + +P+IT R R + +K+ K + G+ + S+SG+T F+EP
Sbjct: 174 MLHSLSKYL------QEPIITMRNGRYVIPVKSEFKGSVA-GLVHDQSASGSTLFIEPMP 226
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE NN L E E IL L+ ++AK+ E+ + + + +D A+A F +
Sbjct: 227 IVELNNEIRELELKEKVEIERILKELSEKVAKNSEELLHDNENIAYLDFLMAKAKFGLDL 286
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
D P V+ IN++ +HPL+ D E
Sbjct: 287 DASIP------EVNDKGIINMKRARHPLI--------------------DKEKV------ 314
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPIDI++ +VITGPNTGGKT ++KT GL +LM+ AGL +P +
Sbjct: 315 ---------VPIDIRLGQNYNALVITGPNTGGKTVTLKTTGLLTLMAMAGLAIPCSDGST 365
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
+ F+ + ADIGD QS+EQ+LSTFS H+ I++I++ +SL+L+DE+G+GTDPSEG A
Sbjct: 366 VSVFNKVFADIGDEQSIEQSLSTFSSHMKNIINIVKEADEKSLILVDELGAGTDPSEGAA 425
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA S+L+Y + V TTHY+++ + FENA+ EF +ETLRPTYR+L G G
Sbjct: 426 LAMSLLEYFYKKGAKLVATTHYSEIKVFAMEKEGFENASVEFDVETLRPTYRLLIGIPGK 485
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I+K +G D II RA++ + + + ++ QSL + LE + +
Sbjct: 486 SNAFEISKRLGLDEGIINRAREFI-----SKDVAKFEDVIQSLQNKTLLLEREIDEVQKI 540
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLR 544
E ++L +E ++ L+ + + KE ++ Q+E + AK + D ++++ N+LR
Sbjct: 541 KRENLELKKEYSEKKYKLESQ----RDKEIKKAQEEARRIIRQAKEEADAILKEL-NELR 595
Query: 545 DASADEINSLIKESESAIAAIVEA----HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 600
A E S I+E+E A + +++ V + + + G++V+V ++
Sbjct: 596 -KRALEAES-IREAEEARKKLKNKLDAMSSKEEEVIVKDGMIEARDVKVGDEVYVSTVSA 653
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR-KQQEDRQSG 659
K TV+ +P VLVQ G M++ V P +L +++ +Q+
Sbjct: 654 K-GTVLSLPDAKGEVLVQIGVMKMSV------------------PLDKLFIEEKGKKQAQ 694
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
G++ + T S+DLRG ++EA + LD L A + + +IHG GTG
Sbjct: 695 KLGTTKIIKEKAENIST---SIDLRGQTIDEALYNLDKYLDDAFLSGLTKVTIIHGKGTG 751
Query: 718 VVKERVLEILRNHPRVAKY 736
++E + LR+H V +
Sbjct: 752 ALREGIQRALRSHSHVKSF 770
>gi|357057959|ref|ZP_09118816.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
gi|355374536|gb|EHG21830.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
Length = 784
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 219/711 (30%), Positives = 344/711 (48%), Gaps = 108/711 (15%)
Query: 46 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS +L I E + R E L ++L A Q + + ++T R R + +K
Sbjct: 144 DDASPELRRITRELQTAQARVKERLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQ 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA++
Sbjct: 200 EYRNYFP-GVIHDQSASGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSTEIAQN 258
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + E+DL FARAG A+ M P L+ QS V ++++ +HPLL
Sbjct: 259 AGILSENCTILSEMDLIFARAGLAREMQAYPPTLN-QSGV-----VHLKRARHPLL---- 308
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
P D VPIDI++ +++ITGPNTGGK
Sbjct: 309 ------------P-------------------KDKVVPIDIELGQNFSILLITGPNTGGK 337
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T SMKTLGL +L++++G +LP +P + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 338 TVSMKTLGLLALLAQSGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVR 397
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKD 400
I++ + L+L+DE+G+GTDP EG ALA SI+ + + G+AVV TTHYA L +
Sbjct: 398 IIDKAEQGDLILLDEVGAGTDPDEGAALARSIIAHFLQQ-GIAVVATTHYAVLKTYAYAE 456
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
+ ENA+ EF L+TLRPTYR+L G G SNA +I++ +G + I+ RA+ + +
Sbjct: 457 SGIENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQDIVARAEIYIS------E 510
Query: 461 QHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+H E + L E++ E++ R + AEI + + E + L L K +
Sbjct: 511 EHTHFEHVVNELEREKQDYETKNRELRNKEAEIKSVEARLRAERETLSNTRQELLHKARE 570
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI------------AAIVE 567
+ + A+ + ++ ++Q D E +I+E+ + + A+ +
Sbjct: 571 EANNIVREARRSAEETIKSLKDQFDDHGVKERRKVIQEARNRLDEAYIQDSLQKNPAVGK 630
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
RPDD S G+ V+++SL + TV+ V G + T VQ G +R VK
Sbjct: 631 TIRPDDIRS-------------GDIVYIESLAQE-GTVLSVQGKELT--VQVGGLRTIVK 674
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+A R + ++ + + + A P + D+RGM
Sbjct: 675 ------------MSACTFVTRKKPKKNTKVHVGTSIAQKTAEIRPEI-------DVRGMT 715
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
V EA L I A + S + VIHG GTG +++ + + L++H V +
Sbjct: 716 VLEAEAVLGKFIDDAVFTGLSKILVIHGKGTGALRQGLQDYLKHHRSVLSF 766
>gi|304317232|ref|YP_003852377.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778734|gb|ADL69293.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 786
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 213/699 (30%), Positives = 344/699 (49%), Gaps = 86/699 (12%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS L+ IR ++ + L + A + + P+IT R R V +K ++
Sbjct: 146 DDASPALKDIRRQKAHINNKIKDTLNSIIAS--SSKELQDPIITIRNGRYVVPVKQEYRG 203
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ + SSSGAT F+EP VE NN +L E E ILS LT +I++ EI
Sbjct: 204 MFK-GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEI 262
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
M + E+D+ FA+A ++ + P+ ++ + IN++ +HPLL
Sbjct: 263 HENMIALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL-------- 308
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
P D VPI + + +VITGPNTGGKT ++
Sbjct: 309 --------P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTL 341
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KT+GL +LM+ +GL +P + +FD I DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 342 KTVGLLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNS 401
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V+ SLVL+DE+G+GTDP+EG ALA SIL +L + TTHY++L K+ EN
Sbjct: 402 VTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVEN 461
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHR 463
A+ EF +ETLRPTYR+ G G SNA I++ +G + +II A+ + E L+ E
Sbjct: 462 ASVEFDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYITNEELKFE----- 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
++ + L ++R + E L ++ + E E + + + + K ++ ++
Sbjct: 517 --DIIKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKRRQTEAERDRIIEKAREKARK 574
Query: 524 ELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 582
L K D ++ +LR+A +D+ N LI+E+ + + ++ SE
Sbjct: 575 ILENTKSTADEIIA----KLREAEKSDKKNKLIEEARKKLKENISEM--EESLKKSEVPV 628
Query: 583 SSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
P+ G+ ++ L D+ T + P D V +Q G +++ V +N+R + +
Sbjct: 629 YKKIPKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQAGILKMNVHISNLREAESDEE 687
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
K +L K G A NE++S + T S+DLRG +EEA +++ L
Sbjct: 688 K-------KLEK-------GFATYINEKSS---NIST---SIDLRGKTLEEAEIEVEKYL 727
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + VIHG GTG+++ + +L+ + V +
Sbjct: 728 DDAYLAGLKQVTVIHGKGTGILRSGIARLLKMNKHVKSF 766
>gi|403384307|ref|ZP_10926364.1| MutS2 protein [Kurthia sp. JC30]
Length = 789
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 226/749 (30%), Positives = 353/749 (47%), Gaps = 110/749 (14%)
Query: 25 FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQA 80
LT L+ +I CID + +D AS+ L IR + + R + L SL + +A A
Sbjct: 130 ILTGLQHEINSCIDDNAKV-MDSASQTLRSIRTQLRTQEGRVRDRLASLTRGSSA----A 184
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 140
+ +IT R R + +KA ++ G+ + S+SG T ++EP V+ NN L
Sbjct: 185 KMLSDTIITIRNDRFVIPVKAEYRSHY-GGVIHDQSASGQTLYIEPDAVVQANNEIQGLK 243
Query: 141 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 200
E AE IL L+A++ + + L+ + EID+ A+A + Q P ++ + +
Sbjct: 244 VKEKAEVDRILMELSAKVQEVAHSLFVLVQILGEIDVVLAKAKYGQAHKCTMPKMNDRGY 303
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
+ + +HPLL DV D V
Sbjct: 304 MKLTKA------RHPLL--------------------DV---------------DTAVAN 322
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI+ + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + L F + ADIG
Sbjct: 323 DIEFGDDVTAIVITGPNTGGKTVTLKTIGLCTLMAQAGLPVPALDGSELAVFTQLFADIG 382
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IVDIL +SLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 383 DEQSIEQSLSTFSSHMVNIVDILNEFDHDSLVLFDELGAGTDPQEGAALAISILDEVHGR 442
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF+++TL PTYR+L G G SNA I+K +G
Sbjct: 443 GARVMATTHYPELKAYGYNRPGVVNASMEFNVDTLSPTYRLLIGVPGRSNAFEISKRLGL 502
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II+ A+ + H + SL RR+ E A +A L AE L +++
Sbjct: 503 PDNIIETAKSYT-----GTETHEVESMIASLETSRRQAEKDAEESARLLAESNALRADLD 557
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+ + + L K ++ ++ + AK + ++++ + A N +KE E
Sbjct: 558 AKIAEYEATKDELAKKAKEKARKIVAEAKQEAESIIDELHKMQHRA-----NQAVKEHE- 611
Query: 561 AIAAIVEAHR--------PDDDF--SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
I++A + P++ + N + T Q G++V V S G + T+++
Sbjct: 612 ----IIDARKRLESAAPAPENRILKKQRQLNARAQTLQVGDEVKVLSYGQR-GTLLKKDK 666
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
+ VQ G +++++ + ++ I K K+ N ++
Sbjct: 667 SGEW-HVQIGILKMKLPEEDLEYIKPEKVKDTVNV----------------------STV 703
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLE 725
R Q K LDLRG R E+A H+ D LA + S +IHG GTG ++E + +
Sbjct: 704 RNRSQAVKLELDLRGERYEDAMHRTEKYLDDALLANYHQVS---IIHGKGTGALREGIQQ 760
Query: 726 ILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+L+ HPRV Y + YG TV K
Sbjct: 761 LLKRHPRVKNYHYGNANEGGYGVTVVEFK 789
>gi|403668407|ref|ZP_10933682.1| MutS2 protein [Kurthia sp. JC8E]
Length = 789
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 219/741 (29%), Positives = 352/741 (47%), Gaps = 94/741 (12%)
Query: 25 FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQA 80
LT L+ +I CID + +D AS+ L IR + + R + L SL + AA A
Sbjct: 130 ILTGLQHEINSCIDDNAKV-MDSASQALRGIRTQLRTQEGRVRDRLASLTRGSAA----A 184
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 140
+ +IT R R + +KA ++ G+ + S+SG T ++EP V+ NN L
Sbjct: 185 KMLSDSIITLRNDRFVIPVKAEYRSHY-GGVIHDQSASGQTLYIEPDAVVQANNEIQNLK 243
Query: 141 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 200
E AE IL L++++ + + L+ + ID+ A+A + Q PI++ + +
Sbjct: 244 VKEKAEIDRILLELSSKVQEVAHSLFVLVQILAAIDVVLAKAKYGQANKCTMPIMNDRGY 303
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
+ + +HPLL D E + V
Sbjct: 304 MKLTKA------RHPLL--------------------DAETA---------------VAN 322
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI+ + +V+TGPNTGGKT S+KT+GL +LM++AGL +PA + L F + ADIG
Sbjct: 323 DIEFGDDITTIVVTGPNTGGKTVSLKTIGLCTLMAQAGLPIPALDGSELSVFTQLFADIG 382
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV+IL+ SLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 383 DEQSIEQSLSTFSSHMVNIVEILKQFDDRSLVLFDELGAGTDPQEGAALAISILDEVHGR 442
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF+++TL PTYR+L G G SNA I+K +G
Sbjct: 443 GARVMATTHYPELKAYGYNRPGVINASMEFNVDTLSPTYRLLIGVPGRSNAFEISKRLGL 502
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II+ ++ + H + SL R + E A A L E +L +++
Sbjct: 503 PEHIIEASKAFT-----GTETHEVESMIASLETSRLEAEKDAEETARLLEEANELRADLD 557
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+ + + + L+ K ++ ++ + AK + + V+ + A N +KE E
Sbjct: 558 AQMAEYEAKKETLENKAKEKARKIVEEAKREAEEVIDELHKMQHRA-----NKAVKEHEI 612
Query: 561 AIA-AIVEAHRPDDDFSV----SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
A +E P + + + N + + G++V V S G + T+++ D V
Sbjct: 613 IDARKRLEGAAPAQENRILKKQRQQNARAKQLRVGDEVKVLSYGQR-GTLIDRDKTGDWV 671
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
VQ G +++++ +++++ I K K+ + ++ R Q
Sbjct: 672 -VQIGILKMKLPEDDLQYIKPEKTKDTVSV----------------------STVRNRSQ 708
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
K LDLRG R E+A H+ + L A + + +IHG GTG ++E + ++L+ HPRV
Sbjct: 709 AVKLELDLRGERYEDAMHRTEKYLDDALLSNYHQVSIIHGKGTGALREGIQQLLKRHPRV 768
Query: 734 AKYE--QESPMNYGCTVAYIK 752
Y S YG T+ K
Sbjct: 769 KGYHFGSASEGGYGVTIVEFK 789
>gi|323142314|ref|ZP_08077146.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322413198|gb|EFY04085.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 793
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 225/726 (30%), Positives = 349/726 (48%), Gaps = 88/726 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
+ LE++IG ID + I D AS L +RA + R E LDS+L Q +
Sbjct: 126 FSRLEKQIGSAID-EYGEIKDNASPKLGGLRAAIQIAKNRVKEKLDSILHDPNNQKYFMD 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K +K P GI + S +GAT F+EP V NN R
Sbjct: 185 NI----VTMRGDRYVIPVKQEYKMNFP-GIVHDQSGTGATLFIEPLAVVNLNNDIKRYVA 239
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL LT + + + ++ +D+ ARA AQ V P+L
Sbjct: 240 EEHEEMERILRQLTQNVGAEAKALLASLEIFTTLDVICARALLAQEQHAVRPMLV----- 294
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ I +HPLL P D VP++
Sbjct: 295 -LSGGVEIAQGRHPLL----------------P-------------------KDTVVPLN 318
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+++ + +++ITGPNTGGKT ++K +GL +LM++ GL++PA + ++P F + ADIGD
Sbjct: 319 VQLGDKFTMLLITGPNTGGKTVALKAVGLFALMAQIGLFIPASS-AKMPVFRAVYADIGD 377
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ ++ IL V LVLIDEI +GTDP+EG ALA ++L++L ++
Sbjct: 378 EQSIEQSLSTFSAHMTNLIRILNEVKAGDLVLIDEICAGTDPNEGAALAMAMLEHLHEQG 437
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
L +VTTHY++L ENA+ EF +LRPTYR+L G G SNA NI++ +G
Sbjct: 438 VLTMVTTHYSELKTFAYGHEGMENASVEFDPVSLRPTYRLLMGVPGSSNAFNISRRLGLA 497
Query: 442 RKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II+ A +L+ Q+H E + Q L ERR+ ES ++ L E L +
Sbjct: 498 EDIIKNAGELL------NQEHVHMENVLQELDSERRRYESGSKEIEDLRRESEQLRNALA 551
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ-------DFENQLRDASADEINS 553
+ +RR + K +Q + ++ + + V++ DF+ + + +A+E
Sbjct: 552 YSKSEFERRKNEMLRKAREQADEIYRRSRRESEAVLKELRSMKADFDTKRLEQAAEEARK 611
Query: 554 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
+ ++ S A + E S+ T + G V V SLG K + +V G+D
Sbjct: 612 KLNKTLSEDAPLPEG-----------APLSAKTAKKGLNVFVVSLG-KNGIITDVNGNDV 659
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
TV V KM V KK + + + AP+ RK S +A ++ + +
Sbjct: 660 TVQVGILKMTVPAKKC----LLTKAQPAHTDAAPKKRKG----FSKNAAANYAHQMFIAK 711
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
++K +DLRGM ++EA +D A+ A L +IHG GTG ++ + L +
Sbjct: 712 SGSAKQEIDLRGMTLDEAIPVVDKAIDDALIAGIGQLRLIHGKGTGALRAGLTAYLSTNR 771
Query: 732 RVAKYE 737
V K E
Sbjct: 772 FVKKLE 777
>gi|335038522|ref|ZP_08531758.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
gi|334181583|gb|EGL84112.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
Length = 787
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 225/756 (29%), Positives = 369/756 (48%), Gaps = 111/756 (14%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 60
LE+ C S L L + L ++E+ I CID + +LD AS L+ IR +
Sbjct: 105 FLEKVCAE-HGELSILARLEEQIRPLRDVEQSIKSCID-EHGDVLDSASPALKEIRNRIR 162
Query: 61 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 120
+ + L+++ + +P+IT R+ R C+ +KA +++ G+ + S+SGA
Sbjct: 163 HAEQRVKRQLEQIVRAPANQKMLQEPIITIRQDRYCIPVKAEYRHHF-GGLVHDQSASGA 221
Query: 121 TYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDL 177
T F+EP+ V NN L +++ EE I L+ LT ++ ++ ++K + + E+D
Sbjct: 222 TLFVEPEAVVAINN---ELREAKLQEEKEIDRILTGLTRQVGEAGEDLKNNVQALAELDF 278
Query: 178 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 237
FA+A +A+ + V P L+ Q + + +HPL+ +
Sbjct: 279 LFAKAYYARSIRAVQPQLNDQGYFKLIRA------RHPLIPAQDV--------------- 317
Query: 238 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 297
VP ++ E +VITGPNTGGKT ++KTLGL +LM+ +
Sbjct: 318 --------------------VPTTFELGGEYTCMVITGPNTGGKTVTLKTLGLLTLMACS 357
Query: 298 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 357
GL++PA+ + + ADIGD QS+EQ+LSTFS H++ IVDILE + SL+L DE+
Sbjct: 358 GLFIPAEEGSHVAVVSGVYADIGDEQSIEQSLSTFSSHMTHIVDILEKMDENSLLLFDEL 417
Query: 358 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 417
G+GTDP+EG ALA +IL ++ R L V TTHY++L NA+ EF ETL+P
Sbjct: 418 GAGTDPTEGAALAMAILDFVHSRGALVVATTHYSELKAYAYSRPGVINASVEFDTETLKP 477
Query: 418 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEER 475
TYR+L G G SNA +IA+ +G +II+ A+ + + LR + H +EL + R
Sbjct: 478 TYRLLVGVPGRSNAFHIARRLGLKEEIIETAKNQISTDDLRID---HMLAELESA----R 530
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
++ E + A L E+ L + + + L++ L ++ QQ +Q++ + + +
Sbjct: 531 KQAEEDRQAAERLKREVEALKQSLAKKEAQLEKEKERLISQAKQQAEQKIERMMKEAERI 590
Query: 536 VQDFENQLRDASADEINSLI---------KESESAIAAIVEAHRPDDDFSVSETNTSSFT 586
+ R A + + LI KE+ S A ++ RP N +F
Sbjct: 591 MAQLREWQRGHQAVKEHQLIEAKKGLKQLKEAASQQPAGMDKPRP------KRQNGQTFK 644
Query: 587 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 646
P G+ V+V + G K V+E + + VQ G ++++VK +++ I
Sbjct: 645 P--GDDVYVHTFGQK-GQVIEKLSEQE-YYVQLGIIKMKVKASDMEKI------------ 688
Query: 647 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS----LDLRGMRVEEASHQLDIAL--A 700
K ++ Q+G A RVQT + LD+RG +EA +D L A
Sbjct: 689 ----KTKQTEQAGMA-----------RVQTKTETVGLELDVRGQTTDEAIAAVDKYLDDA 733
Query: 701 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +IHG GTG +++ + + LR H RV +
Sbjct: 734 LLAGYQQVSIIHGKGTGQLRKGIQDFLRRHKRVKAF 769
>gi|297583686|ref|YP_003699466.1| MutS2 family protein [Bacillus selenitireducens MLS10]
gi|297142143|gb|ADH98900.1| MutS2 family protein [Bacillus selenitireducens MLS10]
Length = 786
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 232/761 (30%), Positives = 359/761 (47%), Gaps = 117/761 (15%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L E+ ++ LT+LE +I ID + LD AS L IR + R++E+ S+ K+
Sbjct: 119 LPEMTRSMTPLTDLEHEIKQAIDENGHV-LDSASPALRQIR-QSIRSLES--SVRSKLEN 174
Query: 76 QIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ G + ++T R R + +KA ++ GI + S+SG T F+EP+ AV
Sbjct: 175 TTRSSSGRKMLSDAIVTIRNDRYVIPVKAEYRNHF-GGIVHDQSASGQTLFVEPEFAVTT 233
Query: 133 NNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
NN +L ++ EET I L L+ +++ E+ ++D + E+D FA+A + +
Sbjct: 234 NN---QLREAKAKEETEIQRILFELSGSVSEVTGELAVILDVMTEVDFMFAKAYYGASIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P L + D S ++ +HPL+ P
Sbjct: 291 ATEPKLDT------DGSFDLRKARHPLI----------------P--------------- 313
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
D VPID+ + +VITGPNTGGKT ++KT+G+ +LM+++GL +P +
Sbjct: 314 ----EDEIVPIDVSLGDAYSSLVITGPNTGGKTVTLKTVGMLTLMAQSGLQIPVQEGSTA 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+ I ADIGD QS+EQ+LSTFS H++ IV+I++ V ESLVL DE+G+GTDP+EG AL
Sbjct: 370 GIYQKIFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVDHESLVLFDELGAGTDPTEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL +R + TTHY++L NA+ EF +ETLRPTYR+L G G S
Sbjct: 430 AIAILDRVRSIGAKVIATTHYSELKGYAYNREGVINASVEFDVETLRPTYRLLIGIPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA------- 482
NA I+K +G II+ A L ++ ++ SL + R+ E
Sbjct: 490 NAFAISKRLGLGDDIIEEAG-----LHVTADSNKMEKMISSLEDSRKAAEKDYDEADALL 544
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
+ A +LHAE+ + IE E + + RA K ++ +E F ++ +Q
Sbjct: 545 QEAEALHAELAEELERIEVEKERIFERAEEKANKAVEKAMEEAEFIIAELRE-MQANAPS 603
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
++D + +++SE + + V + P G++V V SL K
Sbjct: 604 IKDHKLIDAKKRLEDSEVTLKKKKKTSPVKKKKPV-----DTLLP--GDEVKVVSLNQK- 655
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQEDRQS 658
+VE G D +VQ G M+++VKK+++ RP P + P LR
Sbjct: 656 GHIVEASGKTD-YMVQLGMMKMKVKKDDLLYIDRPKPVETK-----PLATLRG------- 702
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHG 713
R K LDLRG R E A + D LA + S +IHG
Sbjct: 703 --------------RDAHVKPELDLRGERYESAMMDVEKYLDDAVLAGYHQVS---IIHG 745
Query: 714 MGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 752
GTG +++ V E+L HP V + + G TVA +K
Sbjct: 746 KGTGALRKGVQELLERHPNVKSTRLGSQGEGGSGVTVAQLK 786
>gi|381211900|ref|ZP_09918971.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
Length = 780
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 228/732 (31%), Positives = 357/732 (48%), Gaps = 101/732 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE I CID + ++D AS L IR+ R + LDS K Q+
Sbjct: 126 LRKLETDINSCIDDRG-NVMDSASVKLRSIRSSIRTYESRVRDKLDSYTKS------QSK 178
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ + GI + S+SGAT FMEPK V+ NN
Sbjct: 179 MLSDAIITIRNDRYVLPVKQEYRGAI-GGIVHDQSASGATLFMEPKAVVDLNNQLQEAKV 237
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
+E E IL L+ +IA E + + + +ID ARA + M P ++
Sbjct: 238 NEKKEIERILRELSGKIADDEAILTENVTVLAKIDFITARAKLGRGMKAAMPAIND---- 293
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ IN++ +HPL+ P D V D
Sbjct: 294 --NGIINVKQARHPLI----------------P-------------------DDEVVSND 316
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
+ + + +VITGPNTGGKT ++K +GL +LM+++GL +PA + + FD + ADIGD
Sbjct: 317 VVLGKDYTSIVITGPNTGGKTVTLKMIGLFTLMAQSGLQIPAADGCEMAVFDDVFADIGD 376
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ IV IL + +SLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 377 EQSIEQNLSTFSSHMINIVSILSGIDDKSLVLFDELGAGTDPQEGAALAMSILDDVVSRG 436
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF +ETL+PTYR+L G G SNA IA +G
Sbjct: 437 ARVVATTHYPELKAYGFNRDNVINASVEFDVETLQPTYRLLIGVPGRSNAFEIAGRLGLA 496
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+ II RA+ V + E ++ + L QS RR+ E+ A + E +L ++
Sbjct: 497 QSIIDRAKNQV-GVNSESVENMIASLEQS----RRQAEADYEEAHEILQESEELRNDLIK 551
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QLRDASADEINSLIK 556
+ + + L K ++ + L A+ + +T+V + + QL++ E +++
Sbjct: 552 AWQQYENKREDLYKKAEEKADKALQKARDEAETIVDEIRHMKTDAQLKEHEWIEARKMLE 611
Query: 557 ESESAIAAIVEAHRPDDDFSVSETNTSS-FTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
E++ +++ +A++P + NT+ F P G+++ + S ++ T++E +++
Sbjct: 612 EAQPKLSS-KKANKPK-----QQPNTAKEFKP--GDEIKLLS-ANQQGTILEKLNENE-Y 661
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
L+Q G M+V+VK++ I+ I K K++ P + GSS
Sbjct: 662 LIQVGIMKVQVKRSEIQLI---KHKSSVTEKPL---------ATVKGSSFH--------- 700
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
K LDLRG R E+A L+ I A +F+IHG GTG +++ V E + H R+
Sbjct: 701 -VKTELDLRGERFEDAMGDLEKYIDDALLAGYPKVFIIHGKGTGALRKGVKEFAKKHTRI 759
Query: 734 AKYEQESPMNYG 745
A E P + G
Sbjct: 760 A---SERPGSTG 768
>gi|294793864|ref|ZP_06759001.1| MutS2 protein [Veillonella sp. 3_1_44]
gi|294455434|gb|EFG23806.1| MutS2 protein [Veillonella sp. 3_1_44]
Length = 792
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 199/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLQKDIVERATE----YKSQFG 511
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R E + ++E E K + + AK
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNENRKQILAKAQAD 571
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ + Q + + D + S I + I+++ H P+
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
+ ++ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 688 AREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 734
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|260887326|ref|ZP_05898589.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|330838921|ref|YP_004413501.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
gi|260862962|gb|EEX77462.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|329746685|gb|AEC00042.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
Length = 791
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 217/739 (29%), Positives = 359/739 (48%), Gaps = 95/739 (12%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM----ENLDSL 69
PL+ E K L +LE ++ +D + +LD AS +L IR E + E ++++
Sbjct: 113 PLIKEQAKGIEILGQLERRLENSVD-EHGNLLDDASVELSRIRRELRSGRRRAKEQMEAI 171
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L + Q F +IT+R R + IK ++ P GI + S+SGAT F+EP
Sbjct: 172 LHRTEYQKF----FQDAIITQRAERNVIPIKQEYRQSFP-GIVHDQSASGATLFIEPMAL 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN +L+ +E E IL LL+ E+ K+ ++ + +D FARA A M
Sbjct: 227 VDLNNDLKQLALAEKTEVQRILRLLSQEVGKNGSVLEGNCAILASLDFIFARAKLAADMQ 286
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ + ++ +HPL+ + +
Sbjct: 287 AKRPAINREGRTKLVAA------RHPLIDAAKV--------------------------- 313
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPIDI + R+++ITGPNTGGKT S+KT+GL +LM ++G Y+PA +
Sbjct: 314 --------VPIDIALGEAYRMLLITGPNTGGKTVSLKTIGLFALMVQSGCYIPAAAGSEI 365
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
+ + IGD QS+EQ+LSTFS H+S +V +LE V L+L+DEIG+GTDP EG AL
Sbjct: 366 SVYTNVYTVIGDEQSIEQSLSTFSAHMSHLVKLLECVEGTDLLLLDEIGAGTDPEEGAAL 425
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL+ R +VTTHY++L ENA EF +ETLRPTYR+L G G S
Sbjct: 426 AMAILEQFLARGSSTIVTTHYSELKTFAFTREGIENACVEFDVETLRPTYRLLTGMPGAS 485
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK---LESQARTAA 486
NA I++ +G I RAQ+ ++ + ++ + LM E+R +E Q R A
Sbjct: 486 NAFAISRRLGLSEAAILRAQQFIKADHAQFEKVVNQLESEKLMYEQRNADIMERQQRV-A 544
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L + L EI ++ + + ++A A ++ ++E + +++ + Q D
Sbjct: 545 KLEEKTQALKDEIREKKEQMLKKARQESANLVRRTRRE-------AEEIIKSLKAQFDDL 597
Query: 547 SADEINSLIKESESAIAAIVEAHR----PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
+ ++E+ + E R P + + + G+ V+V+ L D+
Sbjct: 598 GIESRRRAMQEAREKLQEAAERSRTGLLPGKAYK-EKIDMQKLA--VGDVVYVRKL-DQK 653
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
ATV+++ G + + VQ G ++ VK + R + ++++ PA + GS G
Sbjct: 654 ATVLKIQGAN--IEVQLGSLKTYVKAGDCRFVERARKE---QPAAK----------GSGG 698
Query: 663 SSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
+ G +Q + N +D+RG+ V+EA L L A + +IHG GTG
Sbjct: 699 TKG----AGALLQKTANLHREIDVRGLMVDEAEQVLGKFLDDAVIGGLGQVLIIHGKGTG 754
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ + + L++H VA++
Sbjct: 755 ALRKGIHDYLKHHKSVARF 773
>gi|317498567|ref|ZP_07956860.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894054|gb|EFV16243.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 800
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 212/715 (29%), Positives = 342/715 (47%), Gaps = 98/715 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR K+ + + + L + + + ++T R R C+ +K +
Sbjct: 145 ISDDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRYCIPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ G+ + S+SG T F+EP V NN L E +E ILS+L+ + +
Sbjct: 205 RSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILSEQASYGVD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + ++ +D FA+A +A+ +D PI D INI+ HPLL +
Sbjct: 264 DLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHPLLDRKKV- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI++ + + ++++TGPNTGGKT
Sbjct: 317 ----------------------------------VPINVSLGKDFSMLIVTGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H++ IV I+
Sbjct: 343 SLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSHMTNIVSIV 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 403 QQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKMFALSTNDI 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++ +
Sbjct: 463 ENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDESVKD----- 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++++ + LE +T EI++ +EIE + L R ++K K + ++
Sbjct: 518 ----FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKEKRDKMLRD 570
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD---------- 573
A+ + ++ + + ++ D++ E N L K++++ A H D
Sbjct: 571 ----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDANKKMEHMRSDLRGRMTKLEG 625
Query: 574 -------DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
+ + F G++V+V SL TV +P + VQ G MR V
Sbjct: 626 QMAYKSKKKNKKRHEANDF--HVGDEVYVTSLS-LAGTVSTLPNAKGDLYVQMGMMRSLV 682
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
NI+ + +K A R ++ E R G + N+ AS P + ++ GM
Sbjct: 683 ---NIKDLEITK---TAKDVKRENQRNESRNRGRT-AINKSASIRPEI-------NVMGM 728
Query: 687 RVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 736
V+EA QLD I AC + + + V+HG GTG +++ + + L+ R++ Y
Sbjct: 729 TVDEAIAQLDKYIDDACLANLAQITVVHGKGTGALRKGLHNYFKQLKKQKRISGY 783
>gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
Length = 781
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 208/711 (29%), Positives = 338/711 (47%), Gaps = 80/711 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR +R E + + L + +++ R R V IK +
Sbjct: 141 IADNASRELLAIRRSLRRKEEEIKNKLNSYVTSSKYEDALQDKVVSVRDGRYVVPIKTNK 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ ++ +GI + S+SG T F+EP VE NN L E AE IL L+ K +
Sbjct: 201 RSVI-NGIVHDKSASGNTLFIEPSAIVELNNQYKDLELKEDAEIRRILDRLSRLAQKFDV 259
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI + ID A+A F D P L+ Q ++ S+I HPLL G
Sbjct: 260 EILENQKIIARIDFLQAKAKFGLENDYSLPKLNQQKIINIKSAI------HPLLPGK--- 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPID+ + + ++ITGPNTGGKT
Sbjct: 311 ---------------------------------VVPIDVAIGGDYTTLIITGPNTGGKTV 337
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM++ L++PA + FD + DIGD QS+E +LSTFS ++ IVDIL
Sbjct: 338 SLKTVGLITLMAQTALFIPADEGSTVNVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDIL 397
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
V+ SLVL+DEIGSGTDP EG ALA SIL +L ++ + TTHY++L ++ R
Sbjct: 398 NRVTSNSLVLLDEIGSGTDPIEGAALAISILSHLTEKEVMTFATTHYSELKYYAMENNRV 457
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF++ TL PTY++ G+ G SNA I+K +G +I+++A+ L+
Sbjct: 458 MNASVEFNVNTLSPTYKLEIGTPGKSNAFEISKRLGLSEEILKKAKDLI-----SDDTKN 512
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++ + + +++ ++E++ + + EI + ++ +++K++D A + K ++ +
Sbjct: 513 FNKILEQIEDDKYQMEAKNKEIEAYRREIQSIKDKLRNKSKEIDEAKAEIIKKAEERANE 572
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
L+ A + ++++ + + D SL K + +E R +D F + +
Sbjct: 573 ILDKANKESQAMLKEAKRSKNANTRDIDRSLNKIRNKFKDSYIE--REEDRFGQTRAKDA 630
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKN 641
+ G+ + V L +K A V+E P + VQ G +++ N++ I N KN
Sbjct: 631 PDELKVGDMIIVAGLNEK-AEVIEGPDSKGNIKVQMGILKMDSNIKNVKKIEGVNQTEKN 689
Query: 642 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 699
++K +++ + + SLDLRG R +EA LD L
Sbjct: 690 -------IKKVYSVKKAMNISA----------------SLDLRGQRYDEAMRNLDKYLDD 726
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTV 748
A +IHG GTG + + V E L+ RV Y + YG T+
Sbjct: 727 AMLAGLDQAKIIHGKGTGALIKGVSENLKTDKRVKSYRFGDDEEGGYGVTI 777
>gi|363890216|ref|ZP_09317557.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
gi|361965897|gb|EHL18859.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
Length = 785
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 349/729 (47%), Gaps = 105/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 452
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 453 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSNQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 743
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGEGG 776
Query: 744 YGCTVAYIK 752
G TVA +K
Sbjct: 777 MGVTVAILK 785
>gi|366053748|ref|ZP_09451470.1| MutS2 family protein [Lactobacillus suebicus KCTC 3549]
Length = 790
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 216/691 (31%), Positives = 343/691 (49%), Gaps = 114/691 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI-- 144
++T R R + ++A+++ G+ + S SG T F+EP+ +E NN RL ++I
Sbjct: 188 IVTMRNDRYVLPVQANYRNHF-GGVVHDQSQSGLTLFIEPQAVMELNN---RLREAQIDE 243
Query: 145 -AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
EE IL+ L++ +A EI + + +D A+A A M+ PI+S Q+HV
Sbjct: 244 RHEERRILAELSSTLAPYRIEIAHNETILGHLDFLNAKAAIAHEMNATKPIVSEQNHV-- 301
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
N++ +HPL+ +P K V DI+
Sbjct: 302 ----NLKRARHPLI---------------DPKKM--------------------VANDIE 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + ++ITGPNTGGKT ++KT+GL LM ++GLY+P + + F I ADIGD Q
Sbjct: 323 IGDAYKAIIITGPNTGGKTITLKTIGLIQLMGQSGLYIPTEEESSIGVFGDIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
SLEQNLSTFSGH+ + IL+ + SLVL+DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SLEQNLSTFSGHMENVKSILDHIDSRSLVLLDELGAGTDPKEGAALAMSILDAIGVKNSY 442
Query: 384 AVVTTHYADLSCLK-DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+VTTHY +L D+D NA+ EF ETL+PTYR+L G G SNA IA+ +G
Sbjct: 443 VMVTTHYPELKVYGYDRDQTI-NASMEFDQETLQPTYRLLLGIPGRSNAFEIAQRLGISS 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK-------LESQARTAASLHAEI--- 492
+II A+ L + + Q K + L+E+R+K LE Q A L E+
Sbjct: 502 EIISEARSLTD---DDSQDLNK--MIGDLVEQRKKAHEHELELEHQVADATDLQTELRQK 556
Query: 493 MDLYREIEDEAKDLDR-RAAHLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASADE 550
+D + D+ +D R +A H A+ Q+ Q + + +++ ENQL DA +
Sbjct: 557 LDQFEANRDQMQDQARVQANHEVAQARQKADQIISHLRQLERQQGANVKENQLIDAKG-Q 615
Query: 551 INSL-IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+N+L + + + +++ + D V G+ V VKS G + +
Sbjct: 616 LNALHMNDPKLKKNKVLQREKRKHDLKV------------GDAVLVKSYG-QYGELTRKM 662
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN-----AANPAPRLRKQQEDRQSGSAGSS 664
G DD VQ G ++++V ++++ + RKN A P + + Q+ RQ+ +
Sbjct: 663 GKDDWE-VQLGILKMKVNESDLE---RTDRKNISEQEAKQPKRPMVRTQQTRQTSA---- 714
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
LDLRG R E A ++++ I A + + +IHG GTG +++
Sbjct: 715 ---------------RLDLRGHRYEAAMNEVEQFIDHAILNNLPSVTIIHGKGTGALRKG 759
Query: 723 VLEILRNHPRVAKYEQESPM--NYGCTVAYI 751
E L+++PRV +E +P G T+ ++
Sbjct: 760 THEYLQSNPRVKSFEYAAPNAGGDGATIVFL 790
>gi|167044223|gb|ABZ08904.1| putative Smr domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 827
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 221/757 (29%), Positives = 369/757 (48%), Gaps = 86/757 (11%)
Query: 11 HRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 69
H PLL + +N L +LE I I +LD AS L +R E + L+ +
Sbjct: 142 HEEIPLLTSISENIPELGDLERAISGAI-SPAGEVLDNASPVLHNLRREARNAQNRLNEI 200
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+++ ++ +A + +PLIT+R RM + IKA +Y +P GI +VS SGAT F+EP A
Sbjct: 201 MERNLRRLQRAELVQEPLITQRNGRMVLLIKAEMRYRVP-GIVHDVSDSGATVFVEPMPA 259
Query: 130 VEFNNMEVRLSNSEIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
++ N R + +AEE IL L+ + S ++ +D + +DL A+A +
Sbjct: 260 IDMGN---RWREARLAEEREVERILRQLSGMVGLSGEDLLLTLDLIARLDLDMAKARHSA 316
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
++ V P +S Q D + + +HPLL G+
Sbjct: 317 AINAVPPWVSDQE--VADRHLKLVRARHPLLTGTV------------------------- 349
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP+ + ++ + V++ITGPN GGKT ++KT+GL ++M++AGL++PA+
Sbjct: 350 -----------VPVSVDLDRDQGVLLITGPNAGGKTVTLKTVGLLAMMAQAGLHVPAEE- 397
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
P FD + ADIGD QS++Q++STFS HIS + I+ + SLVL+DE+G+ TDP EG
Sbjct: 398 AHFPRFDGVYADIGDQQSIQQSMSTFSSHISNLKGIMSRATVHSLVLVDELGTSTDPEEG 457
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA+++L+Y + V TTH+ ++ NA+ + TL PTY + G
Sbjct: 458 SALASAVLRYFQKIGSFVVGTTHHRGVARFVQDQPGMVNASVDLDPTTLEPTYHLTLGLP 517
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G S AL IA +G +++I A+ + + + EL Q L +ERR +E A
Sbjct: 518 GRSYALTIAARLGVPQEVIDDARSGISPV-----EQATEELLQELQQERRVVEELREEAE 572
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE----NQ 542
+ +E + RE++ + D++ A+L + Q++Q+ ++ ++ + E Q
Sbjct: 573 TARSEAVRRQRELDVQLADVEAAKANLVEESRQELQRRISGILDRLSKAERSLEAYELRQ 632
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF----GEQVHVKSL 598
+A A I+E +++ A + E R + + S Q G++V+++ +
Sbjct: 633 DAEARARAETESIQEIQASRAEVREVQRQLESAAWSPIEVERVPWQQILKEGDRVYIRGI 692
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
+ V+ D V V G MR ++ P+ +R+ +PA
Sbjct: 693 AQPV-EVISAADSQDRVEVLLGTMRAKI------PVYQLERQAEGHPA------------ 733
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
A + PR + S LDLRG+RV+EA ++D AL A + + + +IHG GT
Sbjct: 734 --AAKQGVYLNRAPR-KPSNADLDLRGLRVDEALSRVDEALNDAALDGAASVRIIHGKGT 790
Query: 717 GVVKERVLEILRNHPRVAKYEQ-ESPMNYGCTVAYIK 752
G +++ + E L HP V + E P G TVA ++
Sbjct: 791 GALRQAIREYLGGHPLVISAQNGEGPGGDGITVAELE 827
>gi|169334053|ref|ZP_02861246.1| hypothetical protein ANASTE_00446 [Anaerofustis stercorihominis DSM
17244]
gi|169258770|gb|EDS72736.1| recombination and DNA strand exchange inhibitor protein
[Anaerofustis stercorihominis DSM 17244]
Length = 796
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 227/750 (30%), Positives = 378/750 (50%), Gaps = 113/750 (15%)
Query: 13 YSPLLELLKNCNFLTELEEKIG-FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+ LL+ N L+ L+++I ID + I D+AS L IR RN++N ++ ++
Sbjct: 116 FDILLDYADNIEDLSFLQKEIDRVIIDSEA--ISDKASSTLYDIR----RNIKNTNNKIR 169
Query: 72 KVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ I + K L +T R SR V +K+ ++ + GI + S SGAT F+EP+
Sbjct: 170 EKLNSIINSKTYQKYLSENIVTIRYSRYVVPVKSEYRGEVK-GIVHDTSQSGATLFIEPE 228
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN L E E IL +L+ +I ++ + + +L +D+ A++ F+
Sbjct: 229 AIVNLNNKLKELEVEEQKEIEVILRILSNKIKENASNLNVNENILLYLDVLNAKSRFSIK 288
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
D P +SS D I ++ +HPL+ EM
Sbjct: 289 NDYHKPKISS------DEEIVLKSARHPLI-------------------------EMNKA 317
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VP +I ++ + R ++ITGPNTGGKT ++KT+GL SL+ ++GL++PA +
Sbjct: 318 ----------VPSNIILDKDHRALIITGPNTGGKTVTLKTVGLCSLLFQSGLFIPANDGS 367
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
RLP ++ I ADIGD+QS+ Q+LSTFSGH++ IVDI+ + ++LVL+DE+ GTDP+EG
Sbjct: 368 RLPIYEKIFADIGDNQSIAQSLSTFSGHMTNIVDIVNSANDKTLVLLDELCVGTDPTEGS 427
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
++A SI+ L++ TTHY+++ NA+ EF +ETL PTYR++ G G
Sbjct: 428 SIAISIIDNLKNIGARIFSTTHYSEIKEYAIVKKNVMNASVEFDVETLSPTYRLILGIPG 487
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAA 486
SNA I+K +G II+ A+K + + +R+ E L + L E+ K+E +
Sbjct: 488 KSNAFEISKKLGLKDSIIRDAKKYL------TEDNREVEDLIKELNEKAVKVEEEKTQID 541
Query: 487 SLHAEIMDLYREIEDEAKDLDRRA------AHLKAK--------ETQQVQQELNFAKVQI 532
L E +L +E E ++ A LKAK +++++ LN K+ I
Sbjct: 542 RLLRENKELNERLESEKAYIEENKSKIMMEASLKAKDIIAAAKRDSKELINRLN--KINI 599
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--G 590
V + ++ A+ I IKE E + + + +H E N + F G
Sbjct: 600 PKNVNANNTKFKE-EAENIKKQIKEKEELLNSYIPSHELK-----KEGNNKNRKEDFKVG 653
Query: 591 EQVHVKSLGDKLATVVEVPGDDD--TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
E+V++KSL D+ A+++ G D+ V +Q G ++ ++ PI + N
Sbjct: 654 EEVYIKSL-DQYASIL---GFDNKSNVFIQAGIIKTKI------PISKIEHSN------- 696
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 706
K++E + + SN +A +T S+D+RGM ++A +++ L A +
Sbjct: 697 --KEKEHIKKTAVKFSNTKA------KTIDTSIDIRGMYSDDAILKVEKYLDDAYLANLK 748
Query: 707 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ +IHG GTGV+K V ++L++H V KY
Sbjct: 749 MVTIIHGKGTGVLKNAVQDLLKHHSYVKKY 778
>gi|372324775|ref|ZP_09519364.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
gi|366983583|gb|EHN58982.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
Length = 795
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 228/746 (30%), Positives = 364/746 (48%), Gaps = 100/746 (13%)
Query: 10 FHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 69
F +L L+ ++L +++ ID + + LD AS+ L IR + N+ L
Sbjct: 115 FDNLQQILFLVNRLTDFSQLSQRLDQTIDDQGKM-LDTASKKLAHIRKNTQLTETNIREL 173
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L K+ A + + +IT R + + +KA +K G+ + S SG T ++EP+ A
Sbjct: 174 LLKMTKG-NDAKYLSENVITTRDGVLVLPVKAENKKHFG-GVVHDQSQSGLTLYIEPEAA 231
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V N+ L E E AIL ++ + ++K + + E+DL A+A A MD
Sbjct: 232 VSLNDHLHDLEIDERREINAILIDISQSLFPLYEQLKLNNELIGELDLIQAKARLANTMD 291
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
+ P ++S+ I+++ +HPLL SD
Sbjct: 292 AIKPQINSEKE------IDLQAARHPLL------------------PSDA---------- 317
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
V DIK+ + ++ITGPNTGGKT MKTLGL LM+++G+++ A + +
Sbjct: 318 --------VANDIKLGHDFISLIITGPNTGGKTVLMKTLGLLQLMAQSGIFITADKNSSI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
FD I ADIGD QSLEQ+LSTFS H+ I +I+ +SLVL+DE+G+GTDPSEG AL
Sbjct: 370 YVFDNIFADIGDEQSLEQSLSTFSSHMMNIKEIIADSDTDSLVLLDELGAGTDPSEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +I++ L +R L + TTHY +L D+ NA+ EF L+TLRPTYR+L G G S
Sbjct: 430 AMAIVENLSERKILNLTTTHYPELKVFADQKPFAVNASMEFDLKTLRPTYRLLIGIPGQS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA+ IA+ +G D+++++RA+ V+ P+ Q+ + L Q L+ +R+ L+ Q
Sbjct: 490 NAITIARRLGVDKRVLERAEAYVD---PKDQE--LNNLIQGLVFQRQDLDQQQE------ 538
Query: 490 AEIMDLYREIED---EAKDLDRRAAHL---KAKETQQVQQELNFAKVQIDTVVQDFENQL 543
DL R + D E ++LDR+++ L KAK + E N + + +Q+
Sbjct: 539 ----DLQRRLADVNSEKENLDRQSSELEQSKAKLLLDAKNEANHIVASTRSESKKLLDQI 594
Query: 544 RDA--SADEINSLIKESESAIAAIVEAHRPDDDFSVSET-NTSSFTPQF--GEQVHVKSL 598
R A + + ++ + I + R +D ++ + QF GE V V S
Sbjct: 595 RSERLKAGQGSGKNEQELNRIVNQFDKLRQNDSLEKNKVLQKAKRAKQFRIGEDVMVTSY 654
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
+V + +Q G +++ V +N++ +P S+ + A P
Sbjct: 655 HQPGRITDKVSNHE--WQIQMGILKMTVHENDLEKLPESQVEKIAKSKP----------- 701
Query: 659 GSAGSSNEEASYGPRV--QTSKN---SLDLRGMRVEEASHQLD--IALACWESRSVLFVI 711
A + RV S+N +DLRG R E+A LD I A + + +I
Sbjct: 702 ---------AMHNTRVVKTASRNVSGHIDLRGERYEQAMMDLDHYIDQAMLNNIDTIEII 752
Query: 712 HGMGTGVVKERVLEILRNHPRVAKYE 737
HG GTG ++E V ++LR+ R+ YE
Sbjct: 753 HGKGTGALREGVTQMLRSDRRIKHYE 778
>gi|421871064|ref|ZP_16302686.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
gi|372459691|emb|CCF12235.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
Length = 785
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 217/735 (29%), Positives = 357/735 (48%), Gaps = 89/735 (12%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENL 66
H S L L+ L +LE +I CID ++ D AS +L IR E + R E L
Sbjct: 113 HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-DSASLELRQIRQEIRSSEARIREKL 171
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
D + + + Q + + ++T R R + +K ++ GI + S+SGAT F+EP
Sbjct: 172 DQMTRSSSTQKM----LMENIVTIRGDRFVIPVKQEYRSHF-GGIVHDQSASGATLFIEP 226
Query: 127 KGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
+ V NN E RL E IL LT +A + + + E+D FA+A
Sbjct: 227 EVIVSMNNKLREARLKEEHEVER--ILYTLTVLVADHVEMLLENLSVLAELDFIFAKAQL 284
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
A M + P L+ + ++ +HPL+ +P
Sbjct: 285 AYSMKAISPKLNEEGYILLKKG------RHPLI---------------DP---------- 313
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
VP+D+++ +V+TGPNTGGKT S+KTLGL SLM+ AGL++PA+
Sbjct: 314 ----------KVVVPLDVELGKGYTGIVVTGPNTGGKTVSIKTLGLLSLMTMAGLHIPAQ 363
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
+ F I ADIGD QS+EQ+LSTFS H++ I+ IL+ + +SLVL DE+G+GTDP+
Sbjct: 364 EETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNIIRILDQMDEKSLVLFDELGAGTDPT 423
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA SIL ++ + V TTHY++L NA+ EF ++TLRPTYR+L G
Sbjct: 424 EGAALAMSILDHVLAKGARLVATTHYSELKAYAYDTPEVVNASVEFDVQTLRPTYRLLVG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA IA +G + +II +A++ V +++++ ++ SL ++ E +
Sbjct: 484 VPGRSNAFAIASRLGLNEQIIDKARRSV-----SKEENQVEKMIASLESNKKTAEKERED 538
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A ++ + +L +++E+E + L K ++ + + A + + ++++ Q+R
Sbjct: 539 AENIRKQAEELRQQLEEERRQFAEAKNRLLEKAEEEARVAVQLASEEAEVIIREL-RQMR 597
Query: 545 DASAD-EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
D + + LI + A++E + + + G++V V S G K
Sbjct: 598 KEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKPAKAVRATQI--KIGDEVMVDSFGQKGT 655
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
+ +V + LVQ G ++++VKK+++ + K + P ++ R++ S
Sbjct: 656 VLDKVSSTE--YLVQLGIIKMKVKKDDMHVV-----KESVQPKKPVQYTTIKREANSV-- 706
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
K LDLRG VE++ ++D L A + +IHG GTGV+++
Sbjct: 707 --------------KLDLDLRGYNVEDSIQEIDRYLDDAVLSGFHKVSIIHGNGTGVLRK 752
Query: 722 RVLEILRNHPRVAKY 736
V E LR H V +
Sbjct: 753 GVHEFLRRHRSVKSF 767
>gi|256847954|ref|ZP_05553398.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715014|gb|EEU29991.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
Length = 791
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 203/691 (29%), Positives = 327/691 (47%), Gaps = 112/691 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R + ++A ++ G+ + S+SG T ++EP+ VE NN RL ++I E
Sbjct: 188 IITMRNDRYVIPVEAHYRSRF-GGVVHDQSASGQTLYIEPQNVVEINN---RLRQAQIEE 243
Query: 147 ETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
+ L+ L+A IA +EI + +D A+A A M P+++
Sbjct: 244 RQEVRRVLAELSALIAPYRKEIANNERLLGHLDFVNAKARLATKMHATLPVIND------ 297
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
D IN+ +HPL+ +P + VP DI+
Sbjct: 298 DGLINLRQARHPLI---------------DPQRV--------------------VPNDIQ 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + R +VITGPNTGGKT ++KTLGL LM ++G ++PA ++ FD + ADIGD Q
Sbjct: 323 LGDQYRTIVITGPNTGGKTITLKTLGLIQLMGQSGFFIPANEGSQITIFDNVFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
SLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL ++
Sbjct: 383 SLEQNLSTFSGHMENVKRILEQITERSLVLLDELGAGTDPKEGAALAMAILNQIQQVGSE 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V+TTHY +L + + NA+ EF ++T +PTYR++ G G SN + IA+ +G
Sbjct: 443 VVITTHYPELKVYGFERPQTINASMEFDVDTFQPTYRLMLGVPGQSNGIAIAQRLGLAST 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
+I AQ LV + + + + L+E+R++ A L AE ++E +
Sbjct: 503 VINDAQSLV-----KDDSQKLNAMIGELVEQRKQARENQERLAKLVAENQQKATDLEQKL 557
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDASADEI 551
+ + L K Q ++ AK + D ++ EN+L DA ++
Sbjct: 558 NRFNEQRDDLYEKARMQANHQVADAKRKADRIIHHLRQMEVQRGTQIKENELIDAQG-QL 616
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
N+L ++ +++ + + + G+ V VKS G ++ T++ G
Sbjct: 617 NALHRDPRLKRNKVLQRAKQKHNLKI------------GDAVKVKSYG-QVGTLIAKRGK 663
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
VQ G +++ + + ++ + S + +E
Sbjct: 664 HQWE-VQLGILKMAIDERDLEKVS----------------------SKVLAQAEKEQVVK 700
Query: 672 PR----VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV 723
P+ VQT + S LDLRG R E A L I A + + +IHG GTG +++
Sbjct: 701 PKRVRTVQTRRTSARLDLRGQRYEPAMANLSSFIDHALLNNLPSVTIIHGKGTGAIRKGT 760
Query: 724 LEILRNHPRVAKYEQESPMNY--GCTVAYIK 752
E LR++PRV +E SP N G T+ Y +
Sbjct: 761 QEYLRSNPRVKSFEYASPSNGGDGATIVYFE 791
>gi|392971758|ref|ZP_10337151.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
gi|392510297|emb|CCI60439.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
Length = 782
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 206/727 (28%), Positives = 356/727 (48%), Gaps = 99/727 (13%)
Query: 39 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
C + D AS +L+ IR++ + + + L K+ + ++T R R +
Sbjct: 142 CDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQGNQKKLSDAIVTVRNDRNVIP 201
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+KA ++ +GI + S+SG T ++EP VE +N N E E IL+ LT ++
Sbjct: 202 VKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQISSFRNDEAVERERILTELTVQV 260
Query: 159 AKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
A+ E + + + ++ +ID A+A +A+ + G P ++ D ++ + HPLL
Sbjct: 261 AE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFTT------DRTVYLPKAFHPLL 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+S+ +N+ D+E V+ITGPN
Sbjct: 314 DRTSV------VANTIEFAQDIE-----------------------------TVIITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KTLGL M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS H+
Sbjct: 339 TGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL ++ + L + TTHY +L
Sbjct: 399 NIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLVMATTHYPELKAYS 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
NA+ EF + TL PTY++L G G SNA +I+K +G + ++IQ+A+ ++
Sbjct: 459 YNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMQVIQKAKSMI----- 513
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + +E+ SL ++++ Q E+ L RE ++ L ++ A + E
Sbjct: 514 GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLVREAQEARDALAKQYAQYQNYE 566
Query: 518 TQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 574
Q + + A ++ + + D +LRD D+ + +KE E I + + +D
Sbjct: 567 KQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGADVKEHE----LIDKKKQLEDQ 621
Query: 575 FSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
+ + ++ G++V V + G K V+E+ GD + V VQ G +++++
Sbjct: 622 YEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLELIGDKEAV-VQMGIIKMKL--- 676
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
P+ + ++ P ++E+RQS K LDLRG R +
Sbjct: 677 ---PLEDLEKTKKTKETPAKMIKRENRQS------------------IKMELDLRGYRYD 715
Query: 690 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYG 745
EA +D L A + +++IHG GTG +++ V + L+ H V+ Y P +G
Sbjct: 716 EAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQKHLKRHKSVSSYRNGMPSEGGFG 775
Query: 746 CTVAYIK 752
TVA +K
Sbjct: 776 VTVAELK 782
>gi|167767441|ref|ZP_02439494.1| hypothetical protein CLOSS21_01960 [Clostridium sp. SS2/1]
gi|167710733|gb|EDS21312.1| MutS2 family protein [Clostridium sp. SS2/1]
gi|291558723|emb|CBL37523.1| MutS2 family protein [butyrate-producing bacterium SSC/2]
Length = 800
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 208/708 (29%), Positives = 339/708 (47%), Gaps = 84/708 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR K+ + + + L + + + + ++T R R C+ +K +
Sbjct: 145 ISDDASSTLKHIRRAMKQTNQKIHTQLTTLVSSVSNQDKLQDAIVTMRNGRYCIPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ G+ + S+SG T F+EP V NN L E +E ILS+L+ + +
Sbjct: 205 RSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILSEQASYGVD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + ++ +D FA+A +A+ +D PI D INI+ HPLL +
Sbjct: 264 DLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHPLLDRKKV- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI++ + + ++++TGPNTGGKT
Sbjct: 317 ----------------------------------VPINVSLGKDFSMLIVTGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H++ IV I+
Sbjct: 343 SLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSHMTNIVSIV 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 403 QQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKMFALSTDDI 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++ +
Sbjct: 463 ENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDESVKD----- 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++++ + LE +T EI++ +EIE + L R ++K K + ++
Sbjct: 518 ----FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKEKRDKMLRD 570
Query: 524 E-------LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI---AAIVEAHRPDD 573
++ AK D+ ++++ + + N ++ S + +E
Sbjct: 571 AREEAHNIISEAKEIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLRGRMTKLEGQMAYK 630
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ + G++V+V SL TV +P + VQ G MR V NI+
Sbjct: 631 SKKKNKKRHEANDFHVGDEVYVTSLS-LAGTVSTLPNAKGDLYVQMGMMRSLV---NIKD 686
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ +K A R ++ E R G + N+ AS P + ++ GM V+EA
Sbjct: 687 LEITK---TAKDVKRENQRNESRNRGRT-AINKSASIRPEI-------NVMGMTVDEAIA 735
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 736
QLD I AC + + + V+HG GTG +++ + + L+ R++ Y
Sbjct: 736 QLDKYIDDACLANLAQITVVHGKGTGALRKGLHNYFKQLKKQKRISGY 783
>gi|402838646|ref|ZP_10887149.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
gi|402272206|gb|EJU21427.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
Length = 785
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 349/729 (47%), Gaps = 105/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 452
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 453 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 743
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLGGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGEGG 776
Query: 744 YGCTVAYIK 752
G TVA +K
Sbjct: 777 MGVTVATLK 785
>gi|291521669|emb|CBK79962.1| MutS2 family protein [Coprococcus catus GD/7]
Length = 793
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 211/715 (29%), Positives = 344/715 (48%), Gaps = 71/715 (9%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
L+ L +I CI + D AS L+ IR + K E + S L + + +
Sbjct: 128 LSNLNHEIRRCI-IDEETMADDASPTLKSIRRQIKLTNERIHSQLASMVSSQNIGSKLQD 186
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
L+T R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L + E
Sbjct: 187 NLVTMRNGRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLRELGSKEKE 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL L+ KS ++ + + +D FA+A ++ +G P+ + +
Sbjct: 246 EIEHILDTLSELAGKSAVMLEQDIAVLTRLDFIFAKASLSRTYNGSEPVFNENGY----- 300
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I+ +HPLL + VPID+ +
Sbjct: 301 -IHIKKGRHPLLDKKKV-----------------------------------VPIDLILG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ R++++TGPNTGGKT S+KT+GL +LM +AGL++PA +H L FD + ADIGD QS+
Sbjct: 325 KDYRMLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDHSELAVFDDVFADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL ++LVL DE+ +GTDP+EG ALA +IL+ L +R +
Sbjct: 385 EQSLSTFSSHMTNIVRILNAADAKTLVLFDELCAGTDPTEGAALAIAILKTLLNRHVTTM 444
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L + NA EF + TL PTYR+L G G SNA I+ +G II
Sbjct: 445 ATTHYSELKVFALTTEQVCNACCEFDVATLSPTYRLLIGIPGKSNAFAISGKLGLPAHII 504
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A+K + + Q+ EL L R +E + ++ A++ L + +E++ +
Sbjct: 505 EEAKKNI-----DVQEQNFEELIADLETSRATIEKEQEELSAYKAQVESLKKRLEEKHDN 559
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
+ ++ + + ++ Q L AK D ++ N+L + ++ +L +E +
Sbjct: 560 ITKQKERILNEANEKAQNILQDAKDYADHTIRTM-NKLSKSGGVDMKALEQERSRVRDKL 618
Query: 566 VEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+++ ++ F G+ VHV+SL D TVV P + +Q G ++
Sbjct: 619 NQSNNRKKAAPTAQKAKVYAASDFKQGDSVHVRSL-DLKGTVVSQPNSKGELSIQMGILK 677
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
R+ +++ PI + N P + K GS + + V T S++L
Sbjct: 678 SRIHFSDLEPID----EEVIN-TPMINK---------TGSGKIKMNKAAHVNT---SINL 720
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G V+EA LD L A + +IHG GTG +++ V E LR V Y
Sbjct: 721 IGETVDEAMIDLDKYLDDAYLAHIPNVTIIHGRGTGALRKAVHEKLRKSKYVKSY 775
>gi|339007645|ref|ZP_08640219.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
gi|338774848|gb|EGP34377.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
Length = 785
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 217/735 (29%), Positives = 357/735 (48%), Gaps = 89/735 (12%)
Query: 11 HRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENL 66
H S L L+ L +LE +I CID ++ D AS +L IR E + R E L
Sbjct: 113 HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-DSASLELRQIRQEIRSSEARIREKL 171
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
D + + + Q + + ++T R R + +K ++ GI + S+SGAT F+EP
Sbjct: 172 DQMTRSSSTQKM----LMENIVTIRGDRFVIPVKQEYRSHF-GGIVHDQSASGATLFIEP 226
Query: 127 KGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
+ V NN E RL E IL LT +A + + + E+D FA+A
Sbjct: 227 EVIVSMNNKLREARLKEEHEVER--ILYTLTVLVADHVEMLLENLSVLAELDFIFAKAQL 284
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
A M + P L+ + ++ +HPL+ +P
Sbjct: 285 AYSMKAISPKLNEEGYILLKKG------RHPLI---------------DP---------- 313
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
VP+D+++ +V+TGPNTGGKT S+KTLGL SLM+ AGL++PA+
Sbjct: 314 ----------KVVVPLDVELGKGYTGIVVTGPNTGGKTVSIKTLGLLSLMTMAGLHIPAQ 363
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
+ F I ADIGD QS+EQ+LSTFS H++ I+ IL+ + +SLVL DE+G+GTDP+
Sbjct: 364 EETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNIIRILDQMDEKSLVLFDELGAGTDPT 423
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA SIL ++ + V TTHY++L NA+ EF ++TLRPTYR+L G
Sbjct: 424 EGAALAMSILDHVLAKGARLVATTHYSELKAYAYDTPEVVNASVEFDVQTLRPTYRLLVG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA IA +G + +II +A++ V +++++ ++ SL ++ E +
Sbjct: 484 VPGRSNAFAIASRLGLNEQIIDKARRSV-----SKEENQVEKMIASLESNKKTAEKERED 538
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A ++ + +L +++E+E + L K ++ + + A + + ++++ Q+R
Sbjct: 539 AENIRKQAEELRQQLEEERRHFAEAKNRLLEKAEEEARVAVQLASEEAEVIIREL-RQMR 597
Query: 545 DASAD-EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
D + + LI + A++E + + + G++V V S G K
Sbjct: 598 KEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKPAKAVRATQI--KIGDEVMVDSFGQKGT 655
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
+ +V + LVQ G ++++VKK+++ + K + P ++ R++ S
Sbjct: 656 VLDKVSSTE--YLVQLGIIKMKVKKDDMHVV-----KESVQPKKPVQYTTIKREANSV-- 706
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
K LDLRG VE++ ++D L A + +IHG GTGV+++
Sbjct: 707 --------------KLDLDLRGYNVEDSIQEIDRYLDDAVLSGFHKVSIIHGNGTGVLRK 752
Query: 722 RVLEILRNHPRVAKY 736
V E LR H V +
Sbjct: 753 GVHEFLRRHRSVKSF 767
>gi|313884242|ref|ZP_07818008.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
gi|312620689|gb|EFR32112.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
Length = 785
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 213/712 (29%), Positives = 352/712 (49%), Gaps = 92/712 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+L AS +L IR +++ E + + L ++ A + LIT R +R + +KA H
Sbjct: 146 VLSSASTELARIRRAQQQTEEAVRNQLNQILKN--NASALSDTLITIRNNRYVLPVKADH 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K + G + SS+G T ++EP+ NN L + E E IL L+ ++
Sbjct: 204 KSQIK-GTVHDQSSTGQTLYIEPRSVETLNNRRSHLQSEENNEIAQILMDLSGQLMPYYE 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I+ + ++D +RA + + + V P +S HVS + +HPLL
Sbjct: 263 DIRQNQYIIGQLDYIQSRASYGRQLQAVRPKVSPDRHVSLIQA------RHPLL------ 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K V N +I + + R ++ITGPNTGGKT
Sbjct: 311 ---------DP-KQVVAN-------------------NIIIGQDYRTLIITGPNTGGKTI 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
+KTLG+ LM +AGL++PA+ ++ FD + ADIGD QS+EQ+LSTFSGH++ +DIL
Sbjct: 342 LLKTLGILHLMGQAGLHIPAQKGSQIGLFDQVFADIGDEQSIEQSLSTFSGHMTNTIDIL 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ + +SL+L DE+GSGTDP EG ALAT+IL YL + TTHY +L +
Sbjct: 402 KHATYQSLLLFDELGSGTDPQEGAALATAILDYLTGAGMTTMATTHYPELKVYAHEAPHT 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF+ ETL PTYR+L G G SNAL I++ +G I+++A++ V +
Sbjct: 462 INASMEFNAETLAPTYRLLIGIPGRSNALEISQRLGLPDYILEKARQGV-----SQDSQS 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQ 520
+E+ +L ERR+LE+ + A+ L +++ E DR + A K +
Sbjct: 517 INEMVANLETERRRLEADHQETEHRLAQADQLLKDLRTE---YDRWVTYKDALVEKAKHE 573
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESE--SAIAAIVEAHRPDD--DF 575
+++ A+ + D ++Q+ +RD ++ N+ IKE + +P++
Sbjct: 574 ANMKVDQAQKEADKLIQE----IRDLQLEQGQNTTIKEHVLIDKKGKFDQLKQPENLRKN 629
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
V + + + G+ V V S G + + V +V DD T VQ G +++ + ++ I
Sbjct: 630 KVLKRQKAKQELRVGQDVLVHSYGQRGSIVDKV--DDKTFTVQMGILKMNLPAKDLEVIE 687
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
+ + K + N + G +V T SLDLRG R E+A ++
Sbjct: 688 SIEAKKS--------------------RVNVQRKAGAKVTT---SLDLRGRRYEDAMNET 724
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
+ L A + ++ +IHG GTG +++ + ++L HP+V ++ SP N G
Sbjct: 725 KLYLDKALLSNHPMVTIIHGKGTGALRQGIQQLLAVHPQVDHFDY-SPPNAG 775
>gi|260437715|ref|ZP_05791531.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292809738|gb|EFF68943.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 791
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 224/750 (29%), Positives = 361/750 (48%), Gaps = 89/750 (11%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L E N L+++ +I CI + I D AS +L+ IR ++K E + S L + +
Sbjct: 117 LSERFNMLNPLSDILNEINRCIISETEI-ADDASTNLKDIRRQQKNVNERIKSELSHMIS 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
++ + ++T R R CV +KA ++ +P G+ + S++G+T+F+EP V+ NN
Sbjct: 176 GSYRTY-LQDAVVTTRDGRYCVPVKAEYRSQVP-GMIHDQSNTGSTFFIEPMSIVKLNND 233
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
L E E + ILS L+A E+ D + E+D FA+AGF+ G PI+
Sbjct: 234 LRELEIKESEEISVILSSLSAMAGNYTTELLTNYDILKELDFIFAKAGFSHSYKGSEPIM 293
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
D INI+ +HPL+ S +
Sbjct: 294 DC------DGKINIKKGRHPLIDSSKV--------------------------------- 314
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VP+DI + ++ITGPNTGGKT ++KT+GL SLM ++GL++PA ++ +L F+ I
Sbjct: 315 --VPVDIYLGDGYEQLIITGPNTGGKTVTLKTIGLFSLMGQSGLHIPASDNSKLTVFNDI 372
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ IV IL+ SLVL DE+ +GTDP+EG ALA SIL+
Sbjct: 373 FADIGDEQSIEQSLSTFSSHMKNIVYILKKADSNSLVLFDELCAGTDPTEGAALAISILR 432
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
L + + TTHY++L ENA EF + +L PTYR+L G G SNA I+
Sbjct: 433 TLHSKKITTIATTHYSELKIYALSTDGVENACCEFDVASLAPTYRLLIGIPGKSNAFAIS 492
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+G +II+ A+ + + ++ L + R +E + EI +L
Sbjct: 493 GKLGLPSEIIENAKANIGTSAKAFE-----DVISDLEKSRVTIEKEQAEIELYKKEIEEL 547
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--------AS 547
++ + + LD ++ + K ++ L AK D ++DF ++ A
Sbjct: 548 KNRLKIKTERLDEKSDSIIEKAREEADAILREAKETADETIRDFNKAAKNGMTIQDLEAG 607
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
+ I ++++ + A A++P V +N ++ G++VHV S+ D TV
Sbjct: 608 RERIRKQLEKTNAKKA----ANKP-----VQTSNHTAADFHIGDKVHVISM-DLDGTVHT 657
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG-SSNE 666
+P + V G + +V NI+ + K A+ +L +++SG N+
Sbjct: 658 LPDSKGFLTVSMGILNSKV---NIKDLIILKE---ASETEKLN----NKKSGIGKLKMNK 707
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
AS P + +L GM +EA LD L A S + ++HG G+GV++ V
Sbjct: 708 TASISPEI-------NLIGMTSDEAIIALDKYLDDAFLAHISPVRIVHGKGSGVLRNAVH 760
Query: 725 EILRNHPRVAKYEQES--PMNYGCTVAYIK 752
L+ V + + +YG T+A K
Sbjct: 761 NYLKRQKHVKSFRLGTFGEGDYGVTIAEFK 790
>gi|377809473|ref|YP_005004694.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
gi|361056214|gb|AEV95018.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
Length = 786
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 200/673 (29%), Positives = 336/673 (49%), Gaps = 79/673 (11%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P++T R R + +K ++ L G+ + S+SG T ++EP+ VE NN + +
Sbjct: 185 LSEPIVTIRNERFVLPVKTEYRSKLG-GVVHDQSASGQTLYIEPEAVVELNNDLRQNQVA 243
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHV 201
+ EE I L+ E+ R+ D +L DL A+A +A I +++ +
Sbjct: 244 VVHEEQRIFQELS-ELVAPHRDTLKQNDHILGHFDLLNAKARYA------AKIKATEPKI 296
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
S D+ IN+ +HPL+ + + VG+ D
Sbjct: 297 SEDNQINLRKARHPLI-----------------------DPKRVVGN------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + + ++ITGPNTGGKT S+KT+GL LM ++G+++PA + + FD I ADIGD
Sbjct: 322 IRLGKDFKTLIITGPNTGGKTISLKTVGLLQLMGQSGIFIPANENSTIGIFDEIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ I+ IL + SLVL DE+G+GTDP EG ALA +IL +R+
Sbjct: 382 EQSIEQNLSTFSSHMDNIIHILAQIDNNSLVLFDELGAGTDPKEGAALAIAILDDVRNHA 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
L + TTHY +L + + NA+ EF++ETL+PTY++L G G SNA +I+ +G D
Sbjct: 442 SLVMATTHYPELKTYGYERSETINASMEFNVETLKPTYKLLIGIPGQSNAFDISSRLGLD 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ LV ++ + + + L + +RK++ + + + I D
Sbjct: 502 NRLISQARDLV-----DQDSQDLNNMIKDLTDRQRKVDKLYDQLDNTVGQASGYQKTIVD 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
E L+ R A L + ++ + ++ +K + D +++ A N LI E++S
Sbjct: 557 ELNTLNNRRAQLLEQAKEEANRIVDNSKSEADGIIKRLRKMESAGVAFRENDLI-EAKSN 615
Query: 562 IAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
I A+ E++ + N +F ++V V S G + + +V DD VQ G
Sbjct: 616 INALRQESNLKRNKVLRRAKNKQTF--HVNDEVIVSSYGQRGELLRKV--DDKHWEVQMG 671
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++++V + + + K K ++ A R +GSAG + +
Sbjct: 672 IIKMKVSTDEMEKVDPEKSKPVSHRASVQR-------TGSAG--------------IRAT 710
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG R EEA + D I A + +IHG GTG ++ + + L+++ R+ +E
Sbjct: 711 LDLRGKRYEEAMTETDRYIDAALLAGYDQVTIIHGKGTGALRTGITKYLQSNRRIKGFEY 770
Query: 739 ESPMNYGCTVAYI 751
+P N G A I
Sbjct: 771 -APANAGGNGATI 782
>gi|302871595|ref|YP_003840231.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574454|gb|ADL42245.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 786
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 213/708 (30%), Positives = 361/708 (50%), Gaps = 96/708 (13%)
Query: 44 ILDRASEDLELIRAERKRNME-----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
ILD AS L+ IR +R R +E L+ +++ Q F + +P+IT R ++ +
Sbjct: 141 ILDTASPRLKDIR-DRIRRLEAKIRDELNRMIRDPKIQRF----LQEPIITVRGDKLLLP 195
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL-LTAE 157
+KA HK + GI + S++GAT F+EP VE +N ++R++ SE EE L L+
Sbjct: 196 VKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN-QIRVARSEEKEEIEKLLQELSQL 253
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
I+ S EIK + + E+D+ F +A +A PIL++ + IN++ +HPL+
Sbjct: 254 ISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGY------INLKKARHPLI 307
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+ + E V+VITGPN
Sbjct: 308 KKEKV-----------------------------------VPIDVHLGKEFDVLVITGPN 332
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT+GL L++++G+++PA + + F I ADIGD QS+ Q+LSTFS H+
Sbjct: 333 TGGKTVTLKTIGLFCLLAQSGVFIPADDRSEVCVFSKIFADIGDEQSIIQSLSTFSAHMK 392
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
I++I + +LVL+DEIGSGTDP EG ALA +IL++L ++ V TTHY +L
Sbjct: 393 NIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAILKFLHNKGAKVVATTHYGELKTFA 452
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
++ RFENA+ EF + TL+PTYR+L G G SNAL I+ ++G +++II+ A+ + +
Sbjct: 453 QQEERFENASCEFDINTLKPTYRLLIGIPGMSNALYISSNLGLNKEIIELAKGYMSKKTL 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E +++ + +RR+LE +A L +E +L + +E+E + + +K +
Sbjct: 513 EL-----TDIINEMERKRRELEEALESANKLKSEAEELKKTLEEERRRFEAEKQKIKERA 567
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI----KESESAIAAIVEAHRPDD 573
+++ ++ + + +++ + ++ + E+ + +E E+ + +I +A R
Sbjct: 568 SKEAREFVQKVEDEVEKLFKELKKIAESLKEKEMLKQLEEKKREYENLVKSIEQASR--- 624
Query: 574 DFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
E S P+ G++V+VKS D V +P + V+ G M++ V N
Sbjct: 625 ----KEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPDSKGNLTVRIGIMKLSV---N 676
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
I I + + A +K E Q ++ S+D+RG +
Sbjct: 677 ISDIFEIEEETATKNLVSSKKGVEINQ-----------------KSIDMSIDVRGKTSND 719
Query: 691 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A ++D L A + +IHG GTGV+++ + LR HP V +
Sbjct: 720 AILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQTIRSFLRRHPHVKSF 767
>gi|365853718|ref|ZP_09393983.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
gi|363711876|gb|EHL95582.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
Length = 788
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 209/729 (28%), Positives = 355/729 (48%), Gaps = 107/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L IR ++ N+ + + K + ++ + +P+IT R R + I+A +
Sbjct: 147 VLDSASSQLRAIRRTIEQTQSNIRTRMGKYL-KGSESKYLSEPIITVRDERFVLPIRAEY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + S+SG T ++EP VE NN R +E E+ IL+ LT I +
Sbjct: 206 KSHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERTEQRRILAELTEMIRPYRQ 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ M+ V ++D A+A +A V P +S+++ +N+ +HPL+ +
Sbjct: 265 ELLENMNLVGQLDFVNAKAKYAHQSGAVLPKISTEN------VVNLRHARHPLIAKEKV- 317
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VP DIK+ + + +++TGPNTGGKT
Sbjct: 318 ----------------------------------VPNDIKIGADYQTIIVTGPNTGGKTI 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ I+
Sbjct: 344 TIKTVGLLQLMGQSGLFITADEESQIGVFDDVFADIGDDQSIEANLSTFSSHMDNIIAIM 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ ++ +SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 404 KQLTDKSLVLLDELGAGTDPKEGAALAMAIIDAIHRSGCEMIATTHYPELKAFAYNRPGI 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ--Q 461
NA+ EF +ETLRPTYR+L G G SNALNIA +G +I+Q+A+ + E Q
Sbjct: 464 INASMEFDVETLRPTYRLLLGIPGQSNALNIASRLGMPEQIVQQAKSFTD---SENQDIN 520
Query: 462 HRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
+ +EL + +E +L ++ A LHA++ + + +++ DR H + +
Sbjct: 521 NMIAELTSQTKRAHDEADELATELSEATKLHADLQKRFDQYQNQK---DRLQEHAREQAN 577
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ V++ AK D ++ D + R + +KE+E +++A + V+
Sbjct: 578 EIVEK----AKHNADKIIADLHRKQRQVG----KTTVKENE-----LIDAKGALNQLEVA 624
Query: 579 ---------ETNTSSFTPQFGEQVHVKSLGDKLATVV--EVPGDDDTVLVQYGKMRVRVK 627
+ + + G++V VKS G + T++ E G D +Q G ++++++
Sbjct: 625 PSLKRNKVLKKEKAKHNFKAGDEVLVKSYGQQ-GTLIRQEKNGLWD---IQLGILKMQIE 680
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+ ++ + P+ + Q ++ S G S +LDLRG R
Sbjct: 681 EADLEKV-------GKQAQPKAKYQTHVSRTRSTGMS--------------PTLDLRGHR 719
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--N 743
EEA ++LD + A + +IHG GTG +++ V + L+ + RV + +P
Sbjct: 720 YEEAMYELDRYVDSALLAGYPTITIIHGKGTGALRKGVTDYLKRNSRVKSFGYSAPNAGG 779
Query: 744 YGCTVAYIK 752
G TV K
Sbjct: 780 DGSTVVQFK 788
>gi|429762236|ref|ZP_19294636.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
gi|429182050|gb|EKY23175.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
Length = 800
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 209/708 (29%), Positives = 338/708 (47%), Gaps = 84/708 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR K+ + + + L + + + ++T R R C+ +K +
Sbjct: 145 ISDDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRYCIPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ G+ + S+SG T F+EP V NN L E +E ILS+L+ + +
Sbjct: 205 RSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILSEQASYGVD 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ + ++ +D FA+A +A+ +D PI D INI+ HPLL +
Sbjct: 264 DLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHPLLDRKKV- 316
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI++ + + ++++TGPNTGGKT
Sbjct: 317 ----------------------------------VPINVSLGKDFSMLIVTGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H++ IV I+
Sbjct: 343 SLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSHMTNIVSIV 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 403 QQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKMFALSTDDI 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++ +
Sbjct: 463 ENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDESVKD----- 517
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++++ + LE +T EI++ +EIE K L R ++K K + ++
Sbjct: 518 ----FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRKSLKSRQDNIKEKRDKMLRD 570
Query: 524 E-------LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI---AAIVEAHRPDD 573
++ AK D+ ++++ + + N ++ S + +E
Sbjct: 571 AREEAHNIISEAKEIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLRGRMTKLEGQMAYK 630
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ + G++V+V SL TV +P + VQ G MR V NI+
Sbjct: 631 SKKKNKKRHEANDFHVGDEVYVTSLS-LAGTVSTLPNAKGDLYVQMGMMRSLV---NIKD 686
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ +K A R ++ E R G + N+ AS P + ++ GM V+EA
Sbjct: 687 LEITK---TAKDVKRENQRNESRNRGRT-AINKSASIRPEI-------NVMGMTVDEAIA 735
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 736
QLD I AC + + + V+HG GTG +++ + + L+ R++ Y
Sbjct: 736 QLDKYIDDACLANLAQITVVHGKGTGALRKGLHNYFKQLKKQKRISGY 783
>gi|403046921|ref|ZP_10902390.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
gi|402763617|gb|EJX17710.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
Length = 782
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 206/727 (28%), Positives = 355/727 (48%), Gaps = 99/727 (13%)
Query: 39 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
C + D AS +L+ IR++ + + + L K+ + ++T R R +
Sbjct: 142 CDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQGNQKKLSDAIVTVRNDRNVIP 201
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+KA ++ +GI + S+SG T ++EP VE +N N E E IL+ LT ++
Sbjct: 202 VKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQISSFRNDEAVERERILTELTVQV 260
Query: 159 AKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
A+ E + + + ++ +ID A+A +A+ + G P ++ D ++ + HPLL
Sbjct: 261 AE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFTT------DRTVYLPKAFHPLL 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+S+ +N+ D+E V+ITGPN
Sbjct: 314 DRTSV------VANTIEFAQDIE-----------------------------TVIITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KTLGL M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS H+
Sbjct: 339 TGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL ++ + L + TTHY +L
Sbjct: 399 NIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLVMATTHYPELKAYS 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
NA+ EF + TL PTY++L G G SNA +I+K +G + ++IQ+A+ ++
Sbjct: 459 YNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMQVIQKAKSMI----- 513
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + +E+ SL ++++ Q E+ L RE ++ L ++ A + E
Sbjct: 514 GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLVREAQEARDALAKQYAQYQNYE 566
Query: 518 TQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 574
Q + + A ++ + + D +LRD D+ + +KE E I + + +D
Sbjct: 567 KQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGADVKEHE----LIDKKKQLEDQ 621
Query: 575 FSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
+ + ++ G++V V + G K V+E+ GD + V VQ G +++++
Sbjct: 622 YEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLELIGDKEAV-VQMGIIKMKL--- 676
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
P+ + ++ P ++E RQS K LDLRG R +
Sbjct: 677 ---PLEDLEKTKKTKETPAKMIKRESRQS------------------IKMELDLRGYRYD 715
Query: 690 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYG 745
EA +D L A + +++IHG GTG +++ V + L+ H V+ Y P +G
Sbjct: 716 EAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQKHLKRHKSVSSYRNGMPSEGGFG 775
Query: 746 CTVAYIK 752
TVA +K
Sbjct: 776 VTVAELK 782
>gi|363893691|ref|ZP_09320786.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
gi|361963493|gb|EHL16565.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
Length = 785
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 348/729 (47%), Gaps = 105/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS DL IR + +N+ + L + + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILEKLKSKNILTVATTHYSELKNYALTQENV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 452
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 453 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 743
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGEGG 776
Query: 744 YGCTVAYIK 752
G TVA +K
Sbjct: 777 MGVTVATLK 785
>gi|333370261|ref|ZP_08462275.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332978201|gb|EGK14933.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 784
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 214/699 (30%), Positives = 348/699 (49%), Gaps = 84/699 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGI 99
+ D AS +L IR RN+ L ++ + + K P+IT+R R + +
Sbjct: 146 VTDDASPELGRIR----RNIRQLQGAIRTTLDEFLRHSQYQKMLQDPIITQRNDRYVIPV 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ + GI + S+SG T F+EP+ V NN L E E IL LTAE+A
Sbjct: 202 KQEYRGAV-RGIVHDQSASGQTLFIEPQAVVNQNNRLRELELEEEREVERILGELTAEVA 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+++ + + ++DL A+A + M G+ P V+ D I ++ +HPL+
Sbjct: 261 DKADDLESNLSVLTQLDLILAKARLGKRMKGIVP------GVNMDGFIRLKRARHPLI-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
P+K VP D+++ E R +VITGPNTG
Sbjct: 313 --------------PMKE-------------------AVPNDVELGREQRAIVITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM+++GL +PA+ L F + ADIGD QS+EQNLSTFS H++ I
Sbjct: 340 GKTVTLKTVGLLALMAQSGLPIPAEEESDLAIFTGVYADIGDEQSIEQNLSTFSSHMTNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V IL+ + SLVL+DE+G+GTDP+EG ALA S+L+ + ++ V TTHY +L
Sbjct: 400 VHILDSMDENSLVLLDELGAGTDPTEGAALAISVLERVLEQGCRVVATTHYNELKLYAHA 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF +E+L PTYR+L G G SNA I++ +G ++IQ A+ +
Sbjct: 460 REGVINASVEFDVESLSPTYRLLTGVPGRSNAFEISRRLGLPEEVIQAAKSQL-----SS 514
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+++R E+ +L E+RR+ E + R A +L + L ++++ + + DR ++ +
Sbjct: 515 EENRLEEMIGALSEDRRRAEKERREAEALRQQAEALLQDLKLKMESWDREKERIRESARR 574
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + ++ AK + D V++ R+ + + E++ + E P+ + S
Sbjct: 575 EAKTIVSRAKREADAVLEQLRRWARERPGELKEHRLIEAKKRL----EDAEPETPTAQSV 630
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
S+ + G++V V++LG K V++ G+ + VQ G M+++V + +
Sbjct: 631 DRESTRQIRVGDEVLVRTLGQK-GQVIDQLGERE-FQVQVGIMKMKVGREQL-------- 680
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
+ +P QE G SY R + LDLRG VEEA ++D L
Sbjct: 681 EWKGSPP------QESPDKGG-------TSYRRRSDQVRPELDLRGRMVEEAIPEIDKYL 727
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + +IHG GTG ++ V + L HPRV Y
Sbjct: 728 DDALLTGFDHVSLIHGKGTGALRTGVRKFLDQHPRVKSY 766
>gi|150389498|ref|YP_001319547.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
gi|229486330|sp|A6TNX0.1|MUTS2_ALKMQ RecName: Full=MutS2 protein
gi|149949360|gb|ABR47888.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
Length = 789
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 211/746 (28%), Positives = 363/746 (48%), Gaps = 89/746 (11%)
Query: 19 LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 76
L++ +E++I CI D + I D AS L+ IR + + + + L +
Sbjct: 121 LIQGLQSFRAIEDRIEICIVSDTE---ISDHASSTLKNIRRQISSKNDAVRNKLNGIINS 177
Query: 77 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 136
+ +IT R+ R V +K H+ +P G+ + SSSGAT F+EP V+ NN
Sbjct: 178 STTQKYLQDAIITMRQDRYVVPVKQEHRGNVP-GLIHDQSSSGATLFVEPMAVVQLNNEL 236
Query: 137 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 196
L E E IL + IA+ E++ + ID FA+ + M GV P+L+
Sbjct: 237 RELKIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKGVEPLLN 296
Query: 197 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 256
+ +++I+ +HPLL +D
Sbjct: 297 ------VEGNVHIKNGRHPLL-----------------------------------NADE 315
Query: 257 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 316
VP ++ + + +VITGPNTGGKT ++KTLGL S+M+++GL++PA RL FD I
Sbjct: 316 VVPTNLWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIF 375
Query: 317 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 376
ADIGD QS+EQ+LSTFS H++ IV+I+E V+ SLVL DE+G+GTDP+EG AL +IL +
Sbjct: 376 ADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNH 435
Query: 377 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 436
LR+ V TTHY++L + ENA+ EF + TL PTYR+L G G SNA I+K
Sbjct: 436 LREMNVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISK 495
Query: 437 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 496
+G ++QRA++ + + +L Q++ + RR+ E + + A + E
Sbjct: 496 KLGLPDGLVQRAKRFL-----SQDTIHFEDLLQNIEKNRRESEIERQEAKRIRLEAEKFA 550
Query: 497 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 556
ED + L+ + + ++ + + AK+ + +++ + A E+N ++
Sbjct: 551 EGYEDRKQRLEAQRDQILRDAKKEAYRLVKEAKMDSEHIIKGLREMKFELEAKEMNKKME 610
Query: 557 ESESAIAA----IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++++ + + + H+ + + G+ V + SL +++ V+
Sbjct: 611 DAKNQLTGKMNDLSDHHQ---QILNKKNKKPPKNLKPGDAVRILSL-NQVGHVLNEVDPK 666
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
V VQ G M+V + +N+ R+ +++ +QSG+
Sbjct: 667 GEVQVQAGIMKVNMHISNLE---------------RVSPEKDIQQSGTG------KIMKS 705
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+ +K+ +D+RG +EEA ++D L + + + +IHG+GTGV+K + ++L+ +
Sbjct: 706 KTGDTKSEVDVRGKNLEEAMLEIDKYLDDSYIVGLTQVTIIHGVGTGVLKAGIKQMLKKN 765
Query: 731 PRVAKYEQ----ESPMNYGCTVAYIK 752
V + + E M G T+ +K
Sbjct: 766 KHVRTHREGVYGEGGM--GVTIVELK 789
>gi|238019115|ref|ZP_04599541.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
gi|237863814|gb|EEP65104.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
Length = 812
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P + VP +I++ R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNIQLGTSYRILLITGSNTGG 355
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R E + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ ++Q + + D+ S I + I+ + P DD S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGISNVHVPEAPVDDDRKSLT 651
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 EREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|433655413|ref|YP_007299121.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293602|gb|AGB19424.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 328/659 (49%), Gaps = 84/659 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQ 242
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E ILS LT +I++ EI M + E+D+ FA+A ++ + P+ ++ +
Sbjct: 243 EIEKILSELTDDISQHISEIHENMIALTELDVIFAKAKYSINTNSSKPVFNTHGY----- 297
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
IN++ +HPLL P D VPI + +
Sbjct: 298 -INLKNARHPLL----------------P-------------------KDAVVPISVYLG 321
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+VITGPNTGGKT ++KT+GL +LM+ +GL +P + +FD I DIGD QS+
Sbjct: 322 DSFDTLVITGPNTGGKTVTLKTVGLLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSI 381
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVTILNSVTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTI 441
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L K+ ENA+ EF +ETLRPTYR+ G G SNA I++ +G + +II
Sbjct: 442 ATTHYSELKQYALKNDGVENASVEFDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEII 501
Query: 446 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
A+ + E L+ E ++ + L ++R + E L ++ + E E +
Sbjct: 502 DNARNYITNEELKFE-------DIIKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKR 554
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 562
+ + + K ++ ++ L K D ++ +LR+A +D+ N LI+E+ +
Sbjct: 555 RQTEAERDRIIEKAREKARKILENTKSTADEIIA----KLREAEKSDKKNKLIEEARKKL 610
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ ++ SE P+ G+ ++ L D+ T + P D V +Q
Sbjct: 611 KENISEM--EESLKKSEVPVYKKIPKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQA 667
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V +N+R + + K +L K G A NE++S + T
Sbjct: 668 GILKMNVHISNLREAESDEEK-------KLEK-------GFATYINEKSS---NIST--- 707
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+DLRG +EEA +++ L A + VIHG GTG+++ + +L+ + V +
Sbjct: 708 SIDLRGKTLEEAEIEVEKYLDDAYLAGLKQVTVIHGKGTGILRSGIARLLKMNKHVKSF 766
>gi|419858984|ref|ZP_14381641.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497345|gb|EKP88819.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 795
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 213/749 (28%), Positives = 371/749 (49%), Gaps = 99/749 (13%)
Query: 16 LLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
L ++L N LT+ L +++ +D + +LD ASE+L IR N+ +LL K
Sbjct: 118 LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRKNISTTQNNVRTLLVK 176
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ A + +P+I+ R + + +K+ ++ G+ + S SG T ++EP+ V+
Sbjct: 177 MTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQSGLTLYIEPQATVDL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++I E +IL ++ ++ ++K D + E+DL A+A A M+ +
Sbjct: 235 NNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDLIQAKAKLANSMNAIK 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P H++ + I+++ +HPLL S
Sbjct: 295 P------HLNDEKVIDLKNARHPLLASDS------------------------------- 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
V DI++ + ++ITGPNTGGKT +KTLGL LM++ G+++ A + + F
Sbjct: 318 -----VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQTGIFITAGSDSSIYVF 372
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+G+GTDP EG ALA +
Sbjct: 373 NNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDELGAGTDPGEGAALAMA 432
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
I++ L R L ++TTHY +L D+ NA+ EF T PTYR+L G G SNA+
Sbjct: 433 IVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSPTYRLLLGVPGQSNAI 492
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL---ESQARTAAS-- 487
I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR L ES+ R S
Sbjct: 493 AISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRDLSKEESELRNQLSRA 547
Query: 488 ------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKVQIDTVVQD 538
L+ ++ + + E D +A H+ + +E++Q+ ++ +++ +
Sbjct: 548 EQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLDQIRRERLKAGSSTGK 607
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
E QL+ AD+I+ L +++ +++ + F V GE+V V S
Sbjct: 608 NEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------------GEEVMVSSY 654
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
T+++ + + VQ G +++ V +N++ + + K P R++ + + +
Sbjct: 655 HQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKINEPVHRVKNTRVFKTA 712
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 716
S + +DLRG R E+A LD I A + + +IHG GT
Sbjct: 713 SKNISGH---------------IDLRGERYEQAMIDLDRYIDQAMLNNIDTIEIIHGKGT 757
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMNYG 745
G +++ V ++LR+ R+ Y+ +P G
Sbjct: 758 GALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|294791999|ref|ZP_06757147.1| MutS2 protein [Veillonella sp. 6_1_27]
gi|294457229|gb|EFG25591.1| MutS2 protein [Veillonella sp. 6_1_27]
Length = 792
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 199/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R E + ++E E K + + AK
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETGRMRGQLEKEKKQFNENRKQILAKAQAD 571
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ + Q + + D + S I + I+++ H P+
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
+ ++ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 688 AREQKAVMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 734
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGINQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|425738677|ref|ZP_18856935.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
gi|425479024|gb|EKU46205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
Length = 782
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 218/748 (29%), Positives = 353/748 (47%), Gaps = 91/748 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L E ++ LT+L + I C + D AS L IR++ + L K
Sbjct: 118 YPILNEQIEQLPVLTDLYQTIHQT--CDESDLFDDASPTLHSIRSKISTTNHRIRQQLDK 175
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + ++T R R + +KA ++ +GI + S+SG T ++EP VE
Sbjct: 176 IVKSQSNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEM 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN RL + E E IL+ LT +A + ID A+A +A+ + G
Sbjct: 235 NNQISRLRSEEDTERARILTELTTLVATDSEGCLSAESIMGHIDFLTAKARYARSIKGTK 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P ++ + + HPLL ++ SN+ + D+E
Sbjct: 295 PTFTTNRDIYLPKAF------HPLLDAETV------VSNTIEFEPDIE------------ 330
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSKLGVF 373
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
D + DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDP+EG LA S
Sbjct: 374 DHVFCDIGDEQSIEQSLSTFSSHMKTIVNILDEANQNSLILFDELGAGTDPTEGATLAMS 433
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL Y+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDYVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 490
I+K +G +II A+ +V E +S + + E++ +L++ R A ++H
Sbjct: 494 EISKRLGLKLQIINHAKSMVGHDEKEINAMIESLERNTKRVDEQKIELDALIREAETMHK 553
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E+ Y ++ K L +A K K Q+V++ A + DT++++ Q+RD +
Sbjct: 554 ELDQTYTAYQNYEKRLMEQA---KEKANQRVKE----ATKEADTILKELR-QMRDKKGVD 605
Query: 551 I--NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+ + LI + + +E D + + G++V V S G K V+E+
Sbjct: 606 VKEHELIDKKKR-----LENQYEADSLKANVKKKKWDKIKAGDEVKVLSYGQK-GEVLEL 659
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
DDD +VQ G +++++ P+ + ++K P + +R S
Sbjct: 660 L-DDDEAVVQMGIIKMKL------PLNDLEKKEKQKEKPSKMVTRHNRTS---------- 702
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
K LDLRG R E+A +LD L A + +++IHG GTG +++ V +
Sbjct: 703 --------VKMELDLRGYRYEDALIELDQYLDQAVLSNYENVYIIHGKGTGALQKGVQKH 754
Query: 727 LRNHPRVAKYEQESPM--NYGCTVAYIK 752
L+ H +A + P +G TVA +K
Sbjct: 755 LKRHKSIASFRSGVPSEGGFGVTVAELK 782
>gi|416999068|ref|ZP_11939737.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ACS-068-V-Sch12]
gi|333977221|gb|EGL78080.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ACS-068-V-Sch12]
Length = 812
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 319/658 (48%), Gaps = 73/658 (11%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT+R +R + +K ++ DG+ + S++G T ++EP V NN L + I E
Sbjct: 204 IITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGE 259
Query: 147 ETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
E +L + L+A + + ++ ++V I+ + +A A GV ILS+
Sbjct: 260 EQEVLRIYRELSALVKQHSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------ 313
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
D ++N+ +HPL+ P + VP +I+
Sbjct: 314 DRTVNLMRARHPLI----------------P-------------------PNVVVPTNIQ 338
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ R+++ITG NTGGKT S+KTLGL SLM++ GL++PA + LP F I ADIGD Q
Sbjct: 339 LGTSYRILLITGSNTGGKTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQ 398
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG ALA SIL++ R + L
Sbjct: 399 SIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGAL 458
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+V+THY +L EN EF TL+PTYR+ G G S+AL+IA +G +
Sbjct: 459 MMVSTHYNELKNYAYHTEGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKD 518
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
I+ RA + + + H E+ L E+ RK + R E + ++E E
Sbjct: 519 IVTRAAE----YKSQFGSHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEK 574
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
K + + + K + +V+ + +++ ++Q + + D+ S I + I+
Sbjct: 575 KQFNEKRKQILTKAQADAESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGIS 634
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+ H P+ + ++ T + G+ V+V SL L TV+ + G+ V +
Sbjct: 635 NV---HIPESPVDDDRKSLTADTIKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTAT 690
Query: 624 VRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
V+V ++ R N + P+ RK R GSA +E + +
Sbjct: 691 VKVSELQSTTREEGNKLEREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEI 737
Query: 682 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
++ G V+EA+ + I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 738 NILGQTVDEATVSVGRFIDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|325568915|ref|ZP_08145208.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
gi|325157953|gb|EGC70109.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
Length = 787
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 156
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILTELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVD+L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 508
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 567
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 688 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 746 CTVAYI 751
A I
Sbjct: 778 GNGATI 783
>gi|418016394|ref|ZP_12655959.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506729|gb|EGX29023.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
Length = 801
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 351/739 (47%), Gaps = 126/739 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +
Sbjct: 159 ISDFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEY 216
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 217 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 275
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I + + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 276 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 324
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ DV VP+++ + + ++ITGPNTGGKT
Sbjct: 325 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 354
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ +
Sbjct: 355 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 414
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ + ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 415 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 474
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 475 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY------------ 522
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQ 519
L E+ K ES +T E + REIE +E K L D+ L+ E +
Sbjct: 523 -------LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKE 575
Query: 520 QVQ----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAI 565
+++ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 576 KLRIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI 628
Query: 566 VEAHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ D ++E N+S F +F G +K +G + ++E P VLVQ
Sbjct: 629 --KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQA 685
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V NI + + + + ++ K + D + R T
Sbjct: 686 GVLKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTIST 724
Query: 680 SLDLRGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
SLDLRGM + E LD A + + +IHG GTGV+K + +LRNH V
Sbjct: 725 SLDLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKA 782
Query: 736 YE--QESPMNYGCTVAYIK 752
+ + G T+ Y+K
Sbjct: 783 HRLGEYGEGGNGVTIVYLK 801
>gi|291530786|emb|CBK96371.1| MutS2 family protein [Eubacterium siraeum 70/3]
Length = 793
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 341/711 (47%), Gaps = 99/711 (13%)
Query: 46 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 154
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 454
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 455 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 514
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 515 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 570
KE Q V+ + + + Q D ++++ E + + + +K + S I++ V A
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHISSSVNAMY 621
Query: 571 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 688 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|417962044|ref|ZP_12604329.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
gi|380331334|gb|EIA22399.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
Length = 706
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 351/739 (47%), Gaps = 126/739 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +
Sbjct: 64 ISDFASDNLFKIRKELKSKTASIKRKLSEILKTYSKY--LQENVFTVRGDRYCIPVKSEY 121
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 122 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 180
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I + + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 181 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 229
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ DV VP+++ + + ++ITGPNTGGKT
Sbjct: 230 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 259
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ +
Sbjct: 260 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 319
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ + ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 320 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 379
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 380 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY------------ 427
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQ 519
L E+ K ES +T E + REIE +E K L D+ L+ E +
Sbjct: 428 -------LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKE 480
Query: 520 QVQ----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAI 565
+++ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 481 KLRIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI 533
Query: 566 VEAHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ D ++E N+S F +F G +K +G + ++E P VLVQ
Sbjct: 534 --KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQA 590
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V NI + + + + ++ K + D + R T
Sbjct: 591 GVLKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTIST 629
Query: 680 SLDLRGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
SLDLRGM + E LD A + + +IHG GTGV+K + +LRNH V
Sbjct: 630 SLDLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKA 687
Query: 736 YE--QESPMNYGCTVAYIK 752
+ + G T+ Y+K
Sbjct: 688 HRLGEYGEGGNGVTIVYLK 706
>gi|402310174|ref|ZP_10829142.1| MutS2 family protein [Eubacterium sp. AS15]
gi|400369416|gb|EJP22416.1| MutS2 family protein [Eubacterium sp. AS15]
Length = 785
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 217/738 (29%), Positives = 346/738 (46%), Gaps = 123/738 (16%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + +++ + L ++ A + ++T R R + +K+ +
Sbjct: 142 ISDDASTELRRIRRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RDQFP-GIVHDTSSSGATMFIEPMAIVNMNNHLSALKQEEYREIERILAYLTSIVGEFSE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI Y + + E+D A+ + MD + P ++ +V F ++ +HPL+
Sbjct: 261 EIIYDCEMLEELDFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G +VITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL +M + GL++P F+ I ADIGD QS+ Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLLCIMLQCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
V SLVL DE+G+GTDP EG LA SIL L+++ L TTHY++L +
Sbjct: 400 NEVDENSLVLFDELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE--- 458
NA+ EF + TL PTYR++ G G SNA I++ +G + IIQRA+ + E ++ E
Sbjct: 460 TNASVEFDVNTLSPTYRLIIGIPGKSNAFEISQKLGLSKDIIQRARDTIHTESIKVEDVI 519
Query: 459 ----RQQHRKSELYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREI 499
+ ++ E Q L +E R KLE++ R A +I++ L E
Sbjct: 520 TKLDKIKNEYEEKKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEA 579
Query: 500 EDEAKDLDRRAAHL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 558
++EA ++++ L K+ + + + +++N K +I+T +D A + L+K +
Sbjct: 580 KNEADEINKVLNKLKKSSDYKNIDKKMNEIKGRINT--------FKDKYAKKKEELVKSN 631
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E +P ++ V G+ V+V S A V+ V + V+VQ
Sbjct: 632 E----------KPIENVGV------------GDIVYVNSFAQN-AKVLSVDDKKNEVVVQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +++ +KK NI L K+ D +S +G + Q +
Sbjct: 669 LGAIKMTLKKENI----------------SLEKKDNDTKSSKSGK-----IMKSKAQGAT 707
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+DLRGM +E A ++D I + L +IHG+GT V+K+ V L+ H + Y
Sbjct: 708 TSVDLRGMDLETALMEVDKYIDDSYLAGLEQLTIIHGVGTLVLKKGVQSYLKKHKHIKNY 767
Query: 737 E--QESPMNYGCTVAYIK 752
Q G T+ +K
Sbjct: 768 RDGQYGEGGMGVTIVTLK 785
>gi|429766788|ref|ZP_19299030.1| MutS2 family protein [Clostridium celatum DSM 1785]
gi|429182934|gb|EKY24010.1| MutS2 family protein [Clostridium celatum DSM 1785]
Length = 785
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 209/702 (29%), Positives = 341/702 (48%), Gaps = 88/702 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS L IR R+++ +S +++ I +A + L T R R + +KA
Sbjct: 145 ISDKASGTLYNIR----RSLKEKNSSVREKINSIVRANSKYLQDSLYTMRGDRYVIPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE ILS L++++ +
Sbjct: 201 EYKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSELSSKVYNN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ + + E+D FA+ +A ++ + P + D S +I G KHPL+
Sbjct: 260 IDVVTSNSNILKELDFIFAKGKYASSLNAILP------KIRNDKSFDIIGGKHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
VP D+ + E ++ITGPNTGGK
Sbjct: 310 -------------------------------DQKIVVPSDVYLGDEFTTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL LM+ +GL +PAK+ + ++ I ADIGD QS+EQ+LSTFSGH++ IV
Sbjct: 339 TVTLKTVGLLHLMALSGLLIPAKDGSSVGFYKEIFADIGDEQSIEQSLSTFSGHMTNIVT 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
IL+ +SLVL DE+GSGTDP+EG ALA +I++ LRDR + TTHY++L +
Sbjct: 399 ILDDADGDSLVLFDELGSGTDPAEGSALAIAIIETLRDRGARIIATTHYSELKGYALRTI 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 458
ENA+ EF +ETLRPTYR+L G G SNA I++ +G +I++A+ + E L+ E
Sbjct: 459 GVENASVEFDVETLRPTYRLLIGIPGKSNAFEISRRLGLSNDVIEKAKNSMSKENLQFED 518
Query: 459 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
R KS L E +KL +A + + E ++ +I D+A + A L+AK
Sbjct: 519 LIRDLQEKSILANRDAREAKKLRDEAENLKNKYNEKINKLDKIRDKAYE----EARLEAK 574
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ AK + D +V+ + A+ + +++ + A +E +
Sbjct: 575 NI------ISKAKDEADEIVKAMRELEKMGIAEGGRNRLEQERQKLKASLEEKEAAMIKT 628
Query: 577 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
Q G + + SL ++ +V P + V V+ G M++ VK ++R
Sbjct: 629 RENQGEIIKKVQLGMEAFLPSLNQRV-IIVSNPDNKGEVQVEAGIMKINVKLKDLRK--- 684
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
++ +++ + +DLRGM EEA ++ D
Sbjct: 685 -------------------VNEEPKKKEKKKREVKLNLKSVDSRIDLRGMDSEEACYRTD 725
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L A + + ++HG GTG++++ + ++L+ HP V Y
Sbjct: 726 KYLDEAYMSNLGEVTIVHGKGTGILRKAINDMLKRHPHVKSY 767
>gi|429204941|ref|ZP_19196222.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146803|gb|EKW99038.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 217/697 (31%), Positives = 337/697 (48%), Gaps = 129/697 (18%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + ++ ++ G+ + S+SG T F+EPK VE NN R ++E E
Sbjct: 188 IVTIRNDRYVIPVRQEYRNKF-GGVVHDQSASGQTVFVEPKAIVELNNRLKRQQSAEREE 246
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+A IA E++ + ++D A+A +A + PI+ + D++
Sbjct: 247 VKRILAELSALIAPYTEELQANAHIIGQLDFVNAKARYAHAIKATEPIIDT------DNN 300
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+ + + HPLL+ P K+ V N DI +
Sbjct: 301 VYLRQVWHPLLV---------------PQKA-VRN-------------------DIMLGK 325
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ + ++ITGPNTGGKT ++KTLGL +M ++GL++PA R+ F I ADIGD QS+E
Sbjct: 326 DYQAIIITGPNTGGKTITLKTLGLVQMMGQSGLFIPAYEESRIGIFTDIFADIGDEQSIE 385
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
QNLSTFS H+ IV+IL+ + SLVL DE+G+GTDP EG +LA +IL + V
Sbjct: 386 QNLSTFSSHMVNIVNILQHIDAHSLVLFDELGAGTDPQEGASLAIAILDAVGATGAYVVA 445
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY +L + NA+ EF +ETL+PTYR+L G G SNA NI++ +G D II
Sbjct: 446 TTHYPELKAYGFERPGTINASMEFDVETLQPTYRLLLGIPGRSNAFNISRRLGLDETIIA 505
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREI 499
AQ+L + + + L+ +R + E +A A LH ++ Y ++
Sbjct: 506 AAQELT-----TQDSQDLNAMITDLVAKRHQAEEEAIALQKHLEEAEKLHHDLAQAYEKL 560
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDAS 547
E L +A +KA + QV Q+ + D ++ D ENQL DA
Sbjct: 561 VAERSHLTEQAK-MKANDIVQVAQK------KADAIINDLRAMRLNGAATVKENQLIDAQ 613
Query: 548 ADEINSL---IKESESAI---AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSLGD 600
++NSL I+ + + A +A P+DD V +G+Q V ++ LGD
Sbjct: 614 T-QLNSLHQDIRLQHNKVLRKAKEKQALHPNDDVLVRS---------YGQQGVLIQKLGD 663
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K VQ G +++++ ++++ I ++K PR SG
Sbjct: 664 KQWE------------VQLGILKMKIDEDDLEKIHVQEKKQ-----PR---------SGV 697
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 718
S +AS+ +SLDLRG R EEA +D I A + ++HG GTG
Sbjct: 698 VLRS-AQASH------VSSSLDLRGQRYEEALTNIDRYIDAALLAGYKQVTIVHGKGTGA 750
Query: 719 VKERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 752
++ + + L N+ V K+ Q +P N G T+ Y K
Sbjct: 751 LRSGITKYLENNRSVKKF-QFAPPNAGGNGATIVYFK 786
>gi|342732204|ref|YP_004771043.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455611|ref|YP_005668206.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960547|ref|ZP_12603130.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|417964504|ref|ZP_12606221.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968357|ref|ZP_12609386.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|418372458|ref|ZP_12964550.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329659|dbj|BAK56301.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|346983954|dbj|BAK79630.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330812|gb|EIA21980.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|380339872|gb|EIA28540.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|380341143|gb|EIA29642.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|380342127|gb|EIA30572.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 783
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 351/739 (47%), Gaps = 126/739 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +
Sbjct: 141 ISDFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEY 198
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 199 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 257
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I + + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 258 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 306
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ DV VP+++ + + ++ITGPNTGGKT
Sbjct: 307 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 336
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ +
Sbjct: 337 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 396
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ + ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 397 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 456
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 457 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY------------ 504
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQ 519
L E+ K ES +T E + REIE +E K L D+ L+ E +
Sbjct: 505 -------LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKE 557
Query: 520 QVQ----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAI 565
+++ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 558 KLRIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI 610
Query: 566 VEAHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ D ++E N+S F +F G +K +G + ++E P VLVQ
Sbjct: 611 --KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQA 667
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++ V NI + + + + ++ K + D + R T
Sbjct: 668 GVLKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTIST 706
Query: 680 SLDLRGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
SLDLRGM + E LD A + + +IHG GTGV+K + +LRNH V
Sbjct: 707 SLDLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKA 764
Query: 736 YE--QESPMNYGCTVAYIK 752
+ + G T+ Y+K
Sbjct: 765 HRLGEYGEGGNGVTIVYLK 783
>gi|404369300|ref|ZP_10974641.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
gi|313690687|gb|EFS27522.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
Length = 778
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 227/772 (29%), Positives = 375/772 (48%), Gaps = 132/772 (17%)
Query: 10 FHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL--- 66
++Y L + + L +E+ I ID I D AS DL IR +K N+
Sbjct: 110 LNKYKDLRDKFNDVPILRGIEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIKRK 168
Query: 67 -DSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
D L + A++FQ + +IT+R R V +KA K + GI + SSSG T F+
Sbjct: 169 FDELFNEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTVFI 222
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP V NN L E E IL +T I S+ +I + + V+ +D+ ARA +
Sbjct: 223 EPLSIVALNNKNRELEIKEKEEIRKILLRITDYIRNSKDDIDRVGEAVITLDILNARAMY 282
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
V P ++++ ++ + +HP + SS+
Sbjct: 283 GIEKKCVVPNINNREILTLVDA------RHPFIPVSSV---------------------- 314
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
VP+ ++ + ++ITGPNTGGKT ++KT GL +LM+ +G+ +PA
Sbjct: 315 -------------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPAH 361
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
H + +F + ADIGD QS+EQ+LS+FS H+ + +ILE V+R SLVL+DE+GSGTDP+
Sbjct: 362 EHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTRASLVLLDELGSGTDPA 421
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG A A +++ YL+D+ +++TTHY+++ + E A+ EF++ETL PTYR+L G
Sbjct: 422 EGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLLIG 481
Query: 425 STGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE-LY 468
G+SNAL IA+ +G ++I +A +K++ ++ + + R+ E L
Sbjct: 482 IPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDIMKRQVEFLK 541
Query: 469 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQQE 524
++ ++ E + R L E D+ +E ++A K++ +AA L +++Q+E
Sbjct: 542 EAAQRDKEAFEEKLRV---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQKE 594
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
N K I V + N LR A D+ + E + DF V
Sbjct: 595 DN-KKEDIKNVQKSL-NMLRSALQDDKTKTVAEKPKVARKV--------DFKV------- 637
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 644
GE++ V SL ++ A V+++ +TV VQ G +++ V ++++ + K+K N
Sbjct: 638 -----GERLFVNSL-NQFANVLKINLSKETVQVQAGILKLEVSLDDVKVVEEKKQK-VYN 690
Query: 645 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 702
S+ + ++ +DLRG V+EA ++L+ L A
Sbjct: 691 ------------------------SFSHKKTAVRSEIDLRGKMVDEAVYELETYLDRAVM 726
Query: 703 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
S + ++VIHG GTG ++E +L L+ P V +Y GCTV +K
Sbjct: 727 NSYNEVYVIHGKGTGALREGILNYLKKCPYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|154482859|ref|ZP_02025307.1| hypothetical protein EUBVEN_00555 [Eubacterium ventriosum ATCC
27560]
gi|149736287|gb|EDM52173.1| MutS2 family protein [Eubacterium ventriosum ATCC 27560]
Length = 800
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 222/723 (30%), Positives = 343/723 (47%), Gaps = 94/723 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
LT L+ I CI + I D AS +L+ IR + K R L SL+ + +
Sbjct: 138 LTNLKNDIERCIISEDEIA-DDASANLKNIRRQMKITNDRVHSQLSSLINSQSGHTY--- 193
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ LIT R R CV +K ++ + +GI + SS+G+T F+EP VE NN L
Sbjct: 194 -LQDALITMRDGRYCVPVKQEYRGNV-NGIIHDQSSTGSTLFIEPAAVVELNNKLRELEG 251
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ L+ A+ E+K M + ++D FA+A A+ M P + Q
Sbjct: 252 KEADEIQIILANLSMACAEHIYELKTDMKILPKLDFIFAKASLAKEMKASMPEFNDQRQ- 310
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
INI+ +HPLL +P K VPID
Sbjct: 311 -----INIKKGRHPLL---------------DPKKV--------------------VPID 330
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + ++++TGPNTGGKT S+KT+GL +LM +AGL++PA +L F + ADIGD
Sbjct: 331 IHLGKDFNLLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPAFEGSKLAVFKEVFADIGD 390
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ V+IL ++SLVL DE+G+GTDP EG AL SIL +L++
Sbjct: 391 EQSIEQSLSTFSAHMVNTVNILNQADQDSLVLFDELGAGTDPVEGAALGISILTFLKNIG 450
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY++L +NA+ EF +ETLRPTYR+L G G SNA I+ +G
Sbjct: 451 SRIMATTHYSELKLFALSTEGVQNASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLP 510
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II+ A+ ++ + +Q ++ + +R ++E T A ++I L R+ E
Sbjct: 511 DYIIEDAKSHID---SDNEQFE--DVLSEIERQRIQIEKDQETIAVYKSQIKSLKRDYEL 565
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + L+ + + K ++ L AK D ++ + + E +++S S
Sbjct: 566 KTEKLNEQRDKILNKAREEAVDILKEAKETADEAIKTINKYGKSGNTRE----MEKSRSN 621
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-ATVVEVPGDDDTVLVQYG 620
+ A ++ ++ ++ + F VK L L TV +P + V+ G
Sbjct: 622 VGAKLKKNQVGSSIKAAKPKKAYKPSDFKLGTGVKVLSMNLNGTVASLPNAAGNLTVKMG 681
Query: 621 KMRVRVKKNNIRPI-----PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
+ +V NIR + P+ K AP L + GS G S + +
Sbjct: 682 ILNSKV---NIRDLEIIDEPDIK-------APGLTR-------GSTGKIKMNKSMNIKTE 724
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
++L G V+EA QLD L A ++VIHG GTG ++ V +NH +
Sbjct: 725 -----INLIGKTVDEAISQLDKYLDDAYIAHLPQVYVIHGKGTGALRNAV----QNHLKK 775
Query: 734 AKY 736
Y
Sbjct: 776 CSY 778
>gi|269798126|ref|YP_003312026.1| MutS2 family protein [Veillonella parvula DSM 2008]
gi|269094755|gb|ACZ24746.1| MutS2 family protein [Veillonella parvula DSM 2008]
Length = 792
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 334/701 (47%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQEAIITQRNNRYVIPVKQEY 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L VV+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMVVSTHYNELKNYAYHT 455
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R E + ++E E K + + + +K
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILSKAQAD 571
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ + Q + + D S I + I+++ P DD S T
Sbjct: 572 AESMKRSLRVEGEAIIKQLKTQFSETNKDRRQSAINAARMGISSVHVPEAPVDDERKSLT 631
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 632 ADA---IKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA +
Sbjct: 688 AREQKAVMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEAIVSVGRF 734
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|225571366|ref|ZP_03780362.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
gi|225159842|gb|EEG72461.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
Length = 791
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 320/672 (47%), Gaps = 105/672 (15%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +KA H+ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEHRGHV-QGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+AE A+ + I+ + E+D FA+ A M+ P+ +++
Sbjct: 245 EIQVILARLSAETAEHIQTIRTNCTVLTELDFIFAKGSLALDMNASMPLFNTEGR----- 299
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL + TV VPI I +
Sbjct: 300 -IHIREGRHPLL------------------------DKHTV-----------VPITITLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DTFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELSVFHDVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SL+L DE+G+GTDP+EG ALA SIL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDEHSLILFDELGAGTDPTEGAALAISILNHLHERGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALTTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPSYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DE 502
+ A+ R + E ++ L+ + LE+ RT AEI RE+E DE
Sbjct: 504 EEAK---------RHLSEQDESFEDLLAD---LEANRRTIEKEQAEIASYRRELERLKDE 551
Query: 503 A----KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--ASAD---EINS 553
A K LD + + + ++ L AK D +++F ++ ++AD E
Sbjct: 552 ASQKQKKLDEQKERILREANEKAHAILAEAKDVADETMRNFHKFGKENISAADMERERER 611
Query: 554 LIKESESAIAAI-------VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
L K+ S + + + H+P D + GE V V S+ + TV
Sbjct: 612 LRKKMASTASGMDRQVKKPQKQHKPGD-------------FKLGESVKVLSM-NLTGTVN 657
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
+P V VQ G +R +V +++ I AP +Q + +S
Sbjct: 658 SLPDAKGNVTVQMGILRSQVNISDLEII---------EEAPSYSAKQLHK------TSKG 702
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 724
+ G S ++L G V+EA +LD L A S + V+HG GTG ++ +
Sbjct: 703 KMKMGKSFSVSAE-INLLGKTVDEAVAELDKYLDDASLAHLSSVRVVHGKGTGALRTGIH 761
Query: 725 EILRNHPRVAKY 736
L+ RV Y
Sbjct: 762 NYLKRQKRVKSY 773
>gi|427414052|ref|ZP_18904242.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425714832|gb|EKU77834.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 791
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 229/770 (29%), Positives = 364/770 (47%), Gaps = 107/770 (13%)
Query: 9 IFH-RYS--PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME 64
FH +Y+ PLL L +++ LE K D K ++D AS L+ +R+ R E
Sbjct: 103 FFHNKYAHYPLLSLWIQDMPRHDGLERKFERVFDKKG-NLMDSASPKLQHLRSTIVRTKE 161
Query: 65 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
+ S L+ + + ++T+R +R + +K ++Y +G+ + S++GAT ++
Sbjct: 162 RIKSDLQAIMHDPNNQKYFQEAIVTQRNNRYVIPVKQEYRYAF-EGLIHDRSATGATLYI 220
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP V NN +E E I L+ + K + +RV ++ + +A
Sbjct: 221 EPMRLVNLNNDLQEAELAEEEEVRRIYRELSQAVRKDSNTLMDACERVSHVEFVYGKANL 280
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
A M GV LS V ++ +HPL+ P+
Sbjct: 281 AIKMKGVPAELSGGREVKLLNA------RHPLI----------------PV--------- 309
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
+ VP I + R+++ITG NTGGKT +MKTLGL SLM++AGL++PA
Sbjct: 310 ----------NVVVPTTITLGTNYRILLITGSNTGGKTVAMKTLGLLSLMNQAGLFIPAD 359
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
LP F+ I ADIGD QS+E +LSTFS H++++V IL++ + LVL+DE+GSGTDP
Sbjct: 360 TGSILPIFNNIYADIGDEQSIEASLSTFSAHMTQVVKILKVAGAKDLVLLDELGSGTDPE 419
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA ++L+Y R R L +V+THY +L EN EF TLRPTYR+ G
Sbjct: 420 EGSALAVALLEYFRKRGPLMMVSTHYNELKRYAYHTDGIENGHVEFDERTLRPTYRLHIG 479
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS-LMEERRKLESQAR 483
G S+AL+IA +G R++I A++ E +R E S L E+ RK + + R
Sbjct: 480 VAGSSHALSIAARLGVPREVIDYAKQA-----HEGSANRDMETVLSDLNEQLRKNQERER 534
Query: 484 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
E + + E E K L+ R + AK + QQ +V+ + ++++ ++Q
Sbjct: 535 ILKKELDEARRMRTQAEREKKQLNERRKQILAKAQNEAQQLKQSIRVEGEQIIKELKSQF 594
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKS 597
+A D+ + I ++ I+ + +V E TP + G+ V V S
Sbjct: 595 SEADKDKRQNAITKARKDISGV----------NVPELERDERTPVNVKELKEGQTVFVVS 644
Query: 598 LGDKLATVVEVPGDDDTVLVQYGKMRV---------RVKKNNIRPIPNSKRKNAANPAPR 648
L + + TV V G V V V R + NN+R +++ A P PR
Sbjct: 645 L-NAVGTVTAVQGKRIQVAVNGLTANVKAADLAVASREETNNLR-----RKETAVQPKPR 698
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWES 704
R + GS+ E R + + L++ G V+EA SH +D AL
Sbjct: 699 KR---------AGGSAVE------RQKHATTELNVIGQTVDEANQNVSHFIDQALMA--G 741
Query: 705 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
S + ++HG GTG ++ + + L+ P +++YE G T+ Y+K
Sbjct: 742 ISPVRIVHGKGTGALRAGIHQYLKTLPHISRYEIAGYDEGGAGATLVYLK 791
>gi|402816098|ref|ZP_10865689.1| protein MutS2 [Paenibacillus alvei DSM 29]
gi|402506002|gb|EJW16526.1| protein MutS2 [Paenibacillus alvei DSM 29]
Length = 787
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/771 (30%), Positives = 380/771 (49%), Gaps = 135/771 (17%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLK 71
++EL + ++ ELE++I CID + + LD+AS +L R E + R E L+S+++
Sbjct: 118 MMELADSLSWQKELEDEIRRCIDEQGEV-LDQASSELAAARRELRIGEARIREKLESMIR 176
Query: 72 KV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A+++ Q + LIT R R + +K+ ++ GI + SSSGAT F+EP+ V
Sbjct: 177 SSNASKMLQ-----EQLITIRNDRYVIPVKSEYRGHY-GGIVHDQSSSGATLFIEPEAIV 230
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM---DRVLEIDLAFARAGFAQW 187
NN +L +++ EE I +L+ ++ L+ D + ++D FA+A A
Sbjct: 231 TLNN---KLRETKLKEEREIERILSQLTEHVGLQVDLLLNDTDIMEQLDFIFAKARLAHE 287
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
M P ++ + ++ I+G +HPL+ D E
Sbjct: 288 MKATLPRMNDRGYMKL-----IKG-RHPLI--------------------DREKV----- 316
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPID+++ + +++TGPNTGGKT S+KT+GL SLMS +GL++PA++
Sbjct: 317 ----------VPIDVELGNDYTSIIVTGPNTGGKTVSLKTMGLLSLMSMSGLFIPAQDGS 366
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG
Sbjct: 367 QMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIRILGEMTPKSLVLLDELGAGTDPAEGS 426
Query: 368 ALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA +IL+++ R+G +V TTHY++L + NA+ EF ++TLRPTYR+L G
Sbjct: 427 ALAIAILEHIH-RLGCRIVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVGVP 485
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER----------- 475
G SNA IA+ +G II+ A+ V + R + SL E R
Sbjct: 486 GRSNAFAIAERLGLPSSIIEHARGEV-----TEEDMRIETMIASLEENRLRAEAEREEAE 540
Query: 476 --RKLESQARTA-----ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 528
RK R A LHAE +EA+++ R+A H E + EL
Sbjct: 541 RIRKETEHLRAVLASEEAKLHAERDKRIERASEEAREIVRKARH----EADDIITELKLL 596
Query: 529 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 588
+ V + + R DE K + A A +A + +
Sbjct: 597 AQEGVNVKEHLLTEARK-RLDEAAPASKLASKAKPAKKQARK----------------IE 639
Query: 589 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
G+ V V SL K +VVE+ G++ +VQ G M+++V +++ + +S K ++
Sbjct: 640 AGDDVMVYSLNQK-GSVVELAGNE--AVVQLGIMKMKVPMDDLELVTSSASKQSSKSV-- 694
Query: 649 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 706
G++ + R ++ LDLRG +EEA ++D L A +
Sbjct: 695 -----------KTGTNVKRT----RADNVRSELDLRGANLEEAIIEVDRFLDEALLANLG 739
Query: 707 VLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCTVAYIK 752
+++IHG GTG+++ + E LR H V + NY G TVA +K
Sbjct: 740 QVYIIHGKGTGILRTGIQEFLRKHKHVKTFRLG---NYGEGGTGITVAELK 787
>gi|452990484|emb|CCQ98332.1| MutS2 protein [Clostridium ultunense Esp]
Length = 829
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 232/754 (30%), Positives = 374/754 (49%), Gaps = 113/754 (14%)
Query: 1 MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 60
+ ++E I Y+ +E LKN LE KI ID + +LD AS L IRAE K
Sbjct: 152 LADKESLPILKEYAERIEGLKN------LETKIHGTID-EYGEVLDGASPLLRKIRAEIK 204
Query: 61 R----NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 116
E LD ++K + Q I + ++T R R + +K ++ G+ + S
Sbjct: 205 GLESGIKERLDRMVKDPSYQKM----IQEQIVTLRNGRYVIPVKQEYRTAF-GGLVHDQS 259
Query: 117 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVL 173
+SGAT F+EP+ V NN L ++++ EE I L LT A+ + ++ +
Sbjct: 260 ASGATLFIEPEAVVRLNN---ELRDAKLKEEKEIERILRELTHTTAEEADALSVNVESLA 316
Query: 174 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 233
E+D F +A +A + PIL + + + +HPL+ +
Sbjct: 317 ELDFIFTKAKYALSIKASRPILKRKKAIKLKKA------RHPLIPKEKV----------- 359
Query: 234 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 293
VPID++V ++VITGPNTGGKT ++KT+GL +L
Sbjct: 360 ------------------------VPIDVEVGDSFTMLVITGPNTGGKTVTLKTIGLMTL 395
Query: 294 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 353
M++AGL +PA + F + ADIGD QS+EQ+LSTFS H++ IV I+E ++ +SL+L
Sbjct: 396 MAQAGLQIPAGEGSEVAVFSQVFADIGDEQSIEQSLSTFSSHMTHIVKIIEEMTPDSLIL 455
Query: 354 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 413
+DE+G+GTDP+EG ALA +IL+ L R V TTHY++L NA+ EF +E
Sbjct: 456 LDELGAGTDPTEGAALAIAILEELYRRDARVVATTHYSELKVYAYNHPGVMNASVEFDVE 515
Query: 414 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 473
TL PTYR+L G G SNA IA+ +G ++II +A+ V+ E +Q + +L E
Sbjct: 516 TLSPTYRLLLGIPGRSNAFLIAERLGLPKEIIDKARGQVDEESRELEQ-----MITNLAE 570
Query: 474 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
R++ E + A + E++ L +++E + L+R L + ++ ++ + A+ + +
Sbjct: 571 SRKEAEMKREEAERIQEEMVRLRNSLQEEKERLERERDRLLREAAREAEEVVKKARREAE 630
Query: 534 TVVQDFENQLRDASADEINSLIKESESAIAAIVEA-HRPDDDFSVSETN--------TSS 584
V+Q+ +E + IKE ++EA R D+ + ET +S
Sbjct: 631 EVIQELRRL-----GEEEGARIKEHR-----LIEAKKRLDEAIPILETGRRERGDVPSSP 680
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 644
+ G++V+V SL K V+E G+D+ LVQ G ++ ++ ++
Sbjct: 681 HGLKAGDEVYVHSLKLK-GIVLEALGEDE-YLVQVGILKTKLNGRDL------------- 725
Query: 645 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 702
+++E+ ++ + A+ RV+T LDLRG VEEA LD L A
Sbjct: 726 ------EKREEEKTRHEKAVIRTANRRERVRT---ELDLRGQTVEEALIHLDRYLDEALL 776
Query: 703 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +IHG+GTG +K V + LR+H V +Y
Sbjct: 777 AGLHQVTIIHGLGTGALKRAVQDYLRSHRNVERY 810
>gi|402300947|ref|ZP_10820382.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
gi|401723934|gb|EJS97346.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
Length = 785
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 208/731 (28%), Positives = 357/731 (48%), Gaps = 83/731 (11%)
Query: 20 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 79
++ N LT++E +I CID + LD AS+ L IR + + ++ S L+++
Sbjct: 123 VEQINPLTDVEREIKQCIDDNGHV-LDSASQTLRTIRQQVRSYESSVRSKLEQMTRSSST 181
Query: 80 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 139
+ +IT R R + +K ++ GI + S+SG T F+EP+ V NN
Sbjct: 182 QKMLSDAIITIRNDRFVIPVKQEYRGSF-GGIVHDQSASGQTLFIEPQVVVTLNNQLREA 240
Query: 140 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E E IL+ L+ ++A+ E+ + + +DL A+A +A + P ++
Sbjct: 241 KVKETREIDRILAELSRQVAEVTDELLTNISTLAVLDLIIAKAHYANAIKATSPEINEAG 300
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
HV + +HPL+ + VP
Sbjct: 301 HVLLKKA------RHPLIDAGEV-----------------------------------VP 319
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
IDI++ E R ++ITGPNTGGKT ++KT+GL +LM ++GL++P + ++ + + ADI
Sbjct: 320 IDIELGGEFRSLIITGPNTGGKTVTLKTVGLLTLMMQSGLHVPVEEESKMAVYKQVFADI 379
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQ+LSTFS H++ IV IL+ V +SLVL DE+G+GTDP+EG ALA +IL +
Sbjct: 380 GDEQSIEQSLSTFSSHMTNIVQILDKVDFQSLVLFDELGAGTDPTEGAALAIAILDDVYK 439
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
R V TTHY++L NA+ EF +++L+PTYR+L G G SNA I++ +G
Sbjct: 440 RGAAVVATTHYSELKGYAYNREGVMNASVEFDVQSLKPTYRLLIGVPGRSNAFAISRRLG 499
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
II RA+ + + ++ + SL E ++ +++ A ++ E L+R++
Sbjct: 500 LGEAIIDRAKDQI-----DSDSNKVENMIVSLEESKKSADAEQIEAKNIRFEAEKLHRDL 554
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
+ + ++L R + + ++ + + AK + + ++++ + A + + +I +
Sbjct: 555 QKQMEELQREKELILKQAEEEAEVAVAKAKEEAEFIIRELREMQKKGLAVKEHEIIDAKK 614
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A + + P G++V V S G K + + +V +D LVQ
Sbjct: 615 HLEEAAPKLTPKQKKIKKQAQQAKTLHP--GDEVKVLSFGQKGSIIEKV--NDKEYLVQI 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G M+++V ++++ I +SK P +R E+ P
Sbjct: 671 GIMKMKVALDDLQFIESSK-PVETKPLTTVR--------------GNESHVKP------- 708
Query: 680 SLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
LDLRG R E A ++ D LA + S S +IHG GTG +++ V ++L+ HP V
Sbjct: 709 ELDLRGERYENAMLKVEKYIDDALLAGYHSVS---IIHGKGTGALRKGVKDLLKRHPHV- 764
Query: 735 KYEQESPMNYG 745
K +++ MN G
Sbjct: 765 KAARDAAMNEG 775
>gi|375091463|ref|ZP_09737753.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
gi|374563326|gb|EHR34645.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
Length = 785
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 213/713 (29%), Positives = 344/713 (48%), Gaps = 108/713 (15%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS+ L IR + E L+SL+K + Q G IT R R V +
Sbjct: 143 IADDASKTLFNIRKSIREKTEEARKKLNSLVKDDTTNL-QDG-----FITMRDGRYVVPV 196
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K K +P GI +VSSSG T ++EP VE NN L E E IL L+ I
Sbjct: 197 KTGAKSKVP-GITHDVSSSGQTLYIEPMVIVEINNKIRDLEIEEYEEIRKILKDLSEMIF 255
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
EI+ ++++D FA+A +A PIL+ + I+I+ KHPLL G
Sbjct: 256 NYHEEIENNQYLLVDLDFTFAKAKYALEKGHTKPILNDEK------IIDIKNAKHPLLKG 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
VPID+K+ +VITGPNTG
Sbjct: 310 K------------------------------------IVPIDVKIGENYNALVITGPNTG 333
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL M++AGL++P ++ F+ + ADIGD+QS+EQ+LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLVVFMAQAGLFVPCDEFSKVAVFNDVFADIGDNQSIEQSLSTFSASMTNI 393
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V+IL + +SLVL DE+G+GTDP+EG ALA +I+ L R + + TTHY++L
Sbjct: 394 VNILNKANDKSLVLFDELGNGTDPTEGAALAMAIIDTLVKRESILLSTTHYSELKLYAMS 453
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+NA EF +ETL PTY++ G G SNA I++ +G I+ A++ + +
Sbjct: 454 TEGVQNANVEFDIETLSPTYKLTIGRPGKSNAFEISRRLGLFEDILFDAKQYISK----- 508
Query: 460 QQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
++R E + + +++ +L++Q + ++ E + + I+D D+ +R
Sbjct: 509 -ENRDFEDIIAEIEDDKSRLDNQ---LSEVNKEKLRYQKLIDDFNNDVGKRR-------- 556
Query: 519 QQVQQELNFAKVQIDTVVQDFENQ----LRDASADEINSLIKESESAIAAIVEAHRPDDD 574
++ ++++ AK + ++ D +N+ LR A + + S ++ + A + I E ++ ++
Sbjct: 557 EKAEKDIEKAKEEAKKILYDAKNKSKELLRIAKSQKGRSESRDIDRAYSEINEKYKEENK 616
Query: 575 F-----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
+ N + GE V V S+G +L V +P + V VQ G ++ V
Sbjct: 617 RYETKPKQTRKNNKIIDVKLGETVKVLSMGGELGVVQTLPDNKGEVTVQMGILKFTV--- 673
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
NIR L K Q + + + SS ++ ++ +K LD+RG+ VE
Sbjct: 674 NIRD---------------LEKTQSEIEKEKSKSSYKQVMRNTAMKQAKQELDVRGLNVE 718
Query: 690 EASHQLDIALACWESRSVLF------VIHGMGTGVVKERVLEILRNHPRVAKY 736
EA I + + S+LF +IHG GTG ++ + + R V ++
Sbjct: 719 EAI----IEIEKFFDDSILFGLKRVEIIHGKGTGALRAGLTDFFRKSKYVDEF 767
>gi|347727052|gb|AEP19884.1| recombination inhibitory protein [Exiguobacterium sp. 11-28]
Length = 784
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/745 (30%), Positives = 352/745 (47%), Gaps = 120/745 (16%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----L 66
R L E + L E+E+ I ID + + D AS+ L +R + R+ E +
Sbjct: 116 RIPRLDEYAERLTKLIEVEQSIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRI 173
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
D++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP
Sbjct: 174 DNILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAF-GGIVHDQSASGQTLFIEP 226
Query: 127 KGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
+ V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 227 QAIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVADSVVINLDVLATLDFVFAKVAY 284
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
+ P L+ + + + +HP + P
Sbjct: 285 GHQLKATEPKLNDEREIKLKQA------RHPFI----------------P---------- 312
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 ---------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAE 363
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP
Sbjct: 364 FGTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQ 423
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 424 EGAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLME 473
G SNA I++ +G ++I +A + ++ L E +HR +L + L+
Sbjct: 484 VPGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINEL--EAAKHRAEQLEKELIV 541
Query: 474 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
+R LE++ A+ A++ D RE D +A+ + V+Q AK Q +
Sbjct: 542 KRHDLEAE---QAAFEAKLTDFERE-------RDTMYGEAEARAEKAVEQ----AKRQAN 587
Query: 534 TVVQDFENQLRD---ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
V+ D +LR+ EI + K+ ESA + + + T S G
Sbjct: 588 EVI-DRLKKLREEGIVKEHEIIAAKKQLESAKPTLQDKKIQKVKQKAQQKRTFS----KG 642
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
E+V V + K V ++ +D+ VQ G M+V VK ++++ I SK ++ + L+
Sbjct: 643 EEVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGSSLK 700
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVL 708
+Q ++K+ LDLRG+RVEE +LD I A +
Sbjct: 701 RQ----------------------SSTKSELDLRGVRVEEGLSRLDKYIDEALVSGYDNV 738
Query: 709 FVIHGMGTGVVKERVLEILRNHPRV 733
+IHG+GTG +++ E L+ H V
Sbjct: 739 RIIHGLGTGAMRQATQEYLKGHRHV 763
>gi|118586380|ref|ZP_01543830.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
gi|118433197|gb|EAV39913.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
Length = 795
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 212/749 (28%), Positives = 371/749 (49%), Gaps = 99/749 (13%)
Query: 16 LLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
L ++L N LT+ L +++ +D + +LD ASE+L IR N+ +LL K
Sbjct: 118 LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRKNISTTQNNVRTLLVK 176
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ A + +P+I+ R + + +K+ ++ G+ + S SG T ++EP+ V+
Sbjct: 177 MTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQSGLTLYIEPQATVDL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++I E +IL ++ ++ ++K D + E+DL A+A A M+ +
Sbjct: 235 NNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDLIQAKAKLANSMNAIK 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P H++ + I+++ +HPLL S
Sbjct: 295 P------HLNDEKVIDLKNARHPLLASDS------------------------------- 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
V DI++ + ++ITGPNTGGKT +KTLGL LM++ G+++ A + + F
Sbjct: 318 -----VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQTGIFITAGSDSSIYVF 372
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+G+GTDP EG ALA +
Sbjct: 373 NNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDELGAGTDPGEGAALAMA 432
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
I++ L R L ++TTHY +L D+ NA+ EF T PTYR+L G G SNA+
Sbjct: 433 IVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSPTYRLLLGVPGQSNAI 492
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL---ESQARTAAS-- 487
I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR L E++ R S
Sbjct: 493 AISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRDLSKEENELRNQLSRA 547
Query: 488 ------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKVQIDTVVQD 538
L+ ++ + + E D +A H+ + +E++Q+ ++ +++ +
Sbjct: 548 EQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLDQIRRERLKAGSSTGK 607
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
E QL+ AD+I+ L +++ +++ + F V GE+V V S
Sbjct: 608 NEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------------GEEVMVSSY 654
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
T+++ + + VQ G +++ V +N++ + + K P R++ + + +
Sbjct: 655 HQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKINEPVHRVKNTRVFKTA 712
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 716
S + +DLRG R E+A LD I A + + +IHG GT
Sbjct: 713 SKNISGH---------------IDLRGERYEQAMIDLDRYIDQAMLNNIDTIEIIHGKGT 757
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMNYG 745
G +++ V ++LR+ R+ Y+ +P G
Sbjct: 758 GALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|290889939|ref|ZP_06553025.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|419757832|ref|ZP_14284157.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|419857503|ref|ZP_14380209.1| MutS family ATPase [Oenococcus oeni AWRIB202]
gi|421184273|ref|ZP_15641697.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|421186067|ref|ZP_15643462.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|421187983|ref|ZP_15645324.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|421190064|ref|ZP_15647368.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|421192044|ref|ZP_15649313.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|421193207|ref|ZP_15650458.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|421194500|ref|ZP_15651720.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|421197349|ref|ZP_15654526.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|290480381|gb|EFD89019.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|399905341|gb|EJN92784.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|399966656|gb|EJO01176.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|399967557|gb|EJO02030.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|399967711|gb|EJO02177.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|399969991|gb|EJO04297.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|399970864|gb|EJO05154.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|399973189|gb|EJO07375.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|399975577|gb|EJO09628.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|399977918|gb|EJO11889.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|410497767|gb|EKP89236.1| MutS family ATPase [Oenococcus oeni AWRIB202]
Length = 795
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 212/749 (28%), Positives = 371/749 (49%), Gaps = 99/749 (13%)
Query: 16 LLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
L ++L N LT+ L +++ +D + +LD ASE+L IR N+ +LL K
Sbjct: 118 LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRKNISTTQNNVRTLLVK 176
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ A + +P+I+ R + + +K+ ++ G+ + S SG T ++EP+ V+
Sbjct: 177 MTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQSGLTLYIEPQATVDL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++I E +IL ++ ++ ++K D + E+DL A+A A M+ +
Sbjct: 235 NNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDLIQAKAKLANSMNAIK 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P H++ + I+++ +HPLL S
Sbjct: 295 P------HLNDEKVIDLKNARHPLLASDS------------------------------- 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
V DI++ + ++ITGPNTGGKT +KTLGL LM++ G+++ A + + F
Sbjct: 318 -----VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQTGIFITAGSDSSIYVF 372
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+G+GTDP EG ALA +
Sbjct: 373 NNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDELGAGTDPGEGAALAMA 432
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
I++ L R L ++TTHY +L D+ NA+ EF T PTYR+L G G SNA+
Sbjct: 433 IVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSPTYRLLLGVPGQSNAI 492
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL---ESQARTAAS-- 487
I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR L E++ R S
Sbjct: 493 AISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRDLSKEENELRNQLSRA 547
Query: 488 ------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKVQIDTVVQD 538
L+ ++ + + E D +A H+ + +E++Q+ ++ +++ +
Sbjct: 548 EQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLDQIRRERLKAGSSTGK 607
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
E QL+ AD+I+ L +++ +++ + F V GE+V V S
Sbjct: 608 NEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------------GEEVMVSSY 654
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
T+++ + + VQ G +++ V +N++ + + K P R++ + + +
Sbjct: 655 HQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKINEPVHRVKNTRVFKTA 712
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 716
S + +DLRG R E+A LD I A + + +IHG GT
Sbjct: 713 SKNISGH---------------IDLRGERYEQAMIDLDRYIDQAMLNNIDTIEIIHGKGT 757
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMNYG 745
G +++ V ++LR+ R+ Y+ +P G
Sbjct: 758 GALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|138896257|ref|YP_001126710.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus thermodenitrificans NG80-2]
gi|189030428|sp|A4IRL1.1|MUTS2_GEOTN RecName: Full=MutS2 protein
gi|134267770|gb|ABO67965.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
NG80-2]
Length = 784
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 222/731 (30%), Positives = 352/731 (48%), Gaps = 98/731 (13%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGID 84
LEE I ID + LD AS+ L IRA R E L+S+++ +AQ +
Sbjct: 132 LEEDIRRSIDDHGEV-LDTASDRLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLS 186
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+IT R R + +K ++ GI + S+SGAT F+EP+ VE NN E
Sbjct: 187 DAIITIRNDRYVIPVKQEYRSAY-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEK 245
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL L+A++A+ + +K ++ + D FA+A +A+ + P ++++ ++ F
Sbjct: 246 QEIERILRELSAKVAEHDEPLKRAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFL 305
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+ +HPL+ D VP DI +
Sbjct: 306 QA------RHPLI-----------------------------------DQDKAVPNDIVL 324
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +VITGPNTGGKT ++KT+GL ++M++AGL++PA + F + ADIGD QS
Sbjct: 325 GGDYTTIVITGPNTGGKTVTLKTVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQS 384
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H+ IVDIL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 385 IEQSLSTFSSHMVNIVDILRHVDEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGART 444
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
V TTHY +L NA+ EF ETLRPTY++L G G SNA +I++ +G D +I
Sbjct: 445 VATTHYPELKAYGYNRPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERI 504
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+RA +++ + H + SL +++ E A S E L E E + +
Sbjct: 505 IERA-----KVQVSAESHSVENMIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLE 559
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD-EINSLI--KESESA 561
+L+ + A A+ Q+ + A+ + + ++ + ++ A+ + + LI K+ +A
Sbjct: 560 ELEDKKAEQLAEAAQKATDIIRAAEREAERIINELRRLQKEKQAEVKEHELIAAKQRLAA 619
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+VE ++ T+ Q G++V V SL K + +V +D VQ G
Sbjct: 620 AVPVVEK------RKKTKKATARHAFQSGDEVKVTSLNQKGYLLEKV--SEDEWQVQLGI 671
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+++++ + ++ I ++ K P ++ G S L
Sbjct: 672 LKMKIHERDLEYIGSAPAKE-VTPIATVK--------------------GKDAHVSLE-L 709
Query: 682 DLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
DLRG R E+A +L D LA + S +IHG GTG +++ V + L+ H R K
Sbjct: 710 DLRGERYEDALVRLEKYIDDAVLAGYPRVS---IIHGKGTGALRQGVQQFLKQH-RAVKS 765
Query: 737 EQESPMNYGCT 747
+ N G T
Sbjct: 766 FRFGAANEGGT 776
>gi|363892244|ref|ZP_09319412.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
gi|361964194|gb|EHL17238.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 348/729 (47%), Gaps = 105/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS DL IR + +N+ + L + + + + ++T R R V +K+ +
Sbjct: 142 ISDDASVDLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 452
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 453 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 507
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 508 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 743
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGLQSYLKKHKHIKSFRDGQYGEGG 776
Query: 744 YGCTVAYIK 752
G TVA +K
Sbjct: 777 MGVTVATLK 785
>gi|313114167|ref|ZP_07799719.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623576|gb|EFQ06979.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 803
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 217/711 (30%), Positives = 344/711 (48%), Gaps = 112/711 (15%)
Query: 55 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
IRA + L+S+++ + + + + +++ R R V +K+ ++ + GI +
Sbjct: 158 IRATENSIRDRLESMVRNMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHD 212
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 174
VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y +LE
Sbjct: 213 VSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLE 272
Query: 175 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 234
ID+ A+A A + P V D S ++ +HPL+ +P
Sbjct: 273 IDVLLAKARLALDLKAFKPA------VRTDDSFSLIRARHPLI---------------DP 311
Query: 235 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 294
K VP+DI + + ++ITGPNTGGKT ++KT GL M
Sbjct: 312 KKC--------------------VPVDIALGRDYDSLIITGPNTGGKTVTLKTAGLLCAM 351
Query: 295 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 354
++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+
Sbjct: 352 AQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLL 411
Query: 355 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+ EF LET
Sbjct: 412 DELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLET 471
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 474
LRPTY++ G G SNA I++ +G ++I+ AQ Q L E
Sbjct: 472 LRPTYKLSVGVPGKSNAFLISEKLGIPERVIEAAQ-------------------QHLSAE 512
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKETQ------QVQQELNF 527
++L++ L ++ +E ++E ++L A+H L+A + + Q + EL
Sbjct: 513 DKRLDAVLGQLDDLKLQL----KESQNEVEELKNEASHQLEAAQKKRDELIRQGENELEA 568
Query: 528 AKVQIDTVVQDFENQ-------LRDASADEINSL-----------IKESESAIAAIVEAH 569
A+ + + Q E+Q LR DE S KESE H
Sbjct: 569 ARAKARALAQQVESQAYALTDELRQLQKDERMSTQQKAQRAREIAKKESEKLFIGSEAVH 628
Query: 570 RPDDDF-SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
P +F + E + G++V + L ++LATV+ +P + VLV+ G ++ +V
Sbjct: 629 NPVKEFVPLKEV-------KVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPL 680
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS-KNSLDLRGMR 687
++ K P+ + QQ R S G +N RVQ S K +L G+
Sbjct: 681 KGLK----QPEKLVKEKKPQTKAQQ--RYSRLTGDANRPNGRVERVQRSAKMECNLLGLT 734
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
V+EA ++D I A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 735 VDEALPEVDSFIDRAILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 785
>gi|229918290|ref|YP_002886936.1| MutS2 family protein [Exiguobacterium sp. AT1b]
gi|229469719|gb|ACQ71491.1| MutS2 family protein [Exiguobacterium sp. AT1b]
Length = 784
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 228/731 (31%), Positives = 344/731 (47%), Gaps = 120/731 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQA 80
L E+E+ I ID + + D AS L +R + R+ E +D++L+ A + A
Sbjct: 130 LIEVEQAIRHAIDDQG-TVQDSASPQLRGLRTQL-RSFEGSVRSRIDNILRNNAKMLSDA 187
Query: 81 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--MEVR 138
++T R R V +K ++ GI + S+SG T F+EP+ V NN EVR
Sbjct: 188 ------IVTIRNDRYVVPVKQEYRQAF-GGIVHDQSASGQTLFIEPQAIVSINNEIQEVR 240
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L E AE ILS L+ E+ I +D + E+D FA+ + Q M P L+
Sbjct: 241 LK--ERAEIERILSALSNEVGGVHDAIMTNLDVLAELDFIFAKVAYGQEMKATEPKLND- 297
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+ I ++ +HP + P D V
Sbjct: 298 -----NREIKLKQARHPFI----------------P-------------------KDEVV 317
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
PI +++ + +VITGPNTGGKT ++KT+GL LM ++GLY+PA+ L FD + AD
Sbjct: 318 PITVELGEDYTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAEFGTELSVFDAVYAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP EG ALA +IL ++
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVGMLDKIDFMSLVLFDELGAGTDPQEGAALAIAILDEVK 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
R TTHY++L NA+ EF +E+L PTYR+L G G SNA I++ +
Sbjct: 438 RRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGVPGRSNAFEISRRL 497
Query: 439 GFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
G ++I +A + ++ L +Q R +L Q L+ +R E + +
Sbjct: 498 GLSEQVIDKARSHVGSDAESVESMINELEAAKQ--RAEQLEQELIVKRHDFEEEQAEFEA 555
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-- 545
E E E +L R A K +Q AK Q + V+ D +LR+
Sbjct: 556 KMT-------EFERERDNLYRAAEAKAEKAVEQ-------AKRQANEVI-DRLKKLREQG 600
Query: 546 -ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
EI + KE ESA + E V + T GE+V V + K
Sbjct: 601 IVKEHEIIAAKKELESAKPTLQEKKIQ----KVKQKAHQKRTFSKGEEVKVTTFNQKGYI 656
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V ++ +D+ VQ G M+V VK ++++ I SK K+ + L++Q
Sbjct: 657 VKQI--NDNEYNVQVGIMKVNVKADDLQKIGPSKEKSLQSKGSSLKRQ------------ 702
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
++K+ LDLRG+RVEE +LD I A + +IHG+GTG +++
Sbjct: 703 ----------SSTKSELDLRGVRVEEGLMRLDKYIDEALVSGYDNVRIIHGLGTGAMRQA 752
Query: 723 VLEILRNHPRV 733
E L+ H V
Sbjct: 753 TQEFLKGHRHV 763
>gi|420263850|ref|ZP_14766486.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
gi|394769292|gb|EJF49155.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
Length = 787
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 156
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVD+L+ + SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKIDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 508
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 567
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 688 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 746 CTVAYI 751
A I
Sbjct: 778 GNGATI 783
>gi|257867419|ref|ZP_05647072.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257873749|ref|ZP_05653402.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
gi|257801475|gb|EEV30405.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257807913|gb|EEV36735.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
Length = 787
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 156
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + E + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKEYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 508
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 567
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 688 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 746 CTVAYI 751
A I
Sbjct: 778 GNGATI 783
>gi|261366884|ref|ZP_05979767.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282570998|gb|EFB76533.1| MutS2 family protein [Subdoligranulum variabile DSM 15176]
Length = 790
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 222/722 (30%), Positives = 344/722 (47%), Gaps = 135/722 (18%)
Query: 66 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 125
LD+++K F + +++ R R V ++A ++ + G+ +VSS+GAT F+E
Sbjct: 169 LDNIIKNSTTNKF----LQDAVVSLRNGRYVVPVRAEYRGEV-GGVIHDVSSTGATIFVE 223
Query: 126 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
P VE N ++L E E T ILS +A++ E + Y + +L+IDL A+A A
Sbjct: 224 PTAVVEANARIMQLRAQEQEEITRILSAFSAQVGSLEPQFSYSYEAMLQIDLLLAKARLA 283
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
+ P +S + + + +HPL+ +
Sbjct: 284 VEQNAFMPTVSDTVYFRLNRA------RHPLIDKKQV----------------------- 314
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
VP+DI + E +VITGPNTGGKT S+KT GL + M++ G +PA
Sbjct: 315 ------------VPVDIALGEEYDTLVITGPNTGGKTVSIKTAGLLNAMAQHGFLIPAHE 362
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
+ F L DIGD QS+EQ+LSTFSGH+ RI IL+L +L LIDE+G+GTDP+E
Sbjct: 363 SSVVCNFREYLVDIGDEQSIEQSLSTFSGHMKRISGILQLAGHGTLTLIDELGAGTDPAE 422
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G ALA SIL+ LR + L + TTHYA+L + NA+ EF++ETL PTY++ G
Sbjct: 423 GAALAVSILEQLRRQGSLLMATTHYAELKVYALETPGVVNASCEFNVETLMPTYKLSVGV 482
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
G SNA I+ +G ++II A R + + +
Sbjct: 483 PGKSNAFLISAKLGIPQEIIDAA--------------------------RNHMSNDDKRL 516
Query: 486 ASLHAEIMDLYREI---EDEAKDLDRRAAH-LKAKE------TQQVQQELNFAKVQIDTV 535
S+ A++ DL ++ +DEA+ A H L++ E +Q ++EL A+ Q +
Sbjct: 517 DSVLAQLDDLKLQLKGAQDEAEKARYEAEHALESAEKKREELIEQGKRELEDARRQAHEL 576
Query: 536 VQDFENQLRDASADEINSLIKESESAIAAIV----EAHRPDDDFSVSETNT----SSFTP 587
+Q +N+ + + DE+ + K+ +++ A E R D + + T+ F P
Sbjct: 577 MQQVQNEAYNLT-DELRRIQKDEKTSAAQRAVRAREIARKDTETLLKRTDAKPVPKKFVP 635
Query: 588 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 643
Q G++V + L ++LATV P D V V+ G M+ +V +R P+ K
Sbjct: 636 LKEVQIGQEVVIAEL-NQLATVTARPDRDGMVEVRAGIMKTKVPLTGLRA-PDKMEK--- 690
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIA 698
R Q+E R+S + RVQ KN L+L G VEEA ++D
Sbjct: 691 ------RPQREPRRSST------------RVQLDKNRKTSMELNLLGYTVEEALAEVDKF 732
Query: 699 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP-----RVAKY-EQESPMNYGCTVAY 750
L + L++IHG GTG ++ + + LR H R+ +Y E ES G TV
Sbjct: 733 LDSGMLRGQQTLYIIHGNGTGALRSAIQKHLRTHKAVKSFRLGRYGEGES----GVTVVE 788
Query: 751 IK 752
+K
Sbjct: 789 LK 790
>gi|404371451|ref|ZP_10976755.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
gi|226912421|gb|EEH97622.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
Length = 785
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 350/724 (48%), Gaps = 98/724 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D+AS L IR RN++ +S ++ I +A + L T R R + +KA
Sbjct: 145 ISDKASSTLNGIR----RNLKEKNSSVRDKINSIVRANAKYLQDTLYTMRGDRYVLPVKA 200
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K +P G+ + SS+GAT F+EP V NN L E AE IL L+ + ++
Sbjct: 201 EYKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELKLKEKAEIERILMDLSNRVYEN 259
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
++ + E+D FA+ +A ++ +CP V+ D S +I +HPL+
Sbjct: 260 IETVESNYKILTELDFIFAKGKYASSLNAICP------EVNEDRSFDIIQGRHPLI---- 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+P VP DI + E ++ITGPNTGGK
Sbjct: 310 -----------DP--------------------KVVVPSDIYLGKEFNTLMITGPNTGGK 338
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL LM +GL +PAK+ + +F I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTVGLLHLMGLSGLLIPAKDASSISFFTKIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I++ SLVL DE+GSGTDP EG ALA +I+ LR++ + TTHY++L +
Sbjct: 399 IMKEADDSSLVLFDELGSGTDPVEGAALAIAIIDTLREQEARLIATTHYSELKGYALRTA 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 458
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I +A+ + E L+ E
Sbjct: 459 GIENASVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLQDDVINKAKSNISSENLQFED 518
Query: 459 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
R KS L E ++++ +A + E E+ D+A + RR A
Sbjct: 519 LIRDLQEKSILANRDAREAKRIKIEAEELKKKYDEKFKKLEEVRDKAYNEARREAKDIIA 578
Query: 517 ETQQVQQELNFAKVQIDT--VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 574
+ + E+ A +++ + Q +L + +SL K+ ES
Sbjct: 579 KAKDEADEILKAMRELEKLGISQGGRARLEEERKKLKDSLEKKEESL------------- 625
Query: 575 FSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
+ + E NT + G ++ SL + ++ +P V V+ G M++ VK ++R
Sbjct: 626 YKIRE-NTGEVIEKVILGMDAYLPSLNQNV-IIITMPDSRGEVQVEAGIMKINVKLKDLR 683
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
+ N+ P +++++ + +++ ++ +DLRGM EEA
Sbjct: 684 KVNNT---------PNKKEKKKRELKLN-------------LKSIESRVDLRGMDAEEAC 721
Query: 693 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTV 748
++ D L A + + ++HG GTGV+++ + ++L+ HP V Y + G T+
Sbjct: 722 YKTDKYLDEAYMANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSYRLGEYGEGGDGVTI 781
Query: 749 AYIK 752
A +K
Sbjct: 782 AILK 785
>gi|239636360|ref|ZP_04677362.1| MutS2 protein [Staphylococcus warneri L37603]
gi|239597715|gb|EEQ80210.1| MutS2 protein [Staphylococcus warneri L37603]
Length = 782
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 217/730 (29%), Positives = 355/730 (48%), Gaps = 105/730 (14%)
Query: 39 CKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 94
C + D AS +L+ IR++ +R +NLD ++K A Q + ++T R R
Sbjct: 142 CDAHDLYDHASYELQSIRSKISSTNQRIRQNLDRVVKSQANQ----KKLSDAIVTVRNDR 197
Query: 95 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 154
+ +KA ++ +GI + S+SG T ++EP VE NN RL N E E IL+ L
Sbjct: 198 NVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMNNQISRLRNDEAVERERILAEL 256
Query: 155 TAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 213
T+++A E + L + ++ +D A+A +A+ + G P + V ++
Sbjct: 257 TSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTKPTFHKERTVYLPNAY------ 309
Query: 214 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 273
HPLL +++ +N+ D+E V+I
Sbjct: 310 HPLLDHNTV------VANTIEFVDDIE-----------------------------TVII 334
Query: 274 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 333
TGPNTGGKT ++KTLGL +M+++G+ +P + +L F+ + DIGD QS+EQ+LSTFS
Sbjct: 335 TGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFS 394
Query: 334 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 393
H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA SIL ++R+ L + TTHY +L
Sbjct: 395 SHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMSILDHVRNLGALVMATTHYPEL 454
Query: 394 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 453
NA+ EF +ETL PTY++L G G SNA +I+K +G II +A+ ++
Sbjct: 455 KAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIG 514
Query: 454 RLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
E +S S + E+R +L+ + A + H E+ Y++ ++ K L A
Sbjct: 515 TDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQATHDELAKQYQQYQNYEKSLMDEA- 573
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 571
K K Q+V+ A + D ++++ +LRD + +KE E I + +
Sbjct: 574 --KEKANQRVKS----ATKEADAILKELR-ELRDQKGAD----VKEHE----LIDKKKQL 618
Query: 572 DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
DD + + ++ G++V V S G K + V + +VQ G +++++
Sbjct: 619 DDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQKGEVLELVGE--EEAVVQMGILKMKL 676
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
PI + ++ P + +R QT K LDLRG
Sbjct: 677 ------PIEDLEKMKKKKEKPTKMVTRSNR------------------QTVKTELDLRGY 712
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM-- 742
R E+A +LD L A + +++IHG GTG +++ V + L+ H V + P
Sbjct: 713 RYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGVQQHLKRHKSVKTFRGGMPSEG 772
Query: 743 NYGCTVAYIK 752
+G TVA +K
Sbjct: 773 GFGVTVASLK 782
>gi|116490536|ref|YP_810080.1| MutS family ATPase [Oenococcus oeni PSU-1]
gi|116091261|gb|ABJ56415.1| MutS family ATPase [Oenococcus oeni PSU-1]
Length = 795
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 212/749 (28%), Positives = 371/749 (49%), Gaps = 99/749 (13%)
Query: 16 LLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
L ++L N LT+ L +++ +D + +LD ASE+L IR N+ +LL K
Sbjct: 118 LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRKNISTTQNNVRTLLVK 176
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ A + +P+I+ R + + +K+ ++ G+ + S SG T ++EP+ V+
Sbjct: 177 MTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQSGLTLYIEPQATVDL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++I E +IL ++ ++ ++K D + E+DL A+A A M+ +
Sbjct: 235 NNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDLIQAKAKLANSMNAIK 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P H++ + I+++ +HPLL S
Sbjct: 295 P------HLNDEKVIDLKNARHPLLASDS------------------------------- 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
V DI++ + ++ITGPNTGGKT +KTLGL LM++ G+++ A + + F
Sbjct: 318 -----VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQTGIFITAGSDSSIYVF 372
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+G+GTDP EG ALA +
Sbjct: 373 NNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDELGAGTDPGEGAALAMA 432
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
I++ L R L ++TTHY +L D+ NA+ EF T PTYR+L G G SNA+
Sbjct: 433 IVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSPTYRLLLGVPGQSNAI 492
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL---ESQARTAAS-- 487
I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR L E++ R S
Sbjct: 493 AISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRDLSKEENELRNQLSRA 547
Query: 488 ------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKVQIDTVVQD 538
L+ ++ + + E D +A H+ + +E++Q+ ++ +++ +
Sbjct: 548 EQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLDQIRRERLKAGSSTGK 607
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
E QL+ AD+I+ L +++ +++ + F V GE+V V S
Sbjct: 608 NEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------------GEEVMVSSY 654
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
T+++ + + VQ G +++ V +N++ + + K P R++ + + +
Sbjct: 655 HQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKINEPIHRVKNTRVFKTA 712
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 716
S + +DLRG R E+A LD I A + + +IHG GT
Sbjct: 713 SKNISGH---------------IDLRGERYEQAMIDLDRYIDQAMLNNIDTIEIIHGKGT 757
Query: 717 GVVKERVLEILRNHPRVAKYEQESPMNYG 745
G +++ V ++LR+ R+ Y+ +P G
Sbjct: 758 GALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|291557709|emb|CBL34826.1| MutS2 family protein [Eubacterium siraeum V10Sc8a]
Length = 793
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 340/711 (47%), Gaps = 99/711 (13%)
Query: 46 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 154
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 454
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 455 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 514
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 515 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 570
KE Q V+ + + + Q D ++++ E + + + +K + S I + V A
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLKKQKESADFAQKVKGARSHINSSVNAMY 621
Query: 571 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 688 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|331086755|ref|ZP_08335832.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409921|gb|EGG89356.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 790
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 204/653 (31%), Positives = 308/653 (47%), Gaps = 70/653 (10%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 245
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+A+ A EI+ + E+D FA+ FA ++ PI + H
Sbjct: 246 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGH------ 299
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+I +HPLL + VPI + +
Sbjct: 300 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 324
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 384
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALATSIL YL +R +
Sbjct: 385 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 444
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 504
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ ERL Q +L L RR +E + + A+ E+ L +++E + + L
Sbjct: 505 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREVEALKQKLEQKQERL 559
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAI 565
D R + + ++ L AK D +++F + + SA E+ + I
Sbjct: 560 DERKERIINEANEKANAILREAKEVADETMKNFRKFGKENISAAEMERERERLRQKIKKT 619
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
+ D + S F + GE V V SL + TV +P + VQ G +R +
Sbjct: 620 GSGVKLDTKKPKKQHKPSDF--KLGEAVKVLSL-NLTGTVSSLPNAKGDLFVQMGILRSQ 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V +++ I P + + + S + S P + +L G
Sbjct: 677 VNISDLEIIDE----------PVITGKHLQKTSSGKMKMKKTMSVRPEI-------NLLG 719
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
V+EA +LD L A S + ++HG GTG ++ + L+ V Y
Sbjct: 720 KTVDEAIAELDKYLDDAYMSHISPVRIVHGKGTGALRSGIHNYLKRQKHVKSY 772
>gi|241896574|ref|ZP_04783870.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
gi|241870166|gb|EER73917.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
Length = 795
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 201/669 (30%), Positives = 333/669 (49%), Gaps = 73/669 (10%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + +KA+++ G+ + S +G T ++EP V+ NN + E
Sbjct: 188 PIVTIRNDRYVLPVKATYRQKF-GGVIHDQSQTGQTLYIEPADVVDMNNRLREYTLKERR 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE +L L+A++ I+ + +D A+A +A + + P S ++HV
Sbjct: 247 EEERVLIELSAQLEPEADSIENNAQLLGHLDFLNAKARYAVVIKAIEPEFSPENHVRLLK 306
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPLL NP D VP DI +
Sbjct: 307 A------RHPLL---------------NP--------------------DKVVPNDIIIG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ +++TGPNTGGKT ++KTLGL +M+++GL++PA + + F I ADIGD QS+
Sbjct: 326 EDYSAIIVTGPNTGGKTITLKTLGLLQIMAQSGLFIPAAEYSSVGIFKEIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H+ I+DIL ++SLVL DE+G+GTDP EG ALA +IL + + +V
Sbjct: 386 EQSLSTFSAHMVNIIDILSGTDKDSLVLFDELGAGTDPQEGAALAMAILDAVGETGAYSV 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L NA+ EF +++LRPTY+ L G G SNAL IAK +G D+ II
Sbjct: 446 ATTHYPELKVYGYNRADTINASMEFDIDSLRPTYKFLIGVPGRSNALEIAKKLGLDKNII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A L E +++ L+ R + +Q E L + E + +
Sbjct: 506 DSASALTTEDSQEL-----NDMIADLVARRNAVLTQQVELTQKVIENRQLKNDYESKLES 560
Query: 506 LDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+D+ +AK ++ ++E N A+ + D ++ D RD +A + N LI +++ A
Sbjct: 561 IDKE----RAKAVEEAKKEANHIVADARRKTDKIIADLHKMARDGAAIKENKLI-DAKGA 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQF-GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ A+ + ++ + + + P G+ V V+ G + V ++ D VQ G
Sbjct: 616 LNAMHQEPSATNNRILRKAKQAKQVPLLVGDTVLVREYGQQGTIVRKL--KDHKFEVQMG 673
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+++ + I K+ N + P+ K++ R++ S+ ++N+ + R + S
Sbjct: 674 ILKMVLTSEEI-----EKQTNQSTNEPKSTKKK--RRNSSSVNTNKAIN---RAEASA-K 722
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG+R E A +LD I A + S + +IHG GTG +++ V E LR+H +V ++
Sbjct: 723 LDLRGVRYEPAMAELDRFIDKALLNNLSSVEIIHGKGTGAIRQGVQEYLRSHRQVQSFKF 782
Query: 739 ESPMNYGCT 747
P + G T
Sbjct: 783 TGP-DQGAT 790
>gi|403744515|ref|ZP_10953741.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
gi|403122049|gb|EJY56297.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
Length = 780
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 206/677 (30%), Positives = 323/677 (47%), Gaps = 89/677 (13%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P++ R C+ ++ HK L GI +VSSSG+T F+EP+ E R+
Sbjct: 185 LQEPIVAMRGPYYCLPVRVEHKNQL-RGIVRDVSSSGSTVFIEPRAVSEIGE---RIREI 240
Query: 143 EIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E+ EE I L ++A IA E++ + + + DL FA+AG+A+ + G P L+
Sbjct: 241 EVLEEREIERILQQISAVIATVSEELETNVALLEQADLIFAKAGYARRIGGKRPQLT--- 297
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D + G +HP L + VP
Sbjct: 298 ----DGVWRLHGARHPQLHPAG------------------------------------VP 317
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
ID+++ + R+++ITGPNTGGKT ++KT+GL +LM+ +GL+LP + + + + DI
Sbjct: 318 IDVELGADFRLLIITGPNTGGKTVTLKTVGLLTLMAMSGLFLPTRRESEIGFCRDVFVDI 377
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQ+LSTFS H+ I+ +L+ V +SLVL+DE+G+GTDP+EG ALA +IL L
Sbjct: 378 GDEQSIEQSLSTFSSHMKNIIQMLQQVDEKSLVLLDELGAGTDPAEGSALAIAILDRLTQ 437
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
+ TTHYA+L ++ NA+ EF L +LRPTYR+L G G SNAL IA+ +G
Sbjct: 438 VGARVMATTHYAELKGYAFHNSHAMNASMEFDLASLRPTYRLLMGVPGRSNALAIAQRLG 497
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
I+ A++ V +E + E KLE+ R A L E + +
Sbjct: 498 LPDDILAAAREHV------------AETDVHVEELIGKLEAANREAERLRDEAARAWEDA 545
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
+ + LD R L + ++ N A ++ Q+ E +R+ ++
Sbjct: 546 RAQMEQLDARETALDKELADVRERARNEAASIVEKAQQEAERIIRELRQMRHTTVKDHEL 605
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+ +E P+ S + S G++V V SLG K VVEV D + LVQ
Sbjct: 606 VELRKGLEGLVPERKASPRRSGKVSPKLSVGQRVRVISLGQK-GDVVEVAPDSKSALVQL 664
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G MR++V N++ + A P S+ + G + +
Sbjct: 665 GAMRMKVVVNDLEVL-----AEAVEP---------------VAISHSKKRVGNK--DVRM 702
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
LD+RG VE+A ++D L A + + +IHG GTG +K + L+ HP+V E
Sbjct: 703 QLDVRGETVEDALMRIDKYLDDAVVAGLARIVIIHGKGTGALKTAIRRHLQGHPQVKTSE 762
Query: 738 --QESPMNYGCTVAYIK 752
+S G TV ++
Sbjct: 763 PAAQSEGGDGATVVSVR 779
>gi|260587418|ref|ZP_05853331.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|260542285|gb|EEX22854.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
Length = 792
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 210/697 (30%), Positives = 349/697 (50%), Gaps = 88/697 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 97
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 98 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 157
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGHVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E + ++ +L + R+ +E++ A EI L +++E++ L++R +
Sbjct: 513 EDESFE--DVLSTLEQSRKTIEAEEAEIARYKTEIESLKKQLEEKQDKLEQRKERILRDA 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ + L AK D ++ F +++ SA E +++ S + ++
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDQTGKKMALK 626
Query: 577 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
E S+ T + G+ V V SL K T+ P V VQ G +R +V ++++
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
I AP L++ G+ S ++T ++L G V+EA
Sbjct: 686 ID-----EPVITAPSLQR---------TGAGKIRMSKSASIRT---EINLLGKTVDEAIA 728
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
+LD L A + + V+HG GTG +++ V L+
Sbjct: 729 ELDKYLDDAYLAHLNSVRVVHGKGTGALRKGVHNYLK 765
>gi|256545517|ref|ZP_05472877.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
51170]
gi|256398728|gb|EEU12345.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
51170]
Length = 781
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 222/737 (30%), Positives = 341/737 (46%), Gaps = 124/737 (16%)
Query: 44 ILDRASEDLELIRAE-RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 102
I D AS +L IR + K+ E + L +++ F DK +++ R R + +K +
Sbjct: 141 IADNASANLRSIRKKIGKKEAEIKNKLSFYISSPKFDESLQDK-VVSIRDGRYVLPVKTN 199
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIA 159
K +L +GI + S SG T F+EP VE NN LSN +I E I L L+ +
Sbjct: 200 KKSVL-NGIIHDRSQSGNTLFIEPNAIVELNN---DLSNLQIEESDEIRRILDRLSRFVE 255
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++EI + ID A+ + + P L+ + IN++ +HPLL G
Sbjct: 256 GFDQEILENQKLIQRIDFLQAKVKYFLAHEYTMPKLTDKK------IINLKSARHPLLKG 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ VPID+K+ + ++ITGPNTG
Sbjct: 310 NV------------------------------------VPIDVKIGDGYKTLIITGPNTG 333
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL SLM++AG Y+P + FD I DIGD QS+E +LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLVSLMAQAGFYIPCDEDSVVNVFDDIFLDIGDTQSIEMSLSTFSASLTNI 393
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I E VS SLVL+DE+GSGTDP+EG ALA SIL++L+++ + TTHY++L +
Sbjct: 394 VKITENVSENSLVLLDEVGSGTDPTEGAALAISILEFLKNKNVMTFATTHYSELKYYALE 453
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER----- 454
NA+ EF +E+L PTY+++ G+ G SNA I+K +G D+KI+ A+ ++
Sbjct: 454 KEGVMNASVEFDVESLSPTYKLIIGTPGKSNAFEISKRLGLDKKILANAKSILSDDNKNF 513
Query: 455 ---LRPERQQHRKSELYQSLMEERRKLESQART-AASLHAEIMDLYREIEDEAKDLDRRA 510
L Q ++ E+ +E+ +K +AR +L I +EI ++A+D +A
Sbjct: 514 NTILEQLDQNKKEMEIKNQEIEDYKKKIKKARNDLLALSENIKKQEKEIIEKAED---KA 570
Query: 511 AHLKAKETQQVQQELNFAK-------VQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
+ + + Q L AK ID + D N+ +D+ D + KE S A
Sbjct: 571 NKILEEANKASQDMLKIAKKSKNGNTSDIDRSLNDIRNKYKDSKIDRQEEVFKEKISKNA 630
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
PQ G+ V ++ L +K A V+E P + + VQ G
Sbjct: 631 -----------------------PQNLKVGDVVLIEGLNEK-AQVIENPDEKGNIKVQMG 666
Query: 621 KMRVRVKKNNIRPIP-NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
+++ N+ I N+K K N + +K P
Sbjct: 667 ILKMDSNIKNVTKIKSNNKTKENTNRIYKAKKAMH---------------ISP------- 704
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
+LDLRG R +EA D L A +IHG GTG ++ + + L+N+ + Y
Sbjct: 705 TLDLRGQRYDEALRNFDKYLDDAMLSGLDQAKIIHGKGTGALRNGINDYLKNNKMIDSYR 764
Query: 738 --QESPMNYGCTVAYIK 752
E YG T+ K
Sbjct: 765 PGNEKEGGYGVTIVKFK 781
>gi|423719024|ref|ZP_17693206.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367927|gb|EID45202.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 784
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 218/722 (30%), Positives = 344/722 (47%), Gaps = 95/722 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+++ I CID + LD ASE L IR + + R E L+S+++ +AQ
Sbjct: 129 LPEVQQAIERCIDDHGEV-LDHASERLRSIRQQLRTTEARVREKLESIIRSPSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + S+SGAT F+EP+ VE NN
Sbjct: 185 -LSDAIITIRNDRYVIPVKQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNQLQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ LT +A + + + ++D FA+A +A + P L+ + ++
Sbjct: 243 KEKREIERILTELTGIVAGHAEALLENVGILAQLDFIFAKAKYANKLKATKPALNDRGYI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ ++ VP D
Sbjct: 303 RLLQA------RHPLIDQEAV-----------------------------------VPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KT+GL +LM++AGL++PA + L F I ADIGD
Sbjct: 322 IELGKDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELAVFRSIYADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVEILRDVDHESLVLFDELGAGTDPQEGAALAIAILDEVHGRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF ETLRPTY++L G G SNA I+K +G D
Sbjct: 442 ARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPGRSNAFEISKRLGLD 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+II+RA +L + + + SL + +++ E + + A E L R+ E
Sbjct: 502 ERIIERA-----KLHISAESNNVENMIASLEQSKKRAEEELKRAEEARMEAEQLRRDWEQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-- 559
+ ++L + + + ++ + ++ + + ++ + ++ A+ IKE E
Sbjct: 557 KWEELHEKREEIIEEAKRKAADIVRSSQQKAERIIHELRRMQQEKQAE-----IKEHELI 611
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A + EA + + + Q G++V V SL K V +V DD VQ
Sbjct: 612 EAKKRLQEAMPTLEKKKKERKKQAIHSFQPGDEVKVISLNQKGYLVEKV--SDDEWQVQL 669
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +++++ + ++ I S K P ++ + D G
Sbjct: 670 GILKMKINERDLEYI-GSAPKTETKPLATVKGK--DYHVGL------------------- 707
Query: 680 SLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
LDLRG R E+A +L D LA + S+ IHG GTG +++ V E L+ H V
Sbjct: 708 ELDLRGERYEDALARLEKYIDDALLAGYPRVSI---IHGKGTGALRKGVQEFLKTHRAVK 764
Query: 735 KY 736
+
Sbjct: 765 SF 766
>gi|304440485|ref|ZP_07400372.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370963|gb|EFM24582.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 786
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 213/733 (29%), Positives = 363/733 (49%), Gaps = 90/733 (12%)
Query: 28 ELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGI 83
++E++I CI + I D AS L IR + K+ E LDS++ ++ Q
Sbjct: 132 QIEDRISECIISEEEI-SDSASPKLRQIRRNIFVKNKQIREKLDSIVNS-GSKYLQDN-- 187
Query: 84 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 143
++T R R + +K+ +K + G+ ++S++G T ++EP V NN L E
Sbjct: 188 ---IVTMREGRYVIPVKSENKNKIK-GLVHDMSATGQTAYIEPIAVVNLNNELKTLEIEE 243
Query: 144 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
E IL+ L+A +A +IK D + +D FA+A A M+ P ++
Sbjct: 244 REEIERILAELSAYVADYSLQIKGNQDILSRLDFIFAKAKLAFEMEATKP------KINN 297
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
D S+ + +HPLL + + VPIDI
Sbjct: 298 DLSLKLYKARHPLLKKNEV-----------------------------------VPIDIS 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ E ++ITGPNTGGKT ++KT+GL ++M++ GL++PA+ ++ FD I +DIGD Q
Sbjct: 323 LGKEFTSLIITGPNTGGKTVTLKTVGLLNIMAQYGLFIPAEEGSQVGIFDKIFSDIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H+ IV+ILE SLVL DE+G+GTDP+EG ALA SI+ ++ +R
Sbjct: 383 SIEQSLSTFSSHMVNIVNILENADERSLVLFDELGAGTDPTEGAALARSIMDFMLERKIR 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+ TTHY L +NA+ EF ++TLRPTYR++ G G SNA I+K +G
Sbjct: 443 CISTTHYNQLKTYALTTEGVQNASMEFDVDTLRPTYRLIIGIPGKSNAFLISKRLGLRDD 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE---IE 500
II+ A+K + + E ++ + +++ ++R ++E R+ A L+ +DL ++ +E
Sbjct: 503 IIEDAKKQMSQDSIEFEK-----VLENIEKDRWEIEKH-RSEAELYK--IDLEKQNKRLE 554
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+E + + + K ++ +Q +N AK + + + + ++ + + S D+ L +ES+
Sbjct: 555 EELASMKEKREDILEKARREARQIINRAKEESELALSEIKDVVSEVSKDQARRL-QESQD 613
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
I + D + + + GE V + SL K TV+E+P + VLVQ G
Sbjct: 614 LIRENLNKASKKDKILIEAVKNPAENIKPGETVMIASLNAK-GTVLELPDSNGDVLVQAG 672
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
M+++VKK I I D + S S+ + R T++
Sbjct: 673 MMKMKVKKEAIIRI--------------------DDEESSKSSTKNIIKHKSRTATTE-- 710
Query: 681 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
+D+RG ++A ++D L + + +IHG GT V++E++ + + + ++
Sbjct: 711 IDVRGRNFDDAKVEVDKFLDDSYLSGLKSVRIIHGKGTMVLREKLRADFKKNKYIKSFDD 770
Query: 739 ESPMNYGCTVAYI 751
S G V +
Sbjct: 771 ASYNEGGNGVTVV 783
>gi|205374420|ref|ZP_03227217.1| recombination and DNA strand exchange inhibitor protein [Bacillus
coahuilensis m4-4]
Length = 766
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 228/761 (29%), Positives = 358/761 (47%), Gaps = 111/761 (14%)
Query: 9 IFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNME 64
IFH L+ LT LE +I ID I LD AS L IR++R+ R E
Sbjct: 100 IFHG------LISEMPILTGLEHEIKQSIDDNGEI-LDGASPALRSIRSQRRLTEGRVRE 152
Query: 65 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
L+S+++ AQ + I +T R R + +K ++ GI + SSSG T F+
Sbjct: 153 KLESMVRSRNAQKMLSDAI----VTIRNDRYVLPVKQEYRGHY-GGIVHDQSSSGQTLFI 207
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP+ V+ NN L E E IL L+ +++ ++ +++ + ID F +A +
Sbjct: 208 EPESVVQLNNSLRELRVKEQTEIEKILLELSGRVSEVTEDLSVIINHLAHIDFMFTKAKY 267
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
+ + G P ++ + + + +HPLL
Sbjct: 268 GRSIKGTKPSMNDKGRIKLFKA------RHPLL--------------------------- 294
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
GI + V DI + + +VITGPNTGGKT ++KT+G+ +L+++AGL +PA
Sbjct: 295 -------GIEE-AVANDIFLGEDFTTIVITGPNTGGKTVTLKTIGICTLLAQAGLPIPAL 346
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
+ L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V +SLVL DE+G+GTDP
Sbjct: 347 DGSELAVFQSVYADIGDEQSIEQSLSTFSSHMVNIVDILDKVDFQSLVLFDELGAGTDPQ 406
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA SIL Y+ R V TTHY +L NA+ EF +ETLRPTYR+L G
Sbjct: 407 EGAALAISILDYVYKRGARVVATTHYPELKAYGYNREGVVNASVEFDVETLRPTYRLLLG 466
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA I+K +G +I A R+ + + SL E +R E +
Sbjct: 467 VPGRSNAFEISKRLGLSDDVIDYA-----RVHIGTDSKQVENMIASLEESKRMAEKERME 521
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A L L+R+++ + + + L K + + + AK + + ++++ N LR
Sbjct: 522 ANELLKSADKLHRDLQKQTVEYYEKKDELVDKAKDKAIKIVEEAKREAEEIIRELRN-LR 580
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFS---------VSETNTSSFTPQFGEQVHV 595
N+ +KE E ++EA + +D + S T++ P G+ V V
Sbjct: 581 IQK----NAEVKEHE-----LIEAKKRLEDATPTKNMKKTQASRTDSKELRP--GDDVKV 629
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
S G K ++E G+ + VQ G ++++V+ +I + K K P ++ +
Sbjct: 630 LSFGQK-GVLLEKTGEAEWA-VQMGILKMKVETKDIEFVSRKKEK-VTKPLATVKGK--- 683
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHG 713
Y ++ LDLRG R + A ++++ I A S + +IHG
Sbjct: 684 -------------DYHVSLE-----LDLRGERYDHALNRVEKYIDDALLASYPRVSIIHG 725
Query: 714 MGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
GTG +++ V E L+NH V ++ + G TV K
Sbjct: 726 KGTGALRKGVQEYLKNHRSVKSIRFGEAGEGGTGVTVVEFK 766
>gi|373465637|ref|ZP_09557092.1| MutS2 family protein [Lactobacillus kisonensis F0435]
gi|371759887|gb|EHO48594.1| MutS2 family protein [Lactobacillus kisonensis F0435]
Length = 787
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 214/718 (29%), Positives = 341/718 (47%), Gaps = 109/718 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS +L IR R ++ + + K + A + +P+IT R R + I+A +
Sbjct: 147 VLDSASSELRAIRKSISRTQTDIRTKMGKFI-KGSDAKYLSEPIITVRDDRFVLPIRADY 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + S+SG T ++EP VE NN R +E AE IL LT +
Sbjct: 206 KQHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEVRRILGELTNLLRPYRN 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E+ M+ V ++D A+A +A + P +S D+ +N+ +HP++
Sbjct: 265 ELMTNMNLVGQLDFVNAKAKYAHQTGSIQP------RISKDNVVNLRKARHPMI------ 312
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
D V DI++ + +++TGPNTGGKT
Sbjct: 313 -----------------------------DRDKVVANDIEIGDKYSTIIVTGPNTGGKTI 343
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
+MKT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ +L
Sbjct: 344 TMKTIGLLQLMGQSGLFITANEDSQIGAFDEVFADIGDEQSIEANLSTFSSHMDNIISML 403
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ +S SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L +
Sbjct: 404 DKISNNSLVLLDELGAGTDPKEGAALAMAIIDAIHATGCELIATTHYPELKAFAYNRSGI 463
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NA+ EF + TLRPTYR L G G SNALNIA+ +GF ++II A+ + + + +
Sbjct: 464 INASMEFDVNTLRPTYRFLMGIPGQSNALNIAQKLGFPKQIIDNARSFTDS-KNQDINNM 522
Query: 464 KSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
+EL + +E +L+ Q + LH E+ + + + + + DR + K +
Sbjct: 523 IAELTAQTKRAHDEADQLQKQLAESTKLHQELTNQFNKYQAQR---DRLTEQAQEKANRV 579
Query: 521 VQQELNFAKVQIDTVVQDF-------------ENQLRDASADEINSLIKESESAIAAIVE 567
V++ AK Q D ++ D EN+L DA E+N L ++
Sbjct: 580 VEE----AKQQADKIIADLHQKQKQIGKVAIKENELIDAKG-ELNKLEVAPNLKKNKVLT 634
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV--EVPGDDDTVLVQYGKMRVR 625
+ +F G+ V VKS G + T++ E G D VQ G ++++
Sbjct: 635 KEKEKHNFHT------------GDDVLVKSYGQQ-GTLIGKEKNGTWD---VQIGILKMK 678
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
+ + +I I AA+ + + Q ++ S+G S P +LDLRG
Sbjct: 679 IDEADIEKI-------AADKQSKPQYQTHVSRTRSSGIS-------P-------TLDLRG 717
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
R EEA +LD I A + +IHG GTG +++ V + L+ + RV + +P
Sbjct: 718 HRYEEAMFELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTDYLKRNKRVKSFGYSAP 775
>gi|336394748|ref|ZP_08576147.1| mutS family ATPase [Lactobacillus farciminis KCTC 3681]
Length = 784
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 214/720 (29%), Positives = 346/720 (48%), Gaps = 96/720 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIK 100
+LD ASEDL+ IR + R L+ ++ Q + + + L+T R R + +K
Sbjct: 146 VLDTASEDLKYIRNQITR----LNDQIRHTMEQYTRGKNTKYLTENLVTLRDDRFVIPVK 201
Query: 101 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 160
+K G+ + S+SG T ++EP+ V NN SE AEE IL+ L+ +
Sbjct: 202 TEYKTKFG-GVVHDQSASGQTLYIEPQAVVGMNNQLHEAQVSEKAEEIRILNKLSDLVRP 260
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
EI + + + DL A+A +A+ + PI+S D +++ KHPL+
Sbjct: 261 QIDEILENNEVLAQFDLINAKAKYAKEIKATEPIISK------DHIVDLHDAKHPLI--- 311
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
+P D V DIK+ + ++ITGPNTGG
Sbjct: 312 ------------DP--------------------DKVVANDIKMGEGYKTMLITGPNTGG 339
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT +MKTLGL LM++AGL++PA + FD + DIGD QS+EQNLSTFS H+ I+
Sbjct: 340 KTITMKTLGLIQLMAQAGLFIPAHEESEIAVFDEVFVDIGDEQSIEQNLSTFSSHMDNII 399
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
+I+ VS SLVLIDE+G+GTDP EG A+A +IL+ L + TTHY +L
Sbjct: 400 NIIRKVSEHSLVLIDELGAGTDPQEGAAIAIAILEKLAQSHCFIMATTHYPELKIFAYNT 459
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
NA+ EF ++L+PTYR+L G G SNA NIA +G D+ ++ R Q L+ + +
Sbjct: 460 PETINASMEFDEKSLKPTYRLLIGIPGASNAFNIAARLGMDKGVVNRGQALM-----DGE 514
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR-RAAHLKAKETQ 519
+ + L R++ E + A+ D+ ++ E ++ LD+ + + ++A +
Sbjct: 515 SQDLNNMIADLENRRKEFEQKNDQLKVQLAKNKDVQKDYEKKSDALDKSKNSEIQAAKV- 573
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ Q ++ A+ + D +++ +D A +KE + IAA D +V +
Sbjct: 574 RANQIVSKARKESDKIIEKLHKLEQDGVA------VKEDQ-IIAAKTGLKNLHQDEAVKK 626
Query: 580 T-----NTSSFTPQFGEQVHVKSLG-DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
N + G+ VKSL D++ T+V ++ VQ G ++++ + +
Sbjct: 627 NRVLRRNKRRQQLKVGDT--VKSLQYDQIGTIVR-KNKNNEFEVQLGILKMKFGADELEK 683
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ N + P P + R + SS LDLRG R EEA
Sbjct: 684 VQNQE------PEPEKKPTMVKRTKSTGLSS---------------KLDLRGKRYEEAMA 722
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+LD I A + + ++HG GTGV+++ V + L+ +P V + +P + G + A I
Sbjct: 723 ELDQYIDSALLAGYNQVTIVHGFGTGVIRKGVTKYLQRNPHVKSFGY-APASSGGSGATI 781
>gi|210623508|ref|ZP_03293853.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
gi|210153566|gb|EEA84572.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
Length = 793
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 217/700 (31%), Positives = 338/700 (48%), Gaps = 96/700 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR + + +++ S L + + + +I+ R R V +KA +
Sbjct: 147 IADSASHTLRDIRRKIVQKNQSIRSKLNTIISSATYQKYLQDSIISMRGDRFVVPVKAEY 206
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ ++ GI + SSSGAT F+EP VE NN +L E E IL+ L+ I + R
Sbjct: 207 RSVVA-GIVHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILAELSKMIGEIAR 265
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI + + +ID FA+ + M G+ P L+ D S I+ +HPLL
Sbjct: 266 EIISNQEILEKIDFIFAKGKLSLEMKGIDPKLNK------DKSFVIKNGRHPLL------ 313
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K + N+ I + E +VITGPNTGGKT
Sbjct: 314 ---------DP-KKVIANT-------------------IYLGDEFHTLVITGPNTGGKTV 344
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++GL++PA + +D I ADIGD QS+EQ+LSTFS H++RIV IL
Sbjct: 345 TIKTVGLFALMTQSGLHIPADFGSSMCVYDNIFADIGDEQSIEQSLSTFSSHMTRIVSIL 404
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R + TTHY++L
Sbjct: 405 DKVTEDSLVIFDELGAGTDPVEGAALAIAILEDVRMAGAKCIATTHYSELKNYALTKKGV 464
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENAA EF +ETL PTYR+L G G SNA I+K +G +I RA++ + E +
Sbjct: 465 ENAAVEFDVETLSPTYRLLIGVPGKSNAFEISKKLGLSEFVINRAKEFINTENIELE--- 521
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+L Q++ + R K E A L EI + R+ E E + + + K K ++ +
Sbjct: 522 --DLLQNVEKNRIKAEEDRAEAEKLKTEI-QMIRDAEAEKLE---KLTNQKEKMMERARS 575
Query: 524 E----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
E AK ++D +++ ++ ++ E N I++ + D S+
Sbjct: 576 EAFSITRQAKEEVDEIIKRLRELEQERASKEKNRQIEQLRKELT--------DSMGSLQP 627
Query: 580 TNTSSFTP----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
T S P + GE V V +L + TVV +VQ G M++ +
Sbjct: 628 TVKSMIVPKVASKEIKNLKVGEDVKVITLNQE-GTVVSADDKKKEAVVQIGIMKMTLPYK 686
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
+++ I N ++ + K + R G +DLRGM +E
Sbjct: 687 SLQRIKNQQQATVTKKTRSVIKAKSGRVKG--------------------EVDLRGMNLE 726
Query: 690 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
EA+ +L+ L A + VIHG+GTGV+K + ++L
Sbjct: 727 EATLELEKYLDDATVAGLEQVTVIHGVGTGVLKTGLQDVL 766
>gi|384160390|ref|YP_005542463.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|384169470|ref|YP_005550848.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
gi|328554478|gb|AEB24970.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|341828749|gb|AEK90000.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
Length = 785
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 218/742 (29%), Positives = 362/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIVQNVEVLQTLDFIFAKARYAKAMKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYTTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEQSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + L + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKLMEEAEQKAAEKLEDAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPER----KTEKKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|384165327|ref|YP_005546706.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens LL3]
gi|328912882|gb|AEB64478.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
LL3]
Length = 785
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 218/742 (29%), Positives = 362/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIVQNVEVLQTLDFIFAKARYAKAMKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYTTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEQSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + L + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKLMEEAEQKAAEKLEDAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|408789877|ref|ZP_11201518.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
gi|408520899|gb|EKK20921.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
Length = 785
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 217/735 (29%), Positives = 350/735 (47%), Gaps = 86/735 (11%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGI 83
L EL +++ +D + LD AS+ L+ +R + ++ + + K+ I +A +
Sbjct: 129 LPELNQRLLQSVDATGWL-LDTASQQLQQLRHQIEQTQATIKT---KMNGYIHGKRAKYL 184
Query: 84 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 143
+IT R R + +KA K GI + S+SG T ++EP+ VE NN +
Sbjct: 185 SDTVITIRDDRYVIPVKAEAKQQF-GGIVHDQSASGQTLYVEPQAVVELNNQLRFQQKAA 243
Query: 144 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
+ EE IL+ L+ E+ + ++ +DL A+A +A+++ P LS ++ V
Sbjct: 244 LQEEKRILAELSDELRPEGAHLAANATQLGHLDLINAKARYARFLHATKPKLSIRNEVHL 303
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
++ +HPL+ SL NS I++
Sbjct: 304 KTA------RHPLI------SLDRVVGNS---------------------------IELN 324
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+C R ++ITGPNTGGKT +MKTLGL LM+++GL++ A ++ FD + ADIGD Q
Sbjct: 325 QDC--RQLIITGPNTGGKTITMKTLGLLQLMAQSGLFIAADEGSQVGVFDEVFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQNLSTFS H+ I+ IL+ + SLVLIDE+G+GTDPSEG ALA +IL +
Sbjct: 383 SIEQNLSTFSSHLDNIIQILQQTTARSLVLIDELGAGTDPSEGAALAMAILDAIERLHST 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
+ TTHY +L ENA+ EF ETLRPTYR+L G G SNAL IA+ +G +
Sbjct: 443 VLATTHYPELKAYAYNHVATENASMEFDEETLRPTYRLLMGVPGQSNALQIARRLGLSEQ 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
I+ +A + E Q + + + R E + A L A +L +E++D
Sbjct: 503 IVNQATAYTD----ETDQDLNRMITELTQQTRLAHERSTQLAEKLKA-TTELQQELQDHF 557
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 563
+ L + ++ Q + K + V+ D + RD + I + +
Sbjct: 558 GQFQAQREQLVNQAKREANQLVTKTKREAQAVIDDLHQKQRDLQGGVKENEIIADQGKLN 617
Query: 564 AIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
A+ + A R + V + + + T + G+ V VK+ G + ++ G + VQ G
Sbjct: 618 ALEQQPALRKN---RVLKRSKAKQTLRVGDDVLVKNYGQQ-GVLLRKLGQQNWE-VQLGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
++++V ++N+ R+ A P +R+ + SA +L
Sbjct: 673 LKMKVAESNLE--KQGTRQQPAKGTPMVRR------TKSAAVP--------------TTL 710
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
DLRG+R ++A H+LD L A + ++HG GTG ++ V +IL H +V K+
Sbjct: 711 DLRGVRYDDAMHRLDQYLDAALLAGYPTVTIVHGKGTGALRTGVTKILSRHRQVQKFSFA 770
Query: 740 SPM--NYGCTVAYIK 752
P G TV K
Sbjct: 771 PPSAGGDGATVVTFK 785
>gi|304436503|ref|ZP_07396477.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370549|gb|EFM24200.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 785
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 225/686 (32%), Positives = 338/686 (49%), Gaps = 111/686 (16%)
Query: 55 IRAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 113
+R + R E L S+L A Q +FQ + ++T R R + +K ++ P G+
Sbjct: 157 LRTAQSRVKERLSSILHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIH 210
Query: 114 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 173
+ S+SGAT F+EP VE NN ++ + E I+ LT EIA+S + +
Sbjct: 211 DQSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADVLSANCTILS 270
Query: 174 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 233
++DL FARA A+ M PIL+ D +++ +HPLL
Sbjct: 271 DLDLIFARASLAREMSAYPPILNR------DGYVHLRRARHPLL---------------- 308
Query: 234 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 293
P D VPIDI++ ++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------PDKVVPIDIELGKTFSTLLITGPNTGGKTVSMKTLGILAL 349
Query: 294 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 353
MS++G +LPA++ +P + I ADIGD QS+EQ+LSTFS H IV I++ + LVL
Sbjct: 350 MSQSGCFLPAESGSEIPIYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATFGDLVL 409
Query: 354 IDEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 412
+DE+G+GTDP EG ALA SI++ +L +R+ V TTHYADL ENA+ EF L
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDL 468
Query: 413 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQS 470
+TLRPTYR+L G G SNA +I++ +G +I+ RA++ V + + E H E ++
Sbjct: 469 KTLRPTYRLLIGIPGASNAFSISRQLGLPEEIVARAEEYVSEDHAQFETVVH-DLERAKT 527
Query: 471 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 530
+ EE+ +L LY++ D + R A A E Q Q+ L+ A+
Sbjct: 528 IYEEKNQL----------------LYKKETDVGRAESRLRAERAAFE-QSKQELLHKARE 570
Query: 531 QIDTVVQDFENQLRDASADEINSL--------IKESESAIAAIVEAHRPDDDFSVSETNT 582
+ + +V+ + R ++ + I SL IKE + AI A ++S
Sbjct: 571 EANNIVR----EARRSAEETIQSLKEQFDDHGIKERQKAIQAARSRLNEAYVHNISPKIP 626
Query: 583 SSFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 636
+ P Q G+ V++++L + TV+ V G + + VQ G +R VK + + +
Sbjct: 627 AEGRPVRPGEIQSGDTVYIRTLAQE-GTVLSVQGKE--LSVQVGGLRTMVKMDACTFVGH 683
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
KRK N G S + S R Q +D+RGM V EA L+
Sbjct: 684 PKRKKKIN-------------KIRIGGSLAQKSAEVRPQ-----IDVRGMTVLEAEAVLE 725
Query: 697 --IALACWESRSVLFVIHGMGTGVVK 720
I A + S + VIHG GTG ++
Sbjct: 726 KFIDDAVFAGLSTVLVIHGKGTGALR 751
>gi|310828853|ref|YP_003961210.1| MutS2 family protein [Eubacterium limosum KIST612]
gi|308740587|gb|ADO38247.1| MutS2 family protein [Eubacterium limosum KIST612]
Length = 789
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 359/745 (48%), Gaps = 117/745 (15%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L LL C ELE++I I + + D AS +L IR E + L + +
Sbjct: 121 LFTLLAPCE---ELEKEISHKILSEGEMA-DNASRELSRIRREINFKNTRISDKLNGIIS 176
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ + +IT R +R V +K ++ +P GI L+ S+SGAT ++EP VE NN
Sbjct: 177 ASQNEKYLQERIITIRNNRYVVPVKQEYRGQIP-GIVLDRSASGATLYIEPLAVVELNND 235
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
L+ E E IL L+ ++A + E+ + ++E+D FA+ + + GV
Sbjct: 236 LKVLAAEEEKEIIRILKDLSEKVANYKEEVIEDYNLLVELDFQFAKGKYGLAVGGVL--- 292
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+HVS + I+ +HPL+ + ++ V S
Sbjct: 293 ---THVSEEGKIHFIKGRHPLI-----------------------DPKVVVAS------- 319
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
DI ++ + ++ITGPNTGGKT ++KT+GL +LM ++GL++P + + I
Sbjct: 320 -----DIYMDEDINTMIITGPNTGGKTVTLKTIGLLNLMVQSGLFVPVREGSATRVYKNI 374
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H++ IVDI++ ++LVL DE+G+GTDP+EG ALA SIL
Sbjct: 375 YADIGDEQSIEQSLSTFSSHMTNIVDIMKNADADALVLFDELGAGTDPTEGAALAISILN 434
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
L +R +V TTHY++L NA+ EF + TLRPT+++L G G SNA IA
Sbjct: 435 TLHERGVTSVSTTHYSELKEYALVTRGVVNASVEFDVATLRPTFKLLIGVPGKSNAFEIA 494
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G II+ ++KL+ E + R E + E+R+K E++ H EI+ L
Sbjct: 495 RRLGLSEDIIEASKKLI-----ENEAIRFEETLIKIEEKRKKTEAE-------HEEILRL 542
Query: 496 YREIED--------------EAKDLDRRAAHLKA-------KETQQVQQELNFAKVQIDT 534
R+IE+ E+ ++ RA + +ET+++ +E+ + +
Sbjct: 543 RRQIENMKAEMADEREKARAESAEMIERAQEEASAIVRDTRQETEEIYKEIRYIQETTAQ 602
Query: 535 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVH 594
V+D + + + IK+ E I + + RP + + G +VH
Sbjct: 603 SVKD------NKKLESLRRKIKDQEKNIFDMYKIARP-----DEDEELDIDDIKMGMKVH 651
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQ 653
VKSL K VV++ D +V+VQ M+++V ++ SK K A P ++ +
Sbjct: 652 VKSL-HKDGEVVKIMPKDSSVMVQTDNMKLKVGLADL-----SKSKAIAKPKEKKVSYKS 705
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVI 711
DR T LDLRG EE+ + +D I+ A L ++
Sbjct: 706 ADR------------------HTMNTKLDLRGKNGEESLYLVDKMISDALVSGTHQLMIV 747
Query: 712 HGMGTGVVKERVLEILRNHPRVAKY 736
HG GTG +++ + L+++ + +
Sbjct: 748 HGKGTGKLRQIIHAYLKDNSLIKDF 772
>gi|331083698|ref|ZP_08332809.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403909|gb|EGG83461.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 792
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 212/705 (30%), Positives = 349/705 (49%), Gaps = 88/705 (12%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 97
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 98 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 157
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGQVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 158 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E + ++ +L + R+ +E++ A EI L ++E++ L++R +
Sbjct: 513 EDESFE--DVLSTLEQSRKTIEAEEAEIARYKTEIESLKTQLEEKQDKLEQRKERILRDA 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 576
++ + L AK D ++ F +++ SA E +++ S + ++
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDTTGKKMALK 626
Query: 577 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
E S+ T + G+ V V SL K T+ P V VQ G +R +V ++++
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
I AP L++ G+ S ++T N L G V+EA
Sbjct: 686 ID-----EPVITAPSLQR---------TGAGKIRMSKSASIRTEIN---LLGKTVDEAIA 728
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+LD L A + + V+HG GTG +++ V L+ V +
Sbjct: 729 ELDKYLDDAYLAHLNSVRVVHGKGTGALRKGVHNYLKRLKYVKDF 773
>gi|403387033|ref|ZP_10929090.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sp. JC122]
Length = 788
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 207/694 (29%), Positives = 343/694 (49%), Gaps = 79/694 (11%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 103
DRAS+DL IR R ++ S +K+ + +A + + L T R R + ++A +
Sbjct: 147 DRASDDLYNIR----RKLKQKSSSVKEKVNSLLRANSKYLQENLYTIRGDRYVLPVRAEY 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ + S++GAT F+EP V NN L E E IL LL+ ++ +
Sbjct: 203 KDQVP-GLIHDQSATGATLFIEPMSLVNLNNEIRELFIKEKKEVERILRLLSKKVTNNIE 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I+ + + E+D FA+A +A ++G+CP ++ + + IE ++HPL+ +
Sbjct: 262 LIENDANILWELDFIFAKAKYASEINGICPEINDKGIIDL-----IE-VRHPLIDAKVV- 314
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VP + + E +VITGPNTGGKT
Sbjct: 315 ----------------------------------VPNSVYLGREFTSLVITGPNTGGKTV 340
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM+ +G+ +PA+++ + +F + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 341 TIKTVGLVHLMAMSGILIPARSNSVVSFFKNVYADIGDEQSIEQSLSTFSSHMTNIVGII 400
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E SL L DE+GSGTDP+EG ALA SIL+ L+ R V TTHY++L K
Sbjct: 401 EEADENSLCLFDELGSGTDPTEGAALAVSILENLKKRGCRVVATTHYSELKGYALKTLGV 460
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 461
EN + EF++ETL PTY++L G G SNA I++ +G II+ A++ + + L E
Sbjct: 461 ENGSVEFNVETLSPTYKLLIGVPGKSNAFEISRRLGLPEYIIKDAKENISTDSLNFE--- 517
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
EL QSL + K E+ AR A +L + L + E++ ++ + ++
Sbjct: 518 ----ELIQSLQAKSIKAENDARMAEALKKDAEKLKEKYEEKLYKFEKARENALYSAQREA 573
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 581
+ + AK + DT +++ R + + ++E I +E + T
Sbjct: 574 KNLIKQAKEESDTALKNIREIERLGYSSDARKKLEEERKKIKDKLEHAELIETKKQEATG 633
Query: 582 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 641
G++V++ L + + +V + V VQ G M++ VK ++R +
Sbjct: 634 EKLKKVNEGDEVYLPKLNQNVIVISKVDSRGE-VQVQAGIMKITVKFEDLR------KSK 686
Query: 642 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 699
+ P +RK ++ EA R++ + S+DLRGM EEA + +D L
Sbjct: 687 SIKPDKAIRKMEK-----------REAKL--RLKNTPTSVDLRGMDSEEAIYTVDKYLDD 733
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ +IHG GTG+++ + ++L+ HP V
Sbjct: 734 VYIAGLGEVSIIHGNGTGILRSSINDLLKRHPHV 767
>gi|319892134|ref|YP_004149009.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161830|gb|ADV05373.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
Length = 782
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 217/731 (29%), Positives = 348/731 (47%), Gaps = 107/731 (14%)
Query: 39 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
C + D AS +L+ IR+ + + + + L ++ + ++T R R +
Sbjct: 142 CDTQDLFDSASMELQAIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNERNVIP 201
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
++A ++ +GI + S+SG T ++EP VE NN RL + E E IL+ LTAE+
Sbjct: 202 VRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAELTAEV 260
Query: 159 AKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
A+ + ++V+ +D +A +A + G P + + V + HPLL
Sbjct: 261 AEEAEAC-LISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF------HPLL 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
D V I+ E + V+ITGPN
Sbjct: 314 -----------------------------------DRDTVVANTIEFESSIQTVIITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KTLGL LM+++GL +P + +L FD + DIGD QS+EQ+LSTFS H+
Sbjct: 339 TGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTFSSHMK 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV+ILE + +SL+L DE+G+GTDPSEG ALA SIL ++ L + TTHY +L
Sbjct: 399 TIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPELKAYS 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
NA+ EF ++TL PTY++L G G SNA +I+K +G KII A+ ++
Sbjct: 459 YNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI----- 513
Query: 458 ERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYREIEDEAKDLDRRA 510
+ + +E+ SL + ++++ Q R A+ +H ++ Y + ++ L A
Sbjct: 514 GQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQYQNMESRLIEEA 573
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 570
K K Q+V+ + A D LRD D+ + +KE E I + R
Sbjct: 574 ---KDKANQRVKAAMEEA--------DDILKSLRDMR-DQKGAEVKEHE----LIDQRKR 617
Query: 571 PDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
+D + + ++ G++V V S G K V+EV D++ V VQ G ++++
Sbjct: 618 LEDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMGIIKMK 675
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
+ P+ + ++K A P+ + +R T K LDLRG
Sbjct: 676 L------PLSDLEKKEKAKEQPKKVVTRTNR------------------STVKMELDLRG 711
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM- 742
R +EA LD L A + +++IHG GTG +++ V + L+ H VA Y P
Sbjct: 712 YRYDEAMVALDQYLDQAVLSNYEDVYIIHGKGTGALQKGVQQHLKRHKSVATYRGGMPSE 771
Query: 743 -NYGCTVAYIK 752
+G TVA +K
Sbjct: 772 GGFGVTVATLK 782
>gi|313893610|ref|ZP_07827179.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313441881|gb|EFR60304.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 812
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 200/701 (28%), Positives = 333/701 (47%), Gaps = 73/701 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 160
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
P + VP +I + R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNILLGTSYRILLITGSNTGG 355
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
H E+ L E+ RK + R E + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ +V+ + +++ ++QL + + D+ S I + I+ + H PD
Sbjct: 592 AEAMKRSLRVEGEAIIKQLKSQLSETNKDKRQSAINAARKGISNV---HVPDAPVDDDRK 648
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 638
++ + G+ V V +L L TV+ + G+ V + V+V ++ R N
Sbjct: 649 TLTAEEVKVGQVVFVTTL-RSLGTVLSMKGNRVNVDINGLTATVKVNELQSTTREEGNKL 707
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 EREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|366088425|ref|ZP_09454910.1| mutS family ATPase [Lactobacillus zeae KCTC 3804]
Length = 786
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 223/751 (29%), Positives = 361/751 (48%), Gaps = 95/751 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+ L L + L +L ++ +D + D AS +L IR + KR ++ + + +
Sbjct: 115 FRQLYTLQEELTALPQLSRRLKTAVDPDGTLT-DEASPELHGIREQIKRIESDIRNKMSE 173
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ Q+ + P++T R R + +KA+++ G+ + S++G T F+EP+ V
Sbjct: 174 YT-RGAQSKYLSDPIVTIRDDRYVIPVKAAYRSKF-GGVVHDQSATGQTLFVEPQAIVAL 231
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN +E AE +L+ L+ E+A +IK + D A+A A+
Sbjct: 232 NNRLREAQMAETAEVNRVLAELSNELAPYTGQIKANAAVLGHFDFINAKAKLAKNQKATE 291
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P++SS D+ + + +HPL+ + VG+
Sbjct: 292 PLVSS------DNDVLLRQARHPLI-----------------------DPHQVVGN---- 318
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ F
Sbjct: 319 --------DIPLGADYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIF 370
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
D + ADIGD QS+EQNLSTFS H+ IV IL+ +SR SLVL DE+G+GTDP EG ALA +
Sbjct: 371 DEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSRNSLVLFDELGAGTDPQEGAALAIA 430
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
IL + + V TTHY +L + NA+ EF +TL+PTYR+L G G SNA
Sbjct: 431 ILDAVGEIGAYVVATTHYPELKLYGYNTPKTINASMEFDSKTLQPTYRLLVGVPGRSNAF 490
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART-------A 485
+I+ +G + I+ RA+ ++ H + + L +R+ E+ A
Sbjct: 491 DISMRLGLPQPIVDRAKSMI-----SSDSHELNNMISDLERQRKAAENARAAAQRQLADA 545
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLR 544
+LH E+ D Y+ E R A +AKE + ++ A+V+ D +++ + QL
Sbjct: 546 QALHDELADAYKTFTTE-----RDAQLQQAKE--KANAMVDKAQVKADKIIKQLRQMQLT 598
Query: 545 DASADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
+ + + N LI +A A+ H+ P V G++V V S D+
Sbjct: 599 NPGSVKENQLI----AAKTALKRLHQDEPLQKNRVLRREREKQALHVGDEVKVASY-DQT 653
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
T++E D D VQ G ++++V + + + +K+ +A P ++ SG
Sbjct: 654 GTLLE-QFDKDHWQVQMGILKMKVPTSELEKVKPTKQASAQRPVVKV--------SGGGM 704
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
S GP +LDLRG R E+A LD I A + +IHG+GTG ++
Sbjct: 705 S-------GP-----STTLDLRGERYEQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIR 752
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
V + L+ H +V + +P N G + A I
Sbjct: 753 NGVTQYLKRHRQVKSFG-FAPQNAGGSGATI 782
>gi|386319584|ref|YP_006015747.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
gi|323464755|gb|ADX76908.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
Length = 782
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 216/730 (29%), Positives = 344/730 (47%), Gaps = 105/730 (14%)
Query: 39 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
C + D AS +L+ IR+ + + + + L ++ + ++T R R +
Sbjct: 142 CDTQDLFDSASMELQSIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNERNVIP 201
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
++A ++ +GI + S+SG T ++EP VE NN RL + E E IL+ LTAE+
Sbjct: 202 VRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAELTAEV 260
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A+ + +D +A +A + G P + + V + HPLL
Sbjct: 261 AEEAEACLISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF------HPLL- 313
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
D V I+ E + V+ITGPNT
Sbjct: 314 ----------------------------------DRDTVVANTIEFESSIQTVIITGPNT 339
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KTLGL LM+++GL +P + +L FD + DIGD QS+EQ+LSTFS H+
Sbjct: 340 GGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTFSSHMKT 399
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+ILE + +SL+L DE+G+GTDPSEG ALA SIL ++ L + TTHY +L
Sbjct: 400 IVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPELKAYSY 459
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
NA+ EF ++TL PTY++L G G SNA +I+K +G KII A+ ++
Sbjct: 460 NREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI-----G 514
Query: 459 RQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
+ + +E+ SL + ++++ Q R A+ +H ++ Y + ++ L A
Sbjct: 515 QDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQYQNMESRLIEEA- 573
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 571
K K Q+V+ + A D LRD D+ + +KE E I + R
Sbjct: 574 --KDKANQRVKAAMEEA--------DDILKSLRDMR-DQKGAEVKEHE----LIDQRKRL 618
Query: 572 DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
+D + + ++ G++V V S G K V+EV D++ V VQ G +++++
Sbjct: 619 EDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMGIIKMKL 676
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
P+ + ++K A P+ + +R T K LDLRG
Sbjct: 677 ------PLSDLEKKEKAKEQPKKVVTRTNR------------------STVKMELDLRGY 712
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM-- 742
R +EA LD L A + +++IHG GTG +++ V + L+ H VA Y P
Sbjct: 713 RYDEAMVALDQYLDQAVLSNYEDVYIIHGKGTGALQKGVQQHLKRHKSVATYRGGMPSEG 772
Query: 743 NYGCTVAYIK 752
+G TVA +K
Sbjct: 773 GFGVTVATLK 782
>gi|222151569|ref|YP_002560725.1| recombination and DNA strand exchange inhibitor protein
[Macrococcus caseolyticus JCSC5402]
gi|222120694|dbj|BAH18029.1| recombination and DNA strand exchange inhibitor protein homolog
[Macrococcus caseolyticus JCSC5402]
Length = 783
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 220/758 (29%), Positives = 358/758 (47%), Gaps = 101/758 (13%)
Query: 3 EQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN 62
E E ++H++ L ++ TEL E I C + D AS L IR E R
Sbjct: 119 ELEIPVMYHKFQQLPQV-------TELAESIQS--KCDETTLFDHASPKLSEIRQEMNRI 169
Query: 63 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
+ L+ + + ++T R R + +++ +K P GI + SSSG T+
Sbjct: 170 NRRIKERLESIVRSSNNQKKLSDAIVTIRNGRQVIPVRSEYKQDFP-GIVHDTSSSGQTF 228
Query: 123 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
++EP V+ + +++ E E IL LT E+A+ + + Y D + ++D+ A+A
Sbjct: 229 YIEPNSIVQLSTELSAVTHREQEEVERILYELTNEVAEYDNALTYSTDVLSDLDVLMAKA 288
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
+ V P +V ++++ G HPLL P + V+N+
Sbjct: 289 KYGNRNKMVMP------NVVNARTVDLPGAWHPLL----------------PADTVVKNN 326
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
+G +T+ V+ITGPNTGGKT ++KT GL LM+++G+ +P
Sbjct: 327 ISFIG-------------------DTQTVIITGPNTGGKTVTLKTTGLIILMTQSGMMIP 367
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A + FD + DIGD QS+EQ+LSTFS H++ IV IL+ ++ S V+ DE+G+GTD
Sbjct: 368 AAEGATISVFDEVFCDIGDEQSIEQSLSTFSSHMTNIVSILKEMTSNSFVMFDELGAGTD 427
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
PSEG ALA SIL ++ + + TTHY +L NA+ EF +ETL PTYR+L
Sbjct: 428 PSEGAALAMSILDRCLEQNVMTMATTHYPELKAYSYNRKHVMNASVEFDIETLSPTYRLL 487
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS-ELYQSLMEERRKLESQ 481
G G SNA +IAK +G II+ A+++++ E KS E ME+ R Q
Sbjct: 488 MGVPGKSNAFDIAKKLGLSPSIIKHARQMIQMDDVEIDNMIKSLESNAKQMEDDRIFTEQ 547
Query: 482 AR-TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 540
+ SLH+++ + + ++L RA Q + + A+ + D +++
Sbjct: 548 LKLEVQSLHSDLKKNFDSYLAQKENLIERAK-------QDANKIVKDAEKEADELLKTLR 600
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 600
N +A E N LI E S + + + D + +T + + G+ V V S G
Sbjct: 601 NLKSNADIKE-NELI-EKRSKLGEMYHETKIKAD----KKSTKNEVIEKGDHVKVLSYGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K +++V G + +VQ G +++++ P L K+
Sbjct: 655 K-GVILDVDGKE--AIVQMGIIKMKL------------------PLDELEKE-------- 685
Query: 661 AGSSNEEASYGPRV--QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
A +++ PR QT K LDLRG R E+A +L+ L A + + +IHG GT
Sbjct: 686 APPKEDKSRVVPRSNRQTIKMELDLRGERYEDALIKLEQYLDQALLSNYEQVTIIHGKGT 745
Query: 717 GVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
G +++ V + LR V+ + +P +G TV +K
Sbjct: 746 GALQKGVQQYLRRSKAVSSFRGGTPSEGGFGVTVVELK 783
>gi|257877500|ref|ZP_05657153.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
gi|257811666|gb|EEV40486.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
Length = 787
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 156
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 508
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 567
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 688 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 746 CTVAYI 751
A I
Sbjct: 778 GNGATI 783
>gi|167749635|ref|ZP_02421762.1| hypothetical protein EUBSIR_00593 [Eubacterium siraeum DSM 15702]
gi|167657388|gb|EDS01518.1| MutS2 family protein [Eubacterium siraeum DSM 15702]
Length = 793
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 210/711 (29%), Positives = 339/711 (47%), Gaps = 99/711 (13%)
Query: 46 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 154
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLMLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 454
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 455 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 514
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 515 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 570
KE Q V+ + + + Q D ++++ E + + + +K + S I + V
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHINSSVNGMY 621
Query: 571 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 688 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|308174555|ref|YP_003921260.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM 7]
gi|307607419|emb|CBI43790.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM
7]
Length = 785
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 220/741 (29%), Positives = 363/741 (48%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIVQNVEVLQTLDSIFAKARYAKAMKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYTTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVSILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + L + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKLMEEAEQKAAEKLEDAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEA-SH---QLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A SH LD A+ R + +IHG GTG +++ V ++L+NH V
Sbjct: 710 ---LDLRGERYENALSHVEKYLDDAVLAGYPR--VSIIHGKGTGALRKGVQDLLKNHRSV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KSSRFGEAGEGGSGVTIVELK 785
>gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. WCH70]
gi|259511159|sp|C5D5Q8.1|MUTS2_GEOSW RecName: Full=MutS2 protein
gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70]
Length = 784
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 226/752 (30%), Positives = 357/752 (47%), Gaps = 121/752 (16%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+++ I CID + +D ASE L IR + + R E L+++++ +AQ +
Sbjct: 129 LPEVQQAIERCIDDHGEV-MDHASERLRSIRQQLRTTEARVREKLENIIRSQSAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I IT R R + +K ++ + GI + S+SGAT F+EP+ VE NN
Sbjct: 188 AI----ITIRNDRYVIPVKQEYRGVY-GGIVHDQSASGATLFIEPQAVVELNNQLQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ LT+ +A+ + +D + ++D FA+A +A + P+++ + ++
Sbjct: 243 KEKREIERILTELTSIVAEHAEALLENVDILAQLDFIFAKAKYANKLKATKPVMNDRGYI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ D VP D
Sbjct: 303 RLLQA------RHPLI-----------------------------------DQDVVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KT+GL +LM++AGL++PA + L F + ADIGD
Sbjct: 322 IELGKDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELAVFRSVYADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILRNVDHESLVLFDELGAGTDPQEGAALAIAILDEVHGRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF ETLRPTY++L G G SNA I+K +G D
Sbjct: 442 ARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPGRSNAFEISKRLGLD 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSL--------------MEERRKLESQARTAAS 487
+II+RA+ + + ++ + L QS ME + +
Sbjct: 502 ERIIERAKSHIS-AESNKVENMIASLEQSKKRAEEEEKKAKEARMEAEKLRSDWEQKWEE 560
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH + ++ E + +A D+ R + +E +++ +EL ++Q + + E++L +A
Sbjct: 561 LHEKRDEIIEEAKRKAADIVRASQ----QEAERIIRELR--RMQKEKQAEIKEHELIEAK 614
Query: 548 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
K E AI + + + +F P G++V V SL K V +
Sbjct: 615 --------KRLEEAIPTLEKK-----KKERKKQTQHAFQP--GDEVKVTSLNQKGYLVEK 659
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V DD VQ G +++++ + ++ I S K P ++ + D G
Sbjct: 660 V--SDDEWQVQLGILKMKINERDLEYI-GSAPKTETKPLATVKGK--DYHVGL------- 707
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
LDLRG R E+A +L D LA + S+ IHG GTG +++
Sbjct: 708 ------------ELDLRGERYEDAIVRLEKYIDDALLAGYPRVSI---IHGKGTGALRKG 752
Query: 723 VLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
V E L+ H V + + + G T+ +K
Sbjct: 753 VQEFLKKHRSVKNFHFGEANEGGTGVTIVELK 784
>gi|313887962|ref|ZP_07821641.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846128|gb|EFR33510.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 791
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 196/670 (29%), Positives = 329/670 (49%), Gaps = 75/670 (11%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R V +K +K + G+ ++S SG T ++EP VE NN L E E
Sbjct: 193 IVTLRDGRYVVPVKIENKSRVK-GLVHDISGSGQTAYIEPMAVVEANNDLKELYIKENLE 251
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ + ++ EIK ++++E+D FA+A P L+ +
Sbjct: 252 IEKILKELSELVGETSEEIKSNQEKLIELDFIFAKARLGLNYRANMPKLNREGR------ 305
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
IN+ HP L + I+ VPIDI +
Sbjct: 306 INLIKAYHPFL--------------------------------DRKIA---VPIDINLGI 330
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ +++TGPNTGGKT S+KT+GL +LM++ GL +PA + F+ + ADIGD QS+E
Sbjct: 331 DFTSLIVTGPNTGGKTVSIKTVGLLTLMTQFGLLIPADEASEIAVFEKVFADIGDEQSIE 390
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H+ IV IL+ V+ SLVL DE+G+GTDP+EG ALA SI+ ++ +R +
Sbjct: 391 QSLSTFSSHMVNIVYILKNVTPNSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCIS 450
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
T+HY L NA+ EF +++L PTYR+L G G SNA I++ +G +II
Sbjct: 451 TSHYNQLKIYALTTDGVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPDEIIG 510
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+KL+ E + ++ QS+ E+R K+ A++ + ++ + K L
Sbjct: 511 EAKKLLSSENIEFE-----DVLQSIDEDRTKIREYREELEREKADLEKENKRLQSKIKKL 565
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
+ + + K ++ ++ L K +D ++ + N+ RD + E + I+E++ + +
Sbjct: 566 EDQKEKILEKSREEAKRLLLNTKENVDIILSEI-NEARDKISSENSKKIQEAQDLLRESI 624
Query: 567 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
+ R + +++ + G++V SLG+ LATV+E+P VLVQ G M++ +
Sbjct: 625 KNARDKSELEITKAANPIREIKVGDKVRT-SLGN-LATVLELPDKKGNVLVQSGIMKMNM 682
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
K+++ I + + N R+ K + K+ +D+RG
Sbjct: 683 PKDSLTRI-DVQEDTTKNNTRRILKN--------------------KATNVKSEIDIRGK 721
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPM 742
E+A +D L A + +IHG GTGV+++++ E RN + Y+ + +
Sbjct: 722 NFEDAKDIVDKYLDDAYLSGLKSVRIIHGKGTGVLRQKLREHFRNVKLIKSYKDAEYNEG 781
Query: 743 NYGCTVAYIK 752
G TV +K
Sbjct: 782 GDGVTVVTLK 791
>gi|386715018|ref|YP_006181341.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384074574|emb|CCG46067.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 781
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 221/747 (29%), Positives = 361/747 (48%), Gaps = 105/747 (14%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLL 70
L E++ L ELE+ I CID + ++D AS+ L IR+ R R E+ +DS
Sbjct: 117 LREIVTGILPLKELEQSIRSCID-EHGNVMDGASDKLRTIRS-RVRTYESRVRDKMDSFT 174
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
K + A ++T R R + +K ++ + GI + SSSGAT F+EP+ V
Sbjct: 175 KSKTKMLSDA------IVTIRNERYVLPVKQEYRGAI-GGIVHDQSSSGATLFIEPQSVV 227
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN E E IL L+ EIA + + R+ +D FARA + M
Sbjct: 228 DLNNQLQEARVQEKHEIEKILKELSEEIADHYSALYENVTRLGHVDFMFARAKLGKQMKA 287
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P ++ + + + +HPL+ N E V
Sbjct: 288 SMPSMNDEGRIKMLQA------RHPLI-----------------------NEEEVV---- 314
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
P DI++ + +VITGPNTGGKT ++K +GL +LM+++GL +PA + +
Sbjct: 315 --------PNDIEIGEDYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQIPALDGCEMA 366
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F+ + ADIGD QS+EQ+LSTFS H++ IVDIL+ V ++LVL DE+G+GTDP EG ALA
Sbjct: 367 VFEEVYADIGDEQSIEQSLSTFSSHMTNIVDILKHVDDKTLVLFDELGAGTDPQEGAALA 426
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL + +R + TTHY +L NA+ EF ++TL+PTYR+L G G SN
Sbjct: 427 MSILDEVVNRNARVIATTHYPELKAYGYNREGVINASVEFDIQTLKPTYRLLIGVPGRSN 486
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A I++ +G +I AQ E++ + Q + SL E +R E A L
Sbjct: 487 AFEISRKLGLHESVITSAQ---EKIGVDSQS--VENMIASLEESKRGAEQDYEEAERLLQ 541
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-----LRD 545
E DL E++++ +++ L K ++ ++ + A+ + +T+V + N +++
Sbjct: 542 EAQDLRNELKNKWDQFEQKREELYEKAEEKAEKAIRQAREEAETIVGEIRNMKSQAGMKE 601
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
E + E++ +A + +P+ V E + G++V + +L ++ T+
Sbjct: 602 HEWIEARKMFDEAQPELAKKKKESKPEPQKEVKELKS-------GDEVKLLTL-NQNGTI 653
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
VE G ++ VQ G M+V+ K+ ++ I +++ P ++ +
Sbjct: 654 VEQTGKNE-YQVQVGVMKVKAKRKDLEFI-KAEQPYKEKPMATVKGK------------- 698
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVK 720
G V+T LDLRG R E+A ++L D LA + + S +IHG GTG ++
Sbjct: 699 -----GYHVKT---ELDLRGERYEDALNRLEKYIDDALLAGYPTVS---IIHGKGTGALR 747
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCT 747
V +NH + + + MN G +
Sbjct: 748 TAVQNYAKNHRNITNH-RAGGMNEGGS 773
>gi|430882566|ref|ZP_19484114.1| MutS2 protein [Enterococcus faecium E1575]
gi|430556811|gb|ELA96306.1| MutS2 protein [Enterococcus faecium E1575]
Length = 786
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 351/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAKKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|212638407|ref|YP_002314927.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus WK1]
gi|212559887|gb|ACJ32942.1| DNA mismatch repair protein, MutSB [Anoxybacillus flavithermus WK1]
Length = 836
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 223/742 (30%), Positives = 364/742 (49%), Gaps = 101/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L ELE++I CID + +LD AS+ L +R + + R + L+S+++ +AQ
Sbjct: 181 LPELEQRIYHCID-ESGDVLDGASDRLRSLRHQLRTIEGRVRDKLESIIRSSSAQ----K 235
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K +++ GI + SSSGAT F+EP+ VE NN +L
Sbjct: 236 TLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELNNELQQLRV 294
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E ILS L+A + + I ++ + ++D FA+A +A+ + P ++ + ++
Sbjct: 295 KEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKPAINERGYI 354
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ P SD VP D
Sbjct: 355 RLIQA------RHPLI----------------P-------------------SDEVVPND 373
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F + ADIGD
Sbjct: 374 IELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFRAVYADIGD 433
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +IL + +R
Sbjct: 434 EQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAILDEVHNRG 493
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF +ETL PTY++L G G SNAL+I++ +G D
Sbjct: 494 ARVVATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGIPGRSNALDISRRLGLD 553
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II RA+ + + + + SL + +++ E + A L E L E+E
Sbjct: 554 EHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEQAEKLRQEAEQLRNELEK 608
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLI---KE 557
+ + + + L + ++ + + A + ++Q+ E Q + A + + LI K+
Sbjct: 609 QWTEFNEQQDRLLERAKEEAEFIVKKAMKTAEEIIQNLREMQKKQVIAMKEHELIDARKK 668
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
E AI I D + + + G++V V L K + +V D LV
Sbjct: 669 LEEAIPQI-------DTKKKKQAQKAKQSLHPGDEVKVIHLNQKGQLIEKV--SDKEWLV 719
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++V + N++ + ++PAP + A+ R
Sbjct: 720 QIGILKMKVDEENLQYV--------SSPAPI--------------ETKPIATVKGRDYHV 757
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E+A ++ D LA + S +IHG GTG +++ V + L+NH
Sbjct: 758 PLELDLRGERYEDALLRVEKYIDDAVLAGYPRVS---IIHGKGTGALRKGVQQYLQNHRS 814
Query: 733 VA--KYEQESPMNYGCTVAYIK 752
V ++ + + G T+ ++
Sbjct: 815 VKSIRFGEATEGGTGVTIVELQ 836
>gi|291548598|emb|CBL24860.1| MutS2 family protein [Ruminococcus torques L2-14]
Length = 791
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 222/722 (30%), Positives = 337/722 (46%), Gaps = 87/722 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---G 82
LT L +I CI I D S+D + +R++ N++ + +
Sbjct: 128 LTPLSNEIDRCI-----IGEDEYSDDASSTLKQIRRSINNINDKVHATLTTLVNGSLRTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +IT R R CV +KA ++ + G+ + SS+G+T F+EP V+ NN L
Sbjct: 183 LQDAIITMRGDRYCVPVKAEYRGQV-QGLIHDQSSTGSTLFIEPMAIVKLNNDLKELYAK 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ E A+ EI+ + ++D FAR A M P+L+ +
Sbjct: 242 EQEEIQVILANLSEEAAQYIEEIRVDYRSLTDLDFIFARGALAMSMRASRPLLNEEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
I I +HPLL +P K VPI +
Sbjct: 300 ----IRIREGRHPLL---------------DPKKV--------------------VPITV 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ + +++ITGPNTGGKT S+KT+GL LM ++GL++PA + L F I ADIGD
Sbjct: 321 TLGEDFTLLIITGPNTGGKTVSLKTVGLFCLMGQSGLHIPAGDRSELAVFHQIYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA SIL +L R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLKKVDERSLVLFDELGAGTDPTEGAALAISILSHLHQRGI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPD 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II+ A+K R Q +L L +R +E + A L E DL + +
Sbjct: 501 YIIEDAKK-----RLSEQDVSFEDLLTDLETSKRTIEKEQEEIARLKKEAEDLKAQAKQR 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-----ENQLRDASADEINSLIKE 557
+ LD + + + ++ L AK D ++DF EN E L K+
Sbjct: 556 QEKLDDQRDRILREANEKANAILREAKEIADKTIKDFRKFGKENISASEMEKEREKLRKK 615
Query: 558 -SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
++A A+ ++A +P E S F + GE V V S+ + TV +P +
Sbjct: 616 IKDTASASAMKAQKPK-----KEHKASDF--KLGESVKVLSM-NLTGTVSSLPDAKGNLT 667
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
V+ G + +V +++ I + + AP+ + +R S + S P +
Sbjct: 668 VRMGILSSQVNISDLEII-----EEVSPYAPK----KMNRTSKGKIKMGKSLSVRPEI-- 716
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
+L G V+EA +LD L A + + V+HG GTG +++ + E LR V
Sbjct: 717 -----NLLGRTVDEAVAELDKYLDDAILAHLNTVRVVHGKGTGALRKGIHEYLRRQKHVK 771
Query: 735 KY 736
Y
Sbjct: 772 SY 773
>gi|399888238|ref|ZP_10774115.1| recombination and DNA strand exchange inhibitor protein
[Clostridium arbusti SL206]
Length = 788
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 218/709 (30%), Positives = 353/709 (49%), Gaps = 84/709 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I DRAS +L IR + ++ S + + + + + + T R R + +KA +
Sbjct: 145 ISDRASTELFNIRKSLRDKTASVKSKVNSLVRSY--SNFLQENIYTIRGDRYVIPVKAEY 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ + SSSGAT F+EP G V NN + E AE IL L+ +I ++
Sbjct: 203 KAQVP-GLVHDQSSSGATLFIEPMGLVNLNNEIKEIMLKEKAEINRILQELSQKIYENIV 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ V E+D FA+A +A ++ + P V+ + I+I +HPL+
Sbjct: 262 VVENNASIVYELDFIFAKAKYASEINAIRP------GVNDNGIIDIVQGRHPLI------ 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K V +D+ + E +++TGPNTGGKT
Sbjct: 310 ---------DPEKV--------------------VAMDVYLGREFTSLIVTGPNTGGKTV 340
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV+I+
Sbjct: 341 TLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIM 400
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
SLVL DE+G+GTDP+EG ALA SIL+ LR+R V TTHY++L K
Sbjct: 401 GKADLTSLVLFDELGAGTDPTEGAALAVSILENLRERKTKLVATTHYSELKAYALKTEGV 460
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 461
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A+K + + L+ E
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDEARKGISSDTLKFE--- 517
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 518
+L QSL E+ K E AR + L E + + E++ L+ +A KE
Sbjct: 518 ----DLIQSLQEKSIKAEENARKSEMLKIEAEKIKEKYEEKLYSLNSSREKALSEGRKEA 573
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
+ + E AK + D ++++ R + E + +++ + ++ + ++ + S
Sbjct: 574 KGIIAE---AKEEADEILKNIRELERMGYSSETRAKLEKERRRLKESLD-NVEENMYKDS 629
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 638
+ + GE+V++ SL K V+ P + V +Q G M++ VK N + K
Sbjct: 630 SKENGLTSVKEGEEVYIPSLNMK-GIVLSQPDNRGEVQIQAGIMKINVKLKN---LTKGK 685
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 698
N+ + + K++E + + ++ +S+DLRGM EEA + +D
Sbjct: 686 GDNSRSKEAKKIKKREAKLN---------------LKQVDSSIDLRGMDGEEAMYNVDKY 730
Query: 699 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
L A + VIHG GTGV++ + ++L+ V Y NYG
Sbjct: 731 LDEAYLAGLKSVTVIHGKGTGVLRNVISDMLKRQHHVKSYRL---GNYG 776
>gi|425055377|ref|ZP_18458853.1| MutS2 family protein [Enterococcus faecium 505]
gi|403034046|gb|EJY45521.1| MutS2 family protein [Enterococcus faecium 505]
Length = 786
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHNDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVIIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|340755208|ref|ZP_08691905.1| MutS2 protein [Fusobacterium sp. D12]
gi|419840320|ref|ZP_14363712.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421499445|ref|ZP_15946489.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685859|gb|EFS22694.1| MutS2 protein [Fusobacterium sp. D12]
gi|386908352|gb|EIJ73049.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402269698|gb|EJU19022.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 778
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 215/760 (28%), Positives = 367/760 (48%), Gaps = 112/760 (14%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + ++ + L +E+ I +D + I D AS DL IR +K +N+
Sbjct: 112 KYKALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFD 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + ++T+R RM V +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFEEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L E E IL L+ +I + E+ + +L +D A+A F ++
Sbjct: 230 LNNKMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEA 287
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
C + + Q + +E +HP + +
Sbjct: 288 CHVPTIQGK----EILYLEKARHPFIPKEKV----------------------------- 314
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP+ ++ + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H ++ +
Sbjct: 315 ------VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGF 368
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LS+FS H++ + +IL V R LVL+DE+GSGTDP+EG A A
Sbjct: 369 FQGVFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAM 428
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SI+ YL+++ A++TTHY+++ + E A+ EF TL PTYR+L G G+SNA
Sbjct: 429 SIIDYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNA 488
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
L IAK +G + II +AQ + + ++K EL + +++++ + + AE
Sbjct: 489 LTIAKRLGVPQDIIDKAQSYIS------EDNKKIELMIN------NIKNKSESLDRMQAE 536
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI-DTVVQDFE---NQLRDAS 547
+ L R AA + ++ ++ ++ L K +I +D E N++R +
Sbjct: 537 LEGL------------REAARMNQQKWEEERRNLEREKNEILKKAYEDSEKMMNEMRAKA 584
Query: 548 ADEINSLIKESESAIAA---------IVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVK 596
+ I + KE S A + A + + + ++S T T F G++V VK
Sbjct: 585 SALIEKIQKEENSKEQAKQIQKNLNMLSSALKEEKNKTISITKTMKKKANFKEGDRVFVK 644
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
++ ++ A+V+++ ++ VQ G +++ V + IR K K R Q +
Sbjct: 645 NI-NQFASVLKINAMKESAQVQAGILKLEVPFDEIRVTEEKKEK---------RYQVQVH 694
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
+ + ++ +DLRG V+E H+L+ L A ++VIHG
Sbjct: 695 KKIAV----------------RSEIDLRGKMVDEGIHELETYLDRALLNGYHEIYVIHGK 738
Query: 715 GTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
GTG ++ +L+ L+ P V ++ GCTV +K
Sbjct: 739 GTGALRNGILDYLKTCPYVKEFRIGGHGEGGLGCTVVTLK 778
>gi|257897919|ref|ZP_05677572.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257835831|gb|EEV60905.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 786
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 218/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPRISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 513
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 514 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
K+ +V E +I ++ + Q+ + E N LI A +
Sbjct: 564 REKEIEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-NQLI----DAKTQLA 618
Query: 567 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLR 714
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 743 NYGCTVAYI 751
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|448238979|ref|YP_007403037.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|445207821|gb|AGE23286.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 792
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 217/717 (30%), Positives = 354/717 (49%), Gaps = 86/717 (11%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS+ L +R + + R E L+++++ +AQ + +IT R R + +
Sbjct: 154 VLDAASDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPV 209
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ GI + S+SGAT F+EP+ VE NN E E IL L+A++A
Sbjct: 210 KQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVA 268
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ + ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 269 EQAEPLARAVESLAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL-- 320
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D E + VP DI++ + +VITGPNTG
Sbjct: 321 ------------------DQEKA---------------VPNDIELGGDYTTIVITGPNTG 347
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 348 GKTVTLKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNI 407
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDIL V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 408 VDILRHVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGSRTVATTHYPELKAYGYN 467
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 468 RPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SA 522
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ H + SL +++ E + A + E L E E + ++L+ A A+ TQ
Sbjct: 523 ESHNVENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQ 582
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + A+ + + ++Q+ ++ A+ + E++ +AA A + ++
Sbjct: 583 KAADIIRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKKRLAA---AMPKVEKRKKAK 639
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
S Q G++V V SL K + +V DD VQ G +++++++ ++ I S
Sbjct: 640 KAASRHVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYI-GSAP 696
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
N P ++ + A S E LDLRG R E+A +L+ L
Sbjct: 697 ANDVTPIATVKGK-------DAHVSLE--------------LDLRGERYEDALLRLEKYL 735
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
A + + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 736 DDAVLAGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|293570971|ref|ZP_06682015.1| MutS2 family protein [Enterococcus faecium E980]
gi|430841856|ref|ZP_19459773.1| MutS2 protein [Enterococcus faecium E1007]
gi|431077718|ref|ZP_19495183.1| MutS2 protein [Enterococcus faecium E1604]
gi|431112285|ref|ZP_19497661.1| MutS2 protein [Enterococcus faecium E1613]
gi|431586437|ref|ZP_19520952.1| MutS2 protein [Enterococcus faecium E1861]
gi|431737011|ref|ZP_19525967.1| MutS2 protein [Enterococcus faecium E1972]
gi|291608955|gb|EFF38233.1| MutS2 family protein [Enterococcus faecium E980]
gi|430493674|gb|ELA69965.1| MutS2 protein [Enterococcus faecium E1007]
gi|430566133|gb|ELB05254.1| MutS2 protein [Enterococcus faecium E1604]
gi|430569239|gb|ELB08256.1| MutS2 protein [Enterococcus faecium E1613]
gi|430593615|gb|ELB31601.1| MutS2 protein [Enterococcus faecium E1861]
gi|430599387|gb|ELB37093.1| MutS2 protein [Enterococcus faecium E1972]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEKKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|164687641|ref|ZP_02211669.1| hypothetical protein CLOBAR_01283 [Clostridium bartlettii DSM
16795]
gi|164603415|gb|EDQ96880.1| MutS2 family protein [Clostridium bartlettii DSM 16795]
Length = 792
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 362/738 (49%), Gaps = 81/738 (10%)
Query: 15 PLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N + ++E++I I + I D AS L+ IR + +++ S L +
Sbjct: 117 PIIQALTNALYTFRDIEDRIYTSIVGESEI-SDNASTTLKTIRRRIVQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R + +KA ++ ++ GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDNIISMRGDRFVIPVKAEYRSVVS-GIVHDQSSSGATLFIEPMSIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A I + E+ + + ++D AFA+ + M + P
Sbjct: 235 NELRKLKLDEQEEIERILSELSAMIGEISGELISNQEILGKLDFAFAKGKLSVEMRAIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+L+ + + +I+ +HP++ K DV
Sbjct: 295 VLNEEKY------FHIKNGRHPMID-----------------KRDV-------------- 317
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP + + + +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 318 ----VPNTVYLGKDFDTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADFGTSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ V IL V+ +SLV+ DE+G+GTDP EG ALA +I
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNTVSILNEVTSDSLVIFDELGAGTDPVEGAALAIAI 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L ENAA EF ++TL PTYR+L G G SNA
Sbjct: 434 LEDVNMAGAKCIATTHYSELKNYALTKNGVENAAVEFDVDTLSPTYRLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
I+K +G +I RA++ + E + ++ Q++ + R K E A L EI
Sbjct: 494 ISKKLGLSEYVINRAKEFINTDNIELE-----DVLQNVEKNRLKAEEDRLEAEKLKKEIE 548
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE--- 550
D+ E E + + + + +K + AK Q + ++++ + ++ +
Sbjct: 549 DIKAEYEGRLERVMAQREKIISKAKSEAFSITRQAKEQSENILKELRKLETEMASKQKQQ 608
Query: 551 -INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
I +L KE ++ + + + VS P G+ V V +L ++ TVV V
Sbjct: 609 KIEALRKELSDSMGNLQPSVKSMIVPKVSSKEIKDLKP--GDDVKVVTL-NQDGTVVSVD 665
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
LVQ G M++ + P L++ Q+D++S ++ + S
Sbjct: 666 KKKKEALVQIGIMKMTL------------------PFKSLQQIQKDKKSTVTKTTRKIIS 707
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ K +DLRGM +EEA +++ L AC + +IHG+GTGV+K+ + +IL
Sbjct: 708 --EKSGKVKGEVDLRGMNLEEAIMEVEKYLDDACVAGLETVTIIHGIGTGVLKKGLQDIL 765
Query: 728 RNHPRVAKYEQESPMNYG 745
+ + V + + P YG
Sbjct: 766 KRNKHV---KSKRPGEYG 780
>gi|425059158|ref|ZP_18462510.1| MutS2 family protein [Enterococcus faecium 504]
gi|403036397|gb|EJY47747.1| MutS2 family protein [Enterococcus faecium 504]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|431752400|ref|ZP_19541083.1| MutS2 protein [Enterococcus faecium E2620]
gi|430613891|gb|ELB50890.1| MutS2 protein [Enterococcus faecium E2620]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 218/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 513
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 514 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
K+ +V E +I ++ + Q+ + E N LI A +
Sbjct: 564 REKEIEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-NQLI----DAKTQLA 618
Query: 567 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLR 714
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 743 NYGCTVAYI 751
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|302802119|ref|XP_002982815.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
gi|300149405|gb|EFJ16060.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
Length = 691
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 255/505 (50%), Gaps = 33/505 (6%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+ D AS +L R E+ L L+ ++ I + G + R+CV + +
Sbjct: 182 VKDSASPELRTARMEQASCERKLQELMTRIV--IDRLAGDPNGQVASLDGRLCVAVSTEN 239
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+P G+ L S+ G ++EP AV NN + E +L LT ++
Sbjct: 240 NSKVP-GLLLQSSAGGLVSYVEPSAAVALNNSLSQARADAAQAEYRVLDDLTTKLRPFLS 298
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN-----IEGIKHPLLL 218
+ +D V + D+ AR ++ + P +S+++ +EG +HPLLL
Sbjct: 299 NFSFTLDIVADFDVVLARGRYSSSIGATRPSFVHAERDESESTLDEFLVLLEGARHPLLL 358
Query: 219 GSSLRSLSAASSNSNP-------LKSDVENSEMTVGSLSKGIS-----------DFPVPI 260
+L A + N +KS S + + I+ PVPI
Sbjct: 359 EQHRGNLRDAKAKLNTKRKILNRMKSRAFTSAQDYQAAEEAITKAEEEVAELEASVPVPI 418
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
D ++ ET+VV ITGPNTGGKTA++KTLGLA LM++AGLY+ AK +PW D +LADIG
Sbjct: 419 DFLIKRETKVVTITGPNTGGKTAAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIG 478
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QSL Q+LSTFSGH+ RI I E + SLVL+DE+G+GTD EG AL ++L+
Sbjct: 479 DQQSLSQSLSTFSGHLLRIKRIKEESTSSSLVLLDEVGTGTDFVEGAALGMAMLESFAAG 538
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
L + TTH+ +L LK D RFENA+ EF E L+PTYR+LWG G SNALNIA +G
Sbjct: 539 SLLTLATTHHGELKMLKYSDDRFENASVEFDEEKLKPTYRLLWGIPGRSNALNIAARLGL 598
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
+II A+ L E +E+ +L + R+K E + L E YR +
Sbjct: 599 PEEIIMEARSLHGAANAEL-----NEVIMTLEQARQKFEHDLSKSQKLLGETRRHYRALS 653
Query: 501 DEAKDLD--RRAAHLKAKETQQVQQ 523
K+++ R+ A L A + V +
Sbjct: 654 IAQKEIEEYRKTAALDANDQLAVAE 678
>gi|227498526|ref|ZP_03928670.1| mutS2 family protein [Acidaminococcus sp. D21]
gi|226903982|gb|EEH89900.1| mutS2 family protein [Acidaminococcus sp. D21]
Length = 777
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 198/661 (29%), Positives = 322/661 (48%), Gaps = 87/661 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T R R + IK ++ P GI + SSSGAT F+EP V NN + E AE
Sbjct: 186 LVTMREDRYVIPIKQEYRLNFP-GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL LT+ + I + V ++DL A+A +A+ + P++ H+
Sbjct: 245 VERILRTLTSHVGAEADHILESLAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI--- 301
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
++G +HPLL S+ VP+DI++
Sbjct: 302 --VKG-RHPLLEQESI-----------------------------------VPLDIELGQ 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++ITGPNTGGKT ++KT+GL +LM++AGL+LPA+ P F + ADIGD QS+E
Sbjct: 324 DFTTLLITGPNTGGKTVALKTVGLFALMAQAGLFLPAE-EAIFPVFSGVYADIGDEQSIE 382
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFSGH+ ++ I+ + LVL+DE+ GTDP+EG ALA +++++ L ++
Sbjct: 383 QSLSTFSGHMKNMISIIREATDRDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIM 442
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L + +NA+ EF ETLRPTYR+L G G SNA I++ +G I+
Sbjct: 443 TTHYSELKTFAYEHEGMQNASVEFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILD 502
Query: 447 RAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A+ + ++H E + Q+L ERR+ ES+ +L E L +++ E
Sbjct: 503 EARTFIN------ERHSNMERVLQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTR 556
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
L++ + K + + A+ + ++++ Q + ++ L + S A++
Sbjct: 557 LEKSRNDILRKAREDADELYRNARRESQGILKELRAQQNLVESAKVERLAEMSRKALSK- 615
Query: 566 VEAHRPDDDFSVS------ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+FS+S +S G+ V VK+LG + + V G D TV +
Sbjct: 616 --------NFSISGRTEPEGQGLTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGV 666
Query: 620 GKMRVRVKK---NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
KM V +K +P+ K L+K S+GS +E + + Q
Sbjct: 667 MKMNVSMKDCILTKAQPVSPQKTHRT------LKK--------SSGSRHE--FFVKKAQD 710
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
+ D+RG V+EA +D A+ A ++HG GTG++++ +L+ L+ HP V
Sbjct: 711 TSVQTDVRGKTVDEAIPDVDKAIDDALLAGMDRFRLVHGKGTGMLRKGLLDYLKQHPNVE 770
Query: 735 K 735
K
Sbjct: 771 K 771
>gi|336234407|ref|YP_004587023.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
gi|335361262|gb|AEH46942.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 784
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 220/729 (30%), Positives = 346/729 (47%), Gaps = 109/729 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+++ I CID + LD ASE L IR + + R E L+S+++ +AQ
Sbjct: 129 LPEVQQAIERCIDDHGEV-LDHASERLRSIRQQLRTTEARVREKLESIIRSPSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + S+SGAT F+EP+ VE NN
Sbjct: 185 -LSDAIITIRNDRYVIPVKQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNQLQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ LT +A + + + ++D FA+A +A + P L+ + ++
Sbjct: 243 KEKREIERILTELTGIVAGHAEALLENVGILAQLDFIFAKAKYANKLKATKPALNDRGYI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ ++ VP D
Sbjct: 303 RLLQA------RHPLIDQEAV-----------------------------------VPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KT+GL +LM++AGL++PA + L F I ADIGD
Sbjct: 322 IELGKEYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELAVFRSIYADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVEILRDVDHESLVLFDELGAGTDPQEGAALAIAILDEVHGRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF ETLRPTY++L G G SNA I+K +G
Sbjct: 442 ARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPGRSNAFEISKRLGLA 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+II+RA +L + + + SL + +++ E + + A E L R+ E
Sbjct: 502 ERIIERA-----KLHISAESNNVENMIASLEQSKKRAEEELKKAEEARMEAEQLRRDWEQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ ++L + + + ++ + ++ + + ++ + ++ A+ IKE E
Sbjct: 557 KWEELHEKREEIIEEAKRKAADIVRSSQQKAERIIHELRRMQQEKQAE-----IKEHE-- 609
Query: 562 IAAIVEAHRPDDD---------FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++EA + + + T SF P G++V V SL K V +V D
Sbjct: 610 ---LIEAKKRLQEAMPTLEKKKKERKKQATHSFQP--GDEVKVISLNQKGYLVEKV--SD 662
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
D VQ G +++++ + ++ I S K P ++ + D G
Sbjct: 663 DEWQVQLGILKMKINERDLEYI-GSAPKTETKPLATVKGK--DYHVGL------------ 707
Query: 673 RVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
LDLRG R E+A +L D LA + S+ IHG GTG +++ V E L
Sbjct: 708 -------ELDLRGERYEDALARLEKYIDDALLAGYPRVSI---IHGKGTGALRKGVQEFL 757
Query: 728 RNHPRVAKY 736
+ H V +
Sbjct: 758 KTHRAVKSF 766
>gi|423521564|ref|ZP_17498037.1| MutS2 protein [Bacillus cereus HuA4-10]
gi|401177766|gb|EJQ84953.1| MutS2 protein [Bacillus cereus HuA4-10]
Length = 786
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 220/728 (30%), Positives = 349/728 (47%), Gaps = 105/728 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
++I RA+ + + + E + E +S ER++ E + + LH E+ E
Sbjct: 502 DRVIDRARNHISTDTNKIENMIAKLEESQKSAEHERKEAEEHRKQSEKLHRELQRQIIEF 561
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKE 557
DE R LKA+ ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 562 NDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEA 613
Query: 558 S---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPG 610
E A +V+ + N + P+ G++V V + G K + +V
Sbjct: 614 KSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS- 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 664 -DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 ---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLK 760
Query: 729 NHPRVAKY 736
H V Y
Sbjct: 761 KHRGVKNY 768
>gi|399924139|ref|ZP_10781497.1| MutS2 family protein [Peptoniphilus rhinitidis 1-13]
Length = 790
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 211/721 (29%), Positives = 355/721 (49%), Gaps = 93/721 (12%)
Query: 44 ILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
I D AS +L IR A++K +++N L+ +L QA + ++T R R V +
Sbjct: 151 IADDASRELLRIRRGIADKKNSIKNKLNGILNN------QANYLQDAIVTLRDGRYVVPV 204
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K +K + G+ ++SSSG T ++EP VE NN L E AE IL L+ +A
Sbjct: 205 KIENKSRVR-GLVHDISSSGQTAYIEPMSVVEANNELKELYIKENAEIEKILRELSELVA 263
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+S IK D+++E+D FA+A P ++ D IN+ HP L
Sbjct: 264 ESSEYIKSNQDKLIELDFIFAKARLGIKYHANMP------KINKDGRINLIRAYHPFL-- 315
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ I+ VPIDI + + ++ITGPNTG
Sbjct: 316 ------------------------------DRKIA---VPIDINLGIDFSSLIITGPNTG 342
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL SLM++ GL +P + + F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 343 GKTVSLKTVGLLSLMTQYGLLIPCEESSEIAIFEKVFADIGDEQSIEQSLSTFSSHMVNI 402
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V L+ V++ SLVL DE+G+GTDP+EG ALA +I++ + R + TTHY L
Sbjct: 403 VYTLKNVTKNSLVLFDELGAGTDPTEGAALARAIMESMLKRNIRCISTTHYNQLKVFALT 462
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF +++L PTYR+L G G SNA I++ +G +II+ ++KL+ E
Sbjct: 463 TDGVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPNEIIEESKKLLSSENIEF 522
Query: 460 QQHRKSELYQSLMEERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ ++ QS+ ++R K+ E R L E +++E + ++L+ + +
Sbjct: 523 E-----DVLQSIDKDRTKIREYKEELEREKRDLEIE----NKKLEGKIRNLEDQREKILE 573
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
K ++ ++ L AK +D ++ + N+ +D E + I+E++ + ++ R + +
Sbjct: 574 KSREEAKRILLNAKENVDIILSEI-NEAKDNINSENSKKIQEAQDLLRESLKNSRNNSEL 632
Query: 576 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
+ + + G++V SLG+ +ATV+E+P VLVQ G M++++ K ++ I
Sbjct: 633 EIKKAVNPIREIKVGDKVRT-SLGN-VATVIELPDSKGNVLVQSGIMKMKLPKESLTRID 690
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
QED N + + K+ +D+RG ++A +
Sbjct: 691 ----------------VQED-----TTKHNTKKILKSKATNVKSEIDIRGKNFDDAKDIV 729
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ L A + +IHG GTGV+++++ E + + ++ Q + G TV +
Sbjct: 730 EKYLDDAYLSGLKSVRIIHGKGTGVLRKKLREYFKQIKIIESFKDAQYNEGGDGVTVVTL 789
Query: 752 K 752
K
Sbjct: 790 K 790
>gi|390956087|ref|YP_006419844.1| mismatch repair ATPase [Terriglobus roseus DSM 18391]
gi|390411005|gb|AFL86509.1| mismatch repair ATPase (MutS family) [Terriglobus roseus DSM 18391]
Length = 818
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 345/726 (47%), Gaps = 97/726 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+ D AS +L IR R + ++ L++ + AGG + LIT R R + +KA
Sbjct: 155 LADSASPELARIRKAMDRQHKAIEESLRRQLRAVSDAGGTQEDLITIRGERFVIPVKAEF 214
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ +P G+ SSSG T F+EP +EFNN VRL + E +E IL +T + +
Sbjct: 215 RRKVP-GVIHGSSSSGQTVFVEPMETIEFNNELVRLMDEEQSEIHRILISMTQAVGEQAG 273
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+ + + E++ FA A FAQ +D V PI + D+++++E +HP+L
Sbjct: 274 SLSRGTEVLAEVEAHFAYAKFAQDLDCVRPIFTDGKPHGDDAALSLEAARHPML------ 327
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
L+ E +++ VP+ + + + ++I+GPNTGGKT
Sbjct: 328 ----------ELRMRSEKAKI-------------VPLTLGLPGVAKQLIISGPNTGGKTV 364
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++AGL +PAK RLP F + ADIGD QS+E+NLSTFS HIS + I
Sbjct: 365 ALKTVGLLALMAQAGLPVPAK-LARLPIFAAVYADIGDAQSIERNLSTFSAHISHVNQIA 423
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
SLVL+DE+GS TDP EG ALA +I + +++TTH L K
Sbjct: 424 READPRSLVLLDELGSATDPEEGAALAVAISERFLTMGAWSMITTHLTSLKIYAAKHDGV 483
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
NAA F TL PTY + G G S+ +NIA+ +G D +I A+ V +
Sbjct: 484 VNAAVGFDERTLAPTYELRMGVPGASSGINIAERLGLDAGMISAARASV--------TTQ 535
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
+++ + L E +L + + A + A REI +DR L+++ + +Q
Sbjct: 536 SADIARFLDELHTQLTAVGKERAEIRA------REIA-----VDRERQRLESEGKVEQRQ 584
Query: 524 ELNFAKVQIDTVVQDFENQLRD---------------ASAD-EINSLIKESESAIAAIVE 567
+V++ +++++FE Q+R+ A AD I L +E + + +V
Sbjct: 585 RARELEVKLGSLMKEFEFQMRESVKGIEDKSAQRKASAEADRRIARLKREFQESFNQVVV 644
Query: 568 AHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
AH S ++ + P G+ V +KS+G + VE D T V G
Sbjct: 645 AH-----VSGADKKDPAAQPHVVREVSVGDTVLLKSMGRE--AKVERVIDAKTFEVSIGP 697
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
M++RV K++I + PAP+ Q Q+ S N A V N +
Sbjct: 698 MKMRVPKDDIAKV--------TVPAPK----QSPIQAASKRGINVVAREPDMVPGEINVI 745
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
G +EA +++ L A R + V+HG G G+++ + E L+ HP V E
Sbjct: 746 ---GRTADEARDEVERFLDQAFLAGRGTIRVVHGTGMGILRRSLREYLKKHPHVIGV-TE 801
Query: 740 SPMNYG 745
P N G
Sbjct: 802 PPYNEG 807
>gi|293378174|ref|ZP_06624343.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
gi|292643038|gb|EFF61179.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
Length = 786
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 350/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ N E V P DI + + + +VITGP
Sbjct: 311 I-----------------------NQEKVV------------PNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ V+IL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVEILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|269837731|ref|YP_003319959.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
gi|269786994|gb|ACZ39137.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
Length = 800
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 239/446 (53%), Gaps = 50/446 (11%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDS 68
Y L E ++ L LE +G + + I LD ASE L IR E +R ++ L+
Sbjct: 116 YPNLSEFVEAIADLAGLEADLGRTVGPRGEI-LDTASERLAEIRREVRIAHRRLLDRLNR 174
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+L A AG I ++T R R + ++A + +P G+ S+SG T F+EP
Sbjct: 175 MLTDAA----YAGAIQDAIVTMREGRYVIPVRADRRAQIP-GVVHATSASGQTLFVEPMA 229
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
VE NN L +E E AIL + +IA + ++ ++ V IDLA A+A A M
Sbjct: 230 VVELNNRWRELQMAEEHEIEAILRARSDQIAAAADDLDQTVEAVAAIDLALAKARLAFSM 289
Query: 189 DGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
V PIL S I++ +HPLL +P
Sbjct: 290 RAVEPILVEASGPGAPGGHPRHRIDLRQARHPLL---------------DP--------- 325
Query: 244 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 303
D VPID+++ R++V+TGPNTGGKT ++KT+GL +LM++ GL++PA
Sbjct: 326 -----------DTVVPIDVRIGETYRILVVTGPNTGGKTVALKTVGLLTLMAQTGLFIPA 374
Query: 304 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 363
+ L F + ADIGD QS+EQ+LSTFS H+++I+ +L +SLVL+DEIG+GTDP
Sbjct: 375 ADGSALSVFSAVYADIGDEQSIEQSLSTFSAHVTKIIAMLRSADADSLVLLDEIGAGTDP 434
Query: 364 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
EG ALA +I+ L +R +A+VTTHY++L ENA+ EF L L PTYR+L
Sbjct: 435 QEGSALARAIISALLERGVIAMVTTHYSELKAFAYVTEGTENASVEFDLRNLSPTYRLLL 494
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQ 449
G G SNAL IA+ +G R++I+ A+
Sbjct: 495 GVAGQSNALAIAERLGMPREVIEAAR 520
>gi|312109983|ref|YP_003988299.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
gi|311215084|gb|ADP73688.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
Length = 784
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 220/729 (30%), Positives = 346/729 (47%), Gaps = 109/729 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L E+++ I CID + LD ASE L IR + + R E L+S+++ +AQ
Sbjct: 129 LPEVQQAIERCIDDHGEV-LDHASERLRSIRQQLRTTEARVREKLESIIRSPSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + S+SGAT F+EP+ VE NN
Sbjct: 185 -LSDAIITIRNDRYVIPVKQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNQLQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ LT +A + + + ++D FA+A +A + P L+ + ++
Sbjct: 243 KEKREIERILTELTGIVAGHAEALLENVGILAQLDFIFAKAKYANKLKATKPALNDRGYI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ ++ VP D
Sbjct: 303 RLLQA------RHPLIDQEAV-----------------------------------VPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KT+GL +LM++AGL++PA + L F I ADIGD
Sbjct: 322 IELGKEYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELAVFRSIYADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVEILRDVDHESLVLFDELGAGTDPQEGAALAIAILDEVHGRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L NA+ EF ETLRPTY++L G G SNA I+K +G
Sbjct: 442 ARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPGRSNAFEISKRLGLA 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+II+RA +L + + + SL + +++ E + + A E L R+ E
Sbjct: 502 ERIIERA-----KLHISAESNNVENMIASLEQSKKRAEEELKKAEEARMEAEQLRRDWEQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ ++L + + + ++ + ++ + + ++ + ++ A+ IKE E
Sbjct: 557 KWEELHEKREEIIEEAKRKAADIVRSSQQKAERIIHELRRMQQEKQAE-----IKEHE-- 609
Query: 562 IAAIVEAHRPDDD---------FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
++EA + + + T SF P G++V V SL K V +V D
Sbjct: 610 ---LIEAKKRLQEAMPTLEKKKKERKKQATHSFQP--GDEVKVISLNQKGYLVEKV--SD 662
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
D VQ G +++++ + ++ I S K P ++ + D G
Sbjct: 663 DEWQVQLGILKMKINERDLEYI-GSAPKTETKPLATVKGK--DYHVGL------------ 707
Query: 673 RVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEIL 727
LDLRG R E+A +L D LA + S+ IHG GTG +++ V E L
Sbjct: 708 -------ELDLRGERYEDALARLEKYIDDALLAGYPRVSI---IHGKGTGALRKGVQEFL 757
Query: 728 RNHPRVAKY 736
+ H V +
Sbjct: 758 KTHRAVKSF 766
>gi|357054690|ref|ZP_09115771.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
gi|355383994|gb|EHG31065.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
Length = 812
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 232/769 (30%), Positives = 362/769 (47%), Gaps = 91/769 (11%)
Query: 4 QECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK--- 60
+E G + L L LT L +I CI + + D AS L +R K
Sbjct: 115 RETGESQDDFDSLEPLFAGLEPLTPLNSEIKRCILSEDEVA-DDASPGLSHVRRSMKVTA 173
Query: 61 -RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 119
R L+S+L + + A +IT R R C+ +K+ +K + G+ + S++G
Sbjct: 174 DRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATG 226
Query: 120 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 179
+T F+EP + NN L E E A+L+ L+ + A E++ M+ + ++D F
Sbjct: 227 STLFIEPMAIIRLNNEMRELEIQEQKEIEAVLASLSNQAAPYTEELRMDMELLAQLDFIF 286
Query: 180 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 239
A+AG A+ P+ + + I+I+ +HPLL NP
Sbjct: 287 AKAGLARHYKCSAPMFNDKG------CIHIKDGRHPLL---------------NP----- 320
Query: 240 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 299
F VPI++ + E ++++TGPNTGGKT S+KT+GL +LM ++GL
Sbjct: 321 ---------------QFVVPINVWLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGL 365
Query: 300 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 359
++PA L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G+
Sbjct: 366 HIPAWEGSELAVFDQVFADIGDEQSIEQSLSTFSAHMTNIVRILSEADSRSLCLFDELGA 425
Query: 360 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 419
GTDP+EG ALA +IL +L + + TTHY++L ENA EF++ETL+PTY
Sbjct: 426 GTDPTEGAALAIAILSFLHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLQPTY 485
Query: 420 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 479
R+L G G SNA I++ +G II A+ + E + +L SL R +E
Sbjct: 486 RLLIGIPGKSNAFAISQKLGLPGYIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIE 540
Query: 480 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
+ + EI L + + + LD R + T++ Q+ L AK D ++
Sbjct: 541 KEQAEINAYKDEIASLKTRLTQKEERLDERKDKILKNATEEAQRILREAKETADQTIKQI 600
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVH 594
N+L +S + KE E+ A + + + D+ +V S +P + G+ V
Sbjct: 601 -NKLAASSG-----MGKELEAERARLRDQLKKTDEKLAVKPKGPSQPISPKKLKIGDGVK 654
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
V S+ K TV +P + VQ G +R V NIR + K+ +
Sbjct: 655 VLSMNLK-GTVSTLPNAKGDLYVQMGILRSLV---NIRDLELLNEKD-------ISATLG 703
Query: 655 DRQSGSAG--SSNEEASYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL--ACWESR 705
D S S G ++ + S +++ SK+S ++L GM V+EA ++ L A
Sbjct: 704 DGSSISYGGKTARGKGSGSSQIKMSKSSTVSAEVNLIGMTVDEAVPAMEKYLDDAYLAHL 763
Query: 706 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ V+HG GTG +K V + LR V ++ Q + G TV K
Sbjct: 764 QTVRVVHGRGTGALKNAVHKRLRQLKYVKEFRLGQFGEGDSGVTVVTFK 812
>gi|423673678|ref|ZP_17648617.1| MutS2 protein [Bacillus cereus VDM062]
gi|401310543|gb|EJS15859.1| MutS2 protein [Bacillus cereus VDM062]
Length = 786
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 224/737 (30%), Positives = 356/737 (48%), Gaps = 100/737 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDK 601
+ + LI+ E A +V+ + V NT+ + G++V V + G K
Sbjct: 602 LINVKDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQK 655
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASV 700
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
+ S LDLRG R E+A +++ L A S + +IHG GTG +
Sbjct: 701 KGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGAL 751
Query: 720 KERVLEILRNHPRVAKY 736
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKTY 768
>gi|440781736|ref|ZP_20959964.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
gi|440220454|gb|ELP59661.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
Length = 788
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 334/667 (50%), Gaps = 84/667 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+ T R R + +KA +K +P G+ + SSSGAT F+EP G V NN + E AE
Sbjct: 186 IYTIRGDRYVIPVKAEYKAQVP-GLVHDQSSSGATLFIEPIGLVNLNNEIKEIMLKEQAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+ IL L+ ++ ++ ++ V E+D FA+A +A ++ + P V+ +
Sbjct: 245 ISRILEELSQKVYENIVLVENNASIVYELDFIFAKAKYASRINAINP------AVNDNGI 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+I +HPL+ NP K V +D+ +
Sbjct: 299 IDIVQGRHPLI---------------NPEKV--------------------VAMDVYLGR 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ +V+TGPNTGGKT ++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+E
Sbjct: 324 DFTSLVVTGPNTGGKTVTLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV+I+ SLVL DE+G+GTDP+EG ALA +IL+ LR+R
Sbjct: 384 QSLSTFSSHMTNIVNIMGKADSNSLVLFDELGAGTDPTEGAALAVAILENLRERNTKLAA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L K ENA+ EF +ETL+PTYR+L G G SNA I+K +G II
Sbjct: 444 TTHYSELKAYALKTEGVENASVEFDVETLKPTYRLLIGIPGKSNAFEISKRLGLPDYIID 503
Query: 447 RAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
A+K + + L+ E +L Q+L E+ K E AR + L E + + E++
Sbjct: 504 EARKGISSDTLKFE-------DLIQTLQEKSIKAEENARRSEMLKNEAEKIKEKYEEKLY 556
Query: 505 DLD---RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
L+ +A + +E + + E AK + D ++++ R + + ++E
Sbjct: 557 SLNSSREKALNEGRREAKNIIAE---AKEEADRILKNIRELERMGYSSGTRAKLEEERKK 613
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ +E + + S+ + + GE+V++ SL K V+ P V +Q G
Sbjct: 614 LKENLE-NAEESALKNSQNHKGLNRVKEGEEVYIPSLNMK-GIVLSQPDSKGEVQIQAGI 671
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
M++ VK ++ + K + N ++RK+ EA R S S
Sbjct: 672 MKINVK---LKDLSKGKENTSINKELKKIRKR--------------EAKLNLRQVAS--S 712
Query: 681 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
+DLRGM EEA + +D L A + + +IHG GTGV++ + ++L+ H + Y
Sbjct: 713 IDLRGMDGEEAMYNVDKYLDEAYLAGLNSVTIIHGKGTGVLRNVISDMLKRHKHIKSYRL 772
Query: 739 ESPMNYG 745
NYG
Sbjct: 773 ---GNYG 776
>gi|336114602|ref|YP_004569369.1| MutS2 family protein [Bacillus coagulans 2-6]
gi|335368032|gb|AEH53983.1| MutS2 family protein [Bacillus coagulans 2-6]
Length = 741
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 227/751 (30%), Positives = 355/751 (47%), Gaps = 96/751 (12%)
Query: 15 PLLELLKNCN---FLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLD 67
P+L L + LT LE I +D I LD ASE L IR +R E L+
Sbjct: 72 PILTLTSMADRIAVLTPLEHDIRNAVDENGEI-LDTASETLRQIRHGLRGTERRIREKLE 130
Query: 68 SLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
++ K AA++ + +IT R R + +K ++ GI + SSSG T F+EP
Sbjct: 131 GYIRGKNAAKM-----LSDAIITIRNDRYVIPVKQEYRANY-GGIVHDQSSSGQTLFIEP 184
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
+ V+ NN E E ILS L+A +A + E+ +++ + + D FA+A + +
Sbjct: 185 QSVVDLNNQLREWHLKEQQEIERILSELSAAVAAAGGELNTIVEILADFDFMFAKALYGR 244
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G P++++ +I + +HPLL P
Sbjct: 245 SIKGSKPVINNHG------AIRMFKARHPLL----------------P------------ 270
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+D VP DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA +
Sbjct: 271 -------ADKVVPNDITLGQDYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDG 323
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+ F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V +SLVL DE+G+GTDP EG
Sbjct: 324 SEMAVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEG 383
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL + R V TTHY +L NA+ EF +ETL PTYR+L G
Sbjct: 384 AALAISILDEVYKRGARVVATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVP 443
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA I++ +G +I AQ L+ E + + +L RR+ E + + A
Sbjct: 444 GRSNAFEISRRLGLSPSVIAHAQSLIGADTNEVEN-----MIAALESARREAEKERQEAQ 498
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L + L+ +++ + + R L K ++ + + AK + + +++D ++
Sbjct: 499 KLLEDAEGLHHDLQKQMRQFYARRDELYGKAEKKAAKVVEEAKEKAEEIIRDLRKMQLES 558
Query: 547 SADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
A+ +KE E A +E P D + Q G++V V S K +
Sbjct: 559 KAN-----VKEHELIDARKQLEELAPKLDRKPAAKAKKQHVYQPGDEVKVLSFNQKGTLL 613
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+ G + LVQ G ++++VK++++ I P +KQ E + G +
Sbjct: 614 EQTAGGE--WLVQMGILKMKVKESDMEYI-----------RPPQQKQPEKHLATVRGRDS 660
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 721
+ LDLRG R E+A +D AL R + +IHG GTG ++
Sbjct: 661 HVSL----------ELDLRGERYEDALLKVEKYIDDALLAGYPR--VSIIHGKGTGALRN 708
Query: 722 RVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
V E L++H V + P G V ++
Sbjct: 709 GVQEFLKHHRAVKRIRLGEPGEGGSGVTIVE 739
>gi|225026876|ref|ZP_03716068.1| hypothetical protein EUBHAL_01130 [Eubacterium hallii DSM 3353]
gi|224955800|gb|EEG37009.1| MutS2 family protein [Eubacterium hallii DSM 3353]
Length = 791
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 224/724 (30%), Positives = 334/724 (46%), Gaps = 124/724 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR E K+ ++ + L V + LIT R R CV +K +
Sbjct: 145 ISDDASSALKDIRREIKQTNISIHNKLTSVINSQNNKTMLQDALITVRNGRYCVPVKTEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P G+ + SSSG+T F+EP V+ NN L E E IL L+A+ A R
Sbjct: 205 RNAFP-GMIHDQSSSGSTLFIEPMAVVQLNNHLKELDIKEKMEIEKILQSLSAQAASCSR 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E++ + ++D FA+A +A+ G PI ++ D ++I+ +HPLL
Sbjct: 264 ELEENQKILTKLDFIFAKAKYAKEYQGTEPIFNT------DGIVDIKQGRHPLL------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K VPI I + + ++++TGPNTGGKT
Sbjct: 312 ---------DPKKV--------------------VPIHIYIGEDFNMLLLTGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL LM +AGL++PA RL F I ADIGD QS+E NLSTFS H++ +V IL
Sbjct: 343 SLKTVGLFQLMGQAGLHIPAFQGSRLAVFSDIFADIGDEQSIEMNLSTFSSHMTNLVHIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ SLVL+DE+ GTDP+EG ALA +IL L V TTHYA+L
Sbjct: 403 DEADPNSLVLLDELCGGTDPTEGAALAIAILDDLHTGKIRTVATTHYAELKMYAMDTPGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF LETL PTYR+L G G SNA +I++ +G II++A
Sbjct: 463 ENACCEFDLETLSPTYRLLIGIPGKSNAFSISERLGLPDYIIEQA--------------- 507
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
R ++++ A ++ +E+ EIE E +L K Q+++
Sbjct: 508 -----------RSQIDATAIDFENMLSELEKNKAEIEKEQSEL--------YKTKQEIEN 548
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI-----------------V 566
N K + D + + + LRDA + N L + E A +I +
Sbjct: 549 LKNSLKEKQDDIKEKRDKMLRDAREEARNILEEAKEVADESIRKYHAWGQHPKQNNMKKM 608
Query: 567 EAHRPD--------DD---FSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDD 613
EA R D D + +++T S F G+ V V +L TV E D
Sbjct: 609 EAQRSDLRGRMSKLDKKLAYKAKKSSTISDPSDFKVGDSVFVTTLSLN-GTVKEAANKDG 667
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
+++Q G + V N+ + A AP+ + Q +DR S N+ A+ P
Sbjct: 668 DLVIQMGFLSSVVNYKNLELL-------APEKAPKPQHQPKDRY-----SINKAATINPE 715
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ N++D R+E+ LD A+ + + V+HG GTG +++ + E LR V
Sbjct: 716 INLLGNTVDEAIARLEK---YLDDAMIA--GLTSVRVVHGKGTGALRKGIHEYLRKLKFV 770
Query: 734 AKYE 737
Y+
Sbjct: 771 KSYK 774
>gi|340758447|ref|ZP_08695034.1| MutS2 protein [Fusobacterium varium ATCC 27725]
gi|251836770|gb|EES65304.1| MutS2 protein [Fusobacterium varium ATCC 27725]
Length = 778
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 226/773 (29%), Positives = 380/773 (49%), Gaps = 134/773 (17%)
Query: 10 FHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL--- 66
++Y L + + L +E+ I ID I D AS DL IR +K N+
Sbjct: 110 LNKYKDLRDKFNDVPILRGVEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIKRK 168
Query: 67 -DSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
D L + A++FQ + +IT+R R V +KA K + GI + SSSG T F+
Sbjct: 169 FDELFNEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTVFI 222
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP V NN L E E IL +T I ++ +I + + ++ +D+ ARA +
Sbjct: 223 EPLSIVALNNKNRELEIKEKEEIRKILLRITDYIRNNKDDIDKVGEAIITLDILNARAMY 282
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
V P ++++ ++ IE +HP + SS+
Sbjct: 283 GIEKKCVVPNINNREILTL-----IEA-RHPFIPISSV---------------------- 314
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
VP+ ++ + ++ITGPNTGGKT ++KT GL +LM+ +G+ +PA
Sbjct: 315 -------------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPAH 361
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
H + +F + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP+
Sbjct: 362 EHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTKASLVLLDELGSGTDPT 421
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG A A +++ YL+D+ +++TTHY+++ + E A+ EF++ETL PTYR+L G
Sbjct: 422 EGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLLIG 481
Query: 425 STGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE-LY 468
G+SNAL IA+ +G ++I +A +K++ ++ + + ++ E L
Sbjct: 482 IPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDVMKKQVEFLK 541
Query: 469 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQQE 524
++ ++ E + R L E D+ +E ++A K++ +AA L +++Q+E
Sbjct: 542 EAAQRDKEAFEEKLRI---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQKE 594
Query: 525 LNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
N K I V + N LR A +D+ ++I++ + A DF V
Sbjct: 595 DN-KKEDIKNVQKSL-NMLRSALQSDKSKTVIEKPKVARKV---------DFKV------ 637
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 643
GE+V V SL ++ A V+++ +T VQ G +++ V ++++ + K+K
Sbjct: 638 ------GERVFVNSL-NQFANVLKINLSKETTQVQAGILKLEVSLDDVKVVEEKKQK-VY 689
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 701
N S+ + ++ +DLRG V+EA ++L+ L A
Sbjct: 690 N------------------------SFSHKKTAVRSEIDLRGKMVDEAVYELETYLDRAI 725
Query: 702 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
S + ++VIHG GTG ++E +L L+ P V +Y GCTV +K
Sbjct: 726 MNSYNEVYVIHGKGTGALREGILNYLKKCPYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|291087888|ref|ZP_06347777.2| MutS2 protein [Clostridium sp. M62/1]
gi|291073610|gb|EFE10974.1| MutS2 family protein [Clostridium sp. M62/1]
Length = 818
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 202/673 (30%), Positives = 324/673 (48%), Gaps = 81/673 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA HK +P G+ + S++G+T F+EP + NN L E E
Sbjct: 188 VITMRDGRYCLPVKAEHKNQVP-GMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKRE 246
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+L L++++ + + + +D FA+A ++ + P +++ +
Sbjct: 247 IEFVLMALSSQLVPYTETLAENLSILARLDFIFAKASLSRHFNCTEPKFNNRRY------ 300
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
INI+ +HPLL +P K VPI+I +
Sbjct: 301 INIKDGRHPLL---------------DPKKV--------------------VPINIYLGD 325
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L FD + ADIGD QS+E
Sbjct: 326 SFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFADIGDEQSIE 385
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA ++L +L + +
Sbjct: 386 QSLSTFSAHMTNIVSILNEADSNSLCLFDELGAGTDPTEGAALAVAVLTFLHNMQCRTMA 445
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L + ENA EFS+ETLRPTYR+L G G SNA I+K +G II+
Sbjct: 446 TTHYSELKVFALTEPGVENACCEFSVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIE 505
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A++ +E+ + +L +L E R +E + ++ AEI L + + + +
Sbjct: 506 DAKRHIEK-----EDAAFEDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQKEERF 560
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-----DEINSLIKESESA 561
+ L K ++ Q+ L AK D+ +++ N+L + S +E S ++
Sbjct: 561 QDQKERLLEKAREEAQKILQDAKDTADSTIRNI-NKLANQSGAGKELEEQRSKLRNKIKD 619
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ + +P S + + G+ V V S+ K TV +P + VQ G
Sbjct: 620 VDKKLAPKKP----QAPRKTISPKSLKIGDGVKVLSMNLK-GTVSSLPNAKGDLYVQMGI 674
Query: 622 MRVRVKKNNIRPI----------PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+R V NIR + P + N A + + R G+ G + G
Sbjct: 675 LRSLV---NIRDLELLNESSISGPGLESHGGLNGAGK-KAGSPMRTPGAFGKKGGSSQSG 730
Query: 672 PRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
++ S + ++L G+ V+EA +LD L A + V+HG GTG ++ V
Sbjct: 731 IKMSKSFSVSPEINLIGLTVDEAVPELDKYLDDAYLAHLPQVRVVHGRGTGALRAGV--- 787
Query: 727 LRNHPRVAKYEQE 739
H R KY +E
Sbjct: 788 -HQHLRRLKYVKE 799
>gi|431757245|ref|ZP_19545876.1| MutS2 protein [Enterococcus faecium E3083]
gi|430619534|gb|ELB56361.1| MutS2 protein [Enterococcus faecium E3083]
Length = 786
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|375009800|ref|YP_004983433.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288649|gb|AEV20333.1| hypothetical protein GTCCBUS3UF5_30300 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 784
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 215/717 (29%), Positives = 355/717 (49%), Gaps = 86/717 (11%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS+ L +R + + R E L+S+++ +AQ + +IT R R + +
Sbjct: 146 VLDAASDRLRSLRGQIRSVETRIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPV 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ GI + S+SGAT F+EP+ VE NN E E IL L+A++A
Sbjct: 202 KQEYRSAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVA 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ + ++ + +D AFA+A +A+ + P ++++ ++ F + +HPLL
Sbjct: 261 EQAEPLARAVESLAALDFAFAKAKYARRLQAAKPAVNNRGYLRFVQA------RHPLL-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D E + VP DI++ + +VITGPNTG
Sbjct: 313 ------------------DQEKA---------------VPNDIELGGDYTTIVITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 340 GKTVTLKTVGLLTLMAQAGLFIPAADGSEAAVFRAVYADIGDEQSIEQSLSTFSSHMVNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDIL V +SLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 400 VDILRHVDGQSLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYN 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 460 RPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SA 514
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ H + SL +++ E + A + E L E E + ++L+ A A+ TQ
Sbjct: 515 ESHNVENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQ 574
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + A+ + + ++Q+ ++ A+ + E++ +AA A + ++
Sbjct: 575 KAADIIRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKKRLAA---AMPKVEKRKKAK 631
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
S Q G++V V SL K + +V DD VQ G +++++++ ++ I ++
Sbjct: 632 KAASRHVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSAPA 689
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
K P ++ + A S E LDLRG R E+A +L+ L
Sbjct: 690 KE-VTPIATVKGK-------DAHVSLE--------------LDLRGERYEDALLRLEKYL 727
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
A + + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 728 DDAVLAGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 784
>gi|257886737|ref|ZP_05666390.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|257822791|gb|EEV49723.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
Length = 786
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVYAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|295090651|emb|CBK76758.1| MutS2 family protein [Clostridium cf. saccharolyticum K10]
Length = 816
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 198/672 (29%), Positives = 322/672 (47%), Gaps = 79/672 (11%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA HK +P G+ + S++G+T F+EP + NN L E E
Sbjct: 186 VITMRDGRYCLPVKAEHKNQVP-GMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKRE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+L L++++ + + + +D FA+A ++ + P +++ +
Sbjct: 245 IEFVLMALSSQLVPYTETLAENLSILARLDFIFAKASLSRHFNCTEPKFNNRRY------ 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
INI+ +HPLL +P K VPI+I +
Sbjct: 299 INIKDGRHPLL---------------DPKKV--------------------VPINIYLGD 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L FD + ADIGD QS+E
Sbjct: 324 SFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA ++L +L + +
Sbjct: 384 QSLSTFSAHMTNIVSILNEADSNSLCLFDELGAGTDPTEGAALAVAVLTFLHNMQCRTMA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L + ENA EFS+ETLRPTYR+L G G SNA I+K +G II+
Sbjct: 444 TTHYSELKVFALTEPGVENACCEFSVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIE 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A++ +E+ + +L +L E R +E + ++ AEI L + + + +
Sbjct: 504 DAKRHIEK-----EDAAFEDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQKEERF 558
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-----DEINSLIKESESA 561
+ L K ++ Q+ L AK D+ +++ N+L + S +E S ++
Sbjct: 559 QDQKERLLEKAREEAQKILQDAKDTADSTIRNI-NKLANQSGAGKELEEQRSKLRNKIKD 617
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ + +P S + + G+ V V S+ K TV +P + VQ G
Sbjct: 618 VDKKLAPKKP----QAPRKTISPKSLKIGDGVKVLSMNLK-GTVSSLPNAKGDLYVQMGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+R V NIR + + + P + + S ++G + +S++ +
Sbjct: 673 LRSLV---NIRDLELLNESSISGPGLEIHGGLNGAGKKAGSSMRTPGAFGKKGGSSQSGI 729
Query: 682 ------------DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
+L G+ V+EA +LD L A + V+HG GTG ++ V
Sbjct: 730 KMSKSFSVSPEINLIGLTVDEAVPELDKYLDDAYLAHLPQVRVVHGRGTGALRAGV---- 785
Query: 728 RNHPRVAKYEQE 739
H R KY +E
Sbjct: 786 HQHLRRLKYVKE 797
>gi|431762509|ref|ZP_19551071.1| MutS2 protein [Enterococcus faecium E3548]
gi|430625201|gb|ELB61851.1| MutS2 protein [Enterococcus faecium E3548]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|227552101|ref|ZP_03982150.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|424762404|ref|ZP_18189913.1| MutS2 family protein [Enterococcus faecalis TX1337RF]
gi|431033419|ref|ZP_19491265.1| MutS2 protein [Enterococcus faecium E1590]
gi|227178767|gb|EEI59739.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|402424629|gb|EJV56797.1| MutS2 family protein [Enterococcus faecium TX1337RF]
gi|430564520|gb|ELB03704.1| MutS2 protein [Enterococcus faecium E1590]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|336435678|ref|ZP_08615393.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001131|gb|EGN31277.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 791
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 320/665 (48%), Gaps = 91/665 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITLRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ + A+ EI+ + ++D FAR A M PIL+++
Sbjct: 245 EIQVILARLSEDTAEYIEEIRTDYRVLTDLDFIFARGQLALSMSASRPILNNEGR----- 299
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL + VPI + +
Sbjct: 300 -IHIRDGRHPLLDARKV-----------------------------------VPITVTLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFSLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAADRSELAVFHQVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V +SLVL DE+G+GTDP+EG ALA +IL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKDVDEQSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +E+L+PTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTEGVENACCEFDVESLKPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A+ R Q +L L +R +E + + E+ L + + +
Sbjct: 504 EDAKN-----RLTEQDVSFEDLLTDLENSKRIIEKERDEIQTYKREVERLKTQTRQKQEK 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA------SADEINSLIKESE 559
LD + + + T++ L AK D +++F ++ + K +
Sbjct: 559 LDEQRDRILREATEKANAILREAKEMADETMKNFRKFGKEGISAAEMERERERLRKKIKD 618
Query: 560 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
+A + ++ +P + S+ + GE V V S+ + T+ +P V VQ
Sbjct: 619 TAGKSALKPQKPKKTYKPSDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +R +V +++ I ANP AP+ R++GS +++ SK
Sbjct: 671 GILRSQVNISDLEIIEE------ANPYAPK-----NMRRTGSG-----------KIKMSK 708
Query: 679 N-----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+ ++L G V+EA +LD L A + + V+HG GTG +++ + E LR
Sbjct: 709 SLSVRPEINLLGKTVDEAVAELDKYLDDALLSHLNTVRVVHGKGTGALRKGIHEYLRRQK 768
Query: 732 RVAKY 736
V Y
Sbjct: 769 HVKSY 773
>gi|325264641|ref|ZP_08131371.1| MutS2 protein [Clostridium sp. D5]
gi|324030303|gb|EGB91588.1| MutS2 protein [Clostridium sp. D5]
Length = 791
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 316/667 (47%), Gaps = 95/667 (14%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+A+ A EI + ++D FAR A M+ P+L+ +
Sbjct: 245 EIQVILARLSADTALYIEEIHNNYKLLTDLDFIFARGSLALSMNASRPVLNQEGR----- 299
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I I +HPLL +P K VPI + +
Sbjct: 300 -IRIREGRHPLL---------------DPRKV--------------------VPISVTLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFTLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAGDRSELAIFRQVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQEVDENSLVLFDELGAGTDPTEGAALAIAILSYLHKRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLLGIPGKSNAFAISGKLGLPDYII 503
Query: 446 QRA-QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+ A Q L E + ++ L+ + LES RT I RE+E
Sbjct: 504 EDAKQHLTE----------QDASFEDLLTD---LESGKRTIEKEREAIEAYKREVE---- 546
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
L +A + K +Q ++ L A + T++++ +L D + KE S A
Sbjct: 547 ILKNQAKQKQVKIEEQRERILKEANEKAGTILRE-AKELADETMKNFRKFGKEGIS--VA 603
Query: 565 IVEAHRPDDDFSVSETNTS----------SFTP---QFGEQVHVKSLGDKLATVVEVPGD 611
+E R + ET+ + ++ P + GE V V S+ + TV +P
Sbjct: 604 EMEKERERLRQKMKETSAAGSMAVQKQKKAYKPGDFKLGESVKVLSM-NLTGTVSSLPDS 662
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ VQ G +R +V +++ I PA K + G S + S
Sbjct: 663 RGNLTVQMGILRSQVNISDLEII--------EEPASYNTKSMKRTSKGKLKMS-KSLSVS 713
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
P + +L G V+EA +LD L A S + V+HG GTG +++ + E LR
Sbjct: 714 PEI-------NLLGKTVDEAVSELDKYLDDAILSHLSTVRVVHGKGTGALRKGIHEFLRR 766
Query: 730 HPRVAKY 736
V Y
Sbjct: 767 QKHVKSY 773
>gi|404328575|ref|ZP_10969023.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 222/763 (29%), Positives = 360/763 (47%), Gaps = 119/763 (15%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+L L+++ LE +I ID + + +D AS L IR + + DS +K+
Sbjct: 118 PILTGLVEHMTVPGGLEREIRSAIDDQGGV-MDSASTTLRHIRGQ----IRTFDSRVKQK 172
Query: 74 AAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
I + G + + +IT R R + +K ++ GI + S+SGAT F+EP+ V+
Sbjct: 173 LENIVHSSGKMLSEAIITIRNDRQVIPVKQEYRGAF-GGIVHDQSASGATLFIEPQSIVD 231
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY---LMDRVL---EIDLAFARAGFA 185
NN E E IL +L SE+ +Y L+D V ++D FA+A +
Sbjct: 232 LNNQLSEARAKERHEVERILRVL------SEKTAEYADGLLDSVAGLAQLDFIFAKASYG 285
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
M P L+ + I ++ +HPL+ +P
Sbjct: 286 HQMKASRPRLNDRG------VIRLKRARHPLI---------------SP----------- 313
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
D VPID+ + +T ++ITGPNTGGKT S+KT GL +LM+++GL +PA+
Sbjct: 314 ---------DRVVPIDVLFDEQTHALIITGPNTGGKTVSLKTTGLLTLMAQSGLQIPAEE 364
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
+ F + ADIGD QS+EQ+LSTFS H++ IV IL V +SLVL DE+G+GTDP E
Sbjct: 365 GSEVSVFKKVFADIGDEQSIEQSLSTFSSHMTNIVGILGQVDDQSLVLFDELGAGTDPQE 424
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G AL+ +IL + R V TTHY++L + NA+ EF +ETL PTYR+L G
Sbjct: 425 GAALSIAILDTVYGRGATIVCTTHYSELKAYAYERPGVMNASVEFDVETLSPTYRLLLGI 484
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 485
G SNA I+K +G +II A RL+ + ++ ++ SL + R+ E++ A
Sbjct: 485 PGRSNAFEISKKLGLPEEIIDEA-----RLQISHETNQIDKMIASLEQNRKAAETEEENA 539
Query: 486 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------ 539
L + E+ + DL+R + + ++ ++ + A+ + D ++
Sbjct: 540 RKLKHDAQAREAELTKKLNDLERNKEQILIQAKEKAERAVKKARQEADEIIAALHHYKNS 599
Query: 540 ----ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 595
E+QL DA ++ + ES + ++ HR V + + F + G+ V +
Sbjct: 600 GNVKEHQLIDAKT-RLSHALDALESTDSRKIK-HR----IQVPKKMPAGF--KSGDHVRM 651
Query: 596 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 655
S G V ++ +D LVQ G +++ V+ ++++ + K+ P +R E
Sbjct: 652 TSFGQDGYIVDKI--NDHEYLVQAGVLKMNVQDSDLKLVKEEKK---TRPVVNVRTSGE- 705
Query: 656 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVI 711
T + LDLRG R E+A LD A+ R + +I
Sbjct: 706 --------------------TVRPELDLRGDRYEDAMLKVEKYLDEAMLAGYPR--VSII 743
Query: 712 HGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 752
HG GTG +++ V +++ HP V ++ + G TV K
Sbjct: 744 HGKGTGALRKGVTKLIERHPNVKSSRLGNQGEGGSGVTVVDFK 786
>gi|257892933|ref|ZP_05672586.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257829312|gb|EEV55919.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 626
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELMPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|255654753|ref|ZP_05400162.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-23m63]
gi|296449499|ref|ZP_06891276.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296878178|ref|ZP_06902193.1| exopolyphosphatase [Clostridium difficile NAP07]
gi|296261563|gb|EFH08381.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296430931|gb|EFH16763.1| exopolyphosphatase [Clostridium difficile NAP07]
Length = 792
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/731 (29%), Positives = 359/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +KA ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTTDSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L + ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ + ++ ++ E
Sbjct: 547 IERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + P L+K +D + S+
Sbjct: 664 VDKKRKEAVVQIGIMKMTL------------------PFKSLQKTHKDVSTNVTKSTRN- 704
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
+ + KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 705 -IIRSKSGSVKNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|401680135|ref|ZP_10812059.1| MutS2 family protein [Veillonella sp. ACP1]
gi|400219262|gb|EJO50133.1| MutS2 family protein [Veillonella sp. ACP1]
Length = 792
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 208/738 (28%), Positives = 355/738 (48%), Gaps = 89/738 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 69
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 130 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
V+ NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA +
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPADHG 361
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 487 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+ + D+ S I + I+ + H PD + + G+ V+V SL L
Sbjct: 595 SETNKDKRQSAINAARKDISNV---HVPDAPIDDNRKELTIDAVAIGQVVYVTSL-RSLG 650
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
TV+ + G+ TV + V+V ++ R N +++ P+ RK + GSA
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNDLQSTTREESNKIQRDNLKAQPKTRK----KAGGSA 706
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 719
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 720 KERVLEILRNHPRVAKYE 737
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|385265748|ref|ZP_10043835.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
gi|385150244|gb|EIF14181.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
Length = 785
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 365/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI + ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAHNVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEASVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNDQKDKMMEEAEQKAAEKLEAAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|431741156|ref|ZP_19530063.1| MutS2 protein [Enterococcus faecium E2039]
gi|430602267|gb|ELB39845.1| MutS2 protein [Enterococcus faecium E2039]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 349/728 (47%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEKKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+ H V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKKHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|331089007|ref|ZP_08337914.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406459|gb|EGG85972.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 791
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 219/725 (30%), Positives = 339/725 (46%), Gaps = 93/725 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---G 82
LT L +I CI I D S+D +R+M NL+ + + +
Sbjct: 128 LTPLSNEIERCI-----ISEDEISDDASSALKHIRRSMNNLNDRVHTTLSGLVNGSLRTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ LIT R R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L
Sbjct: 183 LQDALITMRGDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQ 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ E A+ EI+ + ++D FAR A M PIL+ +
Sbjct: 242 EQDEIRKILASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
I I +HPLL + VPI +
Sbjct: 300 ----IRIREGRHPLLDQKKV-----------------------------------VPITV 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ E +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD
Sbjct: 321 SLGDEFSLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L ENA EF +E LRPTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKIYALSTPGVENACCEFDVENLRPTYRLLIGIPGKSNAFAISGKLGLPD 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II A+K R Q +L L RR +E + A+ E L R+ +
Sbjct: 501 YIIDDAKK-----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE-- 559
+ L+ + + + ++ L AK D +++F + + SA E+ KE E
Sbjct: 556 QEKLEEQRDRIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERL 612
Query: 560 ------SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
++ +A ++ ++P + S+ + GE V V S+ + T+ +P
Sbjct: 613 RKKIKDTSASASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARG 664
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
V VQ G +R +V +++ I + + AP+ + +R + S ++ S P
Sbjct: 665 NVTVQMGILRSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPE 715
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+ +L G V+EA +LD L A + + V+HG GTG +++ + E LR
Sbjct: 716 I-------NLLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQK 768
Query: 732 RVAKY 736
V Y
Sbjct: 769 HVKSY 773
>gi|418069516|ref|ZP_12706793.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
gi|357536047|gb|EHJ20078.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
Length = 785
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 220/735 (29%), Positives = 361/735 (49%), Gaps = 91/735 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA + +
Sbjct: 129 IPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQAKYLSE 186
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN + +E+
Sbjct: 187 PIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQVAEVH 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE IL L+A IA +K + +DL A+A +A + P +S ++
Sbjct: 246 EEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------QISTNN 299
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
IN+ +HPL+ +P K VP DI++
Sbjct: 300 RINLRQARHPLI---------------DPKKV--------------------VPNDIRLG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIGD QS+
Sbjct: 325 GEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R +++
Sbjct: 385 EQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQRGAVSI 444
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G D II
Sbjct: 445 TTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGLDEDII 504
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYREIEDE 502
+A+ LV+ + Q + + ++R KL Q +T S E D L + +E
Sbjct: 505 TQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVKGVERL 560
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ DR AKE+ Q +N ++ + D +++ + A + N LI E++S +
Sbjct: 561 SQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-EAKSKL 615
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A+ + D + ++ + Q ++V V + G + + +V D VQ
Sbjct: 616 NALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHHWEVQM 669
Query: 620 GKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++V + + + P K A++ K SAG K
Sbjct: 670 GILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG--------------VK 707
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ + R+ +
Sbjct: 708 TSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNRRIKSF 767
Query: 737 EQESPMNYGCTVAYI 751
E +P N G A I
Sbjct: 768 EY-APANAGGNGATI 781
>gi|327475223|gb|AEA77206.1| MutS2 [Exiguobacterium sp. EPVM]
Length = 784
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 226/748 (30%), Positives = 352/748 (47%), Gaps = 126/748 (16%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----L 66
R L E + L E+E+ I ID + + D AS+ L +R + R+ E +
Sbjct: 116 RIPRLDEYAERLTKLIEVEQAIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRI 173
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
D++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP
Sbjct: 174 DNILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEP 226
Query: 127 KGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
+ V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 227 QAIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVSDSVVINLDVLATLDFVFAKVAY 284
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
+ P L+ + + +HP + P
Sbjct: 285 GHELKATEPKLNDAREIKLKQA------RHPFI----------------P---------- 312
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 ---------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAE 363
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP
Sbjct: 364 FGTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQ 423
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 424 EGAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLME 473
G SNA I++ +G ++I +A + ++ L +Q R +L + L+
Sbjct: 484 VPGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINELEAAKQ--RAEQLEKELIV 541
Query: 474 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 533
+R LE + A+ A++ + RE D +A+ + V+Q AK Q +
Sbjct: 542 KRHDLEEE---QAAFEAKMTEFERE-------RDTMYGEAEARAEKAVEQ----AKRQAN 587
Query: 534 TVVQDFENQLRDASADEINSLIKESESAIAAI--VEAHRPD--DDFSVSETNTSSFTPQF 589
V+ D +LR+ ++KE E IAA +E+ +P D + F
Sbjct: 588 EVI-DRLKKLRE------EGIVKEHE-IIAAKKQLESAKPTLRDKKIQKVKQKAQQKRTF 639
Query: 590 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 647
GE+V V + K V ++ +D+ VQ G M+V VK ++++ I SK ++ +
Sbjct: 640 SKGEEVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGS 697
Query: 648 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESR 705
L++Q ++K+ LDLRG+RVEE +LD I A
Sbjct: 698 SLKRQ----------------------SSTKSELDLRGVRVEEGLTRLDKYIDEALVSGY 735
Query: 706 SVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ +IHG+GTG +++ E L+ H V
Sbjct: 736 DNVRIIHGLGTGAMRQATQEYLKGHRHV 763
>gi|253577240|ref|ZP_04854559.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843354|gb|EES71383.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 788
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 221/739 (29%), Positives = 359/739 (48%), Gaps = 96/739 (12%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGID 84
LE+ I CID + +LD AS +L IR E + R E LD++++ + +
Sbjct: 131 LEDAIKRCID-ESAEVLDSASPELATIRRELRSGEVRIREKLDAMIRSASVSKM----LQ 185
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
LIT R R + +KA ++ GI + S SGAT F+EP+ V NN E
Sbjct: 186 DQLITIRGDRFVIPVKAEYRAHF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREE 244
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL LTA + + + Y D + ++D FA+A A+ + G P ++ + +
Sbjct: 245 REIEVILQKLTALVGEQAELLLYDGDVLGQLDFIFAKARLARELKGTLPRMNDRGFIKLK 304
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+HPL+ P +D VPID+++
Sbjct: 305 KG------RHPLI----------------P-------------------ADQVVPIDVEL 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++TGPNTGGKT ++KT+GL SLM+ +GL++PA++ +L FD I ADIGD QS
Sbjct: 324 GNQYTTIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPAEDGSQLCVFDAIYADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA +IL+++
Sbjct: 384 IEQSLSTFSSHMTNIISILRQMTPKSLVLLDELGAGTDPAEGSALAIAILEHIHSLGCRM 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
V TTH+++L + NA+ EF + TL PTYR+L G G SNA IA+ +G +I
Sbjct: 444 VATTHFSELKAYAYERKGVINASMEFDVATLSPTYRLLVGIPGRSNAFAIAERLGLPERI 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
++ A+ V + R + SL + R E + TA L E+ +L R E +
Sbjct: 504 LEYARGEV-----TEEDMRVENMIASLEQNRLGAEQERETAEQLRREMEELRRRHAAELE 558
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIA 563
L+++ K ++ + A+ + + ++ D + + +A + + LI +
Sbjct: 559 KLEQQRDKRLEKAEEEAAAIIAKARQEAERIISDLRRLAMEEGAAVKEHKLIAARKQLDE 618
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
A + + + P G++V V SL K VVE+ G+ + + VQ G M+
Sbjct: 619 AEPQRRKKSAAARKAAKPPRQIEP--GDEVMVYSLNQK-GHVVELSGNKEAI-VQLGIMK 674
Query: 624 VRVKKNNIRPI---PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V +++ I P S K AP +++ R + +
Sbjct: 675 MKVSLDDMELIAAPPAS--KPVQRTAPNVKRT--------------------RDENVRTE 712
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG +EEA ++D I A + +++IHG GTG+++ + E LR H + +
Sbjct: 713 LDLRGANLEEALIEVDRFIDEAYLSNLGQIYIIHGKGTGILRSGISEYLRKHKHIKSFRL 772
Query: 739 ESPMNY-----GCTVAYIK 752
NY G TVA +K
Sbjct: 773 G---NYGEGGTGVTVAELK 788
>gi|341820105|emb|CCC56337.1| mutS2 protein [Weissella thailandensis fsh4-2]
Length = 795
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 193/669 (28%), Positives = 322/669 (48%), Gaps = 73/669 (10%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + +KA+++ G+ + S +G T ++EP V+ NN E
Sbjct: 188 PIVTIRNERYVLPVKATYRQKF-GGVVHDQSQTGQTLYIEPADVVDMNNRLREYYLKERQ 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE +L L+A++A I+ + +D A+A +A + + P S+++HV
Sbjct: 247 EEERVLIELSAKLAPEADNIENNAQVLGHLDFLNAKARYAVAIKAIEPEFSAENHVRLLK 306
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPLL +P D VP DI +
Sbjct: 307 A------RHPLL---------------DP--------------------DKVVPNDITIG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ +++TGPNTGGKT ++KTLGL +M+++G ++PA + + F I ADIGD QS+
Sbjct: 326 EDYSAIIVTGPNTGGKTITLKTLGLLQIMAQSGFFIPAAEYSSVGIFKEIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H+ I DIL + ++SLVL DE+G+GTDP EG ALA +IL + + +V
Sbjct: 386 EQSLSTFSAHMVNITDILAGMDKDSLVLFDELGAGTDPQEGAALAMAILDAVGETGAYSV 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L NA+ EF +++LRPTY+ L G G SNAL IAK +G II
Sbjct: 446 ATTHYPELKVYGYNRADTINASMEFDIDSLRPTYKFLMGIPGRSNALEIAKRLGLSDTII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A L +++ L+ R + +Q E L + E + +
Sbjct: 506 NSASALT-----SEDSQELNDMIADLVARRNAVLTQQVELTQKVVENRQLKNDYEAKLEA 560
Query: 506 LDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+D++ +AK + ++E N A+ + D ++ D RD + + N L+ +++ A
Sbjct: 561 IDKQ----RAKTVEDAKKEANHIVADARRKTDKIIGDLHKMARDGATIKENKLM-DAKGA 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ A+ E P ++ + + + P G+ V V+ G + V ++ D+ VQ G
Sbjct: 616 LNAMHEEPSPTNNRILRKAKKAKQVPLSVGDTVLVREYGQQGTIVRQL--KDNKFEVQMG 673
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+++ + I + P PR K+++ + ++N +
Sbjct: 674 ILKMVLAGEEIE---KQDKAPTNEPKPRQNKRRKTSHVNTNKATNRAEAAA--------K 722
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG+R E A +LD I A + S + +IHG GTG +++ V E LR+H ++ ++
Sbjct: 723 LDLRGIRYEPAMAELDRFIDQALLNNLSSVEIIHGKGTGAIRKGVQEYLRSHRQIESFKF 782
Query: 739 ESPMNYGCT 747
P + G T
Sbjct: 783 TGP-DQGAT 790
>gi|303228407|ref|ZP_07315240.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-134-V-Col7a]
gi|302516909|gb|EFL58818.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 792
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 209/738 (28%), Positives = 355/738 (48%), Gaps = 89/738 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 69
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 130 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
V+ NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA +
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPADHG 361
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 487 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+ + D+ S I + I+ + H P+ + S G+ V+V SL L
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
TV+ + G+ TV + V+V ++ R N +++ P+ RK R GSA
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKTRK----RAGGSA 706
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 719
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 720 KERVLEILRNHPRVAKYE 737
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|219848614|ref|YP_002463047.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
gi|219542873|gb|ACL24611.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
Length = 820
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 219/729 (30%), Positives = 340/729 (46%), Gaps = 108/729 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS L +R E + L L+ + A + +P+IT R R + +KA H
Sbjct: 145 VLDSASPTLARLRHEVRVAFNRLQERLQSMIHSPTLAAALQEPIITVRNGRYVIPVKAIH 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + G+ + S SGAT ++EP VE NN L ++E E IL L+ ++ ++
Sbjct: 205 RREV-RGLVHDQSGSGATLYIEPLAIVELNNRWRELQSAEAEEVQRILGALSEQVGEAVS 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGS 220
I ++ + +DL FA A +A P + S + + + +HPLL
Sbjct: 264 AIVSTVNMLAALDLVFALARYAIATRSTAPEIVDWRPDDPPSTEPPLRLIRARHPLL--- 320
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
D VPID+ + +++ITGPNTGG
Sbjct: 321 --------------------------------PPDKVVPIDLWLGGTFSILLITGPNTGG 348
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT ++KT GL +LM++AG+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 349 KTVALKTTGLLALMAQAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANII 408
Query: 341 DILELVSR-------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
+L+ ++ +LVL DE+G+GTDP EG ALA +I+ L +
Sbjct: 409 RVLQTLTEAQSFPAAPTDQALFDYRRPAALVLFDELGAGTDPVEGSALARAIIGRLLELG 468
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
LAV TTHY +L ENA+ EF +ETL PTYR+ G G SNAL IA +G D
Sbjct: 469 VLAVATTHYPELKAFAYATPGVENASVEFDVETLAPTYRLSIGVPGHSNALAIAARLGLD 528
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I++A+ + +R + + +L + ER A T A AE E+
Sbjct: 529 PALIEQARSFI-----DRNEAQVEDLLAGIQRER-----AAATEALQRAE------ELRA 572
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL------I 555
+A+ R A + + + L A+ +I+ +++ QLR +E S+ +
Sbjct: 573 DAEKYRARLAAEQQAFAAEREVALAAARQEIEAELREVRQQLRRLR-EEYRSVSISRQWL 631
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLATVVEVP 609
+E+E +AA E + + + S+ P Q G+ VHV S+G ++ +
Sbjct: 632 EEAEKRLAATAEQAQQATERLQRQMVPSAPPPPAERPLQVGDTVHVASVGLN-GEIMAID 690
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
DD+T VQ G R+ VK + + KR AA+ R + E
Sbjct: 691 TDDETATVQVGGFRLTVKCSEL------KRAKAADNGER------------RFAPPERPV 732
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
P + + D+RG RV E S +LD L A + +IHG GTG +++ V ++L
Sbjct: 733 NLPSMPDVSMTFDMRGWRVSEVSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRDVL 792
Query: 728 RNHPRVAKY 736
+HP VA +
Sbjct: 793 ASHPLVASF 801
>gi|423090112|ref|ZP_17078447.1| MutS2 family protein [Clostridium difficile 70-100-2010]
gi|357557023|gb|EHJ38589.1| MutS2 family protein [Clostridium difficile 70-100-2010]
Length = 792
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 361/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +K+ ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L + ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ + ++ ++ E
Sbjct: 547 IEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + +++ RK+ + + + +SGS
Sbjct: 664 VDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVTKSTRNIIRSKSGSV------ 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 714 ----------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|304385233|ref|ZP_07367578.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
gi|304328440|gb|EFL95661.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
Length = 786
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 220/735 (29%), Positives = 361/735 (49%), Gaps = 91/735 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA + +
Sbjct: 130 IPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQAKYLSE 187
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN + +E+
Sbjct: 188 PIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQVAEVH 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE IL L+A IA +K + +DL A+A +A + P +S ++
Sbjct: 247 EEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------QISTNN 300
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
IN+ +HPL+ +P K VP DI++
Sbjct: 301 RINLRQARHPLI---------------DPKKV--------------------VPNDIRLG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIGD QS+
Sbjct: 326 GEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R +++
Sbjct: 386 EQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQRGAVSI 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G D II
Sbjct: 446 TTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGLDEDII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYREIEDE 502
+A+ LV+ + Q + + ++R KL Q +T S E D L + +E
Sbjct: 506 TQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVKGVERL 561
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ DR AKE+ Q +N ++ + D +++ + A + N LI E++S +
Sbjct: 562 SQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-EAKSKL 616
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A+ + D + ++ + Q ++V V + G + + +V D VQ
Sbjct: 617 NALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHHWEVQM 670
Query: 620 GKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++V + + + P K A++ K SAG K
Sbjct: 671 GILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG--------------VK 708
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ + R+ +
Sbjct: 709 TSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNRRIKSF 768
Query: 737 EQESPMNYGCTVAYI 751
E +P N G A I
Sbjct: 769 EY-APANAGGNGATI 782
>gi|254974324|ref|ZP_05270796.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-66c26]
gi|255091720|ref|ZP_05321198.1| putative DNA mismatch repair protein [Clostridium difficile CIP
107932]
gi|255313448|ref|ZP_05355031.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-76w55]
gi|255516136|ref|ZP_05383812.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-97b34]
gi|255649232|ref|ZP_05396134.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-37x79]
gi|260682406|ref|YP_003213691.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260686005|ref|YP_003217138.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384359986|ref|YP_006197838.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260208569|emb|CBA61251.1| putative DNA mismatch repair protein [Clostridium difficile CD196]
gi|260212021|emb|CBE02571.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
Length = 792
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 360/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +K+ ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS ++A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSEISAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ N ++ ++ E
Sbjct: 547 IEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRNLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + +++ RK+ + + + +SGS
Sbjct: 664 VDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVTKSTRNIIRSKSGSV------ 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 714 ----------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|326803291|ref|YP_004321109.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651631|gb|AEA01814.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
Length = 795
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 230/742 (30%), Positives = 354/742 (47%), Gaps = 131/742 (17%)
Query: 44 ILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS L IR AE +LD+++K QA + ++T R R + +
Sbjct: 146 VYDEASSHLHSIRQSIKAEEAHIRMSLDNIIKSS-----QADYLSDQIVTIRNDRYVLPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T ++EP+ +E NN L E AE I + L+A++A
Sbjct: 201 KQEYRRKFG-GVVHDQSASGQTLYIEPQVVMESNNKVHSLRIEEQAEIERIFAELSADLA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+EI + ++D A+ +A+ P+++ Q H S+N+E HPLL
Sbjct: 260 PHSQEINQNNQILGQLDFIQAKWRYAKKQGAHRPLIA-QDH----QSLNLEEAVHPLL-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
NP K+ V N+ I + + R+++ITGPNTG
Sbjct: 313 -------------NP-KTAVANT-------------------ISFDGDYRMLIITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT GL LM ++GLY+ AK R+ FD I ADIGD QS+E NLSTFSGH++ I
Sbjct: 340 GKTITLKTTGLLQLMGQSGLYITAKADSRIGVFDHIFADIGDEQSIEANLSTFSGHMTNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKD 398
+ ILE + +SLVLIDE+GSGTDP EG ALA +IL L +VG V+ TTHY +L
Sbjct: 400 ISILEAIDDQSLVLIDELGSGTDPKEGAALAMAILNRLA-QVGCTVLATTHYPELKAYAF 458
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ--------- 449
++ NA+ EF +TL PTYR+L G G SNA +I++ +G D+ I+ A+
Sbjct: 459 EEPNAINASVEFDEKTLTPTYRLLIGQPGRSNAFDISQRLGLDQSIVDEARYYVGEESQS 518
Query: 450 --KLVERLRPERQQHRKSE--LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
++++ L +RQ + + L Q L E + L + +L + + + EA D
Sbjct: 519 LNEMIDDLDEKRQAYERDNQALSQDLQEADKLLADLKKAYHALENDKITYLNRAKREAND 578
Query: 506 L-------------DRRAAHLKAKETQQVQQ-ELNFAKVQIDTVVQDFENQLRDASADEI 551
L D R + Q V++ E+ + QI + Q+ E QLR
Sbjct: 579 LVAKTQEKADKLLGDIREWQKNNPQGQTVKEHEMIDKQKQIANLTQE-EQQLRK------ 631
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
N ++K + + + D V G++V V ++ T+VE +
Sbjct: 632 NKVLKR---------QKRKKNKDLEV------------GDEVKVIPYS-QMGTLVE-KRE 668
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
D LVQ G +++ + + ++ + QE Q S G +
Sbjct: 669 DKHWLVQMGMLKMEIPEKDL-------------------ELQEKSQPKSKGKKGSSSVRA 709
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+ + K+ LDLRGMR EEA LD I A + + +IHG GTGV+++ V + LRN
Sbjct: 710 SQSKNIKSELDLRGMRYEEAMTALDRYIDQALLANYPQVTIIHGFGTGVIRDGVQKYLRN 769
Query: 730 HPRVAKYEQESPMNYGCTVAYI 751
+ RV + +P N G A I
Sbjct: 770 NKRVKSFSY-APHNLGGQGATI 790
>gi|377556922|ref|ZP_09786596.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
gi|376166998|gb|EHS85865.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
Length = 789
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 337/715 (47%), Gaps = 147/715 (20%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
QA + P+IT R R + + A ++ G+ + S+SG T ++EP VE NN +
Sbjct: 180 QAKKLSDPIITIRNDRYVIPVLAQYRNQF-GGVVHDQSASGQTLYIEPGSVVELNNRLRQ 238
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
E+ E +L L+ I + EI + +DL A+A A M PI++ Q
Sbjct: 239 AQIEEVQEMRRVLIELSDLIRPYQDEIAQNEAILGHLDLINAKAKLAAQMKASLPIVNDQ 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+N+ +HPL+ P V N
Sbjct: 299 L------VVNLRQARHPLI----------------PQDQVVAN----------------- 319
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI++ + + +VITGPNTGGKT ++KTLG+ LM+++G+++PA + ++ FD + AD
Sbjct: 320 --DIQLGKDYQALVITGPNTGGKTITLKTLGIIQLMAQSGMFIPANENSQVTVFDNVFAD 377
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QSLEQNLSTFSGH+ + ILE ++ SL+L+DE+G+GTDP EG ALA +IL +
Sbjct: 378 IGDEQSLEQNLSTFSGHMENVKTILEQMTDHSLILLDELGAGTDPKEGAALAMAILDAIG 437
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+VTTHY +L NA+ EF TL+PTYR+L G G SN + IA +
Sbjct: 438 TCGARVMVTTHYPELKVYAYDRQATINASMEFDQATLQPTYRLLIGIPGQSNGIAIANRL 497
Query: 439 GFDRKIIQRAQKLVER-----------LRPERQQHR----------------KSELYQSL 471
G D IIQ AQ LV+ L +R+Q R ++EL Q L
Sbjct: 498 GLDPGIIQTAQSLVQADSQDLNQMIGDLVEQRKQAREENARLVELREANEAKEAELTQKL 557
Query: 472 M---EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ----VQQE 524
E+R +L +AR+ A+ E+ K D+ HL+ + QQ + E
Sbjct: 558 TRFDEQRDRLYDEARSKAN---------HEVAQAKKQADKIIHHLRQLQVQQGANVKEHE 608
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
L AK Q++ + QD R A NS+++ +++ +A +P
Sbjct: 609 LINAKGQLNALHQDNP---RLAH----NSVLRRAKAK-----QALKP------------- 643
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 644
G+ V VKS G + T+V G VQ G +++ + + ++ + + K
Sbjct: 644 -----GDTVQVKSYGQQ-GTLVAKRGRHQWE-VQLGILKMAIDEADLTKVAAGQIK---T 693
Query: 645 PAPRLRKQQ----EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 698
AP+ RK+ + RQ+ + LDLRG R E+A +LD I
Sbjct: 694 DAPKARKRPVRTIQTRQTAA-------------------RLDLRGKRYEQAMSELDAFID 734
Query: 699 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 751
A + + + ++HG GTG +++ E LR++PRV +E +P N G T+A+
Sbjct: 735 HALLNNLTSVTIVHGKGTGALRKGTQEYLRSNPRVKSFEFATPNNGGDGATIAFF 789
>gi|239628827|ref|ZP_04671858.1| MutS2 family protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518973|gb|EEQ58839.1| MutS2 family protein [Clostridiales bacterium 1_7_47FAA]
Length = 843
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 235/756 (31%), Positives = 354/756 (46%), Gaps = 82/756 (10%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDS 68
Y L L LT L +I CI + I D AS L +R K R L+S
Sbjct: 154 YDSLEPLFAGLEPLTPLNNEIKRCILSEDEIA-DDASPGLSHVRRSMKVAADRIHTQLNS 212
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+L + + A +IT R R C+ +K+ +K + G+ + SS+G+T F+EP
Sbjct: 213 ILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQSSTGSTLFIEPMA 265
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
V+ NN L E E A+L+ L+ + A E++ + + ++D FA+AG A+
Sbjct: 266 IVKLNNEIRELEIQEQKEIEAVLASLSNQAAPYCGELRMNQELLAQLDFIFAKAGLARHY 325
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
P+ + + + I+I+ +HPLL NP +
Sbjct: 326 KCSAPVFNDRGY------IHIKDGRHPLL---------------NPQTA----------- 353
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPI+I + + ++++TGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 354 ---------VPINIWLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAWEGSE 404
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
L FD + ADIGD QS+EQ+LSTFS H++ V IL + SL L DE+G+GTDP+EG A
Sbjct: 405 LAVFDEVFADIGDEQSIEQSLSTFSAHMTNTVRILNEANPRSLCLFDELGAGTDPTEGAA 464
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA +IL +L + + TTHY++L ENA EFS+ETL+PTYR+L G G
Sbjct: 465 LAIAILTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETLQPTYRLLIGVPGK 524
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I+ +G II A R E + +L SL R +E + +
Sbjct: 525 SNAFAISSKLGLPDYIIDEA-----RNHLEAKDVSFEDLLTSLESSRLTIEKEQAEINAY 579
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
EI L + + + LD R + T++ Q+ L AK D ++ N+L +
Sbjct: 580 KDEIAKLKSRLTQKEERLDERKDKVIRSATEEAQRILREAKETADQTIKQI-NKLTAGAG 638
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLAT 604
IN ++E S + + + DD +V S +P + G+ V V S+ K T
Sbjct: 639 --INKELEEQRSRLRD--QLKKTDDKLAVKAKGPSQPISPKKLKIGDGVKVLSMNLK-GT 693
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKNA--ANPAPRLRKQQEDRQSGS 660
V +P + VQ G +R V NIR + N K NA + + + +
Sbjct: 694 VSTLPNSKGDLYVQMGILRSLV---NIRDLELLNEKDINATLGDGSSISYGGKSPAKGKG 750
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+GSS + S + T N L GM V+EA ++ L A + V+HG GTG
Sbjct: 751 SGSSQIKVSKSATISTEVN---LIGMTVDEALPVMEKYLDDAYLAHLPSVRVVHGRGTGA 807
Query: 719 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+K V + LR V ++ Q + G TV K
Sbjct: 808 LKNAVHKRLRQLKYVKEFRLGQFGEGDSGVTVVTFK 843
>gi|331092295|ref|ZP_08341123.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401727|gb|EGG81306.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 791
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 212/698 (30%), Positives = 327/698 (46%), Gaps = 74/698 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR + E + S L + + ++ + LIT R R C+ +KA +
Sbjct: 145 ISDDASSTLKHIRRSIQLLNERVHSTLTSLVSGSLKSY-LQDSLITMRGDRYCIPVKAEY 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ +P G+ + SS+G+T F+EP V+ NN L E E ILS L+ E +
Sbjct: 204 RSQVP-GMIHDQSSTGSTLFIEPMAIVKLNNDLKELYGKEQEEIQVILSRLSEEAGGYIQ 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
E++ + E+D FA+ A M+ PI +++ + I+I +HPLL +
Sbjct: 263 ELRTNFAILTELDFIFAKGMLALSMNAGKPIFNTKGY------IHIREGRHPLLDKKKV- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI + + + ++++TGPNTGGKT
Sbjct: 316 ----------------------------------VPITLTLGGDFDLLIVTGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
S+KT+GL +LM +AGL++PA + L F + ADIGD QS+EQ+LSTFS H++ IV L
Sbjct: 342 SLKTVGLFTLMGQAGLHIPALDRSELAVFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFL 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V SLVL DE+G+GTDP+EG ALAT+IL +L R + TTHY++L
Sbjct: 402 KDVDEHSLVLFDELGAGTDPTEGAALATAILSHLHQRGIRTMATTHYSELKIFALSTEGV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA EF +ETLRPTYR+L G G SNA I+ +G II A++ + +H
Sbjct: 462 ENACCEFDVETLRPTYRLLLGIPGKSNAFAISGKLGLPDYIIDEAKR-------QLSEHD 514
Query: 464 KS--ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
+S +L L E R+ +E + AS EI L +E + LD + + + ++
Sbjct: 515 ESFEDLLSDLEESRKTIEKERAEIASYKQEIQQLKSRVEKKQVRLDEQKERILREANEKA 574
Query: 522 QQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
L AK D +++F + + S E+ + I+ E +
Sbjct: 575 NAILRDAKEVADETMKNFRKFGKENISVAEMERERERLRQKISKTQEKSSIQPKKPKKQH 634
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
F + GE V V S+ + TV +P + VQ G +R +V +++ I
Sbjct: 635 KPGDF--KLGESVKVLSM-NLTGTVSSLPDAKGNLFVQMGILRSQVNISDLEIIE----- 686
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 699
P KQ SG S + S P + +L G V+EA +LD L
Sbjct: 687 ---EPMTITAKQMRRTSSGKMKMS-KSLSVSPEI-------NLLGKTVDEAIAELDKYLD 735
Query: 700 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + + ++HG GTG +++ + L+ V Y
Sbjct: 736 DAYLAHLTPVRIVHGKGTGALRQGIHNYLKRLKYVKSY 773
>gi|270290964|ref|ZP_06197187.1| MutS2 protein [Pediococcus acidilactici 7_4]
gi|270280360|gb|EFA26195.1| MutS2 protein [Pediococcus acidilactici 7_4]
Length = 785
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 220/735 (29%), Positives = 361/735 (49%), Gaps = 91/735 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 85
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA + +
Sbjct: 129 IPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQAKYLSE 186
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN + +E+
Sbjct: 187 PIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQVAEVH 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE IL L+A IA +K + +DL A+A +A + P +S ++
Sbjct: 246 EEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------QISTNN 299
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
IN+ +HPL+ +P K VP DI++
Sbjct: 300 RINLRQARHPLI---------------DPKKV--------------------VPNDIRLG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIGD QS+
Sbjct: 325 GEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R +++
Sbjct: 385 EQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQRGAVSI 444
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G D II
Sbjct: 445 TTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGLDEDII 504
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYREIEDE 502
+A+ LV+ + Q + + ++R KL Q +T S E D L + +E
Sbjct: 505 TQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVKGVERL 560
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
++ DR AKE+ Q +N ++ + D +++ + A + N LI E++S +
Sbjct: 561 SQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-EAKSKL 615
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A+ + D + ++ + Q ++V V + G + + +V D VQ
Sbjct: 616 NALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHHWEVQM 669
Query: 620 GKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++V + + + P K A++ K SAG K
Sbjct: 670 GILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG--------------VK 707
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ + R+ +
Sbjct: 708 TSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNRRIKSF 767
Query: 737 EQESPMNYGCTVAYI 751
E +P N G A I
Sbjct: 768 EY-APANAGGNGATI 781
>gi|210613370|ref|ZP_03289690.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
gi|210151212|gb|EEA82220.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
Length = 791
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 205/666 (30%), Positives = 315/666 (47%), Gaps = 93/666 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCLPVKAEYRSQVS-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ + A+ E++ + E+D FA+ A M+ PI ++ D
Sbjct: 245 EIQIILARLSVDAAEYIEELRSNYTILGELDFIFAKGALALSMNASRPIFNT------DG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL + VPI I +
Sbjct: 299 YIHIREGRHPLLDKKKV-----------------------------------VPITIMLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+
Sbjct: 324 KEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSKLSVFENVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQDVDDRSLVLFDELGAGTDPTEGAALAIAILSYLHERGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTKGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A+ + + E ++ L+ + LE+ RT AEI REIE
Sbjct: 504 ESAKSHLS---------EQDESFEDLLAD---LETSRRTIEKEQAEIASYKREIEKLKHS 551
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
LD + L T+Q ++ + A + + ++++ ++ D + + KE+ SA
Sbjct: 552 LDAKQEKL----TEQKERIIKEANEKANAILRE-AKEVADETMKQFRKFGKENISAADME 606
Query: 566 VEAHRPDDDFSVSETN-------------TSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
E R + +++ S F + GE V V S+ + TV +P
Sbjct: 607 RERERLRKKMAKTQSGMTLEKKKPKKQHKPSDF--RLGESVKVLSM-NLTGTVSSLPDAK 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+ VQ G +R +V +++ I P KQ +G S A P
Sbjct: 664 GNLFVQMGILRSQVNISDLEIIE--------EPMTITAKQMRRTSTGKMKMSKSLA-VSP 714
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
+ +L G V+EA +LD L A S + ++HG GTG ++ + L+
Sbjct: 715 EI-------NLLGKTVDEAIAELDKYLDDAYIAHVSPVRIVHGKGTGALRNGIHSYLKRQ 767
Query: 731 PRVAKY 736
V Y
Sbjct: 768 KHVKSY 773
>gi|433449627|ref|ZP_20412491.1| MutS2 family protein [Weissella ceti NC36]
gi|429539141|gb|ELA07179.1| MutS2 family protein [Weissella ceti NC36]
Length = 794
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 326/669 (48%), Gaps = 70/669 (10%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T+R R V +KA ++ G+ + S +G T ++EP V+ NN E
Sbjct: 188 PIVTQRNDRYVVPVKAEYRSKF-GGVVHDQSQTGQTLYVEPADVVDMNNRLRENIVKERH 246
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE IL+ L+ + +++ D + ++D A+A +A + P +S ++H+
Sbjct: 247 EEARILAELSELLLPVAQDVTANADILGQLDFVNAKARYAMMSKSLEPEVSDENHIRLLE 306
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPLL L+K +++ DI +
Sbjct: 307 A------RHPLL------------------------------DLNKAVAN-----DIVLG 325
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++ITGPNTGGKT ++KTLGL LM+++GL++P H + FD I ADIGD QS+
Sbjct: 326 EDYTAIIITGPNTGGKTITLKTLGLLQLMAQSGLFIPTAEHATVGMFDQIFADIGDEQSI 385
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H+ IV IL+ ++ SLVL DE+G+GTDP EG ALA SIL + V
Sbjct: 386 EQSLSTFSSHMVNIVSILDNLTPNSLVLFDELGAGTDPQEGAALAMSILDAVGQTGAYTV 445
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L NA+ EF +ETL+PTY+ L G G SNAL I++ +G D II
Sbjct: 446 ATTHYPELKVYGFNRADTINASMEFDVETLKPTYKFLLGIPGRSNALEISRRLGLDNTII 505
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A L + + +++ L+ R + +Q + AE + E D+ +
Sbjct: 506 DGAASLA-----DDESQELNDMIADLVARRNAVLTQQIELSDQIAENRRMKNEYTDKLEK 560
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
+D A K Q+ + +K + D ++ D RD + + N LI +++ A+ A+
Sbjct: 561 VDTVRAQTIEKAKQEANHIVAESKKKADRIISDLHKMQRDGAQIKENKLI-DAKGALNAL 619
Query: 566 VEAHRPDDDFSV---SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
+ +++ + + T G+ V V G + TV+ V +D +Q G +
Sbjct: 620 EQKPSAENNRVLKRAKQAKDQGITK--GDTVLVMEYGQQ-GTVLRVL-KNDQFEIQMGIL 675
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
++ + + I+ +K AA A + +K+ + + + + +EAS +LD
Sbjct: 676 KMVLSGDEIQKQAETK---AAPSAQKAKKRTAVKATTNKAVNRQEASV---------TLD 723
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES 740
LRG R + A +LD I A + S + +IHG GTG +++ V E LR+H V +
Sbjct: 724 LRGQRYDAAMQKLDQFIDRALLNNLSSVEIIHGKGTGAIRQGVTEYLRSHRGVKSFNFTG 783
Query: 741 PMNYGCTVA 749
P + G T A
Sbjct: 784 P-DQGATYA 791
>gi|259047143|ref|ZP_05737544.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
gi|259036193|gb|EEW37448.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
Length = 785
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 223/722 (30%), Positives = 348/722 (48%), Gaps = 100/722 (13%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS +L IR ++ + +D L AQ + +IT R R + +
Sbjct: 146 VLDSASPNLHGIRVGIQKTEQEIRRQMDQYLTGKNAQY-----LSDTIITIRNDRYVLPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI- 158
KA +K + G + S +G T FMEP+ V NN E E IL L+ ++
Sbjct: 201 KAEYKSVF-GGTVHDQSGTGQTLFMEPQAVVNLNNKLREYQVQEKREVERILWELSQKLM 259
Query: 159 --AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
S + Y++ R +D+ A+A +A ++ PI+ Q+HV+ + HPL
Sbjct: 260 PYTNSLHQNHYVLAR---LDVVNAKALYANEINATEPIIDRQNHVALWKAW------HPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
L D E K +S+ DI + E + +VITGP
Sbjct: 311 L--------------------DRE----------KAVSN-----DIILGEEYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT +KT+G+ LM++ GLY+PA + R+ F I ADIGD QS+EQNLSTFS H+
Sbjct: 336 NTGGKTILLKTVGVIQLMAQMGLYIPAGENSRVGIFTEIFADIGDEQSIEQNLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
S IV IL+ ++ +SL+LIDEIGSGTDP EG +LA +IL Y+ + + +THY +L
Sbjct: 396 SNIVSILKQINDKSLLLIDEIGSGTDPQEGSSLAIAILDYIASKQSYVIASTHYPELKAY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
+ NA+ EF +TL+PTY++L G G SNA +I+K +G II +A+ L+
Sbjct: 456 GYDRPKTINASMEFDGDTLQPTYQLLLGIPGRSNAFDISKRLGLPSIIIDQARGLL---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQA---RTAASLHAEIM-DLYREIEDEAKDLDRRAAH 512
E Q + + L ++RR+ + A R L +++ DL +E E + R
Sbjct: 512 SEEDQDLNA-MISDLEQKRRRAQRDADKMRHQLELSTQLLEDLQKETEQFKANKARLLEE 570
Query: 513 LKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAIVEAHRP 571
K + ++Q +K D ++ + E QLR + E ++A+ +
Sbjct: 571 AKERANSLIEQ----SKDDADKILSEIRELQLRSKQTTVKEHEMIEKKTALTDLKHEQAL 626
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+ + + Q G+ V V S G + T+VE D++ V VQ G +++++ ++
Sbjct: 627 KKNKVLRKVKAKK-ALQVGQSVEVLSFGQR-GTLVEKVSDEEWV-VQMGIIKMKIAIEDL 683
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
PI + QE +Q S+ R + LDLRG R EEA
Sbjct: 684 APIAET---------------QEAKQQVIVKSA--------RSSHVSSELDLRGKRYEEA 720
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVA 749
L++ L A + + +IHG GTG +++ V ++LR+H VA +E +PMN G A
Sbjct: 721 MKDLELYLDAAILANYPRVTIIHGRGTGAIQQGVHKVLRSHRSVASFEF-APMNTGGNGA 779
Query: 750 YI 751
I
Sbjct: 780 TI 781
>gi|335356987|ref|ZP_08548857.1| DNA mismatch repair protein [Lactobacillus animalis KCTC 3501]
Length = 786
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 215/700 (30%), Positives = 344/700 (49%), Gaps = 137/700 (19%)
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
+T R R + ++A HK GI + SSSG TYF+EP+ VE NN RL ++AE+
Sbjct: 189 VTIRNDRYVIPVRAEHKGKF-GGIVHDQSSSGQTYFIEPREIVELNN---RLKQEQVAEK 244
Query: 148 TAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
IL +L + E E+ + + E D A+A +A+ + P+LS Q
Sbjct: 245 EEILRILRELSEETMPYTAELAHDAKILGEFDFINAKAKYAKELKATQPLLSEQK----- 299
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I + + HPLL EM D V DI +
Sbjct: 300 -DIYLRQVWHPLL-------------------------EM----------DKAVKNDIIL 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ + +VITGPNTGGKT ++KTLGL +M ++GL++PA + R+ F I ADIGD QS
Sbjct: 324 GKDYQAMVITGPNTGGKTITLKTLGLVQMMGQSGLFIPAFENSRIGVFKDIFADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H++ IV+ILE V ++SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 384 IEQSLSTFSSHMTNIVNILEHVDQDSLVLFDELGAGTDPQEGAALAIAILDAIGASGAYV 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTHY +L + T+ NA+ EF+ ETLRPTYR+L G G SNA NI++ +G + I
Sbjct: 444 LATTHYPELKTYGFERTQTINASMEFNEETLRPTYRLLIGIPGQSNAFNISERLGLSQTI 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART-------AASLHAEIMDLYR 497
+ A+ LV + + + L+ +RR+ E +A + A LH ++ Y
Sbjct: 504 VAAARNLV-----AKDSQDLNNMIADLVAKRRQAEEEAISLQANLDEAQKLHHDLATAYE 558
Query: 498 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRD 545
+E + + +A K K + V+Q AK + D ++ + EN+L D
Sbjct: 559 RFVNEREQMQDQA---KQKANEIVEQ----AKQKADEIIGELRALKQNAATEIKENELID 611
Query: 546 ASADEINSLIKESESAI--------AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVK 596
A A ++N+L E + A+ A +A +P+DD V+ +G++ V V+
Sbjct: 612 AKA-QLNAL--EQKRALKKNKVLKRAKRKQAFKPNDDVMVTS---------YGQRGVLVQ 659
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
+G+ + VQ G +++++ + ++ + N P+ + +
Sbjct: 660 KVGEHVWE------------VQLGILKIKIDEADLEKV---------NVEPK-----KVK 693
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 714
++G+ S + P+ LDLRG R EEA ++D I A + ++HG
Sbjct: 694 RAGTVLRSASTSHVSPQ-------LDLRGKRYEEAMTEVDRYIDAAILAGYPSVTIVHGK 746
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
GTG +++ + + L+++ V + +P N G TV Y +
Sbjct: 747 GTGALRQGITQYLQSNRAVKSFNFAAPNNGGNGATVVYFR 786
>gi|152976937|ref|YP_001376454.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cytotoxicus NVH 391-98]
gi|189030426|sp|A7GTK1.1|MUTS2_BACCN RecName: Full=MutS2 protein
gi|152025689|gb|ABS23459.1| MutS2 family protein [Bacillus cytotoxicus NVH 391-98]
Length = 786
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 219/752 (29%), Positives = 351/752 (46%), Gaps = 96/752 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI + LD AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITGCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ + +D FA+A +A+ M
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAAEADIVLANVEVIANLDFIFAKALYAKRMK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMELRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----KVIVPNDIVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVHNRGARVVATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + ++ + L E ++ E + A L
Sbjct: 490 NAFEISKRLGLSERVINRARNHI-----STDTNKIENMIAKLEESQKNAERDWKEAEELR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++++ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEAIIREL-RQLRKAQLA 603
Query: 550 EI--NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
+ + LI+ A E + + P G++V V + G K + +
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQKVKVKNTAPKQQLRP--GDEVKVLTFGQKGQLLKK 661
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V D VQ G ++++VK++++ I KQ E + + +
Sbjct: 662 V--SDSEWNVQIGILKMKVKESDMEYINTP-------------KQLEKKAVATVKGRDYH 706
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
S LDLRG R E A ++ D LA + S +IHG GTG +++
Sbjct: 707 VSL---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V + L+NH V +Y G TV +K
Sbjct: 755 VQDYLKNHRGVKSFRYGDMGEGGLGVTVVELK 786
>gi|392531789|ref|ZP_10278926.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 788
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 220/723 (30%), Positives = 344/723 (47%), Gaps = 99/723 (13%)
Query: 44 ILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
++D AS+ L+ IR KR+ N LDSL++ AQ + L+T R R + +
Sbjct: 146 VMDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVTMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA ++ G+ + SS+G T F+EP+ V+ NN +L E E IL+ L+ EIA
Sbjct: 201 KAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDRILAELSNEIA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
EI M + ++D A+A + + + P+++ ++ V F + +HPL+
Sbjct: 260 PYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA------RHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
K V N DI + + + +VITGPNTG
Sbjct: 312 --------------DEKQAVAN-------------------DILIGGDYQALVITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAVVTTHYADLSC 395
V IL + +SL+L DE+G+GTDP EG ALA +IL D+VG + TTHY +L
Sbjct: 399 VSILNKIDNKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVMATTHYPELKA 454
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
NA+ EF +ETL PTYR+L G G SNA I+K +G D +I A+ L+
Sbjct: 455 YGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVIDSARSLI--- 511
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ + +E+ L R+ E + E LY+++ + L
Sbjct: 512 --DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQFFGEREDLVK 569
Query: 516 KETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 572
K ++ Q ++ A+ + +V D QL + IKE E A + + H +
Sbjct: 570 KAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAKSKLANLHHEE 625
Query: 573 --DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
V + + + G++V V S G + + +V G++ LVQ G +++++K+++
Sbjct: 626 TLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLGILKMKIKESD 683
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
+ A P K+ + + SSN+ V T LDLRG R E
Sbjct: 684 M---------TLAQP----EKEPTRKMVATVRSSND-----SHVST---QLDLRGERYES 722
Query: 691 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 748
A ++D L A + ++HG GTG +++ V E L+NH V K+E +P N G
Sbjct: 723 ALSEMDQYLDAALLAGYPQVTIVHGKGTGALRQGVTEALKNHRSVKKFET-APQNQGGNG 781
Query: 749 AYI 751
A I
Sbjct: 782 ATI 784
>gi|356498910|ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
Length = 792
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 190/587 (32%), Positives = 298/587 (50%), Gaps = 83/587 (14%)
Query: 94 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 153
R CV + + K G+ L+ S SG +EP AV N+ R + + E +L
Sbjct: 239 RWCVRVDSGQKTSF-KGLLLS-SGSGVGSTIEPLSAVPLNDELQRARSLVVKAEADVLLA 296
Query: 154 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL-------SSQSHVSFDSS 206
LT ++ +I+ ++ ++E+D+ ARA + G P + SS + S
Sbjct: 297 LTKKMQLDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHIFLPDRSSSSTAEAFLPRS 356
Query: 207 INIEG--------------IKHPLLLGSSLRSLSAASSNSNPLKSD--VENSEMTVGSLS 250
N+ G HPLLL L A N N SD ++N+
Sbjct: 357 ENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAALDNAP------- 409
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
PVP+D V +TRV+VITGPNTGGKT +KT+GLA++M+K+GLY+ A ++P
Sbjct: 410 ------PVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESAQIP 463
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
WFD + ADIGD QSL Q+LSTFSGH+ +I +I + +SLVL+DE+G+GT+P EG AL
Sbjct: 464 WFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPLEGAALG 523
Query: 371 TSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
++L+ + +D L + TTH+ +L LK D FENA EF L+PTY++LWG G S
Sbjct: 524 MALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLWGVPGRS 583
Query: 430 NALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQ----------HRKS 465
NA+NIA+ +G ++ A+ L +ERL+ E Q+ H +
Sbjct: 584 NAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHYLRHSRG 643
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
LY SL+ RRK+ + +L + M R++ EA + R H K +E ++
Sbjct: 644 -LYNSLLNTRRKI---IEYSTNLRFKKM---RDV-SEAAAMARSILHKKVRELDASAKQP 695
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
+ I + N+ + + ++ ++ +S S++ F+ S ++ S
Sbjct: 696 SQNNKTISSSNLSATNKSQTVAENKEPTIADKSASSVKV----------FNRSRSDKSG- 744
Query: 586 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
P+ G+ VHV SLG K TV++V ++VQ G M++++K +I+
Sbjct: 745 PPKVGDMVHVSSLG-KQVTVLKVDSSKGEIVVQAGNMKLKLKLTDIQ 790
>gi|430860620|ref|ZP_19478219.1| MutS2 protein [Enterococcus faecium E1573]
gi|430552018|gb|ELA91768.1| MutS2 protein [Enterococcus faecium E1573]
Length = 786
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T+V G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLVRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|300811593|ref|ZP_07092077.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497453|gb|EFK32491.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 786
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 230/729 (31%), Positives = 348/729 (47%), Gaps = 114/729 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 147 VLDTASADLARLRHGR---LATEAEIKEKMTAYTRGKNGQYLSEQIVTIRDDRYVIPVKQ 203
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 204 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 258
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 259 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPTLSA------DQSFKLLGARHPLI 312
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 313 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 337
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 397
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 398 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 457
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 458 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 517
Query: 458 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 508
+ H EL + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 518 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 576
Query: 509 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
K K+ ++ EL A+ +QI T NQL DA E N L K+
Sbjct: 577 NEIVAKKRKKADKIIAELEEARKEGMQIKT------NQLMDAKG-EFNQLAKQ------- 622
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
EA+ + V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 623 --EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKL 676
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+V +I + +++ A A+ R +++SLDLR
Sbjct: 677 KVTDRDIDKLATGQKQQA----------------------QRRATSASRSSRARSSLDLR 714
Query: 685 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 715 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 773
Query: 743 NYGCTVAYI 751
N G T A I
Sbjct: 774 NEGGTGATI 782
>gi|340751175|ref|ZP_08687998.1| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
gi|340562266|gb|EEO36747.2| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
Length = 778
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 216/731 (29%), Positives = 359/731 (49%), Gaps = 117/731 (16%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS DL IR +K N+ ++ + A + +IT+R R V +KA
Sbjct: 143 IKDDASLDLRDIRIHKKTLSMNIKRKFDELFDEPSFAKAFQERIITERDGRSVVPVKADF 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K L+ GI + SSSG T F+EP V NN L E E IL +T + +
Sbjct: 203 KGLIK-GIEHDRSSSGQTVFIEPLSIVALNNKMRELELKEKEEIRKILLRITEHVRNNRE 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I + + +L +D+ ARA + + V P ++++ +S + +HP +
Sbjct: 262 DIDAVGEAILSLDILNARAVYGIEKNCVIPNINNREMLSLVDA------RHPFI------ 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
P +D VP+ ++ + ++ITGPNTGGKT
Sbjct: 310 ----------P-------------------ADKIVPLTFEIGKDYNTLLITGPNTGGKTV 340
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT GL +LM+ +G+ +PA H + +F + ADIGD QS+EQ+LS+FS H+ + +IL
Sbjct: 341 ALKTAGLLTLMALSGIPIPAHEHTSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEIL 400
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V++ SLVL+DE+GSGTDP EG A A +++ YLRDR + +TTHY+++ +
Sbjct: 401 ESVNKSSLVLLDELGSGTDPIEGSAFAMAVIDYLRDRKCKSFITTHYSEVKAHGYNEEGI 460
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-------KLVERLR 456
E A+ EF + TL PTYR+L G G+SNAL IAK +G ++I++A+ K +E++
Sbjct: 461 ETASMEFDVNTLSPTYRLLIGIPGESNALTIAKRLGVSDEVIEKAKSYIGDDNKKIEKMI 520
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--------DR 508
++ K++ +++ ++ L++ A+ +AE + R +E E ++ D+
Sbjct: 521 ANIKE--KADELEAMKQQVEFLKAAAQRDRDEYAEKL---RVLEKEKNEILKEAYEKADK 575
Query: 509 RAAHLKAKE---TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
++AK +++Q+E N K + VQ N LR A D+ N ++E + IA
Sbjct: 576 MMKEMQAKAVALVEKIQKEEN--KKEDVKNVQKSLNMLRSALQDDRNKNVEE-KPKIARK 632
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
V D+ V G++V V SL ++ A V+++ G +TV VQ G +++
Sbjct: 633 V-------DYKV------------GDKVFVNSL-NQFANVLKINGGKETVQVQAGILKLE 672
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V +D + + E ++ + +N +DLRG
Sbjct: 673 V-------------------------SMDDVKVVKEKAKKEYNTFSHTKTSVRNEIDLRG 707
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESP 741
V+EA ++L+ L A S + +++IHG GTG ++E +L L+ V +Y
Sbjct: 708 KMVDEAVYELETYLDRAVMNSYTEVYIIHGKGTGALREGILNYLKKCRYVKEYRLGGHGE 767
Query: 742 MNYGCTVAYIK 752
GCTV +K
Sbjct: 768 GGLGCTVVTLK 778
>gi|423470753|ref|ZP_17447497.1| MutS2 protein [Bacillus cereus BAG6O-2]
gi|402434491|gb|EJV66529.1| MutS2 protein [Bacillus cereus BAG6O-2]
Length = 786
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 224/739 (30%), Positives = 356/739 (48%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLG 599
+ + LI+ E A +V+ + V+ NT+ P G++V V + G
Sbjct: 602 LVNVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLKKV--SDTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKNY 768
>gi|392988863|ref|YP_006487456.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
gi|392336283|gb|AFM70565.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
Length = 786
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 211/720 (29%), Positives = 343/720 (47%), Gaps = 95/720 (13%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQTVREQLDGIVRGKNAKY-----LSDTIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK VE NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFVEPKQIVELNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ EI + + ++DL A+A F + + + P +S ++HV + +HPL
Sbjct: 257 ELVPHRHEIIHNAYVIGKLDLMNAKARFGKELKAIVPAISVENHVILKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + E + +VITGP
Sbjct: 311 I-----------------------DQEKVVAN------------DISIGKEYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM ++GL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQSGLPIPVDEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILAHVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D+ +I A++L +
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDQSVINEAKQL---MN 512
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
E Q +E+ L R+ E++ E +LY +++ + K
Sbjct: 513 DESQD--LNEMIADLENRRKMAETEYLEMRHYVDEAQELYENLKEAYRYFFEEREKEIEK 570
Query: 517 ETQQVQQELNFAKVQIDTVVQD---FENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
++ + ++ A+ + ++ D + Q+ + E + LI E +
Sbjct: 571 AKKKANELVSEAQENAEKIIADIRKMQQQVGQGNVKE-HQLIDAKTKLANLHQEEQLKKN 629
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
+ P G++V V + G + T++ G+ V+ G +++ V ++ + P
Sbjct: 630 KVLKKAKEQKTLKP--GDEVLVTTYGQR-GTLLRKNGEQWQ--VEIGILKMNVSESELTP 684
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ AP Q+E +Q +E AS+ N LDLRG R EEA
Sbjct: 685 V-----------AP----QKEPKQRVIHAVRSESASH------VSNQLDLRGKRYEEALS 723
Query: 694 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
++D L A + ++HG GTG +++ + + L+NH V +E +P N G A I
Sbjct: 724 EVDQYLDSAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFEF-APANQGGNGATI 782
>gi|303230741|ref|ZP_07317488.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302514501|gb|EFL56496.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-049-V-Sch6]
Length = 792
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 208/738 (28%), Positives = 356/738 (48%), Gaps = 89/738 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 69
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 130 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
VE NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VELNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA++
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPAEHG 361
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 487 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+ + D+ S I + I+ + H P+ + S G+ V+V SL L
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
TV+ + G+ TV + V+V ++ R N +++ P+ RK + G+A
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKTRK----KAGGTA 706
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 719
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 720 KERVLEILRNHPRVAKYE 737
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|429506149|ref|YP_007187333.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|429487739|gb|AFZ91663.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 785
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 364/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|423452167|ref|ZP_17429020.1| MutS2 protein [Bacillus cereus BAG5X1-1]
gi|401142238|gb|EJQ49787.1| MutS2 protein [Bacillus cereus BAG5X1-1]
Length = 786
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 224/739 (30%), Positives = 356/739 (48%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLG 599
+ + LI+ E A +V+ + V+ NT+ P G++V V + G
Sbjct: 602 LVNVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLKKV--SDTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|394991851|ref|ZP_10384649.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
gi|393807396|gb|EJD68717.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
Length = 785
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 364/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|126698288|ref|YP_001087185.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|123363473|sp|Q189Q3.1|MUTS2_CLOD6 RecName: Full=MutS2 protein
gi|115249725|emb|CAJ67542.1| DNA mismatch repair protein [Clostridium difficile 630]
Length = 792
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 361/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSILRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +K+ ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L + ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ + ++ ++ E
Sbjct: 547 IEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + +++ RK+ + + + +SGS
Sbjct: 664 VDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVTKSTRNIIRSKSGSV------ 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 714 ----------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|70726818|ref|YP_253732.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus haemolyticus JCSC1435]
gi|82592981|sp|Q4L5E9.1|MUTS2_STAHJ RecName: Full=MutS2 protein
gi|68447542|dbj|BAE05126.1| MutS-like protein [Staphylococcus haemolyticus JCSC1435]
Length = 783
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 349/744 (46%), Gaps = 107/744 (14%)
Query: 23 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 78
+ E+ EK C + D AS +L+ IR++ +R +NLD ++K A Q
Sbjct: 133 SDLFQEINEK------CDTHDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQANQ-- 184
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
+ +IT R R + +KA ++ GI + S+SG T ++EP VE NN R
Sbjct: 185 --KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMNNQISR 241
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSS 197
L N E E IL+ LT +A +E + + + V+ +ID A+A +A+ + G P
Sbjct: 242 LRNDEAVERERILTELTGMVA-AEADGCLIAESVMGQIDFLTAKARYARSIKGTKPTFYK 300
Query: 198 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 257
D ++ + HPLL N + V + + + D
Sbjct: 301 ------DRTVYLPNAYHPLL-----------------------NKDTVVANTIEFVDDI- 330
Query: 258 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 317
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+ +
Sbjct: 331 -----------ETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYC 379
Query: 318 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 377
DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SIL ++
Sbjct: 380 DIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHV 439
Query: 378 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 437
R+ L + TTHY +L NA+ EF + TL PTY++L G G SNA +I++
Sbjct: 440 REIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRK 499
Query: 438 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 497
+G II +A+ ++ + + + +SL + ++++ Q L E +
Sbjct: 500 LGLSLGIINKAKTMI-----GTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEARKTHD 554
Query: 498 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 557
++E + + L + ++ Q + A + D+++++ LRD + +KE
Sbjct: 555 DLEHQYEQYKSYEKKLMDEAKEKANQRVKSATKEADSILKELRT-LRDQKGAD----VKE 609
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDD 612
E I + + DD + + ++ G++V V S G K V +
Sbjct: 610 HE----LIDKKKQLDDQYEAKSLKQNVQKQKYDEIHAGDEVKVLSYGQK--GEVLELVSE 663
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+ +VQ G +++++ PI + ++ P +++R
Sbjct: 664 EEAVVQMGIIKMKL------PIEDLEKTKKKKEKPSKMVTRQNR---------------- 701
Query: 673 RVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
QT K L LRG R EEA +LD I A + +++IHG GTG +++ V L H
Sbjct: 702 --QTIKTELHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLNKH 759
Query: 731 PRVAKYEQESPM--NYGCTVAYIK 752
V Y P +G TVA +K
Sbjct: 760 KSVKSYRGGMPSEGGFGVTVAELK 783
>gi|423082167|ref|ZP_17070762.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
gi|423085790|ref|ZP_17074229.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357548912|gb|EHJ30766.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357549417|gb|EHJ31264.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
Length = 792
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 360/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +KA ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++P + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPVDYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L + ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ + ++ ++ E
Sbjct: 547 IERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + +++ RK+ + + + +SGS
Sbjct: 664 VDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVTKSTRNIIRSKSGSV------ 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 714 ----------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|384266410|ref|YP_005422117.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899448|ref|YP_006329744.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
gi|380499763|emb|CCG50801.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173558|gb|AFJ63019.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
Length = 785
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 363/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLENSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|295397442|ref|ZP_06807529.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
gi|294974343|gb|EFG50083.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
Length = 793
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 216/697 (30%), Positives = 346/697 (49%), Gaps = 112/697 (16%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
+A + + +IT R +R + +K ++ G+ + SSSG T ++EP+ ++ NN
Sbjct: 180 KASYLSEAIITIRNNRFVIPVKQEYRNAF-GGVVHDQSSSGQTLYIEPQTVLDANNHLRS 238
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L E E I L+AE+A EI R+ ++DL A+ FA+ + PIL+++
Sbjct: 239 LQVQEDEEIKRIFQELSAELAPYTSEIAENNQRLGDLDLIQAKFFFAREIGANRPILANE 298
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
S I+++ +HPLL KS V N
Sbjct: 299 S-----ERIDLKEARHPLL----------------DRKSVVAN----------------- 320
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI E ++VITGPNTGGKT ++KT+GL LM+++GLY+ AK R+ F+ I AD
Sbjct: 321 --DIHFSHEYNMIVITGPNTGGKTITLKTVGLLQLMAQSGLYITAKADSRVEIFNEIFAD 378
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ--- 375
IGD QS+EQ+LSTFSGH++ I+ I+E SLVLIDE+GSGTDP EG A+A ++L
Sbjct: 379 IGDEQSIEQSLSTFSGHMTNIIRIVEAADEHSLVLIDELGSGTDPQEGAAIAIAVLNRFA 438
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
+L RV + TTHY +L + NA+ EF+ TL PTY++L G G SNA +I+
Sbjct: 439 FLNARV---MATTHYPELKTYAYEHPGAINASMEFNEITLEPTYKLLIGVPGRSNAFDIS 495
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G ++++ A+ ++ E Q+L E LE+Q L AE
Sbjct: 496 QRLGLPVEMVEEARSYIQ------------EDSQNLNEMLLDLEAQRHEYEDLSAEAAKD 543
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL- 554
+ E+ DL + A L+A + Q +N A+ + + +V+D + + DA EI
Sbjct: 544 LADAENLLNDLKKAQARLEADK----QTYMNRARKEANQLVEDTKTKA-DAILAEIREWQ 598
Query: 555 --------IKESE-----SAIAAIVEAHRPDDDFSVSETN-----TSSFTPQFGEQVHVK 596
IKE E SA++ + + + + + + + +SF + G++V+V
Sbjct: 599 INHPTIGNIKEHEMIDRQSALSNLTQEEQLEKNKILQKAKKNKERKASF--EVGDEVNVL 656
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
+ G + T+VE D +VQ G +++ V + ++ + +K +++
Sbjct: 657 TYGQR-GTLVEKREKD--WVVQMGMLKMEVAEKDLTLVDEKPKK------------EKNH 701
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 714
++G S + ++ SLDLRG R EEA +L+ I A + +IHG
Sbjct: 702 RAGLKAS---------KAKSVNTSLDLRGERYEEAMIRLNNFIDSALLAGHGQVTIIHGH 752
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
GTG +++ V L+NHPRV +E +P N G A I
Sbjct: 753 GTGALRQGVQMALKNHPRVESFEF-APYNMGGNGATI 788
>gi|429759588|ref|ZP_19292086.1| MutS2 family protein [Veillonella atypica KON]
gi|429179549|gb|EKY20796.1| MutS2 family protein [Veillonella atypica KON]
Length = 792
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 208/738 (28%), Positives = 355/738 (48%), Gaps = 89/738 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 69
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 130 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
VE NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VELNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
P DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA++
Sbjct: 313 -----------APTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPAEHG 361
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 487 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQDDAESMKRSLRVEGEAIIKQLKAQF 594
Query: 544 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 603
+ + D+ S I + I+ + H P+ + S G+ V+V SL L
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
TV+ + G+ TV + V+V ++ R N +++ P+ RK + GSA
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKTRK----KAGGSA 706
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 719
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 720 KERVLEILRNHPRVAKYE 737
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|227888700|ref|ZP_04006505.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
gi|227850727|gb|EEJ60813.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
Length = 788
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 220/751 (29%), Positives = 351/751 (46%), Gaps = 98/751 (13%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 73
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKF-GGVVHDQSASGQTLFVEPQAVLVLN 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEINRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+L+ Q HV I + +HPL+ NP K
Sbjct: 294 VLN-QDHV-----IKLRKARHPLI---------------NPKKV---------------- 316
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + LVLIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAI 432
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNETVVNKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 542
++ D++ L R+ + QQVQ++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
V+ D VQ G ++V+V ++ I A A R
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAAPKKAERAVR-------------- 699
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
+S G R + + LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 700 -----SSRGLRSTRASSELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKRNRHVKSYSY-APANQGGTGATI 784
>gi|451345992|ref|YP_007444623.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
gi|449849750|gb|AGF26742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
Length = 785
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 358/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + SL E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHL---KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 557
+ +L+ + + ++ + + QI ++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAERKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPER----KTEKKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|452856510|ref|YP_007498193.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080770|emb|CCP22535.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 785
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 364/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAEQKAAEKLEAAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|414084421|ref|YP_006993129.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
gi|412998005|emb|CCO11814.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
Length = 788
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 220/723 (30%), Positives = 344/723 (47%), Gaps = 99/723 (13%)
Query: 44 ILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
++D AS+ L+ IR KR+ N LDSL++ AQ + L+T R R + +
Sbjct: 146 VMDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVTMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
KA ++ G+ + SS+G T F+EP+ V+ NN +L E E IL+ L+ EIA
Sbjct: 201 KAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDRILAELSNEIA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
EI M + ++D A+A + + + P+++ ++ V F + +HPL+
Sbjct: 260 PYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA------RHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
K V N DI + + + +VITGPNTG
Sbjct: 312 --------------DEKQAVAN-------------------DILIGGDYQALVITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAVVTTHYADLSC 395
V IL + +SL+L DE+G+GTDP EG ALA +IL D+VG + TTHY +L
Sbjct: 399 VSILNKIDDKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVMATTHYPELKA 454
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
NA+ EF +ETL PTYR+L G G SNA I+K +G D +I A+ L+
Sbjct: 455 YGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVIDSARSLI--- 511
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ + +E+ L R+ E + E LY+++ + L
Sbjct: 512 --DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQFFGEREDLVK 569
Query: 516 KETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 572
K ++ Q ++ A+ + +V D QL + IKE E A + + H +
Sbjct: 570 KAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAKSKLANLHHEE 625
Query: 573 --DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
V + + + G++V V S G + + +V G++ LVQ G +++++K+++
Sbjct: 626 TLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLGILKMKIKESD 683
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
+ A P K+ + + SSN+ V T LDLRG R E
Sbjct: 684 M---------TLAQP----EKEPTRKMVATVRSSND-----SHVST---QLDLRGERYES 722
Query: 691 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 748
A ++D L A + ++HG GTG +++ V E L+NH V K+E +P N G
Sbjct: 723 ALSEMDQYLDAALLAGYPQVTIVHGKGTGALRQGVTEALKNHRSVKKFET-APQNQGGNG 781
Query: 749 AYI 751
A I
Sbjct: 782 ATI 784
>gi|225386433|ref|ZP_03756197.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
DSM 15981]
gi|225047464|gb|EEG57710.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
DSM 15981]
Length = 805
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 204/661 (30%), Positives = 320/661 (48%), Gaps = 82/661 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +K+ +K +P G+ + S++G+T F+EP V NN L E E
Sbjct: 190 VITMRDGRYCLPVKSEYKNQVP-GMVHDQSATGSTLFIEPMAIVRLNNEIRELEIREQKE 248
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
A+L+ L+ + A ++ M + ++D FA++ A+ P+ + + +
Sbjct: 249 IEAVLADLSNQAAPHCEDLAIDMQLLAQLDFIFAKSALARHYRCSAPVFNDRGY------ 302
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+I+ +HPLL ++ VPI + +
Sbjct: 303 IHIKDGRHPLLDPKTV-----------------------------------VPISVWLGK 327
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++++TGPNTGGKT S+KT+GL +LM +AGL++PA L FD + ADIGD QS+E
Sbjct: 328 DFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAWEGSELAVFDQVFADIGDEQSIE 387
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L + +
Sbjct: 388 QSLSTFSAHMTNIVRILGEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKCRTMA 447
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L ENA+ EF++ETL+PTYR+L G G SNA I+ +G II
Sbjct: 448 TTHYSELKVFALSAPGVENASCEFNVETLQPTYRLLIGVPGKSNAFAISSKLGLPDYIID 507
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ + E + +L SL + R +E + + EI L + + + L
Sbjct: 508 DAKTHL-----EAKDESFEDLLSSLEKSRLTIEKEQEELKAYKDEIAQLKARLTQKEERL 562
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
D R L ++ Q+ L AK D ++ Q+ SAD + L K+ E+ A +
Sbjct: 563 DERKDKLLKNAAEEAQRILREAKETADQTIK----QINKLSAD--SGLNKQLEAQRAKLR 616
Query: 567 EAHR-PDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
E + DD ++ S +P + G+ V V S+G K TV +P + VQ G
Sbjct: 617 EKLKEADDKLAIKAKGPSQPISPKKLKVGDGVKVLSMGLK-GTVSTLPNARGDLYVQMGI 675
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSN----EEASYGPRVQT 676
+R V ++ +P ++ P+ P + + GSSN + AS P V
Sbjct: 676 LRSLVNVKDLELLP---EQDITGPSIPSSGGGKFSGKGRGTGSSNIKVSKSASISPEV-- 730
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
+L GM V+EA ++ L A + + V+HG GTG +K V H R+
Sbjct: 731 -----NLIGMTVDEAMPVMEKYLDDAYLAHLTTVRVVHGRGTGALKNAV------HTRLK 779
Query: 735 K 735
K
Sbjct: 780 K 780
>gi|255099823|ref|ZP_05328800.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-63q42]
gi|255305708|ref|ZP_05349880.1| putative DNA mismatch repair protein [Clostridium difficile ATCC
43255]
Length = 792
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 360/731 (49%), Gaps = 88/731 (12%)
Query: 15 PLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
P+++ L N ++ ++E++I I ++ I D AS L IR + +++ S L +
Sbjct: 117 PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLRDIRRRIAQKNQSIRSKLNSI 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + +I+ R R V +K+ ++ + GI + SSSGAT F+EP VE N
Sbjct: 176 ISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVHDQSSSGATLFIEPMTIVEMN 234
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E ILS L+A + + ++ + + +D AF++ + M G+ P
Sbjct: 235 NELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEP 294
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
L+ D +NI+ +HPLL + ++ ++ G
Sbjct: 295 TLNE------DKYLNIKNGRHPLL----------------------DKKKVVANTIYLG- 325
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
DF +VITGPNTGGKT ++KT+GL +LM+++GL++PA + +D
Sbjct: 326 RDF------------HTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYD 373
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+ DE+G+GTDP EG ALA ++
Sbjct: 374 NVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAV 433
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ + + TTHY++L ENAA EF +ETL PTY++L G G SNA
Sbjct: 434 LEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYKLLIGVPGKSNAFE 493
Query: 434 IAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G +I RA++ + E + E ++ Q++ + R K A L E
Sbjct: 494 ISRKLGLSDYVISRAKEYINTENIALE-------DVLQNVEKNRIKAVEDREEAERLKEE 546
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 551
I L E +++ + L + + K + + AK ++D ++++ + ++ ++ E
Sbjct: 547 IEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEK 606
Query: 552 NSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
N I+E + + + + +P VS P GE+V V +L +VV
Sbjct: 607 NRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP--GEEVKVITLNQN-GSVVS 663
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
V +VQ G M++ + +++ RK+ + + + +SGS
Sbjct: 664 VDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVTKSTRNIIRSKSGSV------ 713
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 722
KN +DLRG+ +EEA ++ D +A ES + VIHG+GTGV+K
Sbjct: 714 ----------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGLES---VTVIHGIGTGVLKAG 760
Query: 723 VLEILRNHPRV 733
+ +ILR + V
Sbjct: 761 LQDILRRNRHV 771
>gi|229169279|ref|ZP_04296990.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
gi|228614174|gb|EEK71288.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
Length = 786
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 221/740 (29%), Positives = 354/740 (47%), Gaps = 106/740 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKIEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++++ I KQ E +
Sbjct: 653 GQKGQLLKKVS--DTEWSVQIGILKMKVKESDMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S + S LDLRG R E+A +++ L A S + +IHG GT
Sbjct: 698 ASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKTY 768
>gi|317502262|ref|ZP_07960435.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336440304|ref|ZP_08619896.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896377|gb|EFV18475.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336013585|gb|EGN43462.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 791
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 218/725 (30%), Positives = 340/725 (46%), Gaps = 93/725 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---G 82
LT L +I CI I D S+D +R++ NL+ + + +
Sbjct: 128 LTPLSNEIERCI-----ISEDEISDDASSALKHIRRSINNLNDRVHTTLSGLVNGSLRTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ LIT R R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L
Sbjct: 183 LQDALITMRGDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQ 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ E A+ EI+ + ++D FAR A M PIL+ +
Sbjct: 242 EQDEIRKILASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
I I +HPLL + VPI +
Sbjct: 300 ----IRIREGRHPLLDQKKV-----------------------------------VPITV 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ E +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD
Sbjct: 321 SLGDEFSLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPG 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II A+K R Q +L L RR +E + A+ E L R+ +
Sbjct: 501 YIIDDAKK-----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE-- 559
+ L+ + + + ++ L AK D +++F + + SA E+ KE E
Sbjct: 556 QEKLEEQRDRIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERL 612
Query: 560 ------SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
++ +A ++ ++P + S+ + GE V V S+ + T+ +P
Sbjct: 613 RKKIKDTSASASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARG 664
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
V VQ G +R +V +++ I + + AP+ + +R + S ++ S P
Sbjct: 665 NVTVQMGILRSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPE 715
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+ +L G V+EA +LD L A + + V+HG GTG +++ + E LR
Sbjct: 716 I-------NLLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQK 768
Query: 732 RVAKY 736
V Y
Sbjct: 769 HVKSY 773
>gi|149183061|ref|ZP_01861514.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
gi|148849242|gb|EDL63439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
Length = 786
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 220/723 (30%), Positives = 344/723 (47%), Gaps = 98/723 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAG 81
LT LE KI +D ILD AS+ L IR++ + N E L+ +++ AQ
Sbjct: 130 LTPLEHKIKAVVDENG-AILDSASDSLRQIRSQIRANEGRIREKLERMIRSSNAQKM--- 185
Query: 82 GIDKPLITKRRSRMCVGIKASHK--YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 139
+ +IT R R + +K ++ Y GI + SSSG T F+EP+ V NN L
Sbjct: 186 -LSDAIITIRNDRYVIPVKQEYRGNY---GGIIHDQSSSGQTLFIEPEVIVSLNNALREL 241
Query: 140 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E E IL+ LT E++ ++ ++ + +ID F +A + + + G P
Sbjct: 242 KLKEGQEIEKILTELTVEVSVFSEDLLTIVSVLADIDFMFTKAKYGKSIKGTKP------ 295
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
++ + + + +HP+L P+ V N
Sbjct: 296 EINGNQVLKLNRARHPML----------------PIDEAVAN------------------ 321
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
DI++ + +VITGPNTGGKT ++KT+GL +LM+++GL +PA + + F + ADI
Sbjct: 322 -DIELGKDFSSIVITGPNTGGKTVTLKTIGLLTLMAQSGLQIPALDGSEMGVFQNVYADI 380
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQ+LSTFS H+ IVDIL V ESLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 GDEQSIEQSLSTFSSHMVNIVDILGKVDHESLVLFDELGAGTDPQEGAALAISILDEVHQ 440
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 RGAKVVATTHYPELKAYGYNRDGVVNASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLG 500
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
++I RA+ + E + + SL + R+ E+ A L + +++++
Sbjct: 501 LADRVIDRAKSHIGTDSKEIEN-----MIASLEKSRKDAEADYDEAHELLKQAEMMHKDM 555
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
+ + + + L K + Q + AK + + V++D + SA+ IKE E
Sbjct: 556 QKQMMEFYEKRDSLYEKAEVKASQVVEKAKEEAEGVIRDLRKMRLEKSAE-----IKEHE 610
Query: 560 SAIA-AIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVL 616
A +E P+ + S + +S + G++V V S K V +V ++
Sbjct: 611 LIDARKRIEGAAPELNRSKPKKTNASQKRELKPGDEVKVLSFDQKGHLVEKVSKNE--WQ 668
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
VQ G M+++VK+++++ I K+ P + +D G
Sbjct: 669 VQMGIMKMKVKESDLQFIQAEKK---VETKPLATVKGKDFHVGL---------------- 709
Query: 677 SKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A +D AL R + +IHG GTG +++ V E L+NH
Sbjct: 710 ---ELDLRGERFENALSRVEKYVDDALLAGYPR--VSIIHGKGTGALRQGVQEYLKNHRS 764
Query: 733 VAK 735
V +
Sbjct: 765 VKR 767
>gi|148543773|ref|YP_001271143.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|184153179|ref|YP_001841520.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227363247|ref|ZP_03847379.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|325682145|ref|ZP_08161663.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
gi|148530807|gb|ABQ82806.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|183224523|dbj|BAG25040.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227071703|gb|EEI09994.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|324978789|gb|EGC15738.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
Length = 791
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 328/679 (48%), Gaps = 90/679 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 146 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPQRV--------------------VTNDI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGISL 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDNSQDLNNMIGDLVEQRKKAREESEKLAKLVAKNEKVQRDLDEK 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESA 561
+ + L + + +++ AK + D ++ +++ + N LI +++
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRIIHHLRQLEVQQGGNVKENELI-DAQGQ 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ A+ + SV + G+ V VKS G + ++ G+ VQ G
Sbjct: 616 LNALHHDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-VQIGI 673
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR-----VQT 676
+++ + +NN+ + A PR ++A PR QT
Sbjct: 674 LKMEIDENNLEKV-------AKKDLPR----------------EKDAKRRPRAAVRTTQT 710
Query: 677 SKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PR
Sbjct: 711 RKTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPR 770
Query: 733 VAKYEQESPMNYGCTVAYI 751
V + SP N G A I
Sbjct: 771 VKSFSYASP-NAGGDGATI 788
>gi|403253752|ref|ZP_10920053.1| DNA mismatch repair protein [Thermotoga sp. EMP]
gi|402811286|gb|EJX25774.1| DNA mismatch repair protein [Thermotoga sp. EMP]
Length = 757
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 223/745 (29%), Positives = 341/745 (45%), Gaps = 101/745 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS L E + E E++ CI+ I DRAS L IR E+KR L S +K+
Sbjct: 106 YSRLKETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKR 160
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A + + + + R R +KAS K + GI ++SSSGAT F+EP V
Sbjct: 161 KADDFVRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-KGIVHHLSSSGATVFLEPDEFV 219
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L E E + IL LT + ++++ ++ + D +AR FA+ +G
Sbjct: 220 ELNNRVRLLEEEERLEISRILRQLTNILLSRLKDLERNVELIARFDSLYARVKFAREFNG 279
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V S I + +HPL+ +
Sbjct: 280 TV--------VKPSSRIRLVNARHPLIPKERV---------------------------- 303
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L
Sbjct: 304 -------VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELK 356
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA
Sbjct: 357 VFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALA 416
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+I++ L ++ VTTH + NA+ EF ETL PTYR+L G G S+
Sbjct: 417 IAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSH 476
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G D++I++ A R R +++ L +SL E+ LE + R
Sbjct: 477 AFQIAEKLGLDKRIVENA-----RSRLSQEEMELEGLIRSLHEKISLLEEEKRKLQKERE 531
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E M L + E++ K L R +E +++ + K ++D + + + S DE
Sbjct: 532 EYMKLREKYEEDYKKLRRMKIEEFDRELRELNDYIRKVKKELDQAI----HVAKTGSVDE 587
Query: 551 INSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +K +E + D + + E P G+ V ++ G + VVEV
Sbjct: 588 MREAVK--------TIEKEKKDLERKRIEEAPEEEIKP--GDHVRMEG-GTSVGKVVEVK 636
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
G DT LV +G +R++V P +LRK ++ S
Sbjct: 637 G--DTALVDFGFLRLKV------------------PVSKLRKTKK-----EEKKETSTFS 671
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
Y P T + +D+RGM VEEA + I S ++IHG GTG + V EIL
Sbjct: 672 YKP--STFRTEIDIRGMTVEEAEPVVKKFIDDLVMNGISKGYIIHGKGTGKLASGVWEIL 729
Query: 728 RNHPRVAKYEQESPMNYGCTVAYIK 752
R RV + +P G V ++
Sbjct: 730 RKDKRVVSFRFGTPSEGGTGVTVVE 754
>gi|306490800|gb|ADM94921.1| mismatch repair ATPase [uncultured candidate division JS1
bacterium]
Length = 790
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 218/755 (28%), Positives = 358/755 (47%), Gaps = 128/755 (16%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 84
LE+ I I+ +L I+ D AS L+ IR + ++ E L++++K ++ I
Sbjct: 132 LEKTIKDSINEELQIV-DDASPLLKKIRQKIHSIERKIKEKLENIIKDPQNRLI----IQ 186
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+IT R+ R + +K K P G+ + S SG T FMEP VEFNN L E
Sbjct: 187 DDIITIRQGRYVIPVKQQEKGKFP-GVIHDKSESGVTVFMEPLPVVEFNNELRELYQDEK 245
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
EE IL LTA + ++ EI Y + E+D A+A + M V P ++ Q
Sbjct: 246 QEEYRILQKLTALVGQNGEEILYSYQILGELDFINAKAKLSIKMKAVEPQINEQG----- 300
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I++ +HPLL K+ V VPIDI++
Sbjct: 301 -IIHLYKARHPLL------------------KNKV------------------VPIDIEL 323
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +++ITGPNTGGKT ++KT+GL +LM+++GL++P + + F I ADIGD QS
Sbjct: 324 GEKFEILIITGPNTGGKTVTLKTVGLLTLMAQSGLHIPVEVDSEVAIFKKIFADIGDEQS 383
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS HI I+ ILE + SLVL+DE+G+GTDPSEG ALA +IL L+ +
Sbjct: 384 MEQSLSTFSAHIQNIIHILEEADQYSLVLLDELGAGTDPSEGSALAMAILDLLKSKGAKV 443
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
+ TTH+ L NA EF +TL+PTY+I G G S A +A+ +G +
Sbjct: 444 LSTTHHDSLKAYAYLTEGVMNAKVEFDEKTLKPTYKISIGLPGKSCAFAVAQRLGLPEMV 503
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR--------TAASLH------A 490
+ +A+ Q L++E+ LE+ R AASL
Sbjct: 504 LDKAE-------------------QYLVKEKLDLENLIRKMEKDKDQVAASLQYIKREKG 544
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-- 548
+I L +E+E++ L +K + Q+ ++ L+ A+ + +++ + + D A
Sbjct: 545 QISQLKKELEEKIGALQEEEKKIKLEAYQEAEKILSLAQTRAKEMIKSLKRKKYDGEAFV 604
Query: 549 DEINSL--IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
EI +L +KE A + + F + G++V + SLG + T++
Sbjct: 605 QEIKALEDVKEDIKKEATKYTLRQAVNHF------------EKGDRVFINSLGRE-GTIL 651
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS------KRKNAANPAPRLRKQQEDRQSGS 660
E +Q +R+++ ++++ +P ++ N P L +
Sbjct: 652 EKNEKKKQYTIQVANLRLKIPVSDLKQVPQGDFSNIDRKTNIEEAFPPLT---------T 702
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
G+ ++A + KN +D+R M +A +L+ L A S +++IHG G G+
Sbjct: 703 RGNIEKKAHF-------KNEIDIREMSASDAEIRLEKYLDDAFLLGVSPVYIIHGRGKGI 755
Query: 719 VKERVLEILR--NHPRVAKYEQESPMNYGCTVAYI 751
++E+V +L+ N+ + +Y + G TV Y
Sbjct: 756 LREKVAHLLKNINYVKSYRYGETFEGGDGVTVVYF 790
>gi|160937675|ref|ZP_02085035.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
gi|158439320|gb|EDP17072.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
Length = 812
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 229/760 (30%), Positives = 359/760 (47%), Gaps = 91/760 (11%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDS 68
+ L L LT L +I CI + + D AS L +R K R L+S
Sbjct: 124 FDSLEPLFAGLEPLTPLNNEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNS 182
Query: 69 LLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+L + + A +IT R R C+ +K+ +K + G+ + S++G+T F+EP
Sbjct: 183 ILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMA 235
Query: 129 AVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 188
+ NN L E E A+L+ L+ + A E++ M+ + ++D FA+AG A+
Sbjct: 236 IIRLNNEMRELEIQEQKEIEAVLASLSNQAAPCTEELRMDMELLAQLDFIFAKAGLARHY 295
Query: 189 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 248
P+ + + + I+I+ +HPLL NP
Sbjct: 296 KCSAPVFNDKGY------IHIKDGRHPLL---------------NP-------------- 320
Query: 249 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
VPI++ + E ++++TGPNTGGKT S+KT+GL +LM ++GL++PA
Sbjct: 321 ------QAVVPINVWLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSE 374
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG A
Sbjct: 375 LAIFDQVFADIGDEQSIEQSLSTFSAHMTNIVRILNEADSRSLCLFDELGAGTDPTEGAA 434
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA +IL +L + + TTHY++L ENA EF++ETL+PTYR+L G G
Sbjct: 435 LAIAILSFLHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGK 494
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 488
SNA I++ +G II A+ + E + +L SL R +E + +
Sbjct: 495 SNAFAISQKLGLPGYIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIEKEQAEINAY 549
Query: 489 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
EI L + + + LD R + T++ Q+ L AK D ++ N+L +S
Sbjct: 550 KDEIASLKNRLTQKEERLDERKDKILKNATEEAQRILREAKETADQTIKQI-NKLAASSG 608
Query: 549 DEINSLIKESESAIAAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLA 603
+ KE E+ A + + + D+ +V S +P + G+ V V S+ K
Sbjct: 609 -----VGKELEAERARLRDQLKKTDEKLTVKPKGPSQPISPKKLKIGDGVKVLSMNLK-G 662
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG- 662
TV +P + VQ G +R V NIR + K+ + D S S G
Sbjct: 663 TVSTLPNARGDLYVQMGILRSLV---NIRDLELLNEKD-------ISATLGDGSSISYGG 712
Query: 663 -SSNEEASYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 714
++ + S +++ SK+S ++L GM V+EA ++ L A + V+HG
Sbjct: 713 KAARGKGSGSSQIKMSKSSTVSAEVNLIGMTVDEAVPAMEKYLDDAYLAHLQTVRVVHGR 772
Query: 715 GTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
GTG +K V + LR V ++ Q + G TV K
Sbjct: 773 GTGALKNAVHKRLRQLKYVKEFRLGQFGEGDSGVTVVTFK 812
>gi|345023410|ref|ZP_08787023.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
Length = 779
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 224/754 (29%), Positives = 371/754 (49%), Gaps = 106/754 (14%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA----ERKRNMENLDSL 69
P+L+ L+++ L +LE +I CID + +D A+E L IR+ R E L+S
Sbjct: 114 PILKGLVESITPLRDLELEIKSCIDDHGHV-MDSATEKLRGIRSSIRTHESRVREKLESY 172
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + + A +IT R R + +K ++ + GI + S+SG T FMEPK
Sbjct: 173 TRTKSNMLSDA------IITIRNDRYVIPVKHEYRGAI-GGIVHDQSASGQTLFMEPKAV 225
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN L E E IL L+ IA+ E + + + ID FARA + M
Sbjct: 226 VDLNNQLQELYAREKQEIERILRELSHRIAEDEGFLSENIRILASIDFIFARANLGRAMK 285
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ Q I ++ +HPL+ N E V +
Sbjct: 286 AARPAMNDQG------IIKMQQARHPLI-----------------------NIEDVVAN- 315
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
DI++ + +VITGPNTGGKT ++K +GL +LM+++GL +PA + +
Sbjct: 316 -----------DIEIGRDYTTIVITGPNTGGKTVTLKMVGLCTLMAQSGLQVPALDGCEM 364
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F+ + ADIGD QS+EQNLSTFS H++ IVDIL+ V +LVL DE+G+GTDP EG AL
Sbjct: 365 AVFEHVFADIGDEQSIEQNLSTFSSHMTNIVDILKHVDDRTLVLFDELGAGTDPQEGAAL 424
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL + R + TTHY +L NA+ EF ++TL+PTYR+L G G S
Sbjct: 425 AMAILDEVVSRRARVIATTHYPELKAYGYNREDVINASMEFDVQTLQPTYRLLIGVPGRS 484
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART---AA 486
NA +I+K +G D II RA+ V + + ++ + L +S ++ ++ E + +
Sbjct: 485 NAFDISKRLGLDEFIIDRAKSHV-GIDSKNVENMIAALEKSKVQAEKEYEEAHKILLESE 543
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
L E+ + ++ ED+ + L ++A K + ++E +I + D ++++
Sbjct: 544 ELRKEMEEEWQRFEDKREALYKKAEEKAEKAISKAREEAEIIVSEIRKMKTD--AKMKEH 601
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS---FTPQFGEQVHVKSLGDKLA 603
E L +++ +++ +P + S+ NT+S +P G+++ + ++ ++
Sbjct: 602 EWIEAKKLFDDAQPNLSS-----KPKE----SKRNTTSKEELSP--GDEIKLLTV-NQNG 649
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
TV+E + + LVQ G M+V+VK+N+++ I P KQ + +
Sbjct: 650 TVIEKVNEKE-YLVQVGIMKVKVKRNDLQLI--------GKP-----KQTFQKPLATVKG 695
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGV 718
SN LDLRG R E+A +L D LA + +F+IHG GTG
Sbjct: 696 SNYHVPL---------ELDLRGERFEDALLKLEKYVDDAVLAGYPK---VFIIHGKGTGA 743
Query: 719 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
+++ V + ++ HP +A Q + G V ++
Sbjct: 744 LRKGVQDFVKKHPSIASSRQGAAGEGGSGVTVLE 777
>gi|422844164|ref|ZP_16890874.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325685729|gb|EGD27807.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 787
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 229/729 (31%), Positives = 348/729 (47%), Gaps = 114/729 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGARLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 508
+ H EL + + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 509 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
K K+ ++ EL A+ +Q+ T NQL DA E N L K+
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ------- 623
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
EA+ + V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 624 --EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-YEVSLGRIKL 677
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+V +I + +++ A A+ R +++SLDLR
Sbjct: 678 KVTDRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLR 715
Query: 685 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 716 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 774
Query: 743 NYGCTVAYI 751
N G T A I
Sbjct: 775 NEGGTGATI 783
>gi|431546278|ref|ZP_19518903.1| MutS2 protein [Enterococcus faecium E1731]
gi|430591597|gb|ELB29626.1| MutS2 protein [Enterococcus faecium E1731]
Length = 786
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIQAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|377831881|ref|ZP_09814846.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
gi|377554259|gb|EHT15973.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
Length = 792
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 232/759 (30%), Positives = 351/759 (46%), Gaps = 147/759 (19%)
Query: 36 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----------AGGIDK 85
ID +LD AS L IR L+ K A+I Q A + +
Sbjct: 139 SIDQDTGAVLDEASSKLHGIR-----------QLIAKTEAEIRQQMEKYTHGKMAKYLSE 187
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R + + + + G+ + S+SG T ++EP V+ NN RL S+I
Sbjct: 188 PIITVRNERYVLPVLSRERSRF-GGVVHDQSASGQTLYIEPASTVDLNN---RLRQSQIE 243
Query: 146 EETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E + L+ L+ +A +I+ + +D A+A A P+LS V
Sbjct: 244 ERQEVRRVLAALSTMLAPYRLDIQNNAKILGHLDFVNAKAKMAHDTKATLPLLSQAGQVV 303
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ +P K+ V DI
Sbjct: 304 LKKA------RHPLI---------------DPKKA--------------------VANDI 322
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + +VITGPNTGGKT ++KTLGL LM ++G+++PA + +D I ADIGD
Sbjct: 323 KLGQDYHAIVITGPNTGGKTITLKTLGLIQLMGQSGMFIPAAEGSTIAVYDEIFADIGDE 382
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + IL+ + SLVL+DE+G+GTDP EG ALA +IL D++G
Sbjct: 383 QSLEQNLSTFSGHMENVKAILDQTTAHSLVLLDELGAGTDPKEGAALAMAIL----DKIG 438
Query: 383 L----AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
VVTTHY +L NA+ EF +TLRPTYR+L G G SN + IAK +
Sbjct: 439 ALGSDVVVTTHYPELKAFAYDRPETINASMEFDQKTLRPTYRLLLGIPGQSNGIAIAKRL 498
Query: 439 GFDRKIIQRAQ-----------KLVERLRPERQQHR-KSELYQSLMEERRKLESQARTAA 486
G + II AQ K++ L +R+Q R +SE + L+ + + E
Sbjct: 499 GIGQDIIAEAQSLVSDDSQDLNKMIGELVEQRKQARERSEKLEVLLTKNKATEQ------ 552
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRD 545
E+ D E++ + L A ++K QV Q AK + D ++ ++
Sbjct: 553 ----ELNDKLTRFEEQREKLYEDA---RSKANHQVSQ----AKKKADQIIHHLRQLEITQ 601
Query: 546 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
+ + N LI +++ A+ A+ + R + SV + G+ V VKS G + +
Sbjct: 602 GGSVKENELI-DAQGALNALHQNPRLKHN-SVLKKAKQKRDLHKGDAVLVKSYGQR-GEL 658
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+E G+ VQ G +R+ + +N++ I KQQ +N
Sbjct: 659 LEKRGNHKWE-VQLGILRMEIDENDLEKIS---------------KQQ---------LAN 693
Query: 666 EEASYGPR------VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMG 715
E + P+ VQT S LDLRG R E+A +L I A + S + VIHG G
Sbjct: 694 AEKEHEPKRRPVRTVQTRHTSARLDLRGHRYEQAMSELAQFIDHALLNNLSPVTVIHGKG 753
Query: 716 TGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
TG +++ E LR++PRV + +P G T+ Y++
Sbjct: 754 TGALRKGTWEYLRSNPRVKSFAYAAPNAGGDGATIVYLQ 792
>gi|421730736|ref|ZP_16169862.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407074890|gb|EKE47877.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 785
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 217/742 (29%), Positives = 357/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGNLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + SL E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHL---KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 557
+ +L+ + + ++ + + QI ++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAERKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|310640954|ref|YP_003945712.1| muts2 protein [Paenibacillus polymyxa SC2]
gi|309245904|gb|ADO55471.1| MutS2 protein [Paenibacillus polymyxa SC2]
Length = 733
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 210/657 (31%), Positives = 327/657 (49%), Gaps = 83/657 (12%)
Query: 10 FHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RN 62
H +P+ LL L+E LE I CID + LD AS +L IR E + R
Sbjct: 109 LHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSASTELSQIRRELRSGEVRI 167
Query: 63 MENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 121
E LDS+++ +++ Q LIT R R + +KA ++ GI + S SGAT
Sbjct: 168 REKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGAT 221
Query: 122 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 181
F+EP+ V NN E E IL LTA +A+ + Y +D + +D FA+
Sbjct: 222 LFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADMLLYDVDILGNLDFIFAK 281
Query: 182 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 241
A A+ M P+++ + ++ +HPL+ PL+
Sbjct: 282 ARLAREMKATLPLMNDRGYLKLKKG------RHPLI----------------PLEQ---- 315
Query: 242 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 301
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++
Sbjct: 316 ---------------VVPIDVELGNSYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV 360
Query: 302 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 361
P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+ ++ +SLVL+DE+G+GT
Sbjct: 361 PVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILKNMTPKSLVLLDEVGAGT 420
Query: 362 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 421
DP+EG ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+
Sbjct: 421 DPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGIINASMEFDVATLSPTYRL 480
Query: 422 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 481
L G G SNA IA+ +G +I+ A+ V + R + SL + R E +
Sbjct: 481 LVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRVEHMIASLEQNRLTAEQE 535
Query: 482 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 541
A L E+ L + E LD+ L+++ + +++ + A+V +D + E
Sbjct: 536 REKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEKAEDEARVLVDKARSEAEK 588
Query: 542 QLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVH 594
+ D A E + +KE + IAA E + T S T + G++V
Sbjct: 589 IITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTAKRSITTRTRSIMAGDEVS 647
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 651
V SL K VVE+ G + + VQ G M+++V +++ + + A APR++K
Sbjct: 648 VHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL-----QPAQTTAPRVQK 697
>gi|187935216|ref|YP_001886652.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B str. Eklund 17B]
gi|238691672|sp|B2TS45.1|MUTS2_CLOBB RecName: Full=MutS2 protein
gi|187723369|gb|ACD24590.1| MutS2 family protein [Clostridium botulinum B str. Eklund 17B]
Length = 785
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 190/662 (28%), Positives = 326/662 (49%), Gaps = 92/662 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L T R R + +KA +K +P G+ + SS+GAT F+EP G V NN L E AE
Sbjct: 186 LYTIRGDRYVIPVKAEYKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+LS L+ ++ + + + + +D F++ +A ++ + P+ V D
Sbjct: 245 IDRVLSALSLKVKMNAEHCESNLKILTNLDFIFSKGKYACELNAIKPM------VRDDGI 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
NI +HPL+ D VP+D+ +
Sbjct: 299 FNIMSGRHPLIE-----------------------------------KDKVVPLDVVLGD 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
E ++ITGPNTGGKT ++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+E
Sbjct: 324 EFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV+I+E +R+SL+L DE+G GTDP+EG ALA +I++ L + +
Sbjct: 384 QSLSTFSSHLTNIVNIMEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L R ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I
Sbjct: 444 TTHYSELKAYALNKDRVENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVID 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ + + E + L ++L E+ + AR A + E +L ++ E + + L
Sbjct: 504 CAKNYMSKENLEFEG-----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERL 558
Query: 507 D--RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
+ + A+++A+E + ++ + AK + D +++ +R+ I S ++
Sbjct: 559 EKVKDKAYMEARE--EAKKIVANAKDEADEILK----AMRELEKLGIGSGGRQRLEE--- 609
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVL 616
E + D E N GE + +LG ++ V+ +P + V
Sbjct: 610 --ERKKLKDSLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQ 667
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
V+ G M++ VK ++R + + + E + +V+
Sbjct: 668 VEAGIMKISVKLKDLR-------------------KTKQSKVEKVKKKRELKLHFSKVE- 707
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
N +DLRG+ EEA +++D L A + + ++HG GTG++++ + ++L+ H V
Sbjct: 708 --NRIDLRGLDAEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVK 765
Query: 735 KY 736
Y
Sbjct: 766 NY 767
>gi|154686993|ref|YP_001422154.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens FZB42]
gi|189030421|sp|A7Z7E7.1|MUTS2_BACA2 RecName: Full=MutS2 protein
gi|154352844|gb|ABS74923.1| MutSB [Bacillus amyloliquefaciens FZB42]
Length = 785
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/739 (28%), Positives = 363/739 (49%), Gaps = 94/739 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ M P+++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + S+ E L+++++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKDLQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKE 557
+ +L+ + + + Q+ ++L A + + ++++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPERKTE----KKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV-- 733
LDLRG R E A +++ L A + +IHG GTG +++ V ++L+NH V
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKS 766
Query: 734 AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 767 SRFGEAGEGGSGVTIVELK 785
>gi|407796063|ref|ZP_11143019.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407019417|gb|EKE32133.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 781
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 218/732 (29%), Positives = 362/732 (49%), Gaps = 97/732 (13%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+L EL+ + L LE I ID +++D AS+ L IR+ R + ++S
Sbjct: 115 PILRELVDIIHPLPILERTIRNSIDDNG-VVMDGASDTLRSIRSRINTLESRLRDKMESY 173
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
K+ + ++ A ++T R R + +K ++ + GI + SSSGAT F+EP+
Sbjct: 174 TKQQSEKLSDA------IVTIRNERYVLPVKQEYRGSIK-GIVHDQSSSGATLFIEPQPV 226
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLT--AEIAKSEREIKYLMDRVLE-IDLAFARAGFAQ 186
V+ NN L + + E+ + +L +E + +R I RVL +D FARA +
Sbjct: 227 VDINN---DLQEARVQEKREVDRILGELSEAIEEDRPILAENVRVLAGLDFIFARAKLGR 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
M P ++++ + + +HPL+ SE V
Sbjct: 284 SMGAAMPAMNNEGRILMKQA------RHPLI------------------------SEEEV 313
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP DI++ + ++ITGPNTGGKT ++K +GL +LM++AGL +PA +
Sbjct: 314 -----------VPNDIELGTDFTSIIITGPNTGGKTVTLKLVGLCTLMAQAGLQIPAMDG 362
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
L FD + ADIGD QS+EQ+LSTFS H++ IVDIL+ V +LVL DE+G+GTDP EG
Sbjct: 363 CELAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVDILDKVDDSTLVLFDELGAGTDPQEG 422
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA +IL + D+ + TTHY +L NA+ EF++ETL PTYR+L G
Sbjct: 423 AALAMAILDEVVDKDARVIATTHYPELKAYGYNRENVVNASVEFNIETLEPTYRLLIGVP 482
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA I++ +G +I A+ ER+ + + + SL E RR+ E+ A
Sbjct: 483 GRSNAFEISRRLGLREDVISAAK---ERVGVDSES--VESMIASLDEARREAEADYERAE 537
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
+ E ++Y E+ E K + + L K ++ +Q ++ A+ + +V + + Q++++
Sbjct: 538 EIRREAEEIYSELNSEWKRFEDQKEKLYKKAEEKAKQSVDKAREEAQGIVDELK-QMKNS 596
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
S + + I+ + A E + + ++N + Q G++V + +L ++ +V
Sbjct: 597 SELKEHEWIEARKMFDEAEPELTKKEKQPKNKQSNETKEL-QAGDEVKLLTL-NQQGVIV 654
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
E G +D VQ G M+V+ K+ ++ + K + AP
Sbjct: 655 E-KGRNDEYQVQVGSMKVKAKRKDLEFVKTKKPEREKQIAP------------------- 694
Query: 667 EASYGPRVQTS--KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
R +TS K LDLRG R E+A ++L+ L A + +IHG GTG +++
Sbjct: 695 -----VRGKTSHVKPELDLRGERYEDALNRLEKYLDDALLAGYPQVSIIHGKGTGALRQG 749
Query: 723 VLEILRNHPRVA 734
V + + H R++
Sbjct: 750 VQSLAKRHSRIS 761
>gi|257882656|ref|ZP_05662309.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|294622756|ref|ZP_06701711.1| MutS2 family protein [Enterococcus faecium U0317]
gi|416132269|ref|ZP_11597881.1| MutS2 family protein [Enterococcus faecium E4452]
gi|424795296|ref|ZP_18221164.1| MutS2 family protein [Enterococcus faecium S447]
gi|424855055|ref|ZP_18279381.1| MutS2 family protein [Enterococcus faecium R499]
gi|424950176|ref|ZP_18365348.1| MutS2 family protein [Enterococcus faecium R496]
gi|424957193|ref|ZP_18371933.1| MutS2 family protein [Enterococcus faecium R446]
gi|424960033|ref|ZP_18374581.1| MutS2 family protein [Enterococcus faecium P1986]
gi|424966350|ref|ZP_18380154.1| MutS2 family protein [Enterococcus faecium P1140]
gi|424994917|ref|ZP_18406830.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|424998362|ref|ZP_18410055.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|425001768|ref|ZP_18413255.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|425004274|ref|ZP_18415594.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|425012205|ref|ZP_18423037.1| MutS2 family protein [Enterococcus faecium E422]
gi|425018028|ref|ZP_18428507.1| MutS2 family protein [Enterococcus faecium C621]
gi|425032607|ref|ZP_18437636.1| MutS2 family protein [Enterococcus faecium 515]
gi|430827998|ref|ZP_19446128.1| MutS2 protein [Enterococcus faecium E0269]
gi|431746632|ref|ZP_19535457.1| MutS2 protein [Enterococcus faecium E2134]
gi|431767631|ref|ZP_19556078.1| MutS2 protein [Enterococcus faecium E1321]
gi|431775339|ref|ZP_19563612.1| MutS2 protein [Enterococcus faecium E2560]
gi|431780207|ref|ZP_19568392.1| MutS2 protein [Enterococcus faecium E4389]
gi|431781496|ref|ZP_19569643.1| MutS2 protein [Enterococcus faecium E6012]
gi|431786129|ref|ZP_19574145.1| MutS2 protein [Enterococcus faecium E6045]
gi|257818314|gb|EEV45642.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|291597807|gb|EFF28944.1| MutS2 family protein [Enterococcus faecium U0317]
gi|364093369|gb|EHM35646.1| MutS2 family protein [Enterococcus faecium E4452]
gi|402924563|gb|EJX44761.1| MutS2 family protein [Enterococcus faecium S447]
gi|402931801|gb|EJX51358.1| MutS2 family protein [Enterococcus faecium R499]
gi|402933643|gb|EJX53063.1| MutS2 family protein [Enterococcus faecium R496]
gi|402944145|gb|EJX62582.1| MutS2 family protein [Enterococcus faecium R446]
gi|402949000|gb|EJX67094.1| MutS2 family protein [Enterococcus faecium P1986]
gi|402956711|gb|EJX74151.1| MutS2 family protein [Enterococcus faecium P1140]
gi|402978799|gb|EJX94516.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|402983441|gb|EJX98841.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|402985390|gb|EJY00600.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|402990027|gb|EJY04923.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|402994063|gb|EJY08626.1| MutS2 family protein [Enterococcus faecium E422]
gi|403003183|gb|EJY17093.1| MutS2 family protein [Enterococcus faecium C621]
gi|403012545|gb|EJY25764.1| MutS2 family protein [Enterococcus faecium 515]
gi|430484079|gb|ELA61114.1| MutS2 protein [Enterococcus faecium E0269]
gi|430608534|gb|ELB45780.1| MutS2 protein [Enterococcus faecium E2134]
gi|430630584|gb|ELB66939.1| MutS2 protein [Enterococcus faecium E1321]
gi|430640686|gb|ELB76520.1| MutS2 protein [Enterococcus faecium E4389]
gi|430643055|gb|ELB78811.1| MutS2 protein [Enterococcus faecium E2560]
gi|430646202|gb|ELB81696.1| MutS2 protein [Enterococcus faecium E6045]
gi|430649441|gb|ELB84818.1| MutS2 protein [Enterococcus faecium E6012]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNTYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|406671086|ref|ZP_11078326.1| MutS2 family protein [Facklamia hominis CCUG 36813]
gi|405581180|gb|EKB55231.1| MutS2 family protein [Facklamia hominis CCUG 36813]
Length = 784
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/749 (28%), Positives = 358/749 (47%), Gaps = 87/749 (11%)
Query: 12 RYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLL 70
R P L + C L++++ +I + + +L AS +L IR ++ + + + L
Sbjct: 115 RIYPALSFWADQCTVLSQVQLRIDQTV-SEDGTVLSSASSELARIRRQQGQTENQIRTQL 173
Query: 71 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
++ +A + LIT R R + +KA + L I + S++G T ++EP+ +
Sbjct: 174 NQLLKS--KANILSDALITIRNDRYVLPVKADFRGQLAGNIH-DQSATGQTIYVEPQAVI 230
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
+ NN L + E AE +L ++ E+ +K + ++D A+A + + +
Sbjct: 231 DLNNRLSSLYSQEKAEIERLLYEISLELIPYLDALKGNQTVIGQLDFIQAKAEYGKELQA 290
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P S ++ V+ + +HPL+ +P
Sbjct: 291 TTPQFSKENQVALWQA------RHPLV---------------DP---------------- 313
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D V DI + RV++ITGPNTGGKT +KT+GL LM +AGL +P + +L
Sbjct: 314 ----DQVVANDILIGETYRVMLITGPNTGGKTIVLKTIGLIQLMGQAGLQVPCQEGSQLG 369
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
FD I ADIGD QS+EQNLSTFS H++ IV I+E + +SL+L DE+GSGTDP EG ALA
Sbjct: 370 VFDQIFADIGDEQSIEQNLSTFSSHMTNIVSIIESATYQSLILFDELGSGTDPQEGAALA 429
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+IL +LR + + TTHY +L K + NAA EF +++L PTY ++ G G SN
Sbjct: 430 MAILDHLRKIGAVILATTHYPELKVYGHKTPKTINAAMEFDVDSLSPTYHLMIGVPGRSN 489
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
AL I++ +G D I+ +A++ + + H +E+ L ERR+ ++ + A L
Sbjct: 490 ALEISRRLGLDPSILDQAKQGI-----SQDSHSLNEMVAKLERERREASTKNQQAQDLLD 544
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASAD 549
+ L ++ E + A L K +Q +++ + Q + ++Q+ + QL
Sbjct: 545 QSASLLADLRTEYDRYLHQKADLIEKAKRQANEKVAETQKQAEAILQEIRDLQLVQGQNH 604
Query: 550 EIN-SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
I S++ + +SA+ + +A + V + + + G+ V V + T+V +
Sbjct: 605 TIKESVLIDKKSALDHLKQAEDLRKN-KVLKKAKNQRRLKVGDDVEVLPYSQR-GTIVAI 662
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D + LVQ G +++ + +++ + RK N RQ+GS
Sbjct: 663 --DKEQYLVQMGILKMTFSEADLKLLTKVDRKEKINL---------HRQAGS-------- 703
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 726
K +LDLRG R + A +L L A + ++ +IHG GTG ++ V +
Sbjct: 704 -------KVKTTLDLRGERYDLAMKRLTQYLDQALLSNHPMVTIIHGKGTGALRSGVQKA 756
Query: 727 LRNHPRVAKYEQESPMNY---GCTVAYIK 752
L HP+V +E SP N G T Y K
Sbjct: 757 LEKHPQVDHFEY-SPANAGGNGSTQVYFK 784
>gi|425052198|ref|ZP_18455823.1| MutS2 family protein [Enterococcus faecium 506]
gi|403035239|gb|EJY46637.1| MutS2 family protein [Enterococcus faecium 506]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEKVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|306820562|ref|ZP_07454193.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551379|gb|EFM39339.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 785
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 212/738 (28%), Positives = 344/738 (46%), Gaps = 123/738 (16%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + +++ + L ++ A + ++T R R + +K+ +
Sbjct: 142 ISDDASTELRRIRRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSEN 201
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ P GI + SSSGAT F+EP V NN L E E IL LT+ + +
Sbjct: 202 RDQFP-GIVHDTSSSGATLFIEPMAIVNMNNHLSALKQEEYREVERILEFLTSMVGEFSN 260
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI Y + + E+D A+ + MD + P ++ +V F ++ +HPL+
Sbjct: 261 EIIYDCEMLEELDFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----- 309
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
K V +S + +G +VITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KTLGL +M + GL++P F+ I ADIGD QS+ Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLLCIMLQCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIM 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
V SLVL DE+G+GTDP EG LA SIL L+++ L TTHY++L +
Sbjct: 400 NEVDENSLVLFDELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE--- 458
NA+ EF + TL PTYR++ G G SNA I++ +G IIQRA+ + E ++ E
Sbjct: 460 TNASVEFDVNTLSPTYRLIIGIPGKSNAFEISQKLGLSTGIIQRARDSIHTESIKVEDVI 519
Query: 459 ----RQQHRKSELYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREI 499
+ ++ E Q L +E R KLE++ R A +I++ L E
Sbjct: 520 TKLDKIKNEYEEKKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEA 579
Query: 500 EDEAKDLDRRAAHL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 558
++EA ++++ L K+ + + + +++N K +I+T +D A + L+K +
Sbjct: 580 KNEADEINKVLNKLKKSSDYKNIDKKMNEIKGRINT--------YKDKYAKKKEELVKSN 631
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E +P ++ V +T + F + V S+ DK + V+VQ
Sbjct: 632 E----------KPIENVGVGDT---VYVNSFAQNAKVLSVDDK----------KNEVVVQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +++ +KK NI + + ++ + ++ K + Q +
Sbjct: 669 LGAIKMTLKKENI-SLEKKDKDTKSSKSGKIMK--------------------SKAQGAT 707
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
S+DLRGM +E A ++D I + L +IHG+GT V+K+ V L+ H + Y
Sbjct: 708 TSVDLRGMDLETALMEVDKYIDDSYLAGLEQLTIIHGVGTLVLKKGVQSYLKKHKHIKNY 767
Query: 737 E--QESPMNYGCTVAYIK 752
Q G T+ +K
Sbjct: 768 RDGQYGEGGMGVTIVTLK 785
>gi|424819498|ref|ZP_18244589.1| MutS2 family protein [Enterococcus faecium R501]
gi|402926153|gb|EJX46215.1| MutS2 family protein [Enterococcus faecium R501]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|296331594|ref|ZP_06874063.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675447|ref|YP_003867119.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151189|gb|EFG92069.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413691|gb|ADM38810.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 785
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 224/742 (30%), Positives = 364/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRIRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L RVL+ +D FA+A +A+ + PI++
Sbjct: 243 KEKQEIERILRVLTEQTAEHTEEL-FLDLRVLQTLDFIFAKARYAKAVKATKPIMNDNGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
V + +HPLL P V N
Sbjct: 302 VRLKKA------RHPLL----------------PPDQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGGDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PNHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KE 557
+ +L+ + + + QQ +++ A + + ++ + + + + + + LI K
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
E A+ ++ +P+ ++T F P G++V V + G K T++E G ++ V
Sbjct: 616 LEGAVPTFEKSKKPEK----TKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ I ++ P P+ K A G S
Sbjct: 668 QIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVS 707
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 708 LE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G TV +K
Sbjct: 764 VKSSRFGEAGEGGSGVTVVELK 785
>gi|293568794|ref|ZP_06680108.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430819495|ref|ZP_19438147.1| MutS2 protein [Enterococcus faecium E0045]
gi|430834320|ref|ZP_19452327.1| MutS2 protein [Enterococcus faecium E0679]
gi|431149562|ref|ZP_19499420.1| MutS2 protein [Enterococcus faecium E1620]
gi|431230237|ref|ZP_19502440.1| MutS2 protein [Enterococcus faecium E1622]
gi|431301457|ref|ZP_19507776.1| MutS2 protein [Enterococcus faecium E1626]
gi|431764575|ref|ZP_19553112.1| MutS2 protein [Enterococcus faecium E4215]
gi|291588511|gb|EFF20345.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430440567|gb|ELA50814.1| MutS2 protein [Enterococcus faecium E0045]
gi|430485551|gb|ELA62457.1| MutS2 protein [Enterococcus faecium E0679]
gi|430574223|gb|ELB13001.1| MutS2 protein [Enterococcus faecium E1622]
gi|430575451|gb|ELB14167.1| MutS2 protein [Enterococcus faecium E1620]
gi|430580647|gb|ELB19114.1| MutS2 protein [Enterococcus faecium E1626]
gi|430630715|gb|ELB67064.1| MutS2 protein [Enterococcus faecium E4215]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|261208743|ref|ZP_05923180.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565573|ref|ZP_06446020.1| MutS2 protein [Enterococcus faecium D344SRF]
gi|260077245|gb|EEW64965.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162655|gb|EFD10508.1| MutS2 protein [Enterococcus faecium D344SRF]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 351/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P+N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APVN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|148658104|ref|YP_001278309.1| MutS2 family protein [Roseiflexus sp. RS-1]
gi|148570214|gb|ABQ92359.1| MutS2 family protein [Roseiflexus sp. RS-1]
Length = 828
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 231/790 (29%), Positives = 364/790 (46%), Gaps = 134/790 (16%)
Query: 15 PLL-ELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
PLL E + L E+E+ + I D + +LD AS L +R+E + L L
Sbjct: 117 PLLHETAVDLPLLPEVEDAVARAIGEDGQ---VLDSASPKLARLRSEVRTAFNRLQEKLH 173
Query: 72 KVAAQIFQAGGI-DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
+ I G + +P+IT R R V +KA+H+ + G+ + S+SGAT ++EP V
Sbjct: 174 NL---IMTHGDVLQEPIITVRNGRYVVPVKATHRRAI-RGLVHDQSASGATLYIEPLTIV 229
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L +E AE IL+ L+A + I ++ + +DLAFA A +A M
Sbjct: 230 ELNNAWRELQLAEQAEVERILAELSALVGDHAGAITAGVEALATLDLAFAMAQYAAAMRC 289
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V P + + + + +HPLL +P K
Sbjct: 290 VMPEIVDPPLPPDEPLLLLTAARHPLL---------------DPQKV------------- 321
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPID+++ R+++ITGPNTGGKT ++KT GL +LM++AG+++PA RLP
Sbjct: 322 -------VPIDMRLGGRFRLLLITGPNTGGKTVALKTTGLLALMAQAGMHIPASQPSRLP 374
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILE-------------------------- 344
F I ADIGD QS+EQ+LSTFS H++ I+ IL
Sbjct: 375 VFAQIFADIGDEQSIEQSLSTFSSHMTNIIRILRALEDAPDVAPAETSVSGSTQTMPPDT 434
Query: 345 --LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
L +LVL+DE+G+GTDP EG ALA +I++ L + L V TTHYA+L
Sbjct: 435 QRLGRMPALVLLDELGAGTDPVEGAALARAIIERLLELGVLGVATTHYAELKAFAYATPG 494
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 462
ENA+ EF +ETL PTY++ G G SNAL IA +G +++RA+ + R+
Sbjct: 495 VENASVEFDVETLAPTYKLTIGLPGRSNALAIAARLGLAPDLVERARATM-----AREDV 549
Query: 463 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 522
+ +L + ER ++ + A + A D K DR AA L+A E Q+
Sbjct: 550 QVEDLLAGIHRERDAAAAELQRAMEVRA----------DAEKYRDRLAAELRAFEEQR-D 598
Query: 523 QELNFAKVQIDTVVQDFENQ---LRDAS---------ADEINSLIKESESAIAAIVEAHR 570
+ A+ I+ ++ N+ LRD S +E ++E+ +++ A V +
Sbjct: 599 EAWQAAREAIEAELRQVRNEVRRLRDESRSVAASRRWLEEAERRLQEARASLPA-VPPGK 657
Query: 571 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
P + + + P G+ V V+S+G ++ + +D T VQ G R++
Sbjct: 658 PAGHPAPAAEQVARLQP--GDVVRVRSVG-LTGEILSINEEDQTAEVQVGGFRMQADLAE 714
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY---GPRVQTSKN---SLDLR 684
+ +E R +G+ G +Y G + ++ LD+R
Sbjct: 715 L--------------------TREKRAAGNGGGQPARPAYESRGTSLPAPRDVSLELDMR 754
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R + +LD L A + +IHG GTG +++ V + L++H VA + S
Sbjct: 755 GWRAADVGERLDRYLNDAYLAGLPWVRIIHGKGTGALRQAVRDTLKDHKLVASFSSASAT 814
Query: 743 NYGCTVAYIK 752
G V ++
Sbjct: 815 EGGEGVTIVR 824
>gi|69245126|ref|ZP_00603250.1| MutS 2 protein [Enterococcus faecium DO]
gi|257879660|ref|ZP_05659313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257890326|ref|ZP_05669979.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260559678|ref|ZP_05831858.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|293560080|ref|ZP_06676584.1| MutS2 family protein [Enterococcus faecium E1162]
gi|294614397|ref|ZP_06694313.1| MutS2 family protein [Enterococcus faecium E1636]
gi|314938141|ref|ZP_07845446.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|314943818|ref|ZP_07850553.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|314949777|ref|ZP_07853087.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|314951185|ref|ZP_07854243.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|314994416|ref|ZP_07859700.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|314995612|ref|ZP_07860706.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|383329426|ref|YP_005355310.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|389869286|ref|YP_006376709.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|415898673|ref|ZP_11551403.1| MutS2 family protein [Enterococcus faecium E4453]
gi|424789896|ref|ZP_18216506.1| MutS2 family protein [Enterococcus faecium V689]
gi|424912749|ref|ZP_18336124.1| MutS2 family protein [Enterococcus faecium R497]
gi|424955437|ref|ZP_18370273.1| MutS2 family protein [Enterococcus faecium R494]
gi|424964246|ref|ZP_18378359.1| MutS2 family protein [Enterococcus faecium P1190]
gi|424970080|ref|ZP_18383617.1| MutS2 family protein [Enterococcus faecium P1139]
gi|424974783|ref|ZP_18387998.1| MutS2 family protein [Enterococcus faecium P1137]
gi|424978200|ref|ZP_18391145.1| MutS2 family protein [Enterococcus faecium P1123]
gi|424980291|ref|ZP_18393093.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|424983595|ref|ZP_18396176.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|424987917|ref|ZP_18400268.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|424991796|ref|ZP_18403927.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|425007017|ref|ZP_18418168.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|425016051|ref|ZP_18426638.1| MutS2 family protein [Enterococcus faecium E417]
gi|425021060|ref|ZP_18431339.1| MutS2 family protein [Enterococcus faecium C497]
gi|425024153|ref|ZP_18434239.1| MutS2 family protein [Enterococcus faecium C1904]
gi|425035142|ref|ZP_18439993.1| MutS2 family protein [Enterococcus faecium 514]
gi|425039209|ref|ZP_18443767.1| MutS2 family protein [Enterococcus faecium 513]
gi|425041479|ref|ZP_18445872.1| MutS2 family protein [Enterococcus faecium 511]
gi|425046563|ref|ZP_18450570.1| MutS2 family protein [Enterococcus faecium 510]
gi|425049153|ref|ZP_18453021.1| MutS2 family protein [Enterococcus faecium 509]
gi|425060412|ref|ZP_18463707.1| MutS2 family protein [Enterococcus faecium 503]
gi|430831133|ref|ZP_19449186.1| MutS2 protein [Enterococcus faecium E0333]
gi|430852078|ref|ZP_19469813.1| MutS2 protein [Enterococcus faecium E1258]
gi|431003613|ref|ZP_19488711.1| MutS2 protein [Enterococcus faecium E1578]
gi|431251925|ref|ZP_19503983.1| MutS2 protein [Enterococcus faecium E1623]
gi|431755260|ref|ZP_19543914.1| MutS2 protein [Enterococcus faecium E2883]
gi|431771238|ref|ZP_19559624.1| MutS2 protein [Enterococcus faecium E1644]
gi|431772678|ref|ZP_19561016.1| MutS2 protein [Enterococcus faecium E2369]
gi|68195969|gb|EAN10402.1| MutS 2 protein [Enterococcus faecium DO]
gi|257813888|gb|EEV42646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257826686|gb|EEV53312.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260074346|gb|EEW62668.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|291592705|gb|EFF24298.1| MutS2 family protein [Enterococcus faecium E1636]
gi|291605947|gb|EFF35377.1| MutS2 family protein [Enterococcus faecium E1162]
gi|313590200|gb|EFR69045.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|313591188|gb|EFR70033.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|313596664|gb|EFR75509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|313597542|gb|EFR76387.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|313642488|gb|EFS07068.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|313643850|gb|EFS08430.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|364089863|gb|EHM32509.1| MutS2 family protein [Enterococcus faecium E4453]
gi|378939120|gb|AFC64192.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|388534535|gb|AFK59727.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|402921430|gb|EJX41876.1| MutS2 family protein [Enterococcus faecium V689]
gi|402927678|gb|EJX47618.1| MutS2 family protein [Enterococcus faecium R497]
gi|402934061|gb|EJX53454.1| MutS2 family protein [Enterococcus faecium R494]
gi|402947097|gb|EJX65327.1| MutS2 family protein [Enterococcus faecium P1190]
gi|402955532|gb|EJX73054.1| MutS2 family protein [Enterococcus faecium P1137]
gi|402962705|gb|EJX79623.1| MutS2 family protein [Enterococcus faecium P1139]
gi|402962932|gb|EJX79835.1| MutS2 family protein [Enterococcus faecium P1123]
gi|402966828|gb|EJX83433.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|402971214|gb|EJX87503.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|402973400|gb|EJX89529.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|402975823|gb|EJX91752.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|402993517|gb|EJY08117.1| MutS2 family protein [Enterococcus faecium E417]
gi|402995904|gb|EJY10320.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|403007752|gb|EJY21300.1| MutS2 family protein [Enterococcus faecium C497]
gi|403007864|gb|EJY21411.1| MutS2 family protein [Enterococcus faecium C1904]
gi|403017153|gb|EJY29929.1| MutS2 family protein [Enterococcus faecium 513]
gi|403018752|gb|EJY31412.1| MutS2 family protein [Enterococcus faecium 514]
gi|403024013|gb|EJY36210.1| MutS2 family protein [Enterococcus faecium 510]
gi|403025767|gb|EJY37812.1| MutS2 family protein [Enterococcus faecium 511]
gi|403028786|gb|EJY40587.1| MutS2 family protein [Enterococcus faecium 509]
gi|403042608|gb|EJY53554.1| MutS2 family protein [Enterococcus faecium 503]
gi|430482004|gb|ELA59145.1| MutS2 protein [Enterococcus faecium E0333]
gi|430542660|gb|ELA82768.1| MutS2 protein [Enterococcus faecium E1258]
gi|430561702|gb|ELB00956.1| MutS2 protein [Enterococcus faecium E1578]
gi|430578351|gb|ELB16903.1| MutS2 protein [Enterococcus faecium E1623]
gi|430617260|gb|ELB54134.1| MutS2 protein [Enterococcus faecium E2883]
gi|430633763|gb|ELB69917.1| MutS2 protein [Enterococcus faecium E1644]
gi|430637757|gb|ELB73756.1| MutS2 protein [Enterococcus faecium E2369]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|431414518|ref|ZP_19512337.1| MutS2 protein [Enterococcus faecium E1630]
gi|431759732|ref|ZP_19548343.1| MutS2 protein [Enterococcus faecium E3346]
gi|430589251|gb|ELB27396.1| MutS2 protein [Enterococcus faecium E1630]
gi|430625913|gb|ELB62516.1| MutS2 protein [Enterococcus faecium E3346]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGVVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|430855305|ref|ZP_19473014.1| MutS2 protein [Enterococcus faecium E1392]
gi|430547311|gb|ELA87247.1| MutS2 protein [Enterococcus faecium E1392]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|293553120|ref|ZP_06673758.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430822931|ref|ZP_19441506.1| MutS2 protein [Enterococcus faecium E0120]
gi|430838514|ref|ZP_19456460.1| MutS2 protein [Enterococcus faecium E0688]
gi|430857731|ref|ZP_19475364.1| MutS2 protein [Enterococcus faecium E1552]
gi|430865610|ref|ZP_19481245.1| MutS2 protein [Enterococcus faecium E1574]
gi|431742713|ref|ZP_19531597.1| MutS2 protein [Enterococcus faecium E2071]
gi|291602711|gb|EFF32925.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430442860|gb|ELA52881.1| MutS2 protein [Enterococcus faecium E0120]
gi|430491756|gb|ELA68208.1| MutS2 protein [Enterococcus faecium E0688]
gi|430546941|gb|ELA86883.1| MutS2 protein [Enterococcus faecium E1552]
gi|430552957|gb|ELA92674.1| MutS2 protein [Enterococcus faecium E1574]
gi|430607682|gb|ELB44983.1| MutS2 protein [Enterococcus faecium E2071]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|431514071|ref|ZP_19516119.1| MutS2 protein [Enterococcus faecium E1634]
gi|430586327|gb|ELB24588.1| MutS2 protein [Enterococcus faecium E1634]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHALRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGTLRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|427396578|ref|ZP_18889337.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|431638661|ref|ZP_19523288.1| MutS2 protein [Enterococcus faecium E1904]
gi|447912185|ref|YP_007393597.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
gi|425723248|gb|EKU86139.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|430602140|gb|ELB39719.1| MutS2 protein [Enterococcus faecium E1904]
gi|445187894|gb|AGE29536.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
Length = 786
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|406580064|ref|ZP_11055285.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|406584557|ref|ZP_11059584.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|406590812|ref|ZP_11065162.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410936712|ref|ZP_11368575.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
gi|404454651|gb|EKA01563.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|404463909|gb|EKA09484.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|404468826|gb|EKA13702.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410734742|gb|EKQ76660.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
Length = 786
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KHEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKDHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|242039141|ref|XP_002466965.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
gi|241920819|gb|EER93963.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
Length = 831
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 317/637 (49%), Gaps = 84/637 (13%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L R + +R L L+ K+ + + I R C+ +
Sbjct: 201 DTASPELRRYRDQVQRLESRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTTDNSS 258
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSERE 164
+ DG+ L+ S SGA +EP A+ N+ E++ S + +A+ E +LS LT +I
Sbjct: 259 IF-DGLLLS-SGSGAGSMIEPIAAIPLND-ELQESRALVAKAELDVLSKLTDKILLDLDS 315
Query: 165 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK------- 213
I+ L+ +++D ARA ++ DG P L V+ + ++E I
Sbjct: 316 IQNLLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATCGSVEQISSAQLPKK 375
Query: 214 ----------HPLLLGS-------SLRSLSAASSN------------SNPLKSDVENSEM 244
HPLLL + R +++A++ + L SD+++ ++
Sbjct: 376 AWKLYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEDQLASDLDSMKL 435
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
V L K D PVP+D V ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A
Sbjct: 436 RVSQLEK---DQPVPVDFMVAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILAS 492
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P
Sbjct: 493 EPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPL 552
Query: 365 EGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
EG AL S+L+ D L + TTH+ +L LK + FENA EF E L+PT++ILW
Sbjct: 553 EGAALGMSLLESFADAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILW 612
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQKLV--------------ERLRPERQQHRKSELYQ 469
G G SNA+NIA+ +G I++ ++ L+ ER + E QQH
Sbjct: 613 GIPGRSNAINIAERLGLPLDIVESSRHLLGTAGAEINALIMDMERFKQEYQQH------- 665
Query: 470 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL--NF 527
++E + L Q++ LH + + I D +R A + ++ + + F
Sbjct: 666 --LQEAQYLLMQSK---ELHNNLELAQKNIVDHTSAQRKRKARVISEYAVMARSIIRKKF 720
Query: 528 AKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 585
++Q + + E + DA +D + + + SAI + D + ++ +
Sbjct: 721 QQLQESAIAERLKEEKAVNDAKSDTVKDHVLANTSAIG---KTQNIDTNLGMATNDDEGG 777
Query: 586 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
P+ G+ V+V L ++ ATVV++ D V VQ G M
Sbjct: 778 VPEVGDSVYVPKLKNE-ATVVKIDLSKDEVQVQAGMM 813
>gi|385816182|ref|YP_005852573.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126219|gb|ADY85549.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 787
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 346/738 (46%), Gaps = 132/738 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 518 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 555
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
K+ EA+ + V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ---------EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 734 AKYEQESPMNYGCTVAYI 751
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|153815454|ref|ZP_01968122.1| hypothetical protein RUMTOR_01689 [Ruminococcus torques ATCC 27756]
gi|145847096|gb|EDK24014.1| MutS2 family protein [Ruminococcus torques ATCC 27756]
Length = 791
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 218/725 (30%), Positives = 340/725 (46%), Gaps = 93/725 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---G 82
LT L +I CI I D S+D +R++ NL+ + + +
Sbjct: 128 LTPLSNEIERCI-----ISEDEISDDASSALKHIRRSINNLNDRVHTTLSGLVNGSLRTY 182
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ LIT R R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L
Sbjct: 183 LQDALITMRGDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQ 241
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+ E A+ EI+ + ++D FAR A M PIL+ +
Sbjct: 242 EQDEIRKILASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR-- 299
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
I I +HPLL + VPI +
Sbjct: 300 ----IRIREGRHPLLDQKKV-----------------------------------VPITV 320
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ E +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD
Sbjct: 321 SLGDEFSLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDE 380
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R
Sbjct: 381 QSIEQSLSTFSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNI 440
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPG 500
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II A+K R Q +L L RR +E + A+ E L R+ +
Sbjct: 501 YIIDDAKK-----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQK 555
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE-- 559
+ L+ + + + ++ L AK D +++F + + SA E+ KE E
Sbjct: 556 QEKLEEQRDRIIREANEKANAILREAKEVADETLRNFHKFGKENISAAEME---KERERL 612
Query: 560 ------SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
++ +A ++ ++P + S+ + GE V V S+ + T+ +P
Sbjct: 613 RKKIKDTSASASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARG 664
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
V VQ G +R +V +++ I + + AP+ + +R + S ++ S P
Sbjct: 665 NVTVQMGILRSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPE 715
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
+ +L G V+EA +LD L A + + V+HG GTG +++ + E LR
Sbjct: 716 I-------NLLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQK 768
Query: 732 RVAKY 736
V Y
Sbjct: 769 HVKSY 773
>gi|430835419|ref|ZP_19453409.1| MutS2 protein [Enterococcus faecium E0680]
gi|430489410|gb|ELA66024.1| MutS2 protein [Enterococcus faecium E0680]
Length = 786
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVRAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|257883965|ref|ZP_05663618.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257819803|gb|EEV46951.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 786
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMS 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|418036209|ref|ZP_12674639.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688558|gb|EHE88595.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 787
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 346/738 (46%), Gaps = 132/738 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLHLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKQQTSL------------DRAKQLEKKLQDALDIY 562
Query: 518 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 555
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
K+ EA+ + V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ---------EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 734 AKYEQESPMNYGCTVAYI 751
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|430847896|ref|ZP_19465729.1| MutS2 protein [Enterococcus faecium E1133]
gi|430849196|ref|ZP_19466977.1| MutS2 protein [Enterococcus faecium E1185]
gi|431748902|ref|ZP_19537654.1| MutS2 protein [Enterococcus faecium E2297]
gi|430536272|gb|ELA76648.1| MutS2 protein [Enterococcus faecium E1133]
gi|430538042|gb|ELA78341.1| MutS2 protein [Enterococcus faecium E1185]
gi|430612427|gb|ELB49467.1| MutS2 protein [Enterococcus faecium E2297]
Length = 786
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|319651779|ref|ZP_08005905.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
gi|317396598|gb|EFV77310.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
Length = 785
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 216/729 (29%), Positives = 346/729 (47%), Gaps = 109/729 (14%)
Query: 44 ILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD ASE L +R + R E L+S+++ +AQ + I IT R R + +
Sbjct: 146 VLDSASETLRSLRNQLRTKESRVRERLESMIRSTSAQKMLSDAI----ITIRNDRFVIPV 201
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ GI + SSSG T F+EP V+ NN + E E IL L+ + A
Sbjct: 202 KQEYRGHY-GGIIHDQSSSGQTLFIEPASIVQLNNELQGIRVKEQQEIERILIALSVQAA 260
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++ E++ +++ + EID FA+A +++ + P ++++ +S + +HPL+
Sbjct: 261 ENSSELETIVEVLGEIDFMFAKARYSKRIKASKPKINNEGIISLFKA------RHPLI-- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
P+ V N DIK+ E +VITGPNTG
Sbjct: 313 --------------PIDEVVAN-------------------DIKLGAEYSTIVITGPNTG 339
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM++AGL +PA + F + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 340 GKTVTLKTVGLCTLMAQAGLQIPALDGSETAVFGNVYADIGDEQSIEQSLSTFSSHMVNI 399
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDIL+ V SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 400 VDILDQVDFNSLVLFDELGAGTDPQEGAALAISILDEVYKRGARVIATTHYPELKAYGYN 459
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF +ETL PTY++L G G SNA I+K +G ++I+ A+ +
Sbjct: 460 REGVINASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLKDQVIETARSYI-----GA 514
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKE 517
++ + SL E RR+ E+ A L+++++ + + ++ A H KA E
Sbjct: 515 DTNQVENMIASLEESRRQAEADMEEANDFLKSAEKLHKDLQKQMAEFYEEKDAMHEKAAE 574
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------P 571
+ + + AK + + +++D + A+ +KE E ++EA + P
Sbjct: 575 --RAEDIVEKAKAEAEEIIRDLRKMRMEKHAE-----VKEHE-----LIEAKKRLSEAAP 622
Query: 572 DDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
+ ++ + F G++V V S G K + +V D+ VQ G ++++V +
Sbjct: 623 QMSSAKNKLKPKNNKHVFEAGDEVKVLSFGQKGHLLEKV--SDNEWQVQIGILKMKVAER 680
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
++ + +P P E + + + S LDLRG R E
Sbjct: 681 DLEYVK--------SPKP-----VETKPVATVKGKDFHVSL---------ELDLRGERYE 718
Query: 690 EA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK--YEQESPMN 743
A +D AL R + +IHG GTG +++ V E L+NH V K + +
Sbjct: 719 NALLRVEKYIDDALLAGYPR--VSIIHGKGTGALRQGVQEYLKNHRSVKKIRFGEAGEGG 776
Query: 744 YGCTVAYIK 752
G TV K
Sbjct: 777 TGVTVVEFK 785
>gi|430946889|ref|ZP_19485669.1| MutS2 protein [Enterococcus faecium E1576]
gi|430558286|gb|ELA97705.1| MutS2 protein [Enterococcus faecium E1576]
Length = 786
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKIFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|385799733|ref|YP_005836137.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
gi|309389097|gb|ADO76977.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
Length = 791
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 229/767 (29%), Positives = 359/767 (46%), Gaps = 116/767 (15%)
Query: 9 IFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN--- 65
I Y + +L + L +I C++ + + D AS L +RA+ + ++EN
Sbjct: 118 IEREYQKIYDLCSDLQTTPSLAREIDRCLN-EYNEVADEASNKLRSLRAQIE-SIENSIR 175
Query: 66 --LDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 122
LDS++K Q I Q ++T+R +R V +K + DGI S+SG T
Sbjct: 176 DKLDSIIKSKKYQDILQEN-----IVTRRENRYVVPVKQEKRNSF-DGIVHGQSASGLTL 229
Query: 123 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 182
FMEP V NN + E E IL +L+++IA+SE IK + + +D A A
Sbjct: 230 FMEPMAVVRLNNQLREVQAKENVEIQRILQMLSSKIAQSENIIKRNLMIISNLDSLAAAA 289
Query: 183 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 242
F+ +D C +Q V+ I ++ +HPLL
Sbjct: 290 KFS--LDFDC----NQPEVNESGIIELKKARHPLL------------------------- 318
Query: 243 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 302
+ PVPID+K+ + +VITGPNTGGKT ++KT+GL +LM++ GL++P
Sbjct: 319 -----------GEEPVPIDLKLGNDIATLVITGPNTGGKTVALKTVGLLTLMTQTGLHIP 367
Query: 303 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 362
A + + F+ I ADIGD QS+EQ+LSTFS H+ RI L +LVL+DE+G GTD
Sbjct: 368 AAANSTISIFNKIFADIGDEQSIEQSLSTFSSHMHRIRKFLAESDNSTLVLMDELGVGTD 427
Query: 363 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 422
P EG AL SIL+ L+++ + TTHY+ L ENA+ EF L+TL+PTY+++
Sbjct: 428 PEEGAALGISILEKLQEKKATTIATTHYSQLKSYAYGTEEVENASVEFDLDTLKPTYKLI 487
Query: 423 WGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEER 475
G G SNA IA +G +II RA+ L VE + E Q R YQ L E
Sbjct: 488 MGVPGGSNAFEIALRLGIPEEIIDRARSLLSEEEIKVEDIINELNQERNR--YQKLRHEM 545
Query: 476 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 535
++ + + +++ ++ +E R+ A ET++ AK I +
Sbjct: 546 EAYRNREKELKEKYEKMIKEQQQKHEEEIQAARKEAEAIVTETKKE------AKRIISNL 599
Query: 536 VQDFENQLR--DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 593
NQ D + N +KE ++ ++EA ++ +S S F + G+QV
Sbjct: 600 KGKNYNQRSEVDRAQTSANQDLKE----LSQVLEAENEKEEAKIS---ASKF--EVGDQV 650
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
V S+G K ++ + D +Q G M+V ++ +
Sbjct: 651 RVHSIGRK-GEIINIDQDKKEAKIQAGIMQVTASLADLVKV------------------- 690
Query: 654 EDRQSGSAGSSNEEASY-GPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSV 707
+ NEE RVQ S++ LDLRG R E A +++D L A +
Sbjct: 691 ------DIPTENEEKQLKNYRVQKSQHVSPKLDLRGERYEAAQYKVDKYLDDAFLAGLNE 744
Query: 708 LFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGCTVAYIK 752
+ ++HG GTG +++ V E+L +H + + ++ G T+ IK
Sbjct: 745 VEIVHGKGTGALRQAVEEVLEKSSHAKDYRLGRQKEGGMGVTIVKIK 791
>gi|390566333|ref|ZP_10246744.1| MutS2 protein [Nitrolancetus hollandicus Lb]
gi|390170419|emb|CCF86090.1| MutS2 protein [Nitrolancetus hollandicus Lb]
Length = 796
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 251/470 (53%), Gaps = 49/470 (10%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
R+ L E ++ L LE + + + I LD AS +L IR + K L L
Sbjct: 115 RHPGLAEFIEAIASLPALEADLARTVGPRGEI-LDTASAELAEIRRDLKSAHARLLDRLN 173
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ A AG + ++T R R + +KA H+ +P G+ S+SG T F+EP V+
Sbjct: 174 RMIASGEYAGALQDAIVTMREGRYVIPVKADHRGQVP-GVVHGTSASGVTLFIEPMNVVD 232
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN L +E E IL + +IA + ++ ++ V+ DLA A+A A +
Sbjct: 233 LNNRWRELQMAEEHEVERILRARSDQIASAAGDLGRSVEAVVAFDLALAKARLAFDLRAH 292
Query: 192 CPILSSQSHVSFDSS------INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
P L S H + ++S IN+ +HPLL +++
Sbjct: 293 EPGLVS-GHGNAETSGHARHRINLRQARHPLLDPATV----------------------- 328
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
VPID+++ RV+VITGPNTGGKT ++KT+GL ++M+++GL++PA +
Sbjct: 329 ------------VPIDVRLGETYRVLVITGPNTGGKTVALKTVGLLAMMAQSGLFIPAAD 376
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
L F I AD+GD QS+EQ+LSTFS H+ R++ +L R+SLVL+DE+G+GTDP E
Sbjct: 377 GSELSVFPAIYADVGDEQSIEQSLSTFSSHMRRVIAMLRSADRDSLVLLDELGAGTDPQE 436
Query: 366 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 425
G ALA +I++ L +R LA+VTTHY++L ENA+ EF +ETL PTYR+L G
Sbjct: 437 GSALARAIIEALLERGSLAIVTTHYSELKAFAYVTAGTENASVEFDVETLAPTYRLLTGI 496
Query: 426 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 475
G SNAL IA+ +G +I A++ L PE + R E+ + +R
Sbjct: 497 PGRSNALAIARRLGLPEPVIAEARRY---LTPESE--RVEEMLSEIQHQR 541
>gi|313124256|ref|YP_004034515.1| muts family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280819|gb|ADQ61538.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 787
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 228/726 (31%), Positives = 346/726 (47%), Gaps = 108/726 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGEYLSDQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGACLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 508
+ H EL + + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 509 -RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 567
K K+ ++ EL A+ + +Q NQL DA E N L K+ E
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKE---GMQAKTNQLMDAKG-EFNQLAKQ---------E 624
Query: 568 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
A+ + V + Q G++V V S G + TV + G+ D V G+++++V
Sbjct: 625 ANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKLKVT 680
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
+I + +++ A A+ R +++SLDLRG R
Sbjct: 681 DRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLRGQR 718
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
EEA LD S + +IHG+GTG +++ V + L+ + V Y +P N G
Sbjct: 719 YEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APANEG 777
Query: 746 CTVAYI 751
T A I
Sbjct: 778 GTGATI 783
>gi|366090394|ref|ZP_09456760.1| DNA mismatch repair protein [Lactobacillus acidipiscis KCTC 13900]
Length = 786
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 330/681 (48%), Gaps = 89/681 (13%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ + ++T R+ R + +KA ++ G + S+SG T F+EPK V NN RLS
Sbjct: 184 LSEAVVTIRQDRYVLPVKAEYRNSF-GGQVYDQSTSGQTLFIEPKQIVALNN---RLSQQ 239
Query: 143 EIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E A++ IL L+ IA EI+ + +DLA A+A +A+ + P L+
Sbjct: 240 EAAQKEEVRRILRELSELIAPYTSEIEANAQLLGHLDLANAKAAYAKDLGASEPFLTD-- 297
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D S+ HPLL +P K+ V+N
Sbjct: 298 ----DDSLYFRQAWHPLL---------------DPKKA-VKN------------------ 319
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
DI + + + ++ITGPNTGGKT ++KT+GL LM ++GL++PA R+ F I ADI
Sbjct: 320 -DIMLGKDFKTMLITGPNTGGKTITLKTIGLIQLMGQSGLFIPANEGSRICIFAEIFADI 378
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQNLSTFS H++ IVD L+ +S SLVL DE+GSGTDP EG ALA +IL +
Sbjct: 379 GDEQSIEQNLSTFSSHMTNIVDFLDQISPRSLVLFDELGSGTDPQEGAALAIAILDDVAA 438
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
+ V TTHY +L + NA+ EF TL+PTY++L G G SNAL+I++ +G
Sbjct: 439 KGSYVVATTHYPELKVYGYERPETVNASVEFDSSTLKPTYKLLIGIPGRSNALDISRRLG 498
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
+ II A +LV + + + L+++R E + E L+ ++
Sbjct: 499 LPQTIIDSATQLV-----SKDSQDLNNMIGDLVQKRHDAEEEKIQTHKYLVESEQLHSDL 553
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
E L+ + L K Q+ + + D ++ D QLR +N +KE +
Sbjct: 554 EKAYAALNDQRDKLLEKAKQKANDTVAETTKKADQIIADLR-QLRLNGG--LN--VKEDK 608
Query: 560 --SAIAAIVEAHRPDD--DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
+A + + H+P++ V + + V VK+ G K ++ G+ D
Sbjct: 609 LINAKGQLNKLHQPENLQKNKVLKRAKQKHDLHPNDDVLVKTYGQK-GVLLHKAGNHDWK 667
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
VQ G +++++ +N++ I S+ N N A R + S+G S
Sbjct: 668 -VQIGILKMKINENDLEKISVSEENNQDNKASVKR-------TASSGIS----------- 708
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
SLDLRG R EEA +D L A S + +IHG GTG +++ +++ L+N V
Sbjct: 709 ---TSLDLRGQRYEEALTNVDRYLDSAQLAGYSSVTLIHGKGTGSLRQGIIKYLKNSRSV 765
Query: 734 AKYEQESPM--NYGCTVAYIK 752
+E SP G T+ ++K
Sbjct: 766 KSFEYASPNAGGNGATIVHLK 786
>gi|379011153|ref|YP_005268965.1| MutS-like protein [Acetobacterium woodii DSM 1030]
gi|375301942|gb|AFA48076.1| MutS-like protein [Acetobacterium woodii DSM 1030]
Length = 789
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 333/715 (46%), Gaps = 92/715 (12%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L IR E + + + L + + + + ++T R +R + +K ++
Sbjct: 147 DNASRELSRIRREMQFKYKRISEKLNHMISSTSYDKMLQEKIVTIRNNRYVIPVKQEYRS 206
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+P GI L+ S+SGAT F+EP VE NN L E E IL L+ +A EI
Sbjct: 207 QVP-GIVLDKSASGATLFIEPIAVVELNNDIKILVAEEEQEIVRILKELSQNVADQRDEI 265
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
D ++++D FA+ + ++GV ++ VS I + KHPL+
Sbjct: 266 ICNYDILIDLDFQFAKGKYGLAINGV------KTDVSETGRIALLRAKHPLI-------- 311
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
P E V S DI E E +VITGPNTGGKT S+
Sbjct: 312 --------P-------DEQVVAS------------DIYFEEEIDTMVITGPNTGGKTVSL 344
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KT+GL +LM ++GL++P + + F I ADIGD QS+EQNLSTFS H++ IV+I+
Sbjct: 345 KTIGLLNLMVQSGLFIPVREGSKTRIFTNIFADIGDEQSIEQNLSTFSSHMTNIVEIMNK 404
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+SLVL DE+G+GTDP+EG ALA SIL L R ++ TTHY++L N
Sbjct: 405 ADHDSLVLFDELGAGTDPTEGAALAISILNALHLRHVTSISTTHYSELKEFALVTPGVVN 464
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF ++TLRPTYR+L G G SNA IA +G +I+ A++L++ + R
Sbjct: 465 ASVEFDIKTLRPTYRLLIGVPGKSNAFEIAVRLGLAETVIENAKELIKN-----EAIRFE 519
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE-------T 518
E + E+RR+ E++ L + +L R+++ E + D L AK
Sbjct: 520 ETLIKIDEKRRRTEAEHDAIIRLKRDTEELKRQMDREKERFDEEKQVLIAKAQEEAMEIV 579
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIAAIVEAHRPDDDFSV 577
++ ++E +I T+ + N ++D E I IKE E I
Sbjct: 580 KKTREETEAIYREIRTIQETTTNAVKDNKELEAIRKRIKEKEKNIY-------------- 625
Query: 578 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 637
QFG Q + G L DD ++ ++ +R + I+ IPN
Sbjct: 626 ----------QFGNQPK-EYQGQALEM------DDISIGMKVYINSLRREGEVIKLIPNE 668
Query: 638 KRKNAANPAPRLRKQQED--RQSGSAGSSNEEASYGP-RVQTSKNSLDLRGMRVEEASHQ 694
+ + +L+ D R A ++ +Y + LDLRG EE+
Sbjct: 669 NKAMVQSEMIKLKVAVGDLARSVALAKPQEKKVTYKKVERHVMETKLDLRGKNGEESLFL 728
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 747
+D I A + ++HG GTG +++ + E L+ +P + + + MN G +
Sbjct: 729 VDKMIGDAMLSGNKQIVIVHGKGTGRLRQIIHEYLKGNPLIEDF-RLGAMNEGGS 782
>gi|188590038|ref|YP_001921612.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum E3 str. Alaska E43]
gi|238689679|sp|B2V583.1|MUTS2_CLOBA RecName: Full=MutS2 protein
gi|188500319|gb|ACD53455.1| MutS2 family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 785
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 193/669 (28%), Positives = 323/669 (48%), Gaps = 106/669 (15%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L T R R + +KA +K +P G+ + SS+GAT F+EP G V NN L E AE
Sbjct: 186 LYTIRGDRYVIPVKAEYKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+LS L+ ++ + + + +D F++ +A ++ + P+ V D
Sbjct: 245 IDRVLSALSLKVKMNAEHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGI 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
NI +HPL+ D VP+D+ +
Sbjct: 299 FNIMSGRHPLIE-----------------------------------KDKVVPLDVVLGD 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
E ++ITGPNTGGKT ++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+E
Sbjct: 324 EFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV+I+E +R+SL+L DE+G GTDP+EG ALA +I++ L + +
Sbjct: 384 QSLSTFSSHLTNIVNIMEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L R ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I
Sbjct: 444 TTHYSELKAYALNKERVENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVID 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ + + E + L ++L E+ + AR A + E +L ++ E + + L
Sbjct: 504 CAKNYMSKENLEFEG-----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERL 558
Query: 507 D--RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE----- 559
+ + A++ A+E + +V + +++ ADEI ++E E
Sbjct: 559 EKVKDKAYMDAREEAK-------------KIVANAKDE-----ADEILKAMRELEKLGIG 600
Query: 560 SAIAAIVEAHRP--DDDFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVP 609
S +E R D E N GE + +LG ++ V+ +P
Sbjct: 601 SGGRQRLEEERKKLKDSLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMP 660
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
+ V V+ G M++ VK ++R + + + E
Sbjct: 661 DNRGEVQVEAGIMKISVKLKDLR-------------------KTKQSKVEKVKKKRELKL 701
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ +V+ N +DLRG+ EEA +++D L A + + ++HG GTG++++ + ++L
Sbjct: 702 HFSKVE---NRIDLRGLDAEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDML 758
Query: 728 RNHPRVAKY 736
+ H V Y
Sbjct: 759 KRHVHVKNY 767
>gi|423484112|ref|ZP_17460802.1| MutS2 protein [Bacillus cereus BAG6X1-2]
gi|401139138|gb|EJQ46701.1| MutS2 protein [Bacillus cereus BAG6X1-2]
Length = 786
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 222/729 (30%), Positives = 351/729 (48%), Gaps = 107/729 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI + LD AS+ L IR + R E L+S+ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLESMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQNLSTFSSHMVNIVDILERADFESLVLFDELGAGTDPQEGAALAISILDEVYNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD-LYREIE 500
++I RA+ + K E + +EE +K + R A H + + L+RE++
Sbjct: 502 DRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHRELQ 555
Query: 501 DEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIK 556
+ + DR LKA+ ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 556 RQIIEFNDDRDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLANVKDHELIE 612
Query: 557 ES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVP 609
E A +V+ + N + P+ G++V V + G K + +V
Sbjct: 613 AKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLKKVS 663
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
D VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 664 --DTEWNVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVS 708
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L
Sbjct: 709 L---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYL 759
Query: 728 RNHPRVAKY 736
+ H V Y
Sbjct: 760 KKHRGVKNY 768
>gi|83815784|ref|YP_444790.1| MutS2 family protein [Salinibacter ruber DSM 13855]
gi|83757178|gb|ABC45291.1| MutS2 family protein [Salinibacter ruber DSM 13855]
Length = 819
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 226/753 (30%), Positives = 357/753 (47%), Gaps = 79/753 (10%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L + + L +LEE I +D + I D AS +L +R + + E L + L K
Sbjct: 117 YPRLADAVARATPLPDLEETIASILD-EDASIRDDASPELRRLRQQIRSKEEELRTTLDK 175
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ G T R RM + ++AS K + +G + S+SG T ++EP +E
Sbjct: 176 ALRHAVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLEL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++E AE IL +T + I+ + + + DL A+A FA + V
Sbjct: 235 NNEVRELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVV 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P L+ + HV EG ++P+L R + + T G S
Sbjct: 295 PKLNDEGHVEI-----YEG-RNPVLQLHFERR---------------DAGDATDGRASGE 333
Query: 253 ISDFP----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 308
P VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H
Sbjct: 334 EEALPPREVVPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSS 393
Query: 309 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 368
P FD I+ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG A
Sbjct: 394 FPLFDQIVADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDEGAA 453
Query: 369 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 428
LA ++L+ L + + TTH+ L + EN + EF ETLRPT+R G G
Sbjct: 454 LAQAVLEQLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGS 513
Query: 429 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQ------QHRKSELYQSLMEERRKLESQA 482
S A IA+ +G ++ RA+ L + + + R EL L + R+ A
Sbjct: 514 SYAFEIARRMGLSGDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDARK-----A 568
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
R A + + E ++ +D R+ A +E +++ +E N A+++ +T+ + E Q
Sbjct: 569 REKAEAEQQRYEEKTEKLEKERDAFRQQA---LEEAERIVEEAN-ARIE-NTIREIKEAQ 623
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-----QFGEQVHVKS 597
+ E +++ ++ + A E P+ D + +E + +S G+QV V
Sbjct: 624 AESDATQEAREQLEDYKADLQARREEAAPEQDAAPAEADGASPAAAGGPINEGDQVVV-- 681
Query: 598 LGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
D +T VEV +D + G M +RV + + + P + E+
Sbjct: 682 --DDGSTAVEVQEIEDGEARLLMGSMHMRVSLDRLTRVGG----------PESAEPDEED 729
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIH 712
G+A + EAS S+D+RG RV+EA H LD A+A + + ++H
Sbjct: 730 TGGNAEMAALEAS---------PSIDVRGERVDEARRQVQHFLDDAVAA--NLDTVEILH 778
Query: 713 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
G GTG ++ + E+L P V + +++P+ G
Sbjct: 779 GKGTGALRNALHEMLSGRPDVTDH-RKAPIEEG 810
>gi|431374601|ref|ZP_19510289.1| MutS2 protein [Enterococcus faecium E1627]
gi|430583225|gb|ELB21614.1| MutS2 protein [Enterococcus faecium E1627]
Length = 786
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSEASSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|357237673|ref|ZP_09125014.1| MutS2 family protein [Streptococcus ictaluri 707-05]
gi|356753863|gb|EHI70966.1| MutS2 family protein [Streptococcus ictaluri 707-05]
Length = 778
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 219/721 (30%), Positives = 351/721 (48%), Gaps = 111/721 (15%)
Query: 48 ASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
AS LE IR E + + + L ++KK Q+ + + LI R R + +K ++
Sbjct: 147 ASPALEKIRRQIAEEEQASRQMLQDIVKK------QSDYLSEALIASRNGRSVLPVKNTY 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + G+ ++SSSG+T ++EP+ V+ N + +L E E IL L+ +
Sbjct: 201 RNKVA-GVVHDISSSGSTVYIEPRALVQMNEVITQLQADERHELVRILRALSDMLRPYSD 259
Query: 164 EIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
+++ +L+ L F RA + D I +S D S+++ ++HPLL +
Sbjct: 260 QLRNNAWLLGH-----LDFVRAKYYYMRDYKATI----PKISKDKSLHLLSVRHPLLTEA 310
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
VP D++ E V+VITGPNTGG
Sbjct: 311 -------------------------------------VPNDLQFSKELAVIVITGPNTGG 333
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT +KTLGLA LM+++GL + A R+ F+ I ADIGD QS+EQNLSTFS H++ IV
Sbjct: 334 KTIMLKTLGLAQLMAQSGLPILADKGSRVALFNEIYADIGDEQSIEQNLSTFSSHMTHIV 393
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
IL+ ++SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L +
Sbjct: 394 SILDQADQDSLVLFDELGAGTDPQEGASLAMAILEQLRLTSIKTMATTHYPELKAYGIET 453
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
ENA+ EF L+PTYR + G G SNA IA +G I++ AQ++ + +
Sbjct: 454 DFVENASMEFDSTRLKPTYRFMQGVPGRSNAFEIASRLGLAPHIVKEAQEMTD---TDSD 510
Query: 461 QHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+R E L +E R++LE S+ + + R + K L +H K KE +
Sbjct: 511 VNRIIEQLEAQTLESRKRLEH----IKSVEQDNLKFNRAV----KKLYNEFSHAKDKELE 562
Query: 520 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
+ QE A+ +D + + E +L D + + + +I E+++ + +V P+ + S
Sbjct: 563 KASQE---AQEIVDMALTESEAILEKLHDKAELKPHQII-EAKTELKKLV----PEPNLS 614
Query: 577 ---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
V + P+ G+ + V + G + V +V D Q G +++ +K++
Sbjct: 615 QNKVLKKAKKLRAPRVGDGILVTAYGQRGTLVKQV--KDKKWEAQVGLIKMTLKEDEFTL 672
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ S+ A +++ SAG GPR + LDLRG R EEA
Sbjct: 673 VKTSQEAQTAKKK----TVHVVKKATSAG--------GPRAR-----LDLRGKRYEEAMQ 715
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTV 748
+LD I A + S + ++HG+GTGV++E V + LR H +V + +P N GCT+
Sbjct: 716 ELDAFIDQALLNNMSQVDIVHGIGTGVIREAVTKYLRRHKQVKSFAY-APQNAGGSGCTI 774
Query: 749 A 749
A
Sbjct: 775 A 775
>gi|410459253|ref|ZP_11313005.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
gi|409930446|gb|EKN67445.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
Length = 785
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 224/753 (29%), Positives = 358/753 (47%), Gaps = 101/753 (13%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSL 69
P+L ++ LT+LE KI CID + +D AS+ L + +R+ R E L+++
Sbjct: 117 PILSSYIEQLTTLTDLERKIKNCIDDHGHV-MDGASDKLRSIRQTLRSAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I IT R R + +K ++ GI + S+SGAT F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----ITIRNDRFVIPVKQEYRSAY-GGIVHDQSASGATLFIEPQAV 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL LT +A+ + + + + EID FA+A F Q +
Sbjct: 231 VELNNTLQEARAKEKQEVERILHELTLFVAEDAESMLHNVKILTEIDFMFAKASFGQKIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
P ++ + + + +HPL+ D++
Sbjct: 291 ASMPKMNREGRIRLFKA------RHPLI--------------------DIKQV------- 317
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP DI + + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + +
Sbjct: 318 --------VPNDIILGEDYSAIVITGPNTGGKTVTLKTLGLLTLMAQAGLQIPALDGSEM 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V SLVL DE+G+GTDP EG AL
Sbjct: 370 TVFSSVFADIGDEQSIEQSLSTFSSHMTNIVEILKQVDANSLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A +IL + +R V TTHY +L + NA+ EF +ETL PTYR+L G G S
Sbjct: 430 AIAILDDVYNRGAKVVATTHYPELKAYGYNRSGVINASVEFDVETLSPTYRLLLGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G + +I+ A+ V ++ ++ + SL E +++ E + A +
Sbjct: 490 NAFEISKRLGLSQHVIENAKGYV-----SQETNKVENMIASLEESKKQAEEEWSEAEDIR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASA 548
+ L++E++ + + K + ++ + AK + +++D + A A
Sbjct: 545 KDAEHLHQELQKQIIAFYEERDKILEKAEEDAKEAIEKAKGDAEAIIRDLRKMKFNAAQA 604
Query: 549 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
+ + LI E+ + V + + + P G++V V SL D+ +VE
Sbjct: 605 VKEHELI-EARKRLEEAVPTLQKNKKIVQKQKAKQKLLP--GDEVKVVSL-DQRGHIVEQ 660
Query: 609 PGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ + VQ G ++++VK+ ++ RP P A P +R GS
Sbjct: 661 VSEGE-FQVQIGILKMKVKEKDLEYISRPTP-----VATKPLATIR-----------GSE 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVV 719
+ K LDLRG R E+A + D LA + S S +IHG GTG +
Sbjct: 704 HH----------VKPELDLRGERYEDAVLMVEKYIDDALLAGYPSVS---IIHGKGTGAL 750
Query: 720 KERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
++ V + L+NH V Y G + Y++
Sbjct: 751 RKGVHDFLKNHRHVKAYRLGGMAEGGSGMTYVE 783
>gi|375363272|ref|YP_005131311.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371569266|emb|CCF06116.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 785
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 216/742 (29%), Positives = 358/742 (48%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L +LE +I CID + LD AS L IR + + R + L+S+L+ +A
Sbjct: 129 LGDLEREINSCIDDHGEV-LDHASPALRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ +EI ++ + +D FA+A +A+ + P ++
Sbjct: 243 KEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAIKATKPFMNG---- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D I ++ +HPLL P V N D
Sbjct: 299 --DGFIRLKKARHPLL----------------PQDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M++AGL++PA FD + ADIGD
Sbjct: 322 IELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV+IL+ VS SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELY-QSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + +H + +L SL + +++ + + SL E L++E++
Sbjct: 502 EHIIGQAKSEM------TAEHNEVDLMIASLEKSKKRADEELSETESLRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHL---KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 557
+ +L+ + + ++ + + QI ++ + + R E+ K
Sbjct: 556 QQIIELNAQKDKMMEEAERKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A+ A ++ +P+ P G++V V + G K A ++E G+ + V
Sbjct: 616 LGDAMPAFEKSKQPER----KTEKKRELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ + ++ P P+ K A ++ + Y ++
Sbjct: 668 QIGILKMKVKEKDLEFLKSA-------PEPKKEK---------AITAVKGKDYHVSLE-- 709
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 710 ---LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G T+ +K
Sbjct: 764 VKSSRFGEAGEGGSGVTIVELK 785
>gi|228941731|ref|ZP_04104278.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974655|ref|ZP_04135221.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981249|ref|ZP_04141549.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|384188627|ref|YP_005574523.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676948|ref|YP_006929319.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|423386045|ref|ZP_17363301.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|423527598|ref|ZP_17504043.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|452201022|ref|YP_007481103.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|228778449|gb|EEM26716.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|228785058|gb|EEM33071.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817943|gb|EEM64021.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942336|gb|AEA18232.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401634696|gb|EJS52459.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|402452967|gb|EJV84777.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|409176077|gb|AFV20382.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452106415|gb|AGG03355.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 786
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 216/734 (29%), Positives = 353/734 (48%), Gaps = 94/734 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L ELE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYELEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQL- 602
Query: 550 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLAT 604
+N +K+ E A + +E P + + N + P+ G++V V + G K
Sbjct: 603 -VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVAKY 736
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKNY 768
>gi|346307521|ref|ZP_08849654.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
gi|345905454|gb|EGX75193.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
Length = 792
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 312/660 (47%), Gaps = 81/660 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L E
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + + +
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+HPLL + VPI + +
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADIGD QS+
Sbjct: 325 GDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L + +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504
Query: 446 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+ A+ L E Q +L L RR + + A+ E+ L +E + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 559
L+ + + + ++ L AK D +++F + + SA E+ L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618
Query: 560 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ E +P + S+ + GE V V S+ + TV +P ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G + +V +++ + + P K+ R S + S P +
Sbjct: 671 MGILSSKVHISDLEIV---------DEKPAYLKKTAARTSKGKVKMGKSLSVSPEI---- 717
Query: 679 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A + + V+HG GTG ++ + + L+ V Y
Sbjct: 718 ---NLLGKTVDEAVAELDKYLDDASLAHLTSVRVVHGKGTGALRAGIHQYLKRQKHVKSY 774
>gi|255281368|ref|ZP_05345923.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
14469]
gi|255268325|gb|EET61530.1| MutS2 family protein [Marvinbryantia formatexigens DSM 14469]
Length = 792
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 223/729 (30%), Positives = 349/729 (47%), Gaps = 101/729 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR-AERKRN---MENLDSLLKKVAAQIFQAG 81
LT L +I C+ + I D AS L IR A R+ N L+S++ A Q
Sbjct: 128 LTPLANEIRRCLPSEEEIS-DDASPALRSIRRAMRQMNDKVHAQLNSMVNGSAKAYLQ-- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
++T R R C+ +KA ++ + G+ + SS+G+T F+EP ++ NN L
Sbjct: 185 ---DAVVTMRNGRYCLPVKAEYRGQV-QGMIHDQSSTGSTLFIEPMAVIKLNNELRELEI 240
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ L+ + + ++ + + ++D FARA ++ DG P+L++
Sbjct: 241 KEEKEIEVILANLSGQAGVEQEALESNLTLLTKLDFIFARAQLSKSYDGSEPVLNNHG-- 298
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
INI+ +HPLL + TV VPID
Sbjct: 299 ----VINIKKGRHPLL------------------------DKKTV-----------VPID 319
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +++ITGPNTGGKT S+KT+GL +LM ++GL++PA + L FD + ADIGD
Sbjct: 320 IRLGQDFDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDDVFADIGD 379
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ IV IL+ + SLVL DE+G+GTDP+EG ALA ++L L +
Sbjct: 380 EQSIEQSLSTFSAHMTNIVSILKEANERSLVLFDELGAGTDPTEGAALAIAVLSNLHRQG 439
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY++L EN EF++ETLRPTYR+L G G SNA I+ +G
Sbjct: 440 IRTMATTHYSELKVFALSTPGVENGCCEFNVETLRPTYRLLIGIPGKSNAFAISAKLGLP 499
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYR 497
II+ A++ Q ++ E ++SL+ + R +E + EI L +
Sbjct: 500 EDIIEEARE---------QLSQQDEDFESLISDLETSRVTIEREREEINHYKEEIERLKQ 550
Query: 498 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA-DEINS 553
+E + + LD + + +Q L AK DT +++F Q D+ A ++ S
Sbjct: 551 RLEQKQETLDASRERILREANEQAHAILREAKEYADTTIKNFNKFGKQGIDSRAMEQERS 610
Query: 554 LIKESESAIA---AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
++E S++ AI P + + G+ V V S+ K TV +P
Sbjct: 611 RLREKMSSVEKNLAIKTQRAPAKTLQAKDLH-------LGDSVRVLSMNLK-GTVSTLPN 662
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG-SSNEEAS 669
+ VQ G +R +V NI+ + K + AP Q+GS ++ AS
Sbjct: 663 AKGDLFVQMGILRSQV---NIKDL--EKIADVETAAPY------KHQTGSGKIKMSKSAS 711
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
G + +L G +EA +LD L A + ++HG GTG +++ V L
Sbjct: 712 VGTEI-------NLLGKTTDEAIAELDKYLDDAYLSHMPSVRIVHGKGTGALRKAVHNYL 764
Query: 728 RNHPRVAKY 736
R V Y
Sbjct: 765 RRQKYVESY 773
>gi|116514507|ref|YP_813413.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116093822|gb|ABJ58975.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 787
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 229/729 (31%), Positives = 347/729 (47%), Gaps = 114/729 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 508
+ H EL + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 509 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
K K+ ++ EL A+ +Q+ T NQL DA E N L K+ E +A
Sbjct: 578 NEIVSKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ-EVNLAK 629
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 630 ----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKL 677
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+V +I + +++ A A+ R +++SLDLR
Sbjct: 678 KVTDRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLR 715
Query: 685 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 716 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 774
Query: 743 NYGCTVAYI 751
N G T A I
Sbjct: 775 NEGGTGATI 783
>gi|430843631|ref|ZP_19461530.1| MutS2 protein [Enterococcus faecium E1050]
gi|430497490|gb|ELA73527.1| MutS2 protein [Enterococcus faecium E1050]
Length = 786
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 215/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 513
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 514 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
K+ +V E +I ++ + Q+ + E + LI A +
Sbjct: 564 REKEMEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-HQLI----DAKTQLA 618
Query: 567 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEEILKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLR 714
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 743 NYGCTVAYI 751
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|218233457|ref|YP_002369349.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus B4264]
gi|228960821|ref|ZP_04122456.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048260|ref|ZP_04193828.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|229129836|ref|ZP_04258802.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|229147111|ref|ZP_04275470.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|229152748|ref|ZP_04280932.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|296505027|ref|YP_003666727.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|423584921|ref|ZP_17561008.1| MutS2 protein [Bacillus cereus VD045]
gi|423631267|ref|ZP_17607014.1| MutS2 protein [Bacillus cereus VD154]
gi|423657494|ref|ZP_17632793.1| MutS2 protein [Bacillus cereus VD200]
gi|226723046|sp|B7HF67.1|MUTS2_BACC4 RecName: Full=MutS2 protein
gi|218161414|gb|ACK61406.1| MutS2 family protein [Bacillus cereus B4264]
gi|228630726|gb|EEK87371.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|228636360|gb|EEK92831.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|228653527|gb|EEL09399.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|228722985|gb|EEL74362.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|228798843|gb|EEM45822.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296326079|gb|ADH09007.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|401235113|gb|EJR41586.1| MutS2 protein [Bacillus cereus VD045]
gi|401263840|gb|EJR69956.1| MutS2 protein [Bacillus cereus VD154]
gi|401289050|gb|EJR94771.1| MutS2 protein [Bacillus cereus VD200]
Length = 786
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 361/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423650449|ref|ZP_17626019.1| MutS2 protein [Bacillus cereus VD169]
gi|401281608|gb|EJR87514.1| MutS2 protein [Bacillus cereus VD169]
Length = 786
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 361/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|260584040|ref|ZP_05851788.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
gi|260158666|gb|EEW93734.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
Length = 785
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 234/772 (30%), Positives = 363/772 (47%), Gaps = 145/772 (18%)
Query: 16 LLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 73
L +L++ +L E+ +++ I D +LD AS L+ IR R + + L
Sbjct: 119 LPQLVEKLEYLPEISKQLQLSIREDG---YVLDDASIPLKGIRQGISRTEQEIKGQLDTY 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ A + LIT R R V +KA +K GI + S++G T FMEP+ V N
Sbjct: 176 VTGKY-AKYLTDSLITIRNDRYVVPVKAEYKSTF-GGIVHDQSATGQTLFMEPQAIVNLN 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAK------SEREIKYLMDRVLEIDLAFARAGFAQW 187
N +L + ++ E+ + +L K S + Y++ R +D+A A+A +A+
Sbjct: 234 N---KLRDYQLQEKKEVERILLELSEKLMPHTPSLTQNHYVLSR---LDIANAKALYAKQ 287
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ PI+ ++HV+ I +HPL+ +P KS V N
Sbjct: 288 IKANEPIIDEENHVA------IWQARHPLI---------------SP-KSVVAN------ 319
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
DI + E + +VITGPNTGGKT +KT+G+ LM++ GLY+PA
Sbjct: 320 -------------DIILGQEYQSIVITGPNTGGKTILLKTIGIIQLMAQMGLYIPALPDS 366
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
R+ F I ADIGD QS+EQNLSTFS H+S IV IL + +SLVL+DEIGSGTDP EG
Sbjct: 367 RVGVFTQIFADIGDEQSIEQNLSTFSSHMSNIVSILNKIDEKSLVLMDEIGSGTDPQEGA 426
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
+LA +IL Y+ + + TTHY +L NA+ EF +TL+PTYR L G G
Sbjct: 427 SLAIAILDYIGTKQSYVIATTHYPELKVYGYNRVGTINASMEFDSDTLQPTYRFLLGVPG 486
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLV--------------ERLRP---------ERQQHRK 464
SNA +I+ +G + +I++A++ + ER R ++Q
Sbjct: 487 RSNAFDISARLGLPKVVIEQARQFISVESQELNEMISDLERKRRIVDQEKSVIQQQLKES 546
Query: 465 SELYQSL-MEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQV 521
S+L ++L +E E++AR + +L + +++A+ + D RA LK+KET
Sbjct: 547 SQLLEALKLETENFKENKARLIEQAKEKANELVAQSQEDAEKILSDIRAMQLKSKETVVK 606
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 581
+ EL ++ T + D L+ + N ++K E
Sbjct: 607 EHEL----IEKKTALTD----LKHEQVLKKNKVLKR---------------------EKA 637
Query: 582 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 641
S P G+ V V S G + T+VE + + V VQ G +++++ ++ I +
Sbjct: 638 KKSLRP--GQSVEVTSFGQR-GTLVEKISEQEWV-VQMGIIKMKLPVEDLISI----EEE 689
Query: 642 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 699
+ P + K S+ S E LDLRG R EEA L++ L
Sbjct: 690 PSKPTQVIVKSHR-----SSHVSTE--------------LDLRGKRYEEAIKDLELFLDA 730
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
A + +IHG GTG +++ V + L+ H VA YE +PMN G A +
Sbjct: 731 ALLAGYPRVTIIHGRGTGAIQQGVHKTLKKHRSVASYE-FAPMNMGGNGATV 781
>gi|423335900|ref|ZP_17313651.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
gi|337729103|emb|CCC04226.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
Length = 791
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 200/678 (29%), Positives = 330/678 (48%), Gaps = 88/678 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 146 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPRRV--------------------VTNDI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + ILE ++ S+VL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSIVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G +
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGINP 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDDSQDLNNMIGDLVEQRKKAREESERLAKLVAKNEKVQRDLDEK 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--S 560
+ + L + + +++ AK + D ++ + LR + + +KE+E
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRII----HHLRQLEVQQGGN-VKENELID 611
Query: 561 AIAAIVEAHRPDDDF---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A + HR + SV + G+ V VKS G + ++ G+ V
Sbjct: 612 AQGQLNALHRDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-V 669
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++ + +NN+ + A PR + + ++ + QT
Sbjct: 670 QIGILKMEIDENNLEKV-------AKKDLPREKDARRRPRAAVRTT-----------QTR 711
Query: 678 KNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PRV
Sbjct: 712 KTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPRV 771
Query: 734 AKYEQESPMNYGCTVAYI 751
+ SP N G A I
Sbjct: 772 KSFSYASP-NAGGDGATI 788
>gi|227544199|ref|ZP_03974248.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|338204121|ref|YP_004650266.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
gi|227185835|gb|EEI65906.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|336449361|gb|AEI57976.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
Length = 791
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 327/679 (48%), Gaps = 90/679 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 146 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E +L L+ IA +I + +D A+A +A P+L+ ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLNKENHVS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPQRV--------------------VTNDI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGISP 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++I A+ V + + L+E+R+K ++ A L A+ + R+++ +
Sbjct: 502 QVIDEARTFV-----SDNSQDLNNMIGDLVEQRKKAREESEKLAKLVAKNEKVQRDLDKK 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESA 561
+ + L + + +++ AK + D ++ +++ + N LI +++
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRIIHHLRQLEVQQGGNVKENELI-DAQGQ 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ A+ + SV + G+ V VKS G + ++ G+ VQ G
Sbjct: 616 LNALHHDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-VQIGI 673
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR-----VQT 676
+++ + +NN+ + A PR ++A PR QT
Sbjct: 674 LKMEIDENNLEKV-------AKKDLPR----------------EKDAKRRPRAAVRTTQT 710
Query: 677 SKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PR
Sbjct: 711 RKTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPR 770
Query: 733 VAKYEQESPMNYGCTVAYI 751
V + SP N G A I
Sbjct: 771 VKSFSYASP-NAGGDGATI 788
>gi|295425851|ref|ZP_06818531.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
gi|295064454|gb|EFG55382.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
Length = 785
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 220/733 (30%), Positives = 352/733 (48%), Gaps = 117/733 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + + N E + K + + G K L +T R R + +
Sbjct: 146 VLDTASTALARLRHDMRSNEEEI-----KAKMEGYTKGNSSKYLSEGIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFVEPEAVLNLNNRQQNLVAQERQEIHRILKSLS-NLA 258
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
++E + + + + E+D A+A A+ M P LS D S+N+ +HPL+
Sbjct: 259 RTEIDRLNAIASALTELDFLQAKAKLAKQMKASQPKLSK------DHSLNLLKARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDKFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ + F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSTVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV I++ V+ ++LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVYIMKHVNADTLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G ++Q AQ L+
Sbjct: 458 NRERTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVQNAQGLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEI-MDLYREIEDEAKD-LDRRAAHLKAK 516
+ S+ + M ER +++A TAA + +D +++E++ ++ LD
Sbjct: 512 ----KDSDSDINKMIERLNEQTKAATAARNRLQTSLDRSQKLEEKLQEALDWY------- 560
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA--AIVEAHRPDDD 574
Q+VQ++L+FA+ + + VV R AD+I ++ S I I++A +
Sbjct: 561 -NQRVQKQLDFAQERANEVVAK-----RRKKADQIIKQLENSRQHIKENEIIDAKGQLNK 614
Query: 575 FSVSETNTSSFTP--QFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMR 623
E N + Q ++ H ++GDK+ + G T+ VQ G ++
Sbjct: 615 LEQQEANNLAHNKVLQHEKRRHHVNVGDKVKVLSY--GQTGTITKKLSAHEYEVQIGIIK 672
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+V +I + K P ++R SG+ +N + + LDL
Sbjct: 673 TKVSDRDIEKVTGEK----TTPKKQVRA-----TSGTLRRNN-----------AHSELDL 712
Query: 684 RGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQE 739
RG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 713 RGQRYDEAMTNLDRYIDSVLLAGLDYVTIIHGIGTGAIRKGVWQYLRSSNHVKSFNYAPA 772
Query: 740 SPMNYGCTVAYIK 752
+ G T+ ++K
Sbjct: 773 NEGGNGATIVHLK 785
>gi|423670115|ref|ZP_17645144.1| MutS2 protein [Bacillus cereus VDM034]
gi|401297475|gb|EJS03084.1| MutS2 protein [Bacillus cereus VDM034]
Length = 786
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 224/740 (30%), Positives = 356/740 (48%), Gaps = 106/740 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + D ++Q+ QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEADGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LINVKDHELIEAKSRLEGAAPELVKKQK---------INVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S + S LDLRG R E+A +++ L A S + +IHG GT
Sbjct: 698 ASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKTY 768
>gi|154499931|ref|ZP_02037969.1| hypothetical protein BACCAP_03588 [Bacteroides capillosus ATCC
29799]
gi|150271529|gb|EDM98786.1| MutS2 family protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 791
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 210/705 (29%), Positives = 340/705 (48%), Gaps = 74/705 (10%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR + + +L+K+ + QA + +P+IT R R V +++
Sbjct: 146 IADSASPELASIRRHIRATSAKVRDILQKLISS-SQAKYLQEPIITMRSDRYVVPVRSEC 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VSSSG T+F+EP G V+ NN L E E IL+ L+A+ A +
Sbjct: 205 KNDVP-GLVHDVSSSGGTFFIEPMGVVKANNELRELQADEEKEIDRILAELSADCAAHKE 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I D ++ +D+ FARA + M P + S+ I + +HPLL
Sbjct: 264 DIAQDYDLLIMLDVIFARAKLSYRMRASEPKIVSRG-------ICLRQARHPLL------ 310
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K+ V D+ + + +VITGPNTGGKT
Sbjct: 311 ---------DPNKA--------------------VANDLYLGGDFDTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++ GL++P + + FD +L+DIGD QS+ Q+LSTFS H+ IV IL
Sbjct: 342 TLKTIGLLTLMAQCGLHIPVADDSTVMIFDRVLSDIGDEQSIAQSLSTFSSHMVNIVGIL 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ ++L+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L
Sbjct: 402 KEADDKTLILFDELGAGTDPIEGAALAAAIIEQSRELGALVAATTHYAELKVYAMTTAGV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF + +L PTYR+L G G SNA I++ +G +++I +A R + + R
Sbjct: 462 ENASCEFDVNSLAPTYRLLIGIPGKSNAFAISERLGLPKEVIDKASA-----RIDAENVR 516
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
++ L ++R+++E + A L E+ D R + L++ A K + +
Sbjct: 517 FEDVITRLEQQRQQMEQEKDQARKLRREMEDSARTAREYRDKLEKERAKAVEKAQAEARA 576
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNT 582
L+ A+ D+V ++ R +E + E + + + +A
Sbjct: 577 ILDEARNTADSVFKELNEMRRRQRKEEDWQKVNEERAGLRQRLNQAEDALGARPEEPAPP 636
Query: 583 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 642
+ Q G+ V + +G A V+ V D ++ +Q G +++ K++ +R K
Sbjct: 637 PTRPAQAGDTVELVKMGGTKAQVLAV-NKDGSLQLQAGILKITAKQDEVRVTEEDGSKKQ 695
Query: 643 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 700
A R+ + E RQ + G+S+E +DLRGM +EA LD L A
Sbjct: 696 AQ---RIIHRAE-RQLRTVGASSE--------------VDLRGMMTDEAVAALDSFLDNA 737
Query: 701 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
+ +IHG GTG V++ V E L+ V + P YG
Sbjct: 738 MLAKLETVTIIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 779
>gi|166030474|ref|ZP_02233303.1| hypothetical protein DORFOR_00135 [Dorea formicigenerans ATCC
27755]
gi|166029726|gb|EDR48483.1| MutS2 family protein [Dorea formicigenerans ATCC 27755]
Length = 792
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 312/660 (47%), Gaps = 81/660 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L E
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + + +
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+HPLL + VPI + +
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADIGD QS+
Sbjct: 325 EDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L + +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504
Query: 446 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+ A+ L E Q +L L RR + + A+ E+ L +E + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 559
L+ + + + ++ L AK D +++F + + SA E+ L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618
Query: 560 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ E +P + S+ + GE V V S+ + TV +P ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G + +V +++ + + P K+ R S + S P +
Sbjct: 671 MGILSSKVHISDLEIV---------DEKPAYLKKTAARTSKGKVKMGKSLSVSPEI---- 717
Query: 679 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A + + V+HG GTG ++ + + L+ V Y
Sbjct: 718 ---NLLGKTVDEAVAELDKYLDDASLAHLTSVRVVHGKGTGALRAGIHQYLKRQKHVKSY 774
>gi|423598156|ref|ZP_17574156.1| MutS2 protein [Bacillus cereus VD078]
gi|401237617|gb|EJR44068.1| MutS2 protein [Bacillus cereus VD078]
Length = 786
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 221/739 (29%), Positives = 354/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A I ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIILSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSNRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|145351670|ref|XP_001420191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580424|gb|ABO98484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 502
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 234/429 (54%), Gaps = 45/429 (10%)
Query: 28 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 87
E+ E I C+ +LD ASE L IR E++R E L ++L + ++ + ++
Sbjct: 6 EVVEAIERCVSVPGGEVLDAASETLRAIRVEQRRIREELRTMLNATSKEMARKNFAERAQ 65
Query: 88 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 147
I R R C+ +K LP G+ L+VS +G T F EP+ AV NN LS SE AE
Sbjct: 66 IVTRLGRQCIPMKLGSAGELP-GVVLDVSGTGNTVFKEPQIAVPLNNALATLSASEDAEI 124
Query: 148 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL LT+ I ++ ++ + L E+D+A ARA A+W DG P + V +
Sbjct: 125 ERILVELTS-IVQTHADVLLDANEALTELDVANARARHAEWFDGAEPTI-----VDANQG 178
Query: 207 INIEGIKHPLL----LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ + ++HPL G+ +R D VPID
Sbjct: 179 MCVRELQHPLFRHWRRGTDVR-------------------------------DVVVPIDF 207
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
V+ + V ITGPNTGGKTAS+K +G+A LM++AGLYLP ++ +P+F ++AD+GD
Sbjct: 208 NVDSSIKCVTITGPNTGGKTASLKAIGVACLMARAGLYLPCESGCEIPFFRHVIADLGDS 267
Query: 323 QSLEQN--LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
Q+LE + LSTF H+ + IL+ + ++LVL+DE GSGTDP+EG +LA ++L L
Sbjct: 268 QTLELDGGLSTFGAHLKGLQRILDAATDDTLVLLDEPGSGTDPAEGASLAVAVLNKLSRT 327
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
L + T+HY ++ + AA EF L++L+PTYR+LWG TG SNAL+IA +G
Sbjct: 328 SRLTIATSHYEEVKEATLASDTAQVAAVEFDLQSLQPTYRLLWGETGKSNALHIAAGLGL 387
Query: 441 DRKIIQRAQ 449
+ I+ A+
Sbjct: 388 EPWILAEAR 396
>gi|217962033|ref|YP_002340603.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH187]
gi|222098016|ref|YP_002532073.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus Q1]
gi|229141279|ref|ZP_04269817.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|375286547|ref|YP_005106986.1| MutS2 family protein [Bacillus cereus NC7401]
gi|423355034|ref|ZP_17332659.1| MutS2 protein [Bacillus cereus IS075]
gi|423570780|ref|ZP_17547025.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|423603770|ref|ZP_17579663.1| MutS2 protein [Bacillus cereus VD102]
gi|226723047|sp|B7HRJ3.1|MUTS2_BACC7 RecName: Full=MutS2 protein
gi|254766387|sp|B9J054.1|MUTS2_BACCQ RecName: Full=MutS2 protein
gi|217064711|gb|ACJ78961.1| MutS2 family protein [Bacillus cereus AH187]
gi|221242074|gb|ACM14784.1| DNA mismatch repair protein, MutS family [Bacillus cereus Q1]
gi|228642060|gb|EEK98353.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|358355074|dbj|BAL20246.1| MutS2 family protein [Bacillus cereus NC7401]
gi|401085211|gb|EJP93454.1| MutS2 protein [Bacillus cereus IS075]
gi|401203407|gb|EJR10246.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|401246534|gb|EJR52881.1| MutS2 protein [Bacillus cereus VD102]
Length = 786
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 352/744 (47%), Gaps = 103/744 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 185 -LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I++A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + + + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVA--KYEQESPMNYGCTVAYIK 752
V +Y G TV +K
Sbjct: 763 RGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423417539|ref|ZP_17394628.1| MutS2 protein [Bacillus cereus BAG3X2-1]
gi|401107818|gb|EJQ15763.1| MutS2 protein [Bacillus cereus BAG3X2-1]
Length = 786
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 212/726 (29%), Positives = 346/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLINVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|365924477|ref|ZP_09447240.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265357|ref|ZP_14767919.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394428189|gb|EJF00772.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 335/689 (48%), Gaps = 113/689 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R + +K ++ G+ + S+SG T F+EPK VE NN + ++E E
Sbjct: 188 VITIRNDRYVIPVKQEYRSHF-GGVVHDQSASGQTVFVEPKQIVELNNRLKQQQSNEKEE 246
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ IA EI+ + + D A+A +A + P+LS+++ V
Sbjct: 247 VARILRELSQLIAPYTTEIRQNVYLLGVFDFVNAKAQYAAQIKATEPLLSTENKVY---- 302
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+ + HPLL +K+ V N DI +
Sbjct: 303 --LRQVWHPLL----------------DMKAAVRN-------------------DIMLGD 325
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ R +V+TGPNTGGKT ++KTLGL LM +AGL++PA R+ FD I ADIGD QS+E
Sbjct: 326 DYRAIVVTGPNTGGKTITLKTLGLVQLMGQAGLFIPAFEESRIGIFDNIFADIGDEQSIE 385
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL + +SL+L DE+G+GTDP EG ALA SIL Y+ + +
Sbjct: 386 QSLSTFSSHMTNIVSILSEIDDKSLILFDELGAGTDPQEGAALAISILDYVGSKSSYVMA 445
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY +L + + NA+ EF +E+L+PTY +L G G SNAL+I+K +G D II
Sbjct: 446 TTHYPELKAYGYERPQTINASMEFDIESLKPTYHLLLGIPGRSNALDISKKLGLDDVIIM 505
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREI 499
+A++L Q +++ Q L+ +R ++E ++ + LH ++ Y E
Sbjct: 506 QAKQLT-----AGQNQDLNDMIQDLVAKRHQVEEESIELHKNLEESRKLHDDLGKKYDEF 560
Query: 500 EDEAKDL---DRRAAH----LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA---- 548
++ ++L RR + AK+++++ EL ++ T ++ E++L A A
Sbjct: 561 VNQRENLLDNARRKGNEIVEQAAKKSEKIIAELRKMRLNAGTTIK--EDKLISAKARLNA 618
Query: 549 -DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 607
++ +L K A + +PDDD V VKS G + ++
Sbjct: 619 LEQPTNLKKNRVLRRAKEKQILKPDDD------------------VLVKSYGQR-GVLLR 659
Query: 608 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 667
G+ + VQ G ++++V + ++ + + K A +R S S+N
Sbjct: 660 KAGNHEWE-VQLGILKMKVAEGDLEKVKVEENKRTA-----IRT--------SVKSAN-A 704
Query: 668 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLE 725
P +LDLRG R EEA ++D L A S + ++HG GTG +++ + +
Sbjct: 705 THVSP-------TLDLRGERYEEALVKVDRYLDAAVLAGYSTVTIVHGKGTGALRQGITD 757
Query: 726 ILRNHPRVAKYEQESPM--NYGCTVAYIK 752
L V ++ +P G TV Y K
Sbjct: 758 FLSQSRAVKSFKFAAPNAGGNGATVVYFK 786
>gi|194468338|ref|ZP_03074324.1| MutS2 family protein [Lactobacillus reuteri 100-23]
gi|194453191|gb|EDX42089.1| MutS2 family protein [Lactobacillus reuteri 100-23]
Length = 791
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 202/678 (29%), Positives = 331/678 (48%), Gaps = 88/678 (12%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 146 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
+ +HPL+ LR + V DI
Sbjct: 303 LRKA------RHPLI---DLRRV--------------------------------VTNDI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDCQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G +
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGINP 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDDSQDLNNMIGDLVEQRKKAREESERLAKLVAKNEKVQRDLDEK 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--S 560
+ + L + + +++ AK + D ++ + LR + + +KE+E
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRII----HHLRQLEVQQGGN-VKENELID 611
Query: 561 AIAAIVEAHRPD---DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A + HR + + SV + G+ V VKS G + ++ G+ V
Sbjct: 612 AQGQLNALHRDNPRLQNNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-V 669
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++ + +N++ + A P Q++D + + QT
Sbjct: 670 QIGILKMEIDENSLEKV-------AKKDLP----QEKDARRRPRAAVRT-------TQTR 711
Query: 678 KNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PRV
Sbjct: 712 KTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPRV 771
Query: 734 AKYEQESPMNYGCTVAYI 751
+ SP N G A I
Sbjct: 772 KSFSYASP-NAGGDGATI 788
>gi|294617527|ref|ZP_06697157.1| MutS2 family protein [Enterococcus faecium E1679]
gi|291596133|gb|EFF27396.1| MutS2 family protein [Enterococcus faecium E1679]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 212/728 (29%), Positives = 349/728 (47%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 574
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 575 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
ET T + G++V V + G + + + + + V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQRGMLLRK---NGNQWQVEIGILKMN 676
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 686 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 QGGNGATI 782
>gi|226323501|ref|ZP_03799019.1| hypothetical protein COPCOM_01276 [Coprococcus comes ATCC 27758]
gi|225208185|gb|EEG90539.1| MutS2 family protein [Coprococcus comes ATCC 27758]
Length = 791
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 313/657 (47%), Gaps = 77/657 (11%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA ++ + +G+ + S++G+T F+EP V+ NN L E E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-NGLIHDQSATGSTLFIEPMAVVKLNNDLKELYAQEQEE 245
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+ + A+ EI+ ++E+D FA+ A M+ P+ +++
Sbjct: 246 IQVILARLSVDAAEYIEEIRLNYKALVELDFIFAKGALALDMNASRPVFNTEGR------ 299
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I I +HPLL + VPI + +
Sbjct: 300 IRIREGRHPLLDRKKV-----------------------------------VPISLTLGD 324
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
++VITGPNTGGKT S+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+E
Sbjct: 325 TFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFNQVYADIGDEQSIE 384
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ +V L V SLVL DE+G+GTDP+EG ALA +IL +L +R +
Sbjct: 385 QSLSTFSSHMTNVVSFLNHVDENSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTMA 444
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L ENA EF +ETL PTY +L G G SNA I++ +G IIQ
Sbjct: 445 TTHYSELKVFALSTPGVENACCEFDVETLSPTYHLLIGIPGKSNAFAISEKLGLPDYIIQ 504
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ L E + +L L + R+ +E + AS E+ L E++++ + L
Sbjct: 505 DAKT---HLTEEDESFE--DLLTDLEQSRKTIEKEREEVASYRREMERLKSELKNQQEKL 559
Query: 507 ----DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESA 561
DR A+ T VQ+ +FA D +++F + + SA E+ +
Sbjct: 560 DTQRDRIIREANARATDIVQEAKDFA----DETMKNFRKFGKASISASEMEKERERIRKQ 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
++ +R + S F G+ V V S+ + TV +P + VQ G
Sbjct: 616 LSKTENKNRLEKKKPSKAYKASDF--HLGDSVKVLSM-NLTGTVNSLPDAKGNLFVQMGI 672
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+R +V +++ PI P KQ SG + G + S +
Sbjct: 673 LRSQVNISDLEPI--------EEPLTVTAKQMRRTSSG-------KMKMGKSMHVSPE-I 716
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A S + ++HG GTG ++ + + LR + +
Sbjct: 717 NLLGKTVDEAVAELDKYLDDAYIAHLSPVRIVHGKGTGALRNGIHQYLRRQKHIKSF 773
>gi|408411562|ref|ZP_11182705.1| MutS2 protein [Lactobacillus sp. 66c]
gi|407874274|emb|CCK84511.1| MutS2 protein [Lactobacillus sp. 66c]
Length = 788
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 220/743 (29%), Positives = 346/743 (46%), Gaps = 142/743 (19%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS L +R +R N E +++ + +Q + + ++T R R + +
Sbjct: 149 VLDTASAALASLRHDRLANETEIKEKMNAYTRGKMSQY-----LSEAVVTIRDDRYVIPV 203
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++Y G+ + S+SG T F+EP+ + NN L E E IL L+
Sbjct: 204 KQEYRYKFG-GVVHDQSASGQTLFVEPEAILVLNNRLQNLLAEERQEIHRILHDLSLAAG 262
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I+ + + ++D A+A A+ M +SQ ++ D S+ + +HPL+
Sbjct: 263 EERETIQLVAGALSQLDFLSAKAKLAKKMR------ASQPAITTDQSVKLLAARHPLI-- 314
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K V DI + + V+ITGPNTG
Sbjct: 315 -------------DPAKV--------------------VANDICLGQDFDTVLITGPNTG 341
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KTLGL SLM+++GL++PA ++ FD I ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 342 GKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDI 401
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I++ V+ +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 402 VAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISILDFFRKKQAKIMVTTHYPELKLYGYS 461
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+ +
Sbjct: 462 RERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSDI 521
Query: 460 QQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKDLDRRAAHL 513
H EL + E R+KL+S A +L ++ +D+Y
Sbjct: 522 N-HMIDELNKQTKLATENRQKLQSSLDRAKNLEKQLRDALDIY----------------- 563
Query: 514 KAKETQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEI 551
Q+VQ++L+FA + + D ++ D E NQL DA E
Sbjct: 564 ----NQRVQKQLDFAQERANEIVAKKRKKADKIIADLEEARKNGANIKENQLMDAKG-EF 618
Query: 552 NSLIK-ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
N L K E+ A +++ + +V G++V V S G + TV + G
Sbjct: 619 NQLAKQEANLAKNKVLQKEKKRHHVAV------------GDKVKVLSYG-QTGTVTKKLG 665
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D + V G+++++V +I + S G A+
Sbjct: 666 DHEYE-VALGRIKLKVSDRDIDKLAAS----------------------GDGRGKVRATS 702
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIALACW--ESRSVLFVIHGMGTGVVKERVLEILR 728
R +++ LDLRG R EEA LD + S + ++HG+GTG +++ V + L+
Sbjct: 703 ASRSSRARSQLDLRGQRYEEAMINLDRYFDTFLLSGLSTVTIVHGIGTGAIRQGVQQYLK 762
Query: 729 NHPRVAKYEQESPMNYGCTVAYI 751
+ V + +P N G T A I
Sbjct: 763 RNKHVKSFAY-APANEGGTGATI 784
>gi|89098890|ref|ZP_01171770.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
gi|89086294|gb|EAR65415.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
Length = 784
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 229/760 (30%), Positives = 355/760 (46%), Gaps = 117/760 (15%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLK 71
L E + L ELEE I ID + LD AS+ L IR + + R E L+S+++
Sbjct: 119 LTEYMDRVIVLAELEEAIRMAIDENGEM-LDSASDALRSIRTQLRTRESRVRERLESMIR 177
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
A A + +IT R R + +K ++ GI + SSSG T F+EP+ V+
Sbjct: 178 SSNA----AKMLSDAIITIRNDRFVIPVKQEYRGHY-GGIIHDQSSSGQTLFIEPQAIVQ 232
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN + E E IL L+ A + E+ +++ + E+D FA+ +++ +
Sbjct: 233 LNNELQSIRVKEQQEIERILVELSGRAAAYQPELDMIVEVLAEVDFMFAKGRYSRRLKAS 292
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P V+ + IN+ +HPLL + A +N
Sbjct: 293 KP------EVNNERRINLFKARHPLL------QIDEAVAN-------------------- 320
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +
Sbjct: 321 ---------DISLGRDYTTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQIPALDGSEVSV 371
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
F + ADIGD QS+EQ+LSTFS H+ IVDIL ESLVL DE+G+GTDP EG ALA
Sbjct: 372 FGAVYADIGDEQSIEQSLSTFSSHMVNIVDILAKADFESLVLFDELGAGTDPQEGAALAI 431
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SIL + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 432 SILDEVYKRGSRVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNA 491
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RT 484
I++ +G D +I+ A+ V + + SL + RR+ E + R
Sbjct: 492 FEISRRLGLDNSVIESARSHVSE-----DSSQIENMIASLEDSRRQAEKELEEAHELLRG 546
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL-----NFAKVQIDTVVQDF 539
A LH ++ E ++ ++ +AA A ++ + E + K++I+ +
Sbjct: 547 ADMLHKDMQKQMMEYYEQKDEMQEKAAAKAADIVEKAKAEAEEIIRDLRKMRIEKHAEVK 606
Query: 540 ENQLRDASADEINSLIKESESAIAAIVEAHRPDD-DFSVSETNTSSFTPQFGEQVHVKSL 598
E++L DA ++ K S+S EA + D DF+ G++V V +
Sbjct: 607 EHELIDARKKLEDAAPKVSKSK----KEARKSDKHDFAA------------GDEVKVLTF 650
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K ++E +D+ VQ G ++++VK+ ++ I + P P+ K
Sbjct: 651 GQK-GHLLERASEDEW-QVQIGILKMKVKERDLEFIKS--------PKPKETK------- 693
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGM 714
A ++ G LDLRG R E+A +D AL R + +IHG
Sbjct: 694 AMAIVKGRDSHVGL-------ELDLRGERYEDALIRVEKYIDDALLSNYPR--VSIIHGK 744
Query: 715 GTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
GTG +++ V E L+NH V ++ + G TV K
Sbjct: 745 GTGALRQGVQEYLKNHRSVKRIRFGEAGEGGSGVTVVEFK 784
>gi|15644034|ref|NP_229083.1| DNA mismatch repair protein [Thermotoga maritima MSB8]
gi|418044562|ref|ZP_12682658.1| MutS2 protein [Thermotoga maritima MSB8]
gi|7387923|sp|Q9X105.1|MUTS2_THEMA RecName: Full=MutS2 protein
gi|4981836|gb|AAD36353.1|AE001783_4 DNA mismatch repair protein, putative [Thermotoga maritima MSB8]
gi|351677644|gb|EHA60791.1| MutS2 protein [Thermotoga maritima MSB8]
Length = 757
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 222/745 (29%), Positives = 343/745 (46%), Gaps = 101/745 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS L E + E E++ CI+ I DRAS L IR E+KR L S +K+
Sbjct: 106 YSRLKETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKR 160
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A + + + + R R +KAS K + GI ++SSSGAT F+EP V
Sbjct: 161 KADDFVRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-RGIVHHLSSSGATVFLEPDEFV 219
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 220 ELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNG 279
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V S I + +HPL+ +
Sbjct: 280 TV--------VKPSSRIRLVNARHPLIPKERV---------------------------- 303
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L
Sbjct: 304 -------VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELK 356
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA
Sbjct: 357 VFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALA 416
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+I++ L ++ VTTH + NA+ EF ETL PTYR+L G G S+
Sbjct: 417 IAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSH 476
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G D++II+ A R R R++ L +SL E+ LE + R
Sbjct: 477 AFQIAEKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKERE 531
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E M L + E++ K L R KE +++ + K ++D + + + S DE
Sbjct: 532 EYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDE 587
Query: 551 INSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +K +E + D + + E P G+ V ++ G + VVEV
Sbjct: 588 MREAVK--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV- 635
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
T LV +G +R++V P +LRK +++ + ++ S + +S
Sbjct: 636 -KSGTALVDFGFLRLKV------------------PVSKLRKTKKEEKKETSTFSYKPSS 676
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
+ + +D+RGM VEEA + I S ++IHG GTG + V EIL
Sbjct: 677 F-------RTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEIL 729
Query: 728 RNHPRVAKYEQESPMNYGCTVAYIK 752
R RV + +P G V ++
Sbjct: 730 RKDKRVVSFRFGTPSEGGTGVTVVE 754
>gi|423373498|ref|ZP_17350837.1| MutS2 protein [Bacillus cereus AND1407]
gi|401096462|gb|EJQ04509.1| MutS2 protein [Bacillus cereus AND1407]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 352/744 (47%), Gaps = 103/744 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 185 -LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EVIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I++A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + + + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVA--KYEQESPMNYGCTVAYIK 752
V +Y G TV +K
Sbjct: 763 RGVKTFRYGDMGEGGLGVTVVELK 786
>gi|430825904|ref|ZP_19444102.1| MutS2 protein [Enterococcus faecium E0164]
gi|430445612|gb|ELA55342.1| MutS2 protein [Enterococcus faecium E0164]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 215/733 (29%), Positives = 353/733 (48%), Gaps = 121/733 (16%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 156
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 157 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 457 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-------AIVEAH 569
+++++ A + VV + E + A++I I++ + I +++A
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEK-----AEKIIDDIRKMQQQIGQGNVKEHQLIDAK 614
Query: 570 RPDDDFSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ ET T + G++V V + G + T++ G+ V+ G
Sbjct: 615 TQLANLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIG 671
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+++ V ++ + P+ AP Q+E Q +E +S+ P N
Sbjct: 672 ILKMNVSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQ 710
Query: 681 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG R EEA ++D L A + ++HG GTG +++ + + L+NH V +E
Sbjct: 711 LDLRGKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF 770
Query: 739 ESPMNYGCTVAYI 751
+P N G A I
Sbjct: 771 -APANQGGNGATI 782
>gi|228987801|ref|ZP_04147910.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771849|gb|EEM20306.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 786
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 218/746 (29%), Positives = 356/746 (47%), Gaps = 107/746 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 185 -LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I++A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKE 557
+ + DR LKA+ ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEA 613
Query: 558 S---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPG 610
E A +V+ + N + P+ G++V V + G K + +V
Sbjct: 614 KSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS- 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D VQ G ++++VK++N+ I KQ E + + + S
Sbjct: 664 -DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKGRDYHVSL 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 ---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLK 760
Query: 729 NHPRVA--KYEQESPMNYGCTVAYIK 752
H V +Y G TV +K
Sbjct: 761 KHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|229032198|ref|ZP_04188171.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
gi|228728978|gb|EEL79981.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
Length = 786
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 212/726 (29%), Positives = 346/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLINVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|291533994|emb|CBL07107.1| Mismatch repair ATPase (MutS family) [Megamonas hypermegale
ART12/1]
Length = 611
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 58/533 (10%)
Query: 18 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 73
E K+ L +LE +I +D + + D AS +L IR E ++R NLD +LK
Sbjct: 117 EWAKSIEILGQLEREIDNIVD-EHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNP 175
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
Q + I +T R R + IK ++ P G+ + SSSG+T F+EP V+ N
Sbjct: 176 DYQKYFQDNI----VTIRDERYVIPIKQEYRQQFP-GVVHDQSSSGSTLFIEPMSIVDLN 230
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N +L E E IL +++ +IA++ + + + + ++D AFA+A A+ M P
Sbjct: 231 NDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMP 290
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
++ + +N+ +HPLL
Sbjct: 291 ------EINDEGIVNLAKARHPLL-----------------------------------N 309
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
D VPIDI++ R ++ITGPNTGGKT SMKTLGL LM+++GL++P ++ ++ F
Sbjct: 310 KDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQ 369
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
+ ADIGD QS+EQ+LSTFS H+ IV+IL + + L+L+DE+GSGTDP EG ALA SI
Sbjct: 370 NVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSI 429
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L+ L + V TTHY +L ENA EF +++LRPTYR+L G+ G SNA
Sbjct: 430 LERLMEIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFA 489
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEI 492
I+K +G +I RAQ+L+ + H + E + +L E+ E + A I
Sbjct: 490 ISKRLGLSDTLILRAQQLI------KADHAQFENVLNTLENEKLMYEQKNADIAERQQRI 543
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 545
L +++ D +++ ++ K +Q L + + + ++++ + Q D
Sbjct: 544 EKLEKQLADMKQEMAKKKEQTLRKTKEQCASLLRRTRRESEEIIKELKAQFND 596
>gi|104774409|ref|YP_619389.1| DNA mismatch repair protein MutS2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423490|emb|CAI98392.1| DNA mismatch repair protein MutS2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 787
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 227/738 (30%), Positives = 344/738 (46%), Gaps = 132/738 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 518 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 555
Q+VQ++L+FA + + D V+ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKVIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
K+ E +A V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ-EVNLAK----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-Y 668
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V G+++++V I + +++ A A+ R
Sbjct: 669 EVSLGRIKLKVTDRYIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 734 AKYEQESPMNYGCTVAYI 751
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|196034369|ref|ZP_03101778.1| MutS2 family protein [Bacillus cereus W]
gi|218905777|ref|YP_002453611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH820]
gi|228929599|ref|ZP_04092617.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|226723044|sp|B7JR57.1|MUTS2_BACC0 RecName: Full=MutS2 protein
gi|195992911|gb|EDX56870.1| MutS2 family protein [Bacillus cereus W]
gi|218535887|gb|ACK88285.1| MutS2 family protein [Bacillus cereus AH820]
gi|228829986|gb|EEM75605.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 786
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 219/753 (29%), Positives = 358/753 (47%), Gaps = 98/753 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLA 603
+ + LI+ E A +V+ + V+ NTS + G++V V + G K
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTSPKQQLRAGDEVKVLTFGQKGQ 657
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
+ +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 658 LLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKG 702
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
+ S LDLRG R E A +++ L A S + +IHG GTG +++
Sbjct: 703 RDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQ 753
Query: 722 RVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V + L+ H V +Y G TV +K
Sbjct: 754 GVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|385813225|ref|YP_005849618.1| MutS2 protein [Lactobacillus helveticus H10]
gi|323465944|gb|ADX69631.1| MutS2 protein [Lactobacillus helveticus H10]
Length = 785
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 213/730 (29%), Positives = 345/730 (47%), Gaps = 111/730 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + + N E++ + + + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRM-----DAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSSLAR 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASKPKLTQ------DHSLELRNARHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K VP DI++ ++ ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDSDTMLITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -SDEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESE--SAIAAIVEAH 569
+VQ++L+FA+ + + VV R AD+I N +KE++ A +
Sbjct: 563 RVQKQLDFAQERANEVVAK-----RRKKADKIIAELEKQKNVGVKENKIIEAKGELNSLE 617
Query: 570 RPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
R + + V + G+QV V S G + T+ + + + VQ G ++V+V
Sbjct: 618 RQAHNLAHNKVLQREKRRHHVSVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGIIKVKV 675
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
+I I KN A P +L + A+ R + + LDLRG
Sbjct: 676 SDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAHSELDLRGQ 715
Query: 687 RVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPM 742
R +EA LD I A ++ +IHG+GTG +++ V + LR NH + Y +
Sbjct: 716 RYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGFNYAPANEG 775
Query: 743 NYGCTVAYIK 752
G T+ +K
Sbjct: 776 GNGATIVKLK 785
>gi|423389147|ref|ZP_17366373.1| MutS2 protein [Bacillus cereus BAG1X1-3]
gi|401642422|gb|EJS60133.1| MutS2 protein [Bacillus cereus BAG1X1-3]
Length = 786
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 351/738 (47%), Gaps = 102/738 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLV 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAS 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 751 LRQGVQDYLKKHRGVKNY 768
>gi|423615062|ref|ZP_17590896.1| MutS2 protein [Bacillus cereus VD115]
gi|401261918|gb|EJR68069.1| MutS2 protein [Bacillus cereus VD115]
Length = 786
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 212/726 (29%), Positives = 345/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L R NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNRERVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 557 QIIEFNEERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|395243119|ref|ZP_10420106.1| MutS2 protein [Lactobacillus hominis CRBIP 24.179]
gi|394484349|emb|CCI81114.1| MutS2 protein [Lactobacillus hominis CRBIP 24.179]
Length = 787
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 203/714 (28%), Positives = 346/714 (48%), Gaps = 82/714 (11%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD ASE L +R + N ++ +K + + G +IT R R V +
Sbjct: 146 VLDTASEKLARLRHDINANEIDIKNHMQRYVKGNSTKYLSEG-----IITIRDGRYVVPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K +K G+ + S+SG T F+EP+ + NN + L E E AIL L+ I
Sbjct: 201 KQEYKNKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQDLLAQERQEVRAILDHLSRLIT 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ E+ ++++D A++ A+ M PIL+ D + ++ +HPL+
Sbjct: 260 QYLDEVSANAKALMQLDFLSAKSKLAKDMHATEPILTK------DQVVELKKARHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K V DI++ ++ITGPNTG
Sbjct: 312 -------------DPKKV--------------------VANDIELGKSFDTMLITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KTLGL LM+++GL++ A ++ F I ADIGD QS+EQ+LSTFS H+ +I
Sbjct: 339 GKTITLKTLGLLQLMAQSGLFITANEESKVGVFQEIYADIGDEQSIEQSLSTFSSHMDQI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ I+ V+ + LVLIDE+G+GTDP EG +LA +IL YL+ + V+TTHY +L
Sbjct: 399 IKIMRNVTNQDLVLIDELGAGTDPEEGASLAIAILDYLQAKDCKIVITTHYPELKLYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+ NA+ EF ++TL PTY++ G G SNA IA +G D+ ++ A+ LV +
Sbjct: 459 RVKTTNASMEFDIKTLSPTYKLRIGIPGQSNAFAIASHLGMDKTVVDAARSLV-----KD 513
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ + + + L ++ +K ES +T + ++L R+++D +++ K +
Sbjct: 514 EDSDINRMIERLSDQTKKAESLRQTLEKKVDQSIELQRKLQDGLDWYNQQVNRQLEKAQE 573
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + + + + D ++ D ENQ R + + N +I +++ A+ ++ + + V +
Sbjct: 574 KANEIIAKKREKADKIIADLENQRRSGAQIKTNKII-DAKGALNSLEKESNNLANNRVLQ 632
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G+ V V S G ++ + + + + VQ G ++V+ +I
Sbjct: 633 REKRRHDVKVGDTVKVLSYG-QMGHITKKLSEHE-YEVQIGILKVKASDRDI-------- 682
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 697
+ + P P+ + +Q R +S G R Q + LDLRG R EEA LD I
Sbjct: 683 EKTSLPKPK-KSEQIVR-----------SSKGLRSQNVRAELDLRGQRYEEAMTNLDRYI 730
Query: 698 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
A + + +IHG+GTG ++ V + L+ + V + +P N G T A I
Sbjct: 731 DAALLSGLNTVTIIHGIGTGAIRNGVNQYLKRNRHVKDFGY-APANEGGTGATI 783
>gi|423640379|ref|ZP_17615997.1| MutS2 protein [Bacillus cereus VD166]
gi|401281295|gb|EJR87208.1| MutS2 protein [Bacillus cereus VD166]
Length = 786
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 360/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAETLR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|228954821|ref|ZP_04116841.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229112016|ref|ZP_04241559.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|423426676|ref|ZP_17403707.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|423437985|ref|ZP_17414966.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|423502774|ref|ZP_17479366.1| MutS2 protein [Bacillus cereus HD73]
gi|449091504|ref|YP_007423945.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228671339|gb|EEL26640.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|228804810|gb|EEM51409.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110242|gb|EJQ18151.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|401119598|gb|EJQ27409.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|402460013|gb|EJV91741.1| MutS2 protein [Bacillus cereus HD73]
gi|449025261|gb|AGE80424.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 786
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 360/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|327475227|gb|AEA77208.1| MutS2 [Bacillus sp. 15.4]
Length = 784
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 225/734 (30%), Positives = 347/734 (47%), Gaps = 101/734 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLK 71
L E + LT LE KI +D ILD AS+ L IR++ + N E L+ +++
Sbjct: 119 LSEKVSEMMVLTPLEHKIRAVVDENG-AILDSASDPLRQIRSQIRANEGRIREKLERMIR 177
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--YLLPDGIALNVSSSGATYFMEPKGA 129
AQ + I IT R R + +K ++ Y GI + SSSG T F+EP+
Sbjct: 178 SSNAQKMLSDAI----ITIRNDRYVIPVKQEYRGNY---GGIIHDQSSSGQTLFIEPEVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V NN L E E IL+ LT E++ ++ ++ + +ID F +A + + +
Sbjct: 231 VTLNNALRELKLKEGLEIERILTELTVEVSGYSEDLLTIVAILADIDFMFTKAKYGKSIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
G P ++ + + + + +HP+L P++ V N
Sbjct: 291 GTKPEINGEQVLKLNRA------RHPML----------------PIEEAVAN-------- 320
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
DI++ + +VITGPNTGGKT ++KT+GL +LM +AGL +PA + ++
Sbjct: 321 -----------DIELGKDFSSIVITGPNTGGKTVTLKTVGLLTLMGQAGLQIPALDGSKM 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F + ADIGD QS+EQ+LSTFS H+ IVDIL V ESLVL DE+G+GTDP EG AL
Sbjct: 370 GVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGKVDHESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + R V TTHY +L NA+ EF +ETL PTY++L G G S
Sbjct: 430 AISILDEVHQRGAKVVATTHYPELKAYGYNRDGVINASVEFDVETLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + E + + SL + R+ ES A L
Sbjct: 490 NAFEISKRLGLADRVINRAKSHIGTDSKEIEN-----MIASLEKSRKDAESDYDEAHELL 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ ++++++ + + + L K + Q + AK + + V++D + SAD
Sbjct: 545 KQADMMHKDMQKQMMEFYDKRDSLYEKAELKASQVVEKAKEEAEEVIRDLRKMRLEKSAD 604
Query: 550 EINSLIKESESAIAAI-VEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATV 605
+KE E A +E P+ D S + T P G++V V + K +
Sbjct: 605 -----VKEHELIDAKKRIEGAAPNLDRSKPKKASTGQRELKP--GDEVKVLTFDQKGHLI 657
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+V + VQ G M+++VK+++++ I K+ P + +D G
Sbjct: 658 EKVSSKE--WQVQMGIMKMKVKESDLQFIQAEKK---VETKPMATVKGKDFHVGL----- 707
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 721
LDLRG R E A +D AL R + +IHG GTG +++
Sbjct: 708 --------------ELDLRGERFENALSRVEKYIDDALLAGYPR--VSIIHGKGTGALRQ 751
Query: 722 RVLEILRNHPRVAK 735
V E L+NH V +
Sbjct: 752 GVQEYLKNHRSVKR 765
>gi|206969500|ref|ZP_03230454.1| MutS2 family protein [Bacillus cereus AH1134]
gi|229072054|ref|ZP_04205263.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|229081805|ref|ZP_04214297.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|229180871|ref|ZP_04308206.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|229192752|ref|ZP_04319710.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|365158667|ref|ZP_09354859.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|206735188|gb|EDZ52356.1| MutS2 family protein [Bacillus cereus AH1134]
gi|228590591|gb|EEK48452.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|228602428|gb|EEK59914.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|228701393|gb|EEL53887.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|228710988|gb|EEL62954.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|363626540|gb|EHL77523.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
Length = 786
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 360/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|297588543|ref|ZP_06947186.1| MutS2 protein [Finegoldia magna ATCC 53516]
gi|297573916|gb|EFH92637.1| MutS2 protein [Finegoldia magna ATCC 53516]
Length = 783
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 352/731 (48%), Gaps = 115/731 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR +++ EN+ + + + QA + + ++T R R + +K SH
Sbjct: 146 ISDNASRNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSH 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + SSSG T ++EP VE NN L E E IL ++ + ++
Sbjct: 204 KSSFK-GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDAKD 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I D + +D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 263 SIFVDQDVLSRLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI I + + +VITGPNTGGKT
Sbjct: 316 ----------------------------------VPISIYLGDDYNTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+
Sbjct: 342 TLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIV 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
++ SLVL DE+G+GTDP+EG ALA +IL+ D+ + TTHY+ L +
Sbjct: 402 NNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLDKSIRTIATTHYSQLKIFALTEKYV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
+N + EF + TL PTY++ G G SNA I++ +G D II A++++ Q+ +
Sbjct: 462 KNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDK 515
Query: 464 KSELYQSLME-ERRKLESQAR---TAASLHAEIMDLY-REIE----------DEAKDLDR 508
E S +E E+++++ R ++ D Y +E+E +EAK+ +
Sbjct: 516 DFEDVLSDIESEKKQIDEDKRRQLELKEDLLKLRDRYEKELEKTKLEKERIINEAKE-NA 574
Query: 509 RAAHLKAK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAI 565
+++AK E++++ +L F + + D TV D E++ N IK+S S
Sbjct: 575 NEIYMQAKEESRELINKLKFLEKESDARTVANDVESKF--------NKRIKKSPSKKL-- 624
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
++ET+ Q G++V + + D+ T+V P +LVQ G +++
Sbjct: 625 -----------LNETSKKQ-NLQLGDEVEILGI-DQQGTIVSEPDKKGDLLVQVGILKIN 671
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
N++ I K+QE QS + S + + K+ +DLRG
Sbjct: 672 ANVKNLKKI----------------KEQEVIQSSKSIKSIIKNKANSDI---KSEIDLRG 712
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SP 741
+EEA ++LD I + +IHG GTG++++ + E LR+ R+ K E +
Sbjct: 713 KNIEEAIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRIKKIEDAGYNE 772
Query: 742 MNYGCTVAYIK 752
G T Y+K
Sbjct: 773 GGLGATFIYLK 783
>gi|313889740|ref|ZP_07823382.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|416851675|ref|ZP_11908820.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313121785|gb|EFR44882.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|356739164|gb|EHI64396.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 777
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 346/719 (48%), Gaps = 108/719 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L IR R M + ++ ++++ I + G + + LI R R + +K ++++
Sbjct: 147 ASPELATIR----RKMTDSENQVRQLLQDILKKYGNFLSESLIASRNGRSVLPVKNTYRH 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG T ++EP+ V+ N +L E E T IL L+ + R +
Sbjct: 203 KVA-GVVHDISASGNTVYIEPRALVQLNEEITQLHADERHEITRILKSLSDMLRPHSRAL 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D A+ + + P +S D SI + ++HPLL
Sbjct: 262 TNNAWLIGHLDFVKAKYCYLRDYKASLP------KISVDKSIQLLNVRHPLLKN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PVP D+ + V+VITGPNTGGKT +
Sbjct: 310 -------------------------------PVPNDLHFSRQLSVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M ++GL + A + F+ I ADIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 339 KTLGLAQIMGQSGLPILADQGSTIAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVAILDE 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+++SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ANQDSLVLFDELGAGTDPQEGASLAMAILEQLRLTEIKTMATTHYPELKAYGIETAFVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF +L+PTY + G G SNA IA+ +G I+ +A+++ + S
Sbjct: 459 ASMEFDSRSLKPTYHFMQGVPGRSNAFEIARRLGLADPIVNQAEQMTD---------SDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + E E++ LES+ R +D +E+E + +R L + Q +E
Sbjct: 510 DVNRIIEELEKQTLESRHR---------LDHIKEVEQDNLKFNRAVKKLYYEFAQAKDKE 560
Query: 525 LNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
+ A ++ +V ++ +L +ASA + + +I E++ + +V P D +
Sbjct: 561 IEKASLEAQEIVNLALAESEEILAKLHEASALKPHQII-EAKGQLKKLV----PKTDLTK 615
Query: 578 SETNTSSFT---PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + PQ G+ + V + G + + +V GD V KM + ++ + +
Sbjct: 616 NKVLKKAKKLRQPQAGDDILVTAYGQRGTLLKQVKGDKWEAQVGLIKMTLNEEEFQLVKV 675
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
+K P+ + ++S S+ GPR + LDLRG R EEA +
Sbjct: 676 AEESQK------PKKQTLNVIKRSTSS---------GPRAR-----LDLRGKRYEEAMQE 715
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK--YEQESPMNYGCTVA 749
LD I A + S + +IHG+GTGV++E V + LR H V Y ++ GCT+A
Sbjct: 716 LDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFGYAPQNAGGSGCTIA 774
>gi|291458229|ref|ZP_06597619.1| MutS2 protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418762|gb|EFE92481.1| MutS2 protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 826
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 315/684 (46%), Gaps = 92/684 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA +K P G+ + SS+GAT F+EP+ V NN L E E
Sbjct: 216 VITMRDGRYCLPVKAEYKSSFP-GMIHDQSSTGATLFIEPQSIVRRNNEIRELRAEEKRE 274
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+L L+A ++ + + + +D FA+A + M V P S + +S +
Sbjct: 275 IEKLLERLSASLSPHTEGLSENIRLLSHLDFVFAKAKLSLGMKAVRPRFSEKRALSLREA 334
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPL+ G D VPI I++
Sbjct: 335 ------RHPLIPG-----------------------------------DRVVPITIRLGS 353
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++VITGPNTGGKT +KT GL LM +AGL++PA L F I ADIGD QS+E
Sbjct: 354 DFTMLVITGPNTGGKTVCLKTAGLLQLMGQAGLFIPAAEGSELALFREIFADIGDEQSIE 413
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H+S V IL ESL L DE+G+GTDP+EG ALA +IL L +R ++
Sbjct: 414 QSLSTFSAHMSNTVRILREADEESLCLFDELGAGTDPTEGAALAMAILHTLHERGIRSIA 473
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHYA++ ENA EF L +L PTYR+L G G SNA I++ +G +II+
Sbjct: 474 TTHYAEIKVYALSTPGVENAGCEFDLNSLSPTYRLLIGVPGKSNAFAISRKLGLPEEIIE 533
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A + R E + ++ SL E R E + + EI + R + +K +
Sbjct: 534 DAGR-----RLEAGDVKLEDVIASLEESRITAERERQEIERYREEIAEYKRRARESSKGV 588
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS----ADEINSLIK----ES 558
++ + + ++ L AK D++V++ + + A+++ S +K E
Sbjct: 589 EKGRDKILNRAREEAASILAEAKETADSIVKELRKREQSGGSTLEAEKLRSGLKQELREL 648
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ + A P S ++ + G+ V V L + A V +P D+ + V
Sbjct: 649 QGELGKTERARGPARPLSKNKI-------RIGDIVRVLPL-NLTARVSTLPDRDEMLFVT 700
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS- 677
G +R +V ++ + AP L Q E Q G SS G RVQ +
Sbjct: 701 AGIIRTKVALKDLELLQR---------APAL--QTESGQRGGQKSSG-----GMRVQKAL 744
Query: 678 --KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP-- 731
+ L G EA +L L AC + ++HG GTG ++ V +LR P
Sbjct: 745 RISPEIKLIGKMTAEAMPELSKYLDDACLAHLPEVRIVHGRGTGALRNMVHGMLRKDPHI 804
Query: 732 ---RVAKYEQESPMNYGCTVAYIK 752
R+ +Y + S G T+AY K
Sbjct: 805 ESFRLGEYGEGSD---GVTIAYFK 825
>gi|259502869|ref|ZP_05745771.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
gi|259169236|gb|EEW53731.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
Length = 790
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 199/680 (29%), Positives = 325/680 (47%), Gaps = 87/680 (12%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P++T R R + + A ++ G+ + S+SG T ++EP +E NN RL +
Sbjct: 184 LSEPIVTVRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNN---RLRQA 239
Query: 143 EIAEETAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
+I E+ +L +L +A I+ +I + +D A+A +A + P+LS+
Sbjct: 240 QIEEKQEVLRVLAELSALISPYRHDILNNEQILGHLDFINAKASYAHELKASLPLLSA-- 297
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D+ +N+ HPL+ D V
Sbjct: 298 ----DNQVNLRKAWHPLI-----------------------------------ARDQAVA 318
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
DIK+ + + V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADI
Sbjct: 319 NDIKLGGDYQAVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADI 378
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QSLEQNLSTFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL +
Sbjct: 379 GDEQSLEQNLSTFSGHMENVKAILDQLTARSLVLLDELGAGTDPKEGAALAMAILDEIGQ 438
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
L ++TTHY +L + NA+ EF TL+PTYR+L G G SN L IAK +G
Sbjct: 439 WGSLVMITTHYPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLG 498
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
II AQ LV + + L+E+R++ + A L A+ E+
Sbjct: 499 IGSAIIGEAQSLV-----SDDSQDLNAMIGDLVEQRKRAREEGDRLAKLVAQNQADQEEL 553
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKES 558
+ + + L + Q ++ AK + D ++ +++ + + N LI ++
Sbjct: 554 NQKLDRFNEQRDRLLERARSQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLI-DA 612
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ A+ A+ + + SV + + G+ V VKS G ++ G+ VQ
Sbjct: 613 QGALNALHQDNPRLQHNSVLKRAKAKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQ 670
Query: 619 YGKMRVRVKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
G +++ + + ++ R +P RK P+ R K + R++ +
Sbjct: 671 IGILKMEIDERDLEKVAKRDLPKDDRK---QPSHRAVKTTQTRKTSA------------- 714
Query: 674 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
LDLRG R EEA +L I A + + +IHG GTG +++ + L+++P
Sbjct: 715 ------RLDLRGHRYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNP 768
Query: 732 RVAKYEQESPMNYGCTVAYI 751
RV + +P N G A I
Sbjct: 769 RVKSFSYAAP-NAGGDGATI 787
>gi|229093646|ref|ZP_04224746.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
gi|228689733|gb|EEL43540.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
Length = 786
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 357/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|229158157|ref|ZP_04286225.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
gi|228625319|gb|EEK82078.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
Length = 786
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 218/746 (29%), Positives = 355/746 (47%), Gaps = 107/746 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 185 -LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKE 557
+ + DR LKA+ ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEA 613
Query: 558 S---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPG 610
E A +V+ + N + P+ G++V V + G K + +V
Sbjct: 614 KSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS- 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D VQ G ++++VK++N+ I KQ E + + + S
Sbjct: 664 -DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKGRDYHVSL 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 ---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLK 760
Query: 729 NHPRVA--KYEQESPMNYGCTVAYIK 752
H V +Y G TV +K
Sbjct: 761 KHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|228910376|ref|ZP_04074191.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
gi|228849142|gb|EEM93981.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
Length = 786
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 215/734 (29%), Positives = 353/734 (48%), Gaps = 94/734 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQL- 602
Query: 550 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLAT 604
+N +K+ E A + +E P + + N + P+ G++V V + G K
Sbjct: 603 -VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVAKY 736
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKNY 768
>gi|302144008|emb|CBI23113.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 305/591 (51%), Gaps = 66/591 (11%)
Query: 94 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 153
R C+ A+ L G+ L+ S SG +EP A+ N+ + E +L
Sbjct: 228 RWCIKSGANLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLK 284
Query: 154 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF- 203
LT ++ +I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 285 LTEKMQMDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGH 344
Query: 204 -----------DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV------------- 239
+ ++++ HPLL+ +L A + + S+
Sbjct: 345 GTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGEKFNVK 404
Query: 240 ENSEMTVGSLSKGISDF----PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 295
E +++ + SL ++ PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+
Sbjct: 405 EETDINLSSLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMA 464
Query: 296 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 355
++GL++ A R+PWFD + ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+D
Sbjct: 465 RSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLD 524
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLET 414
E+G+GT+P EG AL S+L+ + L + TTH+++L LK + FENA EF
Sbjct: 525 EVGAGTNPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVN 584
Query: 415 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME- 473
L+PTY+ILWG G SNA+NIA+ +G +K++ +A+ E+ +E+ + +++
Sbjct: 585 LKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAR--------EQYGAASAEINEVIIDM 636
Query: 474 ERRKLESQARTAASLHAEIM--DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 531
ER K E Q R + + ++ DLY + + L + + + ++V + A+
Sbjct: 637 ERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSL 696
Query: 532 IDTVVQDFENQL----RDASADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNT 582
+ V+ + + +AD+ S AA + RP S V++ ++
Sbjct: 697 LHKKVRQLRSSATRPSQPTAADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSS 755
Query: 583 S--SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
S P+ G+ VHV SLG K ATV+EV ++VQ G M++++K ++
Sbjct: 756 SEKKRVPKVGDMVHVSSLGKK-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 805
>gi|423395169|ref|ZP_17372370.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|423406028|ref|ZP_17383177.1| MutS2 protein [Bacillus cereus BAG2X1-3]
gi|401655940|gb|EJS73468.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|401660697|gb|EJS78175.1| MutS2 protein [Bacillus cereus BAG2X1-3]
Length = 786
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 219/746 (29%), Positives = 355/746 (47%), Gaps = 107/746 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKHIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKE 557
+ + DR LKA+ ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIVEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQLVNVKDHELIEA 613
Query: 558 S---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPG 610
E A +V+ + N + P+ G++V V + G K + ++
Sbjct: 614 KSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKIS- 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 664 -DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 ---------ELDLRGERFENAMVRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLK 760
Query: 729 NHPRVA--KYEQESPMNYGCTVAYIK 752
H V +Y G TV +K
Sbjct: 761 KHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|400289481|ref|ZP_10791510.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
gi|399922119|gb|EJN94934.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
Length = 776
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 213/725 (29%), Positives = 345/725 (47%), Gaps = 110/725 (15%)
Query: 43 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 102
I D AS +L IR + ++N + + +L+++ + Q + + LI R R + +K +
Sbjct: 142 FIEDFASPELRQIRHKIQQNEQQIRQILQEMLKK--QGDLLAENLIASRNGRSVLPVKNT 199
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
+++ + G+ ++S+SG+T ++EP+ V N + E E T IL L+ +
Sbjct: 200 YRHRIA-GVVHDISTSGSTVYIEPRAVVNLNEDMTQARADERHEMTRILQALSDRLRPVV 258
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
I+ + +D A+ + + P L++ D +I + G++HPLL
Sbjct: 259 AAIRNNAWLLGHLDFVRAKYLYMREYQASVPSLTA------DKTIELLGVRHPLL----- 307
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
PV D+ + +T ++ITGPNTGGKT
Sbjct: 308 --------------------------------PHPVANDLHFDTDTTAILITGPNTGGKT 335
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
+KTLG+ LM+++GL + A + F I ADIGD QS+EQ+LSTFS H++ IVDI
Sbjct: 336 IMLKTLGITQLMAQSGLPILADQGSKTAIFKEIFADIGDEQSIEQSLSTFSSHMTHIVDI 395
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
L+ ++SLVL DE+G+GTDP EG ALA SIL++LR +VTTHY +L +
Sbjct: 396 LQAADKDSLVLFDELGAGTDPQEGAALAMSILEHLRLSNIKTMVTTHYPELKAYGIESDY 455
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 462
ENA+ EF + TL PTY + G G SNA IA+ +G I+ A+ L + + +
Sbjct: 456 VENASMEFDMVTLSPTYHFMQGVPGRSNAFEIARRLGLSEIIVSEAENLTD---TDSDVN 512
Query: 463 RKSELYQS-LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
R E +S +E RR+L D RE+E E +R L + +
Sbjct: 513 RIIERLESQTIESRRRL---------------DNIREVEQENLKFNRAVKKLYNEFSHAR 557
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAHR------P 571
+EL+ A+ + +V D + E +S++K +S+ ++EA P
Sbjct: 558 DKELDKARAKAQEIV--------DKALAESDSILKSLKAKSQLKPHEVIEAKSQLKVLAP 609
Query: 572 DDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
+ D S V + + G+ + V G + V ++ D Q G +++ +++
Sbjct: 610 EADLSKNRVLKKAKKKRAARVGDDIIVSGYGQRGTLVSQLK--DGRWEAQVGLIKMTLQE 667
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
N I K+ +A NP P+ + Q R S PR + LDLRG R
Sbjct: 668 NEFDLI---KKDSAKNP-PKKQVQVVKRSSQKV----------PRAR-----LDLRGKRY 708
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGC 746
EEA +LD I A + + + +IHG+GTGV++E V + LR + V ++ +P N G
Sbjct: 709 EEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKNVKEFGY-APQNAGG 767
Query: 747 TVAYI 751
+ A I
Sbjct: 768 SGATI 772
>gi|229019772|ref|ZP_04176575.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
gi|229025999|ref|ZP_04182383.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228735280|gb|EEL85891.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228741497|gb|EEL91694.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
Length = 786
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 351/738 (47%), Gaps = 102/738 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKVQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLV 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAS 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 751 LRQGVQDYLKKHRGVKNY 768
>gi|189425838|ref|YP_001953015.1| MutS2 family protein [Geobacter lovleyi SZ]
gi|189422097|gb|ACD96495.1| MutS2 family protein [Geobacter lovleyi SZ]
Length = 785
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 204/727 (28%), Positives = 343/727 (47%), Gaps = 105/727 (14%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
ILD AS++L IR ++ R + L+ +++ IF + IT R R + +
Sbjct: 144 ILDSASQELSQIRKAKRTLAARVRKKLEEFVRRHETAIF----LQDDFITIRSGRWVIPV 199
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
+ K ++P G+ +VSSSG T FMEP + F N LS E AEE IL L+A I
Sbjct: 200 RMDSKGMVP-GVVHDVSSSGETAFMEPLEIIPFVNELENLSAEEKAEEIRILRRLSAWIR 258
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ +I ++E+D + A FA+ P L+ + S+ + +HPLLL
Sbjct: 259 EDAEQIGACFKSLVELDRLDSVAAFAEKFSMSVPELNQ------NGSLRLLSARHPLLL- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ ++ P+ VP+D+++ ETRV+ I+GPN G
Sbjct: 312 ----VMREQQQDTTPI----------------------VPLDLELGNETRVLTISGPNAG 345
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL + M+ +G+ +PA +P D +L DIGD QS+EQ+LSTFS H++ I
Sbjct: 346 GKTIALKTVGLITAMALSGMPVPASPSSSIPLLDALLVDIGDDQSIEQSLSTFSAHVAAI 405
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
IL SLVL+DE+G+GT+P +G A+ ++L L+ R L + TTH ++ +
Sbjct: 406 AGILGQTGSRSLVLLDELGTGTEPLQGAAIGCAVLHELQSRGALVLATTHLTEIVGFVQR 465
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------- 451
+NA EF T P YR++ G G S+AL A+ G ++Q A+ L
Sbjct: 466 SQGMQNAGMEFDSATWTPLYRLVMGEPGQSHALETARRYGLPESVLQFARNLLGDAGTAF 525
Query: 452 ---VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 508
++ LR +R + ++ +ER++L+ A A+++ L +E ++A+
Sbjct: 526 AGIIDELRQKR--NALADELDRQQQERQRLDGLAMALKQQEADLVRLRQETIEKAR---- 579
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 568
Q + + A+ +++ +++ F+ R + + +E E++ A
Sbjct: 580 ----------QDARDTITAARREMNQLLEQFKQDRRKETEVKFRQKAEELEASFA----- 624
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
+ S+ Q G V V+SLG + ATV+ + V V+ G + + V
Sbjct: 625 -------PTGQQAPSADALQPGSIVQVRSLGRE-ATVISIDQARHKVRVRAGSIEMEVPL 676
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + I + A P PR + E + + + + N L+L G RV
Sbjct: 677 HGL--IIGT---TTAAPKPR--------------KNVPEINMKRQTEEAANDLNLIGKRV 717
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-- 744
EEA +L+ I A + + ++HG+GTG ++ V E L HP+VA + P
Sbjct: 718 EEALIELEGFIDQAILAGQREIRIVHGIGTGTLQRAVREFLGRHPQVAAFRPGEPHEGRD 777
Query: 745 GCTVAYI 751
G T+A +
Sbjct: 778 GVTIAEL 784
>gi|261418293|ref|YP_003251975.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. Y412MC61]
gi|319767747|ref|YP_004133248.1| MutS2 family protein [Geobacillus sp. Y412MC52]
gi|261374750|gb|ACX77493.1| MutS2 family protein [Geobacillus sp. Y412MC61]
gi|317112613|gb|ADU95105.1| MutS2 family protein [Geobacillus sp. Y412MC52]
Length = 792
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 357/717 (49%), Gaps = 86/717 (11%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS+ L +R + + R E L+S+++ +AQ + +IT R R + +
Sbjct: 154 VLDAASDRLRSLRGQIRSLEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPV 209
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ GI + S+SGAT F+EP+ VE NN E E IL L+A++A
Sbjct: 210 KQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVA 268
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ + ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 269 EQAEPLARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL-- 320
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D E + VP DI++ + +VITGPNTG
Sbjct: 321 ------------------DQEKA---------------VPNDIELGGDYTTIVITGPNTG 347
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 348 GKTVTLKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNI 407
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDIL LV ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 408 VDILRLVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYN 467
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 468 RPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SA 522
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ H + SL +++ E + A + E L E E + ++L+ A A+ TQ
Sbjct: 523 ESHNVENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQ 582
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + A+ + + ++Q+ ++ A+ + E++ +AA A + ++
Sbjct: 583 KAADIIRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAK 639
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
S Q G++V V SL K + +V DD VQ G +++++++ ++ I ++
Sbjct: 640 KAASRHVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSASA 697
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
K+ P ++ + A S E LDLRG R E+A +L+ L
Sbjct: 698 KD-VTPIATVKGK-------DAHVSLE--------------LDLRGERYEDALIRLEKYL 735
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
A + + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 736 DDAVLAGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|260102887|ref|ZP_05753124.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DSM
20075]
gi|260083300|gb|EEW67420.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DSM
20075]
Length = 785
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 213/735 (28%), Positives = 347/735 (47%), Gaps = 121/735 (16%)
Query: 44 ILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS L +R + + N E+ +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNHQQNLIAQEKQEVRNILKHLSSLAR 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQ------DHSLELRNARHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K VP DI++ + ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDYDTMLITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -SDEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHRP 571
+VQ++L+FA+ + + VV R AD+I N +KE++ I+EA
Sbjct: 563 RVQKQLDFAQERANEVVAK-----RRKKADKIIAELEKQKNVGVKENK-----IIEAKGE 612
Query: 572 DDDF----------SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ V + G+QV V S G + T+ + + + VQ G
Sbjct: 613 LNSLERQVHNLAHNKVLQREKRRHHVSVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGI 670
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
++V+V +I I KN A P +L + A+ R + + L
Sbjct: 671 IKVKVSDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAHSEL 710
Query: 682 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYE 737
DLRG R +EA LD I A ++ +IHG+GTG +++ V + LR NH + Y
Sbjct: 711 DLRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGFNYA 770
Query: 738 QESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 771 PANEGGNGATIVKLK 785
>gi|385825407|ref|YP_005861749.1| mismatch repair ATPase [Lactobacillus johnsonii DPC 6026]
gi|417837023|ref|ZP_12483263.1| recombination inhibitory protein MutS2 [Lactobacillus johnsonii
pf01]
gi|329666851|gb|AEB92799.1| mismatch repair ATPase [Lactobacillus johnsonii DPC 6026]
gi|338762702|gb|EGP13969.1| recombination inhibitory protein MutS2 [Lactobacillus johnsonii
pf01]
Length = 788
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 218/751 (29%), Positives = 350/751 (46%), Gaps = 98/751 (13%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 73
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-GVVHDQSASGQTLFVEPQAVLVLN 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+L+ Q HV I + +HPL+ +P K
Sbjct: 294 VLN-QDHV-----IKLRKARHPLI---------------DPKKV---------------- 316
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + L LIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLALIDELGAGTDPEEGASLAIAI 432
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNEAVVDKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 542
++ D++ L R+ + QQVQ++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSVTLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
V+ D VQ G ++V+V ++ I A A R
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAAPKKAERAVR-------------- 699
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
+S G R + + LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 700 -----SSRGLRSTRASSELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKRNRHVKSYNY-APANQGGTGATI 784
>gi|228993275|ref|ZP_04153191.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
gi|228766343|gb|EEM14986.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 223/740 (30%), Positives = 354/740 (47%), Gaps = 106/740 (14%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ + +D FARA +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMVLTEEVALEADTVLANVEVIANLDFIFARAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ + +N+ +HPL+ +P
Sbjct: 291 ATKPIVNNERY------MNLRQARHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ E + E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDK 601
+ + LI+ E A +V+ R V NT+ + G++V V + G K
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQK 655
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+ +V D+ VQ G ++++VK++++ I N P E + +
Sbjct: 656 GQLLKKV--SDNEWNVQIGILKMKVKESDMEYI------NTPQPV-------EKKAVATV 700
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGT 716
+ S LDLRG R E A ++ D LA + S +IHG GT
Sbjct: 701 KGRDYHVSL---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKNY 768
>gi|75762595|ref|ZP_00742445.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899706|ref|YP_002448117.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus G9842]
gi|228903069|ref|ZP_04067206.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|423358361|ref|ZP_17335864.1| MutS2 protein [Bacillus cereus VD022]
gi|423560939|ref|ZP_17537215.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|434377706|ref|YP_006612350.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
gi|226723045|sp|B7IJV1.1|MUTS2_BACC2 RecName: Full=MutS2 protein
gi|74489915|gb|EAO53281.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218542145|gb|ACK94539.1| MutS2 family protein [Bacillus cereus G9842]
gi|228856555|gb|EEN01078.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|401086048|gb|EJP94280.1| MutS2 protein [Bacillus cereus VD022]
gi|401202784|gb|EJR09634.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|401876263|gb|AFQ28430.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 216/734 (29%), Positives = 353/734 (48%), Gaps = 94/734 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQL- 602
Query: 550 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLAT 604
+N +K+ E A + +E P + + N + P+ G++V V + G K
Sbjct: 603 -VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVAKY 736
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKNY 768
>gi|347530511|ref|YP_004837274.1| DNA mismatch repair protein [Roseburia hominis A2-183]
gi|345500659|gb|AEN95342.1| DNA mismatch repair protein [Roseburia hominis A2-183]
Length = 795
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 228/753 (30%), Positives = 349/753 (46%), Gaps = 93/753 (12%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
L L LT L ++I CI + I D AS L IR + + + + + +
Sbjct: 119 LTSLFAGIEPLTPLCDEIRRCILSEDEIA-DDASSTLHSIRRSMRGMNDKIRAQMNSMIN 177
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ +IT R R C+ +KA K L+P G+ + SS+G+T F+EP V NN
Sbjct: 178 NTTTRSYLQDTVITMRDGRYCLPVKAEAKSLVP-GMIHDQSSTGSTLFIEPMAVVNLNNE 236
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
L E E IL+ L+ A ++ + + E+D FARA FAQ +GV P+
Sbjct: 237 YKELQLREQEEIEVILAGLSNLTASYATQLLADYELLTELDFIFARAAFAQTYNGVAPLF 296
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+ D I+I +HPLL +P K
Sbjct: 297 ND------DGRIHIRKGRHPLL---------------DPKKV------------------ 317
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VPID+++ + R++++TGPNTGGKT S+KT+GL +LM ++GL++PA L FD +
Sbjct: 318 --VPIDVRLGEDFRLLIVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPASERSELGIFDEV 375
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ I+ ILE V+ SLVL DE+ +GTDP+EG ALA SIL
Sbjct: 376 FADIGDEQSIEQSLSTFSSHMVNIIRILEQVNDRSLVLFDELCAGTDPTEGAALAISILS 435
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
L + TTHY++L ENA EF + TL PTYR+L G G SNA I+
Sbjct: 436 KLHLYGARIMATTHYSELKVYALSTPGVENACCEFDVATLSPTYRLLIGIPGKSNAFAIS 495
Query: 436 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 495
+ +G +I A+ R + + +L L + R +E + AEI L
Sbjct: 496 EKLGLPSDLITDAKG-----RISKSEGDFEDLIADLEKSRSTIEREQLEINQYKAEIESL 550
Query: 496 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
++E + + LD + + +Q L AK D +++F N+ A A ++ +
Sbjct: 551 KEKLEQKQERLDSSRNKILREANEQAYNILKEAKDVADETIRNF-NKYGKAGA-PVSEME 608
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSF----TPQ---FGEQVHVKSLGDKLATVVEV 608
KE + +A + +SE +S P+ G+ V V S+ K TV +
Sbjct: 609 KERTKLRGKMDKAAQ-----KMSEQKKASVPNHNVPKKLRIGDSVKVISMNLK-GTVHSL 662
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
P + VQ G +R V N++ + + AP +K Q+ SAG
Sbjct: 663 PNARGDLYVQMGILRSLVNINDLILLEE-------DAAPGTKKFQKT----SAG------ 705
Query: 669 SYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
+++ SK++ ++L G +EA LD L A + ++HG GTG ++
Sbjct: 706 ----KIKMSKSASVSTEINLIGKTTDEAIPLLDKYLDDAYLAHLPSVRIVHGKGTGALRN 761
Query: 722 RVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
V L+ V + + + G T+A K
Sbjct: 762 AVQAHLKRLKYVKSFHLGEFGEGDAGVTIAEFK 794
>gi|206977729|ref|ZP_03238620.1| MutS2 family protein [Bacillus cereus H3081.97]
gi|206744030|gb|EDZ55446.1| MutS2 family protein [Bacillus cereus H3081.97]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 351/744 (47%), Gaps = 103/744 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 185 -LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ HPL+ +P + VP +
Sbjct: 303 DLKQAC------HPLI---------------DP--------------------EVIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I++A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 557 QIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + + + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVATVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVA--KYEQESPMNYGCTVAYIK 752
V +Y G TV +K
Sbjct: 763 RGVKTFRYGDMGEGGLGVTVVELK 786
>gi|291545360|emb|CBL18468.1| MutS2 family protein [Ruminococcus sp. SR1/5]
Length = 793
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 215/729 (29%), Positives = 343/729 (47%), Gaps = 100/729 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAG 81
LT L +I CI + I D AS L IR A R L SL+ A Q
Sbjct: 128 LTPLSTEIRRCILSEDEIS-DDASSTLRQIRRSIKATNDRIHTQLSSLVAGSARNYLQ-- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+IT R R C+ +KA +K +P G+ + S++G+T F+EP V+ NN L
Sbjct: 185 ---DSVITMRDGRYCIPVKAEYKGQVP-GMIHDQSATGSTLFIEPMAVVKLNNDIRELEL 240
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL+ L+ ++A I + ++++D FARA A M+ P+ +++
Sbjct: 241 KEQKEIEVILASLSQQVAAELEAIHADLSIMVQLDFIFARAALAMDMNASEPVFNTEGR- 299
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
I + +HPL+ D + + VPID
Sbjct: 300 -----IRLRQARHPLI--------------------DKKKA---------------VPID 319
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + ++V+TGPNTGGKT S+KT+GL ++M ++GL++PA + L F + ADIGD
Sbjct: 320 IRLGDDFDLLVVTGPNTGGKTVSLKTVGLLTMMGQSGLHIPALDRSELALFREVYADIGD 379
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H++ +V L+ ++SLVL DE+G+GTDP+EG ALA +IL +L ++
Sbjct: 380 EQSIEQSLSTFSSHMTNVVSFLKSADQDSLVLFDELGAGTDPTEGAALAIAILSHLHEQG 439
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY++L ENA EF +ETLRPTYR+L G G SNA I+ +G
Sbjct: 440 IRTMATTHYSELKIYALSTPGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLP 499
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II +A++ + Q ++ SL + R +E++ A ++ +L + +++
Sbjct: 500 DFIIDKAKEQI-----SEQDESFEDVLTSLEQSRVTIENERAEIARYKEQVEELKKSLQE 554
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ + LD R + + +Q L K D ++ F +D + S+ KE ++
Sbjct: 555 KEEKLDERKERILREANEQAHAILRDTKEYADQTMKLFHKFQKDHV--DTASVEKERQNL 612
Query: 562 IAAIVEAH-----RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
+ +A R + S + G+ V V SL K TV P +
Sbjct: 613 KKRMSKAENGMSSRQQKQKPKKQLKPSDLS--LGDTVKVLSLNLK-GTVSSHPDSRGYLF 669
Query: 617 VQYGKMRVRVKKNNI----RPI---PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
VQ G +R +V +++ P+ P+ +R A R S +A S E
Sbjct: 670 VQMGIIRSKVHISDLELVDEPVITTPSMQRTGAGKI----------RMSKAASISTE--- 716
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 727
++L G V+EA +LD L A + ++HG GTG +++ V L
Sbjct: 717 -----------INLLGKTVDEAVAELDKYLDDAYIAHMKSVRIVHGKGTGALRKGVHNYL 765
Query: 728 RNHPRVAKY 736
+ VA +
Sbjct: 766 KRQKHVASF 774
>gi|359490844|ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
Length = 791
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 300/579 (51%), Gaps = 69/579 (11%)
Query: 94 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 153
R C+ A+ L G+ L+ S SG +EP A+ N+ + E +L
Sbjct: 239 RWCIKSGANLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLK 295
Query: 154 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF- 203
LT ++ +I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 296 LTEKMQMDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGH 355
Query: 204 -----------DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
+ ++++ HPLL+ +L A + DV SL+
Sbjct: 356 GTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKA-------RKDV--------SLAIS 400
Query: 253 ISDF-----PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
+S PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+++GL++ A
Sbjct: 401 VSYVLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPV 460
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
R+PWFD + ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+DE+G+GT+P EG
Sbjct: 461 RIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGA 520
Query: 368 ALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
AL S+L+ + L + TTH+++L LK + FENA EF L+PTY+ILWG
Sbjct: 521 ALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIP 580
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQARTA 485
G SNA+NIA+ +G +K++ +A+ E+ +E+ + +++ ER K E Q R
Sbjct: 581 GRSNAINIAERLGVPKKVLDKAR--------EQYGAASAEINEVIIDMERFKQEFQERVN 632
Query: 486 ASLHAEIM--DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 543
+ + ++ DLY + + L + + + ++V + A+ + V+ +
Sbjct: 633 DARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSA 692
Query: 544 ----RDASADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNTS--SFTPQFGEQ 592
+ +AD+ S AA + RP S V++ ++S P+ G+
Sbjct: 693 TRPSQPTAADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSSSEKKRVPKVGDM 751
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
VHV SLG K ATV+EV ++VQ G M++++K ++
Sbjct: 752 VHVSSLGKK-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 789
>gi|254724521|ref|ZP_05186304.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A1055]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSNRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|262039614|ref|ZP_06012908.1| MutS2 protein [Leptotrichia goodfellowii F0264]
gi|261746371|gb|EEY33916.1| MutS2 protein [Leptotrichia goodfellowii F0264]
Length = 779
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 202/752 (26%), Positives = 361/752 (48%), Gaps = 87/752 (11%)
Query: 8 NIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 67
N+ +Y + L + + ++E+ IG ++ I D AS L IR +++ N+
Sbjct: 108 NVRDKYKIIWGLFSDTEEVKDIEQFIGDAVNDDGNI-KDDASIGLRDIRRQKQNINANIK 166
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++ + I + +IT+R R + +K K L+ GI + S++G+T ++EP
Sbjct: 167 EKFDELMSGKDTQKAIQERIITQRNDRYVIAVKTDFKGLVK-GIEHDRSATGSTVYIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN E E IL LT I + EI + + + +D A+ ++
Sbjct: 226 NVVSLNNKLREYEAREREEIRKILLRLTELIRTKKEEIIRIKEILERLDFLNAKTAYSLN 285
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
P + ++ ++ + +HPL+ +++
Sbjct: 286 KKCTVPKIINKEYLKLVEA------RHPLIDENAV------------------------- 314
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPI+ ++ +++ITGPNTGGKT ++K GL +LM+ +G+ +PA
Sbjct: 315 ----------VPINFELGNNENIMLITGPNTGGKTVTLKVAGLLTLMALSGIPVPAHEKT 364
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+ F +LADIGD QS+EQNLS+FSGH+ +I +I+E V+ +SLVL+DE+GSGTDP EG
Sbjct: 365 EIGHFGNVLADIGDEQSIEQNLSSFSGHVKKIKEIVEQVNSKSLVLMDELGSGTDPMEGA 424
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
A A +I+ YL + +++TTHY+++ T ++A+ EF++ETL PTY++L G G
Sbjct: 425 AFAMAIIDYLNGKNIKSIITTHYSEVKAYAFNTTGIKSASMEFNVETLSPTYKLLEGIPG 484
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
+SNAL IA G +II A+ + + ++ +S+ E+ +LE
Sbjct: 485 ESNALIIAGKYGISEQIINSAKSYI-----SEDNQKVEQMLKSIKEKNDELE-------V 532
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
L E+ + RE+ED+ +++ ++ ++ + +++ A + V +N + S
Sbjct: 533 LKFELENTKRELEDQKNSYEQKIIQVENEKNEVIKKAYEEADNYLKEVQSKAKNLIDRIS 592
Query: 548 ADEINS-LIKESESAIAAIVEAHRPDDDFSVSETN--TSSFTPQFGEQVHVKSLGDKLAT 604
DEI K ++ ++ + E+ D +V E + Q GE+V VK+L
Sbjct: 593 QDEIKKEEAKNAQRSLNMLRESFIADKKQNVKERKIVARNIDIQEGEEVLVKTLNQN-GK 651
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + D + V VQ G +++ V +NI I K+ N L+ Q
Sbjct: 652 VLRIIPDTNNVQVQAGILKLVVSLDNIVKIQ-KKKTNRFKSFASLKSTQ----------- 699
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ +DLRG +EA +L++ L A +++IHG GT +++++
Sbjct: 700 ------------VRGEIDLRGKNADEAIAELEVYLDRAMLTGYHEVYIIHGKGTMILRKK 747
Query: 723 VLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ E L+ V +++ ++ GCTVA +K
Sbjct: 748 IQEFLKTSKYVTEFKDANQNEGGIGCTVATLK 779
>gi|227501366|ref|ZP_03931415.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus tetradius ATCC 35098]
gi|227216465|gb|EEI81875.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus tetradius ATCC 35098]
Length = 781
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 209/726 (28%), Positives = 349/726 (48%), Gaps = 110/726 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L IR +++R ++ + L A + +++ R R V +K +
Sbjct: 141 ISDNASATLRNIRRQKQRKEGDIRNKLNSYITNSKYADALQDNVVSVRDGRYVVPVKTNK 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKS 161
+ ++ GI + S+SG T F+EP VE NN +L + EI EE I +L + IA++
Sbjct: 201 RAVIG-GIVHDKSASGNTLFIEPAAIVELNN---QLRDLEIKEEDEIRKILDRLSRIAQA 256
Query: 162 EREIKYLMDRVL--EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+++ L ++ L ID A+A FA + PI+S + + + +HPLL G
Sbjct: 257 -FDVELLENQKLIARIDFLQAKARFALENEYSLPIISDEKILDLKEA------RHPLLTG 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
VPI++++ + R ++ITGPNTG
Sbjct: 310 RV------------------------------------VPINVRIGGDYRTLIITGPNTG 333
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL S M++ GL++PA +L FD I DIGD QS+E +LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLISAMAQTGLFIPAMEGSKLCIFDDIFLDIGDTQSIEMSLSTFSASLTNI 393
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I++ +++SLVL+DEIGSGTDP EG ALA SIL +L ++ + TTHY++L +
Sbjct: 394 VKIIKEATKDSLVLLDEIGSGTDPVEGAALAISILDFLTEKNVMTFATTHYSELKYYAVE 453
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV-ERLRPE 458
NA+ EF +++L PTY++ G+ G SNA I+K +G +I+++A+ L+ E R
Sbjct: 454 TEAVMNASVEFDVDSLSPTYKLEIGTPGKSNAFEISKRLGLPLQILKKAKSLIGEDTRNI 513
Query: 459 RQQHRKSELYQSLMEER-RKLESQARTAASLHAEIM-----------DLYREIEDEAKDL 506
+ + E+ + +E++ R+++ + +S+ E+ D+ RE ED+A +
Sbjct: 514 NKILAEIEIDKKKIEDKNRQIDEYKKEISSIRNELKEKSKKLDKKEEDIIREAEDKANAI 573
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
+A + ++ ++ N ID + N+ ++ + + +K S A
Sbjct: 574 LDKANKKSQEMLKEAKKSRNANTSDIDRSLNKIRNKYKEGRIEREGAYLKTKLSKNA--- 630
Query: 567 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
PD + G+ V + L +K A V+ +P + + VQ G +++
Sbjct: 631 ----PD-------------KLKLGDFVLIAGLNEK-AEVIGLPDKNGNIKVQMGILKM-- 670
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
+NI+ + K N Q ++ ++ + P SLDLRG
Sbjct: 671 -DSNIKNVTKIKGDN-----------QTEKNITKVYNTKKAMHISP-------SLDLRGQ 711
Query: 687 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPM 742
R +EA LD L A S +IHG GTG + + V EIL R+ ++ +
Sbjct: 712 RYDEAMRNLDKYLDDAMLAGLSKAKIIHGKGTGALIKGVGEILEGDKRIQDFRFGDDKEG 771
Query: 743 NYGCTV 748
YG T+
Sbjct: 772 GYGVTI 777
>gi|423411664|ref|ZP_17388784.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|423432549|ref|ZP_17409553.1| MutS2 protein [Bacillus cereus BAG4O-1]
gi|401104989|gb|EJQ12957.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|401115682|gb|EJQ23529.1| MutS2 protein [Bacillus cereus BAG4O-1]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 221/758 (29%), Positives = 360/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I K Q E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPK-------------QTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYYVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423660606|ref|ZP_17635775.1| MutS2 protein [Bacillus cereus VDM022]
gi|401302514|gb|EJS08093.1| MutS2 protein [Bacillus cereus VDM022]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 223/740 (30%), Positives = 356/740 (48%), Gaps = 106/740 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S + S LDLRG R E+A +++ L A S + +IHG GT
Sbjct: 698 ASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKTY 768
>gi|417899642|ref|ZP_12543544.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
gi|341844570|gb|EGS85782.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
Length = 688
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 325/641 (50%), Gaps = 82/641 (12%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
K V+E+ D++ + VQ G +++++ I + +KRK
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKLP---IEDLEKNKRK 687
>gi|418010214|ref|ZP_12649997.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
gi|410554421|gb|EKQ28397.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
Length = 786
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 210/685 (30%), Positives = 333/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +PLK VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPLK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPSVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E +D + A KA ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-RDAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|262281894|ref|ZP_06059663.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
gi|262262348|gb|EEY81045.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
Length = 777
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 339/724 (46%), Gaps = 117/724 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
ASEDL IR + + N + LL+++ + + +I R R + +K +++ +
Sbjct: 147 ASEDLGRIRRKIQENESKVRDLLQEILKN--KGDMLADQVIASRNGRNVLPVKNTYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
P G+ ++S+SG T ++EP+ V N E E IL L+A I EI
Sbjct: 205 P-GVVHDISASGTTIYIEPRAVVNLNEEISNYKADERYELLRILQELSAMIRPHATEIAN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +DL A+ F + V P LS +I + ++HPL
Sbjct: 264 NAWIIGHLDLVMAKLAFMRERGAVVPALSETQ------AIQLLQVRHPL----------- 306
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
+EN+ V D+ + +VITGPNTGGKT +KT
Sbjct: 307 -----------IENA---------------VANDLHFGPDLTEIVITGPNTGGKTIMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE V
Sbjct: 341 LGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + ENA+
Sbjct: 401 SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIEMDWVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLVERLRP 457
EF ++LRPTYR + G G SNA IA+ +G I+ AQ +++ERL
Sbjct: 461 MEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTNTDSDVNRIIERL-- 518
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
E + LES+ R +D RE+E E +R L +
Sbjct: 519 ----------------EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEF 553
Query: 518 TQQVQQELNFAKVQ----IDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAH 569
++ + ELN A+++ +D + + E+ L++ A +SL I E++S + +
Sbjct: 554 NREKETELNKARLEAQEIVDLALSESESILQNLHAK--SSLKPHEIIEAKSQLKKLAPET 611
Query: 570 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
V + P+ G+ + V S G + V ++ D Q G +++ +++
Sbjct: 612 VDLSKNKVLKQAKKHRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLIKMTLEEQ 669
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
+ K + P+ ++ +++ +AG K LDLRG R E
Sbjct: 670 EFNLLKAEKEQQ-----PKRKQVNVVKRANTAG--------------PKARLDLRGKRYE 710
Query: 690 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 747
EA +LD I A + + + +IHG+GTGV++E V + LR + V + +P N G +
Sbjct: 711 EAMKELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQNAGGS 769
Query: 748 VAYI 751
A I
Sbjct: 770 GATI 773
>gi|251780590|ref|ZP_04823510.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084905|gb|EES50795.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 785
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 189/662 (28%), Positives = 323/662 (48%), Gaps = 92/662 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L T R R + +KA +K +P G+ + SS+GAT F+EP G V NN L E AE
Sbjct: 186 LYTIRGDRYVIPVKAEYKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+LS L+ ++ + + + +D F++ +A ++ + P+ V D
Sbjct: 245 IDRVLSALSLKVKMNAEHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGI 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
NI +HPL+ D VP+D+ +
Sbjct: 299 FNIMSGRHPLIE-----------------------------------KDKVVPLDVVLGD 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
E ++ITGPNTGGKT ++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+E
Sbjct: 324 EFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV+I+E +R+SL+L DE+G GTDP+EG ALA +I++ L + +
Sbjct: 384 QSLSTFSSHLTNIVNIMEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L R ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I
Sbjct: 444 TTHYSELKAYALNKERVENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVID 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ + + E + L ++L E+ + AR A + E +L ++ E + + L
Sbjct: 504 CAKNYMSKENLEFEG-----LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERL 558
Query: 507 D--RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
+ + A++ A+E + ++ + AK + D +++ +R+ I S ++
Sbjct: 559 EKVKDKAYMDARE--EAKKIVANAKDEADEILK----AMRELEKLGIGSGGRQRLEE--- 609
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVL 616
E + D E GE + +LG ++ V+ +P + V
Sbjct: 610 --ERKKLKDSLEEKEKKLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQ 667
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
V+ G M++ VK ++R + + + E + +V+
Sbjct: 668 VEAGIMKISVKLKDLR-------------------KTKQSKVEKVKKKRELKLHFSKVE- 707
Query: 677 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
N +DLRG+ EEA +++D L A + + ++HG GTG++++ + ++L+ H V
Sbjct: 708 --NRIDLRGLDAEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVK 765
Query: 735 KY 736
Y
Sbjct: 766 NY 767
>gi|423368579|ref|ZP_17346011.1| MutS2 protein [Bacillus cereus VD142]
gi|401080105|gb|EJP88395.1| MutS2 protein [Bacillus cereus VD142]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 353/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|229135384|ref|ZP_04264173.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
gi|228648080|gb|EEL04126.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/728 (30%), Positives = 350/728 (48%), Gaps = 105/728 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
++I RA+ + + + E + E ++ ER++ E + + LH E+ E
Sbjct: 502 DRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHRELQRQIIEF 561
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKE 557
DE R LKA+ ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 562 NDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINVKDHELIEA 613
Query: 558 S---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPG 610
E A +V+ + N + P+ G++V V + G K + +V
Sbjct: 614 KSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKGQLLEKVS- 663
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 664 -DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL 709
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 ---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLK 760
Query: 729 NHPRVAKY 736
H V Y
Sbjct: 761 KHRGVKTY 768
>gi|268611992|ref|ZP_06145719.1| MutS2 family protein [Ruminococcus flavefaciens FD-1]
Length = 796
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 226/759 (29%), Positives = 356/759 (46%), Gaps = 115/759 (15%)
Query: 2 LEQECGNIFHRYSP---LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 58
+E E +F R P LLE L+ + ++E E I D AS +L IR +
Sbjct: 111 VETELSYLFTRLQPNDWLLEKLER-SIISENE-------------IADAASPELAAIRRK 156
Query: 59 RKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 114
R E LD ++K Q + + + +T R R + +K+ ++ + +G+ +
Sbjct: 157 INRAGMQLRETLDKMIKNKTTQQY----LQESNVTIRDGRFVLPVKSEYRGQV-NGLIHD 211
Query: 115 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVL 173
S++G T F+EP VE NN ++RL + EE I+ L E +
Sbjct: 212 TSATGQTLFIEPMAIVEANN-DIRLLEGKEQEEIERIIRELCRECGDYADILCENYKICT 270
Query: 174 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 233
E++L FA++ A + P ++ D + ++ +HPL+
Sbjct: 271 ELNLYFAKSNLAAKLRCTLP------EITDDGKMFLKKARHPLI---------------- 308
Query: 234 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 293
D E + VPID+ + + + ++ITGPNTGGKT S+KT GL S
Sbjct: 309 ----DREKA---------------VPIDLSLGEDYQALIITGPNTGGKTVSLKTAGLLSC 349
Query: 294 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 353
M GL +P + R+ F +LADIGD QS+EQNLSTFS H +++++IL+ SLVL
Sbjct: 350 MIMCGLLIPVADGSRISIFRHVLADIGDSQSIEQNLSTFSSHTNKVIEILKTADASSLVL 409
Query: 354 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 413
+DE+GSGTDP EG ALA +I++ L +VTTHY +L ENA+ EF +E
Sbjct: 410 LDELGSGTDPVEGAALAVAIIRRLMKSGAKIMVTTHYQELKVFAIDSENVENASCEFDIE 469
Query: 414 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 473
TLRPTYR++ GS G SNA I++S+G II+ A+ V R E+ L
Sbjct: 470 TLRPTYRLIVGSPGKSNAFAISESLGMPSDIIEEAKSGV-----SEANSRLEEVIGKLEA 524
Query: 474 ERRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKA--------KETQ 519
R +LE AA LH E + +E + AK + A L+A E+
Sbjct: 525 ARIELEKMKDDAARLHREAAEHEEKLRKEKEEIEAAKADELEKARLRAMTIIEQTKAESN 584
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
++ EL + Q D +DF + + A + S K ++A V++ P+ D+ +
Sbjct: 585 ELIDELEKLRKQKDK--KDFSSNVSGAKSKAKQSFNKMYDTANP--VDSKDPNADYVLPR 640
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+ G+ V+V LG K V P D V VQ G M+ ++ + +R + + +
Sbjct: 641 ------KLKRGDTVYVVDLGRK-GIVSGDPDGSDFVFVQMGVMKTKMAVSRLR-LEETPK 692
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 697
N + + +R+ G E + K LD+RG ++ +QLD I
Sbjct: 693 VTVGN-----KSVKPNRKMNKVGVKAE--------RRGKMELDIRGCACDDGIYQLDAFI 739
Query: 698 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
A + S + +IHG GTG++++ V L++HP V +
Sbjct: 740 DRAVMSNISTITIIHGKGTGLLRQAVHRRLKSHPSVKAF 778
>gi|423591474|ref|ZP_17567505.1| MutS2 protein [Bacillus cereus VD048]
gi|401232842|gb|EJR39340.1| MutS2 protein [Bacillus cereus VD048]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 353/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|163942283|ref|YP_001647167.1| recombination and DNA strand exchange inhibitor protein [Bacillus
weihenstephanensis KBAB4]
gi|229486366|sp|A9VJL2.1|MUTS2_BACWK RecName: Full=MutS2 protein
gi|163864480|gb|ABY45539.1| MutS2 family protein [Bacillus weihenstephanensis KBAB4]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 223/740 (30%), Positives = 356/740 (48%), Gaps = 106/740 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ ER++ E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S + S LDLRG R E+A +++ L A S + +IHG GT
Sbjct: 698 ASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKTY 768
>gi|118479701|ref|YP_896852.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis str. Al Hakam]
gi|196044939|ref|ZP_03112173.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225866525|ref|YP_002751903.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|229186805|ref|ZP_04313960.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|229198701|ref|ZP_04325400.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|376268476|ref|YP_005121188.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|423573771|ref|ZP_17549890.1| MutS2 protein [Bacillus cereus MSX-D12]
gi|189030425|sp|A0RJF2.1|MUTS2_BACAH RecName: Full=MutS2 protein
gi|254766189|sp|C1ETZ0.1|MUTS2_BACC3 RecName: Full=MutS2 protein
gi|118418926|gb|ABK87345.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
str. Al Hakam]
gi|196024427|gb|EDX63100.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225787320|gb|ACO27537.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|228584777|gb|EEK42896.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|228596542|gb|EEK54207.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|364514276|gb|AEW57675.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|401213523|gb|EJR20263.1| MutS2 protein [Bacillus cereus MSX-D12]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|228967649|ref|ZP_04128670.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402563934|ref|YP_006606658.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
gi|228792025|gb|EEM39606.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401792586|gb|AFQ18625.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 216/734 (29%), Positives = 353/734 (48%), Gaps = 94/734 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEVDIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQL- 602
Query: 550 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLAT 604
+N +K+ E A + +E P + + N + P+ G++V V + G K
Sbjct: 603 -VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVAKY 736
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKNY 768
>gi|52140954|ref|YP_085875.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus E33L]
gi|196042123|ref|ZP_03109407.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228948276|ref|ZP_04110559.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124117|ref|ZP_04253309.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|81685978|sp|Q633P2.1|MUTS2_BACCZ RecName: Full=MutS2 protein
gi|51974423|gb|AAU15973.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
gi|196027059|gb|EDX65682.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228659419|gb|EEL15067.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|228811263|gb|EEM57601.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423612727|ref|ZP_17588588.1| MutS2 protein [Bacillus cereus VD107]
gi|401244715|gb|EJR51074.1| MutS2 protein [Bacillus cereus VD107]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/745 (29%), Positives = 354/745 (47%), Gaps = 105/745 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD-LYREIE 500
++I RA+ + K E + +EE +K + R A H + + L+RE++
Sbjct: 502 DRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHRELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES 558
+ + + K ++ ++++ AK + + ++Q+ QLR A + + LI+
Sbjct: 556 RQIVEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAK 614
Query: 559 ---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGD 611
E A+ +V+ + N + P+ G++V V + G K + +V
Sbjct: 615 SRLEGAVPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKV--S 663
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
D VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 664 DTEWNVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL- 709
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 729
LDLRG R E A +++ L A S + +IHG GTG +++ V + L+
Sbjct: 710 --------ELDLRGERFENAMVRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKK 761
Query: 730 HPRVA--KYEQESPMNYGCTVAYIK 752
H V +Y G TV +K
Sbjct: 762 HRGVKNFRYGDMGEGGLGVTVVELK 786
>gi|417885123|ref|ZP_12529282.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
gi|341596419|gb|EGS39022.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
Length = 790
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 328/677 (48%), Gaps = 81/677 (11%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P++T R R + + A ++ G+ + S+SG T ++EP +E NN RL +
Sbjct: 184 LSEPIVTVRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNN---RLRQA 239
Query: 143 EIAEETAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
+I E+ +L +L +A I+ +I + +D A+A +A + P+LS+
Sbjct: 240 QIEEKQEVLRVLAELSALISPYRHDILNNEQILGHLDFINAKAIYAHELKASLPLLSA-- 297
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D+ +N+ HPL+ D V
Sbjct: 298 ----DNQVNLRKAWHPLI-----------------------------------ARDQAVA 318
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
DIK+ + + V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADI
Sbjct: 319 NDIKLGGDYQAVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADI 378
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QSLEQNLSTFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL +
Sbjct: 379 GDEQSLEQNLSTFSGHMDNVKTILDQLTANSLVLLDELGAGTDPKEGAALAMAILDEIGQ 438
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
R L ++TTHY +L + NA+ EF TL+PTYR+L G G SN L IAK +G
Sbjct: 439 RGSLVMITTHYPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLG 498
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
II AQ LV + + L+E+R++ ++ A L A+ E+
Sbjct: 499 IGPAIISEAQSLV-----SDDSQDLNAMIGDLVEQRKQAREESERLAKLVAQNQADQEEL 553
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKES 558
+ + + L + Q ++ AK + D ++ +++ + + N L+ ++
Sbjct: 554 NQKLDRFNEQRDQLLERARLQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLM-DA 612
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ A+ A+ + + SV + G+ V VKS G ++ G+ VQ
Sbjct: 613 QGALNALHQDNPRLQHNSVLKRAKEKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQ 670
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +++ + + ++ + +KR L K+++ R A + QT K
Sbjct: 671 IGILKMEIDERDLEKV--AKRD--------LPKEKQQRTGHRAVKT---------TQTRK 711
Query: 679 NS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
S LDLRG R EEA +L I A + + +IHG GTG +++ + L+++PRV
Sbjct: 712 TSARLDLRGHRYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNPRVK 771
Query: 735 KYEQESPMNYGCTVAYI 751
+ +P N G A I
Sbjct: 772 SFSYAAP-NAGGDGATI 787
>gi|161506987|ref|YP_001576941.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
gi|229486375|sp|A8YTJ4.1|MUTS2_LACH4 RecName: Full=MutS2 protein
gi|160347976|gb|ABX26650.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 785
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 213/738 (28%), Positives = 348/738 (47%), Gaps = 127/738 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + + N E++ + + + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRM-----DAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSSLAR 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQ------DHSLELRNARHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K VP DI++ + ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDYDTMLITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -ADEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 520 QVQQELNFAKVQIDTVVQDF--------------------ENQLRDASADEINSLIKESE 559
+VQ++L+FA+ + + VV EN++ +A E+NSL +++
Sbjct: 563 RVQKQLDFAQERANEVVAKRRKKADKIIAELEKQKNVGVKENKIIEAKG-ELNSLERQAH 621
Query: 560 S-AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ A +++ + SV G+QV V S G + T+ + + + VQ
Sbjct: 622 NLAHNKVLQREKRQHHVSV------------GDQVKVLSYG-QTGTITKKLSEHE-YEVQ 667
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++V+V +I I KN A P +L + A+ R +
Sbjct: 668 IGIIKVKVSDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAH 707
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVA 734
+ LDLRG R +EA LD I A ++ +IHG+GTG +++ V + LR NH +
Sbjct: 708 SELDLRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGF 767
Query: 735 KYEQESPMNYGCTVAYIK 752
Y + G T+ +K
Sbjct: 768 NYAPANEGGNGATIVKLK 785
>gi|406837044|ref|ZP_11096638.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
Length = 784
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 324/676 (47%), Gaps = 86/676 (12%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P+IT R R + +K ++ G+ + S+SG T F+EP A++ NN + +
Sbjct: 184 LTEPVITIRDDRYVIPVKQEYRGHF-GGVVHDQSASGQTLFVEPAAALDLNNRLRQRQAN 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E IL+ L+A +A +EI + E D A A+A +AQ + P +S
Sbjct: 243 EREEIQRILTALSASLAPYVKEIAANAALLGEFDFANAKAKYAQQLKATYP------RLS 296
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
D+ + + HPLL N + V + DI
Sbjct: 297 VDNQVYLRQAWHPLL-----------------------NEKKVVRN------------DI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+ + + +VITGPNTGGKT ++KTLGL LM ++GL++PA ++ F I ADIGD
Sbjct: 322 MLGQDYQTMVITGPNTGGKTITLKTLGLIQLMGQSGLFIPAFEDSQIGVFKEIFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QS+EQNLSTFS H++ IV+IL + SLVL+DE+G+GTDP EG ALA +IL L
Sbjct: 382 QSIEQNLSTFSAHLTNIVEILNNCDQSSLVLLDELGAGTDPQEGAALAVAILDALAALGS 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V TTHY +L + NA+ EF +TL+PTYR+L G G SNA I++ +G
Sbjct: 442 YVVATTHYPELKAYGYERLSTINASMEFDSQTLQPTYRLLIGIPGQSNAFAISQRLGLSA 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
+II A++L Q +++ Q L+ +R++ E + A E +L+ +++
Sbjct: 502 EIIAAARQLT-----SNQSQDLNQMIQDLVRKRQQAEEERARLAKYLTEGQELHHDLQVA 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--S 560
+++ AHL + Q ++ A + D ++ + +A+A +KE + +
Sbjct: 557 FNKFEKQKAHLLEQAKLHANQIIDQASQRSDELISELRQMKLNANAS-----VKEDQLIT 611
Query: 561 AIAAIVEAHRP---DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
A + E H+P + P G+ V VK D+ T++E G + V
Sbjct: 612 AKTKMNELHQPLLSKNRVLRKVKLNQQLKP--GDDVLVKPY-DQQGTLLEKTGKHEWE-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++++ + N+ I K R+R S+ S+ + P
Sbjct: 668 QLGSLKMKIAEGNLEKIKIKPEK------VRIR---------SSFKSSSQVHVSP----- 707
Query: 678 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
LDLRG R E A +D L A + + +IHG GTG ++E + + L+ + RV
Sbjct: 708 --VLDLRGQRYETAMTMVDRYLDSALLAGYASVTIIHGKGTGALREGIRQYLQTNRRVKS 765
Query: 736 YEQESPMNYGCTVAYI 751
+ +P N G A I
Sbjct: 766 FG-FAPANAGGDGATI 780
>gi|228917190|ref|ZP_04080747.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228935862|ref|ZP_04098672.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823630|gb|EEM69452.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228842391|gb|EEM87482.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423400603|ref|ZP_17377776.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|423457214|ref|ZP_17434011.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|423478688|ref|ZP_17455403.1| MutS2 protein [Bacillus cereus BAG6X1-1]
gi|401148991|gb|EJQ56474.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|401655327|gb|EJS72861.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|402426719|gb|EJV58834.1| MutS2 protein [Bacillus cereus BAG6X1-1]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 216/734 (29%), Positives = 353/734 (48%), Gaps = 94/734 (12%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++++ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIREL-RQLRKAQL- 602
Query: 550 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLAT 604
IN +K+ E A + +E P + + N + P+ G++V V + G K
Sbjct: 603 -IN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 722
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 723 VLEILRNHPRVAKY 736
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKNY 768
>gi|56421228|ref|YP_148546.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus kaustophilus HTA426]
gi|81675734|sp|Q5KWF8.1|MUTS2_GEOKA RecName: Full=MutS2 protein
gi|56381070|dbj|BAD76978.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 784
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 225/758 (29%), Positives = 368/758 (48%), Gaps = 90/758 (11%)
Query: 6 CGNIFHRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 60
++ + L L + + L E LE + ID + LD AS+ L +R + +
Sbjct: 106 IAGLYDEHGGLERLFRYADTLAEAPELEHDVRRSIDDHGEV-LDAASDRLRSLRGQIRSV 164
Query: 61 --RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 118
R E L+S+++ +AQ + +IT R R + +K ++ GI + S+S
Sbjct: 165 EARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRGAY-GGIVHDQSAS 219
Query: 119 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 178
GAT F+EP+ VE NN E E IL L+A++A+ + ++ + +D A
Sbjct: 220 GATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEPLARTVEALAALDFA 279
Query: 179 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 238
FA+A +A+ + P ++S+ ++ F + +HPLL D
Sbjct: 280 FAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL--------------------D 313
Query: 239 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 298
E + VP DI++ + +VITGPNTGGKT ++KT+GL +LM++AG
Sbjct: 314 QEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAG 358
Query: 299 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 358
L++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V ESLVL DE+G
Sbjct: 359 LFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHVDGESLVLFDELG 418
Query: 359 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 418
+GTDP EG ALA +IL + R V TTHY +L NA+ EF ETLRPT
Sbjct: 419 AGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNASVEFDTETLRPT 478
Query: 419 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 478
Y++L G G SNA +I++ +G D +II+RA+ V + H + SL +++
Sbjct: 479 YKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNVENMIASLERSKKQA 533
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 538
E A + E L E E + ++L+ A A+ TQ+ + A+ + + ++Q+
Sbjct: 534 EEDEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADIIRAAEREAERIIQE 593
Query: 539 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 598
++ A+ + E++ +AA A + ++ S Q G++V V SL
Sbjct: 594 LRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAKKAASRHVFQPGDEVKVTSL 650
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
K + +V DD VQ G +++++ + ++ I ++ K+ P ++ +
Sbjct: 651 NQKGYLIEKV--SDDEWQVQLGILKMKIHERDLEYIGSAPAKD-VTPIATVKGK------ 701
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
A S E LDLRG R E+A +L+ L A + + +IHG GT
Sbjct: 702 -DAHVSLE--------------LDLRGERYEDALIRLEKYLDDAVLAGYARVSIIHGKGT 746
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V ++ + + G T+ +K
Sbjct: 747 GALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 784
>gi|418953440|ref|ZP_13505433.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
gi|375375040|gb|EHS78649.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
Length = 717
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 328/649 (50%), Gaps = 85/649 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
K V+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|312870454|ref|ZP_07730574.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
gi|311094011|gb|EFQ52335.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
Length = 790
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 324/674 (48%), Gaps = 75/674 (11%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
+ +P++T R R + + A ++ G+ + S+SG T ++EP +E NN +
Sbjct: 184 LSEPIVTVRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNNHLRQAQIE 242
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E +L+ L+A I+ +I + +D A+A +A + P+LS+
Sbjct: 243 EKQEVLRVLAELSALISPYRHDILNNEQILGHLDFINAKAVYAHELKASLPLLSA----- 297
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
D+ +N+ HPL+ D V DI
Sbjct: 298 -DNQVNLRKAWHPLI-----------------------------------ARDQAVANDI 321
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
K+ + + V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADIGD
Sbjct: 322 KLGGDYQAVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADIGDE 381
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSLEQNLSTFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL + R
Sbjct: 382 QSLEQNLSTFSGHMDNVKTILDQLTANSLVLLDELGAGTDPKEGAALAMAILDEIGQRGS 441
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
L ++TTHY +L + NA+ EF TL+PTYR+L G G SN L IAK +G
Sbjct: 442 LVMITTHYPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLGIGS 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
II AQ LV + + L+E+R++ ++ A L A+ E+ +
Sbjct: 502 AIISEAQSLV-----SDDSQDLNAMIGDLVEQRKQAREESERLAKLVAQNQADQEELNQK 556
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESA 561
+ + L + Q ++ AK + D ++ +++ + + N L+ +++ A
Sbjct: 557 LDRFNEQRDQLLERARSQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLM-DAQGA 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ A+ + + SV + G+ V VKS G ++ G+ VQ G
Sbjct: 616 LNALHQDNPRLQHNSVLKRAKEKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQIGI 673
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS- 680
+++ + + ++ + SKR L K+++ R A + QT K S
Sbjct: 674 LKMEIDERDLEKV--SKRD--------LPKEKQQRTGHRAVKT---------TQTRKTSA 714
Query: 681 -LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 737
LDLRG R EEA +L I A + + +IHG GTG +++ + L+++PRV +
Sbjct: 715 RLDLRGHRYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNPRVKSFS 774
Query: 738 QESPMNYGCTVAYI 751
+P N G A I
Sbjct: 775 YAAP-NAGGDGATI 787
>gi|418873293|ref|ZP_13427600.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
gi|375366347|gb|EHS70347.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
Length = 717
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 328/649 (50%), Gaps = 85/649 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
K V+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|114566635|ref|YP_753789.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337570|gb|ABI68418.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 782
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/655 (27%), Positives = 319/655 (48%), Gaps = 81/655 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T+R R V I+ ++ + GI + S+SGAT F+EP VE NN L E E
Sbjct: 186 LVTEREGRYVVPIRQEFRHEV-RGIIHDESASGATVFIEPAAVVENNNRIRALQREEKRE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ + + EI + + E D +ARA A D P ++++ +
Sbjct: 245 VERILRKLSEAVGQYRVEIAGNQEILSEFDFIYARARLAYQGDYYRPEINARGILEISRG 304
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPLL VP+DI++
Sbjct: 305 ------RHPLL------------------------------------GQDAVPLDIRLGS 322
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ V+VITGPNTGGKT ++KT+GL +LM+ +GL++PA+ + R+ F + DIGD QS+E
Sbjct: 323 DFDVLVITGPNTGGKTVALKTVGLLTLMALSGLFIPARENSRISVFKKLFVDIGDEQSIE 382
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ I+ ILE +ESLVL+DE+G+GTDP+EG ALA IL+ L + ++
Sbjct: 383 QSLSTFSSHMTNIIAILEKADKESLVLMDEVGAGTDPAEGAALARVILEELMRKCSRVIL 442
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTH ++L + R +NA+ EF+ +L+PTY++ G G SNAL IA +G +++Q
Sbjct: 443 TTHQSELKYFAYQRERVKNASVEFNPVSLQPTYKLSIGMPGQSNALEIASRLGLKTELVQ 502
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
+A++L+ R++ + + L E + ++E + L AE+ + + +E + +
Sbjct: 503 QARQLL-----PRREMEIGNMIRHLKESQSQVEKSQQEVEKLLAELRENKQSLEQDRESF 557
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 566
++ + K + ++ L K + +T +++F+ +++ ++++ I I
Sbjct: 558 EQEKTEVMEKSRLEAERYLREIKREANTAIEEFKELMKEKEKPPKWHEVEQARQKIRQI- 616
Query: 567 EAHRP---DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+ P + D+ V+ + G+ V ++++ K VVE P + V+VQ G ++
Sbjct: 617 KVDFPGEIEKDYGVNPPKIKA-----GDYVTIRNIKQK-GYVVEGPNNQGEVVVQVGILK 670
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ V + + P ++ S + + +T +D+
Sbjct: 671 LNVNQEQLSP---------------------SQEKEEIISHRRHQGFLEKARTISKEIDV 709
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
RG E+A + +D L A + +IHG GTG ++ V L++H V Y
Sbjct: 710 RGQLAEDALYIVDKYLEDANLLGLDSVRIIHGKGTGALRTAVRHYLKDHRYVKSY 764
>gi|206901081|ref|YP_002251021.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
gi|206740184|gb|ACI19242.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
Length = 778
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 203/719 (28%), Positives = 354/719 (49%), Gaps = 97/719 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
++D AS +L+ IR +++R + + L+ + + +++ D+ +IT R R V I+
Sbjct: 139 VVDSASPELKQIRQKKERLNQKIKETLENIIQKEWRSYLQDQ-IITIRHGRYVVPIRQEF 197
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + GI + S+SG T ++EP+ VE NN L + E E IL+ LT+ + +
Sbjct: 198 RGKI-QGIVHDQSTSGLTVYVEPQVIVELNNQIALLESEEKREIERILTRLTSILLSYKE 256
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI + E+D +A+ +A+ + PIL + + I + +HP L
Sbjct: 257 EILENLRTSFELDFVYAKIKWAEKHKAITPILEKEKPL-----IILREARHPFL------ 305
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ VPI ++V +VITGPNTGGKT
Sbjct: 306 ------------------------------GEKAVPISLEVGRTFNTLVITGPNTGGKTV 335
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL L+++AG+ +PAK L F+ + ADIGD QS+EQNLSTFS H++ I+ +
Sbjct: 336 TLKTIGLFVLLNQAGIPVPAKEGTVLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFI 395
Query: 344 ELVSRES----LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ + R L+LIDE+G+GTDP EG ALA ++L+Y ++ + V+ TH+ L + K
Sbjct: 396 DYLERTGDKRVLILIDELGAGTDPQEGAALAVALLEYFHEKGTINVIATHFPQLKVIASK 455
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +L+P Y+++ G G SNA+ I+K +G RKI+ R+ L+
Sbjct: 456 YPGMENASMEFDEISLKPLYKVVMGIPGKSNAILISKRLGLPRKILDRSLSLLSE----- 510
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ + E+ L +RR+ E + L ++ + R+I++E + L++ A LKAK +
Sbjct: 511 DEIKLEEVIGELQRDRRRYEEEIEKINKLKRDLQEEKRKIQEEKEMLEKEKAQLKAKYKE 570
Query: 520 QVQQELNFAKVQIDTVVQDFENQ---LRDASA--DEINSLIKESESAIAAIVEAHRPDDD 574
++ ++++ + +I +++ + + ++DA + +E+ +L KE I E P++
Sbjct: 571 ELFRDISKVEGKIREIIRKLQEESLTMKDAQSLQEELRNLRKE-----LTIEEKREPEN- 624
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ P G++V ++S K V++V + T LVQ G +++ V
Sbjct: 625 --------LTYIPHIGDRVLLRS-TKKEGYVIDVDNEKKTALVQVGLLKINVP------- 668
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
A AP L+++ N+E PR + +R M V+E +
Sbjct: 669 -------WAELAPSLKEEISVPSYVKVERVNQEDV--PR------EISIRMMTVDEGLEE 713
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+ L A + ++HG GTG ++ V E L P V +Y +P N G A I
Sbjct: 714 VKKYLEKAFLAGLKRVRIVHGKGTGKLRNAVHEYLSKVPYVKEYYL-APPNEGGEGATI 771
>gi|302384796|ref|YP_003820618.1| MutS2 family protein [Clostridium saccharolyticum WM1]
gi|302195424|gb|ADL02995.1| MutS2 family protein [Clostridium saccharolyticum WM1]
Length = 796
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 209/673 (31%), Positives = 321/673 (47%), Gaps = 107/673 (15%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +K+ HK + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 186 VITMRDGRYCLPVKSEHKSQV-SGMVHDQSSTGSTLFIEPMAIVKLNNDLRALEIQEQKE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
+L+ L+ ++A E++ + + ++D FA+A ++ + PI +++
Sbjct: 245 IEMVLADLSNQLAPYLNELETDFEILTKLDFIFAKAALSKHYNASEPIFNTKR------I 298
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
INI+ +HPLL +P K VPI I +
Sbjct: 299 INIKDGRHPLL---------------DPSKV--------------------VPITIHLGR 323
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ ++++TGPNTGGKT S+KT+GL +LM ++GL++PA + L FD + ADIGD QS+E
Sbjct: 324 DFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDEVFADIGDEQSIE 383
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA SIL +L + +
Sbjct: 384 QSLSTFSAHMTNIVHILGQADSNSLCLFDELGAGTDPTEGAALAISILSFLHNMKCRTMA 443
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L ENA EF++ETL+PTYR+L G G SNA I++ +G II
Sbjct: 444 TTHYSELKVFALTTPGVENACCEFNVETLKPTYRLLIGVPGKSNAFAISQKLGLPDYIID 503
Query: 447 RAQKLVERLRPERQQHRKSELYQSLM----EERRKLESQARTAASLHAEIMDLYREIEDE 502
A+ +E K E ++ L+ E R +E + AS E+ L + +
Sbjct: 504 DAKTHLE---------AKDETFEDLLTHLEENRVTIEKERIQIASYKLEVEQLKTRLTQK 554
Query: 503 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 562
+ LD R H+ + ++ Q+ L AK D ++ IN L ++S +
Sbjct: 555 EERLDERRDHMIREAKEEAQRILRDAKETADQTIR------------SINKL--AADSGV 600
Query: 563 AAIVEAHRP-------DDDFSVSETNTSSFTPQFGEQVHVK--SLGDKL--------ATV 605
A +EA R D D S+S N Q G+Q+ + LGD + TV
Sbjct: 601 AKELEAQRSKLRNKLQDVDSSLSLKNEKK---QPGKQIDPRKLKLGDGVKVLSMNLNGTV 657
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+P + VQ G +R V N+ + ++ + PA ++ S + S +
Sbjct: 658 SSLPNAKGDLYVQMGILRSLV---NLSDLELLHEESVSTPAGIGSRKSGSGSSSTRMSKS 714
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 723
S P + +L GM +EA QLD L A + V+HG GTG +K V
Sbjct: 715 --FSISPEI-------NLIGMTTDEAIPQLDKYLDDAYLAHLPQVRVVHGRGTGALKNAV 765
Query: 724 LEILRNHPRVAKY 736
H + KY
Sbjct: 766 ----HKHLKKLKY 774
>gi|350267033|ref|YP_004878340.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599920|gb|AEP87708.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 785
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/741 (29%), Positives = 359/741 (48%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRIRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT + A+ E+ + + +D FA+A +A+ + PI++ V
Sbjct: 243 KEKQEIERILRVLTEQTAEHTEELFQDLHVLQTLDFIFAKARYAKAVKATKPIMNDNGFV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P V N D
Sbjct: 303 RLKKA------RHPLL----------------PPDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIGD
Sbjct: 322 IELGGDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTH 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 442 ARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 502 DHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KES 558
+ +L+ + + + QQ ++ A + + ++ + + + + + + LI K
Sbjct: 557 QIIELNSKKDKMLEEAEQQAADKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ ++ +P+ ++T F P G++V V + G K T++E G ++ VQ
Sbjct: 617 EGAVPTFEKSKKPEK----TKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ I ++ P P+ K A G S
Sbjct: 669 IGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVSL 708
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH V
Sbjct: 709 E-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G TV +K
Sbjct: 765 KSSRFGEAGEGGSGVTVVELK 785
>gi|387930060|ref|ZP_10132737.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
gi|387586878|gb|EIJ79202.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
Length = 785
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 229/748 (30%), Positives = 359/748 (47%), Gaps = 112/748 (14%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAG 81
L ELEE I ID + +LD ASE L + +R + R E L+S+++ AQ +
Sbjct: 129 LAELEEAIKHAID-ESGEVLDGASETLRSLRQQLRTKEARVRERLESMIRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ GI + SSSG T F+EP+ V+ NN
Sbjct: 188 AI----VTIRNDRFVIPVKQEYRTYY-GGIIHDQSSSGQTLFIEPQAIVQLNNDLQATRV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL L+ ++ + E++ ++ + E+D FA+A ++ + P+++++ +
Sbjct: 243 KEQQEIERILHELSQKVGEYSGELETIVLVLAELDFMFAKARYSSKIKASKPLMNNEGRI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
S + +HPL+ P+ D VP D
Sbjct: 303 SLIKA------RHPLI----------------PI-------------------DEVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+GL +LM+++GL +PA + + F + ADIGD
Sbjct: 322 ISLGKDFSTIVITGPNTGGKTVTLKTVGLCTLMAQSGLQIPALDGSEMAVFGSVYADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL V SLVL DE+G+GTDP EG ALA SIL + R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILNKVDFNSLVLFDELGAGTDPQEGAALAISILDEVYKRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G D
Sbjct: 442 AKVIATTHYPELKVYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLD 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
K+I A+ V + Q K + SL RR+ E+ A DL ++ E
Sbjct: 502 EKVINNARSYV---GADSSQVEK--MIASLESSRRQTEADLEEAN-------DLLKQAEK 549
Query: 502 EAKDLDRRA-AHLKAKET--QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 558
KDL ++ A + K++ ++ ++E + ++ +LR ++ ++ +KE
Sbjct: 550 LHKDLQKQMIAFYEYKDSLYEKAEEEARAIAEKAKKEAEEIIRELRKMRIEK-HAEVKEH 608
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV--------VEVPG 610
E ++EA R ++ + E SS +F ++ HV GD++ + VE
Sbjct: 609 E-----LIEAKRRLEE-AAPEKRASSSGNKFKDKKHVFRPGDEVKVLSFNQKGHLVERIS 662
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D + LVQ G ++++V+++++ I NS + P ++
Sbjct: 663 DSEW-LVQIGILKMKVEESDMEFI-NSPKPADTKPIATVK-------------------- 700
Query: 671 GPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 726
G S LDLRG R E+A +D AL R + +IHG GTG +++ V E
Sbjct: 701 GKDFHVSLE-LDLRGERYEDALLKVEKYIDNALLAGYPR--VSIIHGKGTGALRQGVQEY 757
Query: 727 LRNHPRVAK--YEQESPMNYGCTVAYIK 752
L NH V K + + G TV K
Sbjct: 758 LNNHRAVKKIRFGEAGEGGTGVTVVEFK 785
>gi|229163542|ref|ZP_04291492.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
gi|228619924|gb|EEK76800.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
Length = 786
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 218/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIVEFNEDRDERLLKVQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAS 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMVRVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|34762391|ref|ZP_00143393.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887973|gb|EAA25039.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 718
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 210/780 (26%), Positives = 369/780 (47%), Gaps = 152/780 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 52 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 106
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 107 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 165
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 166 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 224
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
PI++++ +S + + +HP +
Sbjct: 225 ENKCEIPIVNNKEILSLEKA------RHPFI----------------------------- 249
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 250 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 303
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 304 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 363
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 364 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 423
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 424 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 483
Query: 475 RRKLESQARTAASLHAE-----IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQ 520
R +A+ + + I Y E E ++ +A+ L K + +Q
Sbjct: 484 ARIDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQ 543
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 544 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV--- 577
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 578 ---------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 627
Query: 641 ----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
N +P ++ +DLRG V+EA ++L+
Sbjct: 628 VYNMNTHKKSP-----------------------------VRSEIDLRGKMVDEAIYELE 658
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 659 TYLDRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 718
>gi|19704902|ref|NP_602397.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|81763629|sp|Q8RIK8.1|MUTS2_FUSNN RecName: Full=MutS2 protein
gi|19712795|gb|AAL93696.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 778
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 212/777 (27%), Positives = 375/777 (48%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E++ N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLREMIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA- 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
++ C I + VS +++E +HP +
Sbjct: 284 -VENRCEIPT----VSNKEILSLEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D P+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V + I+ +
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQSGILKLEVPFDEIKIV----- 681
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
E+++ +N + + ++ +DLRG V+EA ++L+ L
Sbjct: 682 --------------EEKKEKVYNVNNHKKT------PVRSEIDLRGKMVDEAVYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKACKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|301056059|ref|YP_003794270.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
anthracis str. CI]
gi|423549710|ref|ZP_17526037.1| MutS2 protein [Bacillus cereus ISP3191]
gi|300378228|gb|ADK07132.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
anthracis str. CI]
gi|401190506|gb|EJQ97548.1| MutS2 protein [Bacillus cereus ISP3191]
Length = 786
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEIVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|422933743|ref|ZP_16966518.1| DNA mismatch repair protein MutS, partial [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339891359|gb|EGQ80350.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 797
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 213/781 (27%), Positives = 369/781 (47%), Gaps = 154/781 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 131 KYKQLRETIGNIPNLRLIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 185
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 186 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 244
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 245 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 303
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP +
Sbjct: 304 ENRCEIPTVSNREILSLEKA------RHPFI----------------------------- 328
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 329 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 382
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 383 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 442
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 443 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 502
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 503 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 562
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 563 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 621
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 622 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKINFKV-- 656
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V + I+ + K
Sbjct: 657 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEVPFDEIKIVEEKKE 705
Query: 640 K----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N P ++ +DLRG V+EA ++L
Sbjct: 706 KVYNMNTHKKTP-----------------------------VRSEIDLRGKMVDEAVYEL 736
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ L A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +
Sbjct: 737 ETYLDRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTL 796
Query: 752 K 752
K
Sbjct: 797 K 797
>gi|228923296|ref|ZP_04086584.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582763|ref|ZP_17558874.1| MutS2 protein [Bacillus cereus VD014]
gi|423634569|ref|ZP_17610222.1| MutS2 protein [Bacillus cereus VD156]
gi|228836250|gb|EEM81603.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401211578|gb|EJR18325.1| MutS2 protein [Bacillus cereus VD014]
gi|401280548|gb|EJR86468.1| MutS2 protein [Bacillus cereus VD156]
Length = 786
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 220/758 (29%), Positives = 360/758 (47%), Gaps = 108/758 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
+ L+R+++ + + DR LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRDLQRQIIEFNEDRDERLLKAQ--KEGEEKVEAAKKEAEGIIQEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSL 598
+ + LI+ E A +V+ + N + P+ G++V V +
Sbjct: 602 LANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTF 652
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
G K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 653 GQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAV 697
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
+ + S LDLRG R E A +++ L A S + +IHG GT
Sbjct: 698 ATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
G +++ V + L+ H V +Y G TV +K
Sbjct: 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|347542281|ref|YP_004856917.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985316|dbj|BAK80991.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 783
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 218/735 (29%), Positives = 349/735 (47%), Gaps = 118/735 (16%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
I D ASE+L IR E + + + +K+ ++I + + + + T R R C+ +KA
Sbjct: 141 ISDFASENLFKIRKE----LRSKTAAIKRKLSEILKTYSKYLQENIFTVRGDRYCIPVKA 196
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 197 EYKSQIQ-GIVHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDS 255
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
I + V ++ F + +A +DG+ P +S + + S+ +HPL+ S
Sbjct: 256 IDSIYLSIKIVYFLEFIFGKGNYAIEIDGIKPDISDEEDIYLISA------RHPLIDRES 309
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+ VP+++ + + ++ITGPNTGGK
Sbjct: 310 V-----------------------------------VPLNLNFMSDRKAIIITGPNTGGK 334
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KTLGL LM+ +GL++PA ++ + + I ADIGD QSLEQNLSTFS HI I++
Sbjct: 335 TVTLKTLGLMHLMAHSGLFIPAYEGSKIMFLNEIFADIGDEQSLEQNLSTFSSHIKNIIN 394
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
I V ++L+L+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 395 ITNNVKDKTLILLDEVGSGTDPEEGAALAISIIEHFINSGCKLMGTTHYSQLKTYAINSE 454
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF ++TL+PTYR+ G G SNA IA S+G + II+ A+K
Sbjct: 455 DIENASVEFDVKTLKPTYRLNVGIPGKSNAFIIADSLGMNSSIIESAKKY---------- 504
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLD----RRAAHLK 514
L + KLE+ +T E + REIE +E K L+ +R ++
Sbjct: 505 ---------LSGDTIKLENIIKTLEEKTTEAVKNNREIEILREENKILNEKLKKRIDGIE 555
Query: 515 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAHR 570
++ + ++ A I ++ + L+ ++ E+N + IK+ ESA I +
Sbjct: 556 NEKFRIIESAKEDAYKIITNAKREIDQALKMINSLEMNGIDLSSIKDLESARREI--KKK 613
Query: 571 PDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
D+ + E N S +F G +K +G + T++ P VLVQ G +++
Sbjct: 614 IDEQNKIKEEKSLKNNSEVNIEFKSGMSAFLKRIGQNV-TILGNPDSKGNVLVQAGILKL 672
Query: 625 RVKKNNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+ + + PI + + +L K +++ + R + S+DL
Sbjct: 673 TINTSELESPIK--------DKSTKLAKSKKNLK--------------LRTSSMSTSIDL 710
Query: 684 RGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 737
RGM + E LD A + +IHG GTGV+K + +LRNH V +
Sbjct: 711 RGMDALNAISEVEKYLDDAFVSGLHE--VCIIHGKGTGVLKNSINNLLRNHVHVKSHRLG 768
Query: 738 QESPMNYGCTVAYIK 752
+ G T+AY+K
Sbjct: 769 EYGEGGDGVTIAYLK 783
>gi|328956937|ref|YP_004374323.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
gi|328673261|gb|AEB29307.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
Length = 791
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 215/730 (29%), Positives = 350/730 (47%), Gaps = 114/730 (15%)
Query: 44 ILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
ILD AS L+ +R KR N LD +++ +AQ + +IT R R + +
Sbjct: 149 ILDDASPALKGVRTGIKRGENNVREKLDGIVRGKSAQY-----LSDAIITIRNDRYVIPV 203
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + SS+G T F+EP+ VE NN +L E E IL+ ++ EIA
Sbjct: 204 KQEYRSHF-GGVVHDQSSTGQTLFVEPQSVVELNNRLRQLQIEERREVDRILAEISNEIA 262
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++I M + ++D A+A +A+ + P++ ++ V S+ +HPLL
Sbjct: 263 PYSKDILNNMFLLGKLDFIGAKASYAKNVAANRPLIHEENEVKLLSA------RHPLL-- 314
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ E V + DI + E + V+ITGPNTG
Sbjct: 315 ---------------------DPETVVAN------------DILIGGENQAVIITGPNTG 341
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT +KTLGL LM +AGL +P ++ F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 342 GKTIILKTLGLLQLMGQAGLQIPVAPESQIGLFTEIFADIGDEQSIEQSLSTFSSHMTNI 401
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAVVTTHYADLSC 395
V IL+ + +SL++ DE+G+GTDP EG ALA +IL D+VG +VT+HY +L
Sbjct: 402 VSILDRMDNKSLIIFDELGAGTDPQEGAALAIAIL----DKVGAVGSYVMVTSHYPELKA 457
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
+ NA+ EF ++TL PTYR+L G G SNA I+K +G ++I A++L++
Sbjct: 458 YGYNRPQTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLSEEVIDSARQLID-- 515
Query: 456 RPERQ---------QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
E Q ++R+ +E R ++ + L + Y E E+ K
Sbjct: 516 -GESQNLNEMISDLENRRKMAETEYLEVRHYVDEAEQLHTDLQTAVQQFYAEREELMKKA 574
Query: 507 DRRAAHLKAKETQQVQQEL--NFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 563
+A L +ET++ ++ + K QI ++ E++L DA +++ L +E A
Sbjct: 575 REKANSL-VEETEETADQIIKDLRKKQIQGHYENVKEHELIDAKT-QLSGLRQEEALAKN 632
Query: 564 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 623
+++ + P G+ V V+S G K V+ D + +VQ G ++
Sbjct: 633 KVLKKAKA----------KQVMKP--GDDVMVQSFGQK--GVLMERADKNHWVVQMGMLK 678
Query: 624 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 683
+++K++++ K N R+ ++ S + P+ LDL
Sbjct: 679 MKLKESDLTLTEPEKEPN--------------RKMIASVRSESNSHVSPQ-------LDL 717
Query: 684 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 741
RG R E A +LD L A + + ++HG GTG +++ V E L+ HP + ++ +P
Sbjct: 718 RGERYENALAELDRYLDAALLANYPQVTIVHGKGTGAIRQGVTEALKRHPSIKEFHY-AP 776
Query: 742 MNYGCTVAYI 751
N G A I
Sbjct: 777 PNQGGNGATI 786
>gi|229175259|ref|ZP_04302774.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
gi|228608091|gb|EEK65398.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
Length = 786
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 215/744 (28%), Positives = 352/744 (47%), Gaps = 103/744 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREKVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVINQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++++ QLR A + + LI+
Sbjct: 557 QIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIREL-RQLRKAQLINVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVA--KYEQESPMNYGCTVAYIK 752
V +Y G TV +K
Sbjct: 763 RGVKNFRYGDMGEGGLGVTVVELK 786
>gi|237741375|ref|ZP_04571856.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
gi|229430907|gb|EEO41119.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
Length = 778
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 210/780 (26%), Positives = 369/780 (47%), Gaps = 152/780 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
PI++++ +S + + +HP +
Sbjct: 285 ENKCEIPIVNNKEILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE-----IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQ 520
R +A+ + + I Y E E ++ +A+ L K + +Q
Sbjct: 544 ARIDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQ 603
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 604 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV--- 637
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 638 ---------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687
Query: 641 ----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
N +P ++ +DLRG V+EA ++L+
Sbjct: 688 VYNMNTHKKSP-----------------------------VRSEIDLRGKMVDEAIYELE 718
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 719 TYLDRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|229099010|ref|ZP_04229945.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|229118041|ref|ZP_04247401.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|407707068|ref|YP_006830653.1| oxidoreductase, Gfo/Idh/MocA [Bacillus thuringiensis MC28]
gi|423377604|ref|ZP_17354888.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|423440711|ref|ZP_17417617.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|423463776|ref|ZP_17440544.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|423533128|ref|ZP_17509546.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|423541608|ref|ZP_17517999.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|423547839|ref|ZP_17524197.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|423622372|ref|ZP_17598150.1| MutS2 protein [Bacillus cereus VD148]
gi|228665490|gb|EEL20972.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|228684508|gb|EEL38451.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|401171141|gb|EJQ78374.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|401178276|gb|EJQ85456.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|401261512|gb|EJR67672.1| MutS2 protein [Bacillus cereus VD148]
gi|401638453|gb|EJS56203.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|402418842|gb|EJV51131.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|402421320|gb|EJV53580.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|402464361|gb|EJV96057.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|407384753|gb|AFU15254.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis MC28]
Length = 786
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 345/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 557 QIIEFNEERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|296327726|ref|ZP_06870266.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155164|gb|EFG95941.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 778
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 212/777 (27%), Positives = 375/777 (48%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E++ N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLREMIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA- 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
++ C I + VS +++E +HP +
Sbjct: 284 -VENRCEIPT----VSNKEILSLEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D P+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V + I+ +
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQSGILKLEVPFDEIKIV----- 681
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
E+++ +N + + ++ +DLRG V+EA ++L+ L
Sbjct: 682 --------------EEKKEKVYNVNNHKKT------PVRSEIDLRGKMVDEAVYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKACKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|418643039|ref|ZP_13205225.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|418649444|ref|ZP_13211472.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
gi|375016152|gb|EHS09796.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|375029817|gb|EHS23142.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
Length = 717
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 320/627 (51%), Gaps = 79/627 (12%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI D ++ + HPLL N E V
Sbjct: 289 SIKGTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 AN----------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRV 626
K V+E+ D++ + VQ G +++++
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL 676
>gi|20808111|ref|NP_623282.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter tengcongensis MB4]
gi|254479026|ref|ZP_05092382.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
gi|23821879|sp|Q8R9D0.1|MUTS2_THETN RecName: Full=MutS2 protein
gi|20516697|gb|AAM24886.1| MutS-like ATPases involved in mismatch repair, family 1
[Thermoanaerobacter tengcongensis MB4]
gi|214035022|gb|EEB75740.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
Length = 790
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 211/709 (29%), Positives = 343/709 (48%), Gaps = 101/709 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS L+ IR ++ E + S L + + + + +P+IT R+ R V +K +
Sbjct: 147 ISDEASPVLKAIRRQKASINEKIKSTLNSIIST--RQKELQEPIITMRQGRYVVPVKQEY 204
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + GI + SS+GAT F+EP V+ NN L E E IL L+ E+ K+
Sbjct: 205 RNVFK-GIIHDQSSTGATLFIEPIQVVDLNNELRELELKEQKEIERILFELSQEVKKNAE 263
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I ++ V E+D FA+A ++ + P L++ +V N++ +HPL+
Sbjct: 264 AIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYV------NLKKARHPLI------ 311
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P K VPIDI + E +VITGPNTGGKT
Sbjct: 312 ---------DPEKV--------------------VPIDIHIGREFTTLVITGPNTGGKTV 342
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+ AG+ +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 TLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSIL 402
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
+ V++ SLVL+DE+G+GTDP EG ALA SIL +L + TTHY++L K
Sbjct: 403 KKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGV 462
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE--- 458
ENA+ EF +ETLRPTYR++ G G SNA I++ +G +II+ A+ + E +R E
Sbjct: 463 ENASVEFDVETLRPTYRLIIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVI 522
Query: 459 -RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ ++ +L + E R + L E L + + K+ +A + KE
Sbjct: 523 KDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKAREI-IKE 581
Query: 518 TQQVQQEL-------NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 570
+Q +E+ + D +Q+ +++ + ++K E + I
Sbjct: 582 AKQTAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKI----- 636
Query: 571 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 630
PD + + G+ V++ L D+ V+ P V VQ G +++ V +N
Sbjct: 637 PD-------------SLKAGQTVYIVPL-DQNGIVLSPPDASGNVEVQAGILKMTVHISN 682
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA-SYGPRVQTSKNSLDLRGMRVE 689
+R +++ R NE+A S P SLD+RGM ++
Sbjct: 683 LRVKEEQEQEEVKKGYSRF--------------INEKAKSISP-------SLDVRGMTLD 721
Query: 690 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+A +++ I A + + +IHG GTGV++ + + LRN V +
Sbjct: 722 DALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSF 770
>gi|385817010|ref|YP_005853400.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus
GRL1118]
gi|327182948|gb|AEA31395.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus
GRL1118]
Length = 785
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 344/728 (47%), Gaps = 112/728 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRTKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S+ + + KL++Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLDAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 575
Q+VQ++L+FA+ + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFAQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 576 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 625
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
+I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 ASDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 744 YGCTVAYI 751
G A I
Sbjct: 774 EGGNGATI 781
>gi|58336758|ref|YP_193343.1| mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227903319|ref|ZP_04021124.1| MutS family DNA mismatch repair protein [Lactobacillus acidophilus
ATCC 4796]
gi|75507643|sp|Q5FLW2.1|MUTS2_LACAC RecName: Full=MutS2 protein
gi|58254075|gb|AAV42312.1| mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227868948|gb|EEJ76369.1| MutS family DNA mismatch repair protein [Lactobacillus acidophilus
ATCC 4796]
Length = 785
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 214/736 (29%), Positives = 351/736 (47%), Gaps = 122/736 (16%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS +L +R + N E++ + + + G K L +T R R + +
Sbjct: 145 VLDTASSELARLRHDIASNEEDIKNRMT-----TYTKGNSSKYLSEQIVTIRDDRYVIPV 199
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ IA
Sbjct: 200 KQEYRAKF-GGVVHDQSASGQTLFVEPEAVLNLNNRQQNLIAKEKQEIRNILKHLS-NIA 257
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ + + + + + +D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 258 REDIDSLNNIASALTSLDFLQAKAKLAKEMKASEPKLTK------DHSLNLRNARHPLI- 310
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
NP K VP +I++ + ++ITGPNT
Sbjct: 311 --------------NPEKV--------------------VPNNIRLGGDFDTMLITGPNT 336
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F+ I ADIGD QS+EQ+LSTFS H++
Sbjct: 337 GGKTITLKTAGLLQLMAQSGLFIPAEEDSQVGVFEQIYADIGDEQSIEQSLSTFSSHMND 396
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V+ E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 397 IIAIMKNVNSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 456
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTYR+ G G SNA IA+ +G +++ AQ+L+
Sbjct: 457 NRPRTTNASMEFDLKTLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAQELMS----- 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + + KL +Q + A + + D ++ L+++
Sbjct: 512 ---DEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYN 560
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 570
Q+VQ++L+FA+ + + ++ R AD+I N IKE++ I+EA
Sbjct: 561 QRVQKQLDFAQERANEIIAK-----RRKKADKIIEQLEQQKNVGIKENK-----IIEAKG 610
Query: 571 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 620
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 611 ELNSLERQANNLAHNKVLQREKRRHHVSIGDRVKVLSY--GQTGTITKQLSEHEYEVQMG 668
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V+V ++ I NS ++ A P +R A+ R + +
Sbjct: 669 IIKVKVSDRDVERIDNS--QSTAKPKRLVR-----------------ATSAVRRSNAHSE 709
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 736
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 737 EQESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|42518575|ref|NP_964505.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|81703880|sp|Q74KU8.1|MUTS2_LACJO RecName: Full=MutS2 protein
gi|41582860|gb|AAS08471.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 788
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 220/751 (29%), Positives = 352/751 (46%), Gaps = 98/751 (13%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 73
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-GVVHDQSASGQTLFVEPQAVLVLN 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+L+ Q HV I + +HPL+ +P K
Sbjct: 294 VLN-QDHV-----IKLRKARHPLI---------------DPKKV---------------- 316
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + LVLIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAI 432
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNEVVVDKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 542
++ D++ L R+ + QQVQ++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
V+ D VQ G ++V+V ++ I + A A R + D +S A
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKIST---QAAPKKAERAVRSSRDLRSTRAS 710
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
S LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 711 S----------------ELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKRNRHVKSYSY-APANQGGTGATI 784
>gi|256846546|ref|ZP_05552003.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
gi|256718315|gb|EEU31871.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
Length = 778
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 210/779 (26%), Positives = 367/779 (47%), Gaps = 150/779 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR ++ L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKR----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN L E E IL +T + ++ +I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKILLRITELLRNNKDDILTIGEKVMYLDILNAKSIYAN- 284
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
D C I + VS +++E +HP +
Sbjct: 285 -DNKCEIPT----VSNREILSLEKARHPFI------------------------------ 309
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 -----DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENS 364
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 365 KIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGA 424
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G
Sbjct: 425 AFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPG 484
Query: 428 DSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEER 475
+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 485 ESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEA 544
Query: 476 RKLESQARTAASLHAE-----IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQV 521
R +A+ + + I Y E E ++ +A+ L K + +Q+
Sbjct: 545 RIDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQI 604
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 581
Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 605 QKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV---- 637
Query: 582 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK- 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 638 --------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKV 688
Query: 641 ---NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
N +P ++ +DLRG V+EA ++L+
Sbjct: 689 YNMNTHKKSP-----------------------------VRSEIDLRGKMVDEAIYELET 719
Query: 698 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 720 YLDRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|410696398|gb|AFV75466.1| MutS2 family protein [Thermus oshimai JL-2]
Length = 743
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 224/678 (33%), Positives = 333/678 (49%), Gaps = 112/678 (16%)
Query: 83 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 142
I + IT RR R C+ ++A + +P GI L+ S SGAT F+EP V NN L
Sbjct: 169 IGERFITLRRERYCIPVRAGMAHKVP-GILLDESESGATLFVEPFSVVRLNNRLQSLRLQ 227
Query: 143 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 202
E E ILS LTA +A+ E + ++ + +DL A+A A+ + G+ P
Sbjct: 228 EEEEVARILSELTALLAEDE-GLSGTLEALGLLDLLQAQAALARDL-GLRP-------PR 278
Query: 203 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 262
F ++ HPL+ NP VP D+
Sbjct: 279 FGEGYALKEAFHPLI--------------QNP-----------------------VPNDL 301
Query: 263 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 322
+++ R+++I+GPN GGKTA +KTLGLA LM++AGL++ A+ L W D I ADIGD
Sbjct: 302 RLDHARRLLLISGPNMGGKTALLKTLGLAVLMAQAGLFVAAREAT-LEWPDRIFADIGDE 360
Query: 323 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 382
QSL+++LSTF+GH+ RI + LE + +SLVLIDE+GSGTDP EG ALA +IL+ L +
Sbjct: 361 QSLQESLSTFAGHLVRIKEALEGATEKSLVLIDELGSGTDPEEGAALAQAILERLLELGV 420
Query: 383 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
VTTH + L NA+ +F L+TLRPTYR+L G G S A IA+ +G
Sbjct: 421 KGAVTTHLSPLKAFAQGREGILNASMQFDLKTLRPTYRLLLGVPGRSYAFAIARRLGLPE 480
Query: 443 KIIQRAQKLV-ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++ RA+ L+ E R E +L ER+ LE+ A L AE+
Sbjct: 481 GVLARAEALLPEAGRLEGLLELLERERLALEGERKALEALKAEAERLRAELA------RK 534
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-LRDASADEINSLIKESES 560
EA + RA LKA E ++ + L + ++ + + + RDA +KE
Sbjct: 535 EALWEEERAERLKALE-REASERLKRLEAELKALRERARTEGKRDA--------LKE--- 582
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ A+ + P + S + +P V V SLG K VVE+ G++ LVQ G
Sbjct: 583 -VMALRARYLPKREPPPSPPGLAPGSP-----VEVPSLGQK-GRVVELLGEE--ALVQVG 633
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+++R+K ++P+ ++ A A LR ++E ++
Sbjct: 634 PLKLRLKTAELKPL----KEEAPPKAVTLRPKREVKE----------------------- 666
Query: 681 LDLRGMRVEEASHQLDIALACWESR----SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+DLRG+ VEEA ++D AL E+R S L ++HG GTG ++ + E LR RV +
Sbjct: 667 VDLRGLTVEEALLEVDHALE--EARALGLSTLRLLHGKGTGALRNAIREALRRDKRVESF 724
Query: 737 EQESP--MNYGCTVAYIK 752
P +G TV +K
Sbjct: 725 ADAPPNEGGHGVTVVVLK 742
>gi|268318986|ref|YP_003292642.1| MutS2 protein [Lactobacillus johnsonii FI9785]
gi|262397361|emb|CAX66375.1| MutS2 protein [Lactobacillus johnsonii FI9785]
Length = 788
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 216/751 (28%), Positives = 349/751 (46%), Gaps = 98/751 (13%)
Query: 15 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 73
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAISEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 74 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 133
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-GVVHDQSASGQTLFVEPQAVLVLN 233
Query: 134 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 193
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEIHRILIGLSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 194 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 253
+L+ D I + +HPL+ +P K
Sbjct: 294 VLN------HDHVIKLRKARHPLI---------------DPKKV---------------- 316
Query: 254 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 313
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 314 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 373
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + LVLIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAI 432
Query: 374 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 433
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 434 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNEAVVDKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 542
++ D++ L R+ + QQV+++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSITLKRQLQNGLDWYNQQVRKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
V+ D VQ G ++V+V ++ I A A R
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAAPKKAERAVR-------------- 699
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 720
+S G R + + LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 700 -----SSRGLRSTRASSELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 721 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKQNRHVKSYSY-APANQGGTGATI 784
>gi|384182359|ref|YP_005568121.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324328443|gb|ADY23703.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 357/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++++ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|402555327|ref|YP_006596598.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
gi|401796537|gb|AFQ10396.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 357/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++++ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|42783724|ref|NP_980971.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus ATCC 10987]
gi|81699646|sp|Q72ZJ0.1|MUTS2_BACC1 RecName: Full=MutS2 protein
gi|42739654|gb|AAS43579.1| MutS2 family protein [Bacillus cereus ATCC 10987]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 357/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I++A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++++ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|379020851|ref|YP_005297513.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
gi|359830160|gb|AEV78138.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
Length = 717
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 191/649 (29%), Positives = 325/649 (50%), Gaps = 85/649 (13%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLD 67
+Y L + + LT+L ++I C + D AS +L+ IR++ +R +NLD
Sbjct: 117 KYPILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLD 174
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP
Sbjct: 175 RIVKSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPS 229
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQ 186
VE NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++
Sbjct: 230 SVVEMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSR 288
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
+ G PI + V + HPLL N E V
Sbjct: 289 SIKGTKPIFKEERTVYLPKAY------HPLL-----------------------NRETVV 319
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
+ + + D V+ITGPNTGGKT ++KTLGL +M+++GL +P +
Sbjct: 320 ANTIEFMEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDG 367
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
+L F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG
Sbjct: 368 SQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEG 427
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G
Sbjct: 428 AALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVP 487
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQART 484
G SNA +I+K +G II +A+ ++ E + +S Y+ + +R +L+ +
Sbjct: 488 GRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKE 547
Query: 485 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
A +H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR
Sbjct: 548 AEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLR 599
Query: 545 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLG 599
+ + +KE E I + R DD + + ++ G++V V S G
Sbjct: 600 EQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYG 651
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 648
K V+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 652 QK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|227894663|ref|ZP_04012468.1| MutS family DNA mismatch repair protein [Lactobacillus ultunensis
DSM 16047]
gi|227863558|gb|EEJ70979.1| MutS family DNA mismatch repair protein [Lactobacillus ultunensis
DSM 16047]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 353/728 (48%), Gaps = 111/728 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + N E + + K++A + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDIASNEEEIKN---KMSA--YTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFVEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSS-LA 258
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E E + + + ++D A+A A+ M +S+ ++ D S+N+ +HPL+
Sbjct: 259 REEIESLNNIATALTKLDFLQAKAKLAKEMK------ASEPQLTHDHSLNLRNARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGDFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + M + +++A T A H E D ++ L+++
Sbjct: 512 --SDEDSDINK--MIAKLNAQTKAATTARNHLETS------LDRSEKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEA------- 568
Q+VQ++L+FA+ + + ++ R AD I L K+ + I+EA
Sbjct: 562 QRVQKQLDFAQERANEIIAK-----RRKKADRIIEQLEKQKNVGVKENKIIEAKGELNTL 616
Query: 569 HRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
R ++ + V + G+QV V S G + T+ + + + VQ G ++ +
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVNVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGIIKAK 674
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V +I I S+ +++ P +R A+ R + + LDLRG
Sbjct: 675 VSDRDIEKI--SQNNSSSKPKRLVR-----------------ATSAVRRSNAHSELDLRG 715
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R +EA LD I + +IHG+GTG +++ V + LRN V ++ +P N
Sbjct: 716 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSKHVKRFNY-APAN 774
Query: 744 YGCTVAYI 751
G A I
Sbjct: 775 EGGNGATI 782
>gi|309790426|ref|ZP_07684988.1| MutS2 family protein [Oscillochloris trichoides DG-6]
gi|308227539|gb|EFO81205.1| MutS2 family protein [Oscillochloris trichoides DG6]
Length = 809
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 222/732 (30%), Positives = 355/732 (48%), Gaps = 99/732 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS +L +R E + L L+ + + + +P+IT R R + +KASH
Sbjct: 146 VLDSASSELAHLRREIRIAFGRLQEKLQNLITSSAYSSALQEPIITVRNGRYVIPVKASH 205
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + G+ + SSSGAT ++EP +E NN + +E E IL+ L+ +A +
Sbjct: 206 RKDV-RGLVHDQSSSGATLYIEPMAVLELNNRWREMQAAEAEEVQRILAALSQLVASNAP 264
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
++ ++ + IDLA A A +A + V P + + V D+ + + +HPLL
Sbjct: 265 QLVIAVETLATIDLALAAARYACALRAVRPEIV-EIGVGADAPLFLTEARHPLL------ 317
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+P TV VP I + + R+++ITGPNTGGKT
Sbjct: 318 ---------DP---------RTV-----------VPTSIWLGGDFRLLLITGPNTGGKTV 348
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT GL +LM++AGL +PA R+P F I ADIGD QS+EQ+LSTFS H+S I+ +L
Sbjct: 349 ALKTTGLLALMAQAGLQVPASLPARIPVFGHIFADIGDEQSIEQSLSTFSSHMSNIIRVL 408
Query: 344 E---------LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
L +LVL+DE+G+GTDP EG ALA +I++ L + V TTHYA+L
Sbjct: 409 RALEEPEDWALEPPPALVLLDELGAGTDPVEGAALARAIIERLLELQVFGVATTHYAELK 468
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 454
+NA+ EF +ETL PTYR+ G G SNAL IA +G ++++RA+ +
Sbjct: 469 AFAYNTPGVQNASVEFDIETLAPTYRLSIGLPGRSNALAIASRLGLSAELVERARSTI-- 526
Query: 455 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 514
R+ + +L + ER ++ R A L A D K DR AA L+
Sbjct: 527 ---TREAAQIEDLLAGIHHEREAAAAEIRRAEELRA----------DSEKYRDRLAAELR 573
Query: 515 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL------IKESESAIA----- 563
A E Q+ + E+ A +++ +++ QLR DE S+ ++E+E +A
Sbjct: 574 AFEAQR-EAEIEAAHQELEDELREVRGQLRRLR-DEFRSVSLSRQWLEEAEQRMAEAGSQ 631
Query: 564 --AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
A++ + T P G+ V V+S+G K +V + ++ + VQ G
Sbjct: 632 AKAVMAKQAKPQPAQPAPTGPRPLQP--GDTVMVRSVGLK-GEIVSIDAEEGSAAVQCGG 688
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
R+ V + + ++ N PA R + +A S N P +
Sbjct: 689 FRMNVALREL----SREKGNPNQPAQRT-------YTPAARSVNL-----PPAHDVAMTF 732
Query: 682 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
D+RG R + + +LD I A + ++HG GTG +++ V ++L+ HP +A +
Sbjct: 733 DMRGWRAHDVADKLDRYINDAYLAGLHQVRLLHGKGTGALRQVVRDVLQGHPLIASFHSA 792
Query: 740 SPMNY--GCTVA 749
+ + G TVA
Sbjct: 793 AGRDGGDGVTVA 804
>gi|339629769|ref|YP_004721412.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|379007116|ref|YP_005256567.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
gi|339287558|gb|AEJ41669.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|361053378|gb|AEW04895.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
Length = 773
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 208/722 (28%), Positives = 333/722 (46%), Gaps = 101/722 (13%)
Query: 44 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 102
+ D AS L IR R R++E + L ++ A + +PL+T R R + ++
Sbjct: 140 VQDHASPALAHIRG-RMRDLEREILQLFDRILHAPDWAPYLQEPLVTVRFGRRVIPVRHE 198
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
++ +P G+ + SSSG T ++EP A+E N L E E IL+ L+ E+A
Sbjct: 199 YRNQVP-GVVQDFSSSGQTVYVEPLAALERQNRLSGLMQEEAEEIERILAELSREVAGVA 257
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
E+ + R+ D A + V P + +++ G HPLL
Sbjct: 258 NELSAIQTRIGWFDELVGIARYGLKTQSVIPQIGG-------DRLHLIGACHPLLTQ--- 307
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
PVPI + + + V++I+GPNTGGKT
Sbjct: 308 ----------------------------------PVPIQVDLTRDRPVLIISGPNTGGKT 333
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
++KT+GL ++M GL +PA +PWF I AD+GD QSLE NLSTFSGH++R+ +
Sbjct: 334 VALKTVGLIAVMGLTGLMVPAHEDSTIPWFRAIWADVGDQQSLEHNLSTFSGHLARLAPM 393
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
+E ++L LIDEIG+GTDP EG ALA +++++L +V++TH+ L L KD R
Sbjct: 394 MEDAGEDTLCLIDEIGAGTDPEEGAALAEAMIRHLAQSRAYSVISTHFNRLKLLAYKDDR 453
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 460
+NA EF ETL PTYR++ G G S A IA+ +GF ++ A+ L+ E + R
Sbjct: 454 IQNARVEFDPETLAPTYRLILGEPGSSYAFYIARRLGFPPALLDAAEALLPDEAVALTRA 513
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
++L+ + EE E++ R +L AE + + +A L+ E +
Sbjct: 514 LEEVNQLHHRVAEE----EARLRAERALLAEAQAAFEQ---------EQARWLEKWERDR 560
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ E + + Q+D + + F + +++ E + ++ E+ + A + +
Sbjct: 561 SRAEATW-RQQLDQLTRRFNDLMQEYRQSEAENRVRALEAIRQELRTAGQIPAPIRRARR 619
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP------I 634
T + G+ V V D + VVE+ G +T VQ G +R+++ + + P
Sbjct: 620 TTPAAPLAVGQSVRVTGFAD-VGQVVEMNG--NTATVQIGALRMKLAVSELEPAGDTALT 676
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
P R+ AA L +Q + + + +DLRGM EA
Sbjct: 677 PTRSRRTAA-----LVRQ--------------------KAEQAVIEVDLRGMTQAEALET 711
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 750
LD L A + +IHG GTGV++ V L+ PRV Y + G TVA
Sbjct: 712 LDKFLDDAVLSGAPFVRIIHGKGTGVLRRAVQHALKADPRVESYRLGEAGEGGDGVTVAT 771
Query: 751 IK 752
+K
Sbjct: 772 LK 773
>gi|228999325|ref|ZP_04158905.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
gi|229006880|ref|ZP_04164512.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228754373|gb|EEM03786.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228760522|gb|EEM09488.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 222/740 (30%), Positives = 353/740 (47%), Gaps = 106/740 (14%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ + +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVALEADTVLANVEVIANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ + +N+ +HPL+ +P
Sbjct: 291 ATKPIVNNERY------MNLRQARHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G +I RA+ + + + E + E ++ E + E + +
Sbjct: 490 NAFEISKRLGLSDHVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 ADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDK 601
+ + LI+ E A +V+ R V NT+ + G++V V + G K
Sbjct: 602 LASVKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQK 655
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+ +V D+ VQ G ++++VK++++ I N P E + +
Sbjct: 656 GQLLKKV--SDNEWNVQIGILKMKVKESDMEYI------NTPQPV-------EKKAVATV 700
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGT 716
+ S LDLRG R E A ++ D LA + S +IHG GT
Sbjct: 701 KGRDYHVSL---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGT 748
Query: 717 GVVKERVLEILRNHPRVAKY 736
G +++ V + L+ H V Y
Sbjct: 749 GALRQGVQDYLKKHRGVKNY 768
>gi|319946241|ref|ZP_08020481.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|417919657|ref|ZP_12563185.1| MutS2 family protein [Streptococcus australis ATCC 700641]
gi|319747623|gb|EFV99876.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|342832285|gb|EGU66584.1| MutS2 family protein [Streptococcus australis ATCC 700641]
Length = 778
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 221/721 (30%), Positives = 344/721 (47%), Gaps = 110/721 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
ASE L IR + N + +L+++ ++ + ++ R R + +K +++ +
Sbjct: 147 ASETLAKIRRRIQENEHQVRDILQELLKS--KSEMLADQVVASRNGRNVLPVKNTYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER---- 163
G+ ++S+SG T ++EP+ V N ++N E +L +L EI+ R
Sbjct: 205 A-GVVHDISTSGNTVYIEPRAVVNLNE---EIANHRADERFEMLRIL-EEISNLLRPHAG 259
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI+ + IDL A+ F Q G P LS+Q I + ++HPL+
Sbjct: 260 EIRNNAWLIGHIDLVRAKHRFLQDRKGTIPALSAQG------EIQLLQVRHPLI------ 307
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
+ VP DI + +VITGPNTGGKT
Sbjct: 308 -------------------------------EKAVPNDIHFGKDLTEIVITGPNTGGKTI 336
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
+KTLGLA LM+++GL + A ++ F I +DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 337 MLKTLGLAQLMAQSGLPILADTGSKVAVFTQIFSDIGDEQSIEQSLSTFSSHMTNIVSIL 396
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E V ESLVL+DE+G+GTDP EG +LA +IL+ LR R + TTHY +L +
Sbjct: 397 EQVDEESLVLLDELGAGTDPQEGASLAIAILEDLRLRGIKTMATTHYPELKAYGIETLGV 456
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
+NA+ EF ++LRPTYR + G G SNA IA+ +G I+++AQ + + +R +R
Sbjct: 457 QNASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVRQAQGMTNQ---DRDVNR 513
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
E E + LES+ R +D R++E E +R L + T++ +
Sbjct: 514 IIEKL-----EAQTLESRKR---------LDSIRDVEQENLKFNRVLKKLYNELTRERET 559
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEI-NSLIKESESAIAAIVEAHRPDDDFSVSETNT 582
ELN A+ + +V L A +D+I L +S+ I+EA S +
Sbjct: 560 ELNKARKEAQEIV-----DLALAESDQILQGLHAKSQLKPHEIIEAKSQLKKLSPETVDL 614
Query: 583 S----------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
S + P+ G+++ V S G + + ++ V KM + K+ N+
Sbjct: 615 SKNKVLKQAKKARAPKVGDEILVISYGQRGSLTKQLKDGRWEAQVGLIKMTLEEKEFNLL 674
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
K+A+ P + RQ SN GPR + LDLRG R EEA
Sbjct: 675 ----KAEKDASQP--------KKRQVHVVKRSN---VNGPRAR-----LDLRGKRYEEAM 714
Query: 693 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 750
+LD I A + + + +IHG+GTGV++E V + LR + V +E +P N G + A
Sbjct: 715 EELDSFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFEY-APQNAGGSGAT 773
Query: 751 I 751
I
Sbjct: 774 I 774
>gi|229105178|ref|ZP_04235827.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
gi|228678104|gb|EEL32332.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
Length = 786
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 345/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 REKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 557 QIIEFNEERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|49478686|ref|YP_038600.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|81696639|sp|Q6HCX6.1|MUTS2_BACHK RecName: Full=MutS2 protein
gi|49330242|gb|AAT60888.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 786
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ +Q + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNSQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|418029387|ref|ZP_12667930.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690062|gb|EHE90019.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 787
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 225/738 (30%), Positives = 344/738 (46%), Gaps = 132/738 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 162 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 217
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 218 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 277
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 278 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 337
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 338 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 397
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 398 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 457
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 518 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 555
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
K+ E +A V + Q ++V V S G + TV + G+ D
Sbjct: 622 KQ-EVNLAK----------NKVLQKEKKRHHVQVDDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 734 AKYEQESPMNYGCTVAYI 751
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|386759420|ref|YP_006232636.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
gi|384932702|gb|AFI29380.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 222/742 (29%), Positives = 364/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASEKLRGIRTQLRTLESRIRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + P+++
Sbjct: 243 KEKQEIERILRVLTEKTAEHTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPMMNDTGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
I ++ +HPLL P V N
Sbjct: 302 ------IRLKKARHPLL----------------PPDQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGGDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KE 557
+ +L+ + + + QQ ++ A + + ++ + + + + + + LI K
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAADKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
E A+ ++ +P+ ++T F P G++V V + G K T++E G ++ V
Sbjct: 616 LEGAVPTFEKSKKPEK----TKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ I ++ P P+ K A G S
Sbjct: 668 QIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVS 707
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 708 LE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G TV +K
Sbjct: 764 VKSSRFGEAGEGGSGVTVVELK 785
>gi|315037655|ref|YP_004031223.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus GRL
1112]
gi|312275788|gb|ADQ58428.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus GRL
1112]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 343/728 (47%), Gaps = 112/728 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S+ + + KL +Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLNAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 575
Q+VQ++L+F + + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFTQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 576 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 625
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
V +I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 VSDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 744 YGCTVAYI 751
G A I
Sbjct: 774 EGGNGATI 781
>gi|116494335|ref|YP_806069.1| MutS family ATPase [Lactobacillus casei ATCC 334]
gi|122264237|sp|Q03AZ5.1|MUTS2_LACC3 RecName: Full=MutS2 protein
gi|116104485|gb|ABJ69627.1| MutS family ATPase [Lactobacillus casei ATCC 334]
Length = 786
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 335/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPGVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E R A +AK+ + ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-----RDAQLQQAKD--KANTLVDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + ++ I +SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELKKIKSSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|163791552|ref|ZP_02185956.1| MutS2 family protein [Carnobacterium sp. AT7]
gi|159873188|gb|EDP67288.1| MutS2 family protein [Carnobacterium sp. AT7]
Length = 788
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 217/740 (29%), Positives = 353/740 (47%), Gaps = 134/740 (18%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+++ AS L+ IR KR E LD +++ +AQ + +IT R R + +
Sbjct: 146 VMNDASPALKGIRTGIKRGETNVREKLDGIVRGKSAQY-----LSDTIITIRNDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + SS+G T F+EP+ VE NN +L E E IL+ ++ EIA
Sbjct: 201 KQEYRSHF-GGVVHDQSSTGQTLFVEPQSVVELNNRLRQLQIEERREIDRILAEISNEIA 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++I M + ++D A+A +A+ +D P++ ++ V S+ +HPLL
Sbjct: 260 PYSKDILNNMYLLGKLDFIGAKASYAKNIDANRPMIHDENEVKLLSA------RHPLLDP 313
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
S+ V DI + E + V+ITGPNTG
Sbjct: 314 ESV-----------------------------------VANDILIGGENQAVIITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT +KTLGL LM ++GL LP ++ F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTIILKTLGLLQLMGQSGLQLPVAPDSQMGLFTEIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAVVTTHYADLSC 395
V IL+ + +SL++ DE+G+GTDP EG ALA +IL DRVG +VT+HY +L
Sbjct: 399 VSILDRIDNKSLIIFDELGAGTDPQEGAALAIAIL----DRVGAVGSYVMVTSHYPELKA 454
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
+ NA+ EF ++TL PTYR+L G G SNA I+K +G ++I A++L++
Sbjct: 455 YGYNRPQTINASMEFDIDTLSPTYRLLIGVPGRSNAFEISKRLGLSEEVIDSARQLID-- 512
Query: 456 RPERQ---------QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
E Q ++R+ +E R ++ + A L + Y E E+ K
Sbjct: 513 -GESQNLNEMISDLENRRKMAETEYLEVRHYVDEAEQLHADLQTAVQQFYAEREELLKKA 571
Query: 507 DRRAAHLKAKETQQVQQEL--NFAKVQI--------DTVVQDFENQ---LRDASADEINS 553
+A L +ET++ ++ + K QI + + D + Q LR A E N
Sbjct: 572 REKANSL-VEETEETANQIIKDLRKKQILGQYEGVKEHELIDAKTQLSGLRQEEALEKNK 630
Query: 554 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
++K++++ + +P DD V V+S G K ++ D +
Sbjct: 631 VLKKAKAK-----QVMKPGDD------------------VIVQSFGQK--GILMEKADKN 665
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
+VQ G +++++K++++ AP +++ R+ ++ S + P+
Sbjct: 666 HWVVQMGMLKMKLKESDL-----------TLTAP---EKEPSRKMIASVRSESNSHVSPQ 711
Query: 674 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 731
LDLRG R E A +LD L A + + ++HG GTG +++ V E L+ H
Sbjct: 712 -------LDLRGERYENALAELDRYLDAALLANYPQVTIVHGKGTGAIRQGVTEALKKHR 764
Query: 732 RVAKYEQESPMNYGCTVAYI 751
+ + Q +P N G A I
Sbjct: 765 SIKSF-QYAPPNQGGNGATI 783
>gi|397691555|ref|YP_006528809.1| MutS2 family protein [Melioribacter roseus P3M]
gi|395813047|gb|AFN75796.1| MutS2 family protein [Melioribacter roseus P3M]
Length = 782
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 196/701 (27%), Positives = 346/701 (49%), Gaps = 93/701 (13%)
Query: 46 DRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS L+ IR++ R++ + + ++ LLKK++ + + + T+R R+ + +KA
Sbjct: 147 DDASPALKSIRSDIREKELSLQKTVNRLLKKLSEEYL----VQEEYFTQRDGRIVLPVKA 202
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
HK + G + SS+G T ++EP +E NN + L +E E IL ++T +IA
Sbjct: 203 EHKRHVK-GFIHSESSTGQTVYIEPAEILELNNDILSLKFAEKREIEKILLVITRQIAAK 261
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI--KHPLLLG 219
+E+ + + +D FARA +A + G P +FD+ IE I +HP+LL
Sbjct: 262 SQELLDAYNIITALDTLFARAKYALEIIGSIP--------TFDNGKPIELIDARHPILL- 312
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+ L ++ VP+++K+ + +++V+TGPN G
Sbjct: 313 ---KKLGFEAT---------------------------VPLNLKI-TDQKILVLTGPNAG 341
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL LM+++G+ +P L F+ +L DIGD+QS+E +LSTFS H++ I
Sbjct: 342 GKTVALKTIGLLVLMAQSGIPIPCHPDSNLHIFEKVLVDIGDYQSIEDDLSTFSSHLTNI 401
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
ILE + +LVL+DE+G+GTDP EG A+AT IL LRD+ L V TTH+ L + ++
Sbjct: 402 KSILENANESTLVLLDEVGTGTDPVEGAAIATGILISLRDKGALVVATTHHGSLKLIANQ 461
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
+F+N + EF E L+PTYR G G S A IA IGFD K I +++ + +
Sbjct: 462 LDKFQNCSMEFDSEELKPTYRFNQGMPGSSYAFEIATRIGFDEKFIDLSKRYI-----DS 516
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ + E + ++ L +Q + + L +D+ L+++ + +
Sbjct: 517 DKTKIEEFLIDIEKKSHDLRNQIHNLELENLRLKSLANLYQDKINKLEKQKKEI----LE 572
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ Q+ N ++ +++ +R + AD+ +IK+ +S I + + + S +E
Sbjct: 573 EAHQKANILLSDVNRKIENAIKNIRQSRADK--EVIKKEKSEIETVKKKTLSYLEKSRTE 630
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
+SS+ G+ V +K + + E+ D D L+ G ++++ K +++ P S
Sbjct: 631 -ESSSYKLNVGDYVSIKGTT-SVGVLDEIDEDKDKALITIGSLKIKAKYSSLVPAKKSDF 688
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ----L 695
+ + + + + Y LD+RGMR +EA + L
Sbjct: 689 R--------------EYEKKKVITDYDHVKY---------RLDIRGMRSDEAEFEIIRFL 725
Query: 696 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
D +L R + ++HG GTG +K+ IL+ + V Y
Sbjct: 726 DDSLMYGLER--VEILHGKGTGALKQLAHSILKKYKGVKNY 764
>gi|325956140|ref|YP_004286750.1| DNA mismatch repair protein MutS2 [Lactobacillus acidophilus 30SC]
gi|325332705|gb|ADZ06613.1| DNA mismatch repair protein MutS2 [Lactobacillus acidophilus 30SC]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 343/728 (47%), Gaps = 112/728 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 99
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRTKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 160 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S+ + + KL +Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLNAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 575
Q+VQ++L+FA+ + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFAQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 576 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 625
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
+I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 ASDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 743
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 744 YGCTVAYI 751
G A I
Sbjct: 774 EGGNGATI 781
>gi|336420684|ref|ZP_08600846.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336005916|gb|EGN35959.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 791
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 309/659 (46%), Gaps = 79/659 (11%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +K+ ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ ++A+ I+ + E+D FAR A M+ P+ ++ D
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I I +HPLL + VPI + +
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A R Q +L L +R ++ + A+ E+ L E +++ +
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 560
L+ + + + ++ L AK D +++F +++ SA E+ L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618
Query: 561 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A + + +E +P + F + GE V V S+ + TV +P V VQ
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +R +V +++ I P +Q + + S P +
Sbjct: 671 GILRSQVNISDLEIIEEK---------PSYTAKQMQKTGKGKLKMGKSFSVSPEI----- 716
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A S + V+HG GTG ++ + L+ V +
Sbjct: 717 --NLLGKTVDEAVAELDKYLDNASLAHLSTVRVVHGKGTGALRSGIHSYLKRQKHVKSF 773
>gi|384176446|ref|YP_005557831.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595670|gb|AEP91857.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 222/742 (29%), Positives = 365/742 (49%), Gaps = 100/742 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 243 KEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMNDTGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
I ++ +HPLL P + V N
Sbjct: 302 ------IRLKKARHPLL----------------PPEQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KE 557
+ +L+ + + + QQ +++ A + + ++ + + + + + + LI K
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKR 615
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
E A+ ++ +P+ ++ F P G++V V + G K T++E G ++ V
Sbjct: 616 LEGAVPTFEKSKKPEK----TKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-V 667
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G ++++VK+ ++ I ++ P P+ K A G S
Sbjct: 668 QIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVS 707
Query: 678 KNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 708 LE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRS 763
Query: 733 V--AKYEQESPMNYGCTVAYIK 752
V +++ + G TV +K
Sbjct: 764 VKSSRFGEAGEGGSGVTVVELK 785
>gi|254302123|ref|ZP_04969481.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322315|gb|EDK87565.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 778
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 217/780 (27%), Positives = 366/780 (46%), Gaps = 152/780 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINLEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ +E I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKEDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
D C I + VS +++E +HP +
Sbjct: 285 --DNRCEIPT----VSNREILSLEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFVRLQEE 543
Query: 475 RRKLESQARTAA------------SLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE-TQQ 520
R +A+ S + E + E+ +A L R H K KE +Q
Sbjct: 544 ARLDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVERIQHEEKNKEDAKQ 603
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + DF
Sbjct: 604 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVDFKA--- 637
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 638 ---------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687
Query: 641 ----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
N P ++ +DLRG V+EA ++L+
Sbjct: 688 VYNVNNHKKTP-----------------------------VRSEIDLRGKMVDEAVYELE 718
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 719 TYLDRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|167760788|ref|ZP_02432915.1| hypothetical protein CLOSCI_03173 [Clostridium scindens ATCC 35704]
gi|167661675|gb|EDS05805.1| MutS2 family protein [Clostridium scindens ATCC 35704]
Length = 791
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 309/659 (46%), Gaps = 79/659 (11%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +K+ ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ ++A+ I+ + E+D FAR A M+ P+ ++ D
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I I +HPLL + VPI + +
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
+ A R Q +L L +R ++ + A+ E+ L E +++ +
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 560
L+ + + + ++ L AK D +++F +++ SA E+ L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618
Query: 561 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
A + + +E +P + F + GE V V S+ + TV +P V VQ
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +R +V +++ I P +Q + + S P +
Sbjct: 671 GILRSQVNISDLEIIEEK---------PSYTAKQMQKTGKGKLKMGKSFSVSPEI----- 716
Query: 680 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+L G V+EA +LD L A S + V+HG GTG ++ + L+ V +
Sbjct: 717 --NLLGKTVDEAVAELDKYLDDASLAHLSTVRVVHGKGTGALRSGIHSYLKRQKHVKSF 773
>gi|291295490|ref|YP_003506888.1| MutS2 family protein [Meiothermus ruber DSM 1279]
gi|290470449|gb|ADD27868.1| MutS2 family protein [Meiothermus ruber DSM 1279]
Length = 750
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 206/679 (30%), Positives = 330/679 (48%), Gaps = 107/679 (15%)
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I + +T RR R + +KASH+ LP GI L+ S S T ++EP V NN L
Sbjct: 170 AIQERFVTLRRDRYVIPVKASHQNKLP-GIVLDQSDSKLTVYLEPASVVPLNNELASLRL 228
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E AE +L L+A +A ++ E++ + + E+D+A A A A+ V P L+
Sbjct: 229 EEEAEVNRVLFELSAALA-NDPELEATLQALTELDMARAAASLAEDWGLVRPRLNR---- 283
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
D ++ +HPL+ +NP+ + D
Sbjct: 284 --DGLYRLQAARHPLI--------------ANPVSN-----------------------D 304
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + R+++ITGPN GGKTA +KTLGLA LM++ GLY+ A L + D + DIGD
Sbjct: 305 ITLTPHNRILLITGPNMGGKTALLKTLGLAVLMAQCGLYV-AAEQAELAFPDRLFVDIGD 363
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QSL+++LSTF+ H+ R+ ++LE + SL LIDE+GSGTDP EG ALA + ++ L +
Sbjct: 364 QQSLQESLSTFAAHVLRLKEVLEAATPHSLALIDELGSGTDPEEGAALAQAFVEGLLAKG 423
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
++TTH + L +NA+ F LE LRPTY+++ G+ G S AL+IA+ +GF
Sbjct: 424 VRGLITTHLSPLKAFAQDTPGVQNASMRFDLERLRPTYQLVVGAPGRSYALSIARRLGFP 483
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
R+ ++RA+ L L PE R L +L ER +L +LH + +E
Sbjct: 484 REQLERAEAL---LGPE--GGRLERLLAALEAERERL-------YTLHQKAQAQQQETAR 531
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
++L R+ A L + + +++ AK Q + +V++ + ++R S + A
Sbjct: 532 LQQELARQLAELAEHKERLIEE----AKAQAEQIVKEAQERIRQTRE---RSKTQGQGQA 584
Query: 562 IAAIVEA----HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+ +++ RP+ + S+ Q G V V G + ATVVE+ G + ++
Sbjct: 585 LQELIQLRSRYQRPE------KAAPSNPGLQVGAIVEVPEYGGQ-ATVVELRGQE--AVL 635
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +R+ V P RL+ Q + SAG +A
Sbjct: 636 QMGAVRLTV------------------PVARLQPQPAHQSKPSAGRVAHKAKI------- 670
Query: 678 KNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
L+LRG+ VEEA +D +A A + + + ++HG GTG ++ + E L+ RV
Sbjct: 671 PTELNLRGLTVEEALLAVDDYLAEAKATATTPVRLLHGKGTGALRNALRESLKRDRRVES 730
Query: 736 YEQESPM--NYGCTVAYIK 752
+ P +G TV +++
Sbjct: 731 FHDAVPYEGGHGVTVVHLR 749
>gi|315641294|ref|ZP_07896371.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
gi|315483061|gb|EFU73580.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
Length = 797
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 232/774 (29%), Positives = 369/774 (47%), Gaps = 126/774 (16%)
Query: 4 QECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 63
QE FHR L + ++ L EL +++ +D + D AS +L+ IR +R
Sbjct: 120 QELEIDFHR---LYDWVEQLVVLPELTKQMTRAVDEDGRVT-DEASPELKGIRQAIRRME 175
Query: 64 EN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 119
+N LD L++ A+ + L+T R R + +K ++ + G+ + S+SG
Sbjct: 176 QNIREALDQLVRGSHAKY-----LSDALVTMRNDRYVLPVKQEYRGIF-GGVVHDQSASG 229
Query: 120 ATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEID 176
T F+EPK VE NN RL +IAE+ ILS L+A + REI + + + D
Sbjct: 230 QTLFIEPKQIVELNN---RLRQQQIAEKNEVARILSELSALLVPHRREIAHNSYVLGQFD 286
Query: 177 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 236
+ A+A + + M + P +S D + + +HPL+
Sbjct: 287 VMNAKARYGKLMKAIVPTMS------IDREVQLLKARHPLI------------------- 321
Query: 237 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 296
+ E+ V + DI + + + +VITGPNTGGKT ++KTLGL LM++
Sbjct: 322 ----DQEVVVAN------------DIMIGKDYQAIVITGPNTGGKTITLKTLGLLQLMAQ 365
Query: 297 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 356
AGL +P + ++ F I ADIGD QS+EQNLSTFS H++ IV IL+ + +SLVL DE
Sbjct: 366 AGLPIPVEEGSQIGVFAEIFADIGDEQSIEQNLSTFSSHMTNIVSILDKIDEKSLVLFDE 425
Query: 357 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 416
+G+GTDP EG ALA +IL + + + TTHY +L + NA+ EF ++TL
Sbjct: 426 LGAGTDPQEGAALAIAILDAVGAKSSYVMATTHYPELKIYGYNRAKTINASMEFDVDTLS 485
Query: 417 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS---- 465
PTYR+L G G SNA I+K +G D II+ A+++ + + + + RK
Sbjct: 486 PTYRLLIGVPGRSNAFEISKRLGLDTTIIEEAKQIMSGESQDINEMIADLENQRKMTETE 545
Query: 466 --ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 523
EL Q L +E KL+ + A L Y+E +DE ++A L +E Q+
Sbjct: 546 YLELRQQL-QESEKLQKELTKATEL------FYQERDDELAKARKKANEL-VEEAQE--- 594
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSE 579
+ D ++++ LR + + IKE +A + H+ D V +
Sbjct: 595 -------KSDRIIKE----LRQMQLEGQATPIKEHRLIAAKTKMASLHQEDALKKNKVLK 643
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
++ + + G++V V S G + + +V + VQ G +++ + +I I
Sbjct: 644 KAKAAKSLKIGDEVRVISYGQRGELIKKV--GNHQWQVQMGILKMTIDDTDIEAI----- 696
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
AA P R R S A P+ LDLRG R EEA ++D L
Sbjct: 697 --AAPKQPTQRTVHTVR-------SQRAAHVSPQ-------LDLRGKRYEEALAEVDQYL 740
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
A + + ++HG GTG +++ ++ L+NH R K+ + +P N G A I
Sbjct: 741 DAAILANYPQVTIVHGKGTGTLRQGIVNYLKNH-RSVKHFEFAPANQGGNGATI 793
>gi|30264620|ref|NP_846997.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Ames]
gi|47530091|ref|YP_021440.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187442|ref|YP_030694.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Sterne]
gi|65321918|ref|ZP_00394877.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|165871464|ref|ZP_02216111.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167635560|ref|ZP_02393872.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|167641563|ref|ZP_02399810.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|170688257|ref|ZP_02879467.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|170708684|ref|ZP_02899122.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|177653140|ref|ZP_02935427.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190566985|ref|ZP_03019901.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227817334|ref|YP_002817343.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CDC 684]
gi|229603197|ref|YP_002868830.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A0248]
gi|254686957|ref|ZP_05150815.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CNEVA-9066]
gi|254736658|ref|ZP_05194364.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Western North America USA6153]
gi|254741696|ref|ZP_05199383.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Kruger B]
gi|254754707|ref|ZP_05206742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Vollum]
gi|254757539|ref|ZP_05209566.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Australia 94]
gi|386738447|ref|YP_006211628.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|421639161|ref|ZP_16079754.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
gi|81714920|sp|Q81L40.1|MUTS2_BACAN RecName: Full=MutS2 protein
gi|254766187|sp|C3PAE0.1|MUTS2_BACAA RecName: Full=MutS2 protein
gi|254766188|sp|C3L808.1|MUTS2_BACAC RecName: Full=MutS2 protein
gi|30259278|gb|AAP28483.1| MutS2 family protein [Bacillus anthracis str. Ames]
gi|47505239|gb|AAT33915.1| MutS2 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181369|gb|AAT56745.1| MutS2 family protein [Bacillus anthracis str. Sterne]
gi|164712761|gb|EDR18291.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167510448|gb|EDR85847.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|167528980|gb|EDR91735.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|170126364|gb|EDS95253.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|170667763|gb|EDT18516.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|172081664|gb|EDT66735.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190561976|gb|EDV15945.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002648|gb|ACP12391.1| MutS2 family protein [Bacillus anthracis str. CDC 684]
gi|229267605|gb|ACQ49242.1| MutS2 family protein [Bacillus anthracis str. A0248]
gi|384388299|gb|AFH85960.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|403393580|gb|EJY90823.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
Length = 786
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 356/756 (47%), Gaps = 104/756 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRTQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + ++T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PT+++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I +A+ + ++ + L E ++ E A +L
Sbjct: 490 NAFEISKRLGLSNRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALR 544
Query: 490 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 545 KQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLA 603
Query: 550 EI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGD 600
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 604 NVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQ 654
Query: 601 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 660
K + +V D VQ G ++++VK++N+ I KQ E + +
Sbjct: 655 KGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVAT 699
Query: 661 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 718
+ S LDLRG R E A +++ L A S + +IHG GTG
Sbjct: 700 VKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGA 750
Query: 719 VKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
+++ V + L+ H V +Y G TV +K
Sbjct: 751 LRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|421527538|ref|ZP_15974138.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
gi|402256316|gb|EJU06798.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
Length = 778
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 214/777 (27%), Positives = 371/777 (47%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVVEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ R+ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
D C I + VS +++E +HP +
Sbjct: 285 --DNRCEIPT----VSNREILSLEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + DF
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVDFKA-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ +
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIV----- 681
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
E+++ +N + + ++ +DLRG V+EA ++L+ L
Sbjct: 682 --------------EEKKEKVYNVNNHKKT------PVRSEIDLRGKMVDEAIYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|312863354|ref|ZP_07723592.1| MutS2 family protein [Streptococcus vestibularis F0396]
gi|311100890|gb|EFQ59095.1| MutS2 family protein [Streptococcus vestibularis F0396]
Length = 782
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 345/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E T IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMTRILHELSNQLRPQAAAI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIP------KISDNQTLQLLNVRHPLLVN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D+ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLHFDEDLTAIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKDIQDMV--------DTALAESDSILKTLHDKSQLKPHEVIDAKGKLKKLAPQVD 612
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKTTRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A P+ ++ + ++AS GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQAEVKQPK-------KKQINVVKKAKKASGGPRAR-----LDLRGKRY 714
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|227877596|ref|ZP_03995650.1| MutS family DNA mismatch repair protein [Lactobacillus crispatus
JV-V01]
gi|227862790|gb|EEJ70255.1| MutS family DNA mismatch repair protein [Lactobacillus crispatus
JV-V01]
Length = 785
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 215/736 (29%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EPK + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPKAVLNLNNRQQNLIAQEKQEVRNILKNLS-NLA 258
Query: 160 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLMS----- 512
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + + KL +Q + A + D ++ L+++
Sbjct: 513 ---DEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 570
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAQ-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 571 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 620
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 736
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 737 EQESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|81428007|ref|YP_395006.1| MutS family DNA mismatch repair protein [Lactobacillus sakei subsp.
sakei 23K]
gi|123564679|sp|Q38YN3.1|MUTS2_LACSS RecName: Full=MutS2 protein
gi|78609648|emb|CAI54694.1| DNA mismatch repair protein, MutS family [Lactobacillus sakei
subsp. sakei 23K]
Length = 787
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 199/678 (29%), Positives = 333/678 (49%), Gaps = 93/678 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + +K ++ G+ + S+SG T FMEP+ +E NN +L E
Sbjct: 187 PIVTIRNDRYVIPVKQEYRGQF-GGVVHDQSASGQTLFMEPQAIMELNNRLRQLQIEEQQ 245
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ I I + + ++D A+A A+ + P++++++HV
Sbjct: 246 EIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPLINAENHVDLKQ 305
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ +HPL+ + + V DI +
Sbjct: 306 A------RHPLIDATKV-----------------------------------VANDIAIG 324
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ + +V+TGPNTGGKT ++KTLGL +M+++GL++ A+ ++ F I ADIGD QS+
Sbjct: 325 ADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSDIFADIGDEQSI 384
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL-- 383
EQNLSTFS H+ I+ IL+ + SLVL+DE+G+GTDP EG ALA +IL D++G+
Sbjct: 385 EQNLSTFSAHMENIIQILKQIDDRSLVLLDELGAGTDPQEGAALAIAIL----DQIGIVG 440
Query: 384 --AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V +THY +L + NA+ EF + TL+PTYR+L G G SNA +I+ +G
Sbjct: 441 ANVVASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSNAFDISTRLGLP 500
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
I+ +A++L + E Q + + L +R+ E++ + E DL++++
Sbjct: 501 NSIVDQAKQL---MNDESQD--LNNMITDLENQRKAAETEYQALRHELTEATDLHQQLST 555
Query: 502 EAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
+ DR KAKE + + A+V+ D V+ +LRD ++ + IKE++
Sbjct: 556 AYQQFFEDRETEMTKAKE--KANAIVEKAEVKADKVI----TKLRDMQMNQ-GAQIKENQ 608
Query: 560 --SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
A A + + H+ V + T + G+ V V S G + + +V D
Sbjct: 609 LIDAKAELGQLHQETTLKKNKVLQRAKRRQTLKVGDDVLVTSYGQRGTLIRQV--DSKNW 666
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
VQ G +++++ +++ K+K + P Q+ S G+ + +A
Sbjct: 667 EVQMGIIKMKIANDDL-----EKQKVVEDNRP----QRHVTTVNSGGARHVKA------- 710
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R EEA ++D I A + + ++HG GTG +++ V E L+ + +V
Sbjct: 711 ----QLDLRGKRYEEAMAEVDQYIDAALLANYQQVTIVHGKGTGAIRQGVQEYLQANRQV 766
Query: 734 AKYEQESPMNYGCTVAYI 751
KYE +P N G A I
Sbjct: 767 KKYEY-APANAGGNGATI 783
>gi|256849050|ref|ZP_05554483.1| mismatch repair protein [Lactobacillus crispatus MV-1A-US]
gi|262047532|ref|ZP_06020487.1| mismatch repair protein [Lactobacillus crispatus MV-3A-US]
gi|256713826|gb|EEU28814.1| mismatch repair protein [Lactobacillus crispatus MV-1A-US]
gi|260572108|gb|EEX28673.1| mismatch repair protein [Lactobacillus crispatus MV-3A-US]
Length = 785
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 215/736 (29%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EPK + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPKAVLNLNNRQQNLIAQEKQEVRNILKNLS-NLA 258
Query: 160 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 570
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAK-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 571 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 620
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 736
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 737 EQESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|409351617|ref|ZP_11234250.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
gi|407876643|emb|CCK86308.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
Length = 788
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 219/733 (29%), Positives = 344/733 (46%), Gaps = 122/733 (16%)
Query: 44 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS L +R +R N E +++ + +Q + + ++T R R + +
Sbjct: 149 VLDTASAALASLRHDRLANETEIKEKMNAYTRGKMSQY-----LSEAVVTIRDDRYVIPV 203
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++Y G+ + S+SG T F+EP+ + NN L E E IL L+
Sbjct: 204 KQEYRYKFG-GVVHDQSASGQTLFVEPEAILVLNNRLQNLLAEERQEIHRILHELSLAAG 262
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I+ + + ++D A+A A+ M +SQ ++ D S+ + +HPL+
Sbjct: 263 EEWEAIQLVAGALSQLDFLSAKAKLAKKMR------ASQPAITTDQSVKLLAARHPLI-- 314
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K V DI + + V+ITGPNTG
Sbjct: 315 -------------DPKKV--------------------VANDICLGQDFDTVLITGPNTG 341
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KTLGL SLM+++GL++PA ++ FD I ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 342 GKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDI 401
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I++ V+ +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 402 VAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISILDFFRKKQAKIMVTTHYPELKLYGYS 461
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+ +
Sbjct: 462 RERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSDI 521
Query: 460 QQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKDL-DRRAAH 512
H EL + E R+KL+S A +L ++ +D+Y + + D RA
Sbjct: 522 -NHMIDELNKQTKLATENRQKLQSSLDRAKNLEKQLRDALDIYNQRAQKQLDFAQERANE 580
Query: 513 LKAKETQQVQQELNFAKVQIDTVVQDF-----------ENQLRDASADEINSLIK-ESES 560
+ AK+ ++ D ++ D ENQL DA E N L K E+
Sbjct: 581 IVAKKRKKA-----------DKIIADLEEARKNGANIKENQLMDAKG-EFNQLAKQEANL 628
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
A +++ + +V G++V V S G + TV + GD + V G
Sbjct: 629 AKNKVLQKEKKRHHVAV------------GDKVKVLSYG-QTGTVTKKLGDHEYE-VALG 674
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
+++++V +I + S G A+ R +++
Sbjct: 675 RIKLKVSDRDIDKLAAS----------------------GDGRGKVRATSASRSSRARSQ 712
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 738
LDLRG R EEA LD S + ++HG+GTG +++ V + L+ + V +
Sbjct: 713 LDLRGQRYEEAMINLDRYFDTILLSGLSTVTIVHGIGTGAIRQGVQQYLKRNKHVKSFAY 772
Query: 739 ESPMNYGCTVAYI 751
+P N G T A I
Sbjct: 773 -APANEGGTGATI 784
>gi|395242020|ref|ZP_10419020.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480768|emb|CCI85260.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 786
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 230/787 (29%), Positives = 378/787 (48%), Gaps = 130/787 (16%)
Query: 4 QECGNIFHRYSPLLELLKNCN-FLTELEEKIGFC--------IDCKLLI----------- 43
+E GNI +L L N ++ +LEEK+ +D L +
Sbjct: 87 EELGNIL----LVLTLANEVNHYVQDLEEKMDLGPVEAILNQLDVPLTLFNELKKAFDFD 142
Query: 44 --ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 97
+LD AS +L +R + + N ++S ++ A + +A ++T R R +
Sbjct: 143 GTVLDSASSELARLRHDMRSNELEIKAKMESYVRTSAKYLSEA------IVTIRDDRYVI 196
Query: 98 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 157
+K ++ GI + S+SG T F+EP+ + NN + L E E IL L+A
Sbjct: 197 PVKQEYRGKFG-GIVHDQSASGQTLFVEPEAVLNLNNRQQNLLAQERQEIRRILKNLSA- 254
Query: 158 IAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
+A+ E E + + D + ++D A+A A+ M P LS + SI++ +HPL
Sbjct: 255 LAREEIEPLNQISDSLTKLDFIQAKAKLAKQMKATEPKLSD------NQSISLLKARHPL 308
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ +P K V DI + + ++ITGP
Sbjct: 309 I---------------DPEKV--------------------VANDIYLGNDFDTMLITGP 333
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KT GL LM+++GL++PA+ ++ F+ I ADIGD QS+EQ+LSTFS HI
Sbjct: 334 NTGGKTITLKTAGLLQLMAQSGLFIPAQEGSKVGVFNEIFADIGDEQSIEQSLSTFSSHI 393
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IV+I++ ++LVLIDEIG+GTDP EG +LA SIL YL+ R +VTTHY +L
Sbjct: 394 NDIVEIMKRAQGDTLVLIDEIGAGTDPEEGASLAISILDYLQSRNSKIMVTTHYPELKLY 453
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
R NA+ EF L++L PTYR+ G G SNA IA+ +G +++ A++L++
Sbjct: 454 GYNRPRTTNASMEFDLKSLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKSAEQLMDDTD 513
Query: 457 PERQQHRKSELYQS--LMEERRKLESQARTAASLHAEI---MDLYRE-IEDEAKDLDRRA 510
+ + + +Q+ E + KLES + L ++ +D Y + ++ + + RA
Sbjct: 514 SDINKMIEQLNFQTKKATEAKTKLESSLARSRQLEKKLQDALDWYNQRVQKQLEFAQERA 573
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES-AIAAIVEAH 569
+ AK+ ++ Q + + Q +N++ DA E+NSL KE+ + A +++
Sbjct: 574 NEVVAKKRKKADQIIKQLEEQQKNGALIKQNKIIDAKG-ELNSLEKEANNLANNKVLQRE 632
Query: 570 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 629
+ +V G+QV V S G VV + VQ G ++V+V
Sbjct: 633 KRRHHVNV------------GDQVKVLSYGQ--TGVVTKKLTEHNYEVQMGIVKVKVTDR 678
Query: 630 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 689
+I I +S + A A ++R A+ R + + LDLRG R +
Sbjct: 679 DIERIDSSNQGQKA--AKKVR-----------------ATSAVRRSNAHSELDLRGERYD 719
Query: 690 EASHQLD-----IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 744
+A LD + LA ++ + +IHG+GTG +++ V + LR+ V + +P N
Sbjct: 720 DAMTDLDRYIDSVLLAGLDT---VTIIHGIGTGAIRKGVWDYLRSSRHVKAFNY-APANE 775
Query: 745 GCTVAYI 751
G A I
Sbjct: 776 GGNGATI 782
>gi|423449119|ref|ZP_17425998.1| MutS2 protein [Bacillus cereus BAG5O-1]
gi|401128568|gb|EJQ36257.1| MutS2 protein [Bacillus cereus BAG5O-1]
Length = 786
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 344/726 (47%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLRQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
++I +A+ + ++ + L E ++ E A +L + L+RE++
Sbjct: 502 DRVIDQARNHI-----STDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES- 558
+ + + K ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 557 QIIEFNEERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEAKS 615
Query: 559 --ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + N + P+ G++V V + G K + +V D
Sbjct: 616 RLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--D 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK+ N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKEFNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKNY 768
>gi|260892446|ref|YP_003238543.1| MutS2 family protein [Ammonifex degensii KC4]
gi|260864587|gb|ACX51693.1| MutS2 family protein [Ammonifex degensii KC4]
Length = 775
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 224/759 (29%), Positives = 354/759 (46%), Gaps = 116/759 (15%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+SPL EL + L LEEK+ ++L+ D + A+ +R +++ +K+
Sbjct: 112 FSPLKELSRKLVSLPFLEEKL-----REVLLPPDDLKATASPLLAQIRRRRREVEAAIKE 166
Query: 73 VAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKG 128
+ + ++ + +PL+T R R + +K H+ + G+ + S+SGAT F+EP
Sbjct: 167 ILEEYLRSPNWQRYLQEPLVTVREGRYVLPVKVEHRDKI-KGLVHDQSASGATLFVEPWE 225
Query: 129 AVEFNNMEVRLSNSEIAEETAIL----SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
VE N RL E E+ IL SL+ E+A R +L +D A+
Sbjct: 226 VVEKGNELRRLEIQEREEKERILGELSSLVRQEVASIYRSFIFLSL----LDFVLAKGRL 281
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
A+ + V P L + + ++ ++HPLL
Sbjct: 282 AEEWEAVIPELKERPL------LRLKQVRHPLL--------------------------- 308
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
VP+D+++ + ++VITGPNTGGKT ++KT GL+ ++++AGL +PA+
Sbjct: 309 ---------GRRAVPLDLELGDKFDILVITGPNTGGKTVALKTAGLSVILTQAGLGVPAE 359
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
+ F +LADIGD QS+ +NLSTFS H+ + L ESLVL+DE+G+GTDP
Sbjct: 360 AA-EIGLFRRVLADIGDEQSVVENLSTFSAHLRNLARFLAEADEESLVLLDELGAGTDPR 418
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG AL +IL+ L R V TTH +++ R ENAA +F ET PTYR++ G
Sbjct: 419 EGAALGCAILEELARRRVKVVATTHLSEIKDFALLHPRVENAAVDFDPETFTPTYRLVLG 478
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G S A +A+ +G K++ RA+ E LRPE ++ R EL L + E +
Sbjct: 479 RPGQSLAFEMARRLGLSPKLVARAK---EYLRPEEREAR--ELATLLTRRLAEAEKEREE 533
Query: 485 AASLHAEI---MDLYR----EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 537
A L E ++ YR +++E + + +RA A +Q ++E + +++
Sbjct: 534 ARRLKEEARMSLERYRLAEARLKEEREKIIQRAREEAAALVRQARRE-------AEALLK 586
Query: 538 DFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKS 597
+ + Q R E +++ + A+ E + + +SF P G+ V V S
Sbjct: 587 ELKEQARKEQVQERERAVQKLRERLGALGERYASPLISISPSSTPASFVP--GDPVFVPS 644
Query: 598 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 657
LG + TVV V GD T VQ G ++ + +RP+ A +P
Sbjct: 645 LGRE-GTVVAVEGDSLT--VQVGAFKLELPAAAVRPV-------AKKESP---------- 684
Query: 658 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHG 713
G S A P LDLRG RVEEA S LD AL R + +IHG
Sbjct: 685 -GGVAVSTPSARARP-------VLDLRGQRVEEALENLSRYLDAALLAGLER--VTIIHG 734
Query: 714 MGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
GTG ++ V + L +HP+V + +P G V ++
Sbjct: 735 HGTGALRAAVRDYLSSHPQVKSFRLGTPEEGGAGVTVVE 773
>gi|423557869|ref|ZP_17534171.1| MutS2 protein [Bacillus cereus MC67]
gi|401192406|gb|EJQ99422.1| MutS2 protein [Bacillus cereus MC67]
Length = 786
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 218/726 (30%), Positives = 349/726 (48%), Gaps = 101/726 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 81
L +LE+KI CI ++ D AS+ L IR + R E L+++ + AQ +
Sbjct: 129 LYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSD 187
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
I +T R R + +K ++ + GI + S+SG T F+EP+ VE NN
Sbjct: 188 AI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT E+A + ++ V +D FA+A +A+ + PI++++ ++
Sbjct: 243 KEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKPIVNNERYM 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPL+ +P + VP +
Sbjct: 303 DLKQA------RHPLI---------------DP--------------------EIIVPNN 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F I ADIGD
Sbjct: 322 IMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SIL + +R
Sbjct: 382 EQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
V TTHY +L + NA+ EF + TL PTY++L G G SNA I+K +G
Sbjct: 442 ARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLS 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD-LYREIE 500
++I RA+ + K E + +EE +K + R A H + + L+RE++
Sbjct: 502 DRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQSEKLHRELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES 558
+ + + K ++ ++++ AK + + ++ + QLR A + + LI+
Sbjct: 556 RQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNVKDHELIEAK 614
Query: 559 ---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
E A +V+ + V+ NT+ P G++V V + G K + +V D
Sbjct: 615 SRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQKGQLLKKV--SD 664
Query: 613 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
VQ G ++++VK++N+ I KQ E + S + S
Sbjct: 665 TEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRDYHVSL-- 709
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
LDLRG R E+A +++ L A S + +IHG GTG +++ V + L+ H
Sbjct: 710 -------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKH 762
Query: 731 PRVAKY 736
V Y
Sbjct: 763 RGVKTY 768
>gi|322516027|ref|ZP_08068964.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
gi|322125442|gb|EFX96788.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
Length = 791
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 345/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 156 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 211
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E T IL L+ ++ I
Sbjct: 212 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMTRILHELSNQLRPQAAAI 270
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 271 ANNAWILGHMDFIRGKYLYLQDKKAVIP------KISDNQTLQLLNVRHPLLVN------ 318
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D+ + + +VITGPNTGGKT +
Sbjct: 319 -------------------------------PVANDLHFDEDLTAIVITGPNTGGKTVML 347
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 348 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 407
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 408 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 467
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 468 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 518
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 519 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 569
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ I +V D + E +S++K +S+ +++A P D
Sbjct: 570 LEKAQKDIQDMV--------DTALAESDSILKTLHDKSQLKPHEVIDAKGKLKKLAPQVD 621
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 622 LSKNKVLRKAKKEKTTRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 679
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A P+ ++ + ++AS GPR + LDLRG R
Sbjct: 680 DEFTLV----RAQAEVKQPK-------KKQINVVKKAKKASGGPRAR-----LDLRGKRY 723
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 724 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 783
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 784 GCTIATL 790
>gi|374307825|ref|YP_005054256.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
gi|320120381|gb|EFE28209.2| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
Length = 786
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 333/699 (47%), Gaps = 82/699 (11%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 103
D AS L IR R+M ++ ++K I + G + ++T R+ R V +K +
Sbjct: 145 DSASGTLRQIR----RSMSSMKESIRKKLDSIVTSSGQYLQDGIVTMRQDRFVVPVKLEN 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K+ +P GI + S+SGAT F+EP VE NN L N E E IL + A
Sbjct: 201 KHKVP-GIVHDTSASGATLFVEPMVIVEMNNKLQTLKNEEHQEIQRILKEFSDRAALIAD 259
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI+ + E+D FA+ + M + +F I ++ +HPL+
Sbjct: 260 EIRVNETNLTELDFIFAKGKLSISMK------AEAVEYNFVMEIRLKQARHPLI------ 307
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP--VPIDIKVECETRVVVITGPNTGGK 281
DF VP DI + + ++ITGPNTGGK
Sbjct: 308 -------------------------------DFKKVVPSDILIGKGYKTLMITGPNTGGK 336
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT+GL +LM ++GL+LP + F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 337 TVTLKTMGLFALMYQSGLHLPCDYGSSMCIFENIFADIGDEQSIEQSLSTFSSHMTHIVS 396
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
IL ++ LVL DE+G+GTDP EG ALA SIL+ ++ R + + TTHY++L +
Sbjct: 397 ILNSATKNCLVLFDELGAGTDPIEGAALAISILEEIKSRDCICIATTHYSELKHYALTED 456
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 459
ENA+ EF+++TL PTYR++ G G SNA I++ +G + +I+ A+ + ++L E
Sbjct: 457 GVENASMEFNIDTLSPTYRLMIGLPGKSNAFEISQRLGLQQHVIEMAKSRIHTDKLAMED 516
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
E + + ERR+ E + A L E M + D+ D R K Q
Sbjct: 517 MLKEIEEEKKKIEYERRESE-RIYAEAQLIEEKMQMKL---DKINDRKEREIQEGKKLAQ 572
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
++ ++ AK +ID +++ N + +++N ++++ I ++ +++ S+
Sbjct: 573 EIVKK---AKEEIDEQIKEVLNLKQQLDREDLNKELEKARKKIKNTMKGLAYEENILYSK 629
Query: 580 TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 637
+ Q G++V V + + V+E VQ G M++ + ++ S
Sbjct: 630 EDKEKSLNQIEKGDRVFVSTFHQE-GVVLESDDKKREAFVQLGAMKMNLPYEVLQKPKKS 688
Query: 638 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 697
K+ D Q AG + S + + LDL R+E + D+
Sbjct: 689 KK---------------DSQYSGAGKILKHKSKNIKTEIDLRGLDLETARIELEKYLDDV 733
Query: 698 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
L+ S + +IHG+GT V+K+ V EIL+++ V Y
Sbjct: 734 VLSGL---SQVTIIHGLGTFVLKKGVEEILKHYAPVKSY 769
>gi|90962080|ref|YP_535996.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227891101|ref|ZP_04008906.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
gi|122448818|sp|Q1WT38.1|MUTS2_LACS1 RecName: Full=MutS2 protein
gi|90821274|gb|ABD99913.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227866975|gb|EEJ74396.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
Length = 786
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 318/674 (47%), Gaps = 83/674 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------DMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
I+ A++L + +E+ L+ +R E + E +L+ ++E
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLETNF 557
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAI 562
+R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 558 HQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVN 617
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
A E + + P + V V S G + V+ + VQ G +
Sbjct: 618 ALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQLGIL 673
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
++++ ++++ I K + +++G+ S+ + P +LD
Sbjct: 674 KMKIDESDLEKIK--------------VKDTQPKRAGAVLKSSSSSHVSP-------TLD 712
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES 740
LRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +E S
Sbjct: 713 LRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNFEFAS 772
Query: 741 PMN--YGCTVAYIK 752
P N G TV Y K
Sbjct: 773 PNNGGNGATVVYFK 786
>gi|375090529|ref|ZP_09736843.1| MutS2 family protein [Facklamia languida CCUG 37842]
gi|374565290|gb|EHR36561.1| MutS2 family protein [Facklamia languida CCUG 37842]
Length = 786
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 221/712 (31%), Positives = 333/712 (46%), Gaps = 123/712 (17%)
Query: 66 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 125
L+ LL+ A+Q+ A LIT R R + +KA + G + SS+G T ++E
Sbjct: 173 LNQLLRSKASQLSDA------LITIRNDRFVLPVKAEFRGQF-GGTVHDQSSTGQTLYVE 225
Query: 126 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 185
P+ V NN L+ E AE IL L+ + EI+ + ++D A+A +A
Sbjct: 226 PQAVVALNNKLADLAAQEKAEIERILEELSMALVPYVSEIRQNERMIAQLDFIQAKAAYA 285
Query: 186 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 245
+ P S D I + +HPL+ +P
Sbjct: 286 KANQATKPSFSE------DQQIALWQARHPLI---------------DP----------- 313
Query: 246 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 305
D V DI + +++VITGPNTGGKT +KTLGL +M ++GL++P +
Sbjct: 314 ---------DKIVANDILIGDSYQLLVITGPNTGGKTIILKTLGLVQVMGQSGLFVPCEA 364
Query: 306 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 365
+L F+ I ADIGD QS+EQ+LSTFS H++ IV I+E SLVL DE+GSGTDP E
Sbjct: 365 GSQLGVFEGIYADIGDEQSIEQSLSTFSSHMTNIVKIIEASHESSLVLFDELGSGTDPQE 424
Query: 366 GVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
G ALA +IL YLR +VG V+ TTHY +L + + NA+ EF E+L PTYR+L G
Sbjct: 425 GAALAMAILDYLR-KVGATVMATTHYPELKVYAHETPKTVNASMEFDSESLSPTYRLLIG 483
Query: 425 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 484
G SNA +I+K +G I+ A++ + S+ QSL E KLE + R
Sbjct: 484 VPGRSNAFDISKRLGLREDILADARQGI------------SKESQSLNEMVAKLERERRQ 531
Query: 485 AASLHAEIMDLYREIEDEAKDLDR-------RAAHLKAKETQQVQQELNFAKVQIDTVVQ 537
+ HA ++ E KDL + L K +Q +++ A+ + + ++Q
Sbjct: 532 SELKHASAVEFLNRSEQLLKDLRTEYNRYLDQKEDLMEKAKRQANEKVAEAQKEAEKLLQ 591
Query: 538 DFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ-------- 588
+ + QL N IKE +++ + D +E + +
Sbjct: 592 EIRDLQLVQGQ----NQTIKEH-----VLIDKKQAFDQLKEAENLKKNKVLKKAKKAQGF 642
Query: 589 -FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK---NNIRPIPNSKRKNAAN 644
G+QV V S + V +V ++ LVQ G ++++ N I P+ +SK
Sbjct: 643 AVGDQVEVLSYQQRGVVVEQVAKNE--YLVQMGILKMKFPAEELNAIAPVQSSKH----- 695
Query: 645 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 702
R+ Q R++GS S+ SLDLRG R + A L L A
Sbjct: 696 ---RVNVQ---RRAGSKVST---------------SLDLRGQRYDAAMQGLTQYLDQALL 734
Query: 703 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 752
+ ++ +IHG GTG +++ V + L +HP+V YE +P G TV Y K
Sbjct: 735 SNHPMVTIIHGKGTGALRKGVQKKLESHPQVDHYEFSAPNAGGDGSTVVYFK 786
>gi|157150407|ref|YP_001449579.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
gi|229486382|sp|A8AUW9.1|MUTS2_STRGC RecName: Full=MutS2 protein
gi|157075201|gb|ABV09884.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
Length = 777
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 344/715 (48%), Gaps = 99/715 (13%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
ASE+L IR + + N + LL+++ + + ++ R R + +K +++ +
Sbjct: 147 ASEELGRIRRKIQENESKVRDLLQEILKN--KGDMLADQVVASRNGRNVLPVKNTYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
P G+ ++S+SG T ++EP+ V N E E IL L+A I EI
Sbjct: 205 P-GVVHDISASGTTIYIEPRAVVNLNEEISNYKADERYELLRILQELSAMIRPHAAEIAN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +DL A+ F + V P +S +I + ++HPL
Sbjct: 264 NAWIIGHLDLVMAKLAFMRERGAVVPAISDTQ------AIQLLQVRHPL----------- 306
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
++N+ V D+ + +VITGPNTGGKT +KT
Sbjct: 307 -----------IQNA---------------VANDLHFGPDLTEIVITGPNTGGKTIMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE V
Sbjct: 341 LGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + ENA+
Sbjct: 401 SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 467
EF ++LRPTYR + G G SNA IA+ +G I+ AQ+ Q + S++
Sbjct: 461 MEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVSHAQE---------QTNTDSDV 511
Query: 468 YQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 526
Q + E + LES+ R +D RE+E E +R L + ++ + ELN
Sbjct: 512 NQIIERLEEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEFNREKETELN 562
Query: 527 FAKVQ----IDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAHRPDDDFSVS 578
A+++ +D + + E+ L++ A +SL I E+++ + + V
Sbjct: 563 KARLEAQEIVDLALSESESILKNLHAK--SSLKPHEIIEAKAQLKKLAPETVDLSKNKVL 620
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 638
+ + P+ G+ + V S G + T+V++ D Q G +++ +++ + K
Sbjct: 621 KQAKKNRAPKVGDDILVTSYGQR-GTLVKLL-KDGRWEAQVGLIKMTLEEQEFNLLKAEK 678
Query: 639 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 696
+Q + +Q +N + GPR + LDLRG R EEA +LD
Sbjct: 679 -----------EQQPKRKQVNVVKRAN---TAGPRAR-----LDLRGKRYEEAMKELDEF 719
Query: 697 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
I A + + + +IHG+GTGV++E V + LR + V + +P N G + A I
Sbjct: 720 IDQALLNNMAQVDIIHGIGTGVIREGVNKYLRRNKHVKSFGY-APQNAGGSGATI 773
>gi|221632685|ref|YP_002521906.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
gi|254766609|sp|B9KYW4.1|MUTS2_THERP RecName: Full=MutS2 protein
gi|221157216|gb|ACM06343.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
Length = 792
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 231/741 (31%), Positives = 343/741 (46%), Gaps = 127/741 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+LD AS +L IR K E L L+++ A+ +A I +T R R + ++A
Sbjct: 146 VLDTASPELAAIRRSLKEAHERLLERLRRLLAERQEA--IQDAYVTIRDGRYVIPVRADR 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ +P GI +VS SG T F+EP +E NN L +E E IL +LT IA +
Sbjct: 204 RQAVP-GITHDVSGSGQTLFVEPFEVLELNNRWRELQAAETREIERILRVLTQRIADAAD 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLL 218
E+ +++ +DLA A+A A +D V P L S + + + +HPLL
Sbjct: 263 ELLQIVEAGAALDLALAKARLAYDLDAVEPELLEPSGPTVPEGHPFLRVRLRAARHPLL- 321
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
D + VPID+++ R++VITGPNT
Sbjct: 322 -------------------DRRTA---------------VPIDVELGERFRILVITGPNT 347
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT+GL +LM++AGL++PA L F I DIGD QS+EQNLSTFS H+ R
Sbjct: 348 GGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRR 407
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV L+ SLVL+DEI +GTDP EG ALA +IL+ L + L +VTTHY +L
Sbjct: 408 IVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERLLEIGALGIVTTHYPELKVFAT 467
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL------- 451
ENA+ EF TL PTYR+L G G S+AL +A+ +G +I RA++L
Sbjct: 468 GTPGLENASVEFDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLGSGAPQ 527
Query: 452 VERLRPERQQHRKSELYQSLMEERRKLESQ----------ARTAASLHAEIMDLYREIED 501
++RL E Q+ + + ER + E++ A ++ RE+E
Sbjct: 528 LDRLIAEMQRRLEEAESLAAAAERSRREAEQLRAAAERLLAEAERERREARQEVLRELEA 587
Query: 502 E---AKDLDR---RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 555
E A++L R RAA A +V Q+ A ++ VQ Q R EI
Sbjct: 588 ELARARELARKIERAARSPAYPPIEVTQDSLRALEEVKRRVQSSGRQSRQERVPEIA--- 644
Query: 556 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 615
G++V + +LG + VV + + + V
Sbjct: 645 ---------------------------------VGDRVELTALGLE-GDVVAIHPESEEV 670
Query: 616 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V+ G+ RVR + ++R I + + + AP + + PRV+
Sbjct: 671 EVRIGQFRVRQPQASVRRIWPRREEVSQTFAPPV-----------------SVTTIPRVE 713
Query: 676 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
+ LRG+ VEEA +LD L A + V+HG GTG +++ + LR+HP V
Sbjct: 714 P---EIHLRGLHVEEALDRLDRYLDRAVRAGLPWVRVVHGKGTGTLRQAIHAFLRDHPLV 770
Query: 734 AKYEQESPM--NYGCTVAYIK 752
+E P G TV Y++
Sbjct: 771 KSWELAGPHEGGLGVTVVYLE 791
>gi|422314862|ref|ZP_16396313.1| MutS2 protein [Fusobacterium periodonticum D10]
gi|404593261|gb|EKA94832.1| MutS2 protein [Fusobacterium periodonticum D10]
Length = 778
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 211/776 (27%), Positives = 363/776 (46%), Gaps = 144/776 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + N L +E+ I I+ + I D AS DL IR +K N+ +
Sbjct: 112 KYKQLRDTIGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFE 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + +IT+R RM +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFDEPSLANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDG 190
NN L E E IL L AE+ ++ R+ I + D+ L +D+ A++ +A +D
Sbjct: 230 LNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDN 286
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
C I + VS +++E +HP +
Sbjct: 287 KCEIPT----VSNREVLSLEKARHPFI--------------------------------- 309
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++
Sbjct: 310 --DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIAIPASENSKIG 367
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A
Sbjct: 368 FFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFA 427
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SN
Sbjct: 428 MAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESN 487
Query: 431 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 479
AL IA+ +G II +A +K++E ++ + Q+ + + +EE +L+
Sbjct: 488 ALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLD 547
Query: 480 SQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQE 524
+ +L E I Y E E ++ +A+ L K + +Q+Q+
Sbjct: 548 RERAKQETLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKN 607
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
LN +++ ++E ++ +V+ + +F V
Sbjct: 608 LNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV------- 637
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK---- 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V I+ + K K
Sbjct: 638 -----GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYNV 691
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 699
N P ++ +DLRG V+E ++L+ L
Sbjct: 692 NTHKKTP-----------------------------VRSEIDLRGKMVDEGIYELETYLD 722
Query: 700 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 723 RATLNGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|421144927|ref|ZP_15604829.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488694|gb|EJG09547.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 778
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 209/780 (26%), Positives = 368/780 (47%), Gaps = 152/780 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR ++ L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKR----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P ++++ +S + + +HP +
Sbjct: 285 ENKCEIPTVNNKEILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE-----IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQ 520
R +A+ + + I Y E E ++ +A+ L K + +Q
Sbjct: 544 ARIDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQ 603
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 604 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV--- 637
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 638 ---------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEK 687
Query: 641 ----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
N P ++ +DLRG V+EA ++L+
Sbjct: 688 VYNMNTHKKTP-----------------------------VRSEIDLRGKMVDEAVYELE 718
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
I L A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 719 IYLDRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|418028172|ref|ZP_12666754.1| MutS [Streptococcus thermophilus CNCM I-1630]
gi|354687972|gb|EHE88023.1| MutS [Streptococcus thermophilus CNCM I-1630]
Length = 783
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKATRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|294784135|ref|ZP_06749436.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
gi|294488205|gb|EFG35550.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
Length = 778
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 209/780 (26%), Positives = 368/780 (47%), Gaps = 152/780 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P ++++ +S + + +HP +
Sbjct: 285 ENKCEIPTVNNKEILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE-----IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQ 520
R +A+ + + I Y E E ++ +A+ L K + +Q
Sbjct: 544 ARIDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQ 603
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 604 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV--- 637
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ + K K
Sbjct: 638 ---------GDRVFVKSI-NQFANILKINTSKESTSVQAGILKLEVPFDEIKIVEEKKEK 687
Query: 641 ----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
N +P ++ +DLRG V+EA ++L+
Sbjct: 688 VYNMNTHKKSP-----------------------------VRSEIDLRGKMVDEAIYELE 718
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
L A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 719 TYLDRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|418961600|ref|ZP_13513485.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
gi|380343695|gb|EIA32043.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
Length = 786
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 208/692 (30%), Positives = 329/692 (47%), Gaps = 119/692 (17%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------DMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLY 496
I+ A++L + +E+ L+ +R E + R A LH ++ +
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLEANF 557
Query: 497 REIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDASADEI 551
+ E + +++ +A A+ +ET++ EL K+++ V E L DA +
Sbjct: 558 HQFERQKENMLEQAKEKANQIVEETKKKSDELISELRKMKMSAVSNIEEKNLIDAQG-RV 616
Query: 552 NSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
N+L +E+ ++ E H P+DD V V S G +
Sbjct: 617 NALHQETNLKKNKVLRKAKKQQELH-PNDD------------------VMVNSYGQR--G 655
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + VQ G +++++ ++++ I K + +++G+ S
Sbjct: 656 VLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPKRAGTVLKS 701
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
+ + P +LDLRG R E A ++D I A + + +IHG GTG ++
Sbjct: 702 SSSSHVSP-------TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTG 754
Query: 723 VLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
++ L+ + V +E SP N G TV Y K
Sbjct: 755 IINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|386087362|ref|YP_006003236.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
gi|312279075|gb|ADQ63732.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
Length = 783
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 349/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L ++E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQIVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGIWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|157363912|ref|YP_001470679.1| MutS2 family protein [Thermotoga lettingae TMO]
gi|157314516|gb|ABV33615.1| MutS2 family protein [Thermotoga lettingae TMO]
Length = 770
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 221/743 (29%), Positives = 349/743 (46%), Gaps = 115/743 (15%)
Query: 27 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI-----FQAG 81
T++ E+I CID + D ASE L+ IR E+K+ + KK+ +I
Sbjct: 125 TKMVEEIHKCIDENGWV-RDNASEKLKEIRDEQKK-------ITKKIRKEIENFVNSHRN 176
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +P+ T R R +KAS+K + GI +VSS+ TYF+EP+ V NN L +
Sbjct: 177 FLQEPVATIRDGRHVFPVKASYKSQIK-GIVHSVSSTAVTYFVEPEQFVPLNNNIRELRD 235
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL LT + + R+IK + + ID +ARA FA L +HV
Sbjct: 236 QEQDEINKILRDLTLRLFDNWRKIKSDLQTLAYIDSLYARAVFA---------LKYNAHV 286
Query: 202 SFDSS---INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
+ S I + +HPL+ +P K V
Sbjct: 287 IYPSQEGVIKLISARHPLI---------------DPQKV--------------------V 311
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
ID+++ + +VITGPNTGGKT ++KT+GL M AG L + +LP F I+ D
Sbjct: 312 AIDVELAKDKCGLVITGPNTGGKTVTLKTVGLFCSMMMAGFPLTCDKNSKLPGFSKIVID 371
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
+GD Q ++QNLSTFS H++ I L + + +LVL+DE+GSGTDP EG ALA +I+ L+
Sbjct: 372 VGDEQDIQQNLSTFSSHMANIARALSIADQTTLVLLDELGSGTDPMEGAALALAIMDKLK 431
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ TTH + D F +A+ EF ETL+PTYR+L G G S+A IA+ +
Sbjct: 432 QSGCKFIATTHLTPVKVYAANDDNFVSASVEFDPETLKPTYRVLMGVPGASHAFEIARKL 491
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 498
G D I++ A++L+ E Y ++ + K + Q+ + + E
Sbjct: 492 GVDETILENARRLM------------GEDYMNIEKAIEKYQKQSIILQEKIRALEEEQEE 539
Query: 499 IEDEAKDLDRRAAHLKAKETQQVQQEL----NF---AKVQIDTVVQDFENQLRDASADEI 551
++ ++ ++ LK +++ +EL N+ K QID + + + RD A
Sbjct: 540 LKKIKEEYKKKYERLKKGRVEELDEELKNMYNYIKEMKKQIDEAISNVRKRDRDLEALRN 599
Query: 552 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 611
S I E +S +E + ++SE T+ G+ V +K+ G + VV + G
Sbjct: 600 ASKIFERQSRTIRKMEML---GETALSENITT------GDTVQLKN-GGAIGKVVGMRG- 648
Query: 612 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 671
+ +V + +++ +++ IP K K+++NP P + Y
Sbjct: 649 -EKFVVDFSGIKIEAYSSSLVKIPPEKLKDSSNPHPVF------------------SYYN 689
Query: 672 PRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
P SK +D+RG+ VEEA ++ I V +VIHG GTG + + E+LR
Sbjct: 690 P---LSKPEIDVRGLTVEEAEPLVEDFIDKLVLSEFKVGYVIHGKGTGRLAVGIWEVLRR 746
Query: 730 HPRVAKYEQESPMNYGCTVAYIK 752
RV KY +P G V ++
Sbjct: 747 DGRVKKYRFGTPSEGGTGVTVVE 769
>gi|340754472|ref|ZP_08691225.1| MutS2 protein [Fusobacterium sp. 2_1_31]
gi|229423979|gb|EEO39026.1| MutS2 protein [Fusobacterium sp. 2_1_31]
Length = 778
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 209/772 (27%), Positives = 368/772 (47%), Gaps = 136/772 (17%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + N L +E+ I I+ + I D AS DL IR +K N+ +
Sbjct: 112 KYKQLRDTIGNIPNLRMIEDMINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFE 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + +IT+R RM +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFDEPSLANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDG 190
NN L E E IL L AE+ ++ R+ I + D+ L +D+ A++ +A +D
Sbjct: 230 LNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDN 286
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
C I + VS +++E +HP +
Sbjct: 287 KCEIPT----VSNREVLSLEKARHPFI--------------------------------- 309
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++
Sbjct: 310 --DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIG 367
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A
Sbjct: 368 FFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFA 427
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SN
Sbjct: 428 MAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESN 487
Query: 431 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 479
AL IA+ +G II +A +K++E ++ + Q+ + + +EE +L+
Sbjct: 488 ALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLD 547
Query: 480 SQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQE 524
+ +L E I Y E E ++ +A+ L K + +Q+Q+
Sbjct: 548 RERAKQETLVIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKN 607
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
LN +++ ++E ++ +V+ + +F V
Sbjct: 608 LNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV------- 637
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 644
G++V VKS+ ++ A ++++ ++ VQ G +++ V
Sbjct: 638 -----GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEV------------------ 673
Query: 645 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 702
P ++ +E ++ S++++ ++ +DLRG V+E ++L+ L A
Sbjct: 674 PFEEIKIVEEKKEKVYNVSTHKKTPV-------RSEIDLRGKMVDEGIYELETYLDRATL 726
Query: 703 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 727 NGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|423512651|ref|ZP_17489182.1| MutS2 protein [Bacillus cereus HuA2-1]
gi|402447575|gb|EJV79425.1| MutS2 protein [Bacillus cereus HuA2-1]
Length = 786
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 219/739 (29%), Positives = 352/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++ + QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLKKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|312143799|ref|YP_003995245.1| MutS2 family protein [Halanaerobium hydrogeniformans]
gi|311904450|gb|ADQ14891.1| MutS2 family protein [Halanaerobium hydrogeniformans]
Length = 790
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 215/743 (28%), Positives = 346/743 (46%), Gaps = 144/743 (19%)
Query: 44 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 98
I D AS L+ +RA + ++EN LDS++K Q + + ++TKR +R V
Sbjct: 152 IADDASSKLKSLRA-KIDSIENGIRDKLDSIIKSSKYQDM----LQESIVTKRENRYVVP 206
Query: 99 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 158
+K H+ DGI S+SG T FMEP V NN + E AE IL +L+++I
Sbjct: 207 VKQEHRNKF-DGIIHGQSASGLTLFMEPMAVVRLNNQLREVRAQESAEIQRILQVLSSKI 265
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A+ IK + + +D+ A A F+ D P ++ + I+++ +HPLL
Sbjct: 266 AEQAEIIKKDLKIISHLDVISASARFSLDHDCNAP------DINQEGLIDLKEARHPLL- 318
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+ PVPID+++ + +VITGPNT
Sbjct: 319 -----------------------------------KEEPVPIDVQLGDQISTLVITGPNT 343
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT S+KT+GL +LM++ G+++PAK + + F + ADIGD QS+EQ+LSTFS H+++
Sbjct: 344 GGKTVSLKTVGLLTLMAQTGMHIPAKANSTIAVFKKVFADIGDEQSIEQSLSTFSSHMTK 403
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I + L +LVL+DE+G GTDP EG AL SIL+ L+ + + + TTHY+ L
Sbjct: 404 IKEFLAESDSNTLVLMDELGVGTDPEEGAALGISILEELQQKGAVTIATTHYSQLKSYAY 463
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
ENA+ EF +E+LRPTY ++ G G SNA IA +G II+RA+ L+
Sbjct: 464 GADNVENASVEFDIESLRPTYNLIMGVPGGSNAFEIALRLGIPEGIIKRARSLL-----T 518
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASL---------------------HAEIMDLYR 497
++ + ++ L +ER++ + H E M+ R
Sbjct: 519 EEEIKVEDIINELNQERKRYKRLREEMEEYRRREKELKEKYEKMIAEQQQKHEEEMEKAR 578
Query: 498 EIEDE-----AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 552
+ +E K+ R + LK K+ + + E++ A+ + + ++D EN L ++ N
Sbjct: 579 QKAEELVVKTKKETRRIISSLKEKDYSK-RSEVDRAQTEANKDLKDLENIL-----EKKN 632
Query: 553 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 612
I + + D V G+QV V S+G K ++ + +
Sbjct: 633 KAIDDG------------TEKDLVV------------GDQVRVNSIGRK-GEIISIDEEK 667
Query: 613 DTVLVQYGKMRVRVKKNNIRP--IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
+Q G M+V +++ IP S+ + R++K Q
Sbjct: 668 AEAKIQAGIMKVTASLSDLVKVDIPESEEEELLKKY-RVQKSQH---------------V 711
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 728
P++ DLRG R A QLD L A + + ++HG GTG ++E V EIL
Sbjct: 712 SPKI-------DLRGERYGAAQSQLDKYLDDAFLAGLNEVEIVHGKGTGALREAVEEILE 764
Query: 729 NHPRVAKYE--QESPMNYGCTVA 749
+P V+ + ++ G T+A
Sbjct: 765 KNPHVSDFRLGRQREGGTGVTIA 787
>gi|191637667|ref|YP_001986833.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|385819398|ref|YP_005855785.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|385822563|ref|YP_005858905.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|409996521|ref|YP_006750922.1| MutS2 protein [Lactobacillus casei W56]
gi|238693020|sp|B3WC74.1|MUTS2_LACCB RecName: Full=MutS2 protein
gi|190711969|emb|CAQ65975.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|327381725|gb|AEA53201.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|327384890|gb|AEA56364.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|406357533|emb|CCK21803.1| MutS2 protein [Lactobacillus casei W56]
Length = 786
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 222/757 (29%), Positives = 359/757 (47%), Gaps = 107/757 (14%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+ L L ++ L +L ++ +D + D AS L +R E + S+ K
Sbjct: 115 FRQLYTLQESLTVLPQLSRRLKTAVDPDGTLT-DEASPQLHGVR-------EQIKSIEGK 166
Query: 73 VAAQIF------QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
+ ++ Q+ + P++T R R + +KA ++ G+ + S++G T F+EP
Sbjct: 167 IRGKMTNYTRGAQSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEP 225
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
+ V NN +E+AE IL+ L+ E+A +IK + D A+A A+
Sbjct: 226 QVIVALNNRLREAQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAK 285
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P+ VS D+ + + +HPL+ +P K V
Sbjct: 286 AEKATEPL------VSADNDVLLRDARHPLI---------------DPHK--------VV 316
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
G+ DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA +
Sbjct: 317 GN------------DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDE 364
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
R+ FD + ADIGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG
Sbjct: 365 SRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEG 424
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA +IL + + V TTHY +L + NA+ EF +TL+PTYR+L G
Sbjct: 425 AALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVP 484
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES------ 480
G SNA +I+ +G I++RA+ ++ H + + L ++R+ E+
Sbjct: 485 GRSNAFDISARLGLPSVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAAR 539
Query: 481 -QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
Q A S+H E+ Y++ E +D + A KA ++ A+ + D +++
Sbjct: 540 RQLADAQSVHDELAAAYKKFTTE-RDAQLQQAKDKANSL------VDKAQTKADKIIKQL 592
Query: 540 -ENQLRDASADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVK 596
+ QL + + N LI +A A+ + H+ P + G++V V
Sbjct: 593 RQMQLTNPGTVKENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVA 648
Query: 597 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 656
S D+ T++E D VQ G ++++V + + I SK+ A P ++
Sbjct: 649 SY-DQTGTLLE-QFDKKHWQVQLGILKMKVPTDEMEKIKPSKQSAAQRPVVKV------- 699
Query: 657 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 714
SG S GP +LDLRG R ++A LD I A + +IHG+
Sbjct: 700 -SGGGMS-------GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGL 746
Query: 715 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
GTG ++ V + L+ + +V Y +P N G + A I
Sbjct: 747 GTGAIRNGVTQYLKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|229062235|ref|ZP_04199557.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
gi|228717063|gb|EEL68742.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
Length = 786
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 219/739 (29%), Positives = 352/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++ + QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|423519234|ref|ZP_17495715.1| MutS2 protein [Bacillus cereus HuA2-4]
gi|401159591|gb|EJQ66974.1| MutS2 protein [Bacillus cereus HuA2-4]
Length = 786
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 219/739 (29%), Positives = 352/739 (47%), Gaps = 104/739 (14%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDSGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ A + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAPKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNRDQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLG 599
+ + LI+ E A +V+ + N + P+ G++V V + G
Sbjct: 603 INVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFG 653
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
K + +V D VQ G ++++VK++N+ I KQ E +
Sbjct: 654 QKGQLLKKV--SDTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVA 698
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 717
S + S LDLRG R E+A +++ L A S + +IHG GTG
Sbjct: 699 SVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTG 749
Query: 718 VVKERVLEILRNHPRVAKY 736
+++ V + L+ H V Y
Sbjct: 750 ALRQGVQDYLKKHRGVKTY 768
>gi|385840651|ref|YP_005863975.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
gi|300214772|gb|ADJ79188.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
Length = 786
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 318/674 (47%), Gaps = 83/674 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------GMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
I+ A++L + +E+ L+ +R E + E +L+ ++E
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLETNF 557
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAI 562
+R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 558 HQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVN 617
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
A E + + P + V V S G + V+ + VQ G +
Sbjct: 618 ALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQLGIL 673
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
++++ ++++ I K + +++G+ S+ + P +LD
Sbjct: 674 KMKIDESDLEKIK--------------VKDTQPKRAGAVLKSSSSSHVSP-------TLD 712
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES 740
LRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +E S
Sbjct: 713 LRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNFEFAS 772
Query: 741 PMN--YGCTVAYIK 752
P N G TV Y K
Sbjct: 773 PNNGGNGATVVYFK 786
>gi|417986118|ref|ZP_12626693.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
gi|410526874|gb|EKQ01752.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
Length = 786
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 332/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPGAIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E +D + A KA ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-RDAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|262067259|ref|ZP_06026871.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
gi|291379033|gb|EFE86551.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
Length = 778
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 211/776 (27%), Positives = 363/776 (46%), Gaps = 144/776 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + N L +E+ I I+ + I D AS DL IR +K N+ +
Sbjct: 112 KYKQLRDTIGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFE 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + +IT+R RM +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFDEPSLANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDG 190
NN L E E IL L AE+ ++ R+ I + D+ L +D+ A++ +A +D
Sbjct: 230 LNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDN 286
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
C I + VS +++E +HP +
Sbjct: 287 KCEIPT----VSNREVLSLEKARHPFI--------------------------------- 309
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++
Sbjct: 310 --DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIG 367
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A
Sbjct: 368 FFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFA 427
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SN
Sbjct: 428 MAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESN 487
Query: 431 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 479
AL IA+ +G II +A +K++E ++ + Q+ + + +EE +L+
Sbjct: 488 ALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLD 547
Query: 480 SQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQE 524
+ +L E I Y E E ++ +A+ L K + +Q+Q+
Sbjct: 548 RERAKQETLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKN 607
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 584
LN +++ ++E ++ +V+ + +F V
Sbjct: 608 LNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV------- 637
Query: 585 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK---- 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V I+ + K K
Sbjct: 638 -----GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYNV 691
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 699
N P ++ +DLRG V+E ++L+ L
Sbjct: 692 NTHKKTP-----------------------------VRSEIDLRGKMVDEGIYELETYLD 722
Query: 700 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 723 RATLNGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRVGGHGEGGLGCTVVTLK 778
>gi|257126841|ref|YP_003164955.1| MutS2 family protein [Leptotrichia buccalis C-1013-b]
gi|257050780|gb|ACV39964.1| MutS2 family protein [Leptotrichia buccalis C-1013-b]
Length = 779
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 208/762 (27%), Positives = 369/762 (48%), Gaps = 107/762 (14%)
Query: 8 NIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 67
N+ +Y + L + + ++E I I+ + ++ D AS L +R +++ N+
Sbjct: 108 NVRDKYRTIWNLFSDVEEVKDIENFISEAINDEG-VLKDEASIGLRDVRRQKQNINANIK 166
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++ + I + +IT+R R + +K K L+ GI + S++G+T ++EP
Sbjct: 167 EKFDELISNKSTQNAIQERIITQRNDRYVIAVKTDFKGLIK-GIEHDRSATGSTVYIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE----IKYLMDRVLEIDLAFARAG 183
V NN E E IL LT E+ K+++E IK +++R +D A+
Sbjct: 226 NVVSLNNKLREYEAREREEIRKILLRLT-ELVKTKKEEILEIKEILER---LDFIDAKTT 281
Query: 184 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 243
++ + P + ++ ++ + +HPL+ E
Sbjct: 282 YSVNKKCIVPKIINKEYLKLVEA------RHPLI------------------------GE 311
Query: 244 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 303
TV VPI+ ++ +++ITGPNTGGKT ++K GL ++M+ +G+ +PA
Sbjct: 312 NTV-----------VPINFELGNPENIMLITGPNTGGKTVTLKVAGLLTIMALSGIPIPA 360
Query: 304 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 363
+ +F +LADIGD QSLEQNLS+FSGH+S+I DI+E + +SLVL+DE+GSGTDP
Sbjct: 361 NEKTEIGYFHNVLADIGDEQSLEQNLSSFSGHVSKIKDIIENANSKSLVLMDELGSGTDP 420
Query: 364 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 423
EG A A +I+ YL + +++TTHY+++ T ++A+ EF++ETL PTYR+L
Sbjct: 421 MEGAAFAMAIIDYLNKKHVTSIITTHYSEVKAYAFNTTGIKSASMEFNVETLSPTYRLLE 480
Query: 424 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 483
G G+SNAL IA+ G ++I+ A+ + R E+ +S+ E+ +LE+
Sbjct: 481 GIPGESNALIIARKYGISEEVIENAKSYI-----SEDNQRVEEMLKSIKEKNDELETMQA 535
Query: 484 TAASLHAEI---MDLYRE----IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 536
+ E+ +Y + +E+E ++ +RA + +Q + AK ID +
Sbjct: 536 QLEATRTELDKQKSIYEQNMIKLENEKNEIIKRAYEEADNYLKNMQAK---AKNLIDKIN 592
Query: 537 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVH 594
+ E++ DA K ++ ++ + E+ D +V E + F GE+V
Sbjct: 593 SE-ESKKEDA---------KNAQRSLNMLRESFITDKKKNVKEKKVVTQNVDFAVGEEVL 642
Query: 595 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 654
VK++ + +P ++ + VQ G +++ V ++I I K N A R Q
Sbjct: 643 VKTMNQNGKILKIMP--NNRIQVQTGILKLVVSTDDIVKIQKKKTNKFKNFASLKRTSQ- 699
Query: 655 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 712
+ +DLRGM +EA +L+ + A +++IH
Sbjct: 700 ----------------------VRGEIDLRGMNADEAIAELETYMDRAMLTGYHEIYIIH 737
Query: 713 GMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
G GT V+++++ E LR V +++ ++ GCTV +K
Sbjct: 738 GKGTMVLRKKIHEYLRTSKYVTEFKDANQNEGGIGCTVVILK 779
>gi|350567081|ref|ZP_08935686.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
gi|348659744|gb|EGY76471.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
Length = 766
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 346/690 (50%), Gaps = 80/690 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKAS 102
I D AS+ L IR + + DS+ +++++ I + ++T R R + +K
Sbjct: 148 IADSASQKLSSIRRQISKKK---DSIRERLSSMISSGSEYLQDAIVTIREGRYVIPVKNE 204
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
HK + GI +VSSS T ++EP V NN L E E IL +++ +
Sbjct: 205 HKSKVK-GIVHDVSSSKQTVYIEPLAVVNINNELRSLEVEEREEIERILQEISSRVDDVR 263
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
EI D + EID FA+ + DG PI++ + +V N++ +HPLL +
Sbjct: 264 HEILLNQDLLREIDFIFAKGKLSLEYDGRKPIINDKGYV------NLKSARHPLLDKKKV 317
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
VPIDI + E ++ITGPNTGGKT
Sbjct: 318 -----------------------------------VPIDISLGGEFTSLIITGPNTGGKT 342
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
S+KTLGL +LM++ GL++P + + FD +LADIGD QS+EQ+LSTFS H+ IV+I
Sbjct: 343 VSIKTLGLLTLMAQYGLHIPTMENSEIAIFDKVLADIGDEQSIEQSLSTFSSHMVNIVEI 402
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
L+ ++ +SLV+ DE+G+GTDP+EG ALA SI+ ++ R + TTHY L
Sbjct: 403 LKEITPKSLVIFDELGAGTDPTEGAALARSIMDFMLRRKIRCISTTHYNQLKLYALSTDG 462
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 462
+NA+ EF+++TL PTY++L G G SNA I++ +G II+ A+K++ E +
Sbjct: 463 VQNASMEFNVDTLSPTYKLLIGVPGKSNAFEISRKLGLPDIIIRDAKKMISEDNIEFE-- 520
Query: 463 RKSELYQSLMEERRKLE--SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
E+ S+ ++R ++E QA SL + + + E E + +R KA+E +
Sbjct: 521 ---EVLSSIEKDRTRIEEYKQAAEIESLEYKKKNEKLKKEIEKLNQEREKVLEKARE--E 575
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+ + + ++ V+ + ++LR+ ++E++ ++ + ++F + +
Sbjct: 576 ANRLVLTTRENMELVINEL-SELREQMNSAQARKLQEAQDLYRESFKSAQKKNEFVLEKA 634
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
+ + GE V SL + V+E+P + VL+Q G +++++ P+ R
Sbjct: 635 DEVIGELKVGETVRSTSLNSE-GVVLELPDSKNQVLLQMGMLKMKL------PLDTLIRT 687
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 698
NA ++E +++ + ++++ Y K+ +D+RG E+A +D I
Sbjct: 688 NA---------EKEVQKTKTRNIIDKKSKY------IKSEIDIRGNNFEDARVIVDKYID 732
Query: 699 LACWESRSVLFVIHGMGTGVVKERVLEILR 728
A + +IHG GTGV++E++ + LR
Sbjct: 733 DAYLSGIKEIRIIHGKGTGVLREKIRDYLR 762
>gi|387784883|ref|YP_006070966.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
gi|338745765|emb|CCB96131.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
Length = 782
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 202/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIANRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSDQLRPQAAAI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIPKISD------NQTLQLHNVRHPLLVN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVD 612
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|297529147|ref|YP_003670422.1| MutS2 family protein [Geobacillus sp. C56-T3]
gi|297252399|gb|ADI25845.1| MutS2 family protein [Geobacillus sp. C56-T3]
Length = 792
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 216/717 (30%), Positives = 357/717 (49%), Gaps = 86/717 (11%)
Query: 44 ILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS+ L +R + + R E L+++++ +AQ + +IT R R + +
Sbjct: 154 VLDAASDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPV 209
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ GI + S+SGAT F+EP+ VE NN E E IL L+A++A
Sbjct: 210 KQEYRGAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVA 268
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ + ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 269 EQAEPLARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL-- 320
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
D E + VP DI++ + +VITGPNTG
Sbjct: 321 ------------------DQEKA---------------VPNDIELGGDYTTIVITGPNTG 347
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 348 GKTVTLKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNI 407
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
VDIL V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY++L
Sbjct: 408 VDILRHVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYSELKAYGYN 467
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 468 RPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SA 522
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ H + SL +++ E + A + E L E E + ++L+ A A+ TQ
Sbjct: 523 ESHNVENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQ 582
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ + A+ + + ++Q+ ++ A+ + E++ +AA A + ++
Sbjct: 583 KAADIIRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAK 639
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
S Q G++V V SL K + +V DD VQ G +++++++ ++ I ++
Sbjct: 640 KAASRHVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSASA 697
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
K+ P ++ + A S E LDLRG R E+A +L+ L
Sbjct: 698 KD-VTPIATVKGK-------DAHVSLE--------------LDLRGERYEDALIRLEKYL 735
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
A + + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 736 DDAVLAGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|423138020|ref|ZP_17125663.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
gi|371958582|gb|EHO76291.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
Length = 778
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 214/781 (27%), Positives = 369/781 (47%), Gaps = 154/781 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRLIEDVINKTINAEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP +
Sbjct: 285 ENRCEIPTVSNREILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAKAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V N I+ + K
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKE 686
Query: 640 K----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N P ++ +DLRG V+EA ++L
Sbjct: 687 KVYNMNTHKKTP-----------------------------VRSEIDLRGKMVDEAVYEL 717
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ L A + +F+IHG GTG ++E +L+ L+ V +Y GCTV +
Sbjct: 718 ETYLDRATLNGYTEVFIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTL 777
Query: 752 K 752
K
Sbjct: 778 K 778
>gi|384438749|ref|YP_005653473.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359289882|gb|AEV15399.1| hypothetical protein TCCBUS3UF1_3510 [Thermus sp. CCB_US3_UF1]
Length = 743
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 206/672 (30%), Positives = 327/672 (48%), Gaps = 109/672 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+ +R R CV +KA + +P GI L+ S SGAT F+EP V+ NN L E E
Sbjct: 174 FVAFKRERYCVPVKAGMAHKVP-GILLDESESGATLFVEPLSVVKLNNRLQALRLQEEEE 232
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ +A+ + ++ + +DL A+A A+ + S + F +
Sbjct: 233 VGRILRELSERLAQDP-GVPGTLEALGLLDLVQAQAALAKDL--------SLTRPRFGEA 283
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
++G HPL+ PV ++
Sbjct: 284 YRLQGAFHPLI-------------------------------------PHPVRNTFTLDE 306
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+TR+++I+GPN GGKTA +KTLGLA LM+++GL++ A+ L W D + ADIGD QSL+
Sbjct: 307 KTRLILISGPNMGGKTALLKTLGLAVLMAQSGLFVGAERA-LLAWPDRVFADIGDEQSLQ 365
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
+NLSTF+GH+ R+ +L + +SLVLIDE+GSGTDP EG AL+ +IL+ L +R +V
Sbjct: 366 ENLSTFAGHLQRLKAMLLEATAQSLVLIDELGSGTDPEEGAALSQAILEALLERGVKGMV 425
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTH + L +NA+ F LE LRPTY ++ G G S AL IA+ + ++++
Sbjct: 426 TTHLSPLKAFAQGGEGIQNASMRFDLERLRPTYELVLGVPGRSYALAIARRLSLPEEVLR 485
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE-DEAKD 505
RA+ L + +R +L + L ER +E + R A+ A+ L +E EA+
Sbjct: 486 RAEAL-------QGGNRLEDLLERLEGERLAMEEERRRLAAELAQAEALRARLEAREARY 538
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAA 564
+ RA L+A +++E+ +Q++ ++ + + R + D + L+ A
Sbjct: 539 QEERAERLRA-----LEEEVRGRLLQVEAELKALKEKARSEGKRDALRELM--------A 585
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
+ E + + +P G V V SLG K VVE+ G++ LVQ G +++
Sbjct: 586 LKEKY---AKKAPPPPPPPGLSP--GALVEVPSLG-KRGRVVELRGEE--ALVQVGPVKL 637
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+K ++P+P + P P L K PR + +DLR
Sbjct: 638 NLKAKELKPLPGEE-----APKPLLAK--------------------PRREA--KEVDLR 670
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 742
G+ VEEA ++D AL A S L ++HG GTG +++ + E LR RV + P
Sbjct: 671 GLTVEEALLEVDDALEEAKALGLSTLRLLHGKGTGALRQAIREFLRRDKRVEGFADAPPH 730
Query: 743 --NYGCTVAYIK 752
+G TV ++
Sbjct: 731 EGGHGVTVVALR 742
>gi|311069349|ref|YP_003974272.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|419819994|ref|ZP_14343611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
gi|310869866|gb|ADP33341.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|388475847|gb|EIM12553.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
Length = 785
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 213/741 (28%), Positives = 355/741 (47%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L+ELE +I CID +LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSELEREINSCID-DYGEVLDHASETLRGIRTQLRTLESRIRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL LT A+ E+ + + +D FA+A +A+ P+++ + +
Sbjct: 243 KEKQEIERILRELTEHTAEHTHELFQNLQVLQTLDFIFAKAKYAKASKATKPLINDRGFI 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P + V N D
Sbjct: 303 RLKKA------RHPLL----------------PPEQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL ++M+++GL++PA+ F+ + ADIGD
Sbjct: 322 IELGGDFTTIVITGPNTGGKTVTLKTLGLLTVMAQSGLHIPAEEGSEAAVFEHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVGILERVNENSLVLFDELGAGTDPQEGAALAMSILDEVHHTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF++ETL PTY++L G G SNA I++ +G
Sbjct: 442 ARVIATTHYPELKAYGYNRNGVMNASVEFNIETLSPTYKLLIGVPGRSNAFEISRRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II +A+ + + + + SL +++ E++ S+ E L++E++
Sbjct: 502 EHIIGQAKSEM-----TAEHNEVDTMIASLEHSKKRAEAELSETESIRKEAETLHKELQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKES 558
+ +L+ + L + Q+ +++N A + + ++ + +++ + E+ + K
Sbjct: 557 QIIELNSKKDKLLEEAEQKAIEKVNAATKEAEDIIHELRLIKSEHKSFKDHELINAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ A + P G++V V + G K T++E G + VQ
Sbjct: 617 EDAVPAF----EKSKQPPKQKKEKRELKP--GDEVKVLTFGQK-GTLLEKTGSSEWN-VQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ + +S P P+ +E + G A
Sbjct: 669 IGILKMKVKEKDLEFMKSS-------PEPK----KEKTIAAVKGKDYHVAL--------- 708
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A ++ D LA + S +IHG GTG +++ V +L+NH V
Sbjct: 709 -ELDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQNLLKNHRSV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KNSRFGEAGEGGSGITIVELK 785
>gi|228477326|ref|ZP_04061964.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
gi|228251345|gb|EEK10516.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
Length = 782
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSDQLRPQAAAI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ ID + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHIDFIRGKYLYLQDKKAVIP------KISDNQTLQLLNVRHPLLVN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQSVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVD 612
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|445382616|ref|ZP_21427302.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
gi|445395409|ref|ZP_21429035.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748486|gb|ELW73452.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748654|gb|ELW73613.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
Length = 783
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRIAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|417982883|ref|ZP_12623531.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|417995567|ref|ZP_12635859.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|417998549|ref|ZP_12638768.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|418001406|ref|ZP_12641551.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|418014595|ref|ZP_12654190.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
gi|410529338|gb|EKQ04156.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|410537240|gb|EKQ11818.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|410540964|gb|EKQ15468.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|410546729|gb|EKQ20974.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|410553224|gb|EKQ27228.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
Length = 786
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 333/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPSVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E R A +AK+ + ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-----RDAQLQQAKD--KANTLVDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|229013753|ref|ZP_04170881.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|423489714|ref|ZP_17466396.1| MutS2 protein [Bacillus cereus BtB2-4]
gi|423495437|ref|ZP_17472081.1| MutS2 protein [Bacillus cereus CER057]
gi|423497768|ref|ZP_17474385.1| MutS2 protein [Bacillus cereus CER074]
gi|228747422|gb|EEL97297.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|401150344|gb|EJQ57803.1| MutS2 protein [Bacillus cereus CER057]
gi|401162248|gb|EJQ69606.1| MutS2 protein [Bacillus cereus CER074]
gi|402431005|gb|EJV63077.1| MutS2 protein [Bacillus cereus BtB2-4]
Length = 786
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 220/736 (29%), Positives = 353/736 (47%), Gaps = 98/736 (13%)
Query: 15 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI ++ D AS+ L IR + R E L+++
Sbjct: 117 PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLKQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 489
NA I+K +G ++I RA+ + K E + +EE +K + R A H
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEH 543
Query: 490 AEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 548
+ + L+RE++ + + + K ++ ++++ AK + + ++ + QLR A
Sbjct: 544 RKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQL 602
Query: 549 DEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKL 602
+ + LI+ E A +V+ + V NT+ + G++V V + G K
Sbjct: 603 VNVKDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 720
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 721 ERVLEILRNHPRVAKY 736
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|55823654|ref|YP_142095.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
gi|81676513|sp|Q5LY40.1|MUTS2_STRT1 RecName: Full=MutS2 protein
gi|55739639|gb|AAV63280.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 783
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|222153669|ref|YP_002562846.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766604|sp|B9DVK7.1|MUTS2_STRU0 RecName: Full=MutS2 protein
gi|222114482|emb|CAR43343.1| putative DNA mismatch repair protein [Streptococcus uberis 0140J]
Length = 777
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 212/722 (29%), Positives = 349/722 (48%), Gaps = 114/722 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ +R + N LL+ + + A + + LI R + + +K + ++ +
Sbjct: 147 ASPELDRLRRQIAENERYSRQLLQDILKK--NADYLSESLIASRNGKSVLPVKNTFRHRV 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI-- 165
G+ ++S+SG T ++EP+ V+ N +L E E IL L+ + R +
Sbjct: 205 -SGVVHDISASGNTVYIEPRALVQVNEEMTQLLADERHEIARILKELSQLLRPHSRALAN 263
Query: 166 -KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 224
+L+ L F RA + ++ I +S D +I + ++HPLL
Sbjct: 264 NAWLLGH-----LDFVRAKYHYLVNNKATI----PKISKDKNIQLLNVRHPLL------- 307
Query: 225 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 284
NP+ +D+ ++ + V+VITGPNTGGKT
Sbjct: 308 -------KNPVANDLHFAD-----------------------DLAVIVITGPNTGGKTIM 337
Query: 285 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 344
+KTLGLA LM ++GL + A ++ FD I ADIGD QS+EQ+LSTFS H++ IVDILE
Sbjct: 338 LKTLGLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILE 397
Query: 345 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 404
+ SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L + E
Sbjct: 398 ESNSNSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIESDYVE 457
Query: 405 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 464
NA+ EF ++L+PTYR + G G SNA IA+ +G I++ A+++ +
Sbjct: 458 NASMEFDSQSLKPTYRFMQGVPGRSNAFEIARRLGLAETIVKEAEQMTD---------TD 508
Query: 465 SELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-------KAK 516
S++ + + E ER+ L S+ R +D RE+E E +R L K K
Sbjct: 509 SDVNRIIEELERQTLSSRRR---------LDHIREVEQENIKFNRAVKKLYNEFSLAKDK 559
Query: 517 ETQQVQQELNFAKVQID-TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
E ++ QE A V++ T ++ ++L + + + + +I E++S + ++V P D
Sbjct: 560 EIEKASQEAQ-AIVELALTESEEILSKLHEKAELKPHEII-EAKSKLKSLV----PQRDL 613
Query: 576 SVSETNTSSFT---PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
S ++ + P+ G+ + V + G + + +V G+ V KM ++ + +
Sbjct: 614 SKNKVLKKAKKLREPRIGDDIIVSAYGQRGTLIGQVKGNKWEAQVGLIKMTLKEDEFQLV 673
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
+ +K ++K ++ GPR + LDLRG R EEA
Sbjct: 674 KVEAEAQKPKKQSINMVKKANQN---------------GPRAR-----LDLRGKRYEEAM 713
Query: 693 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCT 747
+LD I A + S + +IHG+GTGV++E V + LR H V + +P N GCT
Sbjct: 714 QELDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFAY-APQNAGGSGCT 772
Query: 748 VA 749
+A
Sbjct: 773 IA 774
>gi|196250214|ref|ZP_03148908.1| MutS2 family protein [Geobacillus sp. G11MC16]
gi|196210398|gb|EDY05163.1| MutS2 family protein [Geobacillus sp. G11MC16]
Length = 641
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 265/520 (50%), Gaps = 60/520 (11%)
Query: 29 LEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGID 84
LEE I ID + LD AS+ L IRA R E L+S+++ +AQ +
Sbjct: 132 LEEDIRRSIDDHGEV-LDTASDRLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLS 186
Query: 85 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 144
+IT R R + +K ++ GI + S+SGAT F+EP+ VE NN E
Sbjct: 187 DAIITIRNDRYVIPVKQEYRSAY-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEK 245
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
E IL L+A++A+ + +K ++ + D FA+A +A+ + P ++++ ++ F
Sbjct: 246 QEIERILRELSAKVAEHDEPLKRAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFL 305
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
+ +HPL+ D VP DI +
Sbjct: 306 QA------RHPLI-----------------------------------DQDKAVPNDIVL 324
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
+ +VITGPNTGGKT ++KT+GL ++M++AGL++PA + F + ADIGD QS
Sbjct: 325 GGDYTTIVITGPNTGGKTVTLKTVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQS 384
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+EQ+LSTFS H+ IVDIL V ESLVL DE+G+GTDP EG ALA +IL + R
Sbjct: 385 IEQSLSTFSSHMVNIVDILRHVDEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGART 444
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
V TTHY +L NA+ EF ETLRPTY++L G G SNA +I++ +G D +I
Sbjct: 445 VATTHYPELKAYGYNRPGVVNASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERI 504
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+RA +++ + H + SL +++ E A S E L E E + +
Sbjct: 505 IERA-----KVQVSAESHSVENMIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLE 559
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 544
+L+ + A A+ Q+ + A+ + + ++ N+LR
Sbjct: 560 ELEDKKAEQLAEAAQKATDIIRAAEREAERII----NELR 595
>gi|417988978|ref|ZP_12629502.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
gi|410540705|gb|EKQ15217.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
Length = 786
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 332/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EIGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPGVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E +D + A KA ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-RDAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|239629718|ref|ZP_04672749.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301065846|ref|YP_003787869.1| mutS family ATPase [Lactobacillus casei str. Zhang]
gi|417980047|ref|ZP_12620732.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|418004482|ref|ZP_12644505.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
gi|239528404|gb|EEQ67405.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438253|gb|ADK18019.1| MutS family ATPase [Lactobacillus casei str. Zhang]
gi|410525947|gb|EKQ00841.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|410549791|gb|EKQ23945.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
Length = 786
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 332/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPGVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E +D + A KA ++ A+ + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-RDAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|55821734|ref|YP_140176.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|81676665|sp|Q5M2P5.1|MUTS2_STRT2 RecName: Full=MutS2 protein
gi|55737719|gb|AAV61361.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|217967690|ref|YP_002353196.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
gi|217336789|gb|ACK42582.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
Length = 778
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 200/713 (28%), Positives = 348/713 (48%), Gaps = 96/713 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
++D AS +L+ IR +++R + + L+ + + ++ G + +IT R R V ++
Sbjct: 139 VIDSASPELKQIRQKKERLNQKVRETLENIIQKEWR-GYLQDQIITIRHGRYVVPVRQEF 197
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + GI + S+SG T ++EP+ VE NN L + E E IL+ LT+ + +
Sbjct: 198 RGKI-QGIVHDQSTSGLTVYVEPQVIVELNNQIALLESEEKREIERILTRLTSVLLSYKE 256
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
EI + E+D +A+ +A+ + PIL + + + +HP L
Sbjct: 257 EILENLRTSFELDFVYAKVKWAEKYKAITPILEKDKPI-----VILREARHPFL------ 305
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
D VPI ++V +VITGPNTGGKT
Sbjct: 306 ------------------------------GDKAVPITLEVGRYFHTLVITGPNTGGKTV 335
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL L+++AG+ +PAK L F+ + ADIGD QS+EQNLSTFS H++ I+ +
Sbjct: 336 TLKTIGLFVLLNQAGIPVPAKEGTTLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFI 395
Query: 344 ELVSR----ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ + R + LVLIDE+G+GTDP EG ALA ++L+Y ++ + V+ THY L + K
Sbjct: 396 DYLERTGDKKVLVLIDELGAGTDPQEGAALAVALLEYFHEKGTINVIATHYPQLKVIASK 455
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
ENA+ EF +LRP Y++ G G SNA+ I+K +G RKI+ RA L+
Sbjct: 456 YPGMENASMEFDEISLRPLYKVAMGIPGKSNAILISKRLGLPRKILDRAVSLL-----SE 510
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ + E+ L ++RRK + + + E+ + + I +E + L++ LK K +
Sbjct: 511 NEIKLEEVIGELQKDRRKYQEEIDKINKVKKELQEEKKRILEEREILEKEKEKLKTKYKE 570
Query: 520 QVQQELNFAKVQIDTVVQDFENQ---LRDASA--DEINSLIKESESAIAAIVEAHRPDDD 574
++ ++++ + ++ +++ + + ++DA + +E+ L KE +V R
Sbjct: 571 ELFKDISKIENRLKEIIRRLQEESLSMKDAQSLQEEVKKLKKE-------LVLEER---- 619
Query: 575 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
E S+ PQ G++V ++S K V+EV D+ LVQ G ++++V +
Sbjct: 620 ---EEPKALSYVPQVGDRVVLRS-TKKEGYVIEVDADEKIALVQVGLLKIKVPWTEL--- 672
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
AP L+++ + N+E+ PR +++R M V+E +
Sbjct: 673 -----------APSLKEESQLFSYVKVEKINQESI--PR------EINIRMMTVDEGLEE 713
Query: 695 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
+ L A + ++HG GTG ++ V + L P V +Y P G
Sbjct: 714 VKKYLEKAFLAGLKRVRIVHGKGTGKLRNAVHDYLSKVPYVKEYYLAPPNEGG 766
>gi|116628455|ref|YP_821074.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus LMD-9]
gi|122266950|sp|Q03IU4.1|MUTS2_STRTD RecName: Full=MutS2 protein
gi|116101732|gb|ABJ66878.1| DNA structure-specific ATPase involved in suppression of
recombination, MutS family [Streptococcus thermophilus
LMD-9]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|294781853|ref|ZP_06747185.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
gi|294481664|gb|EFG29433.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
Length = 778
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 214/777 (27%), Positives = 363/777 (46%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + N L +E+ I I+ + I D AS DL IR +K N+ +
Sbjct: 112 KYKQLRDTIGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFE 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + +IT+R RM +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFDEPSLANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDG 190
NN L E E IL L AE+ ++ R+ I + D+ L +D+ A++ +A +D
Sbjct: 230 LNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDN 286
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
C I + VS +++E +HP +
Sbjct: 287 KCEIPT----VSNREVLSLERARHPFI--------------------------------- 309
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++
Sbjct: 310 --DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIG 367
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A
Sbjct: 368 FFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFA 427
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SN
Sbjct: 428 MAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESN 487
Query: 431 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEERRKL 478
AL IA+ +G II +A +K++E ++ + Q+ E + L EE R L
Sbjct: 488 ALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-L 546
Query: 479 ESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQ 523
+ + +L E I Y E E ++ +A+ L K + +Q+Q+
Sbjct: 547 DRERAKQETLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQK 606
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
LN +++ ++E ++ +V+ + +F V
Sbjct: 607 NLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV------ 637
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK--- 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V I+ + K K
Sbjct: 638 ------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYN 690
Query: 641 -NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
N P ++ +DLRG V+E ++L+ L
Sbjct: 691 VNTHKKTP-----------------------------VRSEIDLRGKMVDEGIYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|386345470|ref|YP_006041634.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387910457|ref|YP_006340763.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
gi|339278931|emb|CCC20679.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387575392|gb|AFJ84098.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 158
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 459 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 513
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 514 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 573
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 574 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 633
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 634 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 693
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 694 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 749
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 750 YI 751
+
Sbjct: 781 TL 782
>gi|374338716|ref|YP_005095433.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
gi|372284833|emb|CCF03137.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
Length = 778
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 346/729 (47%), Gaps = 121/729 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL+
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQTRHPLLID-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDD 574
+D + + E L D ++ + + +I E++S + + P+ D
Sbjct: 571 I-------------VDKAIAESEEILKNLHDRASLKPHEVI-EAKSQLKKLA----PEVD 612
Query: 575 FSVSETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
S ++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 613 LSKNKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF 670
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
L K QE+ Q + S GPR + LDLRG R
Sbjct: 671 ----------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKR 709
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMN 743
EEA +LD I A + + + +IHG+GTGV++E V + LR H + Y ++
Sbjct: 710 YEEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGG 769
Query: 744 YGCTVAYIK 752
GCT+A ++
Sbjct: 770 SGCTIANLE 778
>gi|428174541|gb|EKX43436.1| hypothetical protein GUITHDRAFT_110559 [Guillardia theta CCMP2712]
Length = 900
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/714 (27%), Positives = 348/714 (48%), Gaps = 76/714 (10%)
Query: 37 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ-----------AGGIDK 85
+D +++ L R+ +++ + + +++L + K+AA + A +
Sbjct: 231 LDGSVVLQLKRSFDNVGQLSTKMYPQLQDLRKEIDKIAAAVTSTMDAMLKDTKIASTLQD 290
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI- 144
T R +R + + A++K + +GI VS +G+T ++EP+ ++ NN ++RL+ E+
Sbjct: 291 SFYTIRENRFVLPVSATNKNKI-NGIVHGVSGTGSTVYIEPQEVIDLNN-KLRLAEGELK 348
Query: 145 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 204
AEE I+ LL+ ++ R++K V ++D+A AR FA+ + V P VS
Sbjct: 349 AEEIRIMGLLSKKVGSLARDVKLATSAVCQLDMAAAREKFAEMLKAVRP------EVSSG 402
Query: 205 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 264
I+I +HP+L+ LR + PV D+ +
Sbjct: 403 GEIDIRSGRHPVLV---LRGIK------------------------------PVANDMSM 429
Query: 265 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 324
E VVI+GPN GGKT +KT+GL +L+ + G ++P + ++ F +LA IGD Q+
Sbjct: 430 NGEKPAVVISGPNAGGKTIVLKTVGLCALLVQHGCWVPCEEGSKMALFRRVLASIGDQQT 489
Query: 325 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 384
+E++LS+FS H+ + +L+ +L+L+DEI SGTDP++G ALA +IL+ L +
Sbjct: 490 VEEDLSSFSSHLKTLNTMLQHADEGTLILLDEIASGTDPTQGAALAQAILEELLGKAPKM 549
Query: 385 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 444
VVTTHY+ L L D+RF AA ++ PTYR+L G +G+S+A +IAK +G +
Sbjct: 550 VVTTHYSQLKALATVDSRFGVAAMQYV--NGAPTYRVLHGVSGESHAFSIAKKMGILEGV 607
Query: 445 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
I+RA+ L+ +Q + ++ ++L EER + A+ A ++ +E +
Sbjct: 608 IERAESLM------GEQAKMTKTLEALEEERTRASVAAQEAVEEREKLRRKLERLEKREE 661
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 564
++ RA L+ + ++ ++L A+ + V++ + D+ L+ + + A
Sbjct: 662 EIRSRAKELEKEGAREFLKQLKSAEQSVAEVIKQLQQNPDFKEVDKAKKLLDGLRTNLTA 721
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
E + + E G+ V + +G + V+ P + V+ G + +
Sbjct: 722 QEEEGAGEVPEGIKE----------GDFVMLLDVGSE-GEVISPPSSKGELQVRVGPLTL 770
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
R K + +R + ++ +P Q ++ GS +A+ V+T N+LDLR
Sbjct: 771 RTKVDRVRKVEGKTASSSPSPRASGSLTQ--KRGKKTGSKEYKAALQRAVRTPVNTLDLR 828
Query: 685 GMRVEEASHQLDIALACWES--RSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G R E+ +D L S + F++ G GTGVVK+ V E L A Y
Sbjct: 829 GFRAEQVGDAIDSFLDKMTSANQPTAFILSGHGTGVVKKVVQEHLATCMYAAAY 882
>gi|387760548|ref|YP_006067525.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
gi|339291315|gb|AEJ52662.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
Length = 782
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 202/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSNQLRPQAAAI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIP------KISDNQTLQLLNVRHPLLVN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVATFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVD 612
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|422340227|ref|ZP_16421180.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355369878|gb|EHG17268.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 778
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 214/776 (27%), Positives = 370/776 (47%), Gaps = 144/776 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQEKIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
D C I + VS +++E +HP +
Sbjct: 285 --DNRCEIPT----VSNREILSLEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFVRLQEE 543
Query: 475 RRKLESQARTAA------------SLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE-TQQ 520
R +A+ S + E + E+ +A L R H K KE +Q
Sbjct: 544 ARLDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVERIQHEEKNKEDAKQ 603
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 580
+Q+ LN +++ ++E ++ +V+ + DF
Sbjct: 604 IQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVDFKA--- 637
Query: 581 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 640
G++V VKS+ ++ A ++++ ++ VQ G +++ V + I+ +
Sbjct: 638 ---------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEVPFDEIKIV------ 681
Query: 641 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 699
E+++ +N + + ++ +DLRG V+EA ++L+ L
Sbjct: 682 -------------EEKKEKVYNVNNHKKT------PVRSEIDLRGKMVDEAVYELETYLD 722
Query: 700 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 723 RATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|295692280|ref|YP_003600890.1| DNA mismatch repair protein muts2 [Lactobacillus crispatus ST1]
gi|423318185|ref|ZP_17296082.1| MutS2 protein [Lactobacillus crispatus FB049-03]
gi|423320499|ref|ZP_17298371.1| MutS2 protein [Lactobacillus crispatus FB077-07]
gi|295030386|emb|CBL49865.1| DNA mismatch repair protein MutS2 [Lactobacillus crispatus ST1]
gi|405596674|gb|EKB70007.1| MutS2 protein [Lactobacillus crispatus FB049-03]
gi|405605103|gb|EKB78170.1| MutS2 protein [Lactobacillus crispatus FB077-07]
Length = 785
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 214/736 (29%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLS-NLA 258
Query: 160 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 570
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAK-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 571 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 620
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 736
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 737 EQESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|358066120|ref|ZP_09152654.1| MutS2 protein [Clostridium hathewayi WAL-18680]
gi|356695983|gb|EHI57608.1| MutS2 protein [Clostridium hathewayi WAL-18680]
Length = 792
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 202/664 (30%), Positives = 318/664 (47%), Gaps = 87/664 (13%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R R C+ +K+ +K + G+ + SS+G+T F+EP ++ NN L E
Sbjct: 185 PVITMRDGRYCLPVKSEYKNQVA-GMVHDQSSTGSTLFIEPMAIIKLNNELRELEIQEQK 243
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E A+L+ L+ ++ E+ + ++D FARA ++ P ++ +
Sbjct: 244 EIEAVLADLSNQLLPYMEELASNQSVLAQLDFIFARAALSRHYKCSEPSFNTNGY----- 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
INI+ +HPLL +P K VPI+I +
Sbjct: 299 -INIKDGRHPLL---------------DPQKV--------------------VPINIHLG 322
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+
Sbjct: 323 KEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSI 382
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV ILE SL L DE+G+GTDP+EG ALA ++L +L + +
Sbjct: 383 EQSLSTFSAHMTNIVSILEQADSHSLCLFDELGAGTDPTEGAALAIAVLTFLHNMKCRTM 442
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EFS+ETL+PTYR+L G G SNA I++ +G II
Sbjct: 443 ATTHYSELKVFALTTPGVENACCEFSVETLQPTYRLLIGIPGKSNAFAISRKLGLPEFII 502
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A R E ++ L E R +E + + A++ L +E +
Sbjct: 503 DDA-----RTHLESSDEAFEDVLTHLEESRVTIEKEQAEIQAYKAQVAQLKARLEQKEGR 557
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 565
LD + + ++ Q+ L AK D +++ N+L ++S + K+ E A +
Sbjct: 558 LDEQKEKYMREAREEAQRILREAKETADKTIKNI-NKLAESSG-----VAKQLEEERARL 611
Query: 566 VEAHRP-DDDFSVSETN-----TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 619
E + D + S+ + S + G+ V V S+ K TV +P + VQ
Sbjct: 612 REELKKVDQNLSIKKEKDPKKVVSPKSLHIGDSVMVLSMNLK-GTVSTLPNAKGDLYVQM 670
Query: 620 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 679
G +R V ++ I + A P L K +++GS +++ SK+
Sbjct: 671 GILRSLVNIKDLELI-----EEATVSGPNLDK----KRTGSG-----------KIKMSKS 710
Query: 680 -----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 732
++L GM +EA LD L A + V+HG GTG +K V L+
Sbjct: 711 FSVSPEINLIGMTTDEAVSILDKYLDDAYLAHLPQVRVVHGRGTGALKAAVHRRLKQLKY 770
Query: 733 VAKY 736
V +Y
Sbjct: 771 VKEY 774
>gi|332653476|ref|ZP_08419221.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332518622|gb|EGJ48225.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 789
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 343/715 (47%), Gaps = 94/715 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
+ D AS +L IR + + +L+K+ + Q+ + + +IT R R V +K+ H
Sbjct: 144 LADSASSELASIRRHMRATEAKVRDILQKLISS-NQSKYLQESIITIRSDRYVVPVKSEH 202
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K +P G+ +VS+SG+T+F+EP G V+ NN L E E IL+ L+A+ A +
Sbjct: 203 KNAIP-GLVHDVSASGSTFFIEPMGVVKANNELRELLAKEKKEIERILAELSAQCAAHKE 261
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
+I ++ +D FAR + M+G P LS D + + +HPLL
Sbjct: 262 DILEDYQLLVWLDGIFARGQLSLKMEGSQPKLS-------DKYLRLRKARHPLL------ 308
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
D + + VP D+++ ++ITGPNTGGKT
Sbjct: 309 --------------DKKKA---------------VPNDLELGDTFDTLMITGPNTGGKTV 339
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM++ GL++PA + FD +L+DIGD QS+ Q+LSTFS H++ IV IL
Sbjct: 340 TLKTIGLITLMAQCGLHIPAGADSTVRIFDRVLSDIGDEQSIAQSLSTFSSHMTNIVGIL 399
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
E +L+L+DE+G+GTDP EG ALA +I++ R TTHYA+L
Sbjct: 400 EEADDRTLILLDELGAGTDPVEGAALAAAIIESARGMGAAVAATTHYAELKVYAMTTPGV 459
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
ENA+ EF++ETL PTYR++ G G SNA I++ +G II++A R + + R
Sbjct: 460 ENASCEFNVETLAPTYRLILGIPGKSNAFAISRRLGLPEYIIEKAAA-----RLDAENVR 514
Query: 464 KSELYQSLMEERRKLESQARTAASLHAEIMDL------YRE-IEDE-AKDLDRRAAHLKA 515
++ L ++R+++E++ A L E+ YRE +E E AK +++ A +A
Sbjct: 515 FEDVLTRLDQQRQEMEAERAEAKRLKLEMEQSASKAREYREKLEAERAKVVEKAQAEARA 574
Query: 516 -KETQQVQQELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPD 572
E + +L A+++ QD + Q+ D+ A E L+ E+E I
Sbjct: 575 IIEEARAASDLALAELKEIKKRQDKLDWQQVNDSRA-EARRLLNEAERNIGGPA------ 627
Query: 573 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
E + G+ V + +G K ATV+ V D T+ +Q G +++ K++ +R
Sbjct: 628 ---QEPEAPPPTRDAAVGDTVELLKMGTK-ATVLSV-NKDGTLQLQAGILKISAKQSEVR 682
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
+ A R ++ R + + +DLRGM +EA
Sbjct: 683 VVEGETETQKATRKIIARAERTIRTAAVP-----------------SEIDLRGMMTDEAV 725
Query: 693 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
++ L A + +IHG GTG V+ V L+ V + P YG
Sbjct: 726 MAVERFLDTAMMGKLETVTIIHGKGTGAVRNAVRSYLKRSRYVKAFR---PGRYG 777
>gi|291535463|emb|CBL08575.1| MutS2 family protein [Roseburia intestinalis M50/1]
Length = 808
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 216/744 (29%), Positives = 332/744 (44%), Gaps = 87/744 (11%)
Query: 25 FLTELEEKIGFCIDCKLLI-----ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 79
F ++E C + + I I D AS L IR + + + + + +
Sbjct: 135 FFDQIEPLTPLCDEIRRCILSEDEIADDASSTLRSIRKSMRGMNDKIRAQMNSMINNTTT 194
Query: 80 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 139
+ +IT R R C+ +KA K +P G+ + SSSG+T F+EP V NN L
Sbjct: 195 RSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPLAVVNLNNEYKAL 253
Query: 140 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E E IL+ L+ A ++ + + E+D FA+A FAQ +GV P ++
Sbjct: 254 LIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQTYNGVAPTFNT-- 311
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D INI+ +HPLL + VP
Sbjct: 312 ----DGRINIKKGRHPLLDAKKV-----------------------------------VP 332
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
ID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA L F+ + ADI
Sbjct: 333 IDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERSELGIFEEVFADI 392
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG ALA SIL L+
Sbjct: 393 GDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGAALAISILSKLKL 452
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
+ TTHY++L + + ENA EF +E+L PTYR+L G G SNA I+ +G
Sbjct: 453 YGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPGKSNAFAISTKLG 512
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
II+ A+ R +L L + R +E + EI L ++
Sbjct: 513 LGEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQYKEEIQKLKEQL 567
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
E + + LD + + +Q + AK D +++F N+ A A ++ + KE
Sbjct: 568 EQKQERLDASRDKILREANEQAYNIIKEAKDLADETIRNF-NKYGTAHA-PVSEMEKERT 625
Query: 560 SAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+ A + D + + + + G++V V S+ TV +P + V
Sbjct: 626 KLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTVHSLPNAKGDLYV 684
Query: 618 QYGKMRVRVKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
Q G +R V N++ P SK+ G G+ + S
Sbjct: 685 QMGILRSLVNINDLILLEEETSPTSKK------------------YGRTGAGKIKMSKSA 726
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
V T N L G +EA LD L A + ++HG GTG ++ V L+
Sbjct: 727 SVSTEIN---LIGKTTDEAIALLDKYLDDAYLAHIPSVRIVHGKGTGALRNAVQAHLKRL 783
Query: 731 PRVAKYE--QESPMNYGCTVAYIK 752
V + + + G T+A K
Sbjct: 784 KYVKSFHLGEYGEGDAGVTIAEFK 807
>gi|257066824|ref|YP_003153080.1| MutS2 family protein [Anaerococcus prevotii DSM 20548]
gi|256798704|gb|ACV29359.1| MutS2 family protein [Anaerococcus prevotii DSM 20548]
Length = 781
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 227/778 (29%), Positives = 360/778 (46%), Gaps = 141/778 (18%)
Query: 3 EQECGNIFHRYSPLLELLKN---CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 59
+++ G+IF R S + + LKN + + E E I D AS L IR ++
Sbjct: 111 DRKIGDIFSRIS-INDFLKNEIDRSIINEEE-------------IADSASSTLRNIRRQK 156
Query: 60 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 119
+R ++ L + +++ R R V +K + + L+ GI + SSSG
Sbjct: 157 QRKEADIRIKLNSYITNSKYDDALQDKVVSVRDGRYVVPVKTNKRALIG-GIVHDKSSSG 215
Query: 120 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKSEREIKYLMDRVL--EI 175
T F+EP VE NN +L + EI EE I +L + +A+ +++ L ++ L I
Sbjct: 216 NTLFIEPGAIVELNN---QLRDLEIKEEDEIRRILDRLSRLAQG-FDVELLENQKLIARI 271
Query: 176 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 235
D A++ FA + PI++ + V S+ +HPLL G
Sbjct: 272 DFLQAKSRFAIENEYSLPIITDEKKVDLKSA------RHPLLPGKV-------------- 311
Query: 236 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 295
VPID+++ + ++ITGPNTGGKT S+KT+GL S M+
Sbjct: 312 ----------------------VPIDVRIGGDYTTLIITGPNTGGKTVSLKTVGLISAMA 349
Query: 296 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 355
+ L++PA +L FD I DIGD QS+E +LSTFS ++ IVDIL+ + SLVL+D
Sbjct: 350 QTALFIPAYEGSKLCVFDDIFLDIGDTQSIEMSLSTFSASLTNIVDILKNSTENSLVLLD 409
Query: 356 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 415
EIGSGTDP EG ALA SIL L + + TTHY++L + + NA+ EF ++TL
Sbjct: 410 EIGSGTDPVEGAALAISILNSLTQKKVMTFSTTHYSELKYYAVETSGVMNASVEFDVDTL 469
Query: 416 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLME 473
PTY++ G+ G SNA I+K +G +I+ A+ L+ + + E + + +
Sbjct: 470 SPTYKLEIGTPGKSNAFEISKRLGLPYEILNNAKNLIGDDTKNINKILAEIEEDKKEIED 529
Query: 474 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR----RAAHLKAKETQQVQQELNFAK 529
+ +++ES R A + E+ + + ++ + +D+ R +A + K ++ Q L AK
Sbjct: 530 KNKEIESYKREIAKIRNELKEKSKRLDQKEEDILREAEDKANSILDKANKRSQDMLKEAK 589
Query: 530 VQIDTVVQDFENQLRDASADEIN-SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 588
++R+A+ +I+ SL K +E R + E+ + + +
Sbjct: 590 ------------KMRNANTSDIDRSLNKIRHEYKEGRIE--RKGEGLYTKESKNAPDSLK 635
Query: 589 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG--KMRVRVK-----------KNNIRPIP 635
G+ V + L +K A V+E P + VQ G KM +K + NIR +
Sbjct: 636 VGDTVLIAGLNEK-AEVIEAPDKKGNIKVQMGILKMDSNIKNVSKIKGDNQTEKNIRKVY 694
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
N+K+ A N +P +LDLRG R +EA L
Sbjct: 695 NTKK--AMNISP--------------------------------TLDLRGQRYDEAMRNL 720
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVA 749
D L A S +IHG GTG + + V EIL R+ Y + YG T+
Sbjct: 721 DKYLDDAMLAGLSKAKIIHGKGTGALIKGVGEILEGDKRIEDYRFGDDKEGGYGVTIV 778
>gi|240146928|ref|ZP_04745529.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257200911|gb|EEU99195.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 808
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 216/744 (29%), Positives = 332/744 (44%), Gaps = 87/744 (11%)
Query: 25 FLTELEEKIGFCIDCKLLI-----ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 79
F ++E C + + I I D AS L IR + + + + + +
Sbjct: 135 FFDQIEPLTPLCDEIRRCILSEDEIADDASSTLRSIRKSMRGMNDKIRAQMNSMINNTTT 194
Query: 80 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 139
+ +IT R R C+ +KA K +P G+ + SSSG+T F+EP V NN L
Sbjct: 195 RSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPLAVVNLNNEYKAL 253
Query: 140 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 199
E E IL+ L+ A ++ + + E+D FA+A FAQ +GV P ++
Sbjct: 254 LIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQTYNGVAPTFNT-- 311
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
D INI+ +HPLL + VP
Sbjct: 312 ----DGRINIKKGRHPLLDAKKV-----------------------------------VP 332
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
ID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA L F+ + ADI
Sbjct: 333 IDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERSELGIFEEVFADI 392
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG ALA SIL L+
Sbjct: 393 GDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGAALAISILSKLKL 452
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
+ TTHY++L + + ENA EF +E+L PTYR+L G G SNA I+ +G
Sbjct: 453 YGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPGKSNAFAISTKLG 512
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
II+ A+ R +L L + R +E + EI L ++
Sbjct: 513 LSEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQYKEEIQKLKEQL 567
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
E + + LD + + +Q + AK D +++F N+ A A ++ + KE
Sbjct: 568 EQKQERLDASRDKILREANEQAYNIIREAKDLADETIRNF-NKYGTAHA-PVSEMEKERT 625
Query: 560 SAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+ A + D + + + + G++V V S+ TV +P + V
Sbjct: 626 KLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTVHSLPNAKGDLYV 684
Query: 618 QYGKMRVRVKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
Q G +R V N++ P SK+ G G+ + S
Sbjct: 685 QMGILRSLVNINDLILLEEETSPTSKK------------------YGRTGAGKIKMSKSA 726
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
V T N L G +EA LD L A + ++HG GTG ++ V L+
Sbjct: 727 SVSTEIN---LIGKTTDEAIALLDKYLDDAYLAHIPSVRIVHGKGTGALRNAVQAHLKRL 783
Query: 731 PRVAKYE--QESPMNYGCTVAYIK 752
V + + + G T+A K
Sbjct: 784 KYVKSFHLGEYGEGDAGVTIAEFK 807
>gi|169824561|ref|YP_001692172.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687754|sp|B0S1P2.1|MUTS2_FINM2 RecName: Full=MutS2 protein
gi|167831366|dbj|BAG08282.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 783
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR +++ EN+ + + + QA + + ++T R R + +K SH
Sbjct: 146 ISDNASRNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSH 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + SSSG T ++EP VE NN L E E IL ++ + +
Sbjct: 204 KSSFK-GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKD 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 263 SIFVDQDVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI I + + +VITGPNTGGKT
Sbjct: 316 ----------------------------------VPISIYLGDDYNTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+
Sbjct: 342 TLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIV 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
++ SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L +
Sbjct: 402 NNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
+N + EF + TL PTY++ G G SNA I++ +G D II A++++ Q+ +
Sbjct: 462 KNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDK 515
Query: 464 KSELYQSLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDR 508
E S +E ++K E + R + D Y +EIE +EAK+ +
Sbjct: 516 DFEDVLSDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NA 574
Query: 509 RAAHLKAK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAI 565
+++AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 575 NEIYMRAKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-- 624
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
++ET+ Q G++V + + ++ T+V P +LVQ G +++
Sbjct: 625 -----------LNETSKKQ-KLQLGDEVEILGI-EQQGTIVSEPDKKGDLLVQVGILKIN 671
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
N++ I K++E QS + S + + K+ +DLRG
Sbjct: 672 ANVKNLKKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRG 712
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SP 741
+EEA ++LD I + +IHG GTG++++ + E LR+ RV K E +
Sbjct: 713 KNIEEAIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNE 772
Query: 742 MNYGCTVAYIK 752
G T Y+K
Sbjct: 773 GGLGATFIYLK 783
>gi|269123412|ref|YP_003305989.1| MutS2 family protein [Streptobacillus moniliformis DSM 12112]
gi|268314738|gb|ACZ01112.1| MutS2 family protein [Streptobacillus moniliformis DSM 12112]
Length = 779
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 207/764 (27%), Positives = 363/764 (47%), Gaps = 111/764 (14%)
Query: 6 CGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM-- 63
N+ +Y + + K+ N L ++E I +D I D AS L LI +++N+
Sbjct: 106 AKNVRDKYKQIWNIFKDLNDLKDIETFIDEIVDDNGNI-KDNAS--LTLIDIRKQKNIIF 162
Query: 64 ----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 119
E ++L+ Q I +ITKR R + IK K L+ GI + SS+G
Sbjct: 163 NNIKEKFEALINNKDTQ----RAIQDKIITKRNERYVIAIKTDFKGLIR-GIEHDRSSTG 217
Query: 120 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLA 178
+T F+EP V NN ++R + EE + L EI ++ E +K D + ID
Sbjct: 218 STSFIEPLNVVSLNN-KLREYEAREKEEIRKILLRLTEILRARLEDLKIAQDILERIDFL 276
Query: 179 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 238
A+ +A P + S + I +E +HP +
Sbjct: 277 NAKVEYALETKSNIPKIVSHT------KIYLEDARHPFIN-------------------- 310
Query: 239 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 298
D VP+ ++ +V++ITGPNTGGKT ++K GL +LM+ +G
Sbjct: 311 ---------------KDRVVPLTFDLDENYKVMLITGPNTGGKTVTLKVAGLFTLMALSG 355
Query: 299 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 358
L +PA + + FD +L+DIGD QS+EQNLS+FS H+ I +IL + +SLVL+DE+G
Sbjct: 356 LAIPASDKSIIGMFDNVLSDIGDEQSIEQNLSSFSSHVKSISEILNEATSKSLVLLDELG 415
Query: 359 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 418
SGTDPSEG A A +I+ ++ R A++TTHY+++ ++A+ EF+ ETL PT
Sbjct: 416 SGTDPSEGSAFAMAIIDHILQRKIKALITTHYSEVKAHAYTHDNIKSASMEFNSETLSPT 475
Query: 419 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 478
YR+L G G+SNAL IA G D++II A+ + E ++ + S+ E+ L
Sbjct: 476 YRLLVGIPGESNALIIASKYGIDKEIIDNARSYISEDNREVEK-----MLASIKEKNDNL 530
Query: 479 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 538
E+ ++ E+ L +E+ +E + + + A + KE + ++ A + D ++D
Sbjct: 531 EA-------MNIEVEKLKQELANEKSNYENKIAEFE-KEKNNILKD---AYKKADDYIKD 579
Query: 539 FENQLRDASADEINS---------LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 589
+N+ + A D+INS ++++ + I +E + ++ T S +
Sbjct: 580 MQNKAK-ALVDKINSDNVKKEEAKTLQKNINMIRQYIEDSKKENIVEKKYT-KSDLNFEI 637
Query: 590 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 649
E+V +K+L +++ V+ + + +++ VQ G +++ V ++ I K N
Sbjct: 638 NEEVLIKTL-NQVGKVLRIIPEKNSLQVQAGILKITVSLEDVTKIAKKKNNRLTNVI--- 693
Query: 650 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 707
+V K +D+RG EEA +++I A +
Sbjct: 694 ---------------------NAKVTHVKGEIDVRGKIAEEAIDEIEIYFNRAILNGFTT 732
Query: 708 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 751
+ ++HG GT ++++++ + L+ V++++ P G V +
Sbjct: 733 VAIVHGKGTMILRKKIHDYLKKSVYVSEFKDGHPSEGGLGVTIV 776
>gi|227534485|ref|ZP_03964534.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187884|gb|EEI67951.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 786
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 208/685 (30%), Positives = 332/685 (48%), Gaps = 93/685 (13%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
Q+ + P++T R R + +KA ++ G+ + S++G T F+EP+ V NN
Sbjct: 179 QSKYLSDPIVTIRDDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLRE 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
+E+AE IL+ L+ E+A +IK + D A+A A+ P+
Sbjct: 238 AQLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL---- 293
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
VS D+ + + +HPL+ +P K VG+
Sbjct: 294 --VSADNDVLLRDARHPLI---------------DPHK--------VVGN---------- 318
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
DI + + + +VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + AD
Sbjct: 319 --DIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFAD 376
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQNLSTFS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL +
Sbjct: 377 IGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVG 436
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ V TTHY +L + NA+ EF +TL+PTYR+L G G SNA +I+ +
Sbjct: 437 EVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARL 496
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAE 491
G I++RA+ ++ H + + L ++R+ E+ Q A S+H E
Sbjct: 497 GLPSVIVERAKSMI-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDE 551
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADE 550
+ Y++ E R A +AK+ + ++ + + D +++ + QL + +
Sbjct: 552 LAAAYKKFTTE-----RDAQLQQAKD--KANTLVDKTQTKADKIIKQLRQMQLTNPGTVK 604
Query: 551 INSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 608
N LI +A A+ + H+ P + G++V V S D+ T++E
Sbjct: 605 ENQLI----AAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE- 658
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
D VQ G ++++V + + I SK+ A P ++ SG S
Sbjct: 659 QFDKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS----- 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
GP +LDLRG R ++A LD I A + +IHG+GTG ++ V +
Sbjct: 706 --GP-----STTLDLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQY 758
Query: 727 LRNHPRVAKYEQESPMNYGCTVAYI 751
L+ + +V Y +P N G + A I
Sbjct: 759 LKRNRQVKTYG-FAPQNAGGSGATI 782
>gi|218296241|ref|ZP_03496997.1| MutS2 family protein [Thermus aquaticus Y51MC23]
gi|218243313|gb|EED09843.1| MutS2 family protein [Thermus aquaticus Y51MC23]
Length = 752
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 224/765 (29%), Positives = 362/765 (47%), Gaps = 149/765 (19%)
Query: 18 ELLKNCNFLTELEEKIG----FCIDCKLLI-----ILDRASEDLELIRAE----RKRNME 64
ELL N L+++ IG F + + + + D AS L+ IR E R+ +
Sbjct: 98 ELLPLQNALSQVAAGIGDHGAFLLRVRKALDEEGAVRDEASPRLKQIRQELHPLRQEILN 157
Query: 65 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 124
L +L+ + + +T RR R C+ ++A + +P G+ L+ S SGAT F+
Sbjct: 158 RLYALMDR------HKEAVQDRFVTLRRERYCIPVRAGMAHRIP-GLLLDESESGATLFI 210
Query: 125 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 184
EP V+ NN L E E IL L+ +A+ + ++ + +DL A+A
Sbjct: 211 EPLSVVKLNNRLYALRLQEEEEVNRILRELSQRLAEDP-GVPGTLEALALLDLVQAQAAL 269
Query: 185 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 244
++ + S F +E HPL+ NP+K+ E
Sbjct: 270 SRDL--------GLSRPRFGEGYALEEAFHPLI--------------ENPVKNSFALDET 307
Query: 245 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 304
R+++I+GPN GGKTA +KTLGLA LM+++GL++ AK
Sbjct: 308 H-----------------------RLLLISGPNMGGKTALLKTLGLAVLMAQSGLFVAAK 344
Query: 305 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 364
L W D + ADIGD QSL+++LSTF+GH+ R+ ++LE + SLVLIDE+GSGTDP
Sbjct: 345 RAT-LAWPDRVYADIGDEQSLQESLSTFAGHLKRLKEMLEGATERSLVLIDELGSGTDPE 403
Query: 365 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 424
EG AL+ +IL+ L R +VTTH + L NA+ F L TLRPTY ++ G
Sbjct: 404 EGAALSKAILEALLARGVKGMVTTHLSPLKAFAQGREGIMNASMRFDLATLRPTYELVLG 463
Query: 425 STGDSNALNIAKSIGFDRKIIQRA----------QKLVERLRPERQQHRKSELYQSLMEE 474
G S AL IA+ + ++++RA + L+E+L ER +LMEE
Sbjct: 464 VPGRSYALAIARRLALPEEVLRRAEALLPEGGRLEALLEKLEAER---------LALMEE 514
Query: 475 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 534
+R L+ A +L E++ + +E R LKA E ++V+Q L +Q++
Sbjct: 515 KRHLQKALEEAEALKRELLAREKGFAEE------RQRRLKALE-EEVRQRL----LQVEA 563
Query: 535 VVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 593
++ + R + D + L+ A+ E + + P G+ V
Sbjct: 564 EIKAIREKARTEGKRDALRELM--------ALKERY---AKKAPPPPPPPGLAP--GQAV 610
Query: 594 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 653
V SLG + ++E+ G++ LVQ G +++ +K ++P+ ++ A A LR ++
Sbjct: 611 EVPSLGKR-GRLLEIRGEE--ALVQVGPLKMSLKAAELKPL----QEEATPKALPLRPRR 663
Query: 654 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSV----LF 709
E ++ +DLRG+ VEEA ++D AL E+R++ L
Sbjct: 664 EVKE-----------------------VDLRGLTVEEALLEVDSALE--EARALGLPTLR 698
Query: 710 VIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYIK 752
++HG GTG +++ + E+LR RV + P +G TV +K
Sbjct: 699 LLHGKGTGALRQAIREVLRRDKRVEAFADAPPNEGGHGVTVVVLK 743
>gi|379705968|ref|YP_005204427.1| Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682667|gb|AEZ62956.1| Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 778
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 211/725 (29%), Positives = 342/725 (47%), Gaps = 119/725 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R + + +S +++V I QA + + LI R R + +K S++
Sbjct: 147 ASHELDRIR----RQINHDESRVRQVLQDILKKQADHLTETLIASRNGRAVLPVKNSYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I
Sbjct: 203 RIS-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPYTNII 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +D A+ F Q V P LS+ D ++ + +HPLL+
Sbjct: 262 RNNAWVLGHLDFVRAKFLFMQENKAVVPQLST------DKTVQLLQARHPLLIN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D+ E V+VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLHFLDELTVIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IVDIL
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVDILAA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
++SLVL+DE+G+GTDP EG +LA SIL++LR + TTHY +L + EN
Sbjct: 399 ADKDSLVLVDELGAGTDPQEGASLAISILEHLRLTQVKTMATTHYPELKAYGIETEFVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERL 455
A+ EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 459 ASMEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEVIVNEAERLTDSDTDVNRIIERL 518
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ + RK ++ +++E + + + LY E AKD + A KA
Sbjct: 519 EEQTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKA 568
Query: 516 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 575
+E ++ A + + ++++ ++ + I E++S + + P+ D
Sbjct: 569 QEI------VDKAMAESEEILKNLHHKASLKPHEVI-----EAKSQLKKLA----PEVDL 613
Query: 576 SVSETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 632
S ++ + P+ G+ + V + G + + + + Q G +++ +K++
Sbjct: 614 SKNKVLKKAKKLRAPRVGDDIIVTAYGQRGTLINQTK--NGKWEAQVGLIKMTLKEDEF- 670
Query: 633 PIPNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
L K QE+ Q + S GPR + LDLRG R
Sbjct: 671 ---------------SLVKVQEEEQKPKKKQVHVVKKSKKSAGPRAR-----LDLRGKRY 710
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNY 744
EEA +LD I A + + + +IHG+GTGV++E V + LR H + Y ++
Sbjct: 711 EEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGS 770
Query: 745 GCTVA 749
GCT+A
Sbjct: 771 GCTIA 775
>gi|358466142|ref|ZP_09175997.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
gi|357069345|gb|EHI79268.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
Length = 778
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 211/773 (27%), Positives = 368/773 (47%), Gaps = 138/773 (17%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L + + N L +E+ I I+ + I D AS DL IR +K N+ +
Sbjct: 112 KYKQLRDTIGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFE 170
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
++ + A + +IT+R RM +K K L+ GI + SSSG T F+EP V
Sbjct: 171 ELFDEPSLANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVS 229
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDG 190
NN L E E IL L AE+ ++ R+ I + D+ + +D+ A++ +A +D
Sbjct: 230 LNNKMRELETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKAMYLDILNAKSIYA--VDN 286
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
C I + VS +++E +HP +
Sbjct: 287 KCEIPT----VSNREVLSLEKARHPFI--------------------------------- 309
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++
Sbjct: 310 --DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIG 367
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
+F+ + ADIGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A
Sbjct: 368 FFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFA 427
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SN
Sbjct: 428 MAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGVETASMEFNTDTLSPTYRLLVGIPGESN 487
Query: 431 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEERRKL 478
AL IA+ +G II +A +K++E ++ + Q+ E + L EE R L
Sbjct: 488 ALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-L 546
Query: 479 ESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQ 523
+ + +L E I Y E E ++ +A+ L K + +Q+Q+
Sbjct: 547 DRERAKQETLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQK 606
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
LN +++ ++E ++ +V+ + +F V
Sbjct: 607 NLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV------ 637
Query: 584 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 643
G++V VKS+ ++ A ++++ ++ VQ G +++ V
Sbjct: 638 ------GDRVFVKSI-NQFANILKINTSKESASVQAGILKLEV----------------- 673
Query: 644 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 701
P ++ +E ++ S++++ ++ +DLRG V+E ++L+ L A
Sbjct: 674 -PFEEIKIVEEKKEKVYNVSTHKKTPV-------RSEIDLRGKMVDEGIYELETYLDRAT 725
Query: 702 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
+ ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 726 LNGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRVGGHGEGGLGCTVVTLK 778
>gi|302380376|ref|ZP_07268846.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
gi|302311866|gb|EFK93877.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
Length = 783
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR +++ EN+ + + + QA + + ++T R R + +K SH
Sbjct: 146 ISDNASRNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSH 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + SSSG T ++EP VE NN L E E IL ++ + +
Sbjct: 204 KSSFK-GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKD 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 263 SIFVDQDVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI I + + +VITGPNTGGKT
Sbjct: 316 ----------------------------------VPISIYLGDDYNTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+
Sbjct: 342 TLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIV 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
++ SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L +
Sbjct: 402 NNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
+N + EF + TL PTY++ G G SNA I++ +G D II A++++ Q+ +
Sbjct: 462 KNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDK 515
Query: 464 KSELYQSLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDR 508
E S +E ++K E + R + D Y +EIE +EAK+ +
Sbjct: 516 DFEDVLSDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NA 574
Query: 509 RAAHLKAK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAI 565
+++AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 575 NEIYMRAKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-- 624
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
++ET+ Q G++V + + ++ T+V P +LVQ G +++
Sbjct: 625 -----------LNETSKKQ-KLQLGDEVEILGI-EQQGTIVSEPDKKGDLLVQVGILKIN 671
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
N++ I K++E QS + S + + K+ +DLRG
Sbjct: 672 ANVKNLKKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRG 712
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SP 741
+EEA ++LD I + +IHG GTG++++ + E LR+ RV K E +
Sbjct: 713 KNIEEAIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNE 772
Query: 742 MNYGCTVAYIK 752
G T Y+K
Sbjct: 773 GGLGATFIYLK 783
>gi|433461376|ref|ZP_20418986.1| DNA mismatch repair protein MutS [Halobacillus sp. BAB-2008]
gi|432190203|gb|ELK47246.1| DNA mismatch repair protein MutS [Halobacillus sp. BAB-2008]
Length = 782
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 213/746 (28%), Positives = 351/746 (47%), Gaps = 102/746 (13%)
Query: 16 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLK 71
L E++ + + ELE++I CID + +D AS+ L IR++ + N E ++S +
Sbjct: 117 LREMVLGIDPMKELEDEIRHCIDENGKV-MDGASDKLRTIRSKIRTNESRVRERMESFTR 175
Query: 72 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 131
+ + + +IT R R + +K ++ + GI + SSSGAT F+EP+ V+
Sbjct: 176 SKSKMLSDS------IITIRNERYVLPVKQEYRGSI-GGIVHDQSSSGATLFIEPQTVVD 228
Query: 132 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 191
NN E E IL L+ IA+ + + + +ID FARA M
Sbjct: 229 LNNQLQEARVQEKNEVERILKELSQTIAEYNSPLYENVTILGDIDFMFARAKLGASMKAS 288
Query: 192 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 251
P ++ + + + +HPL+ +
Sbjct: 289 MPKMNDKGIIKMKQA------RHPLIPAEEV----------------------------- 313
Query: 252 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 311
VP D+++ + +VITGPNTGGKT ++K +GL +LM+++GL +PA + L
Sbjct: 314 ------VPNDVELGEDYTSIVITGPNTGGKTVTLKLVGLFTLMAQSGLQVPALDGCELAV 367
Query: 312 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 371
FD + ADIGD QS+EQ+LSTFS H++ IVDIL V SLVL DE+G+GTDP EG ALA
Sbjct: 368 FDEVFADIGDEQSIEQSLSTFSSHMTNIVDILNRVDHRSLVLFDELGAGTDPQEGAALAM 427
Query: 372 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 431
SIL + R + TTHY +L NA+ EF ++TL+PTYR+L G G SNA
Sbjct: 428 SILDEVVRRDARVIATTHYPELKAYGYNRPGVINASVEFDIQTLKPTYRLLIGVPGRSNA 487
Query: 432 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 491
I++ +G D II A+ V + SL E +R E A + E
Sbjct: 488 FEISRRLGLDESIIDDAKGHV-----GVDSQSVENMIASLEESKRGAEKDYEEAEQMLEE 542
Query: 492 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQ--LRDA 546
L E++ + +++ L K + ++ + AK +I +V+++ ++Q +++
Sbjct: 543 AEKLRNELQVKWNQFEQQREKLYEKAEAKAEKAIRKAKEEAEEIVSVIRNMKSQAGMKEH 602
Query: 547 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 606
E + +E++ + + +P + + P G++V + +L ++ T+V
Sbjct: 603 EWIEARKMFEEAQPELT----SKKPKAQPAKPKQTQKELQP--GDEVKLLTL-NQQGTIV 655
Query: 607 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 666
E G ++ VQ G M+V+ K+ ++ + K K P
Sbjct: 656 EKTGKNE-YQVQVGVMKVKAKQKDLEFV---KAKEPYKEKPM------------------ 693
Query: 667 EASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKE 721
A+ + K LDLRG R E+A ++L D LA + + S +IHG GTG ++
Sbjct: 694 -ATVKGKSFHVKAELDLRGERYEDALNRLEKYIDDALLAGYPTVS---IIHGKGTGALRT 749
Query: 722 RVLEILRNHPRVAKYEQESPMNYGCT 747
V +NH ++ + + MN G +
Sbjct: 750 GVQNFAKNHRSISGH-RAGGMNEGGS 774
>gi|417810043|ref|ZP_12456724.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
gi|335350967|gb|EGM52463.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
Length = 786
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 207/692 (29%), Positives = 327/692 (47%), Gaps = 119/692 (17%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------DMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLY 496
I+ A++L + +E+ L+ +R E + R A LH ++ +
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEITYRKYLREAEELHHDLEANF 557
Query: 497 REIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDASADEI 551
+ E + +++ +A A+ +ET++ EL K+++ V E L D +
Sbjct: 558 HQFERQKENMLEQAKEKANQIVEETKKKSDELISELRKMKMSAVSNIEEKNLIDVQG-RV 616
Query: 552 NSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
N+L +E+ ++ E H P+DD V V S G +
Sbjct: 617 NALHQETNLKKNKVLRKAKKQQELH-PNDD------------------VMVNSYGQR--G 655
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + VQ G +++++ ++++ I K + +++G+ S
Sbjct: 656 VLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPKRAGTVLKS 701
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
+ + P +LDLRG R E A +D I A + + +IHG GTG ++
Sbjct: 702 SSSSHVSP-------TLDLRGERYENAMVNVDRYIDAAVLAGYNSVTIIHGKGTGALRTG 754
Query: 723 VLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
++ L+ + V +E SP N G TV Y K
Sbjct: 755 IINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|336419167|ref|ZP_08599433.1| MutS2 protein [Fusobacterium sp. 11_3_2]
gi|336163858|gb|EGN66772.1| MutS2 protein [Fusobacterium sp. 11_3_2]
Length = 778
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 214/781 (27%), Positives = 369/781 (47%), Gaps = 154/781 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP +
Sbjct: 285 ENRCEIPTVSNKEILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V N I+ + K
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKE 686
Query: 640 K----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N P ++ +DLRG V+EA ++L
Sbjct: 687 KVYNMNTHKKTP-----------------------------VRSEIDLRGKMVDEAVYEL 717
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ L A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +
Sbjct: 718 ETYLDRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTL 777
Query: 752 K 752
K
Sbjct: 778 K 778
>gi|306832176|ref|ZP_07465330.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425615|gb|EFM28733.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 778
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 211/723 (29%), Positives = 347/723 (47%), Gaps = 115/723 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQARHPLLTN-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ A + + ++++ L D ++ + + +I E++S + + P+ D S
Sbjct: 571 I------VDKAMAESEEILKN----LHDRASLKPHEVI-EAKSQLKKLA----PEVDLSK 615
Query: 578 SETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 616 NKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF--- 670
Query: 635 PNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
L K QE+ Q + S GPR + LDLRG R EE
Sbjct: 671 -------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + + + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGRGC 772
Query: 747 TVA 749
T+A
Sbjct: 773 TIA 775
>gi|303233786|ref|ZP_07320440.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
gi|302495220|gb|EFL54972.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
Length = 783
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 213/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
I D AS +L IR +++ EN+ + + + QA + + ++T R R + +K SH
Sbjct: 146 ISDNASRNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSH 203
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
K GI + SSSG T ++EP VE NN L E E IL ++ + +
Sbjct: 204 KSSFK-GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKD 262
Query: 164 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 223
I D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 263 SIFVDQDVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV- 315
Query: 224 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 283
VPI I + + +VITGPNTGGKT
Sbjct: 316 ----------------------------------VPISIYLGDDYNTLVITGPNTGGKTV 341
Query: 284 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 343
++KT+GL +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+
Sbjct: 342 TLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIV 401
Query: 344 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 403
++ SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L +
Sbjct: 402 NNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYV 461
Query: 404 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 463
+N + EF + TL PTY++ G G SNA I++ +G D II A++++ Q+ +
Sbjct: 462 KNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDK 515
Query: 464 KSELYQSLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDR 508
E S +E ++K E + R + D Y +EIE +EAK+ +
Sbjct: 516 DFEDVLSDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NA 574
Query: 509 RAAHLKAK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAI 565
+++AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 575 NEIYMRAKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-- 624
Query: 566 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 625
++ET+ Q G++V + + ++ T+V P +LVQ G +++
Sbjct: 625 -----------LNETSKKQ-KLQLGDEVEILGI-EQQGTIVSEPDKKGDLLVQVGILKIN 671
Query: 626 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 685
N++ I K++E QS + S + + K+ +DLRG
Sbjct: 672 ANVKNLKKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRG 712
Query: 686 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SP 741
+EEA ++LD I + +IHG GTG++++ + E LR+ RV K E +
Sbjct: 713 KNIEEAIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNE 772
Query: 742 MNYGCTVAYIK 752
G T Y+K
Sbjct: 773 GGLGATFIYLK 783
>gi|332798676|ref|YP_004460175.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696411|gb|AEE90868.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
Length = 787
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 203/741 (27%), Positives = 363/741 (48%), Gaps = 111/741 (14%)
Query: 18 ELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 75
E++ + LEEKI I D + I D AS L IR ++K +++ + L ++ +
Sbjct: 119 EIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLSSIRRQKKNLAQSIRNKLNEIIS 175
Query: 76 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 135
+ + P++T R+ R V +K + + G+ + S+SGAT ++EP ++ NN
Sbjct: 176 SPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIHDQSASGATLYIEPMAVMQMNNE 234
Query: 136 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 195
+L E E IL + ++ ++ I + + +D A+AG++ + G PI
Sbjct: 235 LRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLAHLDFIMAKAGYSLDIKGTEPIF 294
Query: 196 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 255
+++ +++ I+G +HPLL G
Sbjct: 295 NNRGYINI-----IQG-RHPLLKGEV---------------------------------- 314
Query: 256 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 315
VP+D+ + E +++ITGPNTGGKT ++KT+GL LM+++GL+LPA+ + F+ +
Sbjct: 315 --VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFILMAQSGLHLPAQEGTEVSIFEDV 372
Query: 316 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 375
ADIGD QS+EQ+LSTFS H+ I +IL+L +++SL+++DE+G+GTDP+EG ALA +IL
Sbjct: 373 FADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLIILDELGAGTDPTEGAALAMAILN 432
Query: 376 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 435
YL ++ + TTHY++L ENA+ EF ++TL PTYR+ G G SNA IA
Sbjct: 433 YLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQTLSPTYRLTIGIPGKSNAFEIA 492
Query: 436 KSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 493
K +G ++++ + L+ E L+ E +L + ++ K E + +L E +
Sbjct: 493 KRLGLKQEVVDLGKSLMAEESLKLE-------DLLTHIELQKNKAEEEREELRALKTEYL 545
Query: 494 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV-----QIDTVVQDFENQ----LR 544
+E+E + L R K E +++ L + QI ++D E + +R
Sbjct: 546 KKIDRLEEEQQKL--RIQQEKIVEKAKMKARLLLDNIEREAAQIIESLKDAETENQIHIR 603
Query: 545 DASADEINSLIKESESAI-----AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLG 599
+ + ++ S +++++ + A I+ A ++ P G +V + L
Sbjct: 604 NKAVEQARSWLRKTDEKLQDSKNALIINA---------AKKYKKPLKP--GLKVKIAGLN 652
Query: 600 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 659
+ ++ + + VQ G M+V V ++ PI + ++++ R S
Sbjct: 653 QE-GYILSLDEALKSAQVQVGIMKVNVPAESLIPIEQIE-----------FEEEKSRYSS 700
Query: 660 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMG 715
A S +E S +DLRG+ V+EA + LD A+ +R L IHG G
Sbjct: 701 IAMSKAKEIS---------TEIDLRGLTVDEALAEVDNYLDDAMMAGVARVTL--IHGKG 749
Query: 716 TGVVKERVLEILRNHPRVAKY 736
TG +++ + ++L+ + +
Sbjct: 750 TGALRQGITDMLKTRSDIKAF 770
>gi|336065010|ref|YP_004559869.1| DNA mismatch repair protein MutS2 [Streptococcus pasteurianus ATCC
43144]
gi|334283210|dbj|BAK30783.1| DNA mismatch repair protein MutS2 [Streptococcus pasteurianus ATCC
43144]
Length = 778
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 349/726 (48%), Gaps = 115/726 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQARHPLLTD-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKARAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ A + + ++++ L D ++ + + +I E++S + + P+ D S
Sbjct: 571 I------VDKAMTESEEILKN----LHDRASLKPHEVI-EAKSQLKKLA----PEVDLSK 615
Query: 578 SETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 616 NKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF--- 670
Query: 635 PNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
L K QE+ Q + S GPR + LDLRG R EE
Sbjct: 671 -------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + + + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGC 772
Query: 747 TVAYIK 752
T+A ++
Sbjct: 773 TIANLR 778
>gi|289766107|ref|ZP_06525485.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
gi|289717662|gb|EFD81674.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
Length = 778
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 211/777 (27%), Positives = 374/777 (48%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E++ N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLREMIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S +E +HP +
Sbjct: 285 ENRCEIPTVSNREILS------LEKARHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEV------------- 673
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
P ++ +E ++ +++++ ++ +DLRG V+EA ++L+ L
Sbjct: 674 -----PFDEIKVVEEKKEKVYNMNTHKKTPV-------RSEIDLRGKMVDEAVYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|153854055|ref|ZP_01995388.1| hypothetical protein DORLON_01379 [Dorea longicatena DSM 13814]
gi|149753437|gb|EDM63368.1| MutS2 family protein [Dorea longicatena DSM 13814]
Length = 792
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 343/728 (47%), Gaps = 99/728 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRMCVGIK 100
I D AS L+ IR R+M ++ + + + + +IT R R C+ +K
Sbjct: 145 ISDDASSTLKQIR----RSMNQINDKVHSTLSSLVNGSLRTYLQDAIITMRGDRYCIPVK 200
Query: 101 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 160
A ++ + G+ + S++G+T F+EP V+ NN L E E IL+ L+A++A+
Sbjct: 201 AEYRSQVS-GLIHDQSATGSTLFIEPMSVVKLNNDLKELYGKEQEEIQVILARLSADVAE 259
Query: 161 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
I+ + E+D FAR A M+ PI +++ I+I +HPLL
Sbjct: 260 YIDSIRTDYKVMTELDFIFARGNLAINMNASKPIFNTEGR------IHIREGRHPLLDKK 313
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
+ VPI + + ++++TGPNTGG
Sbjct: 314 KV-----------------------------------VPITVTLGDTFDLLIVTGPNTGG 338
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT S+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 KTVSLKTVGLFTLMGQAGLHIPALDRSELAIFENVYADIGDEQSIEQSLSTFSSHMTNIV 398
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
L+ V SLVL DE+ +GTDP+EG ALA +IL YL R + TTHY++L
Sbjct: 399 SFLKHVDEHSLVLFDELNAGTDPTEGAALAIAILSYLHQRGIRTMATTHYSELKVFALST 458
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-KLVERLRPER 459
ENA EF +ETL PTYR+L G G SNA IA +G II+ A+ L E + E
Sbjct: 459 PGVENACCEFDVETLSPTYRLLIGIPGKSNAFAIAGKLGLPDYIIEDAKTHLTE--QDES 516
Query: 460 QQHRKSELYQS---LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA---AH- 512
+ ++L S + +E+ ++E R A L E ++E++ + R A AH
Sbjct: 517 FEDLLTDLETSKRTIRKEQEEIEHYKRELARLEEETRQKRDKLEEQRDRIIREANEKAHE 576
Query: 513 --LKAKET--QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 568
AKET + ++ F K I V + E + R+ ++N+ ++ +A
Sbjct: 577 ILADAKETADETMRNFHKFGKANIS--VAEMEKE-RERLRKKMNATQNSMKTDTKKPKKA 633
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
++P D + GE V V S+ + +V +P V VQ G +R V
Sbjct: 634 YKPSD-------------FKLGESVKVLSM-NLTGSVTSLPDSKGNVTVQMGILRSTVNI 679
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+++ I + AP + RQ+G + G + S ++L G V
Sbjct: 680 SDLEII---------DEAPAYSFAKRTRQTGKG-----KVKMGKSLAISPE-INLLGKTV 724
Query: 689 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES--PMNY 744
+EA +LD L A S + ++HG GTG ++ + + L+ V + + +
Sbjct: 725 DEAIAELDKYLDDASLAHLSSVRIVHGKGTGALRAGIHKYLKRQKHVKSFRLGAFGEGDA 784
Query: 745 GCTVAYIK 752
G T+A +K
Sbjct: 785 GVTIAELK 792
>gi|452975414|gb|EME75233.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sonorensis L12]
Length = 785
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 223/741 (30%), Positives = 368/741 (49%), Gaps = 98/741 (13%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE+ I CID + LD ASE L IR + + R + L+++L+ +AQ
Sbjct: 129 LSDLEKDINSCIDDHGEV-LDHASESLRGIRTQLRTLESRIRDRLEAMLRSSSAQKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +IT R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIITIRNDRFVIPVKQEYRSSY-GGIVHDQSSSGATLFIEPQVIVDMNNSLRQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
+E E IL +LT + A+ E+ + + + +D FA+A +A+ V PI+++ +V
Sbjct: 243 NEKQEIERILRMLTDKTAEHTDELFHNVKVLQTLDFIFAKAKYAKATKAVKPIVNADGYV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P +D VP D
Sbjct: 303 RLIQA------RHPLL----------------P-------------------ADQVVPND 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ E +VITGPNTGGKT ++KTLGL +LM+++GL++PA FD + ADIGD
Sbjct: 322 IELGGEYTTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPAGEGSETAVFDQVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDIL+ ++ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVYQTG 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 442 ARVIATTHYPELKAYGYNRDNVINASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
+I RA + + + + SL + +++ E++ ++ AE L+R+++
Sbjct: 502 DHLIGRA-----KAEMTAEHNEVDTMIASLEDSKKRAETELAETEAIRAEAETLHRDLKR 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KES 558
+ + + L + Q+ +++ A + D ++Q D A + + LI K
Sbjct: 557 QISEWQEKKDRLYEEAEQKAAEKVREAVKEADEIIQSLRMIKEDHKAFKDHELIDAKKRL 616
Query: 559 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
E A+ + + +P + + + P G++V V + G K T++E D + VQ
Sbjct: 617 EEAVPSFEKTKKP----VQKKMDKRALKP--GDEVKVLTFGQK-GTLLE-KTDANEWNVQ 668
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G ++++VK+ ++ + + AP KQQ + + + Y ++
Sbjct: 669 IGILKMKVKEKDLEFLKS---------APEPEKQQ-------SIAKVKGKDYHVSLE--- 709
Query: 679 NSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
LDLRG R E A H++ D LA + S +IHG GTG +++ V ++L++H V
Sbjct: 710 --LDLRGERYENALHRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNV 764
Query: 734 --AKYEQESPMNYGCTVAYIK 752
+++ + G T+ +K
Sbjct: 765 KNSRFGEAGEGGSGVTIVELK 785
>gi|156740089|ref|YP_001430218.1| MutS2 family protein [Roseiflexus castenholzii DSM 13941]
gi|156231417|gb|ABU56200.1| MutS2 family protein [Roseiflexus castenholzii DSM 13941]
Length = 826
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 219/756 (28%), Positives = 363/756 (48%), Gaps = 115/756 (15%)
Query: 16 LLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK----RNMENLDSL 69
L E+ + L +E+ IG I D + +LD AS L +RAE + R E L +L
Sbjct: 119 LREIAADLPALPAIEDAIGRAIGDDGQ---VLDSASPKLARLRAEVRIAFNRLQEKLHNL 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ + + +P+IT R R V +KA+H+ + G+ + S+SGAT ++EP
Sbjct: 176 IT------IHSDALQEPIITVRNGRYVVPVKATHRRAI-RGLVHDQSASGATLYIEPLTI 228
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
V+ NN +E E IL+ L+A++ I ++ + +DLAFA A +A M
Sbjct: 229 VDLNNAWREAQLAEQKEVERILAELSAQVGDHADAIVTGVESLATLDLAFAMARYAVAMR 288
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
V P + + + + +HPL+ +P +
Sbjct: 289 CVMPEIVDAPPSPDEPLLLLTAARHPLI---------------DPQQV------------ 321
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VPID+++ R+++ITGPNTGGKT ++KT GL +LM++AG+++PA + R+
Sbjct: 322 --------VPIDMRLGGSFRILLITGPNTGGKTVALKTTGLLALMAQAGMHVPAAHPSRV 373
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV----SRES--------------- 350
P F I ADIGD QS+EQ+LSTFS H++ I+ IL + + ES
Sbjct: 374 PVFKQIFADIGDEQSIEQSLSTFSSHMTNIIRILRALEGAPNEESAEAFAADPTPTEPAC 433
Query: 351 ------LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 404
LVL+DE+G+GTDP EG ALA +I++ L + L V TTHYA+L E
Sbjct: 434 AERLPALVLLDELGAGTDPVEGSALARAIIERLLELGVLGVATTHYAELKAFAYATPGVE 493
Query: 405 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 464
NA+ EF +ETL PTY++ G G SNAL IA +G +I+RA R RQ +
Sbjct: 494 NASVEFDVETLAPTYKLTIGLPGRSNALAIAARLGLSPALIERA-----RASMARQDVQV 548
Query: 465 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQVQQ 523
+L + ER ++ + A + A+ + YRE + E ++ + R + +++
Sbjct: 549 EDLLAGIHRERAAAAAELQRAMEVRAD-AEKYRERLAAELREFEARRSEAWQSARDEIEA 607
Query: 524 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 583
EL A+ + V+ ++ R S ++E+E + + + +++E +
Sbjct: 608 ELRQARSE----VRRLRDEFRSVSVS--RRWLEEAEQRLHEVRASLPETPTGALAERAVT 661
Query: 584 SFTPQF------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 637
+ Q G+ V V+S+G + ++ + ++ T VQ G R+ + ++ +
Sbjct: 662 TVVEQGPRPLHPGDVVRVRSVG-LIGEILSIDEEEQTAEVQVGGFRM---QADLAELTRE 717
Query: 638 KRKNAANPAPRLRKQQEDRQS-GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
KR + + +Q DR + S G+S P + LD+RG R +A +LD
Sbjct: 718 KRGDG-------KAEQPDRPAYESRGASI------PAPRDVSLELDMRGWRAADARDRLD 764
Query: 697 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 730
L A + +IHG GTG +++ V ++L+ H
Sbjct: 765 RYLNDAYLAGLPWVRIIHGKGTGALRQAVRDLLKEH 800
>gi|424787034|ref|ZP_18213805.1| mutS2 family protein [Streptococcus intermedius BA1]
gi|422114285|gb|EKU17992.1| mutS2 family protein [Streptococcus intermedius BA1]
Length = 777
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 217/736 (29%), Positives = 343/736 (46%), Gaps = 141/736 (19%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHK 104
AS++L IR R ++ + ++ + I + G +D+ ++ R R + +K + +
Sbjct: 147 ASDNLARIR----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFR 201
Query: 105 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL---------- 154
+ G+ ++S+SG T ++EPK V N ++N++ E IL +L
Sbjct: 202 NRI-SGVVHDISASGNTVYIEPKAVVNLNG---EITNAQADERYEILRILQELSDRIRPH 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AEIA + I +L DL A+ F Q V P+LS I + + H
Sbjct: 258 IAEIANNAWIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTH 304
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL +EN+ V D+ + +VIT
Sbjct: 305 PL----------------------IENA---------------VANDLYFASDLTEIVIT 327
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT +KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS
Sbjct: 328 GPNTGGKTIMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSS 387
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ IV ILE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L
Sbjct: 388 HMTNIVAILEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELK 447
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----- 449
+ +NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ
Sbjct: 448 AYGIEMAGVQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNT 507
Query: 450 -----KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+++ERL E + LES+ R +D RE+E E
Sbjct: 508 DSDVNRIIERL------------------EEQTLESRKR---------LDNIREVEQENL 540
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKE 557
+R L + ++ + ELN A+++ +V + L D S+ + + +I E
Sbjct: 541 KFNRALKKLYNEFNREKETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-E 599
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+++ + + V + + P+ G+ + V S G + V ++ D
Sbjct: 600 AKAQLKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEA 657
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++ +++ + K + P+ RKQ + GPR +
Sbjct: 658 QVGLIKMTLEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-- 701
Query: 678 KNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
LDLRG R EEA +LD I A + + + +IHG+GTGV++E V + LR + V
Sbjct: 702 ---LDLRGKRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKS 758
Query: 736 YEQESPMNYGCTVAYI 751
+ +P N G + A I
Sbjct: 759 FGY-APQNAGGSGATI 773
>gi|306490923|gb|ADM95040.1| mismatch repair ATPase [uncultured candidate division JS1
bacterium]
Length = 793
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 191/683 (27%), Positives = 326/683 (47%), Gaps = 108/683 (15%)
Query: 91 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 150
R+ R + +K K G+ + S SG T FMEP V FNN L E EE I
Sbjct: 197 RQGRYVIPVKQQEKGKF-QGVIHDKSESGVTVFMEPLIVVNFNNELRELRLQEKKEEYKI 255
Query: 151 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 210
L LTA + +S +I + E+DL A+A ++ M+ + P L+ H+ +
Sbjct: 256 LQRLTALVGQSTGDILSNYQYLGELDLIAAKAEVSRKMNALEPKLNVDGHIRLWQA---- 311
Query: 211 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 270
+HPLL G VPID+++ + +
Sbjct: 312 --RHPLLKGKV------------------------------------VPIDMEIGEKYDI 333
Query: 271 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 330
++ITGPNTGGKT ++KT+GL LM+++GL++P + F I ADIGD QS+EQNLS
Sbjct: 334 LIITGPNTGGKTVTLKTVGLLHLMAQSGLHIPVAIDSEVTVFQKIFADIGDEQSMEQNLS 393
Query: 331 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 390
TFS H+ I+ IL SL+L+DE+G+GTDPSEG ALA +IL + + + TTH+
Sbjct: 394 TFSSHMKNIISILNAADHNSLILLDELGAGTDPSEGSALAMAILDLFKTKGAKVLSTTHH 453
Query: 391 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 450
L R NA EF +TL+P Y++ G G S A ++A+ +G ++++A+
Sbjct: 454 DSLKAYAYLTERVRNARVEFDEKTLQPIYKLSIGLPGKSCAFSVAQRLGLSEIVLEKAKN 513
Query: 451 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 510
+E+ E+ LE+ + + A++++ ++I++E K++++
Sbjct: 514 YLEK-------------------EKIDLENLIKQMENDKAQLIEDLKDIKEEKKNIEKIK 554
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-----DASADEINSLIKESESAIAAI 565
LK + NF K ++ ++ ++ R A EI + +K+ ++
Sbjct: 555 EELK-------EDIRNFEKEKLKIKLEAYQEAERILTTAQNKAKEIINFLKKKKAGTEEF 607
Query: 566 VEAHRPDDD-----------FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 614
E + DD +++ + ++FT GE V VKSL K +++ T
Sbjct: 608 TEEIKNLDDLKKEIKNQAEKYNIFKETGNTFTE--GESVFVKSL-QKEGIIIDKDDKKQT 664
Query: 615 VLVQYGKMRVRVKKNNIRPI--PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 672
+VQ G ++++V NN++ + N +N + + DR N++A++
Sbjct: 665 YMVQVGNLKLKVSVNNMQKLYKNNLPERNETISSQSFINLKGDR-------INKKANF-- 715
Query: 673 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR-- 728
K+ +D+R M EAS +L+ L A + S +++IHG G G+++ V ++L+
Sbjct: 716 -----KSEIDIRHMTACEASIRLEKYLDDAFLLNISPVYIIHGKGRGILRNTVTQLLKKL 770
Query: 729 NHPRVAKYEQESPMNYGCTVAYI 751
N+ + +Y + G T+ Y
Sbjct: 771 NYIKSYRYGEVYEGGDGVTIVYF 793
>gi|443632188|ref|ZP_21116368.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443348303|gb|ELS62360.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 785
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 218/738 (29%), Positives = 353/738 (47%), Gaps = 92/738 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD AS L IR + K R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASGTLRGIRTQLKTLESRIRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 201
E E IL +LT A+ E+ + + +D FA+A +A+ + PI++ V
Sbjct: 243 KEKQEIERILRVLTEHTAEHTEELFQDLQVLQTLDFIFAKARYAKAVKATKPIVNDNGFV 302
Query: 202 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 261
+ +HPLL P V N D
Sbjct: 303 RLKKA------RHPLL----------------PPDQVVAN-------------------D 321
Query: 262 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 321
I++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIGD
Sbjct: 322 IELGGDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGD 381
Query: 322 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 381
QS+EQ+LSTFS H+ IVDILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 382 EQSIEQSLSTFSSHMVNIVDILEHVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTN 441
Query: 382 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 441
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 442 ARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLP 501
Query: 442 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 501
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 502 DHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQ 556
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ +L+ + + + QQ +++ A + + ++ + + + + + + LI ++
Sbjct: 557 QIIELNSKKDKMLEEAEQQAAEKVKAATKEAEDIIHELRSIKEEHKSFKDHELIN-AKKR 615
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ V +T F P G++V V + G K T++E G ++ VQ G
Sbjct: 616 LEGAVPTFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGI 671
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
++++VK+ ++ I ++ P P+ K A G S L
Sbjct: 672 LKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVSLE-L 710
Query: 682 DLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--A 734
DLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH V +
Sbjct: 711 DLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSS 767
Query: 735 KYEQESPMNYGCTVAYIK 752
++ + G TV +K
Sbjct: 768 RFGEAGEGGSGVTVVELK 785
>gi|167629882|ref|YP_001680381.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
gi|167592622|gb|ABZ84370.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
Length = 796
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 219/751 (29%), Positives = 351/751 (46%), Gaps = 127/751 (16%)
Query: 21 KNCNFLTELEEKIGFCIDCKLLI---------ILDRASEDLELIRAERK----RNMENLD 67
K+ LT L E +G + + I + D AS +L IR K R E LD
Sbjct: 119 KSTPILTALAEGLGVYREAETEIDRCIVGEGEVADDASPELLKIRRTMKTIQNRVREKLD 178
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+L++ Q + + L+T R R V +++ ++ +P G+ + S+SGAT F+EP
Sbjct: 179 ALIRNPDTQKY----LQDALVTVRGDRYVVPVRSEYRSQIP-GLIHDQSASGATVFIEPM 233
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
VE NN R +E E IL L+ +AK +I ++ + +D FA+ +
Sbjct: 234 AVVELNNELKRNQAAERTEIIRILRDLSLLVAKDAEDIGVSLEVLARLDFIFAKGKLSAR 293
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
MD P +++Q + I +HPL+ G
Sbjct: 294 MDAGEPAVNTQG------KLKIRQGRHPLIAGKV-------------------------- 321
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VP+ I++ +VITGPNTGGKT ++KT+GL +LM+++GL++PA+
Sbjct: 322 ----------VPVTIELGHAFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHVPAEADT 371
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
L F+ I DIGD QS+EQ+LSTFS H++ IV IL+ V SLVL+DE+G+GTDP+EG
Sbjct: 372 ELSLFEHIFVDIGDEQSIEQSLSTFSSHMTNIVGILQEVGPSSLVLLDELGAGTDPTEGA 431
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA +I+++L R + TTHY++L R ENA+ EF +ETLRPTYR+L G G
Sbjct: 432 ALAQAIMEHLLARGAKTIATTHYSELKAFAYSHDRVENASVEFDVETLRPTYRLLIGRPG 491
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLV---ERLRPERQQHRKSE-------------LYQSL 471
SNA I+ +G +++R++ L+ ER + +H ++ L +
Sbjct: 492 RSNAFEISLRLGLREDVVKRSRSLLSQEERDVADLIEHLEANQVTAEREREEAERLRREA 551
Query: 472 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 531
E RRKLE + + A I++ RE EA + R+A + + +++ +N A V+
Sbjct: 552 EELRRKLEQREQAFREKEAAILEKARE---EAYAIVRKAREESDRIVRSLREIMNRAPVK 608
Query: 532 IDTVVQDFENQ-LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
+ + E Q LR+ N L +E E H+ ++ + + G
Sbjct: 609 EEMARAESERQRLREIQ----NKLGEERE---------HQEGGAGPLALKSV-----KVG 650
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
+ V V L K TV+ +P + +Q G +++ VK ++ K P++
Sbjct: 651 QTVFVPRLNQK-GTVLTLPNPQGELQIQAGILKLNVKLAELQGTKEDK--------PKI- 700
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESR 705
G + A + + LD RG +EA + D LA +S
Sbjct: 701 -----------GQTEYAAMARGKAREMSRELDFRGTTADEAIELVEKYLDDAYLAGLDS- 748
Query: 706 SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +IHG GTG ++ + L+ H V +
Sbjct: 749 --VCLIHGKGTGALRAAIRSYLQKHRYVKSF 777
>gi|336400040|ref|ZP_08580828.1| MutS2 protein [Fusobacterium sp. 21_1A]
gi|336163237|gb|EGN66169.1| MutS2 protein [Fusobacterium sp. 21_1A]
Length = 778
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 213/781 (27%), Positives = 369/781 (47%), Gaps = 154/781 (19%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRLIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP +
Sbjct: 285 ENKCEIPTVSNREILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G +I +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESVISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V N I+ + K
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKE 686
Query: 640 K----NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
K N P ++ +DLRG V+EA ++L
Sbjct: 687 KVYNMNTHKKTP-----------------------------VRSEIDLRGKMVDEAVYEL 717
Query: 696 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 751
+ L A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +
Sbjct: 718 ETYLDRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTL 777
Query: 752 K 752
K
Sbjct: 778 K 778
>gi|417788685|ref|ZP_12436368.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
gi|334308862|gb|EGL99848.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
Length = 786
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 207/692 (29%), Positives = 327/692 (47%), Gaps = 119/692 (17%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------DMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLY 496
I+ A++L + +E+ L+ +R E + R A LH ++ +
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLETNF 557
Query: 497 REIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQLRDASADEI 551
+ E + +++ +A A+ +ET++ EL K+++ E L DA +
Sbjct: 558 HQFERQKENMLEQAKERANQIVEETKKKSNELISELRKMKMSAASNIEEGSLIDAQG-RV 616
Query: 552 NSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 604
N+L +E+ ++ E H P+DD V V S G +
Sbjct: 617 NALHQETNLKKNKVLRKAKQQQELH-PNDD------------------VMVNSYGQR--G 655
Query: 605 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 664
V+ + VQ G +++++ ++++ I K + +++G+ S
Sbjct: 656 VLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPKRAGAVLKS 701
Query: 665 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 722
+ + P +LDLRG R E A ++D I A + + +IHG GTG ++
Sbjct: 702 SSSSHVSP-------TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTG 754
Query: 723 VLEILRNHPRVAKYEQESPMN--YGCTVAYIK 752
++ L+ + V +E SP N G TV Y K
Sbjct: 755 IINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|300813660|ref|ZP_07093982.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512202|gb|EFK39380.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 788
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 203/706 (28%), Positives = 339/706 (48%), Gaps = 80/706 (11%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+ D AS L IR RN+ L L++ +I Q+ + +IT R R + ++
Sbjct: 149 VADDASRKLLSIR----RNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRN 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K + G+ ++S SG T ++EP V NN L E E IL L+ E+A+
Sbjct: 205 ENKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEV 263
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
I+ + EID FA+ + M P V+ + I+++ HPLL
Sbjct: 264 STSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL---- 313
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
N ++ V PI+I + + ++ITGPNTGGK
Sbjct: 314 -------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGK 342
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KTLG+ LM++ GL++PA ++ F+ + ADIGD QS+EQNLSTFS H++ IV+
Sbjct: 343 TVTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVE 402
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
ILE V +SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTHY L
Sbjct: 403 ILEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTE 462
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
+NA+ EF + TL PTY++L G G SNA I+K +G +KII A+ L+ + E ++
Sbjct: 463 GVKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEK 522
Query: 462 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 521
+ S+ ++R K A +++ +E+E K ++ + + +
Sbjct: 523 -----VLASIEKDRTKTREFKELAKRHKSDLEKQNARLENELKKIENSKEKILKEAKDEA 577
Query: 522 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 581
++ L K +D ++ + + + S+D+ I+ES + + D F + +
Sbjct: 578 RRILLSTKENVDLILDEISSLKAEISSDQARR-IQESGDLLRNSIRKVDNDKKFVIEKAK 636
Query: 582 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 641
+ G+QV S G+ ++TV+E+P + +Q G M+++V K ++ I
Sbjct: 637 KPIEDIKVGDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESLTKI------- 687
Query: 642 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 699
+P + K + S + K+ +DLRG E++ +D L
Sbjct: 688 --DPIDEVSKTKTRNIIKS------------KTMDVKSQIDLRGKNFEDSRDLVDKYLDD 733
Query: 700 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
A + +IHG GTGV+++++ E L+ V Y ++P N G
Sbjct: 734 AFLAGLKTVNLIHGKGTGVLRKKLREYLKKQKNVKSY-SDAPYNEG 778
>gi|306834300|ref|ZP_07467417.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
gi|304423473|gb|EFM26622.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
Length = 778
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 211/723 (29%), Positives = 347/723 (47%), Gaps = 115/723 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQARHPLLTD-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLDELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNHIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QNHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKARAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ A + + ++++ L D ++ + + +I E++S + + P+ D S
Sbjct: 571 I------VDKAMTESEEILKN----LHDRASLKPHEVI-EAKSQLKKLA----PEVDLSK 615
Query: 578 SETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 616 NKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF--- 670
Query: 635 PNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
L K QE+ Q + S GPR + LDLRG R EE
Sbjct: 671 -------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + + + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGC 772
Query: 747 TVA 749
T+A
Sbjct: 773 TIA 775
>gi|430758681|ref|YP_007208637.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430023201|gb|AGA23807.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 785
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 360/739 (48%), Gaps = 94/739 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 243 KEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMNDTGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
I ++ +HPLL P V N
Sbjct: 302 ------IRLKKARHPLL----------------PPDQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+ +L+ + + + QQ +++ A + + ++ + + + + + + LI ++
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN-AKK 614
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ + A +T F P G++V V + G K T++E G ++ VQ G
Sbjct: 615 RLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIG 670
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++++VK+ ++ I ++ P P+ K A G S
Sbjct: 671 ILKMKVKEKDLEFIKSA-------PEPKKEKMI-------------TAVKGKDYHVSLE- 709
Query: 681 LDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV-- 733
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH V
Sbjct: 710 LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKS 766
Query: 734 AKYEQESPMNYGCTVAYIK 752
+++ + G TV +K
Sbjct: 767 SRFGEAGEGGSGVTVVELK 785
>gi|385812102|ref|YP_005848493.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum CECT
5716]
gi|299783001|gb|ADJ40999.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum CECT
5716]
Length = 793
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 336/684 (49%), Gaps = 83/684 (12%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
QA + P+IT R R + + A ++ G+ + S+SG T ++EP VE NN R
Sbjct: 182 QAKKLSDPIITIRNDRYVIPVLAQYRNQF-GGVVHDQSASGQTLYIEPGSVVELNN---R 237
Query: 139 LSNSEIAEETAILSLLTAEIAKSER----EIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L ++I E + +L AE++ R +I + +DL A+A A M P+
Sbjct: 238 LRQAQIEERQEVRKVL-AELSDLVRPYRNDIAQNAQLLGHLDLINAKAKLAAAMKASVPL 296
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L+ + V N+ +HPL+ + E V +
Sbjct: 297 LNQEGEV------NLRMARHPLI-----------------------DQEKVVAN------ 321
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
DI + + + +VITGPNTGGKT ++KTLGL LM+++G+++PA + + FD
Sbjct: 322 ------DIALGKDYQAIVITGPNTGGKTITLKTLGLIQLMAQSGMFIPANENSTVAIFDN 375
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 374
+ ADIGD QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL
Sbjct: 376 VFADIGDEQSLEQNLSTFSGHMENVKRILEQITANSLVLLDELGAGTDPKEGAALAMAIL 435
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
+ VVTTHY +L + NA+ EF +TL+PTYR+L G G SN + I
Sbjct: 436 DQIGATGSEVVVTTHYPELKVYGYDRAKTINASMEFDQQTLQPTYRLLLGVPGQSNGIAI 495
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
AK +G ++ +I A LV + Q K + L+E+R++ + +L E
Sbjct: 496 AKRLGIEQAVIDEASSLVS---DDSQDLNK--MIGDLVEQRKRAREENERLQALVKENAA 550
Query: 495 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINS 553
E++ + + + L + + E++ AK + + ++ +++ A+ E N
Sbjct: 551 TKEELDAKLDRFNEQRDKLLERARSEANHEVSQAKKKANQIIHHLRQLEIQGATVKE-NE 609
Query: 554 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
LI +++ A+ A+ + + + SV + + G+ V+VKS G + ++ G
Sbjct: 610 LI-DAQGALNALHKDNPRLNHNSVLQRAKQKHQLKVGDHVNVKSYGQQ-GVLLNKRGAHK 667
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
VQ G +++ + + ++ I + K A +K + R+
Sbjct: 668 WE-VQLGILKMAIDEADLEKISAKQAKQAE------KKHAQPRRMAVR-----------T 709
Query: 674 VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+QT + S LDLRG R EEA +L I A + + +IHG GTG +++ + L++
Sbjct: 710 IQTRQTSARLDLRGHRYEEAMSELASFIDHALLNNLPSVTIIHGKGTGALRKGTQQYLQS 769
Query: 730 HPRVAKYEQESPMNY--GCTVAYI 751
+PRV +E SP N G T+AY
Sbjct: 770 NPRVKNFEYASPSNGGDGATIAYF 793
>gi|184155003|ref|YP_001843343.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum IFO
3956]
gi|227514541|ref|ZP_03944590.1| MutS family DNA mismatch repair protein [Lactobacillus fermentum
ATCC 14931]
gi|260663398|ref|ZP_05864289.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum
28-3-CHN]
gi|183226347|dbj|BAG26863.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum IFO
3956]
gi|227087098|gb|EEI22410.1| MutS family DNA mismatch repair protein [Lactobacillus fermentum
ATCC 14931]
gi|260552250|gb|EEX25302.1| DNA mismatch repair protein MutS2 [Lactobacillus fermentum
28-3-CHN]
Length = 791
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 336/684 (49%), Gaps = 83/684 (12%)
Query: 79 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 138
QA + P+IT R R + + A ++ G+ + S+SG T ++EP VE NN R
Sbjct: 180 QAKKLSDPIITIRNDRYVIPVLAQYRNQF-GGVVHDQSASGQTLYIEPGSVVELNN---R 235
Query: 139 LSNSEIAEETAILSLLTAEIAKSER----EIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 194
L ++I E + +L AE++ R +I + +DL A+A A M P+
Sbjct: 236 LRQAQIEERQEVRKVL-AELSDLVRPYRNDIAQNAQLLGHLDLINAKAKLAAAMKASVPL 294
Query: 195 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 254
L+ + V N+ +HPL+ + E V +
Sbjct: 295 LNQEGEV------NLRMARHPLI-----------------------DQEKVVAN------ 319
Query: 255 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 314
DI + + + +VITGPNTGGKT ++KTLGL LM+++G+++PA + + FD
Sbjct: 320 ------DIALGKDYQAIVITGPNTGGKTITLKTLGLIQLMAQSGMFIPANENSTVAIFDN 373
Query: 315 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 374
+ ADIGD QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL
Sbjct: 374 VFADIGDEQSLEQNLSTFSGHMENVKRILEQITANSLVLLDELGAGTDPKEGAALAMAIL 433
Query: 375 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 434
+ VVTTHY +L + NA+ EF +TL+PTYR+L G G SN + I
Sbjct: 434 DQIGATGSEVVVTTHYPELKVYGYDRAKTINASMEFDQQTLQPTYRLLLGVPGQSNGIAI 493
Query: 435 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
AK +G ++ +I A LV + Q K + L+E+R++ + +L E
Sbjct: 494 AKRLGIEQAVIDEASSLVS---DDSQDLNK--MIGDLVEQRKRAREENERLQALVKENAA 548
Query: 495 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINS 553
E++ + + + L + + E++ AK + + ++ +++ A+ E N
Sbjct: 549 TKEELDAKLDRFNEQRDKLLERARSEANHEVSQAKKKANQIIHHLRQLEIQGATVKE-NE 607
Query: 554 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 613
LI +++ A+ A+ + + + SV + + G+ V+VKS G + ++ G
Sbjct: 608 LI-DAQGALNALHKDNPRLNHNSVLQRAKQKHQLKVGDHVNVKSYGQQ-GVLLNKRGAHK 665
Query: 614 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 673
VQ G +++ + + ++ I + K A +K + R+
Sbjct: 666 WE-VQLGILKMAIDEADLEKISAKQAKQAE------KKHAQPRRMAVR-----------T 707
Query: 674 VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRN 729
+QT + S LDLRG R EEA +L I A + + +IHG GTG +++ + L++
Sbjct: 708 IQTRQTSARLDLRGHRYEEAMSELASFIDHALLNNLPSVTIIHGKGTGALRKGTQQYLQS 767
Query: 730 HPRVAKYEQESPMNY--GCTVAYI 751
+PRV +E SP N G T+AY
Sbjct: 768 NPRVKNFEYASPSNGGDGATIAYF 791
>gi|229087099|ref|ZP_04219249.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
gi|228696167|gb|EEL49002.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
Length = 786
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 222/753 (29%), Positives = 358/753 (47%), Gaps = 98/753 (13%)
Query: 15 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 69
P+LE + L +LE+KI CI + LD AS+ L IR + R E L+++
Sbjct: 117 PILETYVAQIVSLYDLEKKITSCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENM 175
Query: 70 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 129
+ AQ + I +T R R + +K ++ + GI + S+SG T F+EP+
Sbjct: 176 TRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVI 230
Query: 130 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 189
VE NN E E IL +LT E+A + ++ + +D FA+A +A+ +
Sbjct: 231 VELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLANVEVIANLDFIFAKALYAKRIK 290
Query: 190 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 249
PI++++ ++ + +HPL+ +P
Sbjct: 291 ATKPIVNNERYMDLRQA------RHPLI---------------DP--------------- 314
Query: 250 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 309
VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 -----KIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEI 369
Query: 310 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 369
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG AL
Sbjct: 370 CVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAAL 429
Query: 370 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 429
A SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G S
Sbjct: 430 AISILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRS 489
Query: 430 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 487
NA I+K +G ++I RA+ + + + E + E ++ E + E + +
Sbjct: 490 NAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEK 549
Query: 488 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 547
LH E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 550 LHRELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQ 601
Query: 548 -ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLA 603
A+ + + E++S + E P+ ++ Q G++V V + G K
Sbjct: 602 LANVKDHELIEAKSRL----EGAAPELVKKQKVKVKNTAPKQQLRAGDEVKVLTFGQKGQ 657
Query: 604 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 663
+ +V D+ VQ G ++++VK++++ I N+ P E + +
Sbjct: 658 LLKKV--SDNEWNVQIGILKMKVKESDMEYI------NSPQPV-------EKKAVATVKG 702
Query: 664 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 721
+ S LDLRG R E A +++ L A S + +IHG GTG +++
Sbjct: 703 RDYHVSL---------ELDLRGERFENAMVRVEKYLDDAQLASYPRVSIIHGKGTGALRQ 753
Query: 722 RVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 752
V + L+ H V +Y G TV +K
Sbjct: 754 GVQDYLKKHRGVKNFRYGDMGEGGLGVTVVELK 786
>gi|16079910|ref|NP_390736.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310799|ref|ZP_03592646.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315124|ref|ZP_03596929.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221320042|ref|ZP_03601336.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324324|ref|ZP_03605618.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402777014|ref|YP_006630958.1| DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|418031956|ref|ZP_12670439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|452915656|ref|ZP_21964282.1| mutS2 family protein [Bacillus subtilis MB73/2]
gi|3914084|sp|P94545.2|MUTS2_BACSU RecName: Full=MutS2 protein
gi|1770036|emb|CAA99569.1| hypothetical protein [Bacillus subtilis]
gi|2635323|emb|CAB14818.1| putative DNA mismatch repair enzyme [Bacillus subtilis subsp.
subtilis str. 168]
gi|351470819|gb|EHA30940.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|402482194|gb|AFQ58703.1| Putative DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|407960866|dbj|BAM54106.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|407965696|dbj|BAM58935.1| recombination and DNA strand exchangeinhibitorprotein [Bacillus
subtilis BEST7003]
gi|452116004|gb|EME06400.1| mutS2 family protein [Bacillus subtilis MB73/2]
Length = 785
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 359/739 (48%), Gaps = 94/739 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 243 KEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMNDTGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
I ++ +HPLL P V N
Sbjct: 302 ------IRLKKARHPLL----------------PPDQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+ +L+ + + + QQ +++ A + + ++ + + + + + LI ++
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEEHKSFKDHELIN-AKK 614
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ + A +T F P G++V V + G K T++E G ++ VQ G
Sbjct: 615 RLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIG 670
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++++VK+ ++ I ++ P P+ K A G S
Sbjct: 671 ILKMKVKEKDLEFIKSA-------PEPKKEKMI-------------TAVKGKDYHVSLE- 709
Query: 681 LDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV-- 733
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH V
Sbjct: 710 LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKS 766
Query: 734 AKYEQESPMNYGCTVAYIK 752
+++ + G TV +K
Sbjct: 767 SRFGEAGEGGSGVTVVELK 785
>gi|421453204|ref|ZP_15902560.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181513|gb|EJO15780.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
Length = 810
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 202/727 (27%), Positives = 342/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 175 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 230
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 231 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSEQLRPQAAAI 289
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + V P +S + ++ + ++HPLL+
Sbjct: 290 ANNAWILGHMDFIRGKYLYLHDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 337
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D+ + + +VITGPNTGGKT +
Sbjct: 338 -------------------------------PVANDLHFDEDLTAIVITGPNTGGKTVML 366
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 367 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNA 426
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 427 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 486
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 487 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 537
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 538 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 588
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I +V D + E NS++K +S+ +++A P D
Sbjct: 589 LEKAQKEIQEMV--------DTALAESNSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVD 640
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 641 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 698
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A QQ ++ + ++ S GPR + LDLRG R
Sbjct: 699 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKTSGGPRAR-----LDLRGKRY 742
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 743 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 802
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 803 GCTIATL 809
>gi|288906127|ref|YP_003431349.1| Mismatch repair ATPase (MutS family) [Streptococcus gallolyticus
UCN34]
gi|386338568|ref|YP_006034737.1| DNA mismatch repair protein MutS2 [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|288732853|emb|CBI14432.1| Mismatch repair ATPase (MutS family) [Streptococcus gallolyticus
UCN34]
gi|334281204|dbj|BAK28778.1| DNA mismatch repair protein MutS2 [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 778
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 210/723 (29%), Positives = 348/723 (48%), Gaps = 115/723 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL+
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQARHPLLID-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ A + + ++++ L D ++ + + +I E++S + + P+ D S
Sbjct: 571 I------VDKAMAESEEILKN----LHDRASLKPHEVI-EAKSQLKKLA----PEVDLSK 615
Query: 578 SETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 616 NKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF--- 670
Query: 635 PNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
L K QE+ Q + + GPR + LDLRG R EE
Sbjct: 671 -------------TLVKVQEEAQKPKKKQVNVVKKSKKAAGPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + + + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGC 772
Query: 747 TVA 749
T+A
Sbjct: 773 TIA 775
>gi|301300876|ref|ZP_07207048.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851475|gb|EFK79187.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 786
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 199/674 (29%), Positives = 317/674 (47%), Gaps = 83/674 (12%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ GI + SSSG T F+EP VE NN RL ++AE
Sbjct: 188 VVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQQVAE 243
Query: 147 E---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
IL L+ E+A E+ + +D A+A +A + PILS ++ V
Sbjct: 244 REEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL +K V+N DI
Sbjct: 303 -----LRQVWHPLL----------------DMKKAVKN-------------------DIM 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL + +
Sbjct: 383 SIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G D+
Sbjct: 443 VVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKM 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 503
I+ A++L + +E+ L+ +R E + E +L+ ++E
Sbjct: 503 IVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLETNF 557
Query: 504 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAI 562
+R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 558 HQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVN 617
Query: 563 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 622
A E + + P + V V S G + V+ + VQ G +
Sbjct: 618 ALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQLGIL 673
Query: 623 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 682
++++ ++++ I K + +++ + S+ + P +LD
Sbjct: 674 KMKIDESDLEKIK--------------VKDTQPKRAEAVLKSSSSSHVSP-------TLD 712
Query: 683 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES 740
LRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +E S
Sbjct: 713 LRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNFEFAS 772
Query: 741 PMN--YGCTVAYIK 752
P N G TV Y K
Sbjct: 773 PNNGGNGATVVYFK 786
>gi|395240988|ref|ZP_10418010.1| MutS2 protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475496|emb|CCI87987.1| MutS2 protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 787
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 230/792 (29%), Positives = 370/792 (46%), Gaps = 139/792 (17%)
Query: 4 QECGNIFHRYSPLLELLKNCN-FLTELEEKIGFCIDCKLL-------------------- 42
QE GNI +L L K N F+ L+EKI +LL
Sbjct: 87 QELGNIL----LVLTLAKEINAFVEGLDEKIKLDAILELLDELDVPEEFYRVLKNALDID 142
Query: 43 -IILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 97
ILD AS +L +R + + N +D +K + + + + ++T R R +
Sbjct: 143 GTILDSASSELARLRHDLRSNETEIKTRMDGYVKGRSNKY-----LSEAIVTIRDGRYVI 197
Query: 98 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 157
+K ++ GI + S+SG T F+EP+G + N+ + L E E IL L+
Sbjct: 198 PVKQEYRAKFG-GIVHDQSASGQTLFIEPEGVLNLNSRQQNLLAQERQEIQRILRELS-N 255
Query: 158 IAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 216
+A+ E + VL E+D A+A A + P L+ D S+ + +HPL
Sbjct: 256 LAREEIPTISTISEVLAELDFIQAKAKLATELKATEPKLTQ------DQSLKLLKARHPL 309
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
+ L++ VP DI + E ++ITGP
Sbjct: 310 I------------------------------DLTR-----VVPNDIYLGAEFDTMLITGP 334
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT ++KT GL LM+++GL++PA+ ++ F I ADIGD QS+EQ+LSTFS HI
Sbjct: 335 NTGGKTITLKTAGLLQLMAQSGLFIPAEEGSQVGVFKEIFADIGDEQSIEQSLSTFSSHI 394
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 396
+ IVDI++ +++LVLIDEIG+GTDP EG +LA SIL +LR R +VTTHY +L
Sbjct: 395 NDIVDIMKNSHQDTLVLIDEIGAGTDPEEGASLAISILDFLRQRKAKIMVTTHYPELKLY 454
Query: 397 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 456
R NA+ EF ++TL PTYR+ G G SNA IA+ +G +++ A+ L++ +
Sbjct: 455 GYNRERTTNASMEFDIKTLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAEGLMKDVD 514
Query: 457 PERQQHRKSELYQSLMEERRK-LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
+ Q + +L ++ +K E++ + SL A +L ++++D A D+
Sbjct: 515 SDINQ-----MIATLNDQTKKATEARIQLQTSL-ARSRNLEKKLQD-ALDI--------- 558
Query: 516 KETQQVQQELNFAKVQIDTVV-----------QDFENQLRDASADEINSLIKESESAIAA 564
Q+VQ++L FA+ + + VV ++ E Q ++ + + N LI +++
Sbjct: 559 -YNQRVQKQLEFAQERANEVVAKKRKKAEEIIKELEEQRKNGALIKQNKLI-DAKGEFNK 616
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
+ + + V + G+QV V S G V+ D VQ G ++V
Sbjct: 617 LEQQATNLANNRVLQREKRRHHVNVGDQVKVLSYGQ--TGVITKKLTDHDYEVQIGIIKV 674
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+V +I I +K +G + A+ R + + LDLR
Sbjct: 675 KVTDRDIERIETAK-------------------TGKQVAKKVRATSSLRRSNAHSELDLR 715
Query: 685 GMRVEEASHQLD-----IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
G R ++A LD + LA ++ + +IHG+GTG +++ V LR+ V +
Sbjct: 716 GERYDDAMTDLDRYIDSVLLAGLDT---VTIIHGIGTGAIRKGVWNYLRSSHHVKSFNY- 771
Query: 740 SPMNYGCTVAYI 751
+P N G A I
Sbjct: 772 APANEGGNGATI 783
>gi|269122243|ref|YP_003310420.1| MutS2 family protein [Sebaldella termitidis ATCC 33386]
gi|268616121|gb|ACZ10489.1| MutS2 family protein [Sebaldella termitidis ATCC 33386]
Length = 780
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 214/758 (28%), Positives = 368/758 (48%), Gaps = 99/758 (13%)
Query: 8 NIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 67
NI +Y + + + L +LE+ I +D + + D AS L IR ++ N+
Sbjct: 109 NIKDKYGLVWNIFSDTEDLKDLEDFISEVVDDEGNM-KDTASLGLRDIRRQKSNINVNIK 167
Query: 68 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
++ I + ++TKR R + +K K L+ GI + SS+G+T ++EP
Sbjct: 168 EKFDEIINNRDLQKAIQEKIVTKRNERYVIPVKTEFKSLVK-GIEHDRSSTGSTVYIEPL 226
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
V NN E E +L +T I + EI + D + +D A+ ++
Sbjct: 227 NTVSLNNKLREYEAKEREEIRKVLIRITELIRNKKDEIALIKDLLERLDFINAKVLYSIE 286
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
+ P + ++ ++ + +HPL ++ +M
Sbjct: 287 NECRVPKVVNKEYLKLVVA------RHPL----------------------IDREKM--- 315
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPI+ ++ +++ITGPNTGGKT + K GL ++M+ +G+ +PA
Sbjct: 316 ----------VPINFELGDNDNIMLITGPNTGGKTVTQKIAGLLTIMALSGIPIPADEKT 365
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
+ +F +LADIGD QS+EQNLS+FS HI I +ILE +R SLVLIDEIGSGTDP EG
Sbjct: 366 EIGFFGSVLADIGDEQSIEQNLSSFSAHIKNIKEILEAANRRSLVLIDEIGSGTDPMEGA 425
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
A A S++ YL + +++TTHY+++ ++A+ EF++ETL PTYR+L G G
Sbjct: 426 AFAMSVIDYLNQKNVKSIITTHYSEVKAHAFNTDGIKSASMEFNVETLLPTYRLLEGIPG 485
Query: 428 DSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ----QHRKSELYQSLME-ERRKLES 480
+SNAL IA G + +II A+ + E + E+ + + E+ + +E E K E
Sbjct: 486 ESNALIIAGKYGINEEIINNAKSYISEENQKVEKMLISIKEKTDEVEKLKIELENAKEEM 545
Query: 481 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 540
++R A+I+ L E+E + + A K ++VQ + AK +D + QD
Sbjct: 546 ESR-KQKYEADIITL----ENEKNQIVKEAYDEADKYLREVQAK---AKNLVDKISQD-- 595
Query: 541 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSL 598
+++ A K+++ ++ + E+ R + + +V + ++ F GE+V VKS+
Sbjct: 596 -EMKKEEA-------KDAQRSLNMLRESFRLEKEQNVKKKVKTNKKTDFQLGEEVFVKSI 647
Query: 599 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 658
++ + G+ D+V +Q G +++ V ++I+ I +K A
Sbjct: 648 NQN-GKILRIIGESDSVQIQAGILKLVVSTDDIQKIEKKNKKKLGGFA------------ 694
Query: 659 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 716
S S+N K +DLRGM +EA +L++ L A S +++IHG GT
Sbjct: 695 -SLKSTN-----------VKGEVDLRGMTGDEAMTELELYLDRAMLTGYSEVYIIHGKGT 742
Query: 717 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
++ R+ E L+ +++Y ++ GCTVA +K
Sbjct: 743 MALRTRIQEYLKKSKYISEYRDANQNEGGLGCTVAKLK 780
>gi|322373719|ref|ZP_08048255.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
gi|321278761|gb|EFX55830.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
Length = 782
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 201/727 (27%), Positives = 342/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSVQLRPQAAAI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLHDKKAVIP------KISDNQTLQLLNVRHPLLVN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNA 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I ++ D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMI--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVD 612
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + V KM ++ +
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQRGTLTSQTKNGNWEAQVGLIKMTLKADE 672
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ R A QQ ++ + ++AS GPR + LDLRG R
Sbjct: 673 FTL------ARAQA-------EAQQPKKKQINVVKKAKKASGGPRAR-----LDLRGKRY 714
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|302874999|ref|YP_003843632.1| MutS2 family protein [Clostridium cellulovorans 743B]
gi|302577856|gb|ADL51868.1| MutS2 family protein [Clostridium cellulovorans 743B]
Length = 784
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 217/707 (30%), Positives = 338/707 (47%), Gaps = 99/707 (14%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGI-DKPLITKRRSRMCVGIKAS 102
I D+AS L IR K E +S+ +KV++ + Q + + T R R + +KA
Sbjct: 145 ISDKASTTLYNIRRSLK---EKNNSVKEKVSSMVRQYSNVLQENFYTIRGDRYVLPVKAE 201
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 162
HK + G+ + SS+G+T F+EP V NN L E AE IL L+ ++
Sbjct: 202 HKGSV-QGLVHDQSSTGSTLFIEPIALVNLNNEIKELLLKEKAEIDRILQELSNKVYDDI 260
Query: 163 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 222
I+ V E+D FA+A +A + P ++ D ++++ +HPLL
Sbjct: 261 NVIENNSLIVTELDFIFAKAKYANDLGCTIP------KINKDGNVDLIEARHPLL----- 309
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
VP DIK+ E +VITGPNTGGKT
Sbjct: 310 ------------------------------DRKIVVPSDIKLGREFTSLVITGPNTGGKT 339
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
++KTLGL LM+ +GL +PA+ + + +F I ADIGD QS+EQ+LSTFS H++ IV I
Sbjct: 340 VTLKTLGLIELMALSGLLIPARENSTVGFFKEIFADIGDEQSIEQSLSTFSSHMTNIVSI 399
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR-DRVGLAVVTTHYADLSCLKDKDT 401
+E SL L DE+G+GTDP+EG ALA SIL+ LR ++V L V TTHY++L K
Sbjct: 400 IENADEHSLALFDELGAGTDPTEGAALAISILENLRMNKVKL-VATTHYSELKGYALKTE 458
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 461
ENA+ EF +ETL+PTYR+L G G SNA I++ +G II A++ + R E +
Sbjct: 459 NVENASVEFDVETLKPTYRLLIGIPGKSNAFEISRRLGLPDYIITNAKENIARETLEFE- 517
Query: 462 HRKSELYQSLMEERRKLESQARTAA--SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+L Q+L E+ K E R ++ A+ E + + L R A + K +
Sbjct: 518 ----DLIQTLQEKSIKAEEYRREHELLTIEAKKYKEKYEEKFNSISLSREKAIEEGK--R 571
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
+ ++ L AK + D +++D + ++E + +E +E
Sbjct: 572 EARKLLKEAKEEADNILRDMRELEKLGYGAGARQKLEEQRLKLKNKLEE---------AE 622
Query: 580 TNTSS--------FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
TN + T GE+V + SL K A V+ + V VQ G M++ +K + +
Sbjct: 623 TNLKNKTLDGEALTTVTEGEEVFIPSLNQK-AIVIGKVDNKGEVQVQAGIMKISIKLSEL 681
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
R ++K + +++K++ S S S+D+RG+ EE
Sbjct: 682 RSPKDTKEQ------KKVKKREMKLNLKSVSS----------------SIDIRGVDGEEG 719
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+ +D L A + +IHG GTG ++ + E+L+ H V +
Sbjct: 720 RYMVDKYLDDAFMAGLGEVTIIHGKGTGTLRNAICEMLKKHHHVKSF 766
>gi|399516116|ref|ZP_10757738.1| Recombination inhibitory protein MutS2 [Leuconostoc
pseudomesenteroides 4882]
gi|398649082|emb|CCJ65765.1| Recombination inhibitory protein MutS2 [Leuconostoc
pseudomesenteroides 4882]
Length = 799
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 201/688 (29%), Positives = 327/688 (47%), Gaps = 132/688 (19%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P++T R R + +KA +++ G+ + S SG T ++EP+ V+ NN L A
Sbjct: 189 PIVTIRADRYVIPVKAEYRHQF-GGVVHDQSQSGLTLYIEPQSVVDLNNKISELRVKAHA 247
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
EE +L L+AE+ EI+ + + D A+A A ++ + P+++ +H+S
Sbjct: 248 EEQRVLQELSAELMPYVTEIQRNVSILGHFDFVNAKARLAAKLNAMQPLVNPANHISLAQ 307
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
+ HPLL + ++ V + DI +
Sbjct: 308 AW------HPLL-----------------------DQKVAVAN------------DIAIG 326
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
+ ++ITGPNTGGKT ++KTLGL LM+++GL++ K + F + ADIGD QS+
Sbjct: 327 EHYKTIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTKRPSTVGIFKEVFADIGDEQSI 386
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQNLSTFS H++ IV +L+ + +SLV+ DE+G+GTDP+EG ALA +IL + +
Sbjct: 387 EQNLSTFSSHMANIVSMLDKIDDKSLVIFDELGAGTDPAEGAALAIAILDKVASLGAYTI 446
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY +L +NA+ F +ETL+PTY+ L G G SNAL IAK +GF +I
Sbjct: 447 ATTHYPELKLYGYNRPETQNASMVFDVETLQPTYQFLMGVPGQSNALAIAKRLGFGEDVI 506
Query: 446 -----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 494
Q ++ L +R + +K + SL + + +SQA +L + M
Sbjct: 507 GAATSLTNDSDQDLNNMIADLVAQRDEVKKKNV--SLTNQLKDTKSQAE---ALRDKEMQ 561
Query: 495 LYREIEDEAK---DLDRRAAHLKA---KETQQV------------------QQELNFAKV 530
L + D+A+ D A H+ A K+ +Q+ +QEL K
Sbjct: 562 LEK---DQARILLDAKNEANHIVAATKKKAEQLISEIRRERLNGGAKATSTEQELQQKKG 618
Query: 531 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFG 590
Q+D LR + E N ++++++ A + P DD +V +G
Sbjct: 619 QLDN--------LRQNVSLEKNKVLQKAKKA-----KQLSPGDDITVQS---------YG 656
Query: 591 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 650
+Q T+V+ + V+ G +++ V +++I + + R +
Sbjct: 657 QQ----------GTLVK-KHSNGQWEVEMGILKMLVDEDDIVKTEATIKAQKEKSKQRQQ 705
Query: 651 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVL 708
K + +GSA + T K++LDLRG+R E A +LD L A + S +
Sbjct: 706 KMTRTKATGSARA------------TVKSTLDLRGIRYEAALSELDKYLDTAVLANISPV 753
Query: 709 FVIHGMGTGVVKERVLEILRNHPRVAKY 736
+IHG GTG +++ V E LR+ RVA Y
Sbjct: 754 EIIHGKGTGALRQGVTEFLRSDRRVASY 781
>gi|374313716|ref|YP_005060146.1| DNA mismatch repair protein MutS domain-containing protein
[Granulicella mallensis MP5ACTX8]
gi|358755726|gb|AEU39116.1| DNA mismatch repair protein MutS domain protein [Granulicella
mallensis MP5ACTX8]
Length = 855
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 216/726 (29%), Positives = 335/726 (46%), Gaps = 94/726 (12%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
D AS +L IR +R ++ L++ +++ ++G LIT R R + +KA K
Sbjct: 187 DDASPELRRIRRAMERQHRAIEDSLRRALSKLSESGSTQDELITVRGERFVIPVKAEFKR 246
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ SSSG T F+EP +E NN VRL + E AE IL +T +A + +
Sbjct: 247 KV-GGVVHGSSSSGQTVFVEPMETIEQNNELVRLLDEEQAEVHRILVAMTRAVAAQAQAL 305
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS---SINIEGIKHPLLLGSSL 222
+ + D A A FA+ ++ V P +S V+ + + +HPLL L
Sbjct: 306 LLGAGVLAQADAHQAVARFAELLECVRPAFASAEDVNAEDDGYEFELAAARHPLL-ELRL 364
Query: 223 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 282
R AA VP+ I + R ++++GPNTGGKT
Sbjct: 365 REQDAAI----------------------------VPLTIALPLGMRQMIVSGPNTGGKT 396
Query: 283 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 342
++KT GL +LM++AGL +PA +LP F I ADIGD QS+EQNLSTFS H+ + I
Sbjct: 397 VALKTAGLLALMAQAGLPVPAA-RAKLPLFTAIYADIGDAQSIEQNLSTFSAHVVNVNRI 455
Query: 343 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 402
+ SLVL+DE+GS TDP EG ALA ++ ++ + ++TTH L K
Sbjct: 456 ARVADDTSLVLLDELGSATDPEEGAALAVAVAEHFLMQRAWCLITTHLTSLKVYATKHEG 515
Query: 403 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII--QRAQKLVERLRPERQ 460
NAA F L PTY + G G S LNIA +G D I+ RAQ +++ R
Sbjct: 516 VLNAAVGFDEARLAPTYELRLGVPGASAGLNIAARLGLDPAIVANARAQMTTQQIDIGR- 574
Query: 461 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 520
EL+ L + + E A L+AE + L E R + +E ++
Sbjct: 575 --FLDELHAQLAAAKDEREGLAELQKKLNAERLKLATE--------GRAEQQARTRELER 624
Query: 521 VQQELNFAKVQIDTVVQDFENQLRDA----------------SADEINSLIKESESAIAA 564
Q+ ++++DFE+QLRD SA I L +E + +
Sbjct: 625 ----------QLKSLIEDFESQLRDTVKAIDDKTVAQKIARDSALRIAQLRREFSAQFQS 674
Query: 565 IVEAHRPDDD-FSVSETNTSSFTPQFGEQVHVKSLG--DKLATVVEVPGDDDTVLVQYGK 621
V H ++D S +T P G+ V +KSLG ++A V+ D T+ V G
Sbjct: 675 TVATHTSENDPASQKKTADRQREPGVGDLVRLKSLGREGRVARVI----DAKTLEVTVGA 730
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
M++RV + ++ + ++ P R++ S S GS + E TS+ +
Sbjct: 731 MKMRVPRTDVAEVVAVAKE---TPVQGARRRGGVTVSTSTGSDDAE------YMTSE--I 779
Query: 682 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
++ G +EA +++ + A + V+HG+G G+++ + L+NHP V E
Sbjct: 780 NVIGRTADEAESEVERFVERAFLAGLPSIRVVHGVGMGILRRTLRTFLKNHPHVVSV-TE 838
Query: 740 SPMNYG 745
P N G
Sbjct: 839 PPYNEG 844
>gi|325663164|ref|ZP_08151614.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470618|gb|EGC73848.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 646
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 234/453 (51%), Gaps = 47/453 (10%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 189 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 247
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+A+ A EI+ + E+D FA+ FA ++ PI + +
Sbjct: 248 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGY------ 301
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
I+I +HPLL + VPI + +
Sbjct: 302 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 326
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 327 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 386
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALATSIL YL +R +
Sbjct: 387 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 446
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 447 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 506
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+ ERL Q +L L RR +E + + A+ E+ L +++E + + L
Sbjct: 507 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREVEALKQKLEQKQERL 561
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 539
D R + + ++ L AK D +++F
Sbjct: 562 DERKERIINEANEKANAILREAKEVADETMKNF 594
>gi|354806618|ref|ZP_09040099.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
gi|354514802|gb|EHE86768.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
Length = 787
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 332/677 (49%), Gaps = 93/677 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
++T R R + +K ++ G+ + S+SG T FMEP+ +E NN +L E E
Sbjct: 188 IVTIRNDRYVIPVKQEYRGQF-GGVVHDQSASGQTLFMEPQALMELNNRLRQLQIEEQQE 246
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL+ L+ I I + + ++D A+A A+ + P+++ ++HV +
Sbjct: 247 IERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPLINLENHVELKQA 306
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+HPL+ +P K V DI +
Sbjct: 307 ------RHPLI---------------DPAKV--------------------VANDIAIGA 325
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
+ + +V+TGPNTGGKT ++KTLGL +M+++GL++ A+ ++ F I ADIGD QS+E
Sbjct: 326 DYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSDIFADIGDEQSIE 385
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL--- 383
QNLSTFS H+ I+ IL+ + SLVL+DE+G+GTDP EG ALA +IL D++G+
Sbjct: 386 QNLSTFSAHMENIIQILQHIDDRSLVLLDELGAGTDPQEGAALAIAIL----DQIGIVGA 441
Query: 384 -AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 442
V +THY +L + NA+ EF + TL+PTYR+L G G SNA +I+ +G
Sbjct: 442 DVVASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSNAFDISTRLGLPS 501
Query: 443 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 502
I+Q+A++L + E Q + + L +R+ E++ + AE DL++++
Sbjct: 502 SIVQQAKQL---MNDESQD--LNNMITDLENQRKAAETEYQALRHELAEATDLHQQLSTA 556
Query: 503 AKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE- 559
+ DR KAKE + + A+V+ D V+ +LRD ++ + IKE++
Sbjct: 557 YQQFFEDRETEMTKAKE--KANAIVEKAEVKADKVI----TKLRDMQMNQ-GAQIKENQL 609
Query: 560 -SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
A + + + H+ V + T + G+ V V S G + V ++ D
Sbjct: 610 IDAKSELGQLHQETTLKKNKVLQRAKRRQTLKEGDDVLVTSYGQRGTLVRQI--DAKNWE 667
Query: 617 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 676
VQ G +++++ ++ K+K + P+ R + S A Y
Sbjct: 668 VQMGIIKMKIANEDL-----EKQKVVEDNRPQ-------RHVTTVNSGG--ARY------ 707
Query: 677 SKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 734
K LDLRG R EEA ++D + A + + ++HG GTG +++ V + L+ + +V
Sbjct: 708 VKAQLDLRGKRYEEAMAEVDQYVDAALLANYQQVTIVHGKGTGAIRQGVQDYLKGNRQVK 767
Query: 735 KYEQESPMNYGCTVAYI 751
KYE +P N G A I
Sbjct: 768 KYEY-APANAGGNGATI 783
>gi|237743809|ref|ZP_04574290.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
gi|229432840|gb|EEO43052.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
Length = 778
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 210/777 (27%), Positives = 373/777 (48%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRVIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEQSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP +
Sbjct: 285 ENRCEIPTVSNREILSLEKA------RHPFI----------------------------- 309
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
D VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 310 ------DKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKVNFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEV------------- 673
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
P ++ +E ++ +++++ ++ +DLRG V+EA ++L+ L
Sbjct: 674 -----PFDEIKVVEEKKEKVYNMNTHKKTPV-------RSEIDLRGKMVDEAVYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + ++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYVIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|417922412|ref|ZP_12565900.1| MutS2 family protein [Streptococcus cristatus ATCC 51100]
gi|342832509|gb|EGU66804.1| MutS2 family protein [Streptococcus cristatus ATCC 51100]
Length = 778
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 211/725 (29%), Positives = 337/725 (46%), Gaps = 119/725 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
ASE+L IR R ++ + ++ + +I + G + ++ R R + +K +++
Sbjct: 148 ASEELSRIR----RKIQENEVQVRDILQEILKTKGDMLADQVVASRNGRNVLPVKNTYRN 203
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V N E E IL ++ I EI
Sbjct: 204 RIA-GVVHDISASGSTVYIEPRAVVNLNEEIASSRADERYEIQRILQAMSDMIRPHAAEI 262
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +DL A+ F Q V P LS + + S ++HPL
Sbjct: 263 ANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQLLS------VRHPL--------- 307
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+EN+ V D+ + +VITGPNTGGKT +
Sbjct: 308 -------------IENA---------------VANDLHFGPDLTAIVITGPNTGGKTIML 339
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 340 KTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQ 399
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + EN
Sbjct: 400 VDSESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIEMDWVEN 459
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLVERL 455
A+ EF ++LRPTYR + G G SNA IA+ +G I+ AQ +++ERL
Sbjct: 460 ASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDSDVNRIIERL 519
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
E + LES+ R +D RE+E E +R L
Sbjct: 520 ------------------EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYN 552
Query: 516 KETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEA 568
+ ++ + ELN A+++ +V + L D S+ + + +I E+++ + +
Sbjct: 553 EFNREKETELNKARLEAQEIVDMALAESESILKNLHDKSSLKPHEII-EAKAQLKKLAPE 611
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
V + + P+ G+ + V S G + V + D Q G +++ +++
Sbjct: 612 TVDLSKNKVLQQAKKNRAPKVGDDILVTSYGQRGTLVKHLK--DGRWEAQVGLIKMTLEE 669
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ K +Q + +Q SN + GP+ + LDLRG R
Sbjct: 670 QEFNLLKAEK-----------EQQPKRKQVNVVKRSN---TNGPKAR-----LDLRGKRY 710
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGC 746
EEA +LD I A + + + +IHG+GTGV++E V + LR + +V + +P N G
Sbjct: 711 EEAMEELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKQVKSFGY-APQNAGG 769
Query: 747 TVAYI 751
+ A I
Sbjct: 770 SGATI 774
>gi|321312391|ref|YP_004204678.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
gi|320018665|gb|ADV93651.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
Length = 785
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 360/739 (48%), Gaps = 94/739 (12%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 81
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 129 LSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASKM--- 184
Query: 82 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN +
Sbjct: 185 -LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKV 242
Query: 142 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSH 200
E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 243 KEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMNDTGF 301
Query: 201 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 260
I ++ +HPLL P V N
Sbjct: 302 ------IRLKKARHPLL----------------PPDQVVAN------------------- 320
Query: 261 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 320
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ + ADIG
Sbjct: 321 DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIG 380
Query: 321 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 380
D QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 381 DEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRT 440
Query: 381 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 440
+ TTHY +L NA+ EF +ETL PTY++L G G SNA I+K +G
Sbjct: 441 NARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL 500
Query: 441 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 500
II +A+ + + + + SL + +++ E + S+ E L++E++
Sbjct: 501 PDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQ 555
Query: 501 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 560
+ +L+ + + + QQ +++ A + + ++ + + + + + + LI ++
Sbjct: 556 QQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN-AKK 614
Query: 561 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 620
+ + A +T F P G++V V + G K T++E G ++ VQ G
Sbjct: 615 RLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIG 670
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++++VK+ ++ I ++ P P+ K A G S
Sbjct: 671 ILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHVSLE- 709
Query: 681 LDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV-- 733
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH V
Sbjct: 710 LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKS 766
Query: 734 AKYEQESPMNYGCTVAYIK 752
+++ + G TV +K
Sbjct: 767 SRFGEAGEGGSGVTVVELK 785
>gi|322386149|ref|ZP_08059783.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
gi|321269841|gb|EFX52767.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
Length = 780
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 211/725 (29%), Positives = 337/725 (46%), Gaps = 119/725 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
ASE+L IR R ++ + ++ + +I + G + ++ R R + +K +++
Sbjct: 150 ASEELSRIR----RKIQENEVQVRDILQEILKTKGDMLADQVVASRNGRNVLPVKNTYRN 205
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V N E E IL ++ I EI
Sbjct: 206 RIA-GVVHDISASGSTVYIEPRAVVNLNEEIASSRADERYEIQRILQAMSDMIRPHAAEI 264
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +DL A+ F Q V P LS + + S ++HPL
Sbjct: 265 ANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQLLS------VRHPL--------- 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
+EN+ V D+ + +VITGPNTGGKT +
Sbjct: 310 -------------IENA---------------VANDLHFGPDLTAIVITGPNTGGKTIML 341
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 342 KTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQ 401
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + EN
Sbjct: 402 VDSESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIEMDWVEN 461
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLVERL 455
A+ EF ++LRPTYR + G G SNA IA+ +G I+ AQ +++ERL
Sbjct: 462 ASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVGHAQEQTDTDSDVNRIIERL 521
Query: 456 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 515
E + LES+ R +D RE+E E +R L
Sbjct: 522 ------------------EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYN 554
Query: 516 KETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEA 568
+ ++ + ELN A+++ +V + L D S+ + + +I E+++ + +
Sbjct: 555 EFNREKETELNKARLEAQEIVDMALAESESILKNLHDKSSLKPHEII-EAKAQLKKLAPE 613
Query: 569 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
V + + P+ G+ + V S G + V + D Q G +++ +++
Sbjct: 614 TVDLSKNKVLQQAKKNRAPKVGDDILVTSYGQRGTLVKHLK--DGRWEAQVGLIKMTLEE 671
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ K +Q + +Q SN + GP+ + LDLRG R
Sbjct: 672 QEFNLLKAEK-----------EQQPKRKQVNVVKRSN---TNGPKAR-----LDLRGKRY 712
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGC 746
EEA +LD I A + + + +IHG+GTGV++E V + LR + +V + +P N G
Sbjct: 713 EEAMEELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKQVKSFGY-APQNAGG 771
Query: 747 TVAYI 751
+ A I
Sbjct: 772 SGATI 776
>gi|225869842|ref|YP_002745789.1| DNA mismatch repair protein [Streptococcus equi subsp. equi 4047]
gi|254766601|sp|C0MAV6.1|MUTS2_STRE4 RecName: Full=MutS2 protein
gi|225699246|emb|CAW92550.1| putative DNA mismatch repair protein [Streptococcus equi subsp.
equi 4047]
Length = 778
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 210/718 (29%), Positives = 343/718 (47%), Gaps = 105/718 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKY 105
AS +LE IR R + N + +++ I QA + + LI R R + +K ++++
Sbjct: 147 ASPELESIR----RQISNKEHASRQLLQDILKKQAAYLSESLIASRNGRSVLPVKNTYRH 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V N +L E E IL L+ ++ R +
Sbjct: 203 KVA-GVVHDMSASGSTVYIEPRALVSLNEELTQLQTDERHEIGRILHELSEQLRPHSRSL 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +DL A+ + Q P++S D S+ + +HPL
Sbjct: 262 RNNAWLLGHLDLVRAKYLYMQAKQATVPVISD------DKSLQLLNARHPL--------- 306
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
++N PV D+ + V+VITGPNTGGKT +
Sbjct: 307 -------------IQN---------------PVANDLHFANDLAVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M+++GL + A R+ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 339 KTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQ 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+SL+L DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ADSDSLILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ F +L+PTYR + G G SNA +IA+ +G I++ AQ + H +
Sbjct: 459 ASMAFDNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTA------TDHDVN 512
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
+ + L E++ LES+ R ++ +E+E + +R L + + +EL
Sbjct: 513 RIIEQL--EQQTLESRKR---------LEHIKEVEQDNLKFNRAVKKLYNEFSHAKDKEL 561
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKE-SESAIAAIVEA-HR-----PDDDFS-- 576
A ++ +V + A +D I S + E +E I+EA HR P+ S
Sbjct: 562 EKAALEAREIV-----DIALAESDSILSQLHEKAELKPHEIIEAKHRLKQLAPEQSLSQN 616
Query: 577 -VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
V + P+ G+ + V + G + + ++ D Q G +++ +K++ +
Sbjct: 617 KVLKKAKKWRAPRVGDDIIVTAYGQRGTLLAQL--KDKRWEAQVGLIKLTLKEDEFSLV- 673
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
++ A P R K + +G GPR + LDLRG R EEA +L
Sbjct: 674 -KLKEEAQQPKKRAVKVVKKAATGK----------GPRAR-----LDLRGKRYEEAMQEL 717
Query: 696 D--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGCTVA 749
D I A + S + +IHG+GTGV++E V + LR H + Y ++ GCT+A
Sbjct: 718 DAFIDQALLNNMSQVDIIHGIGTGVIREAVGKYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|422849469|ref|ZP_16896145.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
gi|325689443|gb|EGD31448.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
Length = 777
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 214/732 (29%), Positives = 342/732 (46%), Gaps = 133/732 (18%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
ASE L IR R ++ ++ ++++ +I + G + ++ R R + +K +++
Sbjct: 147 ASESLSRIR----RKIQENENQVREILQEILKNKGEMLADQVVASRNGRNVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT-------AEI 158
+ G+ ++S+SG T ++EP+ V N E E IL L+ AEI
Sbjct: 203 RI-SGVVHDISASGNTVYIEPRAVVNLNEEIASSRADERYEIQRILQELSDLFRPHAAEI 261
Query: 159 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
A + I +L DL A+ F Q V P LS + + S ++HPL
Sbjct: 262 ANNAWIIGHL-------DLVRAKVRFMQETGAVVPDLSEEQDIQLLS------VRHPL-- 306
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+EN+ V D+ + +VITGPNT
Sbjct: 307 --------------------IENA---------------VANDLHFGPDLTEIVITGPNT 331
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT +KTLGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTN 391
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
IV ILE V ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L
Sbjct: 392 IVSILEQVDSESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGI 451
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ--------- 449
+ ENA+ EF ++LRPTYR + G G SNA IA+ +G I+ AQ
Sbjct: 452 ETDWVENASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTDTDSDV 511
Query: 450 -KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 508
+++ERL E +KLES+ R +D RE+E E +R
Sbjct: 512 NRIIERL------------------EEQKLESRKR---------LDNIREVEQENLKFNR 544
Query: 509 RAAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESA 561
L + ++ + ELN A+++ +V + +L D S+ + + +I E+++
Sbjct: 545 ALKKLYNEFNREKETELNKARLEAQEIVDLALSESESILKKLHDKSSLKPHEII-EAKAQ 603
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
+ + V + + P+ G+ + V S G + V ++ D Q G
Sbjct: 604 LKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGL 661
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
+++ +++ + K + P+ ++ +++ +AG K L
Sbjct: 662 IKMTLEEQEFNLLKAEKEQQ-----PKRKQVNVVKRANTAG--------------PKARL 702
Query: 682 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
DLRG R EEA +LD I A + + + +IHG+GTGV++E V + LR + V +
Sbjct: 703 DLRGKRYEEAMEELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY- 761
Query: 740 SPMNYGCTVAYI 751
+P N G + A I
Sbjct: 762 APQNAGGSGATI 773
>gi|294506640|ref|YP_003570698.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
gi|294342968|emb|CBH23746.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
Length = 819
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 224/748 (29%), Positives = 344/748 (45%), Gaps = 69/748 (9%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L + + L +LEE I +D I D AS +L +R + + E L + L K
Sbjct: 117 YPRLADAVARATPLPDLEETIASILDENA-SIRDDASPELRRLRQQIRSKEEELRTTLDK 175
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ G T R RM + ++AS K + +G + S+SG T ++EP +E
Sbjct: 176 ALRHAVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLEL 234
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L ++E AE IL +T + I+ + + + DL A+A FA + V
Sbjct: 235 NNEVRELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVV 294
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P L+ + HV EG ++P+L L + + ++ E + +
Sbjct: 295 PKLNDEGHVEI-----YEG-RNPVL---QLHFEELGAGGATDRRASGEEEALPPREV--- 342
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H P F
Sbjct: 343 -----VPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLF 397
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
D I+ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG ALA +
Sbjct: 398 DQIVADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGESALVLIDEAGTGTDPDEGAALAQA 457
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
+L+ L + + TTH+ L + EN + EF ETLRPT+R G G S A
Sbjct: 458 VLERLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAF 517
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRP----------ERQQHRKSELYQSLMEERRKLESQA 482
IA+ +G ++ RA+ L + R Q + ELY + + R K E++
Sbjct: 518 EIARRMGLSGDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDA-RKAREKAEAEQ 576
Query: 483 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 542
+ ++ E +A + R + +E+ A+ + D Q+ Q
Sbjct: 577 QRYEEKTEKLEKERNEFRQQALEEAERIVEEANARIENTIREIKEAQAESD-ATQEAREQ 635
Query: 543 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
L D AD L E A A D S + + G+QV V D
Sbjct: 636 LEDYKAD----LQARREEAAPEQEAAPAEADGASPA---AAGGPINEGDQVVV----DDG 684
Query: 603 ATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
+T VEV +D + G M +RV + + + + +A P E+ G+A
Sbjct: 685 STAVEVQEIEDGEARLLMGSMHMRVSLDRLTRVGGPE---SAEP-------DEEDTGGNA 734
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTG 717
+ EAS S+D+RG RV+EA H LD A+A + + ++HG GTG
Sbjct: 735 EMAALEAS---------PSIDVRGERVDEARRQVQHFLDDAVAA--NLDTVEILHGKGTG 783
Query: 718 VVKERVLEILRNHPRVAKYEQESPMNYG 745
++ + E+L P V + +++P+ G
Sbjct: 784 ALRNALHEMLSGRPDVVDH-RKAPIEEG 810
>gi|168704433|ref|ZP_02736710.1| recombination and DNA strand exchange inhibitor protein [Gemmata
obscuriglobus UQM 2246]
Length = 646
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 265/523 (50%), Gaps = 65/523 (12%)
Query: 6 CGNIFHRY--------SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 57
C +RY S +++ L L + + IG CID + + LD AS DL +R
Sbjct: 98 CTGAMYRYRMRLAEHLSGIIDHLSGIEDLGTVGKSIGGCIDGRGHV-LDMASRDLAAVR- 155
Query: 58 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP--------- 108
+ L L +KV A+I + + P + K S + H Y+LP
Sbjct: 156 ------QKLFDLDEKVKAEIRRL--LRDPELRKILSYPNATVHGDH-YVLPVSVNHRHKV 206
Query: 109 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 168
+G+ VS +G T F+EP + V+L E E +L L++E+ K + + Y
Sbjct: 207 NGVVHRVSGTGETVFIEPASIANLSAERVQLKADEDREVKRVLRRLSSEVGKVSKPLIYS 266
Query: 169 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 228
++ + ++DL ARA +A+ + P ++++ + + +HPLL A
Sbjct: 267 LEVIAKLDLITARARYARDFNMWPPDVNTEGKLWLRQA------RHPLL---------EA 311
Query: 229 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 288
++P+ + SK + VPIDI++ ++VITGPNTGGKT ++KT
Sbjct: 312 MFRNDPVAEAPPPGSGSSAPSSKLKTRSVVPIDIRLGIGFNLLVITGPNTGGKTVTLKTT 371
Query: 289 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 348
GL LM++ G+++PA +P F ILADIGD QSLEQ+LSTFS HI+RI I ++
Sbjct: 372 GLLCLMAQCGMHIPAGEGSLVPVFRHILADIGDEQSLEQSLSTFSSHITRISSIFQVADE 431
Query: 349 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 408
SL+L+DE+G+GTDP+EG AL +IL L G A+VTTH DL + R EN A
Sbjct: 432 HSLILLDELGAGTDPTEGAALGRAILDQLDSVRGRAIVTTHLGDLKTYAFNNDRAENGAV 491
Query: 409 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------------L 455
EF +ET+RPTYR+ G G SNAL IA+ + + ++++A K +++ L
Sbjct: 492 EFDIETMRPTYRLHIGQFGMSNALKIARRLKLPKDLLRKAHKYLKKRKGKSGELARLQEL 551
Query: 456 RPERQQ---------HRKSELYQSLMEERRKLESQARTAASLH 489
R E +Q H + L ER L++QA A+L+
Sbjct: 552 RLEAEQAKVDALAARHEADREKEQLARERAALDNQAAERAALN 594
>gi|197302876|ref|ZP_03167928.1| hypothetical protein RUMLAC_01605 [Ruminococcus lactaris ATCC
29176]
gi|197298113|gb|EDY32661.1| MutS2 family protein [Ruminococcus lactaris ATCC 29176]
Length = 791
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 307/654 (46%), Gaps = 69/654 (10%)
Query: 86 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 145
P+IT R +R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGNRYCIPVKAEYRGQV-QGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYAREQE 244
Query: 146 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 205
E IL+ L+ E A+ EI+ + ++D FAR A M P+ + ++
Sbjct: 245 EIQIILAGLSEEAAQYIEEIRADYRALTDLDFIFARGALALSMKASRPVFNEEN------ 298
Query: 206 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 265
I+I +HPLL +P TV VPI + +
Sbjct: 299 KIHIREGRHPLL---------------DP---------KTV-----------VPITVTLG 323
Query: 266 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 325
E ++++TGPNTGGKT S+KT+GL LM +AGL++PA + +L F I ADIGD QS+
Sbjct: 324 EEFDLLIVTGPNTGGKTVSLKTVGLFCLMGQAGLHIPAGDRSQLAVFHQIYADIGDEQSI 383
Query: 326 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 385
EQ+LSTFS H++ IV L+ V SLVL DE+ +GTDP+EG ALA +IL +L + +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKKVDSHSLVLFDELCAGTDPTEGAALAIAILSHLHSQGICTM 443
Query: 386 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 445
TTHY++L ENA EF +++LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVQSLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 446 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 505
A R R Q +L L +R +E + ++L E +L + ++ +
Sbjct: 504 DDA-----RERLTEQDISFEDLLTDLETSKRTIEKEREEISALRKEAEELKSQAKERQEK 558
Query: 506 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAA 564
LD + + + ++ L AK D ++ F + + SA E+ + +
Sbjct: 559 LDEQRDRILREANEKANAILRDAKEVADETIRKFHKFGKENISAAEMEKERERIRKKVND 618
Query: 565 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 624
A E S F + GE V V S+ + TV +P + VQ G +R
Sbjct: 619 TAAASSLKSKKPKKEHKPSDF--KLGESVKVLSM-NLTGTVSSLPDARGNLTVQMGILRS 675
Query: 625 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 684
+V +++ I A ++ +R S + S P + +L
Sbjct: 676 QVNISDLEIIEEPSSYGA---------KKMNRTSKGKIKMGKSLSVRPEI-------NLL 719
Query: 685 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
G V+EA +LD L A + V+HG GTG +++ + E LR V Y
Sbjct: 720 GRTVDEAVAELDKYLDDALLAHLYTVRVVHGKGTGALRKGIHEYLRRQKHVKSY 773
>gi|340357348|ref|ZP_08679966.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
gi|339617796|gb|EGQ22410.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
Length = 785
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 223/741 (30%), Positives = 347/741 (46%), Gaps = 97/741 (13%)
Query: 25 FLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQ 79
LT +E +I ID ++ D AS L IR + R E L+S + K AA++
Sbjct: 129 ILTGVEHEINAAIDDNGRVV-DSASSALRSIRQSLRVQESRVRERLESYTRGKNAAKM-- 185
Query: 80 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR- 138
+ ++T R R + +KA ++ G+ ++SSSG T F+EP V+ NN E+R
Sbjct: 186 ---LSDAIVTIRNDRYVIPVKAEYRSHY-GGVIHDMSSSGQTLFIEPDAVVQANN-EIRS 240
Query: 139 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 198
L E E IL L+A + + ++ L+ + EID+ A+A + P
Sbjct: 241 LKVKEQEEIEKILLALSASVREVAHDLFTLVQLLAEIDVILAKAKYGTANKCTKPA---- 296
Query: 199 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 258
V+ D + + +HPLL P++ V N+
Sbjct: 297 --VNADGYMRLTKARHPLL----------------PIEEAVANT---------------- 322
Query: 259 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 318
I+ + +VITGPNTGGKT ++KT+GL +LM+++GL +P + + FD I AD
Sbjct: 323 ---IEFGQDITTIVITGPNTGGKTVTLKTVGLCTLMAQSGLPIPVLDGSEIAVFDSIYAD 379
Query: 319 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 378
IGD QS+EQ+LSTFS H+ IVDIL+ SL+L DE+GSGTDP EG ALA SIL +
Sbjct: 380 IGDEQSIEQSLSTFSSHMVNIVDILKKFDDRSLLLFDELGSGTDPQEGAALAISILDEVH 439
Query: 379 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 438
+ TTHY +L NA+ EF ++TL PTYR+L G G SNA I+K +
Sbjct: 440 GSGARVMATTHYPELKAYGYNRPGVANASVEFDIDTLSPTYRLLIGVPGRSNAFEISKRL 499
Query: 439 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 498
G II RA+ R E + SL R + E A L E L +E
Sbjct: 500 GLHNHIIDRAKGFTGEDRGE-----VDSMIASLETSRVQSEKDAERTHDLLLETEQLKKE 554
Query: 499 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 558
+ + + + + L ++ ++ + AK + + V+ D +A A +KE
Sbjct: 555 LNAKLAEFEEQKERLTEAAKERAKKIVEKAKSESEAVISDLRALRMNAGAS-----VKEH 609
Query: 559 ESAIA-AIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVL 616
E A +E+ P + + ++ P Q G++V V + G K T+VE D + V
Sbjct: 610 ELIEARKRLESATPAEKKKKAIKAKAAPRPLQKGDEVKVLAYGQK-GTLVEKVSDKEWV- 667
Query: 617 VQYGKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 675
V+ G +++++ + + + P ++K + A R R SG
Sbjct: 668 VEIGILKMKLPELGLEYVKPEKEKKQVTSAAVRGR-------SGHV-------------- 706
Query: 676 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
K LDLRG R E+A + + I A + + +IHG GTG +++ V + L+ H RV
Sbjct: 707 --KLELDLRGERYEDAIARTEKYIDDALLSNYHQVSIIHGKGTGALQKGVQQYLKKHSRV 764
Query: 734 AKYE--QESPMNYGCTVAYIK 752
Y + +G T+ +K
Sbjct: 765 NSYRFGEAGEGGHGVTIVELK 785
>gi|423071359|ref|ZP_17060133.1| MutS2 protein [Streptococcus intermedius F0413]
gi|355363833|gb|EHG11568.1| MutS2 protein [Streptococcus intermedius F0413]
Length = 777
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 216/736 (29%), Positives = 343/736 (46%), Gaps = 141/736 (19%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHK 104
AS++L IR R ++ + ++ + I + G +D+ ++ R R + +K + +
Sbjct: 147 ASDNLARIR----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFR 201
Query: 105 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL---------- 154
+ G+ ++S+SG T ++EP+ V N ++N++ E IL +L
Sbjct: 202 NRI-SGVVHDISASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPH 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AEIA + I +L DL A+ F Q V P+LS I + + H
Sbjct: 258 IAEIANNAWIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTH 304
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL +EN+ V D+ + +VIT
Sbjct: 305 PL----------------------IENA---------------VANDLYFASDLTEIVIT 327
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT +KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS
Sbjct: 328 GPNTGGKTIMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSS 387
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ IV ILE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L
Sbjct: 388 HMTNIVAILEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELK 447
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----- 449
+ +NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ
Sbjct: 448 AYGIEMAGVQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNT 507
Query: 450 -----KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+++ERL E + LES+ R +D RE+E E
Sbjct: 508 DSDVNRIIERL------------------EEQTLESRKR---------LDNIREVEQENL 540
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKE 557
+R L + ++ + ELN A+++ +V + L D S+ + + +I E
Sbjct: 541 KFNRALKKLYNEFNRERETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-E 599
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+++ + + V + + P+ G+ + V S G + V ++ D
Sbjct: 600 AKAQLKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEA 657
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++ +++ + K + P+ RKQ + GPR +
Sbjct: 658 QVGLIKMTLEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-- 701
Query: 678 KNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
LDLRG R EEA +LD I A + + + +IHG+GTGV++E V + LR + V
Sbjct: 702 ---LDLRGKRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKS 758
Query: 736 YEQESPMNYGCTVAYI 751
+ +P N G + A I
Sbjct: 759 FGY-APQNAGGSGATI 773
>gi|148270617|ref|YP_001245077.1| MutS2 family protein [Thermotoga petrophila RKU-1]
gi|189030430|sp|A5IMS8.1|MUTS2_THEP1 RecName: Full=MutS2 protein
gi|147736161|gb|ABQ47501.1| MutS2 family protein [Thermotoga petrophila RKU-1]
Length = 757
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 336/745 (45%), Gaps = 101/745 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS L E + + E++ CI+ I DRAS L IR E+KR L S +K+
Sbjct: 106 YSRLKETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKR 160
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A + + + + R R +KAS + + GI ++SSSGAT F+EP V
Sbjct: 161 KADDFVRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFV 219
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 220 ELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNG 279
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V S I + +HPL+ +
Sbjct: 280 TV--------VKPSSRIRLVNARHPLIPKERV---------------------------- 303
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L
Sbjct: 304 -------VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELK 356
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA
Sbjct: 357 VFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALA 416
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+I++ L ++ VTTH + NA+ EF ETL PTYR+L G G S+
Sbjct: 417 VAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSH 476
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G D++II+ A R R R++ L +SL E+ LE + R
Sbjct: 477 AFQIAEKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKERE 531
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E M L + E++ K L R KE +++ + K ++D + + + S DE
Sbjct: 532 EYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDE 587
Query: 551 INSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +K +E + D + + E P G+ V ++ G + VVEV
Sbjct: 588 MREAVK--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV- 635
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
T LV +G +R++V P+ K+ + S
Sbjct: 636 -KSGTALVDFGFLRLKV------PVSKLKKAKKE-----------------EKEESSAVS 671
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
Y P + + +D+RGM VEEA + I S ++IHG GTG + V EIL
Sbjct: 672 YRP--SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEIL 729
Query: 728 RNHPRVAKYEQESPMNYGCTVAYIK 752
R RV + +P G V ++
Sbjct: 730 RKDKRVVSFRFGTPSEGGTGVTVVE 754
>gi|392428087|ref|YP_006469098.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
gi|419776965|ref|ZP_14302883.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|383845176|gb|EID82580.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|391757233|dbj|BAM22850.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
Length = 777
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 216/736 (29%), Positives = 343/736 (46%), Gaps = 141/736 (19%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHK 104
AS++L IR R ++ + ++ + I + G +D+ ++ R R + +K + +
Sbjct: 147 ASDNLARIR----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFR 201
Query: 105 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL---------- 154
+ G+ ++S+SG T ++EP+ V N ++N++ E IL +L
Sbjct: 202 NRI-SGVVHDISASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPH 257
Query: 155 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 214
AEIA + I +L DL A+ F Q V P+LS I + + H
Sbjct: 258 IAEIANNAWIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTH 304
Query: 215 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 274
PL +EN+ V D+ + +VIT
Sbjct: 305 PL----------------------IENA---------------VANDLYFASDLTEIVIT 327
Query: 275 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 334
GPNTGGKT +KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS
Sbjct: 328 GPNTGGKTIMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSS 387
Query: 335 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 394
H++ IV ILE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L
Sbjct: 388 HMTNIVAILEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELK 447
Query: 395 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----- 449
+ +NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ
Sbjct: 448 AYGIEMAGVQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNT 507
Query: 450 -----KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 504
+++ERL E + LES+ R +D RE+E E
Sbjct: 508 DSDVNRIIERL------------------EEQTLESRKR---------LDNIREVEQENL 540
Query: 505 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKE 557
+R L + ++ + ELN A+++ +V + L D S+ + + +I E
Sbjct: 541 KFNRALKKLYNEFNREKETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-E 599
Query: 558 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
+++ + + V + + P+ G+ + V S G + V ++ D
Sbjct: 600 AKAQLKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEA 657
Query: 618 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 677
Q G +++ +++ + K + P+ RKQ + GPR +
Sbjct: 658 QVGLIKMTLEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-- 701
Query: 678 KNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 735
LDLRG R EEA +LD I A + + + +IHG+GTGV++E V + LR + V
Sbjct: 702 ---LDLRGKRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKS 758
Query: 736 YEQESPMNYGCTVAYI 751
+ +P N G + A I
Sbjct: 759 FGY-APQNAGGSGATI 773
>gi|95929001|ref|ZP_01311746.1| MutS2 family protein [Desulfuromonas acetoxidans DSM 684]
gi|95134902|gb|EAT16556.1| MutS2 family protein [Desulfuromonas acetoxidans DSM 684]
Length = 788
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 224/755 (29%), Positives = 355/755 (47%), Gaps = 98/755 (12%)
Query: 14 SPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
+PLL + L EL E+I I +LD AS L +R++ K + ++L+
Sbjct: 113 APLLAADVGELQLLAELREQIKASIGPAG-DVLDEASWRLSDLRSQIKVLRGRIRAVLES 171
Query: 73 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 132
+ + G ++T R R V ++A ++ + G + SSSG T F+EP +E
Sbjct: 172 MLSNSDYDGVFQDQIVTDRNGRYVVPVRADYRGRV-KGFVHDESSSGQTLFIEPAAVLER 230
Query: 133 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 192
NN L E E IL L A + ++ ++ + + ++D A A FA+
Sbjct: 231 NNTLQSLRREEQREIERILLELAAMVGEARGPLRRNQEILAQLDFTCAVARFAELTKACA 290
Query: 193 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 252
P L+++ + + ++HPLLL +GS +
Sbjct: 291 PQLTTKRQ------LELREVRHPLLL---------------------------LGSDGRP 317
Query: 253 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 312
+ V ID+++ + ++I+GPNTGGKT ++KT+GL LM AGL +P H R+ F
Sbjct: 318 RAQKTVAIDLRLGKKHDTLIISGPNTGGKTVALKTVGLLFLMVSAGLPIPCHPHSRVYLF 377
Query: 313 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 372
+ ADIGD QS+E+NLSTFSGH+ R+ ILE V +SLVL+DE G+GTDP+EG ALA +
Sbjct: 378 SRVFADIGDEQSIEENLSTFSGHLLRMRRILEQVDGDSLVLLDEAGTGTDPAEGGALALA 437
Query: 373 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 432
++ LR VVTTH + ++R ENAA EF ETL PTYR+ +G G S+A
Sbjct: 438 VMDRLRAIGARTVVTTHLNMIKSCAYLESRVENAAVEFDPETLAPTYRLHYGVPGASSAF 497
Query: 433 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 492
IA+++G K++ RA + + ++ + + L + + +LE Q R A L E
Sbjct: 498 TIARNMGIPAKVLDRANQYL-----GSEERDGLAMVEQLNQVQNRLEQQLREAEELRNEA 552
Query: 493 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--- 549
R+ KD + + L K ++ +Q +N + ++ +++ Q RD
Sbjct: 553 AAEQRKRLKLLKDFEAQREKLLDKARRRAEQLVNETQGKMKKLLK----QARDMQGGDGR 608
Query: 550 ---EINSLIKESESAIAAIVEA----HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 602
E+ ++ES + VE H PD +SE GE V V +L +
Sbjct: 609 QQAELMRQVRESREELPTPVEVKRQRHAPD---QLSE----------GELVRVVALNAE- 654
Query: 603 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 662
A V + GD+ + V MR +P S + +PR R + + G
Sbjct: 655 ARVERLSGDEVELNVNGKVMR----------LPLSALEAF---SPR-RFAEAKTKRGGTK 700
Query: 663 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTG 717
S + + + PR LD+ G RVEEA Q+ D L W+ S V+HG GTG
Sbjct: 701 SQVDRSRFNPR-------LDVVGCRVEEALPQVERLIDDALLNNWKDIS---VVHGRGTG 750
Query: 718 VVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 752
+++ + E+L +H V + + G V I+
Sbjct: 751 ALRQAIQELLAHHRAVTSFHAADNAHGGTAVTEIE 785
>gi|347525834|ref|YP_004832582.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 27782]
gi|345284793|gb|AEN78646.1| DNA mismatch repair protein [Lactobacillus ruminis ATCC 27782]
Length = 786
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 337/688 (48%), Gaps = 111/688 (16%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T R R + +KA +K GI + SSSG T F+EPK VE NN RL +IAE
Sbjct: 188 LVTIRNERYVIPVKAEYKNAF-GGIVHDQSSSGQTLFIEPKEIVELNN---RLRQQQIAE 243
Query: 147 ETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
+ I L L+ IA EI+ + + D A+A A + P++S ++ V
Sbjct: 244 KEEIKRILEELSELIAPYTEEIENNAKILGKFDFINAKAKLAHDLKATQPLISRENDVY- 302
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
+ + HPLL K V N D+
Sbjct: 303 -----LRQVWHPLL----------------DSKKAVRN-------------------DVA 322
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
+ + + +VITGPNTGGKT ++KTLGL S+M ++GL++PA + R+ FD I ADIGD Q
Sbjct: 323 IGKDYQAIVITGPNTGGKTITLKTLGLVSMMGQSGLFIPAFENSRIGVFDDIFADIGDEQ 382
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
S+EQ+LSTFS H++ V+IL+ + SLVL DE+G+GTDP EG ALA +IL + +
Sbjct: 383 SIEQSLSTFSSHMTNTVEILKSIDERSLVLFDELGAGTDPQEGAALAIAILDAVGAKGSY 442
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
V TTHY +L + + NA+ EF ETL+PTY +L G G SNA +I+K +G D +
Sbjct: 443 VVATTHYPELKAYGYERPQTINASMEFDAETLKPTYHLLIGIPGRSNAFDISKRLGLDDE 502
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-AR------TAASLHAEIMDLY 496
I++ A+KL ++ +E+ L+++R + E + AR + LHA++ Y
Sbjct: 503 IVEAARKLT-----DQDSQDLNEMIADLVQKRHEAEEEKARFKKYLDESEKLHADLEKGY 557
Query: 497 ----REIEDEAKDLDRRAAHL---KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 549
RE ++ ++ R+A + K+++++ EL+ K ++++ EN+L DA +
Sbjct: 558 GTYVRERDNMIENAKRKANEIIENAQKKSEEIISELHKMKQSGASLIK--ENELIDARS- 614
Query: 550 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSLGDKLATVVEV 608
+N L + +++ + +F N +G++ V K LG
Sbjct: 615 RLNDLEQPIMLKKNKVLQRAKKQQEF---HENDDVLVKTYGQRGVLTKRLGKHEWE---- 667
Query: 609 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 668
VQ G +++++ ++++ I ++ R +G+ S+ +
Sbjct: 668 --------VQLGILKMKIDEDDLEKIK--------------VEENNRRGAGTVLKSSGSS 705
Query: 669 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 726
P+ LDLRG R EEA +D + A + ++HG GTG +++ +++
Sbjct: 706 HVSPQ-------LDLRGQRYEEAMVNVDRYMDAAILAGYPSVTIVHGKGTGALRQGIIKY 758
Query: 727 LRNHPRVAKYEQESPMN--YGCTVAYIK 752
L+ H V +E SP N G TV Y K
Sbjct: 759 LQQHRTVKHFEFASPSNGGNGATVVYFK 786
>gi|421895098|ref|ZP_16325576.1| MutS2 family protein [Pediococcus pentosaceus IE-3]
gi|385272018|emb|CCG90948.1| MutS2 family protein [Pediococcus pentosaceus IE-3]
Length = 785
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 214/748 (28%), Positives = 360/748 (48%), Gaps = 117/748 (15%)
Query: 26 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--- 82
+ E+EE++ I+ + L+ AS +L IRA R ++ S ++K F G
Sbjct: 129 IPEVEERLSNSIEGNGHL-LNSASSELRRIRASITRIESDVRSRMEK-----FTRGNNVK 182
Query: 83 -IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 141
+ +P++T R R + ++ ++ G+ + SSSG T ++EP+ V+ NN E+R +
Sbjct: 183 YLSEPIVTIRNERYVIPVRVEYRSKFG-GVVHDQSSSGQTLYVEPESVVDLNN-ELRQNQ 240
Query: 142 -SEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQS 199
+E+ EE IL L+A +A +K R+L +DL A+A +A + P
Sbjct: 241 VAEVHEEQRILQELSALVAPYTYTLKD-NSRILGHLDLLNAKAQYAHQLKATEP------ 293
Query: 200 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 259
+S + IN+ +HPL+ K V N
Sbjct: 294 QISASNEINLREARHPLI----------------DQKKVVSN------------------ 319
Query: 260 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 319
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADI
Sbjct: 320 -DIRLGGEYETLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADI 378
Query: 320 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 379
GD QS+EQNLSTFS H+ + IL ++ SL L DE+G+GTDP EG ALA +IL +R
Sbjct: 379 GDEQSIEQNLSTFSSHMDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRS 438
Query: 380 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 439
+++ TTHY +L + NA+ EF ++TL+PTY++L G G SNA I+K +G
Sbjct: 439 TGAVSMTTTHYPELKTYGYERMGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISKRLG 498
Query: 440 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 499
D II +A+ LV+ + Q L + L ++ + A ++ + ++L ++
Sbjct: 499 LDSDIISQARGLVD------------QDSQDLNNMIKDLTTRQKRAQKINQQAVELLKQA 546
Query: 500 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 559
E+ + L + L ++ + ++ AK + +V D + A AD I +++ E
Sbjct: 547 EEYHQTLVKGVDSLNSQRSNLIES----AKEDANRIVNDSQ-----AEADRIIKRLRKLE 597
Query: 560 SAIAAIVEAHRPDDDFSVS----ETN--------TSSFTPQFGE--QVHVKSLGDKLATV 605
+ + E D ++ +TN + +F E +V V + G + +
Sbjct: 598 HSTGSFKENDLIDAKSKINALHQDTNLKRNKVLRRAKEAQKFHENDEVVVLTYGQRGELL 657
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+V D VQ G M+++V + + + K + R +++ SAG
Sbjct: 658 RQV--DKKHWEVQMGIMKMKVAVDELEKVKPDK-------TVKRRVHNSVQRTASAG--- 705
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV 723
K +LDLRG R EEA + D I A + ++HG GTG ++ +
Sbjct: 706 -----------VKTTLDLRGKRYEEALTETDRYIDAALLAGYDEVTIVHGKGTGALRSGI 754
Query: 724 LEILRNHPRVAKYEQESPMNYGCTVAYI 751
+ L+N+ R+ +E +P N G A I
Sbjct: 755 TKYLKNNRRIKAFEY-APANAGGNGATI 781
>gi|332522497|ref|ZP_08398749.1| MutS2 family protein [Streptococcus porcinus str. Jelinkova 176]
gi|332313761|gb|EGJ26746.1| MutS2 family protein [Streptococcus porcinus str. Jelinkova 176]
Length = 777
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 205/719 (28%), Positives = 345/719 (47%), Gaps = 108/719 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L IR R M + +S ++++ I + G + + LI R R + +K ++++
Sbjct: 147 ASPELATIR----RKMTDSESRVRQLLQDILKKYGDFLSESLIASRNGRSVLPVKNTYRH 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG T ++EP+ V+ N +L E E T IL L+ + R +
Sbjct: 203 KVA-GVVHDISASGNTVYIEPRALVQLNEEITQLHADERHEITRILRSLSDMLRSHSRAL 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D F +A + +D S +S D SI + ++HPLL
Sbjct: 262 TNNAWLIGHLD--FVKAKYLYLIDHKA----SLPKISSDKSIQLLNVRHPLLKN------ 309
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PVP D+ + V+VITGPNTGGKT +
Sbjct: 310 -------------------------------PVPNDLHFSRQLSVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M ++GL + A + F I ADIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 339 KTLGLAQIMGQSGLPILADQGSSIAVFTDIFADIGDEQSIEQSLSTFSSHMTNIVAILDK 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
++SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ADQDSLVLFDELGAGTDPQEGASLAMAILEQLRLTEIKTMATTHYPELKAYGIETAFVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF +L+PTY + G G SNA IA+ +G I+ +A+++ + S
Sbjct: 459 ASMEFDSRSLKPTYHFMQGVPGRSNAFEIARRLGLADHIVNQAEQMTD---------SDS 509
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + E E++ LES+ R +D +E+E + +R L + Q +E
Sbjct: 510 DVNRIIEELEKQTLESRHR---------LDHIKEVEQDNLKFNRAVKKLYHEFAQAKNKE 560
Query: 525 LNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS- 576
+ A ++ +V ++ +L +AS + + +I E++S + ++ P + +
Sbjct: 561 IEKASLEAQEIVTLALAESEEILAKLHEASVLKPHQII-EAKSQLKKLI----PQTELTQ 615
Query: 577 --VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
V + PQ G+ + V + G + + +V G+ Q G +++ + ++ + +
Sbjct: 616 NKVLKKAKKLRQPQVGDDILVTAYGQRGTLLKQVKGNKWE--AQVGLIKMTLTEDEFQLV 673
Query: 635 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 694
A + + +KQ + + GPR + LDLRG R EEA +
Sbjct: 674 ------KVAEESQKTKKQ-------TLNVVKRSTNNGPRAR-----LDLRGKRYEEAMQE 715
Query: 695 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGCTVA 749
LD I A + S + +IHG+GTGV++E V + LR H + Y ++ GCT+A
Sbjct: 716 LDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIA 774
>gi|315652943|ref|ZP_07905909.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315484801|gb|EFU75217.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 785
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 212/733 (28%), Positives = 340/733 (46%), Gaps = 88/733 (12%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L E + + L++++ CI + I+ D AS +L IR R + ++S +
Sbjct: 114 YDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSHIR----RKINQINSKMYT 168
Query: 73 VAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
I A + +IT+R C+ IK+ +K + G+ + SS+G+T F+EP +
Sbjct: 169 ELNNILNAHREYLMDSVITQRDGAYCLPIKSEYKNKVA-GVVHDRSSTGSTVFIEPLAII 227
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
NN LS E E IL L+ A ++ ++ +D +A+A ++ M+G
Sbjct: 228 RMNNELKSLSMDEKKEIEKILESLSLFAADYINILENNSKNLIFLDFVYAKANLSKKMNG 287
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
P +S+ + INI+ +HPLL +
Sbjct: 288 SEPKFNSKHY------INIKEGRHPLLDTKKV---------------------------- 313
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI+I + +++ITGPNTGGKT S+KT+GL ++M ++GL++PA L
Sbjct: 314 -------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGLFTIMGQSGLHIPAFEGSELS 366
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
FD + ADIGD QS+EQ+LSTFSGH+ IV IL SL L DE+ +GTDP+EG ALA
Sbjct: 367 VFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAGSLCLFDELCAGTDPTEGAALA 426
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
SIL +L + TTHY++L + ENA+ EF + TL PTYRIL G G SN
Sbjct: 427 ISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVPGKSN 486
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA +G II A +E+ + + +L L +R+ +E +
Sbjct: 487 AFAIAGKLGLPDYIISEAGTHLEKDAKDFE-----DLLAKLENDRQIIEKDKLSIQKYKR 541
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-- 548
EI L R + + ++L + + + + ++ L AKV D +++ N++ +
Sbjct: 542 EIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEAKVTADDTIKNI-NKIASGAGLG 600
Query: 549 ---DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 605
+E + ++ES + VE +P + + G+ VHV SL V
Sbjct: 601 FALEEQRTRLRESINKNTKSVEVKKP------TNKLKKPKELKLGDSVHVISLNLD-GIV 653
Query: 606 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 665
+P + VQ G +R +V ++I I +K P + R S GSS
Sbjct: 654 SSLPNQSGNLFVQMGILRSQVNISDIAQIEEPDKK----PENKTR---------SRGSSM 700
Query: 666 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 723
+++ T ++L G V+EA +LD L A + +IHG GTG +++ +
Sbjct: 701 VKSA------TISTEINLIGKNVDEACSELDKYLDDALLAHLPGVRIIHGRGTGALQKGI 754
Query: 724 LEILRNHPRVAKY 736
L+ + Y
Sbjct: 755 HAYLKRQSFIKSY 767
>gi|408402357|ref|YP_006860321.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407968586|dbj|BAM61824.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 778
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 214/723 (29%), Positives = 349/723 (48%), Gaps = 115/723 (15%)
Query: 48 ASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 103
AS +LE IR ++++ N L LLKK Q + + LI R R + +K +
Sbjct: 147 ASPELEKIRRSISDKEHASRNVLQDLLKK------QGDYLSESLIASRNGRSVLPVKNTF 200
Query: 104 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 163
+ + G+ ++S+SG T ++EP+ V+ N +L E E + +L L+ I R
Sbjct: 201 RNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQADERHEVSRVLQALSDLIRPHSR 259
Query: 164 EIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 220
+ +++ L F RA + D + + +S D S+ + ++HPLL
Sbjct: 260 ALTNNAWILGH-----LDFIRAKYLYMRDNKATVPA----ISDDKSLQLLNVRHPLL--- 307
Query: 221 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 280
PV D+ + V+VITGPNTGG
Sbjct: 308 ----------------------------------QEPVANDLHFSKDLAVIVITGPNTGG 333
Query: 281 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 340
KT +KTLGLA LM+++GL + A ++ F I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 334 KTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIV 393
Query: 341 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 400
IL +SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L +
Sbjct: 394 AILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIET 453
Query: 401 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 460
ENA+ EF +L+PTYR + G G SNA IA+ +G I++ AQ + + +
Sbjct: 454 PYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRLGLAEHIVKEAQNMTD---TDSD 510
Query: 461 QHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
+R E L + +E R++L+ + + + LY E +AKD + A L+A+
Sbjct: 511 VNRIIEQLEKQTLESRKRLDYIREVEQDNLKFNRAVKKLYNEF-SQAKDKEIEKATLEAR 569
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 576
E ++ A + D+++ NQL D +A + + +I E++ + +V P+ S
Sbjct: 570 EI------VDLALAESDSIL----NQLHDKAALKPHEVI-EAKGQLKQLV----PEKSLS 614
Query: 577 ---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN--- 630
V + P+ G+ + V + G + V E+ D Q G +++ +K++
Sbjct: 615 QNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLVKELK--DKKWEAQVGLIKMTLKEDEFSL 672
Query: 631 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
++ + S++ P+ + +++ + G GPR + LDLRG R EE
Sbjct: 673 VKVVEESQK-------PKKKAINVVKKAATGG--------GPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + S + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGC 772
Query: 747 TVA 749
T+A
Sbjct: 773 TIA 775
>gi|403514465|ref|YP_006655285.1| MutS2 protein [Lactobacillus helveticus R0052]
gi|403079903|gb|AFR21481.1| MutS2 protein [Lactobacillus helveticus R0052]
Length = 785
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 209/730 (28%), Positives = 345/730 (47%), Gaps = 111/730 (15%)
Query: 44 ILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS L +R + + N E+ +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSSLAR 259
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQ------DHSLELRNARHPLI-- 311
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
+P K VP +I++ + ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNNIRLGDDFDTMLITGPNTG 338
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT ++KT GL LM+++GL++P + ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPTEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -SDEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESE--SAIAAIVEAH 569
+VQ++L+FA+ + + VV R AD+I N +KE++ A +
Sbjct: 563 RVQKQLDFAQERANEVVAK-----RRKKADKIIAELEKQKNVGVKENKIIEAKGELNSLE 617
Query: 570 RPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 626
R + + V + G+QV V S G + T+ + + + VQ G ++V+V
Sbjct: 618 RQAHNLAHNKVLQREKRRHHVSVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGIIKVKV 675
Query: 627 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 686
+I I KN A P +L + A+ R + + LDLRG
Sbjct: 676 SDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAHSELDLRGQ 715
Query: 687 RVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL--RNHPRVAKYEQESPM 742
R +EA LD I A ++ +IHG+GTG +++ V + L NH + Y +
Sbjct: 716 RYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLSSSNHVKGFNYAPANEG 775
Query: 743 NYGCTVAYIK 752
G T+ +K
Sbjct: 776 GNGATIVKLK 785
>gi|94971325|ref|YP_593373.1| MutS2 family protein [Candidatus Koribacter versatilis Ellin345]
gi|94553375|gb|ABF43299.1| MutS2 family protein [Candidatus Koribacter versatilis Ellin345]
Length = 812
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 216/732 (29%), Positives = 352/732 (48%), Gaps = 104/732 (14%)
Query: 46 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 105
DRAS +L IR E +R ++ S L+ ++ G + LIT R R + +KA K
Sbjct: 154 DRASSELHRIRREIERQKRHIQSSLQSFLRKLSDEGTAQEELITIRGDRFVIPVKAEQKR 213
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ +G+ SSSG T F+EP +E NN VRL E E IL+ ++ I + +
Sbjct: 214 RV-NGVVHGASSSGQTVFVEPMETIEQNNDLVRLLEEEQEEIRRILAEMSRRIGEQSENL 272
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + + E++L FA+A FAQ + V + + + +E +HPLL
Sbjct: 273 LFALYVLAELELQFAKAKFAQEYECVAVKFLADGG---EDVLVLEKARHPLL-------- 321
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
N P KGI+ VP+ + ++ R ++I+GPNTGGKT S+
Sbjct: 322 ---ERNLRP----------------KGIA--VVPMAMHMDARHRQIIISGPNTGGKTVSL 360
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGL +L+++AG+ +PA + LP F + ADIGD+QS+EQNLSTFS H++ I I
Sbjct: 361 KTLGLLALIAQAGVPVPA-DRAELPIFSSVFADIGDYQSIEQNLSTFSAHVTNIDLISHT 419
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+SLVL+DE+GS TDP EG ALA +I Y R L+V++TH+ L N
Sbjct: 420 AGADSLVLLDELGSATDPEEGAALAVAIADYFRQIGCLSVISTHHTSLKVYAANTEGVLN 479
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
AA F +TL+PTY + G G S +NIAK +G + II+ +
Sbjct: 480 AAVGFDEQTLQPTYELRVGVPGASAGINIAKRLGLNSTIIEAS----------------- 522
Query: 466 ELYQSLMEERRKLESQARTAAS----LHAEIM---DLYREIEDEAKDLDRRAAHLKAKET 518
+R+L +QA+ A LHAE+ D I+ ++L R L+A+
Sbjct: 523 ---------KRQLSNQAQDVAKFLDRLHAELRAASDERASIKRTEEELVRERKRLEAEGQ 573
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRD---ASADEI--NSLIKESESAIAAIVEAHRPDD 573
++ ++++ + ++D ++ DFE Q R+ A D L K++E IA + R
Sbjct: 574 KEQREKIRDLEKKLDGLLHDFEYQAREMVQAVQDRAAQQKLSKDAERRIAKMRREFREQF 633
Query: 574 DFSVSETNTSS------FTPQF------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 621
D SV T + P+ G++V ++S+G + V++ G D V+ G
Sbjct: 634 DNSVVAHATGADQGDPNARPELVKHVSEGDRVKLRSMG-REGKVIKRLG-ADLFEVEIGV 691
Query: 622 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 681
M+++V + +I + + + +ANP +A + S +S L
Sbjct: 692 MKMKVPREDIAEVTS---RPSANPV------------AAARAKGVSVSLVSDDLSSPIEL 736
Query: 682 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 739
++ G V++A+ +++ L A + ++HG G G+++ + L++HP V+ E
Sbjct: 737 NVIGQNVDDATREVERFLDKAFLAGMVQVRIVHGSGMGILRRALRTYLKHHPHVSNV-VE 795
Query: 740 SPMNYGCTVAYI 751
P G A +
Sbjct: 796 PPQQEGGNGATV 807
>gi|365841043|ref|ZP_09382199.1| MutS2 family protein [Anaeroglobus geminatus F0357]
gi|364559222|gb|EHM37212.1| MutS2 family protein [Anaeroglobus geminatus F0357]
Length = 787
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 333/678 (49%), Gaps = 91/678 (13%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
L+T R +R + +K +++ P GI ++S+SGAT ++EP VE +N E E
Sbjct: 186 LVTIRNNRSVIPVKQEYRHAFP-GIVHDMSASGATLYVEPLAIVEADNDLQAARLGEAKE 244
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVL---EIDLAFARAGFAQWMDGVCPILSSQSHVSF 203
I LTA +A + + LM+ L ++ AF +A A M P++S Q+ V
Sbjct: 245 IERIFRRLTALVAGN---YEGLMESTLLVGALEFAFTKARLALQMKATRPLIS-QNRV-- 298
Query: 204 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 263
I + +HPL+ P V N+ + G
Sbjct: 299 ---IKLYDARHPLI----------------PADKVVSNTIILGG---------------- 323
Query: 264 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 323
E R+++ITG NTGGKT SMKTLGL +LM +AGL+LP ++ LP F I ADIGD Q
Sbjct: 324 ---EYRILLITGSNTGGKTVSMKTLGLLALMHQAGLFLPVRDGSELPVFGDIFADIGDEQ 380
Query: 324 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 383
+ Q+LSTFS H+ ++V I++ + E LVL DEIGSGTDP+EG ALA ++++ L + L
Sbjct: 381 DIAQDLSTFSSHMKQLVYIIKHATAEDLVLADEIGSGTDPAEGGALAIAVMEELYRKGVL 440
Query: 384 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 443
A+VTTHY +L EN EF +TLRPTY++ GS G S+A +I++ +G
Sbjct: 441 AMVTTHYNELKNYAYNTAGIENGHVEFDTKTLRPTYKLRIGSAGSSHAFSISERLGMPAP 500
Query: 444 IIQRAQKLVERLRPERQQHRKSELYQSL--MEERRKLESQARTAASLHAEIMDLYREIED 501
++ +A++L R + + ++L + M+E + L + A H E DL RE E
Sbjct: 501 VLDKARELRSRAQDVDMEAVLTKLNNQVKQMDEEQALLEEKLAAVKRHEE--DLRREKE- 557
Query: 502 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
K RR ++A + + + N +++ + ++++ + Q + SA E I ++ A
Sbjct: 558 --KIASRRQDIVEAGRREATELKRNL-RLEAERIIRELKQQSAEDSARERAKAIDKARRA 614
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
I I PD ++ P + G+ V++ SLG L TV E+ G TV V+
Sbjct: 615 IQQI---SLPD----MAGPKRDPVDPKRLKTGQTVYINSLGG-LGTVEEIKGRRLTVSVR 666
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP----RV 674
M VRV +I AP L + ++++Q+ + +S+ P RV
Sbjct: 667 --GMTVRVGITDI-------------SAPYLEEVRQEKQAER--RAAAASSFRPVRTGRV 709
Query: 675 QTSKNSLDLRGMR-VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 733
T N + G V E S LD ALA S + +IHG G+G ++ +V + L P V
Sbjct: 710 ATELNIIGKTGSEAVPEVSRFLDQALAA--GFSPVRIIHGKGSGALRRQVHDYLDTLPFV 767
Query: 734 AKYEQESPMNYGCTVAYI 751
Y E N G V +
Sbjct: 768 RSYHLEDAQNGGAGVTLV 785
>gi|325849251|ref|ZP_08170687.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480195|gb|EGC83263.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 781
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 209/735 (28%), Positives = 338/735 (45%), Gaps = 126/735 (17%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 102
I D AS +L IR + E + + L +++ F DK +++ R R + +K +
Sbjct: 141 IADNASANLRSIRKRMGKKEEEIKNKLSFYISSSKFDDSLQDK-VVSIRDGRYVLPVKTN 199
Query: 103 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIA 159
K +L +GI + S SG T F+EP VE NN LSN +I E I L L+ +
Sbjct: 200 KKAVL-NGIIHDRSQSGNTLFIEPNAIVELNN---DLSNLQIEEGDEIRRILDRLSRFVQ 255
Query: 160 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 219
++EI + ID A+ + + P L+ + IN++ +HPLL G
Sbjct: 256 GFDQEILENQKLIQRIDFLQAKVKYFLAKEYTIPKLTDKK------IINLKNARHPLLKG 309
Query: 220 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 279
VPI++K+ ++ITGPNTG
Sbjct: 310 KV------------------------------------VPINVKIGDGYNTLIITGPNTG 333
Query: 280 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 339
GKT S+KT+GL SLM+++ Y+P + FD I DIGD QS+E +LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLISLMAQSAFYIPCDEDSLVNVFDDIFLDIGDTQSIEMSLSTFSASLTNI 393
Query: 340 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 399
V I E ++ SLVL+DE+GSGTDP+EG ALA SIL++L+++ + TTHY++L +
Sbjct: 394 VKITENITENSLVLLDEVGSGTDPTEGAALAISILEFLKNKNTMTFATTHYSELKYYALE 453
Query: 400 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 459
NA+ EF LETL PTY+++ G+ G SNA I+K +G +++I++ A+ ++
Sbjct: 454 KNGVMNASVEFDLETLSPTYKLIIGTPGKSNAFEISKRLGLNKEILKNAKSIL------- 506
Query: 460 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL------------- 506
++ + +++EE L+ + + EI D ++I DL
Sbjct: 507 --SEDNKNFNTILEE---LDQNKKEMEIKNQEIEDYKKKIRKARNDLLSLSEKIKKEEKD 561
Query: 507 -----DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 561
+ +A + + + Q+ L AK + D D S +EI + K S
Sbjct: 562 IIKKAEEKANKILDQANESSQEMLKIAKKSKNANTSDI-----DRSLNEIRNKYKSS--- 613
Query: 562 IAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 618
+ + D ++ S PQ G+ V ++ L +K A V+E P + + VQ
Sbjct: 614 --------KIEKDENILREKRSKNAPQNLKVGDLVMIEGLNEK-AQVIENPDEKGNIKVQ 664
Query: 619 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 678
G +++ +NI+ + K +N K+ +R + + P
Sbjct: 665 MGILKM---DSNIKNVTKLKDENKT-------KENTNR----IYKAKKAMHISP------ 704
Query: 679 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 736
+LDLRG R +EA D I A +IHG GTG ++ + + L+N+ + Y
Sbjct: 705 -TLDLRGQRYDEALRNFDKYIDDAMLSGLDQAKIIHGKGTGALRNGINDYLKNNKMIDSY 763
Query: 737 E--QESPMNYGCTVA 749
E YG T+
Sbjct: 764 RPGNEKEGGYGVTIV 778
>gi|225869204|ref|YP_002745152.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus]
gi|259511161|sp|C0MEM8.1|MUTS2_STRS7 RecName: Full=MutS2 protein
gi|225702480|emb|CAX00391.1| putative DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus]
Length = 778
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 210/718 (29%), Positives = 343/718 (47%), Gaps = 105/718 (14%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKY 105
AS +LE IR R + N + +++ I QA + + LI R R + +K ++++
Sbjct: 147 ASPELESIR----RQISNKEHASRQLLQDILKKQAAYLSESLIASRNGRSVLPVKNTYRH 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V N +L E E IL L+ ++ R +
Sbjct: 203 KVA-GVVHDMSASGSTVYIEPRALVSLNEELTQLQADERHEIGRILHELSEQLRPHSRSL 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +DL A+ + Q P++S D S+ + +HPL
Sbjct: 262 RNNAWLLGHLDLVRAKYLYMQAKQATVPVISD------DKSLQLLNARHPL--------- 306
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
++N PV D+ + V+VITGPNTGGKT +
Sbjct: 307 -------------IQN---------------PVANDLHFANDLAVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M+++GL + A R+ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 339 KTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQ 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+SL+L DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ADSDSLILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ F +L+PTYR + G G SNA +IA+ +G I++ AQ + H +
Sbjct: 459 ASMAFDNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTA------TDHDVN 512
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
+ + L E++ LES+ R ++ +E+E + +R L + + +EL
Sbjct: 513 RIIEQL--EQQTLESRKR---------LEHIKEVEQDNLKFNRAVKKLYNEFSHAKDKEL 561
Query: 526 NFAKVQIDTVVQDFENQLRDASADEINSLIKE-SESAIAAIVEA-HR-----PDDDFS-- 576
A ++ +V + A +D I S + E +E I+EA HR P+ S
Sbjct: 562 EKAALEAREIV-----DIALAESDSILSQLHEKAELKPHEIIEAKHRLKQLAPEQSLSQN 616
Query: 577 -VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 635
V + P+ G+ + V + G + + ++ D Q G +++ +K++ +
Sbjct: 617 KVLKQAKKWRAPRVGDDIIVTAYGQRGTLLAQL--KDKRWEAQVGLIKLTLKEDEFSLV- 673
Query: 636 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 695
++ A P R K + +G GPR + LDLRG R EEA +L
Sbjct: 674 -KLKEEAQQPKKRAVKVVKKAATGK----------GPRAR-----LDLRGKRYEEAMQEL 717
Query: 696 D--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGCTVA 749
D I A + S + +IHG+GTGV++E V + LR H + Y ++ GCT+A
Sbjct: 718 DAFIDQALLNNMSQVDIIHGIGTGVIREAVGKYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|170289322|ref|YP_001739560.1| MutS2 family protein [Thermotoga sp. RQ2]
gi|238688758|sp|B1LC69.1|MUTS2_THESQ RecName: Full=MutS2 protein
gi|170176825|gb|ACB09877.1| MutS2 family protein [Thermotoga sp. RQ2]
Length = 757
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 218/745 (29%), Positives = 336/745 (45%), Gaps = 101/745 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS L E + + E++ CI+ I DRAS L IR E+KR L S +K+
Sbjct: 106 YSRLKETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LASEIKR 160
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A + + + + R R +KAS + + GI ++SSSGAT F+EP V
Sbjct: 161 KADDFVRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFV 219
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 220 ELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNG 279
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V S I + +HPL+ +
Sbjct: 280 TV--------VKPSSRIRLVNARHPLIPKERV---------------------------- 303
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L
Sbjct: 304 -------VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELK 356
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA
Sbjct: 357 VFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALA 416
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+I++ L ++ VTTH + NA+ EF ETL PTYR+L G G S+
Sbjct: 417 VAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSH 476
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G D++II+ A R R R++ L +SL E+ LE + R
Sbjct: 477 AFQIAEKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKERE 531
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E M L + E++ K L R KE +++ + K ++D + + + S DE
Sbjct: 532 EYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDE 587
Query: 551 INSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +K +E + D + + E P G+ V ++ G + VVEV
Sbjct: 588 MREAVK--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV- 635
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
T LV +G +R++V P+ + + + S
Sbjct: 636 -KSGTALVDFGFLRLKV------PV-----------------SKLKKAKKEEKEESSAVS 671
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
Y P + + +D+RGM VEEA + I S ++IHG GTG + V EIL
Sbjct: 672 YRP--SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEIL 729
Query: 728 RNHPRVAKYEQESPMNYGCTVAYIK 752
R RV + +P G V ++
Sbjct: 730 RKDKRVVSFRFGTPSEGGTGVTVVE 754
>gi|402313005|ref|ZP_10831928.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
gi|400367581|gb|EJP20597.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
Length = 785
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 219/746 (29%), Positives = 348/746 (46%), Gaps = 114/746 (15%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
Y L E ++ + + +L++++ CI + I+ D AS +L IR R ++ ++S +
Sbjct: 114 YDVLEEYFRSLDEIKDLKKELSRCIISEE-IMADNASPELSHIR----RKIKQINSKMHT 168
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
I A + +IT+R C+ IK+ +K + G+ + SS+G+T F+EP +
Sbjct: 169 ELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKV-SGVVHDQSSTGSTVFIEPIAVI 227
Query: 131 EFNNMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 187
NN L+ E E IL SLL A+ +S RE ++ +D +A+A ++
Sbjct: 228 RMNNELKSLAMDEKKEIEKILENLSLLAAQYIESLREN---AKTLIFLDFVYAKANLSKK 284
Query: 188 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 247
M+ P +S+ + INI+ +HPLL +
Sbjct: 285 MNASEPKFNSKHY------INIKEGRHPLLDAKKV------------------------- 313
Query: 248 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 307
VPI+I + +++ITGPNTGGKT S+KT+GL +LM ++GL++PA
Sbjct: 314 ----------VPINISLGEHYDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGS 363
Query: 308 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 367
L F + ADIGD QS+EQ+LSTFSGH+ IV IL SL L DE+ +GTDP+EG
Sbjct: 364 ELSVFSDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANSLCLFDELCAGTDPTEGA 423
Query: 368 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 427
ALA SIL +L + TTHY++L + ENA+ EF + TL PTYRIL G G
Sbjct: 424 ALAISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVPG 483
Query: 428 DSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERR 476
SNA IA +G II A + L+ RL +RQ K +L S+ + +R
Sbjct: 484 KSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDRQTIEKDKL--SIQKYKR 541
Query: 477 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ----I 532
++ES R + +I +EAK+ R+ +AKET + N K+ +
Sbjct: 542 EIESLKRHYNKQEENLAARKEKILEEAKEAARKILE-EAKETADDTIK-NINKIASGAGL 599
Query: 533 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 592
+ +++ +LR++ IN K +E V+A +P + + G+
Sbjct: 600 GSALEEQRTRLRES----INKNTKATEIK-QNTVKAKKPKE-------------LKLGDS 641
Query: 593 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 652
VHV SL V +P VQ G +R +V +++ + P+ + +
Sbjct: 642 VHVISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALVE--------EPSTKPENK 692
Query: 653 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFV 710
R S S+ T +++ G V+EA +LD L A + +
Sbjct: 693 TRTRSSSMVKSA-----------TISTEINVIGKNVDEACSELDKYLDDALLAHLPGVRI 741
Query: 711 IHGMGTGVVKERVLEILRNHPRVAKY 736
IHG GTG +++ + L+ + Y
Sbjct: 742 IHGRGTGALQKGIHAYLKRQTFIKSY 767
>gi|340399647|ref|YP_004728672.1| DNA mismatch repair protein [Streptococcus salivarius CCHSS3]
gi|338743640|emb|CCB94150.1| DNA mismatch repair protein [Streptococcus salivarius CCHSS3]
Length = 810
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 201/727 (27%), Positives = 343/727 (47%), Gaps = 115/727 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 105
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 175 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 230
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 231 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHETARILHELSDQLRPQAAAI 289
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +D + + V P +S + ++ + ++HPLL+
Sbjct: 290 ANNAWILGHMDFIRGKYLYLHDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 337
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
PV D++ + + +VITGPNTGGKT +
Sbjct: 338 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 366
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 367 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNA 426
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 427 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 486
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 487 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 537
Query: 466 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 524
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 538 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 588
Query: 525 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 574
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 589 LEKAQKEIQEMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVD 640
Query: 575 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 628
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 641 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTGQAKNGNWEAQVGLIKMTLKA 698
Query: 629 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 688
+ + R A QQ ++ + ++ S GPR + LDLRG R
Sbjct: 699 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKTSGGPRAR-----LDLRGKRY 742
Query: 689 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 744
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 743 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 802
Query: 745 GCTVAYI 751
GCT+A +
Sbjct: 803 GCTIATL 809
>gi|282882263|ref|ZP_06290897.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
gi|281297884|gb|EFA90346.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
Length = 788
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 340/716 (47%), Gaps = 100/716 (13%)
Query: 44 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 101
+ D AS L IR RN+ L L++ +I Q+ + +IT R R + ++
Sbjct: 149 VADDASRKLLSIR----RNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRN 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+K + G+ ++S SG T ++EP V NN L E E IL L+ E+A+
Sbjct: 205 ENKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEV 263
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
I+ + EID FA+ + M P V+ + I+++ HPLL
Sbjct: 264 STSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL---- 313
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
N ++ V PI+I + + ++ITGPNTGGK
Sbjct: 314 -------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGK 342
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KTLG+ LM++ GL++PA ++ F+ + ADIGD QS+EQNLSTFS H++ IV+
Sbjct: 343 TVTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVE 402
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
ILE V +SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTHY L
Sbjct: 403 ILEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTE 462
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER------- 454
+NA+ EF + TL PTY++L G G SNA I+K +G +KII A+ L+ +
Sbjct: 463 GVKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEK 522
Query: 455 --LRPERQQHRKSELYQSLMEERRKLESQ-ARTAASLHAEIMDLYREIEDEAKDLDRRAA 511
E+ + + E + + LE Q AR L +I + +I EAKD RR
Sbjct: 523 VLASIEKDRTKTREFKELAKRHKSDLEKQNARLEIELK-KIENSKEKILKEAKDEARRIL 581
Query: 512 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 571
+ + E++ K +I + D +++++ NS+ K I +A +P
Sbjct: 582 LSTKENVDLILDEISSLKAEISS---DQARRIQESGDLLRNSIRKVDNDKKFVIEKAKKP 638
Query: 572 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 631
+D V G+QV S G+ ++TV+E+P + +Q G M+++V K ++
Sbjct: 639 IEDIKV------------GDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESL 684
Query: 632 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 691
I +P + K + S + K+ +DLRG E++
Sbjct: 685 TRI---------DPIDEVSKTKTRNIIKS------------KTMDVKSQIDLRGKNFEDS 723
Query: 692 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 745
+D L A + +IHG GTGV+++++ E L+ V Y ++P N G
Sbjct: 724 RDLVDKYLDDAFLAGLKTVNLIHGKGTGVLRKKLREYLKKQKNVKSY-SDAPYNEG 778
>gi|325979090|ref|YP_004288806.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325179018|emb|CBZ49062.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 778
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 208/723 (28%), Positives = 344/723 (47%), Gaps = 115/723 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 107
AS +L IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELNRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 108 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 167
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 168 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 227
+ +D A+ F Q + + P LS+ D ++ + +HPLL
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQARHPLLTN-------- 309
Query: 228 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 287
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 288 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 347
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 348 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 407
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 408 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 457
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 458 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 517
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKAQE 570
Query: 518 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 577
++ A + + ++++ L D ++ + + +I E++S + + P+ D S
Sbjct: 571 I------VDKAMAESEEILKN----LHDRASLKPHEVI-EAKSQLKKLA----PEVDLSK 615
Query: 578 SETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
++ + P+ G+ + V + G + + + G + Q G +++ +K++
Sbjct: 616 NKVLKKAKKIRAPRVGDDIVVTAYGQRGTLISQ--GKNGKWEAQVGLIKMTLKEDEF--- 670
Query: 635 PNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 690
L K QE+ Q + S GPR + LDLRG R EE
Sbjct: 671 -------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKRYEE 712
Query: 691 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 746
A +LD I A + + + +IHG+GTGV++E V + LR H + Y ++ GC
Sbjct: 713 AMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGC 772
Query: 747 TVA 749
T+A
Sbjct: 773 TIA 775
>gi|312866495|ref|ZP_07726713.1| MutS2 family protein [Streptococcus downei F0415]
gi|311098189|gb|EFQ56415.1| MutS2 family protein [Streptococcus downei F0415]
Length = 797
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 196/683 (28%), Positives = 326/683 (47%), Gaps = 109/683 (15%)
Query: 87 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 146
LI R R + ++ +++ + G+ ++S+SG T ++EP+ V+ N + E E
Sbjct: 201 LIASRNGRSVLPVRNTYRNKIA-GVVHDISASGTTVYIEPRAVVQLNEDITQARADERHE 259
Query: 147 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 206
IL L+ + + I+ + +D+ A+ + Q P LS D +
Sbjct: 260 LHRILRELSDLLRPHTQTIRNNAWLIGHLDVVRAKYLYMQEYQASLPSLSE------DKT 313
Query: 207 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 266
+N+ ++HPLL+ NP+ +D+ SK +S
Sbjct: 314 VNLLNVRHPLLI--------------NPIANDLH--------FSKNLS------------ 339
Query: 267 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 326
V+VITGPNTGGKT +KTLGL+ +M+++GL + A ++ F I ADIGD QS+E
Sbjct: 340 ---VIVITGPNTGGKTIMLKTLGLSQIMAQSGLPILADPGSKVAIFKEIFADIGDEQSIE 396
Query: 327 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 386
Q+LSTFS H+ IVDIL+ +SLVL+DE+G+GTDP EG +LA +IL +LR +
Sbjct: 397 QSLSTFSSHMGHIVDILKRADEQSLVLLDELGAGTDPQEGASLAMAILGHLRLSDIKTMA 456
Query: 387 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 446
TTHY +L + +NA+ F +++LRPTY + G G SNA IA+ +G + I+
Sbjct: 457 TTHYPELKAYGIETAHVQNASMAFDIDSLRPTYHFMQGVPGRSNAFEIARRLGLAKVIVD 516
Query: 447 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 506
A+++ R + + + + L E + ES+ R +D R++E E
Sbjct: 517 DAEQMTNR------ESDTNVIIEQL--EAQTAESRKR---------LDHIRDVEQENLKF 559
Query: 507 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE----SESAI 562
+R L + + +EL A+ +I QL + DE N ++K S+
Sbjct: 560 NRAVKKLYNEFSHAYDKELAKAQAEI--------RQLVSQATDESNQILKHLKDRSQLKP 611
Query: 563 AAIVEAH------RPDDDFSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPG 610
++EA P +D S ++ ++ P+ G+ V V + G + + ++
Sbjct: 612 HEVIEAKGKLKKLAPSEDLSKNKVLRKAKKQKAARAPKVGDDVIVIAYGQRGTLINQLK- 670
Query: 611 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 670
D Q G +++ +K+ + + ++ Q+ R+ AS
Sbjct: 671 -DGRWEAQVGLIKMTLKEAEFNLVKH-------------QESQKARKKKQVNVVKRSAST 716
Query: 671 GPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR 728
GP + LDLRG R EEA +LD I A + + + +IHG+GTGV++E V + LR
Sbjct: 717 GPHAR-----LDLRGKRYEEAMQELDDFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLR 771
Query: 729 NHPRVAK--YEQESPMNYGCTVA 749
+H V Y ++ GCT+A
Sbjct: 772 SHRHVKSFGYAPQNAGGSGCTIA 794
>gi|256844561|ref|ZP_05550047.1| mismatch repair protein [Lactobacillus crispatus 125-2-CHN]
gi|293381590|ref|ZP_06627577.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus crispatus 214-1]
gi|256613639|gb|EEU18842.1| mismatch repair protein [Lactobacillus crispatus 125-2-CHN]
gi|290921860|gb|EFD98875.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus crispatus 214-1]
Length = 785
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 213/736 (28%), Positives = 346/736 (47%), Gaps = 123/736 (16%)
Query: 44 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 99
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 100 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 159
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLS-NLA 258
Query: 160 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 218
+ E + + + +D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTGLDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 219 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 278
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 279 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 338
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 339 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 398
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 399 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 458
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 459 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 518
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 519 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 570
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAK-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 571 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 620
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 621 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 680
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 681 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 736
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 737 EQESPMNYGCTVAYIK 752
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|270293330|ref|ZP_06199539.1| DNA mismatch repair protein MutS [Streptococcus sp. M143]
gi|270278179|gb|EFA24027.1| DNA mismatch repair protein MutS [Streptococcus sp. M143]
Length = 778
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 222/721 (30%), Positives = 346/721 (47%), Gaps = 111/721 (15%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKY 105
ASE+L IR R + + +S ++ V + + A + + +I R R + +K +++
Sbjct: 147 ASEELARIR----RKIHDSESQVRDVLQDLLKQKAQMLTEGIIASRNGRQVLPVKNTYRN 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG T ++EP+ V+ + L E E IL L+ + EI
Sbjct: 203 KIA-GVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMIRILQELSERVRPHAAEI 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ +DL A+ F Q V P LS + I + ++HPL
Sbjct: 262 ANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE------NQEIQLLHVRHPL--------- 306
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
V+N+ VP D+ E V+VITGPNTGGKT +
Sbjct: 307 -------------VKNA---------------VPNDVHFGKELTVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGL LM+++GL + A R+ F+ I ADIGD QS+EQ+LSTFS H++ IVDIL
Sbjct: 339 KTLGLTQLMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGK 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
V++ SL+L+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + +N
Sbjct: 399 VNQHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 465
A+ EF +LRPTYR + G G SNA IAK +G I+ A + V Q + +
Sbjct: 459 ASMEFDTASLRPTYRFMQGVPGRSNAFEIAKRLGLSDVIVGDASQQV------NQDNDVN 512
Query: 466 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 525
+ + L E + LES+ R +D RE+E E ++R L + ++ + EL
Sbjct: 513 RIIEQL--EDQTLESRKR---------LDNIREVEQENLKMNRALKKLYNELNREKETEL 561
Query: 526 NFAKVQIDTVVQDFENQLRDASADEI-NSLIKESESAIAAIVEAH------RPDD-DFS- 576
N A+ Q +V +L + +D+I +L +S+ I+EA P+ D S
Sbjct: 562 NKAREQAAEIV-----ELALSESDQILKNLHSKSQLKPHEIIEAKAELKKLAPEKVDLSK 616
Query: 577 --VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 634
V + TP+ G+ + V S G + ++ D Q G +++ ++ +
Sbjct: 617 NKVLQKAKKKRTPKVGDDIVVLSYGQRGTLTNQLK--DGRWEAQVGLIKMTLEDKEFDLV 674
Query: 635 PNSKRKNAANPAPRLRKQQE--DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 692
A AP +KQ R SG GP+ + LDLRG R EEA
Sbjct: 675 ------QAQQEAPVKKKQVNIVKRASGR----------GPQAR-----LDLRGKRYEEAM 713
Query: 693 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 750
++LD I A + + + +IHG+GTGV++E V + L+ + V + +P N G + A
Sbjct: 714 NELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGY-APQNAGGSGAT 772
Query: 751 I 751
I
Sbjct: 773 I 773
>gi|334188381|ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
gi|332009066|gb|AED96449.1| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
Length = 796
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 210/674 (31%), Positives = 332/674 (49%), Gaps = 93/674 (13%)
Query: 7 GNIFHRYSPLLELLK----NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN 62
G+ + R+ PL EL+ N +F+ +E+ I K D AS L R R+R
Sbjct: 165 GDWYKRFMPLSELIVHPVINRSFVKLVEQVIDPDGTIK-----DSASSAL---RQSRER- 215
Query: 63 MENLDSLLKKVAAQIFQAGGIDKPLITKRR--SRMCVGIKASHKYLLPDGIALNVSSSGA 120
++ L+ L+++ I ++ D+ ++ R C I+ S L L S SG
Sbjct: 216 VQTLERKLQQLLDAIIRSQKDDESVMLAAEIDGRWC--IQMSSNQLTSVNGLLLSSGSGG 273
Query: 121 TYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 179
EP AV N+ +++ + + +A+ E ILS+LT ++ +I+ ++ +++D+
Sbjct: 274 GTAAEPIAAVSMND-DLQSARASVAKAEAEILSMLTEKMQDGLCQIEVVLSYSIQLDVIN 332
Query: 180 ARAGFAQWMDGVCP--ILSSQSHVSFDSS------INIEGIK---------------HPL 216
ARA +++ G P L + V S+ IN+ K HPL
Sbjct: 333 ARATYSRAYGGAHPDIYLPPEDEVESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPL 392
Query: 217 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 276
LL + + K T ++ G P+P D ++ TRV+VITGP
Sbjct: 393 LLYQHKKGIRKTRETVKFHK--------TADTVLSGAP--PIPADFQISKGTRVLVITGP 442
Query: 277 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 336
NTGGKT +K++GLA++M+K+GLY+ A R+PWFD I ADIGD QSL Q+LSTFSGH+
Sbjct: 443 NTGGKTICLKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHL 502
Query: 337 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSC 395
+I +IL + SLVL+DE+G+GT+P EG AL +IL+ + L + TTH+ +L
Sbjct: 503 KQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKT 562
Query: 396 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 455
LK ++ FENA EF L+PTY+ILWG G SNA+NIA +G II+ A++L
Sbjct: 563 LKYSNSAFENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSA 622
Query: 456 RPERQQ-----HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 510
E + R + YQ L+ E R R + LH ++ + I D +
Sbjct: 623 SAEINEVILDMERYKQEYQRLLNESR---VYIRLSRELHENLLTAQKNINDHS------- 672
Query: 511 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH- 569
KE ++++QEL A + ++ Q R ++ K S+S +A ++
Sbjct: 673 ----TKERRKMRQELTQAGSMTRSTLRRTLQQFRSSAG-------KSSQSKVATQLQTKV 721
Query: 570 --RPDDDFSVSETNT----------SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 617
D+D + ++ + P+ G V V SLG K ATV++V +LV
Sbjct: 722 KTTKDEDNGIRSSSVVERRPLPEAAAQKVPEVGSSVFVSSLGKK-ATVLKVEHSKKEILV 780
Query: 618 QYGKMRVRVKKNNI 631
Q G M+++VK ++
Sbjct: 781 QVGIMKMKVKLTDV 794
>gi|281412927|ref|YP_003347006.1| MutS2 family protein [Thermotoga naphthophila RKU-10]
gi|281374030|gb|ADA67592.1| MutS2 family protein [Thermotoga naphthophila RKU-10]
Length = 757
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 218/745 (29%), Positives = 336/745 (45%), Gaps = 101/745 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK 72
YS L E + + E++ CI+ I DRAS L IR E+KR L S +K+
Sbjct: 106 YSRLKETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LASEIKR 160
Query: 73 VAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 130
A + + + + R R +KAS + + GI ++SSSGAT F+EP V
Sbjct: 161 KADDFVRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFV 219
Query: 131 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 190
E NN L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 220 ELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNG 279
Query: 191 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 250
V S I + +HPL+ +
Sbjct: 280 TV--------VKPSSRIRLVNARHPLIPKERV---------------------------- 303
Query: 251 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 310
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L
Sbjct: 304 -------VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELK 356
Query: 311 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 370
F I+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA
Sbjct: 357 VFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALA 416
Query: 371 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 430
+I++ L ++ VTTH + NA+ EF ETL PTYR+L G G S+
Sbjct: 417 IAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSH 476
Query: 431 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 490
A IA+ +G D++II+ A R R R++ L +SL E+ LE + R
Sbjct: 477 AFQIAEKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKERE 531
Query: 491 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 550
E M L + E++ K L R KE +++ + K ++D + + + S DE
Sbjct: 532 EYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDE 587
Query: 551 INSLIKESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 609
+ +K +E + D + + E P G+ V ++ G + VVEV
Sbjct: 588 MREAVK--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV- 635
Query: 610 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 669
T LV +G +R++V P+ + + + S
Sbjct: 636 -KSGTALVDFGFLRLKV------PV-----------------SKLKKAKKEEKEESSAVS 671
Query: 670 YGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEIL 727
Y P + + +D+RGM VEEA + I S ++IHG GTG + V EIL
Sbjct: 672 YRP--SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEIL 729
Query: 728 RNHPRVAKYEQESPMNYGCTVAYIK 752
R RV + +P G V ++
Sbjct: 730 RKDKRVVSFRFGTPSEGGTGVTVVE 754
>gi|419718852|ref|ZP_14246154.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
gi|383304971|gb|EIC96354.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
Length = 785
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 215/737 (29%), Positives = 342/737 (46%), Gaps = 96/737 (13%)
Query: 13 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN------L 66
Y L E + + L++++ CI + I+ D AS +L IR RK N N L
Sbjct: 114 YDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSHIR--RKINQINSKMHTEL 170
Query: 67 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 126
+++L + A +IT+R C+ IK+ +K + G+ + SS+G+T F+EP
Sbjct: 171 NNILNAHREYLMDA------VITQRDGAYCLPIKSEYKNKVA-GVVHDQSSTGSTVFIEP 223
Query: 127 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 186
+ NN LS E E IL L+ A ++ ++ +D +A+A ++
Sbjct: 224 LAIIRMNNELKSLSMDEKKEIEKILESLSLLAADYINILENNSKNLIFLDFVYAKANLSK 283
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
M+G P +S+ + INI+ +HPLL +
Sbjct: 284 KMNGSEPKFNSKHY------INIKEGRHPLLDTKKV------------------------ 313
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VPI+I + +++ITGPNTGGKT S+KT+GL ++M ++GL++PA
Sbjct: 314 -----------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGLFTIMGQSGLHIPAFEG 362
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
L FD + ADIGD QS+EQ+LSTFSGH+ IV IL SL L DE+ +GTDP+EG
Sbjct: 363 SELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAGSLCLFDELCAGTDPTEG 422
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
ALA SIL +L + TTHY++L + ENA+ EF + TL PTYRIL G
Sbjct: 423 AALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVP 482
Query: 427 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 486
G SNA IA +G II A +E+ + + +L L +R+ +E +
Sbjct: 483 GKSNAFAIAGKLGLPDYIIFEAGTHLEKDAKDFE-----DLLTKLENDRQIIEKDKLSIQ 537
Query: 487 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 546
EI L R + + ++L + + + + ++ L AKV D +++ N++
Sbjct: 538 KYKKEIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEAKVTADDTIKNI-NKIASG 596
Query: 547 SA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 601
+ +E + ++ES + VE +P + + G+ VHV SL
Sbjct: 597 AGLGSALEEQRTRLRESINKNTKSVEVKKP------TNKLKKPKELKLGDSVHVISLNLD 650
Query: 602 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 661
V +P + VQ G +R +V ++I I +K P + R S
Sbjct: 651 -GIVSSLPNQSGNLFVQMGILRSQVNISDIALIDEPDKK----PENKTR---------SR 696
Query: 662 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 719
GSS +++ T ++L G V+EA +LD L A + +IHG GTG +
Sbjct: 697 GSSMVKSA------TISTEINLIGKNVDEACSELDKYLDDALLAHLPGVRIIHGRGTGAL 750
Query: 720 KERVLEILRNHPRVAKY 736
++ + L+ + Y
Sbjct: 751 QKGIHAYLKRQSFIKSY 767
>gi|195977479|ref|YP_002122723.1| recombination inhibitory protein MutS2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689796|sp|B4U143.1|MUTS2_STREM RecName: Full=MutS2 protein
gi|195974184|gb|ACG61710.1| recombination inhibitory protein MutS2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 778
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 212/726 (29%), Positives = 342/726 (47%), Gaps = 121/726 (16%)
Query: 48 ASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKY 105
AS +LE IR R + N + +++ I QA + + LI R R + +K ++++
Sbjct: 147 ASPELESIR----RQISNKEHASRQLLQDILKKQAAYLSESLIASRNGRSVLPVKNTYRH 202
Query: 106 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 165
+ G+ ++S+SG+T ++EP+ V N +L E E IL L+ ++ R +
Sbjct: 203 KVA-GVVHDMSASGSTVYIEPRALVSLNEELTQLQTDERHEIGRILHELSEQLRPHSRSL 261
Query: 166 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 225
+ + +DL A+ + Q P++S D S+ + +HPL
Sbjct: 262 RNNAWLLGHLDLVRAKYLYMQAKQAAVPVISD------DKSLQLLNARHPL--------- 306
Query: 226 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 285
++N PV D+ + V+VITGPNTGGKT +
Sbjct: 307 -------------IQN---------------PVANDLHFANDLAVIVITGPNTGGKTIML 338
Query: 286 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 345
KTLGLA +M+++GL + A R+ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILKQ 398
Query: 346 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 405
+SL+L DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ADSDSLILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVEN 458
Query: 406 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL------VERLRPER 459
A+ F +L+PTYR + G G SNA +IA+ +G I++ AQ + V R+
Sbjct: 459 ASMAFDNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATNHDVNRI---- 514
Query: 460 QQHRKSELYQSLMEERRKLESQARTAA---SLHAEIMDLYREIEDEAKDLDRRAAHLKAK 516
+L Q +E R++LE + + LY E AKD + A L+A+
Sbjct: 515 ----IEQLEQQTLESRKRLEHIKEVEQDNLKFNRAVKKLYNEF-SHAKDKELEKAALEAR 569
Query: 517 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA-HR----- 570
E +D + + E+ L + L +++E I+EA HR
Sbjct: 570 EI-------------VDMALAESESIL--------SQLHEKAELKPHEIIEAKHRLKQLV 608
Query: 571 PDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 627
P+ S V + P+ G+ + V + G + + ++ D Q G +++ +K
Sbjct: 609 PEQSLSQNKVLKKAKKWRAPRVGDDIIVTAYGQRGTLLAQL--KDKRWEAQVGLIKLTLK 666
Query: 628 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 687
++ + ++ A P R K + +G GPR + LDLRG R
Sbjct: 667 EDEFSLV--KLKEEAQQPKKRAVKVVKKAATGK----------GPRAR-----LDLRGKR 709
Query: 688 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMN 743
EEA +LD I A + S + +IHG+GTGV++E V + LR H + Y ++
Sbjct: 710 YEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVGKYLRRNKHVKSFGYAPQNAGG 769
Query: 744 YGCTVA 749
GCT+A
Sbjct: 770 SGCTIA 775
>gi|392375798|ref|YP_003207631.1| MutS2 protein [Candidatus Methylomirabilis oxyfera]
gi|258593491|emb|CBE69830.1| putative MutS2 protein [Candidatus Methylomirabilis oxyfera]
Length = 804
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 218/707 (30%), Positives = 340/707 (48%), Gaps = 90/707 (12%)
Query: 46 DRASEDLELIRA--ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 101
D AS+ L +R + RN+ L SLL Q + I + L+T R R + +K
Sbjct: 149 DTASQRLNQLRIGLHQLRNLIHARLQSLLMTPTLQPY----ITESLVTLRNDRYVIPVKP 204
Query: 102 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 161
+++ +L G+ + S SG T F+EP+ VE NN L SE E +L+ LTA + +
Sbjct: 205 NYRTVL-KGVVQDRSISGVTIFLEPQEVVELNNQLRLLQRSEEEEIRRVLAALTATLRAT 263
Query: 162 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 221
+ M E+D+ A A FA + P+ ++ + + HPLLL
Sbjct: 264 ADAVLSTMLLAAELDVRCAAARFADTLH-CAPVALKEA-----GPLLLREAGHPLLL--- 314
Query: 222 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 281
+ AA + +PID+++ ++ITGPNTGGK
Sbjct: 315 -ERIDAAGIHRT------------------------IPIDLRLGDSFDALLITGPNTGGK 349
Query: 282 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 341
T ++KT GL SLM++AGL+LPA +P+F +LADIGD QS+EQ+LSTFS HI +I
Sbjct: 350 TVALKTAGLLSLMAQAGLHLPASPDSEVPFFSGVLADIGDEQSIEQSLSTFSSHIGQIRR 409
Query: 342 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 401
IL+ +LVL+DE+G+GTDP EG L +IL L +R L V TTH +
Sbjct: 410 ILDAAQPGTLVLLDELGAGTDPVEGACLGIAILDALLERGALVVATTHLDAIKAYAYSHP 469
Query: 402 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR-PERQ 460
R EN EF L+TLRP Y++L G +G S+ L IA +G ++IQ+A++L+ R P R
Sbjct: 470 RIENGCVEFDLDTLRPLYKLLIGLSGRSHGLAIASRVGLPLRVIQQAERLLGEGRDPLRL 529
Query: 461 QHRKSELYQS-LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 519
+ E Q+ L ER L + A AE EA+ L R A Q
Sbjct: 530 LLDRLEDEQARLTIEREVLAREVAETARARAEAETRRDAARVEAEQLYRLAC-------Q 582
Query: 520 QVQQELNFAKVQIDTVVQDFE-NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 578
Q + + A+++++ ++++F Q R SA ++ + + E A + + D +
Sbjct: 583 QTEGAVADARIEVERLLREFRLAQSRGRSAQQVRRRLIDVERQTKARL-SDVTGSDHAAC 641
Query: 579 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY--GKMRVRVKKNNIRPIPN 636
+ +S + G++V ++ LG + TV+ P TV ++ GKMRV ++ I+ P
Sbjct: 642 SVDAASI--RDGQEVVIRGLGQR-GTVIGKPSSSGTVEIRLPIGKMRVPLEAVIIQGDP- 697
Query: 637 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 696
+ + P RL + +D K L+L G EA+ +LD
Sbjct: 698 -PQGETSRPI-RLARTTDD---------------------VKGELNLIGCDAAEAARRLD 734
Query: 697 --IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP-----RVAKY 736
+ A + +IHG G+G++++ V +L +HP RVA Y
Sbjct: 735 QYVGDAFIVGLPTVRIIHGKGSGILRKTVTGLLVDHPLVESFRVADY 781
>gi|260495808|ref|ZP_05815929.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
gi|260196655|gb|EEW94181.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
Length = 778
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 210/777 (27%), Positives = 374/777 (48%), Gaps = 146/777 (18%)
Query: 12 RYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 71
+Y L E + N L +E+ I I+ + I D AS DL IR +K L+ +K
Sbjct: 112 KYKQLRETIGNIPNLRLIEDVINKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIK 166
Query: 72 KVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 127
+ ++F+ + + +IT+R RM +K K L+ GI + SSSG T F+EP
Sbjct: 167 RKFEELFEEPSLSNAFQERIITERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 128 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQ 186
V NN L E E IL L AE+ ++ ++ I + ++V+ +D+ A++ +A
Sbjct: 226 SIVSLNNKMRELETKEKEEIRKIL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN 284
Query: 187 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 246
P +S++ +S + + +HP + D E
Sbjct: 285 ENRCEIPTVSNREILSLEKA------RHPFI--------------------DKEKV---- 314
Query: 247 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 306
VP+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA +
Sbjct: 315 -----------VPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEN 363
Query: 307 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 366
++ +F+ + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 364 SKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEG 423
Query: 367 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 426
A A +++ YL ++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G
Sbjct: 424 AAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIP 483
Query: 427 GDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEE 474
G+SNAL IA+ +G II +A +K++E ++ + Q+ E + L EE
Sbjct: 484 GESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEE 543
Query: 475 RRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQ 519
R L+ + +L E I Y E E ++ +A+ L K + +
Sbjct: 544 AR-LDRERAKQETLIIEKQKNEIIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAK 602
Query: 520 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 579
Q+Q+ LN +++ ++E ++ +V+ + +F V
Sbjct: 603 QIQKNLNM-----------------------LSTALREEKNKTVEVVKKIKTKINFKV-- 637
Query: 580 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 639
G++V VKS+ ++ A ++++ ++ +VQ G +++ V
Sbjct: 638 ----------GDRVFVKSI-NQFANILKINTSKESAMVQAGILKLEV------------- 673
Query: 640 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 699
P ++ +E ++ +++++ ++ +DLRG V+EA ++L+ L
Sbjct: 674 -----PFDEIKVVEEKKEKVYNMNTHKKTPV-------RSEIDLRGKMVDEAVYELETYL 721
Query: 700 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 752
A + +++IHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 722 DRATLNGYTEVYIIHGKGTGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,711,794,964
Number of Sequences: 23463169
Number of extensions: 431374519
Number of successful extensions: 1776715
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8764
Number of HSP's successfully gapped in prelim test: 3285
Number of HSP's that attempted gapping in prelim test: 1744449
Number of HSP's gapped (non-prelim): 20050
length of query: 752
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 601
effective length of database: 8,816,256,848
effective search space: 5298570365648
effective search space used: 5298570365648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)