Citrus Sinensis ID: 004463

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750--

MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK

cccccHcccccccccHHHHHHcccccHHHHHHHcccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccEEEEEEcccccccccccEEEECcccccEEEEccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHcccccEEEEEEEcccccccccEEEEcccccccHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccEEEEEEECccccEEEEEEccEEEEECcccEEEcccccccccccccccccccccccccccccccccccccccccccccccEECccccHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHcccccccccccccccccEEEEEEc

*LEQ**GNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR************************SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV**************LY***M********************MDLY***EDEAKDLDR***H***********ELNFAKVQIDTVVQDFE*************************************************GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI**********************************************KNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK

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MLEQECGNIFHRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIxxxxxxxxxxxxxxxxxxxxxxxxxxxxVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSExxxxxxxxxxxxxxxxxxxxxxxxxxxxVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
MutS2 protein		probable	Q8EPI1
MutS2 protein		probable	A5D0W6
MutS2 protein		probable	Q8XJ80

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WB9, chain A
Confidence level:very confident
Coverage over the Query: 12-222,254-320,332-454
View the alignment between query and template
View the model in PyMOL

Template: 3QD7, chain X
Confidence level:confident
Coverage over the Query: 677-752
View the alignment between query and template
View the model in PyMOL

Template: 3THW, chain B
Confidence level:probable
Coverage over the Query: 269-397,414-448,461-489,502-510
View the alignment between query and template
View the model in PyMOL

Template: 3E1S, chain A
Confidence level:probable
Coverage over the Query: 586-632
View the alignment between query and template
View the model in PyMOL

Template: 2DFS, chain A
Confidence level:probable
Coverage over the Query: 469-574
View the alignment between query and template
View the model in PyMOL