BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004470
(751 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/707 (61%), Positives = 552/707 (78%), Gaps = 1/707 (0%)
Query: 38 LSQRSFALGS-TNTRPFPDYSPKRPTIRDSEIVHQISTAIKLRCSEPLRHTLKPFESKFR 96
L R + + T+TRPFPDYSPK+ ++RD+E VHQI+ IKLR +EPLR +LKP+E KF+
Sbjct: 27 LQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFK 86
Query: 97 SDHLIWVLMDIRSDYRLVLDFFDWACLRREPILEARCIVVQISVAAKDLKTAHGLIHDFW 156
+DHLIWVLM I+ DYRLVLDFFDWA RR+ LE+ CIV+ ++VA+KDLK A LI FW
Sbjct: 87 TDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFW 146
Query: 157 AKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGL 216
+P L+ + +F F + L+YTYKDWGSDP VFD+FFQVLV+ L EAR++FEK+LNYGL
Sbjct: 147 ERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGL 206
Query: 217 VISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAH 276
V+SVDSCN++L+RLS C + F EFPE+G+CWN ASYNI+IH +C+ G+IKEAH
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 277 LLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLL 336
LLL MEL+G +PDV+S+ST++NGYC GEL +V KLIE M+ KGLKPN Y Y S++ LL
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 337 CKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDL 396
C+ K+ EAE EM+ QGI+PD V+YTTLIDGFCK G++ AA + F EM +I PD+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 397 LTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNN 456
LTYTAII GFC G MVEA KLFHEM +GLEPD + +T LI+GYCKAG MK AF +HN+
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 457 MVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGN 516
M+ +PNVVTYT L DGLCK G+L++ANELLHEM + GLQ NI+TYNSIVNGLCK+GN
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 517 ILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNV 576
I +AVKL+ + E AG + DT TYTT+MDAYCKSGEM KA E+L++ML KGLQP++VTFNV
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 577 LMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQG 636
LMNGFC+ GM+EDGEKLL WML KG+ PNA T+N L+KQ+C+RN+++ IYK MC++G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 637 ITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEAR 696
+ PDG TY L++GHCKARNMKEAWFL +EM KGF+++ S+Y+ LIKGFLKRKK+LEAR
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 697 ELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECYLV 743
E+F++MRR GL AD+EI+ FF D ++ + ++ D IE YLV
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 213/700 (30%), Positives = 348/700 (49%), Gaps = 56/700 (8%)
Query: 86 HTLKPFESKFRSDHLIWVLMDIRSDYRLVLDFFDWACLRREPILEARCIVVQISVAAKDL 145
+ L + F + +L+ ++D L+L F +WA + L +CI + I K
Sbjct: 37 YQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLY 96
Query: 146 KTAHGLIHDFWAKPNLD--ASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
KTA L D AK D AS+ F E TY S VFD+ + +++
Sbjct: 97 KTAQILAEDVAAKTLDDEYASLVFKSLQE----TYDLCYSTSSVFDLVVKSYSRLSLIDK 152
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMI 263
A + +G + V S N L + + F E E + N +YNI+I
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 264 HCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLK 323
C G I A L +ME +GC P+VV+++T+I+GYC L ++ KL+ M +KGL+
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
PN +YN V+ LC+ ++ E +L EM +G D V Y TLI G+CK GN A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 384 FDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCK 443
EM + P ++TYT++I C G M A + +M RGL P+E YT L+DG+ +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 444 AGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYT 503
G M +A+ + M +P+VVTY AL +G C +G++E A +L +M KGL ++ +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 504 YNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDML 563
Y+++++G C++ ++ +A+++ +M G PDT TY++++ +C+ +A +L +ML
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 564 DKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK--------- 614
GL P T+ L+N +CM G +E +L M+EKG+ P+ TY+ LI
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 615 -------------------------QHCLRNDMRTTAKIYKGMCAQGI------------ 637
++C + ++ + KG C +G+
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 638 ----TPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYL 693
PDG YNI++ GHC+A ++++A+ L+KEMV+ GF L T + AL+K K K
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 694 EARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
E + + R +++ E V+IN EGN ++ L++
Sbjct: 693 ELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDV 732
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 233/418 (55%), Gaps = 5/418 (1%)
Query: 327 YTYNSVVRLLCKT----SKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMG-NVAAAY 381
Y+ +SV L+ K+ S + +A +I+ G +P + Y ++D + N++ A
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGY 441
+F EM + P++ TY +I GFC G + A LF +M +G P+ + Y LIDGY
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 442 CKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
CK + F L +M L PN+++Y + +GLC+ G ++ + +L EM R+G L+
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
TYN+++ G CK GN QA+ + +M G P TYT+++ + CK+G M +A E L
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
M +GL P+ T+ L++GF G + + ++L+ M + G P+ TYN LI HC+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
M + + M +G++PD +Y+ +L G C++ ++ EA + +EMV+KG T +Y++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
LI+GF ++++ EA +L+EEM R GL D Y ++ EG+ E L+L + +E
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 15/406 (3%)
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
G+ + +Y +IH +C+ G + A L QM +RG P+ +++T+++G+ G +
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
+++ EM G P+ TYN+++ C T K+ +A +L +M +G+ PD V Y+T++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
FC+ +V A R+ EM I PD +TY+++I GFC + EA L+ EML GL PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELL- 489
E YTALI+ YC G ++KA LHN MV + P+VVTY+ L +GL K A LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 490 --------------HEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPD 535
H + + + S++ G C G + +A ++ E M PD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 536 TFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLK 595
Y ++ +C++G++ KA+ L ++M+ G VT L+ G + + ++
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 596 WMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDG 641
+L A L++ + +M + M G P+G
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 306/585 (52%), Gaps = 38/585 (6%)
Query: 163 ASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDS 222
+ ++ V L T+ + GS+ VFD+ + V+ARKL EA + F L + G +S+D+
Sbjct: 143 SGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA 202
Query: 223 CNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQM 282
CN + L + + + E G+ N + NIM++ LC+ GK+++ L Q+
Sbjct: 203 CNALIGSLVRI-GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 283 ELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKV 342
+ +G PD+V+++T+I+ Y G ++ +L+ M KG P YTYN+V+ LCK K
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 343 VEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAI 402
A+ + EM+ G+ PD+ Y +L+ CK G+V ++F +MR +++PDL+ ++++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 403 ICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRL 462
+ F +G + +A F+ + GL PD ++YT LI GYC+ G + A +L N M+
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 463 TPNVVTY-----------------------------------TALADGLCKSGELETANE 487
+VVTY T L DG CK G L+ A E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 488 LLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYC 547
L +M K ++L++ TYN++++G K G+I A ++ DM P +Y+ +++A C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 548 KSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAA 607
G + +A + +M+ K ++P+V+ N ++ G+C SG DGE L+ M+ +G P+
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 608 TYNPLIKQHCLRNDMRTTAKIYKGMCAQ--GITPDGNTYNILLQGHCKARNMKEAWFLHK 665
+YN LI +M + K M + G+ PD TYN +L G C+ MKEA + +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 666 EMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
+M+++G N S+Y +I GF+ + EA + +EM + G D
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 54/293 (18%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLL-------NYGLVISVDS-CNLFLSRLSNTCD 235
D ++ L + + L EA KLF ++ +Y L I +D C L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL---------G 494
Query: 236 GLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFS 295
L+ ++ F + E I + +YN ++ + G I A + M + P +S+S
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 296 TIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQ 355
++N C G L ++ +EM K +KP NS+++ C++ + E+ L +M+++
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 356 GIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLN--IIPDLLTYTAIICGFCLTGKMV 413
G VPD + Y TLI GF + N++ A+ L +M ++PD+ TY +I+ GFC +M
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 414 EAE-----------------------------------KLFHEMLGRGLEPDE 431
EAE ++ EML RG PD+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 17/294 (5%)
Query: 467 VTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGN---------- 516
++ +A+ L +SG L A L M R+ + NS+ + G+
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 517 -ILQAVKLMEDMEV------AGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQP 569
+QA KL E E GF ++ + + G + A + +++ G+
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 570 SVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIY 629
+V T N+++N C G +E L + EKG+ P+ TYN LI + + M ++
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 630 KGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKR 689
M +G +P TYN ++ G CK + A + EM++ G + +++Y +L+ K+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 690 KKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECYLV 743
+E ++F +MR +V D + + + GN + L ++ E L+
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 326/642 (50%), Gaps = 19/642 (2%)
Query: 101 IWV---LMDIRSDYRLVLDFFDWACLRR--EPILEARCIVVQISVAAKDLKTAHGLIHDF 155
IWV L++++ D +L FF W+ R + +E+ CIV I A+ A+ ++ +
Sbjct: 109 IWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKE- 167
Query: 156 WAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYG 215
+ S A + L T VFD F VL++ L EA + F K+ +
Sbjct: 168 -----MVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 216 LVISVDSCNLFLSR---LSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKI 272
+ SCN L R L T D V + F + G +YNIMI C+C+ G +
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDD----VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 273 KEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSV 332
+ A L +M+ RG PD V+++++I+G+ +G L + EEM+ +P+ TYN++
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 333 VRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNI 392
+ CK K+ REM G+ P+ V Y+TL+D FCK G + A + + +MR + +
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 393 IPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFS 452
+P+ TYT++I C G + +A +L +EML G+E + + YTALIDG C A MK+A
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 453 LHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLC 512
L M + PN+ +Y AL G K+ ++ A ELL+E+ +G++ ++ Y + + GLC
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 513 KAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVV 572
I A +M +M+ G ++ YTT+MDAY KSG + LL +M + ++ +VV
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 573 TFNVLMNGFCMSGMIEDGEKLLKWMLEK-GLKPNAATYNPLIKQHCLRNDMRTTAKIYKG 631
TF VL++G C + ++ + GL+ NAA + +I C N + +++
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 632 MCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKK 691
M +G+ PD Y L+ G+ K N+ EA L +M + G L +Y +L+ G +
Sbjct: 639 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 692 YLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
+AR EEM G+ D + + ++E G + +EL
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/601 (28%), Positives = 297/601 (49%), Gaps = 28/601 (4%)
Query: 153 HDFWAKPNLDASIAFTH---FVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFE 209
+D W P L+ T +V R++ K+ DP + FF K + R F+
Sbjct: 90 NDLWDDPGLEKLFDLTLAPIWVPRVLVELKE---DPKLAFKFF-------KWSMTRNGFK 139
Query: 210 -KLLNYGLVISVDSCNLFLSRLSNTCDG-LRMVVKSFTEFPELGICWNTAS--------Y 259
+ +Y +V + LF +R+ + L+ +V S + + W+T + +
Sbjct: 140 HSVESYCIVAHI----LFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVF 195
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+ + L G ++EA +M+ P S + +++ + LG+ V + ++M
Sbjct: 196 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G +P +TYN ++ +CK V A + EM +G+VPD V Y ++IDGF K+G +
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
F+EM+ + PD++TY A+I FC GK+ + + EM G GL+P+ + Y+ L+D
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
+CK G M++A + +M + L PN TYT+L D CK G L A L +EM + G++
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
N+ TY ++++GLC A + +A +L M+ AG P+ +Y ++ + K+ M +A ELL
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
++ +G++P ++ + + G C IE + ++ M E G+K N+ Y L+ +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAW-FLHKEMVQKGFNLTTSS 678
+ + M I T+ +L+ G CK + + +A + ++ G +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAI 738
+ A+I G K + A LFE+M + GLV DR Y +D NF++GN L L D
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 739 E 739
E
Sbjct: 676 E 676
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 241/531 (45%), Gaps = 83/531 (15%)
Query: 146 KTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVF--DIFFQVLVEARKLNE 203
++ +GL+H F A + T V+R G+ P VF +I + + +
Sbjct: 228 RSCNGLLHRF-------AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMI 263
AR LFE++ GLV + N + L V F E ++ + +YN +I
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKV-GRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 264 HCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLK 323
+C C+FGK+ +M+ G P+VVS+ST+++ +C G +Q+ +K +M+ GL
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 324 PNPYTYNSVV-------------RL----------------------LCKTSKVVEAETI 348
PN YTY S++ RL LC ++ EAE +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+M G++P+ Y LI GF K N+ A L +E++G I PDLL Y I G C
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K+ A+ + +EM G++ + ++YT L+D Y K+G + L + M + + VVT
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 469 Y------------------------------------TALADGLCKSGELETANELLHEM 492
+ TA+ DGLCK ++E A L +M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 493 CRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEM 552
+KGL + Y S+++G K GN+L+A+ L + M G D YT+++ ++
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQL 699
Query: 553 VKAHELLRDMLDKGLQPS-VVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
KA L +M+ +G+ P V+ +VL + + G I++ +L ++++ L
Sbjct: 700 QKARSFLEEMIGEGIHPDEVLCISVLKKHYEL-GCIDEAVELQSYLMKHQL 749
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 38/308 (12%)
Query: 195 LVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICW 254
L +A ++ EA +LF K+ G++ ++ S N + + ++ E GI
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA-KNMDRALELLNELKGRGIKP 505
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
+ Y I LC KI+ A +++ +M+ G + + ++T+++ Y G L L+
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 315 EEMQIK------------------------------------GLKPNPYTYNSVVRLLCK 338
+EM+ GL+ N + +++ LCK
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 339 TSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLT 398
++V A T+ +M+ +G+VPD YT+L+DG K GNV A L D+M + + DLL
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 399 YTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNN-M 457
YT+++ G ++ +A EM+G G+ PDE++ +++ + + G + +A L + M
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 745
Query: 458 VHMRLTPN 465
H LT +
Sbjct: 746 KHQLLTSD 753
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 273/487 (56%)
Query: 234 CDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVS 293
C L + + + +LG +T +++ +I+ LC G++ EA L+ +M G P +++
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
+ ++NG C G++ + LI+ M G +PN TY V++++CK+ + A +LR+M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
+ I D V Y+ +IDG CK G++ A+ LF+EM D++ YT +I GFC G+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+ KL +M+ R + PD + ++ALID + K G +++A LH M+ ++P+ VTYT+L
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
DG CK +L+ AN +L M KG NI T+N ++NG CKA I ++L M + G
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
DT TY T++ +C+ G++ A EL ++M+ + ++P +V++ +L++G C +G E ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
+ + + ++ + YN +I C + + ++ + +G+ PD TYNI++ G CK
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREI 713
++ EA L ++M + G + +YN LI+ L ++ +L EE++R G D
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 714 YYFFVDI 720
VD+
Sbjct: 600 VKMVVDM 606
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 226/430 (52%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P ++ FS + + + VL L ++M++KG+ N YT + ++ C+ K+ A +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+ +++ G PD V ++TLI+G C G V+ A L D M + P L+T A++ G CL
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
GK+ +A L M+ G +P+E+ Y ++ CK+G A L M ++ + V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y+ + DGLCK G L+ A L +EM KG + +I Y +++ G C AG KL+ DM
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
PD ++ ++D + K G++ +A EL ++M+ +G+ P VT+ L++GFC ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+L M+ KG PN T+N LI +C N + ++++ M +G+ D TYN L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
QG C+ ++ A L +EMV + SY L+ G + +A E+FE++ + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 709 ADREIYYFFV 718
D IY +
Sbjct: 490 LDIGIYNIII 499
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 222/423 (52%)
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
+ L +EM +P ++ + ++ +T + + ++M +GI + + +I+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
C+ ++ A+ ++ L PD +T++ +I G CL G++ EA +L M+ G +P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
I AL++G C G + A L + MV PN VTY + +CKSG+ A ELL
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG 550
+M + ++L+ Y+ I++GLCK G++ A L +ME+ GF D YTT++ +C +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 551 EMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYN 610
+LLRDM+ + + P VV F+ L++ F G + + E+L K M+++G+ P+ TY
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 611 PLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQK 670
LI C N + + M ++G P+ T+NIL+ G+CKA + + L ++M +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 671 GFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEIT 730
G T +YN LI+GF + K A+ELF+EM + D Y +D + G E
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 731 LEL 733
LE+
Sbjct: 477 LEI 479
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 163/327 (49%)
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A LF EM P L+ ++ + T + L +M +G+ + + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
C+ + AFS ++ + P+ VT++ L +GLC G + A EL+ M G +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+ T N++VNGLC G + AV L++ M GF P+ TY ++ CKSG+ A ELL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R M ++ ++ V ++++++G C G +++ L M KG K + Y LI+ C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
AK+ + M + ITPD ++ L+ K ++EA LHKEM+Q+G + T +Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGG 706
+LI GF K + +A + + M G
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 142/284 (50%)
Query: 450 AFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVN 509
A L M R P ++ ++ L + ++ + + +L +M KG+ N+YT + ++N
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 510 GLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQP 569
C+ + A M + G+ PDT T++T+++ C G + +A EL+ M++ G +P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 570 SVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIY 629
+++T N L+NG C++G + D L+ M+E G +PN TY P++K C ++
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 630 KGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKR 689
+ M + I D Y+I++ G CK ++ A+ L EM KGF Y LI+GF
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 690 KKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
++ + +L +M + + D + +D +EG EL
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 187/398 (46%), Gaps = 20/398 (5%)
Query: 127 PILEARCIVVQISVAAKDLK-----------TAHGLIHDFWAKPNLDASI--AFTHFVER 173
P+L+ C Q ++A + L+ + +I D K D S+ AF F E
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK---DGSLDNAFNLFNEM 273
Query: 174 LIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNT 233
I +K +D ++ + A + ++ KL ++ + V + + +
Sbjct: 274 EIKGFK---ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 234 CDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVS 293
LR + E + GI +T +Y +I C+ ++ +A+ +L M +GC P++ +
Sbjct: 331 -GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
F+ +INGYC + L+L +M ++G+ + TYN++++ C+ K+ A+ + +EM+
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
++ + PD V Y L+DG C G A +F+++ + D+ Y II G C K+
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+A LF + +G++PD Y +I G CK G + +A L M +PN TY L
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGL 511
G+ + +L+ E+ R G ++ T +V+ L
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 163/390 (41%), Gaps = 70/390 (17%)
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+A LF EM P I ++ L + L M + N+ T + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM------ 527
+ C+ +L A + ++ + G + + T+++++NGLC G + +A++L++ M
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 528 -----------------EVA------------GFHPDTFTYTTIMDAYCKSGEMVKAHEL 558
+V+ GF P+ TY ++ CKSG+ A EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 559 LRDM------LD-----------------------------KGLQPSVVTFNVLMNGFCM 583
LR M LD KG + ++ + L+ GFC
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 584 SGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNT 643
+G +DG KLL+ M+++ + P+ ++ LI +R +++K M +GI+PD T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 644 YNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMR 703
Y L+ G CK + +A + MV KG ++N LI G+ K + ELF +M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 704 RGGLVADREIYYFFVDINFEEGNTEITLEL 733
G+VAD Y + E G E+ EL
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%)
Query: 483 ETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTI 542
+ A +L EM R + + ++ + + + + + L + ME+ G + +T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 543 MDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
++ C+ ++ A + ++ G +P VTF+ L+NG C+ G + + +L+ M+E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 603 KPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWF 662
KP T N L+ CL + + M G P+ TY +L+ CK+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 663 LHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
L ++M ++ L Y+ +I G K A LF EM G AD IY +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 327/655 (49%), Gaps = 48/655 (7%)
Query: 112 RLVLDFFDWAC----LRREPILEARCIVVQISVAAKDLKTAHGLIHDFWAKPNLDASIAF 167
+L L F W L + I++ CI I V A+ A ++ + +S F
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSG-KSSFVF 109
Query: 168 THFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFL 227
L+ TY+ S+P V+DI +V + + ++ ++F + YG SV +CN L
Sbjct: 110 G----ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 165
Query: 228 SRLSNTCDGLRMVVKSF-TEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRG 286
+ + G + V SF E + IC + A++NI+I+ LC G +++ L+ +ME G
Sbjct: 166 GSVVKS--GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 287 CSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAE 346
+P +V+++T+++ YC G + ++L++ M+ KG+ + TYN ++ LC+++++ +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 347 TILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGF 406
+LR+M + I P+ V Y TLI+GF G V A +L +EM + P+ +T+ A+I G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 407 CLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNV 466
G EA K+F+ M +GL P E+ Y L+DG CK A + M +
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 467 VTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGN---------- 516
+TYT + DGLCK+G L+ A LL+EM + G+ +I TY++++NG CK G
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 517 -------------------------ILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE 551
+ +A+++ E M + G D FT+ ++ + CK+G+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 552 MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNP 611
+ +A E +R M G+ P+ V+F+ L+NG+ SG + M + G P TY
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 612 LIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKG 671
L+K C +R K K + A D YN LL CK+ N+ +A L EMVQ+
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 672 FNLTTSSYNALIKGFLKRKKYLEARELFEEMR-RGGLVADREIYYFFVDINFEEG 725
+ +Y +LI G ++ K + A +E RG ++ ++ +Y FVD F+ G
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 180/694 (25%), Positives = 302/694 (43%), Gaps = 21/694 (3%)
Query: 53 FPDYSPKRPTIRDSEIVHQISTA----IKLRCSEPLRHTLKPFESKFRSDHLIWVLMDIR 108
F + K+P + IV + ++ R +P RH LK E S +V +
Sbjct: 56 FLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILK--ELSLMSGKSSFVFGALM 113
Query: 109 SDYRL------VLDFFDWACLRREPILEARCIVVQISVAA--KDLKTAHGLIHDFWAKPN 160
+ YRL V D LR I ++ I + + + T + ++ K
Sbjct: 114 TTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV-VKSG 172
Query: 161 LDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISV 220
D S+ F++ ++ + D F+I VL ++ L +K+ G ++
Sbjct: 173 EDVSVW--SFLKEMLK--RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 221 DSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLL 280
+ N L + ++ G+ + +YN++IH LCR +I + +LLL
Sbjct: 229 VTYNTVLHWYCKK-GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 281 QMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTS 340
M R P+ V+++T+ING+ G++ +L+ EM GL PN T+N+++
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347
Query: 341 KVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYT 400
EA + M +G+ P V Y L+DG CK A + M+ + +TYT
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 401 AIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHM 460
+I G C G + EA L +EM G++PD + Y+ALI+G+CK G K A + + +
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 461 RLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQA 520
L+PN + Y+ L C+ G L+ A + M +G + +T+N +V LCKAG + +A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 521 VKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+ M M G P+T ++ +++ Y SGE +KA + +M G P+ T+ L+ G
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 581 FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD 640
C G + + EK LK + + YN L+ C ++ ++ M + I PD
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS-YNALIKGFLKRKKYLEARELF 699
TY L+ G C+ A KE +G L Y + G K ++
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 700 EEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
E+M G D +D G E T +L
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 240/477 (50%), Gaps = 1/477 (0%)
Query: 258 SYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEM 317
++N+++ LC+ GK+ EA + M G P+ VSF +INGY GE + + +EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 318 QIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNV 377
G P +TY S+++ LCK + EAE L+ + D V+Y TL+ CK GN+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 378 AAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRG-LEPDEIVYTA 436
A A LF EM +I+PD TYT++I G C GK V A E RG + P++++YT
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 437 LIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKG 496
+DG KAG K M ++ TP++VT A+ DG + G++E N+LL EM +
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 497 LQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAH 556
N+ TYN +++G K ++ + L + + G PD T +++ C+S +
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 557 ELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQH 616
++L+ + +G++ TFN+L++ C +G I L+K M G+ + T + ++
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 617 CLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTT 676
+ + + + M QGI+P+ Y L+ G C+ ++K A+ + +EM+
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 677 SSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
+ +A+++ K K EA L M + LV + + + + GN LEL
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 238/561 (42%), Gaps = 73/561 (13%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKS 243
D F++ L +A K+ EA + + + G++ + S + ++ N+ +GL+
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSV 565
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F E ++G +Y ++ LC+ G ++EA L + + D V ++T++ C
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVV-------EAET--------- 347
G L + + L EM + + P+ YTY S++ LC+ K V EAE
Sbjct: 626 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685
Query: 348 -------------------ILREMM-NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEM 387
RE M N G PD V +IDG+ +MG + L EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 388 RGLN-----------------------------------IIPDLLTYTAIICGFCLTGKM 412
N I+PD LT +++ G C + +
Sbjct: 746 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805
Query: 413 VEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTAL 472
K+ + RG+E D + LI C G + AF L M + ++ + T A+
Sbjct: 806 EIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAM 865
Query: 473 ADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGF 532
L ++ + + +LHEM ++G+ Y ++NGLC+ G+I A + E+M
Sbjct: 866 VSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Query: 533 HPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEK 592
P + ++ A K G+ +A LLR ML L P++ +F LM+ C +G + + +
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 593 LLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQG-H 651
L M GLK + +YN LI C + DM ++Y+ M G + TY L++G
Sbjct: 986 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Query: 652 CKARNMKEAWFLHKEMVQKGF 672
+ A + K+++ +GF
Sbjct: 1046 ARETAFSGADIILKDLLARGF 1066
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 56/132 (42%)
Query: 604 PNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFL 663
N + Y+ LI+ + ++ + +I++ M G P T N +L K+ W
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 664 HKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFE 723
KEM+++ +++N LI + ++ L ++M + G Y + +
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 724 EGNTEITLELCD 735
+G + +EL D
Sbjct: 241 KGRFKAAIELLD 252
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 271/487 (55%)
Query: 234 CDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVS 293
C L + + + +LG NT +++ +I+ LC G++ EA L+ +M G PD+++
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
+T++NG C G+ + LI++M G +PN TY V+ ++CK+ + A +LR+M
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
+ I D V Y+ +IDG CK G++ A+ LF+EM I +++TY +I GFC G+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+ KL +M+ R + P+ + ++ LID + K G +++A LH M+H + P+ +TYT+L
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
DG CK L+ AN+++ M KG NI T+N ++NG CKA I ++L M + G
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
DT TY T++ +C+ G++ A EL ++M+ + + P++VT+ +L++G C +G E ++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
+ + + ++ + YN +I C + + ++ + +G+ P TYNI++ G CK
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREI 713
+ EA L ++M + G +YN LI+ L ++ +L EE++R G D
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 714 YYFFVDI 720
+D+
Sbjct: 616 IKMVIDM 622
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 138/275 (50%)
Query: 237 LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFST 296
LR + E GI +T +Y +I C+ + +A+ ++ M +GC P++ +F+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 297 IINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
+INGYC + L+L +M ++G+ + TYN++++ C+ K+ A+ + +EM+++
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
+ P+ V Y L+DG C G A +F+++ + D+ Y II G C K+ +A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 417 KLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGL 476
LF + +G++P Y +I G CK G + +A L M P+ TY L
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGL 511
G+ + +L+ E+ R G ++ T +++ L
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 183 SDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVK 242
+D ++ Q E KLN A++LF+++++ + ++ + + L L + + + ++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALE 494
Query: 243 SFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
F + + + + YNI+IH +C K+ +A L + L+G P V +++ +I G C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 303 YLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNV 362
G L L +M+ G P+ +TYN ++R ++ ++ E+ G D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 363 IYTTLID 369
+ID
Sbjct: 615 TIKMVID 621
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 292/559 (52%), Gaps = 1/559 (0%)
Query: 189 DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFP 248
+I L + K+++A LF ++ S+ N LS ++ + +V+ +
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM-NKFELVISLGEQMQ 110
Query: 249 ELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQ 308
LGI + +Y+I I+C CR ++ A +L +M G PD+V+ S+++NGYC+ +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 309 RVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLI 368
+ L+++M G KP+ +T+ +++ L +K EA ++ +M+ +G PD V Y T++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 369 DGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLE 428
+G CK G++ A L +M I D++ Y II G C M +A LF EM +G+
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 429 PDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANEL 488
PD Y++LI C G A L ++M+ ++ PNVVT++AL D K G+L A +L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 489 LHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCK 548
EM ++ + +I+TY+S++NG C + +A + E M P+ TY+T++ +CK
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 549 SGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAAT 608
+ + + EL R+M +GL + VT+ L++GF + ++ + + K M+ G+ PN T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 609 YNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMV 668
YN L+ C + +++ + + PD TYNI+++G CKA +++ W L +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 669 QKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE 728
KG + +YN +I GF ++ EA L ++M+ G + + Y + +G+ E
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 729 ITLELCDAAIECYLVGKAT 747
+ EL C G A+
Sbjct: 591 ASAELIKEMRSCGFAGDAS 609
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 259/501 (51%), Gaps = 40/501 (7%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VV 241
D + + IF +L+ A + K++ G + + + S L+ C R+ V
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS---SLLNGYCHSKRISDAV 173
Query: 242 KSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGY 301
+ E+G +T ++ +IH L K EA L+ QM RGC PD+V++ T++NG
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 302 CYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDN 361
C G++ L L+++M+ ++ + YN+++ LCK + +A + EM N+GI PD
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 362 VIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHE 421
Y++LI C G + A RL +M I P+++T++A+I F GK+VEAEKL+ E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 422 MLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGE 481
M+ R ++PD Y++LI+G+C + +A + M+ PNVVTY+ L G CK+
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 482 LETANELLHEMCRKGL-----------------------------------QLNIYTYNS 506
+E EL EM ++GL NI TYN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 507 IVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKG 566
+++GLCK G + +A+ + E ++ + PD +TY +++ CK+G++ EL ++ KG
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 567 LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTA 626
+ P+V+ +N +++GFC G E+ + LLK M E G PN+ TYN LI+ D +A
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 627 KIYKGMCAQGITPDGNTYNIL 647
++ K M + G D +T ++
Sbjct: 594 ELIKEMRSCGFAGDASTIGLV 614
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 190/347 (54%), Gaps = 6/347 (1%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
FTE GI + +Y+ +I CLC +G+ +A LL M R +P+VV+FS +I+ +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
G+L KL +EM + + P+ +TY+S++ C ++ EA+ + M+++ P+ V
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y+TLI GFCK V LF EM ++ + +TYT +I GF A+ +F +M+
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
G+ P+ + Y L+DG CK G + KA + + + P++ TY + +G+CK+G++E
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
EL + KG+ N+ YN++++G C+ G+ +A L++ M+ G P++ TY T++
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDG 590
A + G+ + EL+++M G T ++ N M+ DG
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN------MLHDG 621
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 139/270 (51%)
Query: 242 KSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGY 301
K + E + I + +Y+ +I+ C ++ EA + M + C P+VV++ST+I G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 302 CYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDN 361
C ++ ++L EM +GL N TY +++ + A+ + ++M++ G+ P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 362 VIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHE 421
+ Y L+DG CK G +A A +F+ ++ + PD+ TY +I G C GK+ + +LF
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 422 MLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGE 481
+ +G+ P+ I Y +I G+C+ G ++A SL M PN TY L + G+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 482 LETANELLHEMCRKGLQLNIYTYNSIVNGL 511
E + EL+ EM G + T + N L
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNML 618
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 288/575 (50%), Gaps = 33/575 (5%)
Query: 136 VQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKD--------------- 180
Q + + L +I +F KP+ THF R++ D
Sbjct: 129 AQFELQDEILSVVDWMIDEFGLKPD-------THFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 181 -WGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCD 235
WG P V F++ + L A +L A + E + +YGLV + + D
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 236 GLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELR-GCSPDVVSF 294
G + + EF G W+ S N+++H C+ G++++A + +M + G PD +F
Sbjct: 242 GALRIREQMVEF---GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 295 STIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMN 354
+T++NG C G ++ +++++ M +G P+ YTYNSV+ LCK +V EA +L +M+
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 355 QGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVE 414
+ P+ V Y TLI CK V A L + I+PD+ T+ ++I G CLT
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 415 AEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALAD 474
A +LF EM +G EPDE Y LID C G + +A ++ M +V+TY L D
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 475 GLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHP 534
G CK+ + A E+ EM G+ N TYN++++GLCK+ + A +LM+ M + G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 535 DTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLL 594
D +TY +++ +C+ G++ KA ++++ M G +P +VT+ L++G C +G +E KLL
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 595 KWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQG-ITPDGNTYNILLQGHCK 653
+ + KG+ YNP+I+ + +++ M Q PD +Y I+ +G C
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 654 ARN-MKEAWFLHKEMVQKGFNLTTSSYNALIKGFL 687
++EA E+++KGF SS L +G L
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 264/481 (54%), Gaps = 4/481 (0%)
Query: 226 FLSRLSNT-CDG--LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQM 282
F +R+ N DG L++V S + GI + +++N++I LCR +++ A L+L M
Sbjct: 156 FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 283 ELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKV 342
G PD +F+T++ GY G+L L++ E+M G + + N +V CK +V
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 343 VEAETILREMMNQ-GIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTA 401
+A ++EM NQ G PD + TL++G CK G+V A + D M PD+ TY +
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 402 IICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMR 461
+I G C G++ EA ++ +M+ R P+ + Y LI CK +++A L +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 462 LTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAV 521
+ P+V T+ +L GLC + A EL EM KG + + +TYN +++ LC G + +A+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 522 KLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGF 581
+++ ME++G TY T++D +CK+ + +A E+ +M G+ + VT+N L++G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 582 CMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDG 641
C S +ED +L+ M+ +G KP+ TYN L+ C D++ A I + M + G PD
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 642 NTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEE 701
TY L+ G CKA ++ A L + + KG NLT +YN +I+G +++K EA LF E
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 702 M 702
M
Sbjct: 636 M 636
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 37/245 (15%)
Query: 532 FHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGE 591
F P+ Y I+ +SG ++L DM + TF +L+ + + ++
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 592 KLLKWMLEK------------------------------------GLKPNAATYNPLIKQ 615
++ WM+++ G+KP+ +T+N LIK
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 616 HCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLT 675
C + +R + + M + G+ PD T+ ++QG+ + ++ A + ++MV+ G + +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 676 TSSYNALIKGFLKRKKYLEARELFEEM-RRGGLVADREIYYFFVDINFEEGNTEITLELC 734
S N ++ GF K + +A +EM + G D+ + V+ + G+ + +E+
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 735 DAAIE 739
D ++
Sbjct: 319 DVMLQ 323
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 296 bits (758), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 288/548 (52%), Gaps = 1/548 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KL++A LF +++ S+ + LS ++ + +V+ + LGI N +Y
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM-NKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+I+I+C CR ++ A +L +M G P++V+ S+++NGYC+ + + L+++M +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G +PN T+N+++ L +K EA ++ M+ +G PD V Y +++G CK G+
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A+ L ++M + P +L Y II G C M +A LF EM +G+ P+ + Y++LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
C G A L ++M+ ++ P+V T++AL D K G+L A +L EM ++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+I TY+S++NG C + +A ++ E M PD TY T++ +CK + + E+
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R+M +GL + VT+N+L+ G +G + +++ K M+ G+ PN TYN L+ C
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+ +++ + + P TYNI+++G CKA +++ W L + KG +Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
N +I GF ++ EA LF+EM+ G + + Y + +G+ E + EL
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 740 CYLVGKAT 747
C G A+
Sbjct: 600 CGFAGDAS 607
Score = 258 bits (660), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 251/457 (54%), Gaps = 15/457 (3%)
Query: 198 ARKLNEARKLFEKLLNYGLVISVDSCN-----LFLSRLSNTCDGL--RMVVKSFTEFPEL 250
+++++EA L +++ G + + N LFL ++ L RMV K P+L
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ--PDL 221
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
+Y ++++ LC+ G A LL +ME P V+ ++TII+G C +
Sbjct: 222 ------VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
L L +EM+ KG++PN TY+S++ LC + +A +L +M+ + I PD ++ LID
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
F K G + A +L+DEM +I P ++TY+++I GFC+ ++ EA+++F M+ + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
+ Y LI G+CK +++ + M L N VTY L GL ++G+ + A E+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG 550
EM G+ NI TYN++++GLCK G + +A+ + E ++ + P +TY +++ CK+G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 551 EMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYN 610
++ +L ++ KG++P VV +N +++GFC G E+ + L K M E G PN+ YN
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 611 PLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
LI+ D +A++ K M + G D +T ++
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 187/347 (53%), Gaps = 6/347 (1%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F E GI N +Y+ +I CLC +G+ +A LL M R +PDV +FS +I+ +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
G+L KL +EM + + P+ TY+S++ C ++ EA+ + M+++ PD V
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y TLI GFCK V +F EM ++ + +TY +I G G A+++F EM+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
G+ P+ + Y L+DG CK G ++KA + + ++ P + TY + +G+CK+G++E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
+L + KG++ ++ YN++++G C+ G+ +A L ++M+ G P++ Y T++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDG 590
A + G+ + EL+++M G T ++ N M+ DG
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN------MLHDG 619
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 42/350 (12%)
Query: 162 DASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVD 221
DAS + +ER I D F V+ KL EA KL+++++ + S+
Sbjct: 309 DASRLLSDMIERKI------NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI- 361
Query: 222 SCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQ 281
+Y+ +I+ C ++ EA +
Sbjct: 362 -----------------------------------VTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 282 MELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSK 341
M + C PDVV+++T+I G+C ++ +++ EM +GL N TYN +++ L +
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 342 VVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTA 401
A+ I +EM++ G+ P+ + Y TL+DG CK G + A +F+ ++ + P + TY
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 402 IICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMR 461
+I G C GK+ + LF + +G++PD + Y +I G+C+ G ++A +L M
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 462 LTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGL 511
PN Y L + G+ E + EL+ EM G + T + N L
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 286/549 (52%), Gaps = 3/549 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPE-LGICWNTAS 258
KL+EA LF +++ S+ + LS ++ +V+ SF E E LG+ N +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM-KKFDLVI-SFGEKMEILGVSHNLYT 102
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQ 318
YNIMI+CLCR ++ A +L +M G P +V+ ++++NG+C+ + + L+++M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 319 IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVA 378
G +P+ T+ ++V L + +K EA ++ M+ +G PD V Y +I+G CK G
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 379 AAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALI 438
A L ++M I D++ Y+ +I C + +A LF EM +G+ PD Y++LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 439 DGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQ 498
C G A L ++M+ ++ PNVVT+ +L D K G+L A +L EM ++ +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 499 LNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHEL 558
NI TYNS++NG C + +A ++ M PD TY T+++ +CK+ ++V EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 559 LRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCL 618
RDM +GL + VT+ L++GF + ++ + + K M+ G+ PN TYN L+ C
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 619 RNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS 678
+ +++ + + PD TYNI+ +G CKA +++ W L + KG +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAI 738
YN +I GF K+ EA LF +M+ G + D Y + + +G+ + EL
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 739 ECYLVGKAT 747
C G A+
Sbjct: 583 SCRFAGDAS 591
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 15/319 (4%)
Query: 162 DASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVIS 219
DAS + +ER I +P+V F+ + KL EA KLF++++ + +
Sbjct: 293 DASRLLSDMLERKI--------NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 220 VDSCNLFLSRLSNTC--DGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHL 277
+ + N S ++ C D L + FT + +YN +I+ C+ K+ +
Sbjct: 345 IVTYN---SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 278 LLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLC 337
L M RG + V+++T+I+G+ + + ++M G+ PN TYN+++ LC
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 338 KTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLL 397
K K+ +A + + + PD Y + +G CK G V + LF + + PD++
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 398 TYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNM 457
Y +I GFC G EA LF +M G PD Y LI + + G + L M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 458 VHMRLTPNVVTYTALADGL 476
R + TY + D L
Sbjct: 582 RSCRFAGDASTYGLVTDML 600
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 290 bits (741), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 284/548 (51%), Gaps = 1/548 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KL++A LF +++ + S+ N LS ++ + +V+ L I ++ SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM-NKFDLVISLGERMQNLRISYDLYSY 118
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
NI+I+C CR ++ A +L +M G PD+V+ S+++NGYC+ + + L+++M +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
+PN T+N+++ L +K EA ++ M+ +G PD Y T+++G CK G++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L +M I D++ YT II C + +A LF EM +G+ P+ + Y +LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
C G A L ++M+ ++ PNVVT++AL D K G+L A +L EM ++ +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+I+TY+S++NG C + +A + E M P+ TY T++ +CK+ + + EL
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R+M +GL + VT+N L+ G +G + +K+ K M+ G+ P+ TY+ L+ C
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+ +++ + + PD TYNI+++G CKA +++ W L + KG Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
+I GF ++ EA LF EM+ G + + Y + +G+ + EL
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 740 CYLVGKAT 747
C VG A+
Sbjct: 599 CGFVGDAS 606
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 241/444 (54%), Gaps = 5/444 (1%)
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
NT ++N +IH L K EA L+ +M RGC PD+ ++ T++NG C G++ L L+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKM 374
++M+ ++ + Y +++ LC V +A + EM N+GI P+ V Y +LI C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 375 GNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVY 434
G + A RL +M I P+++T++A+I F GK+VEAEKL+ EM+ R ++PD Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
++LI+G+C + +A + M+ PNVVTY L G CK+ +E EL EM +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
+GL N TYN+++ GL +AG+ A K+ + M G PD TY+ ++D CK G++ K
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
A + + ++P + T+N+++ G C +G +EDG L + KG+KPN Y +I
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNL 674
C + +++ M G P+ TYN L++ + + + L KEM GF
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 675 TTSSYNALIK----GFLKRKKYLE 694
S+ + +I G L+ K YLE
Sbjct: 604 DASTISMVINMLHDGRLE-KSYLE 626
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 201/368 (54%), Gaps = 11/368 (2%)
Query: 232 NTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
N D L + FTE GI N +YN +I CLC +G+ +A LL M R +P+V
Sbjct: 270 NVNDALNL----FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILRE 351
V+FS +I+ + G+L KL +EM + + P+ +TY+S++ C ++ EA+ +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGK 411
M+++ P+ V Y TLI GFCK V LF EM ++ + +TY +I G G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 412 MVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTA 471
A+K+F +M+ G+ PD I Y+ L+DG CK G ++KA + + ++ P++ TY
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 472 LADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAG 531
+ +G+CK+G++E +L + KG++ N+ Y ++++G C+ G +A L +M+ G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 532 FHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGE 591
P++ TY T++ A + G+ + EL+++M G T ++++N M+ DG
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN------MLHDG- 618
Query: 592 KLLKWMLE 599
+L K LE
Sbjct: 619 RLEKSYLE 626
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 14/282 (4%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
D+ T LI+ F LD + H E +I KD + ++ + +A+++ E
Sbjct: 359 DIFTYSSLINGFCMHDRLDEA---KHMFELMIS--KDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVKSFTEFPELGICWNTASYNI 261
+LF ++ GLV + + N + L + CD M K F + G+ + +Y+I
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD---MAQKIFKKMVSDGVPPDIITYSI 470
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
++ LC++GK+++A ++ ++ PD+ +++ +I G C G+++ L + +KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
+KPN Y +++ C+ EA+ + REM G +P++ Y TLI + G+ AA+
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
L EMR + D T + +I G++ EK + EML
Sbjct: 591 ELIKEMRSCGFVGDASTISMVI-NMLHDGRL---EKSYLEML 628
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 289 bits (739), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 259/480 (53%), Gaps = 6/480 (1%)
Query: 247 FPELGICW------NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIING 300
F LG W +T +++ +++ C G++ EA L+ +M PD+V+ ST+ING
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 301 YCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPD 360
C G + L LI+ M G +P+ TY V+ LCK+ A + R+M + I
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 361 NVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFH 420
V Y+ +ID CK G+ A LF+EM I D++TY+++I G C GK + K+
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 421 EMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSG 480
EM+GR + PD + ++ALID + K G + +A L+N M+ + P+ +TY +L DG CK
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 481 ELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYT 540
L AN++ M KG + +I TY+ ++N CKA + ++L ++ G P+T TY
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 541 TIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEK 600
T++ +C+SG++ A EL ++M+ +G+ PSVVT+ +L++G C +G + ++ + M +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 601 GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEA 660
+ YN +I C + + ++ + +G+ PD TYN+++ G CK ++ EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 661 WFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDI 720
L ++M + G +YN LI+ L + + EL EEM+ G AD +D+
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 269/520 (51%), Gaps = 3/520 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPEL-GICWNTAS 258
K+N+A LFE ++ + + N S ++ T +V F + EL GI + +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQ--YDLVLGFCKGMELNGIEHDMYT 107
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQ 318
IMI+C CR K+ A +L + G PD ++FST++NG+C G + + L++ M
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 319 IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVA 378
+P+ T ++++ LC +V EA ++ M+ G PD V Y +++ CK GN A
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 379 AAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALI 438
A LF +M NI ++ Y+ +I C G +A LF+EM +G++ D + Y++LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 439 DGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQ 498
G C G + M+ + P+VVT++AL D K G+L A EL +EM +G+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 499 LNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHEL 558
+ TYNS+++G CK + +A ++ + M G PD TY+ ++++YCK+ + L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 559 LRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCL 618
R++ KGL P+ +T+N L+ GFC SG + ++L + M+ +G+ P+ TY L+ C
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 619 RNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS 678
++ +I++ M +T YNI++ G C A + +AW L + KG +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
YN +I G K+ EA LF +M+ G D Y +
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 224/415 (53%), Gaps = 3/415 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
+++EA L ++++ YG + L+RL + + + + F + E I + Y
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKMEERNIKASVVQY 248
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+I+I LC+ G +A L +ME++G DVV++S++I G C G+ K++ EM
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
+ + P+ T+++++ + K K++EA+ + EM+ +GI PD + Y +LIDGFCK +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A ++FD M PD++TY+ +I +C ++ + +LF E+ +GL P+ I Y L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
G+C++G + A L MV + P+VVTY L DGLC +GEL A E+ +M + + L
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
I YN I++G+C A + A L + G PD TY ++ CK G + +A L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 560 RDMLDKGLQPSVVTFNVLMNG-FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLI 613
R M + G P T+N+L+ SG+I E L++ M G +++T +I
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIKMVI 602
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
+ E GI +T +YN +I C+ + EA+ + M +GC PD+V++S +IN YC
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
+ ++L E+ KGL PN TYN++V C++ K+ A+ + +EM+++G+ P V
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y L+DG C G + A +F++M+ + + Y II G C K+ +A LF +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
+G++PD + Y +I G CK G + +A L M TP+ TY L L
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGL 511
++ EL+ EM G + T +++ L
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 47/301 (15%)
Query: 142 AKDLKTAHGLIHDFWAKPNL-DASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEA 198
A D T + LI F + L +A+ F V + G +P + + I +A
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSK--------GCEPDIVTYSILINSYCKA 398
Query: 199 RKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTAS 258
+++++ +LF ++ + GL+ NT +
Sbjct: 399 KRVDDGMRLFREISSKGLI------------------------------------PNTIT 422
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQ 318
YN ++ C+ GK+ A L +M RG P VV++ +++G C GEL + L++ E+MQ
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 319 IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVA 378
+ YN ++ +C SKV +A ++ + ++G+ PD V Y +I G CK G+++
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 379 AAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALI 438
A LF +M+ PD TY +I ++ + +L EM G D +I
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Query: 439 D 439
D
Sbjct: 603 D 603
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 126 EPILEARCIVVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFV------------ER 173
EP + I++ AK + L + +K + +I + V +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 174 LIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS 231
L G P V + I L + +LN+A ++FEK+ + + + N+ + +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 232 NTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
N + F + G+ + +YN+MI LC+ G + EA +L +M+ GC+PD
Sbjct: 502 NASK-VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLL 336
+++ +I + L ++LIEEM++ G + T V+ +L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 286/548 (52%), Gaps = 1/548 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KL++A LF ++ S+ + LS ++ + +V+ + LGI N +Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTY 119
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+I+I+C CR ++ A +L +M G PD+V+ ++++NG+C+ + + L+ +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G +P+ +T+N+++ L + ++ EA ++ M+ +G PD V Y +++G CK G++
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L +M I P ++ Y II C + +A LF EM +G+ P+ + Y +LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
C G A L ++M+ ++ PNVVT++AL D K G+L A +L EM ++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+I+TY+S++NG C + +A + E M P+ TY T++ +CK+ + + EL
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R+M +GL + VT+ L++GF + ++ + + K M+ G+ P+ TY+ L+ C
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+ T +++ + + PD TYNI+++G CKA +++ W L + KG +Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
++ GF ++ EA LF EM+ G + D Y + + +G+ + EL
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 740 CYLVGKAT 747
C VG A+
Sbjct: 600 CRFVGDAS 607
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 257/499 (51%), Gaps = 40/499 (8%)
Query: 186 HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VVKS 243
+ + I +L+ A + K++ G + + N S L+ C G R+ V
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLN---SLLNGFCHGNRISDAVSL 173
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
+ E+G ++ ++N +IH L R + EA L+ +M ++GC PD+V++ ++NG C
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 304 LGELQRVLKLIE-----------------------------------EMQIKGLKPNPYT 328
G++ L L++ EM KG++PN T
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 329 YNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMR 388
YNS++R LC + +A +L +M+ + I P+ V ++ LID F K G + A +L+DEM
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 389 GLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMK 448
+I PD+ TY+++I GFC+ ++ EA+ +F M+ + P+ + Y LI G+CKA +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 449 KAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIV 508
+ L M L N VTYT L G ++ E + A + +M G+ +I TY+ ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 509 NGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQ 568
+GLC G + A+ + E ++ + PD +TY +++ CK+G++ +L + KG++
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 569 PSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKI 628
P+VVT+ +M+GFC G+ E+ + L + M E+G P++ TYN LI+ H D +A++
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 629 YKGMCAQGITPDGNTYNIL 647
+ M + D +T ++
Sbjct: 594 IREMRSCRFVGDASTIGLV 612
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
D+ T LI+ F LD + H E +I KD + ++ + +A++++E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEA---KHMFELMIS--KDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVKSFTEFPELGICWNTASYNI 261
+LF ++ GLV + + + + CD ++V F + G+ + +Y+I
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV---FKQMVSDGVLPDIMTYSI 471
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
++ LC GK++ A ++ ++ PD+ +++ +I G C G+++ L + +KG
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
+KPN TY +++ C+ EA+ + REM +G +PD+ Y TLI + G+ AA+
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 382 RLFDEMRGLNIIPDLLT 398
L EMR + D T
Sbjct: 592 ELIREMRSCRFVGDAST 608
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 269/508 (52%), Gaps = 41/508 (8%)
Query: 233 TCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEA-HLLLLQMELRG--CSP 289
T D + +V++ TE LG N SYNI++ LC + +EA LL + + RG P
Sbjct: 138 TSDAMDIVLRRMTE---LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 290 DVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETIL 349
DVVS++T+ING+ G+ + EM +G+ P+ TYNS++ LCK + +A +L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
M+ G++PD + Y +++ G+C G A +MR + PD++TY+ ++ C
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 410 GKMVEAEKLFHEMLGRGLE-----------------------------------PDEIVY 434
G+ +EA K+F M RGL+ PD V+
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
+ LI Y K G + +A + + M L PN VTY A+ LCKSG +E A +M
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
+GL YNS+++GLC +A +L+ +M G +T + +I+D++CK G +++
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
+ +L M+ G++P+V+T+N L+NG+C++G +++ KLL M+ GLKPN TY+ LI
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNL 674
+C + M ++K M + G++PD TYNI+LQG + R A L+ + + G +
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 675 TTSSYNALIKGFLKRKKYLEARELFEEM 702
S+YN ++ G K K +A ++F+ +
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 265/573 (46%), Gaps = 44/573 (7%)
Query: 203 EARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELG---ICWNTASY 259
+AR +F++LL G S+ N L+ ++ D V + G + + +Y
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR--DSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 260 NIMIHCLCRFGK-----------IKEA-------------------------HLLLLQME 283
I+I C CR G+ IK+ ++L +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 284 LRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEM---QIKGLKPNPYTYNSVVRLLCKTS 340
GC P+V S++ ++ G C Q L+L+ M + G P+ +Y +V+ K
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 341 KVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYT 400
+A + EM+++GI+PD V Y ++I CK + A + + M ++PD +TY
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 401 AIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHM 460
+I+ G+C +G+ EA +M G+EPD + Y+ L+D CK G +A + ++M
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 461 RLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQA 520
L P + TY L G G L + LL M R G+ + Y ++ ++ K G + QA
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 521 VKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+ + M G +P+ TY ++ CKSG + A M+D+GL P + +N L++G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 581 FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD 640
C E E+L+ ML++G+ N +N +I HC + + K+++ M G+ P+
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
TYN L+ G+C A M EA L MV G T +Y+ LI G+ K + +A LF+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 701 EMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
EM G+ D Y + F+ T EL
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 265/554 (47%), Gaps = 5/554 (0%)
Query: 179 KDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDG 236
+ GS P V + + ++A + ++L+ G++ V + N ++ L
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA-QA 246
Query: 237 LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFST 296
+ ++ + G+ + +YN ++H C G+ KEA L +M G PDVV++S
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 297 IINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
+++ C G K+ + M +GLKP TY ++++ +VE +L M+ G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
I PD+ +++ LI + K G V A +F +MR + P+ +TY A+I C +G++ +A
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 417 KLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGL 476
F +M+ GL P IVY +LI G C ++A L M+ + N + + ++ D
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDT 536
CK G + + +L M R G++ N+ TYN+++NG C AG + +A+KL+ M G P+T
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 537 FTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKW 596
TY+T+++ YCK M A L ++M G+ P ++T+N+++ G + ++L
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARN 656
+ E G + +TYN ++ C ++++ +C + + T+NI++ K
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 657 MKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYF 716
EA L G +Y + + + + E +LF M G D + F
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 717 FVDINFEEGNTEIT 730
V + G EIT
Sbjct: 727 IVRELLQRG--EIT 738
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 244/491 (49%), Gaps = 11/491 (2%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKL 201
D T + ++H + + +I F + + G +P V + + L + +
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGF-------LKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 202 NEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNI 261
EARK+F+ + GL + + L + T L + GI + ++I
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
+I + GK+ +A L+ +M +G +P+ V++ +I C G ++ + E+M +G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
L P YNS++ LC +K AE ++ EM+++GI + + + ++ID CK G V +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGY 441
+LF+ M + + P+++TY +I G+CL GKM EA KL M+ GL+P+ + Y+ LI+GY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 442 CKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
CK M+ A L M ++P+++TY + GL ++ A EL + G Q+ +
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
TYN I++GLCK A+++ +++ + + T+ ++DA K G +A +L
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
GL P+ T+ ++ G++E+ ++L M + G ++ N ++++ R +
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 622 MRTTAKIYKGM 632
+ T A Y M
Sbjct: 737 I-TRAGTYLSM 746
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 177/370 (47%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F++ + G+ N +Y +I LC+ G++++A L QM G SP + ++++I+G C
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
+ +R +LI EM +G+ N +NS++ CK +V+E+E + M+ G+ P+ +
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y TLI+G+C G + A +L M + + P+ +TY+ +I G+C +M +A LF EM
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
G+ PD I Y ++ G + A L+ + + TY + GLCK+ +
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A ++ +C L+L T+N +++ L K G +A L G P+ +TY +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLK 603
+ G + + +L M D G N ++ G I L + EK
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753
Query: 604 PNAATYNPLI 613
A+T + I
Sbjct: 754 LEASTASLFI 763
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 189/406 (46%), Gaps = 6/406 (1%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTY---KDWGSDPHV--FDIFFQVLVEA 198
DL +G+ D + L + A V++ + + + G +P+ + +L ++
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 199 RKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTAS 258
++ +A FE++++ GL N + L TC+ + E + GIC NT
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC-TCNKWERAEELILEMLDRGICLNTIF 478
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQ 318
+N +I C+ G++ E+ L M G P+V++++T+INGYC G++ +KL+ M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 319 IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVA 378
GLKPN TY++++ CK S++ +A + +EM + G+ PD + Y ++ G + A
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 379 AAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALI 438
AA L+ + +L TY I+ G C +A ++F + L+ + + +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 439 DGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQ 498
D K G +A L L PN TY +A+ + G LE ++L M G
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718
Query: 499 LNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMD 544
++ N IV L + G I +A + ++ F + T + +D
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 270/534 (50%), Gaps = 1/534 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
K ++A LF ++ + +V N S ++ T +V+ + GI + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT-KQYELVLALCKQMESKGIAHSIYTL 126
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+IMI+C CR K+ A + ++ G PD V F+T++NG C + L+L++ M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G KP T N++V LC KV +A ++ M+ G P+ V Y +++ CK G A
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L +M NI D + Y+ II G C G + A LF+EM +G + D I Y LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
G+C AG L +M+ +++PNVVT++ L D K G+L A++LL EM ++G+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
N TYNS+++G CK + +A+++++ M G PD T+ +++ YCK+ + EL
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R+M +G+ + VT+N L+ GFC SG +E +KL + M+ + ++P+ +Y L+ C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
++ +I+ + + D Y I++ G C A + +AW L + KG L +Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
N +I ++ +A LF +M G D Y + + + + EL
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 281/528 (53%), Gaps = 3/528 (0%)
Query: 185 PHVFDI--FFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVK 242
P V D F + + ++ L +++ + G+ S+ + ++ ++ C L
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR-CRKLSYAFS 144
Query: 243 SFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
+ + +LG +T +N +++ LC ++ EA L+ +M G P +++ +T++NG C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 303 YLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNV 362
G++ + LI+ M G +PN TY V+ ++CK+ + A +LR+M + I D V
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 363 IYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEM 422
Y+ +IDG CK G++ A+ LF+EM D++TY +I GFC G+ + KL +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 423 LGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGEL 482
+ R + P+ + ++ LID + K G +++A L M+ + PN +TY +L DG CK L
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 483 ETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTI 542
E A +++ M KG +I T+N ++NG CKA I ++L +M + G +T TY T+
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 543 MDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
+ +C+SG++ A +L ++M+ + ++P +V++ +L++G C +G +E ++ + + +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 603 KPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWF 662
+ + Y +I C + + ++ + +G+ D YNI++ C+ ++ +A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 663 LHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
L ++M ++G +YN LI+ L A EL EEM+ G AD
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F E G + +YN +I C G+ + LL M R SP+VV+FS +I+ +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
G+L+ +L++EM +G+ PN TYNS++ CK +++ EA ++ M+++G PD +
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
+ LI+G+CK + LF EM +I + +TY ++ GFC +GK+ A+KLF EM+
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
R + PD + Y L+DG C G ++KA + + ++ ++ Y + G+C + +++
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A +L + KG++L+ YN +++ LC+ ++ +A L M G PD TY ++
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGE 591
A+ + A EL+ +M G V T +++N M+ GE
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN------MLSSGE 627
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 186/398 (46%), Gaps = 20/398 (5%)
Query: 127 PILEARCIVVQISVAAKDLK-----------TAHGLIHDFWAKPNLDASI--AFTHFVER 173
P+L C Q ++A + L+ + +I D K D S+ AF F E
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK---DGSLDNAFNLFNEM 289
Query: 174 LIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNT 233
I +K +D ++ A + ++ KL ++ + +V + ++ +
Sbjct: 290 EIKGFK---ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 234 CDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVS 293
LR + E + GI NT +YN +I C+ +++EA ++ M +GC PD+++
Sbjct: 347 -GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
F+ +INGYC + L+L EM ++G+ N TYN++V+ C++ K+ A+ + +EM+
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
++ + PD V Y L+DG C G + A +F ++ + D+ Y II G C K+
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+A LF + +G++ D Y +I C+ + KA L M P+ +TY L
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGL 511
+ TA EL+ EM G ++ T ++N L
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 175/417 (41%), Gaps = 71/417 (17%)
Query: 388 RGLNIIPDL-LTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGG 446
RG + D L+Y + + K +A LF +M+ P I + L K
Sbjct: 44 RGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQ 103
Query: 447 MKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNS 506
+ +L M + ++ T + + + C+ +L A + ++ + G + + +N+
Sbjct: 104 YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNT 163
Query: 507 I-----------------------------------VNGLCKAGNILQAVKLMEDMEVAG 531
+ VNGLC G + AV L++ M G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 532 FHPDTFTYTTIMDAYCKSGEMVKAHELLRDM------LD--------------------- 564
F P+ TY +++ CKSG+ A ELLR M LD
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 565 --------KGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQH 616
KG + ++T+N L+ GFC +G +DG KLL+ M+++ + PN T++ LI
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 617 CLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTT 676
+R ++ K M +GI P+ TYN L+ G CK ++EA + M+ KG +
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 677 SSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
++N LI G+ K + + ELF EM G++A+ Y V + G E+ +L
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/582 (29%), Positives = 299/582 (51%), Gaps = 48/582 (8%)
Query: 143 KDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLN 202
KDL +A + ++ K +A+TH + L AR+++
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV---------------------ARRID 305
Query: 203 EARKLFEKLLNYGLVISVDSCNLFLSRLSNT---CDGLRMVVKSFTEFPELGICWNTASY 259
EA LF K+ + +V + + + L + + L +V E E GI N +Y
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV----KEMEETGIKPNIHTY 361
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
++I LC K ++A LL QM +G P+V++++ +INGYC G ++ + ++E M+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
+ L PN TYN +++ CK S V +A +L +M+ + ++PD V Y +LIDG C+ GN +
Sbjct: 422 RKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
AYRL M ++PD TYT++I C + ++ EA LF + +G+ P+ ++YTALID
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
GYCKAG + +A + M+ PN +T+ AL GLC G+L+ A L +M + GLQ
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+ T +++ L K G+ A + M +G PD TYTT + YC+ G ++ A +++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK----- 614
M + G+ P + T++ L+ G+ G +LK M + G +P+ T+ LIK
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 615 ----------QHCLRNDM---RTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAW 661
+ C ++M T ++ + M +TP+ +Y L+ G C+ N++ A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 662 FLHKEMVQ-KGFNLTTSSYNALIKGFLKRKKYLEARELFEEM 702
+ M + +G + + +NAL+ K KK+ EA ++ ++M
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 276/542 (50%), Gaps = 11/542 (2%)
Query: 194 VLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS--NTCDGLRMVVKSFTEFPELG 251
VL RK+N+ + FE L Y L+I N L+ L+ D ++ V + E E
Sbjct: 162 VLDLCRKMNKDER-FE--LKYKLIIGC--YNTLLNSLARFGLVDEMKQV---YMEMLEDK 213
Query: 252 ICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVL 311
+C N +YN M++ C+ G ++EA+ + ++ G PD +++++I GYC +L
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 312 KLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGF 371
K+ EM +KG + N Y ++ LC ++ EA + +M + P YT LI
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 372 CKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDE 431
C + A L EM I P++ TYT +I C K +A +L +ML +GL P+
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 432 IVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHE 491
I Y ALI+GYCK G ++ A + M +L+PN TY L G CKS + A +L++
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452
Query: 492 MCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE 551
M + + ++ TYNS+++G C++GN A +L+ M G PD +TYT+++D+ CKS
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 552 MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNP 611
+ +A +L + KG+ P+VV + L++G+C +G +++ +L+ ML K PN+ T+N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 612 LIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKG 671
LI C ++ + + M G+ P +T IL+ K + A+ ++M+ G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 672 FNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITL 731
+Y I+ + + + L+A ++ +MR G+ D Y + + G T
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 732 EL 733
++
Sbjct: 693 DV 694
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/572 (24%), Positives = 258/572 (45%), Gaps = 66/572 (11%)
Query: 174 LIYTYKDWGSDP--HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS 231
L+ ++ G P H + + L K +AR+L ++L GL+ +V + N ++
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 232 NTCDGLRMVVKSFTEFPEL----GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGC 287
R +++ + EL + NT +YN +I C+ + +A +L +M R
Sbjct: 405 K-----RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV 458
Query: 288 SPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAET 347
PDVV+++++I+G C G +L+ M +GL P+ +TY S++ LCK+ +V EA
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 348 ILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFC 407
+ + +G+ P+ V+YT LIDG+CK G V A+ + ++M N +P+ LT+ A+I G C
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 408 LTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVV 467
GK+ EA L +M+ GL+P T LI K G A+S M+ P+
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNG----------------- 510
TYT C+ G L A +++ +M G+ +++TY+S++ G
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 511 ---------------------------------LCKAGNILQ---AVKLMEDMEVAGFHP 534
LC N+++ V+L+E M P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 535 DTFTYTTIMDAYCKSGEMVKAHELLRDML-DKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
+ +Y ++ C+ G + A ++ M ++G+ PS + FN L++ C + K+
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
+ M+ G P + LI + + +++ + G D + I++ G K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKG 685
++ + L M + G ++ +Y+ LI+G
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 179/338 (52%), Gaps = 1/338 (0%)
Query: 399 YTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMV 458
Y ++ G + E ++++ EML + P+ Y +++GYCK G +++A + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 459 HMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNIL 518
L P+ TYT+L G C+ +L++A ++ +EM KG + N Y +++GLC A I
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 519 QAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLM 578
+A+ L M+ P TYT ++ + C S +A L+++M + G++P++ T+ VL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 579 NGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGIT 638
+ C E +LL MLEKGL PN TYN LI +C R + + + M ++ ++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 639 PDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEAREL 698
P+ TYN L++G+CK+ N+ +A + +M+++ +YN+LI G + + A L
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 699 FEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDA 736
M GLV D+ Y +D + E +L D+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 202/462 (43%), Gaps = 64/462 (13%)
Query: 145 LKTAHGLIHDFWAKPNLDASIAFTHFVER---LIYTYKDWGSDPHVFDIFFQVLVE---- 197
L GL+ D W ++ S+ + VE L + + G +P+V + + L++
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV--VMYTALIDGYCK 544
Query: 198 ARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTA 257
A K++EA + EK+L S C P N+
Sbjct: 545 AGKVDEAHLMLEKML------------------SKNC------------LP------NSL 568
Query: 258 SYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEM 317
++N +IH LC GK+KEA LL +M G P V + + +I+ G+ ++M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 318 QIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNV 377
G KP+ +TY + ++ C+ ++++AE ++ +M G+ PD Y++LI G+ +G
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 378 AAAYRLFDEMRGLNIIPDLLTYTAII---------------CGFCLTGKMVEAE---KLF 419
A+ + MR P T+ ++I C M+E + +L
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 420 HEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMR-LTPNVVTYTALADGLCK 478
+M+ + P+ Y LI G C+ G ++ A + ++M ++P+ + + AL CK
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 479 SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT 538
+ A +++ +M G + + ++ GL K G + + +++ G++ D
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 539 YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+ I+D K G + +EL M G + S T+++L+ G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%)
Query: 498 QLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHE 557
+L I YN+++N L + G + + ++ +M P+ +TY +++ YCK G + +A++
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 558 LLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHC 617
+ +++ GL P T+ L+ G+C ++ K+ M KG + N Y LI C
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 618 LRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTS 677
+ + ++ M P TY +L++ C + EA L KEM + G
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 678 SYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
+Y LI + K+ +AREL +M GL+ + Y ++ + G E +++ +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 259/509 (50%)
Query: 239 MVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTII 298
+V+ + LGI N +YNI+I+C CR +I A LL +M G P +V+ S+++
Sbjct: 28 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 87
Query: 299 NGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIV 358
NGYC+ + + L+++M G +P+ T+ +++ L +K EA ++ M+ +G
Sbjct: 88 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 147
Query: 359 PDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKL 418
P+ V Y +++G CK G++ A+ L ++M I D++ + II C + +A L
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 419 FHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCK 478
F EM +G+ P+ + Y++LI C G A L ++M+ ++ PN+VT+ AL D K
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 479 SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT 538
G+ A +L +M ++ + +I+TYNS++NG C + +A ++ E M PD T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 539 YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWML 598
Y T++ +CKS + EL R+M +GL VT+ L+ G G ++ +K+ K M+
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 599 EKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMK 658
G+ P+ TY+ L+ C + +++ M I D Y +++G CKA +
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 659 EAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
+ W L + KG +YN +I G ++ EA L ++M+ G + D Y +
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 719 DINFEEGNTEITLELCDAAIECYLVGKAT 747
+ +G+ + EL C VG A+
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDAS 536
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 231/431 (53%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P + F+ +++ + + V+ L E+MQ G+ N YTYN ++ C+ S++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G P V ++L++G+C ++ A L D+M + PD +T+T +I G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K EA L M+ RG +P+ + Y +++G CK G + AF+L N M ++ +VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+ + D LCK ++ A L EM KG++ N+ TY+S+++ LC G A +L+ DM
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
+P+ T+ ++DA+ K G+ V+A +L DM+ + + P + T+N L+NGFCM ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+++ ++M+ K P+ TYN LIK C + ++++ M +G+ D TY L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
QG + A + K+MV G +Y+ L+ G K +A E+F+ M++ +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 709 ADREIYYFFVD 719
D IY ++
Sbjct: 428 LDIYIYTTMIE 438
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 222/393 (56%)
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
N +Y ++++ LC+ G I A LL +ME DVV F+TII+ C + L L
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKM 374
+EM+ KG++PN TY+S++ LC + +A +L +M+ + I P+ V + LID F K
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 375 GNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVY 434
G A +L D+M +I PD+ TY ++I GFC+ ++ +A+++F M+ + PD Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
LI G+CK+ ++ L M H L + VTYT L GL G+ + A ++ +M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
G+ +I TY+ +++GLC G + +A+++ + M+ + D + YTT+++ CK+G++
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
+L + KG++P+VVT+N +++G C ++++ LLK M E G P++ TYN LI+
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
H D +A++ + M + D +T ++
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 220/412 (53%)
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
P+ + +N ++ + K K ++ +M GI + Y LI+ FC+ ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 384 FDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCK 443
+M L P ++T ++++ G+C ++ +A L +M+ G PD I +T LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 444 AGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYT 503
+A +L + MV PN+VTY + +GLCK G+++ A LL++M ++ ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 504 YNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDML 563
+N+I++ LCK ++ A+ L ++ME G P+ TY++++ C G A +LL DM+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 564 DKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMR 623
+K + P++VTFN L++ F G + EKL M+++ + P+ TYN LI C+ + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 624 TTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALI 683
++++ M ++ PD +TYN L++G CK++ +++ L +EM +G T +Y LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 684 KGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
+G A+++F++M G+ D Y +D G E LE+ D
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 187/377 (49%)
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGK 411
M+ +P + L+ KM L ++M+ L I +L TY +I FC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 412 MVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTA 471
+ A L +M+ G EP + ++L++GYC + A +L + MV M P+ +T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 472 LADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAG 531
L GL + A L+ M ++G Q N+ TY +VNGLCK G+I A L+ ME A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 532 FHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGE 591
D + TI+D+ CK + A L ++M KG++P+VVT++ L++ C G D
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 592 KLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGH 651
+LL M+EK + PN T+N LI K++ M + I PD TYN L+ G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 652 CKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADR 711
C + +A + + MV K +YN LIKGF K K+ + ELF EM GLV D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 712 EIYYFFVDINFEEGNTE 728
Y + F +G+ +
Sbjct: 361 VTYTTLIQGLFHDGDCD 377
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 15/319 (4%)
Query: 162 DASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVIS 219
DAS + +E+ I +P++ F+ V+ K EA KL + ++ +
Sbjct: 238 DASQLLSDMIEKKI--------NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 220 VDSCNLFLSRLSNTCDGLRM-VVKSFTEFPELGICW-NTASYNIMIHCLCRFGKIKEAHL 277
+ + N S ++ C R+ K EF C+ + +YN +I C+ ++++
Sbjct: 290 IFTYN---SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 278 LLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLC 337
L +M RG D V+++T+I G + G+ K+ ++M G+ P+ TY+ ++ LC
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 338 KTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLL 397
K+ +A + M I D IYTT+I+G CK G V + LF + + P+++
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 398 TYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNM 457
TY +I G C + EA L +M G PD Y LI + + G + L M
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 458 VHMRLTPNVVTYTALADGL 476
R + T +A+ L
Sbjct: 527 RSCRFVGDASTIGLVANML 545
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 14/282 (4%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
D+ T + LI+ F LD + F+ KD D ++ + +++++ +
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFM-----VSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVKSFTEFPELGICWNTASYNI 261
+LF ++ + GLV + + L CD + K F + G+ + +Y+I
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ---KVFKQMVSDGVPPDIMTYSI 400
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
++ LC GK+++A + M+ D+ ++T+I G C G++ L + +KG
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
+KPN TYN+++ LC + EA +L++M G +PD+ Y TLI + G+ AA+
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
L EMR + D T ++ G++ +K F +ML
Sbjct: 521 ELIREMRSCRFVGDAST-IGLVANMLHDGRL---DKSFLDML 558
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 279/515 (54%), Gaps = 10/515 (1%)
Query: 222 SCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQ 281
+CN + +L N+ G+ + +K G + +S+N ++ +C+ G++K A ++
Sbjct: 23 TCNKHIHQLINSNCGI-LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHS 81
Query: 282 MELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG---LKPNPYTYNSVVRLLCK 338
M GC PDV+S++++I+G+C G+++ ++E ++ KP+ ++NS+ K
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 339 TSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLT 398
K+++ + +M + P+ V Y+T ID FCK G + A + F M+ + P+++T
Sbjct: 142 M-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 399 YTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMV 458
+T +I G+C G + A L+ EM + + + YTALIDG+CK G M++A +++ MV
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 459 HMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNIL 518
R+ PN + YT + DG + G+ + A + L +M +G++L+I Y I++GLC G +
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 519 QAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLM 578
+A +++EDME + PD +TT+M+AY KSG M A + ++++G +P VV + ++
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 579 NGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGIT 638
+G +G + E ++ + +EK N Y LI C D +++ + G+
Sbjct: 381 DGIAKNGQLH--EAIVYFCIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 639 PDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEAREL 698
PD Y + G CK N+ +A+ L MVQ+G L +Y LI G + +EAR++
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 699 FEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
F+EM G+ D ++ + +EGN +L
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 223/463 (48%), Gaps = 34/463 (7%)
Query: 248 PELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRG---CSPDVVSFSTIINGYCYL 304
P G + SYN +I CR G I+ A L+L + C PD+VSF+++ NG+ +
Sbjct: 83 PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM 142
Query: 305 GELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIY 364
L V + M +K PN TY++ + CK+ ++ A M + P+ V +
Sbjct: 143 KMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 365 TTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLG 424
T LIDG+CK G++ A L+ EMR + + +++TYTA+I GFC G+M AE+++ M+
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 425 RGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELET 484
+EP+ +VYT +IDG+ + G A M++ + ++ Y + GLC +G+L+
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 485 ANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT------ 538
A E++ +M + L ++ + +++N K+G + AV + + GF PD
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 539 ------------------------YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTF 574
YT ++DA CK G+ ++ L + + GL P +
Sbjct: 382 GIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 575 NVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCA 634
+ G C G + D KL M+++GL + Y LI + M +++ M
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 635 QGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTS 677
GI+PD +++L++ + K NM A L +M ++G S
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 244/476 (51%), Gaps = 16/476 (3%)
Query: 170 FVERLIYTYKDWGSDPHVFDIFFQVLVEAR----KLNEARKLFEKL-LNYGLVISVDSCN 224
F E ++++ +G +P V I + L++ + A + E L ++G + D +
Sbjct: 74 FAEDIVHSMPRFGCEPDV--ISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVS 131
Query: 225 LFLSRLSNTCDGLRMVVKSFTEFPELGICW--NTASYNIMIHCLCRFGKIKEAHLLLLQM 282
+ L N ++M+ + F + C N +Y+ I C+ G+++ A M
Sbjct: 132 F--NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 283 ELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKV 342
+ SP+VV+F+ +I+GYC G+L+ + L +EM+ + N TY +++ CK ++
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 343 VEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAI 402
AE + M+ + P++++YTT+IDGF + G+ A + +M + D+ Y I
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 403 ICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRL 462
I G C GK+ EA ++ +M L PD +++T +++ Y K+G MK A ++++ ++
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Query: 463 TPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVK 522
P+VV + + DG+ K+G+L +E + C + + N Y +++ LCK G+ ++ +
Sbjct: 370 EPDVVALSTMIDGIAKNGQL---HEAIVYFCIE--KANDVMYTVLIDALCKEGDFIEVER 424
Query: 523 LMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFC 582
L + AG PD F YT+ + CK G +V A +L M+ +GL ++ + L+ G
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 583 MSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGIT 638
G++ + ++ ML G+ P++A ++ LI+ + +M + + M +G+
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 173/366 (47%), Gaps = 4/366 (1%)
Query: 377 VAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTA 436
V A + +R + +PD T I + + + K ++ RG P + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 437 LIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEM-CRK 495
++ CK G +K A + ++M P+V++Y +L DG C++G++ +A+ +L +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 496 GL--QLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMV 553
G + +I ++NS+ NG K +L V + + + P+ TY+T +D +CKSGE+
Sbjct: 122 GFICKPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 554 KAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLI 613
A + M L P+VVTF L++G+C +G +E L K M + N TY LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 614 KQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFN 673
C + +M+ ++Y M + P+ Y ++ G + + A +M+ +G
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 674 LTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
L ++Y +I G K EA E+ E+M + LV D I+ ++ F+ G + + +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 734 CDAAIE 739
IE
Sbjct: 361 YHKLIE 366
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 586 MIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYN 645
M+ + + L + + P+ T N I Q N + K + ++G TP +++N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 646 ILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRG 705
++ CK +K A + M + G SYN+LI G + A + E +R
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 706 -GLVADREIYYF 716
G + +I F
Sbjct: 121 HGFICKPDIVSF 132
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 271/515 (52%), Gaps = 1/515 (0%)
Query: 196 VEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWN 255
+ + KL++A LF ++ + S+ N LS ++ +V+ + LGI N
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM-KKFDLVISLGEKMQRLGISHN 119
Query: 256 TASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIE 315
+YNI+I+C CR +I A LL +M G P +V+ S+++NGYC+ + + L++
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 316 EMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMG 375
+M G +P+ T+ +++ L +K EA ++ M+ +G P+ V Y +++G CK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 376 NVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYT 435
++ A+ L ++M I +++ Y+ +I C +A LF EM +G+ P+ I Y+
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 436 ALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRK 495
+LI C A L ++M+ ++ PNVVT+ AL D K G+L A +L EM ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 496 GLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKA 555
+ +I+TY+S++NG C + +A + E M P+ TY T+++ +CK+ + +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 556 HELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQ 615
EL R+M +GL + VT+ L++GF + ++ + + K M+ G+ PN TYN L+
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 616 HCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLT 675
C + +++ + + P TYNI+++G CKA +++ W L + KG
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 676 TSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
YN +I GF ++ EA LF +MR G + D
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 243/460 (52%), Gaps = 5/460 (1%)
Query: 186 HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VVKS 243
+ ++I +++ A L K++ G S+ + + S L+ C G R+ V
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS---SLLNGYCHGKRISDAVAL 177
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
+ E+G +T ++ +IH L K EA L+ +M RGC P++V++ ++NG C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
G++ L+ +M+ ++ N Y++V+ LCK +A + EM N+G+ P+ +
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y++LI C + A RL +M I P+++T+ A+I F GK+VEAEKL+ EM+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
R ++PD Y++LI+G+C + +A + M+ PNVVTY L +G CK+ ++
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
EL EM ++GL N TY ++++G +A + A + + M G HP+ TY T++
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLK 603
D CK+G++ KA + + ++P++ T+N+++ G C +G +EDG L + KG+K
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 604 PNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNT 643
P+ YN +I C + +++ M G PD T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 233/440 (52%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P + F+ +++ + + V+ L E+MQ G+ N YTYN ++ C+ S++ A +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G P V ++L++G+C ++ A L D+M + PD +T+T +I G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K EA L M+ RG +P+ + Y +++G CK G + AF+L N M ++ NVV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y+ + D LCK + A L EM KG++ N+ TY+S+++ LC A +L+ DM
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
+P+ T+ ++DA+ K G++V+A +L +M+ + + P + T++ L+NGFCM ++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+ + + + M+ K PN TYN LI C + ++++ M +G+ + TY L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
G +AR+ A + K+MV G + +YN L+ G K K +A +FE ++R +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 709 ADREIYYFFVDINFEEGNTE 728
Y ++ + G E
Sbjct: 503 PTIYTYNIMIEGMCKAGKVE 522
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 201/427 (47%), Gaps = 14/427 (3%)
Query: 288 SPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAET 347
+P + S + G CY G + Y ++R + K+ +A
Sbjct: 26 NPRIAPSSIDLCGMCYWG--------------RAFSSGSGDYREILRNGLHSMKLDDAIG 71
Query: 348 ILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFC 407
+ M+ +P + L+ KM L ++M+ L I +L TY +I FC
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 408 LTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVV 467
++ A L +M+ G EP + ++L++GYC + A +L + MV M P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
T+T L GL + A L+ M ++G Q N+ TY +VNGLCK G+I A L+ M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 528 EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMI 587
E A + Y+T++D+ CK A L +M +KG++P+V+T++ L++ C
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 588 EDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
D +LL M+E+ + PN T+N LI + K+Y M + I PD TY+ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 648 LQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGL 707
+ G C + EA + + M+ K +YN LI GF K K+ E ELF EM + GL
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 708 VADREIY 714
V + Y
Sbjct: 432 VGNTVTY 438
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFC----MSGMIEDGEKLLKWMLE 599
DA G MVK+ L PS+ FN L++ +I GEK+ +
Sbjct: 68 DAIGLFGGMVKSRPL----------PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL--- 114
Query: 600 KGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKE 659
G+ N TYN LI C R+ + + M G P T + LL G+C + + +
Sbjct: 115 -GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 660 AWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
A L +MV+ G+ T ++ LI G K EA L + M + G + Y V+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 720 INFEEGNTEITLELCD----AAIECYLVGKAT 747
+ G+ ++ L + A IE +V +T
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 254/537 (47%), Gaps = 41/537 (7%)
Query: 237 LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFST 296
+M++ + PE+ + + ++H L +F A L M G PDV ++
Sbjct: 179 FKMMITKVSLLPEV------RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 297 IINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
+I C L +L R ++I M+ G N YN ++ LCK KV EA I +++ +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
+ PD V Y TL+ G CK+ + DEM L P ++++ G GK+ EA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 417 KLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGL 476
L ++ G+ P+ VY ALID CK +A L + M + L PN VTY+ L D
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDT 536
C+ G+L+TA L EM GL+L++Y YNS++NG CK G+I A M +M P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 537 FTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKW 596
TYT++M YC G++ KA L +M KG+ PS+ TF L++G +G+I D KL
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD---------------- 640
M E +KPN TYN +I+ +C DM + K M +GI PD
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 641 -------------GN------TYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
GN Y LL G C+ ++EA + +EMVQ+G +L Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAI 738
LI G LK K L +EM GL D IY +D + G+ + + D I
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 273/538 (50%), Gaps = 42/538 (7%)
Query: 174 LIYTYKDWGSDPH--VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS 231
L+ D+G P+ V++ L + RK +EA LF+++ GL + + ++ +
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 232 NTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
L + E + G+ + YN +I+ C+FG I A + +M + P V
Sbjct: 414 RR-GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILRE 351
V++++++ GYC G++ + L+L EM KG+ P+ YT+ +++ L + + +A + E
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGK 411
M + P+ V Y +I+G+C+ G+++ A+ EM I+PD +Y +I G CLTG+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 412 MVEAEKLFHEMLGRG-LEPDEIVYTALIDGYCKAGGMKKAFSLHNNMV------------ 458
EA K+F + L +G E +EI YT L+ G+C+ G +++A S+ MV
Sbjct: 593 ASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 459 ----------------------HMR-LTPNVVTYTALADGLCKSGELETANELLHEMCRK 495
H R L P+ V YT++ D K+G+ + A + M +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 496 GLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG-EMVK 554
G N TY +++NGLCKAG + +A L M+ P+ TY +D K +M K
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
A EL +L KGL + T+N+L+ GFC G IE+ +L+ M+ G+ P+ TY +I
Sbjct: 772 AVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGF 672
+ C RND++ +++ M +GI PD YN L+ G C A M +A L EM+++G
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 250/514 (48%), Gaps = 46/514 (8%)
Query: 240 VVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIIN 299
+VK +F G+ N YN +I LC+ K EA LL +M G P+ V++S +I+
Sbjct: 354 LVKRVVDF---GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVP 359
+C G+L L + EM GLK + Y YNS++ CK + AE + EM+N+ + P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 360 DNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLF 419
V YT+L+ G+C G + A RL+ EM G I P + T+T ++ G G + +A KLF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 420 HEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTP--------------- 464
+EM ++P+ + Y +I+GYC+ G M KAF M + P
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 465 --------------------NVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTY 504
N + YT L G C+ G+LE A + EM ++G+ L++ Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 505 NSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLD 564
+++G K + L+++M G PD YT+++DA K+G+ +A + M++
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 565 KGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATY----NPLIKQHCLRN 620
+G P+ VT+ ++NG C +G + + E L M PN TY + L K
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV--- 767
Query: 621 DMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYN 680
DM+ +++ + +G+ + TYN+L++G C+ ++EA L M+ G + +Y
Sbjct: 768 DMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 681 ALIKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
+I +R +A EL+ M G+ DR Y
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 263/527 (49%), Gaps = 5/527 (0%)
Query: 195 LVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCD--GLRMVVKSFTEFPELGI 252
LV+ R A +LF +++ G+ V ++ + + C+ L + G
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDV---YIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 253 CWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLK 312
N YN++I LC+ K+ EA + + + PDVV++ T++ G C + E + L+
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 313 LIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFC 372
+++EM P+ +S+V L K K+ EA +++ +++ G+ P+ +Y LID C
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 373 KMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEI 432
K A LFD M + + P+ +TY+ +I FC GK+ A EM+ GL+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 433 VYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEM 492
Y +LI+G+CK G + A M++ +L P VVTYT+L G C G++ A L HEM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 493 CRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEM 552
KG+ +IYT+ ++++GL +AG I AVKL +M P+ TY +++ YC+ G+M
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 553 VKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPL 612
KA E L++M +KG+ P ++ L++G C++G + + + + + + N Y L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 613 IKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGF 672
+ C + + + M +G+ D Y +L+ G K ++ K + L KEM +G
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 673 NLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
Y ++I K + EA +++ M G V + Y ++
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Score = 222 bits (566), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 240/483 (49%), Gaps = 3/483 (0%)
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCS--PDVVSFSTIINGYCYLGELQRVLKLIEE 316
++++I R ++ + +L+ +M + S P+V + S +++G ++L +
Sbjct: 159 FDLLIQHYVRSRRVLDG-VLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 317 MQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGN 376
M G++P+ Y Y V+R LC+ + A+ ++ M G + V Y LIDG CK
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 377 VAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTA 436
V A + ++ G ++ PD++TY ++ G C + ++ EML P E ++
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 437 LIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKG 496
L++G K G +++A +L +V ++PN+ Y AL D LCK + A L M + G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 497 LQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAH 556
L+ N TY+ +++ C+ G + A+ + +M G + Y ++++ +CK G++ A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 557 ELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQH 616
+ +M++K L+P+VVT+ LM G+C G I +L M KG+ P+ T+ L+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 617 CLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTT 676
+R K++ M + P+ TYN++++G+C+ +M +A+ KEM +KG T
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 677 SSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDA 736
SY LI G + EA+ + + +G + Y + EG E L +C
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 737 AIE 739
++
Sbjct: 638 MVQ 640
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 192/384 (50%), Gaps = 11/384 (2%)
Query: 173 RLIYTYKDWGSDPH--VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL 230
+L +W P+ +++ + E +++A + +++ G+V S + L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 231 SNTCDGLRMVVKSFTEFPELGIC-WNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSP 289
T G K F + G C N Y ++H CR GK++EA + +M RG
Sbjct: 588 CLT--GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 290 DVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETIL 349
D+V + +I+G + + L++EM +GLKP+ Y S++ KT EA I
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
M+N+G VP+ V YT +I+G CK G V A L +M+ ++ +P+ +TY + LT
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL--DILT 763
Query: 410 GKMVEAEKL--FHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVV 467
V+ +K H + +GL + Y LI G+C+ G +++A L M+ ++P+ +
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
TYT + + LC+ +++ A EL + M KG++ + YN++++G C AG + +A +L +M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 528 EVAGFHPDTFTY--TTIMDAYCKS 549
G P+ T TT D KS
Sbjct: 884 LRQGLIPNNKTSRTTTSNDTSSKS 907
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 272/548 (49%), Gaps = 1/548 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KL++A LF ++ + S+ N LS ++ +V+ + L I +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKM-KKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
NI+I+C CR +I A LL +M G P +V+ S+++NGYC+ + + L+++M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G +P+ T+ +++ L +K EA ++ M+ +G P+ V Y +++G CK G+
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L ++M I D++ + II C + +A LF EM +G+ P+ + Y++LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
C G A L ++M+ ++ PN+VT+ AL D K G+ A +L +M ++ +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+I+TYNS+VNG C + +A ++ E M PD TY T++ +CKS + EL
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
R+M +GL VT+ L+ G G ++ +K+ K M+ G+ P+ TY+ L+ C
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+ +++ M I D Y +++G CKA + + W L + KG +Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
N +I G ++ EA L ++M+ G + + Y + + +G+ + EL
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 740 CYLVGKAT 747
C VG A+
Sbjct: 604 CRFVGDAS 611
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 223/393 (56%)
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
N +Y ++++ LC+ G A LL +ME DVV F+TII+ C + L L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKM 374
+EM+ KG++PN TY+S++ LC + +A +L +M+ + I P+ V + LID F K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 375 GNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVY 434
G A +L+D+M +I PD+ TY +++ GFC+ ++ +A+++F M+ + PD + Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
LI G+CK+ ++ L M H L + VTYT L GL G+ + A ++ +M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
G+ +I TY+ +++GLC G + +A+++ + M+ + D + YTT+++ CK+G++
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
+L + KG++P+VVT+N +++G C ++++ LLK M E G PN+ TYN LI+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
H D +A++ + M + D +T ++
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 207/441 (46%), Gaps = 14/441 (3%)
Query: 288 SPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAET 347
+P + S + G CY G + Y ++R K+ +A
Sbjct: 26 NPRIAPSSIDLCGMCYWG--------------RAFSSGSGDYREILRNGLHDMKLDDAIG 71
Query: 348 ILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFC 407
+ M+ +P V + L+ KM L ++M+ L I+ L TY +I FC
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 408 LTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVV 467
++ A L +M+ G EP + ++L++GYC + A +L + MV M P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
T+T L GL + A L+ M ++G Q N+ TY +VNGLCK G+ A+ L+ M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 528 EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMI 587
E A D + TI+D+ CK + A L ++M KG++P+VVT++ L++ C G
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 588 EDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
D +LL M+EK + PN T+N LI K+Y M + I PD TYN L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 648 LQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGL 707
+ G C + +A + + MV K +YN LIKGF K K+ + ELF EM GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 708 VADREIYYFFVDINFEEGNTE 728
V D Y + F +G+ +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCD 452
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 15/319 (4%)
Query: 162 DASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVIS 219
DAS + +E+ I +P++ F+ V+ K EA KL++ ++ +
Sbjct: 313 DASQLLSDMIEKKI--------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 220 VDSCNLFLSRLSNTCDGLRM-VVKSFTEFPELGICW-NTASYNIMIHCLCRFGKIKEAHL 277
+ + N S ++ C R+ K EF C+ + +YN +I C+ ++++
Sbjct: 365 IFTYN---SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 278 LLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLC 337
L +M RG D V+++T+I G + G+ K+ ++M G+ P+ TY+ ++ LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 338 KTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLL 397
K+ +A + M I D IYTT+I+G CK G V + LF + + P+++
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 398 TYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNM 457
TY +I G C + EA L +M G P+ Y LI + + G + L M
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 458 VHMRLTPNVVTYTALADGL 476
R + T +A+ L
Sbjct: 602 RSCRFVGDASTIGLVANML 620
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 260/525 (49%), Gaps = 1/525 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
K+ EA +FE++ Y +V S N +S L ++ K + + GI + S+
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS-GYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
I + C+ + A LL M +GC +VV++ T++ G+ +L +M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G+ T+N ++R+LCK V E E +L +++ +G++P+ Y I G C+ G +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A R+ + PD++TY +I G C K EAE +M+ GLEPD Y LI
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
GYCK G ++ A + + V P+ TY +L DGLC GE A L +E KG++
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
N+ YN+++ GL G IL+A +L +M G P+ T+ +++ CK G + A L+
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
+ M+ KG P + TFN+L++G+ +E+ ++L ML+ G+ P+ TYN L+ C
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+ + YK M +G P+ T+NILL+ C+ R + EA L +EM K N ++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEE 724
LI GF K A LF +M V+ Y + F E
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 253/496 (51%), Gaps = 36/496 (7%)
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
G+ +++N ++ LC+ G +KE LL ++ RG P++ +++ I G C GEL
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
++++ + +G KP+ TYN+++ LCK SK EAE L +M+N+G+ PD+ Y TLI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
+CK G V A R+ + +PD TY ++I G C G+ A LF+E LG+G++P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSG---------- 480
I+Y LI G G + +A L N M L P V T+ L +GLCK G
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 481 -------------------------ELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAG 515
++E A E+L M G+ ++YTYNS++NGLCK
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 516 NILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFN 575
++ + M G P+ FT+ ++++ C+ ++ +A LL +M +K + P VTF
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 576 VLMNGFCMSGMIEDGEKLLKWMLEK-GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCA 634
L++GFC +G ++ L + M E + + TYN +I + ++ K+++ M
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 635 QGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLE 694
+ + PDG TY +++ G CK N+ + EM++ GF + ++ +I + E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 695 ARELFEEMRRGGLVAD 710
A + M + GLV +
Sbjct: 691 AAGIIHRMVQKGLVPE 706
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 248/515 (48%), Gaps = 35/515 (6%)
Query: 268 RFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPY 327
R GK++EA + +M+ C P V S++ I++ G + K+ M+ +G+ P+ Y
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 328 TYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEM 387
++ ++ CKTS+ A +L M +QG + V Y T++ GF + A Y LF +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 388 RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGM 447
+ L T+ ++ C G + E EKL +++ RG+ P+ Y I G C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 448 KKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSI 507
A + ++ P+V+TY L GLCK+ + + A L +M +GL+ + YTYN++
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 508 VNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE---------------- 551
+ G CK G + A +++ D GF PD FTY +++D C GE
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 552 -------------------MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEK 592
+++A +L +M +KGL P V TFN+L+NG C G + D +
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 593 LLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHC 652
L+K M+ KG P+ T+N LI + + M +I M G+ PD TYN LL G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 653 KARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADRE 712
K ++ +K MV+KG ++N L++ + +K EA L EEM+ + D
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 713 IYYFFVDINFEEGNTEITLELCDAAIECYLVGKAT 747
+ +D + G+ + L E Y V +T
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 243/490 (49%), Gaps = 37/490 (7%)
Query: 188 FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEF 247
F+ +VL + + E KL +K++ G++ ++ + NLF+ L + L V+
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMVGCL 277
Query: 248 PELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGEL 307
E G + +YN +I+ LC+ K +EA + L +M G PD +++T+I GYC G +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 308 QRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTL 367
Q +++ + G P+ +TY S++ LC + A + E + +GI P+ ++Y TL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 368 IDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGL 427
I G G + A +L +EM +IP++ T+ ++ G C G + +A+ L M+ +G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 428 EPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANE 487
PD + LI GY M+ A + + M+ + P+V TY +L +GLCK+ + E E
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 488 LLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYC 547
M KG N++T+N ++ LC+ + +A+ L+E+M+ +PD T+ T++D +C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 548 KSGEMVKAHELLR------------------------------------DMLDKGLQPSV 571
K+G++ A+ L R +M+D+ L P
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 572 VTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKG 631
T+ ++++GFC +G + G K L M+E G P+ T +I C+ + + A I
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Query: 632 MCAQGITPDG 641
M +G+ P+
Sbjct: 698 MVQKGLVPEA 707
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 222/467 (47%), Gaps = 1/467 (0%)
Query: 249 ELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQM-ELRGCSPDVVSFSTIINGYCYLGEL 307
E+G ++Y +I L +GK + +L+ M E G + + Y G++
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV 92
Query: 308 QRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTL 367
Q + + E M +P ++YN+++ +L + +A + M ++GI PD +T
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 368 IDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGL 427
+ FCK AA RL + M +++ Y ++ GF E +LF +ML G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 428 EPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANE 487
+ L+ CK G +K+ L + ++ + PN+ TY GLC+ GEL+ A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 488 LLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYC 547
++ + +G + ++ TYN+++ GLCK +A + M G PD++TY T++ YC
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 548 KSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAA 607
K G + A ++ D + G P T+ L++G C G L L KG+KPN
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 608 TYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEM 667
YN LIK + + A++ M +G+ P+ T+NIL+ G CK + +A L K M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 668 VQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
+ KG+ ++N LI G+ + K A E+ + M G+ D Y
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 192/413 (46%), Gaps = 2/413 (0%)
Query: 309 RVLKLIEEMQIK-GLKPNPYTYNSVVRLLCKTSKVVEAETILREMM-NQGIVPDNVIYTT 366
+ L++ M+ + G K TY SV+ L K E +L +M N G +Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 367 LIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRG 426
+ + + G V A +F+ M + P + +Y AI+ +G +A K++ M RG
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 427 LEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETAN 486
+ PD +T + +CK A L NNM NVV Y + G +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 487 ELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAY 546
EL +M G+ L + T+N ++ LCK G++ + KL++ + G P+ FTY +
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 547 CKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNA 606
C+ GE+ A ++ ++++G +P V+T+N L+ G C + ++ E L M+ +GL+P++
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 607 ATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKE 666
TYN LI +C ++ +I G PD TY L+ G C A L E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 667 MVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
+ KG YN LIKG + LEA +L EM GL+ + + + V+
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 166/361 (45%), Gaps = 2/361 (0%)
Query: 380 AYRLFDEMRG-LNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGR-GLEPDEIVYTAL 437
A +F+ MR + L TY ++I GK E++ +M G E VY
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 438 IDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGL 497
+ Y + G +++A ++ M P V +Y A+ L SG + A+++ M +G+
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 498 QLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHE 557
++Y++ + CK A++L+ +M G + Y T++ + + + +E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 558 LLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHC 617
L ML G+ + TFN L+ C G +++ EKLL ++++G+ PN TYN I+ C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 618 LRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTS 677
R ++ ++ + QG PD TYN L+ G CK +EA +MV +G +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 678 SYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAA 737
+YN LI G+ K A + + G V D+ Y +D EG T L L + A
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 738 I 738
+
Sbjct: 383 L 383
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 147/302 (48%), Gaps = 13/302 (4%)
Query: 179 KDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLR 238
K + D F+I K+ A ++ + +L+ G+ V + N L+ L T
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK-FE 513
Query: 239 MVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTII 298
V++++ E G N ++NI++ LCR+ K+ EA LL +M+ + +PD V+F T+I
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 299 NGYCYLGELQRVLKLIEEMQ-IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGI 357
+G+C G+L L +M+ + + TYN ++ + V AE + +EM+++ +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 358 VPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEK 417
PD Y ++DGFCK GNV Y+ EM IP L T +I C+ ++ EA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 418 LFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTA---LAD 474
+ H M+ +GL P+ + +D KK + ++ L + +TY A L D
Sbjct: 694 IIHRMVQKGLVPEAVNTICDVD--------KKEVAAPKLVLEDLLKKSCITYYAYELLFD 745
Query: 475 GL 476
GL
Sbjct: 746 GL 747
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
Query: 482 LETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM-EVAGFHPDTFTYT 540
LE N + E+ G + + TY S++ L G +++ DM E G H Y
Sbjct: 24 LEMFNSMRKEV---GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 541 TIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEK 600
M Y + G++ +A + M +P+V ++N +M+ SG + K+ M ++
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 601 GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEA 660
G+ P+ ++ +K C + ++ M +QG + Y ++ G + E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 661 WFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDI 720
+ L +M+ G +L S++N L++ K+ E +L +++ + G++ + Y F+
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 721 NFEEGNTEITLELCDAAIE 739
+ G + + + IE
Sbjct: 261 LCQRGELDGAVRMVGCLIE 279
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 263 bits (672), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 236/447 (52%), Gaps = 3/447 (0%)
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
+I CR GK ++A +L +E G PDV++++ +I+GYC GE+ L +++ M +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
P+ TYN+++R LC + K+ +A +L M+ + PD + YT LI+ C+ V A
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGY 441
+L DEMR PD++TY ++ G C G++ EA K ++M G +P+ I + ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 442 CKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
C G A L +M+ +P+VVT+ L + LC+ G L A ++L +M + G Q N
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
+YN +++G CK + +A++ +E M G +PD TY T++ A CK G++ A E+L
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
+ KG P ++T+N +++G +G KLL M K LKP+ TY+ L+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
+ K + GI P+ T+N ++ G CK+R A M+ +G +SY
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLV 708
LI+G EA EL E+ GL+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 214/399 (53%), Gaps = 3/399 (0%)
Query: 330 NSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRG 389
N+ +R + +T ++ E L M+ G VPD + TTLI GFC++G A ++ + + G
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 390 LNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKK 449
+PD++TY +I G+C G++ A + M + PD + Y ++ C +G +K+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 450 AFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVN 509
A + + M+ P+V+TYT L + C+ + A +LL EM +G ++ TYN +VN
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 510 GLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQP 569
G+CK G + +A+K + DM +G P+ T+ I+ + C +G + A +LL DML KG P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 570 SVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIY 629
SVVTFN+L+N C G++ +L+ M + G +PN+ +YNPL+ C M +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 630 KGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKR 689
+ M ++G PD TYN +L CK +++A + ++ KG + +YN +I G K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 690 KKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE 728
K +A +L +EMR L D Y V EG +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 238/484 (49%), Gaps = 3/484 (0%)
Query: 266 LCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPN 325
+ R G+++E L M G PD++ +T+I G+C LG+ ++ K++E ++ G P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 326 PYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFD 385
TYN ++ CK ++ A ++L M + PD V Y T++ C G + A + D
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 386 EMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAG 445
M + PD++TYT +I C + A KL EM RG PD + Y L++G CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 446 GMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYN 505
+ +A N+M PNV+T+ + +C +G A +LL +M RKG ++ T+N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 506 SIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDK 565
++N LC+ G + +A+ ++E M G P++ +Y ++ +CK +M +A E L M+ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 566 GLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTT 625
G P +VT+N ++ C G +ED ++L + KG P TYN +I
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 626 AKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKG 685
K+ M A+ + PD TY+ L+ G + + EA E + G ++N+++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 686 FLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECYLVGK 745
K ++ A + M G + Y ++ EG + LEL + L+ K
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Query: 746 ATDE 749
++ E
Sbjct: 589 SSAE 592
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 243/500 (48%), Gaps = 50/500 (10%)
Query: 176 YTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLS---RLSN 232
+ +D S+ H + +V +L E K E ++ +G V + C + RL
Sbjct: 98 FALEDVESNNH-----LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGK 152
Query: 233 TCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVV 292
T R K G + +YN+MI C+ G+I A +L +M + SPDVV
Sbjct: 153 T----RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVV 205
Query: 293 SFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREM 352
+++TI+ C G+L++ +++++ M + P+ TY ++ C+ S V A +L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 353 MNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKM 412
++G PD V Y L++G CK G + A + ++M P+++T+ I+ C TG+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 413 VEAEKLFHEMLGRGL-----------------------------------EPDEIVYTAL 437
++AEKL +ML +G +P+ + Y L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 438 IDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGL 497
+ G+CK M +A MV P++VTY + LCK G++E A E+L+++ KG
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 498 QLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHE 557
+ TYN++++GL KAG +A+KL+++M PDT TY++++ + G++ +A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 558 LLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHC 617
+ G++P+ VTFN +M G C S + L +M+ +G KPN +Y LI+
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 618 LRNDMRTTAKIYKGMCAQGI 637
+ ++ +C +G+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 151 LIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLF 208
L+H F + +D +I ++ER++ G P + ++ L + K+ +A ++
Sbjct: 385 LLHGFCKEKKMDRAI---EYLERMV----SRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 209 EKLLNYGLVISVDSCNLFLSRLSNTCDGLRMV------VKSFTEFPELGICWNTASYNIM 262
+L + G C+ L + DGL +K E + +T +Y+ +
Sbjct: 438 NQLSSKG-------CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 263 IHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGL 322
+ L R GK+ EA + E G P+ V+F++I+ G C + R + + M +G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 323 KPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIV 358
KPN +Y ++ L EA +L E+ N+G++
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 271/529 (51%), Gaps = 11/529 (2%)
Query: 177 TYKDWGSDPHVFDIF-FQVLVEARKLN---EARKLF-EKLLNYGLVISVDSCNLFLSRLS 231
TY+ +D V + ++ +V A N EA ++F K+L G V+ DS ++ S L
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL--DS-HIGTSLLL 238
Query: 232 NTCDGL--RMVVKSFTEFPELGICW-NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCS 288
C GL R +K F + C N+ SY+I+IH LC G+++EA L QM +GC
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +++ +I C G + + L +EM +G KPN +TY ++ LC+ K+ EA +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
R+M+ I P + Y LI+G+CK G V A+ L M P++ T+ ++ G C
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
GK +A L ML GL PD + Y LIDG C+ G M A+ L ++M + P+ +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+TA+ + CK G+ + A+ L M RKG+ L+ T ++++G+CK G A+ ++E +
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
+ I+D K ++ + +L + GL PSVVT+ L++G SG I
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
++L+ M G PN Y +I C + K+ M G++P+ TY +++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARE 697
+G+ + A + MV++G+ L Y++L++GF+ +K ++ E
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 288/573 (50%), Gaps = 38/573 (6%)
Query: 188 FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEF 247
+ I L E +L EA L +++ G S + + + L CD ++ K+F F
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL---CDR-GLIDKAFNLF 324
Query: 248 PEL---GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYL 304
E+ G N +Y ++I LCR GKI+EA+ + +M P V++++ +INGYC
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 305 GELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIY 364
G + +L+ M+ + KPN T+N ++ LC+ K +A +L+ M++ G+ PD V Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 365 TTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLG 424
LIDG C+ G++ AY+L M +I PD LT+TAII FC GK A ML
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 425 RGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELET 484
+G+ DE+ T LIDG CK G + A + +V MR+ + + D L K +++
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 485 ANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMD 544
+L ++ + GL ++ TY ++V+GL ++G+I + +++E M+++G P+ + YT I++
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 545 AYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKP 604
C+ G + +A +LL M D G+ P+ VT+ V++ G+ +G ++ + ++ M+E+G +
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 605 NAATYNPLIK-----QHCLRNDMRTTAKIYK-------------------GMCAQGITPD 640
N Y+ L++ Q + N +T G C G+
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCI- 743
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
L+ CK E+ L + ++++G L + + +++ + +KK+ + EL
Sbjct: 744 -----FLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELIT 797
Query: 701 EMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
+ + G V + + + +EG+ E EL
Sbjct: 798 LVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 230/480 (47%), Gaps = 4/480 (0%)
Query: 244 FTEFPEL-GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
F E E+ G N Y+ ++ L + A++ +ME G ++ + TI+N C
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 303 YLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQ-GIVPDN 361
G + + ++ G + + S++ C+ + +A + M + P++
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 362 VIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHE 421
V Y+ LI G C++G + A+ L D+M P TYT +I C G + +A LF E
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 422 MLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGE 481
M+ RG +P+ YT LIDG C+ G +++A + MV R+ P+V+TY AL +G CK G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 482 LETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTT 541
+ A ELL M ++ + N+ T+N ++ GLC+ G +AV L++ M G PD +Y
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 542 IMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKG 601
++D C+ G M A++LL M ++P +TF ++N FC G + L ML KG
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 602 LKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAW 661
+ + T LI C R I + + I ++ N++L K +KE
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 662 FLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDIN 721
+ ++ + G + +Y L+ G ++ + + E M+ G + + +Y + + IN
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN--VYPYTIIIN 624
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 205/451 (45%), Gaps = 34/451 (7%)
Query: 174 LIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS 231
L+ + P+V F+ + L K +A L +++L+ GL + S N+ + L
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 232 NTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
+ K + I + ++ +I+ C+ GK A L M +G S D
Sbjct: 453 RE-GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILRE 351
V+ +T+I+G C +G+ + L ++E + + P++ N ++ +L K KV E +L +
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGK 411
+ G+VP V YTTL+DG + G++ ++R+ + M+ +P++ YT II G C G+
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 412 MVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTA 471
+ EAEKL M G+ P+ + YT ++ GY G + +A MV N Y++
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 472 LADGLCKSGE---------------LETANELLHEM---------CRKGLQLNIYTYNSI 507
L G S + ET E ++E+ C GL + + T
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR--- 748
Query: 508 VNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGL 567
LCK G ++ L++++ G + IM++YC + K EL+ +L G
Sbjct: 749 ---LCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGF 804
Query: 568 QPSVVTFNVLMNGFCMSGMIEDGEKLLKWML 598
PS +F +++ G G E +L+ +L
Sbjct: 805 VPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 466 VVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLME 525
++ Y + + LCK+G E A + ++ + G L+ + S++ G C+ N+ A+K+ +
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 526 DM-EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMS 584
M + P++ +Y+ ++ C+ G + +A L M +KG QPS T+ VL+ C
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 585 GMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
G+I+ L M+ +G KPN TY LI C + + + M I P TY
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 645 NILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRR 704
N L+ G+CK + A+ L M ++ ++N L++G + K +A L + M
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 705 GGLVADREIYYFFVDINFEEGNTEITLELCDAAIECY 741
GL D Y +D EG+ +L +++ C+
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLL-SSMNCF 470
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 277/557 (49%), Gaps = 39/557 (7%)
Query: 189 DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFP 248
+I L + K+++A LF ++ S+ N LS ++ + +V+ +
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM-NKFELVISLGEQMQ 110
Query: 249 ELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQ 308
LGI + +Y+I I+C CR ++ A +L +M G PD+V+ S+++NGYC+ +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 309 RVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLI 368
+ L+++M G KP+ +T+ +++ L +K EA ++ +M+ +G PD V Y T++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 369 DGFCKMGNVAAA----------------------------YR-------LFDEMRGLNII 393
+G CK G++ A YR LF EM I
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 394 PDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSL 453
P+++TY ++I C G+ +A +L ML + + P+ + + ALID + K G + +A L
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 454 HNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCK 513
H M+ + P+ +TY L +G C L+ A ++ M K NI TYN+++NG CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 514 AGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVT 573
+ V+L +M G +T TYTTI+ + ++G+ A + + M+ + ++T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 574 FNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMC 633
+++L++G C G ++ + K++ + ++ N YN +I+ C + ++ C
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---C 527
Query: 634 AQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYL 693
+ I PD TYN ++ G C R ++EA L ++M + G + +YN LI+ L+
Sbjct: 528 SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRA 587
Query: 694 EARELFEEMRRGGLVAD 710
+ EL +EMR G V D
Sbjct: 588 ASAELIKEMRSSGFVGD 604
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 232/426 (54%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +V F+ +++ + + + V+ L E+MQ G+ + YTY+ + C+ S++ A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G PD V ++L++G+C ++ A L D+M + PD T+T +I G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K EA L +M+ RG +PD + Y +++G CK G + A +L N M R+ NVV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+ + D LCK +E A +L EM KG++ N+ TYNS++N LC G A +L+ +M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
+P+ T+ ++DA+ K G++V+A +L +M+ + + P +T+N+L+NGFCM ++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+ +++ K+M+ K PN TYN LI C + ++++ M +G+ + TY ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
QG +A + A + K+MV +Y+ L+ G K A +F+ +++ +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 709 ADREIY 714
+ IY
Sbjct: 501 LNIFIY 506
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 248/501 (49%), Gaps = 43/501 (8%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VV 241
D + + IF +L+ A + K++ G + + + S L+ C R+ V
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS---SLLNGYCHSKRISDAV 173
Query: 242 KSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGY 301
+ E+G +T ++ +IH L K EA L+ QM RGC PD+V++ T++NG
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 302 CYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDN 361
C G++ L L+ +M+ +K N +N+++ LCK V A + EM +GI P+
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 362 VIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHE 421
V Y +LI+ C G + A RL M I P+++T+ A+I F GK+VEAEKL E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 422 MLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGE 481
M+ R ++PD I Y LI+G+C + +A + MV PN+ TY L +G CK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 482 LETANELLHEMCRKGLQLNIYTYNSIV--------------------------------- 508
+E EL EM ++GL N TY +I+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 509 --NGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKG 566
+GLC G + A+ + + ++ + + F Y T+++ CK+G++ +A +L +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---S 530
Query: 567 LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTA 626
++P VVT+N +++G C ++++ + L + M E G PN+ TYN LI+ + D +A
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 627 KIYKGMCAQGITPDGNTYNIL 647
++ K M + G D +T +++
Sbjct: 591 ELIKEMRSSGFVGDASTISLV 611
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 203/397 (51%), Gaps = 7/397 (1%)
Query: 341 KVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYT 400
KV +A + +M+ P V + L+ KM L ++M+ L I DL TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 401 AIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHM 460
I FC ++ A + +M+ G EPD + ++L++GYC + + A +L + MV M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 461 RLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQA 520
P+ T+T L GL + A L+ +M ++G Q ++ TY ++VNGLCK G+I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 521 VKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+ L+ ME A + + TI+D+ CK + A +L +M KG++P+VVT+N L+N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 581 FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD 640
C G D +LL MLEK + PN T+N LI + K+++ M + I PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
TYN+L+ G C + EA + K MV K +YN LI GF K K+ + ELF
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 701 EMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAA 737
EM + GLV + Y + F+ G+ CD+A
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGD-------CDSA 452
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 224/479 (46%), Gaps = 44/479 (9%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
D+ T L++ + + ++A + + Y D F L K +E
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-----PDTFTFTTLIHGLFLHNKASE 206
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMI 263
A L ++++ G + + ++ L D + + + + I N +N +I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDLALNLLNKMEAARIKANVVIFNTII 265
Query: 264 HCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLK 323
LC++ ++ A L +ME +G P+VV+++++IN C G +L+ M K +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
PN T+N+++ K K+VEAE + EM+ + I PD + Y LI+GFC + A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 384 FDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCK 443
F M + +P++ TY +I GFC ++ + +LF EM RGL + + YT +I G+ +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 444 AGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETA------------------ 485
AG A + MV R+ +++TY+ L GLC G+L+TA
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 486 -NELLHEMCRKG-------------LQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAG 531
N ++ MC+ G ++ ++ TYN++++GLC + +A L M+ G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 532 FHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDG 590
P++ TY T++ A + + + EL+++M G T +++ N M+ DG
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN------MLHDG 618
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 285/594 (47%), Gaps = 47/594 (7%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVIS---VDSCNLFLSRLSNTCDGLRMV 240
D H + + L++ R + A+ L +++++G+ I D C +S+ +G+
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK-----EGVMEK 365
Query: 241 VKS-FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIIN 299
K+ F G+ +Y +I CR +++ + LL++M+ R ++ T++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVP 359
G C G+L +++EM G +PN Y ++++ + S+ +A +L+EM QGI P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 360 DNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLF 419
D Y +LI G K + A EM + P+ TY A I G+ + A+K
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 420 HEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKS 479
EM G+ P++++ T LI+ YCK G + +A S + +MV + + TYT L +GL K+
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 480 GELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTY 539
+++ A E+ EM KG+ ++++Y ++NG K GN+ +A + ++M G P+ Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 540 TTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLE 599
++ +C+SGE+ KA ELL +M KGL P+ VT+ +++G+C SG + + +L M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 600 KGLKPNAATYNPLIKQHCLRNDMRTTAKIY---KGMCAQGITP----------------- 639
KGL P++ Y L+ C ND+ I+ K CA P
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 640 --------DGN----------TYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
DG+ TYNI++ CK N++ A L +M T +Y +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
L+ G+ K + E +F+E G+ D +Y ++ +EG T L L D
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 276/567 (48%), Gaps = 45/567 (7%)
Query: 185 PHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTC--DGLRMVVK 242
P+++D V+ + + +A+ LF+ ++ GL+ + + S + C +R +
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA---YASLIEGYCREKNVRQGYE 403
Query: 243 SFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
E + I + +Y ++ +C G + A+ ++ +M GC P+VV ++T+I +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 303 YLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNV 362
+++++EM+ +G+ P+ + YNS++ L K ++ EA + L EM+ G+ P+
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 363 IYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEA------- 415
Y I G+ + A+A + EMR ++P+ + T +I +C GK++EA
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 416 ----------------------------EKLFHEMLGRGLEPDEIVYTALIDGYCKAGGM 447
E++F EM G+G+ PD Y LI+G+ K G M
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 448 KKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSI 507
+KA S+ + MV LTPNV+ Y L G C+SGE+E A ELL EM KGL N TY +I
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 508 VNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGL 567
++G CK+G++ +A +L ++M++ G PD+F YTT++D C+ ++ +A + KG
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGC 762
Query: 568 QPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL----KPNAATYNPLIKQHCLRNDMR 623
S FN L+N G E ++L +++ KPN TYN +I C ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 624 TTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALI 683
+++ M + P TY LL G+ K E + + E + G Y+ +I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 684 KGFLKRKKYLEARELFEEMRRGGLVAD 710
FLK +A L ++M V D
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDD 909
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 272/556 (48%), Gaps = 14/556 (2%)
Query: 186 HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVKS 243
+ +D+ L + ++L +A+ L ++ + G+ + + +L + L D + +V
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH- 336
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
E GI Y+ I + + G +++A L M G P +++++I GYC
Sbjct: 337 --EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
+++ +L+ EM+ + + +PYTY +VV+ +C + + A I++EM+ G P+ VI
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
YTTLI F + A R+ EM+ I PD+ Y ++I G +M EA EM+
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
GL+P+ Y A I GY +A A M + PN V T L + CK G++
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A M +G+ + TY ++NGL K + A ++ +M G PD F+Y ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLK 603
+ + K G M KA + +M+++GL P+V+ +N+L+ GFC SG IE ++LL M KGL
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 604 PNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFL 663
PNA TY +I +C D+ +++ M +G+ PD Y L+ G C+ +++ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 664 HKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADR------EIYYFF 717
+KG +T+ +NALI K K E+ + G DR Y
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF--DRFGKPNDVTYNIM 811
Query: 718 VDINFEEGNTEITLEL 733
+D +EGN E EL
Sbjct: 812 IDYLCKEGNLEAAKEL 827
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/597 (27%), Positives = 272/597 (45%), Gaps = 29/597 (4%)
Query: 143 KDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLN 202
K L +I W + +SI R + D +F I F + +
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIV------RCSQEFVGKSDDGVLFGILFDGYIAKGYIE 168
Query: 203 EARKLFEKLLNYGLVISVDSCNLFLSRLS--NTCDGLRMVVKSFTEFPELGICWNTASYN 260
EA +F + LV + C + L L N D V K E + ++ +Y+
Sbjct: 169 EAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE---RNVVFDVKTYH 225
Query: 261 IMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIK 320
++I CR G ++ +L + E + + + ++G LKL E M K
Sbjct: 226 MLIIAHCRAGNVQLGKDVLFKTE-----KEFRTATLNVDG---------ALKLKESMICK 271
Query: 321 GLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAA 380
GL P YTY+ ++ LCK ++ +A+++L EM + G+ DN Y+ LIDG K N AA
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 381 YRLFDEM--RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALI 438
L EM G+NI P + Y IC G M +A+ LF M+ GL P Y +LI
Sbjct: 332 KGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 439 DGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQ 498
+GYC+ +++ + L M + + TY + G+C SG+L+ A ++ EM G +
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 499 LNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHEL 558
N+ Y +++ + A++++++M+ G PD F Y +++ K+ M +A
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 559 LRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCL 618
L +M++ GL+P+ T+ ++G+ + +K +K M E G+ PN LI ++C
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 619 RNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS 678
+ + Y+ M QGI D TY +L+ G K + +A + +EM KG S
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
Y LI GF K +A +F+EM GL + IY + G E EL D
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 262/552 (47%), Gaps = 64/552 (11%)
Query: 135 VVQISVAAKDLKTAHGLIHDFWA---KPNLDASIAFTHFVE------------RLIYTYK 179
VV+ ++ DL A+ ++ + A +PN+ + +T ++ R++ K
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNV---VIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 180 DWGSDPHVF--DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGL 237
+ G P +F + L +A++++EAR +++ GL + + F+S +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE-F 538
Query: 238 RMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTI 297
K E E G+ N +I+ C+ GK+ EA M +G D +++ +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 298 INGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGI 357
+NG ++ ++ EM+ KG+ P+ ++Y ++ K + +A +I EM+ +G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 358 VPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEK 417
P+ +IY L+ GFC+ G + A L DEM + P+ +TY II G+C +G + EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 418 LFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLH--------------NNMVHM--- 460
LF EM +GL PD VYT L+DG C+ +++A ++ N +++
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 461 ------------RL---------TPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
RL PN VTY + D LCK G LE A EL H+M L
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+ TY S++NG K G + + ++ AG PD Y+ I++A+ K G KA L+
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 560 RDM-----LDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
M +D G + S+ T L++GF G +E EK+++ M+ P++AT LI
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Query: 615 QHCLRNDMRTTA 626
+ C+ ++ R A
Sbjct: 959 ESCISSNQRVEA 970
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
+++ LA LC G E A ++ M + + ++SIV C
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPV-AEVWSSIVR--CS-------------Q 142
Query: 528 EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMI 587
E G D + + D Y G + +A + + L P + VL++ +
Sbjct: 143 EFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 588 EDGEKLLKWMLEKGLKPNAATYNPLIKQHC--------------LRNDMRTTA------- 626
+ + K M+E+ + + TY+ LI HC + RT
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 627 KIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGF 686
K+ + M +G+ P TY++L+ G CK + +++A L EM G +L +Y+ LI G
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 687 LKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECYLVGKA 746
LK + A+ L EM G+ +Y + + +EG E L D I L+ +A
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/562 (29%), Positives = 288/562 (51%), Gaps = 23/562 (4%)
Query: 172 ERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLS 231
E L +++ W S V+D+ + R ++++ + +K+ + L +S S N L
Sbjct: 153 ELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 212
Query: 232 NTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
T D + V K + N +Y+ ++ LCR K+++A L L E + P V
Sbjct: 213 ET-DKMWDVYKEIKDK-------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 264
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILRE 351
VSF++I++GYC LG + + GL P+ Y++N ++ LC + EA + +
Sbjct: 265 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 324
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGK 411
M G+ PD+V Y L GF +G ++ A+ + +M + PD++TYT ++CG C G
Sbjct: 325 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 384
Query: 412 MVEAEKLFHEMLGRGLEPDEIV-YTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYT 470
+ L +ML RG E + I+ + ++ G CK G + +A SL N M L+P++V Y+
Sbjct: 385 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 444
Query: 471 ALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVA 530
+ GLCK G+ + A L EMC K + N T+ +++ GLC+ G +L+A L++ + +
Sbjct: 445 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 504
Query: 531 GFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDG 590
G D Y ++D Y KSG + +A EL + +++ G+ PSV TFN L+ G+C + I +
Sbjct: 505 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564
Query: 591 EKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQG 650
K+L + GL P+ +Y L+ + + ++ ++ + M A+GI P TY+++ +G
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 624
Query: 651 HCKARN-------MKEAWFLH-----KEMVQKGFNLTTSSYNALIKGFLKRKKYLEAREL 698
C+ ++E F ++M +G +YN +I+ +L R K+L +
Sbjct: 625 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ-YLCRVKHLSGAFV 683
Query: 699 FEE-MRRGGLVADREIYYFFVD 719
F E M+ L A Y +D
Sbjct: 684 FLEIMKSRNLDASSATYNILID 705
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 267/556 (48%), Gaps = 28/556 (5%)
Query: 178 YKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGL 237
+KD G F+ + ++ A+ F +L GLV SV S N+ ++ L
Sbjct: 257 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC------ 310
Query: 238 RMVVKSFTEFPEL-------GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPD 290
+V S E EL G+ ++ +YNI+ G I A ++ M +G SPD
Sbjct: 311 --LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 368
Query: 291 VVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSV-VRLLCKTSKVVEAETIL 349
V++++ ++ G C LG + L L+++M +G + N SV + LCKT ++ EA ++
Sbjct: 369 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 428
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
+M G+ PD V Y+ +I G CK+G A L+DEM I+P+ T+ A++ G C
Sbjct: 429 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 488
Query: 410 GKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTY 469
G ++EA L ++ G D ++Y +IDGY K+G +++A L ++ +TP+V T+
Sbjct: 489 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 548
Query: 470 TALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEV 529
+L G CK+ + A ++L + GL ++ +Y ++++ GN +L +M+
Sbjct: 549 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 608
Query: 530 AGFHPDTFTYTTIMDAYCKSGE------------MVKAHELLRDMLDKGLQPSVVTFNVL 577
G P TY+ I C+ + K + LRDM +G+ P +T+N +
Sbjct: 609 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 668
Query: 578 MNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGI 637
+ C + L+ M + L ++ATYN LI C+ +R + Q +
Sbjct: 669 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 728
Query: 638 TPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARE 697
+ Y L++ HC + + A L +++ +GFN++ Y+A+I +R E++
Sbjct: 729 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKF 788
Query: 698 LFEEMRRGGLVADREI 713
F M G+ D +I
Sbjct: 789 FFCLMLSQGISPDLDI 804
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 216/424 (50%), Gaps = 8/424 (1%)
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
L ++++M+ + L + +YNSV+ +T K+ + + +E+ ++ + Y+T++DG
Sbjct: 186 LYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKDK----NEHTYSTVVDG 238
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
C+ + A +I P ++++ +I+ G+C G + A+ F +L GL P
Sbjct: 239 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 298
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
+ LI+G C G + +A L ++M + P+ VTY LA G G + A E++
Sbjct: 299 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 358
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM-DAYCKS 549
+M KGL ++ TY ++ G C+ GNI + L++DM GF ++ ++M CK+
Sbjct: 359 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 418
Query: 550 GEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATY 609
G + +A L M GL P +V ++++++G C G + L M +K + PN+ T+
Sbjct: 419 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 478
Query: 610 NPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQ 669
L+ C + + + + + G T D YNI++ G+ K+ ++EA L K +++
Sbjct: 479 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 538
Query: 670 KGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEI 729
G + +++N+LI G+ K + EAR++ + ++ GL Y +D GNT+
Sbjct: 539 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 598
Query: 730 TLEL 733
EL
Sbjct: 599 IDEL 602
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 193/391 (49%), Gaps = 13/391 (3%)
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
R+ + G+V D +++ + ++ V + + +M+ N+ +Y +++ F T
Sbjct: 160 RKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET 214
Query: 410 GKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTY 469
KM + K + +E Y+ ++DG C+ ++ A + P+VV++
Sbjct: 215 DKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 267
Query: 470 TALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEV 529
++ G CK G ++ A + + GL ++Y++N ++NGLC G+I +A++L DM
Sbjct: 268 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 327
Query: 530 AGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIED 589
G PD+ TY + + G + A E++RDMLDKGL P V+T+ +L+ G C G I+
Sbjct: 328 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 387
Query: 590 GEKLLKWMLEKGLKPNAAT-YNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
G LLK ML +G + N+ + ++ C + ++ M A G++PD Y+I++
Sbjct: 388 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 447
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
G CK A +L+ EM K + ++ AL+ G ++ LEAR L + + G
Sbjct: 448 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 507
Query: 709 ADREIYYFFVDINFEEGNTEITLELCDAAIE 739
D +Y +D + G E LEL IE
Sbjct: 508 LDIVLYNIVIDGYAKSGCIEEALELFKVVIE 538
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 257/500 (51%), Gaps = 18/500 (3%)
Query: 188 FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFL------SRLSNTC------- 234
F+I + + KL+ + F KL G V + N L R+S
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 235 -DGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVS 293
G V F + E+G+ ++N +I+ LC G++ EA L+ +M +G DVV+
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
+ TI+NG C +G+ + L L+ +M+ +KP+ Y++++ LCK +A+ + EM+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
+GI P+ Y +IDGFC G + A RL +M I PD+LT+ A+I GK+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
EAEKL EML R + PD + Y ++I G+CK A +M + +P+VVT+ +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTII 439
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
D C++ ++ +LL E+ R+GL N TYN++++G C+ N+ A L ++M G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
PDT T ++ +C++ ++ +A EL + + V +N++++G C +++ L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
+ G++P+ TYN +I C ++ + ++ M G PD +TYN L++G K
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 654 ARNMKEAWFLHKEMVQKGFN 673
A + ++ L EM GF+
Sbjct: 620 AGEIDKSIELISEMRSNGFS 639
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 249/497 (50%), Gaps = 19/497 (3%)
Query: 252 ICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVL 311
I N S+NI+I C C K+ + ++ G PDVV+F+T+++G C + L
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 312 KLI---------------EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
L ++M GL P T+N+++ LC +V+EA ++ +M+ +G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
+ D V Y T+++G CKMG+ +A L +M +I PD++ Y+AII C G +A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 417 KLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGL 476
LF EML +G+ P+ Y +IDG+C G A L +M+ + P+V+T+ AL
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDT 536
K G+L A +L EM + + + TYNS++ G CK N K M D+ + PD
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH-NRFDDAKHMFDLMAS---PDV 432
Query: 537 FTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKW 596
T+ TI+D YC++ + + +LLR++ +GL + T+N L++GFC + + L +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARN 656
M+ G+ P+ T N L+ C + ++++ + I D YNI++ G CK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 657 MKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYF 716
+ EAW L + G +YN +I GF + +A LF +M+ G D Y
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 717 FVDINFEEGNTEITLEL 733
+ + G + ++EL
Sbjct: 613 LIRGCLKAGEIDKSIEL 629
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 289/593 (48%), Gaps = 33/593 (5%)
Query: 135 VVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFV--ERLIYTYKDWGSDPHVFDIFF 192
+ Q++ ++LK G H F +LD +I F ++ R YT D VF
Sbjct: 65 LTQVTFEGEELKLKSG-SHYF---KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVF---- 116
Query: 193 QVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGI 252
V + + A L+ K+ + +++ S N+ + + C L + +F + +LG
Sbjct: 117 ---VRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD-CHKLSFSLSTFGKLTKLGF 172
Query: 253 CWNTASYNIMIHCLCRFGKIKEAHLLL---------------LQMELRGCSPDVVSFSTI 297
+ ++N ++H LC +I EA L QM G +P V++F+T+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 298 INGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGI 357
ING C G + L+ +M KGL + TY ++V +CK A +L +M I
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 358 VPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEK 417
PD VIY+ +ID CK G+ + A LF EM I P++ TY +I GFC G+ +A++
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 418 LFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLC 477
L +M+ R + PD + + ALI K G + +A L + M+H + P+ VTY ++ G C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 478 KSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTF 537
K + A + M ++ T+N+I++ C+A + + ++L+ ++ G +T
Sbjct: 413 KHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 538 TYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWM 597
TY T++ +C+ + A +L ++M+ G+ P +T N+L+ GFC + +E+ +L + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 598 LEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNM 657
+ + YN +I C + + ++ + G+ PD TYN+++ G C +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 658 KEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
+A L +M G S+YN LI+G LK + ++ EL EMR G D
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 227/478 (47%), Gaps = 21/478 (4%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIA-FTHFVER-------LIYTYKDWGSDPHVFDIFFQVL 195
D+ T + L+H + + ++A F + VE L + G P V I F L
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV--ITFNTL 232
Query: 196 V-----EARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPEL 250
+ E R L EA L K++ GL I V + ++ + D + + ++ E
Sbjct: 233 INGLCLEGRVL-EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD-TKSALNLLSKMEET 290
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
I + Y+ +I LC+ G +A L +M +G +P+V +++ +I+G+C G
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
+L+ +M + + P+ T+N+++ K K+ EAE + EM+++ I PD V Y ++I G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
FCK A +FD M PD++T+ II +C ++ E +L E+ RGL +
Sbjct: 411 FCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
Y LI G+C+ + A L M+ + P+ +T L G C++ +LE A EL
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG 550
+ + L+ YN I++G+CK + +A L + + G PD TY ++ +C
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 551 EMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAAT 608
+ A+ L M D G +P T+N L+ G +G I+ +L+ M G +A T
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 164/332 (49%), Gaps = 31/332 (9%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F+E E GI N +YN MI C FG+ +A LL M R +PDV++F+ +I+
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNS-------------------------------V 332
G+L KL +EM + + P+ TYNS +
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 333 VRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNI 392
+ + C+ +V E +LRE+ +G+V + Y TLI GFC++ N+ AA LF EM +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 393 IPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFS 452
PD +T ++ GFC K+ EA +LF + ++ D + Y +I G CK + +A+
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 453 LHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLC 512
L ++ + P+V TY + G C + AN L H+M G + + TYN+++ G
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 513 KAGNILQAVKLMEDMEVAGFHPDTFTYTTIMD 544
KAG I ++++L+ +M GF D FT + D
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 20/286 (6%)
Query: 450 AFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVN 509
A SL+ M R+ N+ ++ L C +L + ++ + G Q ++ T+N++++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 510 GLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQP 569
GLC I +A+ L M GF ++A L M++ GL P
Sbjct: 185 GLCLEDRISEALALFGYMVETGF--------------------LEAVALFDQMVEIGLTP 224
Query: 570 SVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIY 629
V+TFN L+NG C+ G + + L+ M+ KGL + TY ++ C D ++ +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 630 KGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKR 689
M I PD Y+ ++ CK + +A +L EM++KG +YN +I GF
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 690 KKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
++ +A+ L +M + D + + + +EG +LCD
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 147 TAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVF--DIFFQVLVEARKLNEA 204
T + LIH F NL+A+ + L G P +I E KL EA
Sbjct: 469 TYNTLIHGFCEVDNLNAA-------QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 205 RKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VVKSFTEFPELGICWNTASYNIM 262
+LFE + + + + N+ + + C G ++ F P G+ + +YN+M
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGM---CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 263 IHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGL 322
I C I +A++L +M+ G PD +++T+I G GE+ + ++LI EM+ G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 323 KPNPYTYNSVVRLL 336
+ +T V L+
Sbjct: 639 SGDAFTIKMVADLI 652
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
A L R M + + ++ +FN+L+ FC + + + G +P+ T+N L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNL 674
CL + + ++ M G EA L +MV+ G
Sbjct: 185 GLCLEDRISEALALFGYMVETGFL--------------------EAVALFDQMVEIGLTP 224
Query: 675 TTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELC 734
++N LI G + LEA L +M GL D Y V+ + G+T+ L L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 735 DAAIECYL 742
E ++
Sbjct: 285 SKMEETHI 292
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 255/497 (51%), Gaps = 24/497 (4%)
Query: 259 YNIMIHCLCRFGKIKEAHLLLL------QMELRGCSPDVVSFSTIINGYCYLGELQRVLK 312
YNI+I +C LL L +M G + ++ S+ C G+ ++
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 313 LIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFC 372
+I EM +G P+ TY+ V+ LC SK+ A + EM G+V D YT ++D FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 373 KMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEI 432
K G + A + F+EMR + P+++TYTA+I + K+ A +LF ML G P+ +
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 433 VYTALIDGYCKAGGMKKAFSLHNNM--------VHMRLT--------PNVVTYTALADGL 476
Y+ALIDG+CKAG ++KA + M V M PNVVTY AL DG
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDT 536
CKS +E A +LL M +G + N Y+++++GLCK G + +A ++ +M GF
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 537 FTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKW 596
+TY++++D Y K A ++L ML+ P+VV + +++G C G ++ KL++
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARN 656
M EKG +PN TY +I + + T ++ + M ++G+ P+ TY +L+ CK
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 657 MKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYF 716
+ A L +EM Q + T+ Y +I+GF K+++E+ L +E+ + +Y
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 887
Query: 717 FVDINFEEGNTEITLEL 733
+D + E+ L L
Sbjct: 888 LIDNLIKAQRLEMALRL 904
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 287/608 (47%), Gaps = 58/608 (9%)
Query: 185 PHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL-----SNTCDGLRM 239
P +F+ + + A KL +K++ G + N+ + + S CD L +
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 240 VVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIIN 299
K+++E G+ N + + CLC GK ++A ++ +M +G PD ++S ++N
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVP 359
C +++ L EEM+ GL + YTY +V CK + +A EM G P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 360 DNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLF 419
+ V YT LI + K V+ A LF+ M +P+++TY+A+I G C G++ +A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 420 HEMLGRGLEPDE----------------IVYTALIDGYCKAGGMKKAFSLHNNMVHMRLT 463
M G PD + Y AL+DG+CK+ +++A L + M
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 464 PNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKL 523
PN + Y AL DGLCK G+L+ A E+ EM G +YTY+S+++ K A K+
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 524 MEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCM 583
+ M P+ YT ++D CK G+ +A++L++ M +KG QP+VVT+ +++GF M
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 584 SGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRN-----------DMRTT------- 625
G IE +LL+ M KG+ PN TY LI HC +N +M+ T
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 626 --AKIYKGMCAQGITPDG--------------NTYNILLQGHCKARNMKEAWFLHKEMVQ 669
K+ +G + I G + Y +L+ KA+ ++ A L +E+
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 670 KGFNLT--TSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNT 727
L +S+YN+LI+ K A +LF EM + G++ + + + + F
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 728 EITLELCD 735
L L D
Sbjct: 971 SEALLLLD 978
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 240/499 (48%), Gaps = 23/499 (4%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGL-RMVVK 242
D + L A K+ A LFE++ GLV V + + + GL K
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA--GLIEQARK 539
Query: 243 SFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
F E E+G N +Y +IH + K+ A+ L M GC P++V++S +I+G+C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 303 YLGELQRVLKLIEEM----------------QIKGLKPNPYTYNSVVRLLCKTSKVVEAE 346
G++++ ++ E M +PN TY +++ CK+ +V EA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 347 TILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGF 406
+L M +G P+ ++Y LIDG CK+G + A + EM L TY+++I +
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 407 CLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNV 466
+ A K+ +ML P+ ++YT +IDG CK G +A+ L M PNV
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 467 VTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMED 526
VTYTA+ DG G++ET ELL M KG+ N TY +++ CK G + A L+E+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 527 MEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGM 586
M+ + T Y +++ + K E +++ LL ++ P + + +L++ +
Sbjct: 840 MKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 897
Query: 587 IEDGEKLLKWM--LEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
+E +LL+ + L ++TYN LI+ CL N + T +++ M +G+ P+ ++
Sbjct: 898 LEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
Query: 645 NILLQGHCKARNMKEAWFL 663
L++G + + EA L
Sbjct: 958 CSLIKGLFRNSKISEALLL 976
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 234/538 (43%), Gaps = 62/538 (11%)
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
N+++ CR G A L +++ P +++ +I + L + EM +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
L+ + +T LCK K EA T++ + VPD V YT LI G C+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV-EAEKLFHEMLGRGLEPDEIVYTALI 438
A + MR + +P+++TY+ ++CG CL K + +++ + M+ G P ++ +L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 439 DGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYT---------------------------A 471
YC +G A+ L MV P V Y
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 472 LADG--------------LCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNI 517
LA G LC +G+ E A ++ EM +G + TY+ ++N LC A +
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 518 LQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVL 577
A L E+M+ G D +TYT ++D++CK+G + +A + +M + G P+VVT+ L
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 578 MNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGI 637
++ + + + +L + ML +G PN TY+ LI HC + +I++ MC
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 638 TPDGN----------------TYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
PD + TY LL G CK+ ++EA L M +G Y+A
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
LI G K K EA+E+ EM G A Y +D F+ ++ ++ +E
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 213/444 (47%), Gaps = 33/444 (7%)
Query: 179 KDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNYGLVISV---------------- 220
++ G P+V + ++A+K++ A +LFE +L+ G + ++
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 221 -DSCNLFLSRLSNTCD--GLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHL 277
+C +F R+ + D + M K + + E N +Y ++ C+ +++EA
Sbjct: 605 EKACQIF-ERMCGSKDVPDVDMYFKQYDDNSERP---NVVTYGALLDGFCKSHRVEEARK 660
Query: 278 LLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLC 337
LL M + GC P+ + + +I+G C +G+L ++ EM G YTY+S++
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 338 KTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLL 397
K + A +L +M+ P+ VIYT +IDG CK+G AY+L M P+++
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 398 TYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNM 457
TYTA+I GF + GK+ +L M +G+ P+ + Y LID CK G + A +L M
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 458 VHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNI 517
+ Y + +G K E + LL E+ + + Y +++ L KA +
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 518 LQAVKLMEDMEVAGFHPD----TFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVT 573
A++L+E EVA F + TY +++++ C + ++ A +L +M KG+ P + +
Sbjct: 899 EMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 574 FNVLMNGFCMSGMIEDGEKLLKWM 597
F L+ G + I + LL ++
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFI 980
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 38/316 (12%)
Query: 182 GSDPH--VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM 239
G +P+ V+D L + KL+EA+++ ++ +G ++ + + + R +
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV-KRQDL 727
Query: 240 VVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIIN 299
K ++ E N Y MI LC+ GK EA+ L+ ME +GC P+VV+++ +I+
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMN----- 354
G+ +G+++ L+L+E M KG+ PN TY ++ CK + A +L EM
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 355 ----------------------------QGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDE 386
P +Y LID K + A RL +E
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 387 MRGLN--IIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKA 444
+ + ++ TY ++I CL K+ A +LF EM +G+ P+ + +LI G +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 445 GGMKKAFSLHNNMVHM 460
+ +A L + + HM
Sbjct: 968 SKISEALLLLDFISHM 983
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 262/523 (50%), Gaps = 36/523 (6%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
K ++A LF++++ + S+ + F S ++ T +V+ + GI N +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIART-KQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 260 NIMIHCLCRF-----------------------------------GKIKEAHLLLLQMEL 284
NIMI+C CR GK+ EA +L+ +M
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 285 RGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVE 344
GC PDVV++++I+NG C G+ L L+ +M+ + +K + +TY++++ LC+ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 345 AETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIIC 404
A ++ +EM +GI V Y +L+ G CK G L +M I+P+++T+ ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 405 GFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTP 464
F GK+ EA +L+ EM+ RG+ P+ I Y L+DGYC + +A ++ + MV + +P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 465 NVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLM 524
++VT+T+L G C ++ ++ + ++GL N TY+ +V G C++G I A +L
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 525 EDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMS 584
++M G PD TY ++D C +G++ KA E+ D+ + +V + ++ G C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 585 GMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
G +ED L + KG+KPN TY +I C + + + + M G P+ TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 645 NILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFL 687
N L++ H + ++ + L +EM GF+ SS +I L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 234/467 (50%)
Query: 281 QMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTS 340
Q+EL G + ++ + + +IN +C + ++ ++ G +P+ T+N++++ L
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 341 KVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYT 400
KV EA ++ M+ G PD V Y ++++G C+ G+ + A L +M N+ D+ TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 401 AIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHM 460
II C G + A LF EM +G++ + Y +L+ G CKAG L +MV
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 461 RLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQA 520
+ PNV+T+ L D K G+L+ ANEL EM +G+ NI TYN++++G C + +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 521 VKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+++ M PD T+T+++ YC + ++ R++ +GL + VT+++L+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 581 FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD 640
FC SG I+ E+L + M+ G+ P+ TY L+ C + +I++ + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
Y +++G CK +++AW L + KG +Y +I G K+ EA L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 701 EMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECYLVGKAT 747
+M G + Y + + +G+ + +L + C A+
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 35/419 (8%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +V FS + + VL +++++ G+ N YT N
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN------------------ 127
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+I+ FC+ AY + ++ L PD T+ +I G L
Sbjct: 128 -----------------IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL 170
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
GK+ EA L M+ G +PD + Y ++++G C++G A L M + +V T
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y+ + D LC+ G ++ A L EM KG++ ++ TYNS+V GLCKAG L++DM
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
P+ T+ ++D + K G++ +A+EL ++M+ +G+ P+++T+N LM+G+CM +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+ +L M+ P+ T+ LIK +C+ + K+++ + +G+ + TY+IL+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGL 707
QG C++ +K A L +EMV G +Y L+ G K +A E+FE++++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 200/390 (51%)
Query: 344 EAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAII 403
+A + +EM+ +P V ++ + ++ I ++ T +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 404 CGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLT 463
FC K A + +++ G EPD + LI G G + +A L + MV
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 464 PNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKL 523
P+VVTY ++ +G+C+SG+ A +LL +M + ++ +++TY++I++ LC+ G I A+ L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 524 MEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCM 583
++ME G TY +++ CK+G+ LL+DM+ + + P+V+TFNVL++ F
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 584 SGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNT 643
G +++ +L K M+ +G+ PN TYN L+ +C++N + + M +PD T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 644 YNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMR 703
+ L++G+C + + + + + + ++G +Y+ L++GF + K A ELF+EM
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 704 RGGLVADREIYYFFVDINFEEGNTEITLEL 733
G++ D Y +D + G E LE+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 183/368 (49%), Gaps = 6/368 (1%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNE 203
D+ T +I +DA+I+ +E K S ++ + L +A K N+
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMET-----KGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMI 263
L + +++ +V +V + N+ L L+ + + E GI N +YN ++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKE-GKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 264 HCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLK 323
C ++ EA+ +L M CSPD+V+F+++I GYC + + +K+ + +GL
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
N TY+ +V+ C++ K+ AE + +EM++ G++PD + Y L+DG C G + A +
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 384 FDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCK 443
F++++ + ++ YT II G C GK+ +A LF + +G++P+ + YT +I G CK
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 444 AGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYT 503
G + +A L M PN TY L + G+L + +L+ EM G + +
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 504 YNSIVNGL 511
+++ L
Sbjct: 581 IKMVIDML 588
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 115/251 (45%)
Query: 483 ETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTI 542
+ A L EM R ++ ++ + + + + + +E+ G + +T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 543 MDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
++ +C+ + A+ +L ++ G +P TFN L+ G + G + + L+ M+E G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 603 KPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWF 662
+P+ TYN ++ C D + + M + + D TY+ ++ C+ + A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 663 LHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINF 722
L KEM KG + +YN+L++G K K+ + L ++M +V + + +D+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 723 EEGNTEITLEL 733
+EG + EL
Sbjct: 310 KEGKLQEANEL 320
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 255 bits (652), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 246/465 (52%), Gaps = 6/465 (1%)
Query: 186 HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRM--VVKS 243
+ + IF +L+ A + K++ G S+ + N S L+ C G R+ V
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN---SLLNGFCHGNRISEAVAL 167
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
+ E+G +T ++ ++H L + K EA L+ +M ++GC PD+V++ +ING C
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
GE L L+ +M+ ++ + YN+++ LCK + +A + +M +GI PD
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y LI C G + A RL +M NI PDL+ + A+I F GK+VEAEKL+ EM+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 424 -GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGEL 482
+ PD + Y LI G+CK +++ + M L N VTYT L G ++ +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 483 ETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTI 542
+ A + +M G+ +I TYN +++GLC GN+ A+ + E M+ D TYTT+
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 543 MDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
++A CK+G++ +L + KG++P+VVT+ +M+GFC G+ E+ + L M E G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 603 KPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
PN+ TYN LI+ D +A++ K M + G D +T+ ++
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 238/495 (48%), Gaps = 36/495 (7%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +V FS +++ + + V+ L E+MQ G+ N YTY+ + C+ S++ A I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G P V +L++GFC ++ A L D+M + PD +T+T ++ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K EA L M+ +G +PD + Y A+I+G CK G A +L N M ++ +VV
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y + DGLCK ++ A +L ++M KG++ +++TYN +++ LC G A +L+ DM
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDML-DKGLQPSVVTFNVLMNGFCMSGMI 587
+PD + ++DA+ K G++V+A +L +M+ K P VV +N L+ GFC +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 588 EDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
E+G ++ + M ++GL N TY LI D ++K M + G+ PD TYNIL
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 648 LQG-----------------------------------HCKARNMKEAWFLHKEMVQKGF 672
L G CKA +++ W L + KG
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 673 NLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLE 732
+Y ++ GF ++ EA LF EM+ G + + Y + +G+ + E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 733 LCDAAIECYLVGKAT 747
L C G A+
Sbjct: 553 LIKEMRSCGFAGDAS 567
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 263/516 (50%), Gaps = 2/516 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KL++A LF ++ S+ + LS ++ + +V+ + LGI N +Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTY 113
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
+I I+ CR ++ A +L +M G P +V+ ++++NG+C+ + + L+++M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G +P+ T+ ++V L + +K EA ++ M+ +G PD V Y +I+G CK G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L ++M I D++ Y II G C M +A LF++M +G++PD Y LI
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR-KGLQ 498
C G A L ++M+ + P++V + AL D K G+L A +L EM + K
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 499 LNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHEL 558
++ YN+++ G CK + + +++ +M G +T TYTT++ + ++ + A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 559 LRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCL 618
+ M+ G+ P ++T+N+L++G C +G +E + ++M ++ +K + TY +I+ C
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 619 RNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS 678
+ ++ + +G+ P+ TY ++ G C+ +EA L EM + G + +
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
YN LI+ L+ + EL +EMR G D +
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 193/399 (48%), Gaps = 1/399 (0%)
Query: 334 RLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNII 393
R + + K+ +A + +M+ P V ++ L+ KM L ++M+ L I
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 394 PDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSL 453
+L TY+ I FC ++ A + +M+ G P + +L++G+C + +A +L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 454 HNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCK 513
+ MV M P+ VT+T L GL + + A L+ M KG Q ++ TY +++NGLCK
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 514 AGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVT 573
G A+ L+ ME D Y TI+D CK M A +L M KG++P V T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 574 FNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMC 633
+N L++ C G D +LL MLEK + P+ +N LI + K+Y M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 634 -AQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKY 692
++ PD YN L++G CK + ++E + +EM Q+G T +Y LI GF + +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 693 LEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITL 731
A+ +F++M G+ D Y +D GN E L
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 14/190 (7%)
Query: 151 LIHDFWAKPNLD-ASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFE 209
LIH F+ + D A + F V ++ D ++I L + A +FE
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVH------PDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 210 KLLNYGLVISVDSCNLFLSRLSNTC---DGLRMVVKSFTEFPELGICWNTASYNIMIHCL 266
+ + + + + + L DG + F G+ N +Y M+
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL----FCSLSLKGVKPNVVTYTTMMSGF 506
Query: 267 CRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNP 326
CR G +EA L ++M+ G P+ +++T+I G+ +LI+EM+ G +
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 327 YTYNSVVRLL 336
T+ V +L
Sbjct: 567 STFGLVTNML 576
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 248/468 (52%), Gaps = 24/468 (5%)
Query: 187 VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNT----------CDG 236
+FD+ + + R ++EA + F + G ++CN L+ LS D
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 237 LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFST 296
RM +KS N ++NIMI+ LC+ GK+K+A L ME+ G P +V+++T
Sbjct: 217 YRMEIKS-----------NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 297 IINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
++ G+ G ++ +I EM+ KG +P+ TYN ++ +C + E +LREM G
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIG 322
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
+VPD+V Y LI G G++ A+ DEM ++P TY +I G + K+ AE
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 417 KLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGL 476
L E+ +G+ D + Y LI+GYC+ G KKAF+LH+ M+ + P TYT+L L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 477 CKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDT 536
C+ + A+EL ++ KG++ ++ N++++G C GN+ +A L+++M++ +PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 537 FTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKW 596
TY +M C G+ +A EL+ +M +G++P +++N L++G+ G + +
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
ML G P TYN L+K + ++ + M ++GI P+ +++
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 231/456 (50%), Gaps = 3/456 (0%)
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
+T +++++ C C+ + EA M+ +G P + + I+ L ++
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKM 374
+M +K N YT+N ++ +LCK K+ +A+ L M GI P V Y TL+ GF
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 375 GNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVY 434
G + A + EM+ PD+ TY I+ C G+ A ++ EM GL PD + Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
LI G G ++ AF+ + MV + P TY L GL ++E A L+ E+
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
KG+ L+ TYN ++NG C+ G+ +A L ++M G P FTYT+++ C+ + +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
A EL ++ KG++P +V N LM+G C G ++ LLK M + P+ TYN L++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNL 674
C ++ M +GI PD +YN L+ G+ K + K A+ + EM+ GFN
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 675 TTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
T +YNAL+KG K ++ A EL EM+ G+V +
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 220/394 (55%), Gaps = 8/394 (2%)
Query: 183 SDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLS--RLSNTCDGLRMV 240
S+ + F+I VL + KL +A+ + +G+ ++ + N + L +G R++
Sbjct: 223 SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLI 282
Query: 241 VKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIING 300
+ +E G + +YN ++ +C G+ E +L +M+ G PD VS++ +I G
Sbjct: 283 I---SEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRG 336
Query: 301 YCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPD 360
G+L+ +EM +G+ P YTYN+++ L +K+ AE ++RE+ +GIV D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 361 NVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFH 420
+V Y LI+G+C+ G+ A+ L DEM I P TYT++I C K EA++LF
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 421 EMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSG 480
+++G+G++PD ++ L+DG+C G M +AFSL M M + P+ VTY L GLC G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 481 ELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYT 540
+ E A EL+ EM R+G++ + +YN++++G K G+ A + ++M GF+P TY
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 541 TIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTF 574
++ K+ E A ELLR+M +G+ P+ +F
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 176/312 (56%), Gaps = 3/312 (0%)
Query: 202 NEAR--KLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
NE R ++ ++ GLV S N+ + SN D L M E + G+ +Y
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD-LEMAFAYRDEMVKQGMVPTFYTY 365
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
N +IH L KI+ A +L+ ++ +G D V+++ +INGYC G+ ++ L +EM
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G++P +TY S++ +LC+ +K EA+ + +++ +G+ PD V+ TL+DG C +GN+
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A+ L EM ++I PD +TY ++ G C GK EA +L EM RG++PD I Y LI
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
GY K G K AF + + M+ + P ++TY AL GL K+ E E A ELL EM +G+
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 500 NIYTYNSIVNGL 511
N ++ S++ +
Sbjct: 606 NDSSFCSVIEAM 617
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 3/400 (0%)
Query: 329 YNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMR 388
++ +VR C+ V EA M +G P ++ ++ + A+ + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 389 GLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMK 448
+ I ++ T+ +I C GK+ +A+ M G++P + Y L+ G+ G ++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 449 KAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIV 508
A + + M P++ TY + +C G A+E+L EM GL + +YN ++
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 509 NGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQ 568
G G++ A ++M G P +TY T++ ++ A L+R++ +KG+
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 569 PSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKI 628
VT+N+L+NG+C G + L M+ G++P TY LI C +N R ++
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 629 YKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLK 688
++ + +G+ PD N L+ GHC NM A+ L KEM N +YN L++G
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 689 RKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE 728
K+ EAREL EM+R G+ D Y + ++G+T+
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 4/328 (1%)
Query: 407 CLTGKMV-EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPN 465
C +MV EA + F+ M +G P ++ + ++ A+ + +M M + N
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSN 224
Query: 466 VVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLME 525
V T+ + + LCK G+L+ A L M G++ I TYN++V G G I A ++
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 526 DMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSG 585
+M+ GF PD TY I+ C G +A E+LR+M + GL P V++N+L+ G +G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 586 MIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYN 645
+E M+++G+ P TYN LI + N + + + + +GI D TYN
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 646 ILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRG 705
IL+ G+C+ + K+A+ LH EM+ G T +Y +LI ++ K EA ELFE++
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 706 GLVADREIYYFFVDINFEEGNTEITLEL 733
G+ D + +D + GN + L
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 194 VLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFT---EFPEL 250
VL K EA +LFEK++ G+ + + ++ L + + + ++F+ E +
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDL----VMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
I + +YN ++ LC GK +EA L+ +M+ RG PD +S++T+I+GY G+ +
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
+ +EM G P TYN++++ L K + AE +LREM ++GIVP++ + ++I+
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Query: 371 FCKMGNVAA 379
M N+ A
Sbjct: 617 ---MSNLDA 622
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 71/182 (39%), Gaps = 3/182 (1%)
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
M +KG P T N ++ IE+ M +K N T+N +I C
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
++ M GI P TYN L+QG ++ A + EM KGF +YN
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIECY 741
++ + A E+ EM+ GLV D Y + G+ E+ D ++
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 742 LV 743
+V
Sbjct: 358 MV 359
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 235/431 (54%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P ++ FS +++ + + V+ E+M+I G+ N YTYN ++ C+ S++ A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G PD V +L++GFC ++ A L D+M + PD +T+T +I G L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
K EA L M+ RG +PD + Y A+++G CK G A +L N M ++ NVV
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y+ + D LCK + A L EM KG++ N+ TY+S+++ LC G A +L+ DM
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
+P+ T++ ++DA+ K G++VKA +L +M+ + + P++ T++ L+NGFCM +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+ +++L+ M+ K PN TYN LI C + ++++ M +G+ + TY L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
G +AR+ A + K+MV G + +YN L+ G K K +A +FE ++R +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 709 ADREIYYFFVD 719
D Y ++
Sbjct: 496 PDIYTYNIMIE 506
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 233/420 (55%), Gaps = 1/420 (0%)
Query: 240 VVKSFTEFPE-LGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTII 298
+V SF E E LGI N +YNI+I+C CR ++ A LL +M G PD+V+ ++++
Sbjct: 96 LVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLL 155
Query: 299 NGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIV 358
NG+C+ + + L+++M G KP+ T+ +++ L +K EA ++ M+ +G
Sbjct: 156 NGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ 215
Query: 359 PDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKL 418
PD V Y +++G CK G+ A L ++M I +++ Y+ +I C +A L
Sbjct: 216 PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 419 FHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCK 478
F EM +G+ P+ I Y++LI C G A L ++M+ ++ PN+VT++AL D K
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 479 SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT 538
G+L A +L EM ++ + NI+TY+S++NG C + +A +++E M P+ T
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 539 YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWML 598
Y T+++ +CK+ + K EL R+M +GL + VT+ L++GF + ++ + + K M+
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 599 EKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMK 658
G+ PN TYN L+ C + +++ + + PD TYNI+++G CKA K
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 194/388 (50%)
Query: 327 YTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDE 386
Y Y V+R ++ +A + M P + ++ L+ KM ++
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 387 MRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGG 446
M L I +L TY +I FC ++ A L +M+ G EPD + +L++G+C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 447 MKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNS 506
+ A +L + MV M P+ VT+T L GL + A L+ M ++G Q ++ TY +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 507 IVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKG 566
+VNGLCK G+ A+ L+ ME A + Y+T++D+ CK A L +M +KG
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 567 LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTA 626
++P+V+T++ L++ C G D +LL M+E+ + PN T++ LI + +
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 627 KIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGF 686
K+Y+ M + I P+ TY+ L+ G C + EA + + M++K +YN LI GF
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 687 LKRKKYLEARELFEEMRRGGLVADREIY 714
K K+ + ELF EM + GLV + Y
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTY 431
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 569 PSVVTFNVL------MNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDM 622
PS++ F+ L MN F + +I GEK M G+ N TYN LI C + +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDL--VISFGEK----MEILGISHNLYTYNILINCFCRCSRL 129
Query: 623 RTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNAL 682
+ M G PD T N LL G C + +A L +MV+ G+ T ++ L
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 683 IKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD----AAI 738
I G K EA L + M + G D Y V+ + G+T++ L L + A I
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 739 ECYLVGKAT 747
E +V +T
Sbjct: 250 EANVVIYST 258
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 293/591 (49%), Gaps = 36/591 (6%)
Query: 112 RLVLDFFD-WACLRREPILEARCIVVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHF 170
RL+L+ + ++C EP ++ +V++I V+ K A + +D ++ I T F
Sbjct: 167 RLMLEMRNVYSC---EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-----KIPPTLF 218
Query: 171 VERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL 230
F + + +++ A L + +G V + + L
Sbjct: 219 T----------------FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 231 SNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPD 290
S C+ + ++ E +G + ++N +I LC+F +I EA ++ +M +RG +PD
Sbjct: 263 SK-CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 291 VVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILR 350
+++ ++NG C +G + L + KP +N+++ ++ +A+ +L
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 351 EMMNQ-GIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
+M+ GIVPD Y +LI G+ K G V A + +MR P++ +YT ++ GFC
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 410 GKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTY 469
GK+ EA + +EM GL+P+ + + LI +CK + +A + M P+V T+
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 470 TALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEV 529
+L GLC+ E++ A LL +M +G+ N TYN+++N + G I +A KL+ +M
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 530 AGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIED 589
G D TY +++ C++GE+ KA L ML G PS ++ N+L+NG C SGM+E+
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 590 GEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQ 649
+ K M+ +G P+ T+N LI C + +++ + A+GI PD T+N L+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 650 GHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGF-----LKRKKYLEA 695
CK + +A L E ++ GF +++ L++ L R+++ A
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNA 728
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 261/512 (50%), Gaps = 15/512 (2%)
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMI 263
+RK+ L +G+V+ C + N D +++ T+ G N+ Y +I
Sbjct: 210 SRKIPPTLFTFGVVMKA-FCAV------NEIDSALSLLRDMTKH---GCVPNSVIYQTLI 259
Query: 264 HCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLK 323
H L + ++ EA LL +M L GC PD +F+ +I G C + K++ M I+G
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
P+ TY ++ LCK +V A+ + + P+ VI+ TLI GF G + A +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 384 FDEM-RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYC 442
+M I+PD+ TY ++I G+ G + A ++ H+M +G +P+ YT L+DG+C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 443 KAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIY 502
K G + +A+++ N M L PN V + L CK + A E+ EM RKG + ++Y
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 503 TYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDM 562
T+NS+++GLC+ I A+ L+ DM G +T TY T+++A+ + GE+ +A +L+ +M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 563 LDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDM 622
+ +G +T+N L+ G C +G ++ L + ML G P+ + N LI C +
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 623 RTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNAL 682
+ K M +G TPD T+N L+ G C+A +++ + +++ +G T ++N L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 683 IKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
+ K +A L +E G V + +
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 6/458 (1%)
Query: 259 YNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQ 318
Y ++I L G+ K LL+QM+ G F +I+ Y G + +L+ EM+
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 319 -IKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNV 377
+ +P +YN V+ +L + A + +M+++ I P + ++ FC + +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 378 AAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTAL 437
+A L +M +P+ + Y +I ++ EA +L EM G PD + +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 438 IDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGL 497
I G CK + +A + N M+ P+ +TY L +GLCK G ++ A +L + + +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP-- 351
Query: 498 QLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVA-GFHPDTFTYTTIMDAYCKSGEMVKAH 556
I +N++++G G + A ++ DM + G PD TY +++ Y K G + A
Sbjct: 352 --EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 557 ELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQH 616
E+L DM +KG +P+V ++ +L++GFC G I++ +L M GLKPN +N LI
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 617 CLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTT 676
C + + +I++ M +G PD T+N L+ G C+ +K A +L ++M+ +G T
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 677 SSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
+YN LI FL+R + EAR+L EM G D Y
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 468 TYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
Y L L +GE +T + LL +M +G+ + SI+ KAG Q +LM +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 528 E-VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGM 586
V P +Y +++ A + DML + + P++ TF V+M FC
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 587 IEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNI 646
I+ LL+ M + G PN+ Y LI N + ++ + M G PD T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 647 LLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGG 706
++ G CK + EA + M+ +GF +Y L+ G K + A++LF + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 707 LVADREIYYFFV 718
+V + + FV
Sbjct: 353 IVIFNTLIHGFV 364
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 225/404 (55%)
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
L++ M G+K Y+ VV LC+ +V +++ +++E +GI P+ Y T+I+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
+ K + + + M+ ++ + +TYT ++ GKM +AEKLF EM RG+E D
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
VYT+LI C+ G MK+AF L + + L+P+ TY AL DG+CK GE+ A L++
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG 550
EM KG+ + +N++++G C+ G + +A + + ME GF D FT TI + +
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 551 EMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYN 610
+A + L M++ G++ S V++ L++ +C G +E+ ++L M KG++PNA TYN
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 611 PLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQK 670
+I +C + ++ K+ M A G+ PD TY L+ G C A N+ EA L EM K
Sbjct: 509 VMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 671 GFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIY 714
G + + +Y +I G K K EA L++EM+R G D ++Y
Sbjct: 569 GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 242/495 (48%), Gaps = 36/495 (7%)
Query: 189 DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFP 248
D+ F+V V+ E ++F+ ++ GL I SC +FL + +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLV--------------AAKKRR 203
Query: 249 ELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQ 308
+ +C + +M G V S + ++ G C GE++
Sbjct: 204 RIDLCLE----------------------IFRRMVDSGVKITVYSLTIVVEGLCRRGEVE 241
Query: 309 RVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLI 368
+ KLI+E +KG+KP YTYN+++ K E +L+ M G+V + V YT L+
Sbjct: 242 KSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLM 301
Query: 369 DGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLE 428
+ K G ++ A +LFDEMR I D+ YT++I C G M A LF E+ +GL
Sbjct: 302 ELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLS 361
Query: 429 PDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANEL 488
P Y ALIDG CK G M A L N M + V + L DG C+ G ++ A+ +
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMI 421
Query: 489 LHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCK 548
M +KG Q +++T N+I + + +A + + M G T +YT ++D YCK
Sbjct: 422 YDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 549 SGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAAT 608
G + +A L +M KG+QP+ +T+NV++ +C G I++ KL M G+ P++ T
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Query: 609 YNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMV 668
Y LI C+ +++ +++ M +G+ + TY +++ G KA EA+ L+ EM
Sbjct: 542 YTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Query: 669 QKGFNLTTSSYNALI 683
+KG+ + Y ALI
Sbjct: 602 RKGYTIDNKVYTALI 616
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 5/326 (1%)
Query: 188 FDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTC--DGLRMVVKSFT 245
+ + ++ V+ K+++A KLF+++ G+ V +++ S +S C ++ F
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDV---HVYTSLISWNCRKGNMKRAFLLFD 353
Query: 246 EFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLG 305
E E G+ ++ +Y +I +C+ G++ A +L+ +M+ +G + V F+T+I+GYC G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 306 ELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYT 365
+ + + M+ KG + + +T N++ + + EA+ L MM G+ V YT
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 366 TLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGR 425
LID +CK GNV A RLF EM + P+ +TY +I +C GK+ EA KL M
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 426 GLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETA 485
G++PD YT+LI G C A + +A L + M L N VTYT + GL K+G+ + A
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 486 NELLHEMCRKGLQLNIYTYNSIVNGL 511
L EM RKG ++ Y +++ +
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%)
Query: 592 KLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGH 651
++ + M++ G+K + +++ C R ++ + K+ K +GI P+ TYN ++ +
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 652 CKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADR 711
K R+ + K M + G +Y L++ +K K +A +LF+EMR G+ +D
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 712 EIYYFFVDINFEEGNTEITLELCDAAIE 739
+Y + N +GN + L D E
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTE 357
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 252 bits (644), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/511 (30%), Positives = 263/511 (51%), Gaps = 9/511 (1%)
Query: 189 DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFP 248
+I +VL ++R +N+A ++E ++ +G++ +V + N L D L V K + E
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD-LERVDKIWLEMK 265
Query: 249 ELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQ 308
I ++ +YNI+I+ + GK++EA M G + SF+ +I GYC G
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 309 RVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLI 368
+ +EM G+ P TYN + LC ++ +A RE+++ PD V Y TL+
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLM 381
Query: 369 DGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLE 428
G+ KMG A LFD++R +I P ++TY +I G C +G + A++L EM + +
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 429 PDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANEL 488
PD I YT L+ G+ K G + A +++ M+ + P+ YT A G + G+ + A L
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 489 LHEMCRKGLQL-NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYC 547
EM ++ YN ++GLCK GN+++A++ + G PD TYTT++ Y
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 548 KSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAA 607
++G+ A L +ML K L PSV+T+ VL+ G +G +E + M ++G++PN
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 608 TYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEM 667
T+N L+ C ++ + M +GI P+ +Y +L+ +C +E L+KEM
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Query: 668 VQKGFNLTTSSYNALIKGFLKRKKYLEAREL 698
+ K ++ AL K +K E+RE+
Sbjct: 682 LDKEIEPDGYTHRALFKHL---EKDHESREV 709
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 243/499 (48%), Gaps = 12/499 (2%)
Query: 208 FEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKS---FTEFPELGICWNTASYNIMIH 264
FEK++ G + SV +CN+ L L ++ RM+ K+ + E GI ++N M+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDS----RMMNKASAVYETMIEHGIMPTVITFNTMLD 246
Query: 265 CLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKP 324
+ G ++ + L+M+ R V+++ +ING+ G+++ + +M+ G
Sbjct: 247 SCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAV 306
Query: 325 NPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLF 384
PY++N ++ CK +A + EM+N GI P Y I C G + A L
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 385 DEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKA 444
M PD+++Y ++ G+ GK VEA LF ++ + P + Y LIDG C++
Sbjct: 367 SSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 445 GGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTY 504
G ++ A L M + P+V+TYT L G K+G L A E+ EM RKG++ + Y Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 505 NSIVNGLCKAGNILQAVKLMEDMEVAGFH-PDTFTYTTIMDAYCKSGEMVKAHELLRDML 563
+ G + G+ +A +L E+M H PD Y +D CK G +VKA E R +
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 564 DKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMR 623
GL P VT+ ++ G+ +G + L ML K L P+ TY LI H +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 624 TTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALI 683
+ M +G+ P+ T+N LL G CKA N+ EA+ +M ++G SY LI
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 684 KGFLKRKKYLEARELFEEM 702
+K+ E +L++EM
Sbjct: 663 SKNCDFEKWEEVVKLYKEM 681
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 209/394 (53%), Gaps = 6/394 (1%)
Query: 185 PHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSF 244
P+ F+ + + ++A + +++LN G+ + + N+++ L CD R +
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL---CDFGR--IDDA 362
Query: 245 TEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYL 304
E + SYN ++H + GK EA LL + P +V+++T+I+G C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 305 GELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIY 364
G L+ +L EEM + + P+ TY ++V+ K + A + EM+ +GI PD Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 365 TTLIDGFCKMGNVAAAYRLFDEMRGLNI-IPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
TT G ++G+ A+RL +EM + PDL Y I G C G +V+A + ++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
GL PD + YT +I GY + G K A +L++ M+ RL P+V+TY L G K+G LE
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A + EM ++G++ N+ T+N+++ G+CKAGNI +A + + ME G P+ ++YT ++
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVL 577
C + + +L ++MLDK ++P T L
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 204/422 (48%), Gaps = 5/422 (1%)
Query: 308 QRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTL 367
++ L E+M KG P+ N V+++L + + +A + M+ GI+P + + T+
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244
Query: 368 IDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGL 427
+D K G++ +++ EM+ NI +TY +I GF GKM EA + +M G
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 428 EPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANE 487
+ LI+GYCK G A+ + + M++ + P TY LC G ++ A E
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 488 LLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYC 547
LL M ++ +YN++++G K G ++A L +D+ HP TY T++D C
Sbjct: 365 LLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 548 KSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAA 607
+SG + A L +M + + P V+T+ L+ GF +G + ++ ML KG+KP+
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 608 TYNPLIKQHCLRNDMRTTAKIYKGMCAQG-ITPDGNTYNILLQGHCKARNMKEAWFLHKE 666
Y D ++++ M A PD YN+ + G CK N+ +A ++
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 667 MVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGN 726
+ + G +Y +I+G+L+ ++ AR L++EM R L Y+ + + + G
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR 600
Query: 727 TE 728
E
Sbjct: 601 LE 602
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 196 VEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDG-LRMVVKSFTEFPELGICW 254
+E + AR L++++L L SV F+ + G L + TE + G+
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSV--ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
N ++N +++ +C+ G I EA+ L +ME G P+ S++ +I+ C + + V+KL
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMN 354
+EM K ++P+ YT+ ++ + L K + E E + R +++
Sbjct: 679 KEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLLS 718
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 220/408 (53%), Gaps = 3/408 (0%)
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
FS +I + +G + L + EM+ P+ S++ L + + + M+
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
++G+VPD IY L K G + +L DEM L I P++ YT I C KM
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
EAEK+F M G+ P+ Y+A+IDGYCK G +++A+ L+ ++ L PNVV + L
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
DG CK+ EL TA L M + G+ N+Y YN +++G CK+GN+L+AV L+ +ME
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
PD FTYT +++ C ++ +A+ L + M ++ + PS T+N L++G+C +E L
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
M G++PN T++ LI +C D++ +Y M +GI PD TY L+ H K
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEE 701
NMKEA L+ +M++ G + ++ L+ GF K + A + ++E
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 223/426 (52%)
Query: 285 RGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVE 344
RG PDV + + G + KL++EM G+KPN Y Y + LC+ +K+ E
Sbjct: 193 RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEE 252
Query: 345 AETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIIC 404
AE + M G++P+ Y+ +IDG+CK GNV AY L+ E+ ++P+++ + ++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 405 GFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTP 464
GFC ++V A LF M+ G++P+ VY LI G+CK+G M +A L + M + L+P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 465 NVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLM 524
+V TYT L +GLC ++ AN L +M + + + TYNS+++G CK N+ QA+ L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 525 EDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMS 584
+M +G P+ T++T++D YC ++ A L +M KG+ P VVT+ L++
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 585 GMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
+++ +L MLE G+ PN T+ L+ + Y+ Q + +
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 645 NILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRR 704
L++G C+ + A +M G SY +++KG L+ K+ + L +M +
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
Query: 705 GGLVAD 710
G++ +
Sbjct: 613 TGILPN 618
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 264/556 (47%), Gaps = 20/556 (3%)
Query: 182 GSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVV 241
+D F VL A K AR L + L+ RL + M
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIE---------------RLKRHSEPSNMSH 116
Query: 242 KSFTEFPEL-GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIING 300
+ F ++ ++ ++++I G +EA L + E++ CSPD + +I+NG
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEA--LWVSREMK-CSPDSKACLSILNG 173
Query: 301 YCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPD 360
V + M +GL P+ + Y + + K + E +L EM + GI P+
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPN 233
Query: 361 NVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFH 420
IYT I C+ + A ++F+ M+ ++P+L TY+A+I G+C TG + +A L+
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 421 EMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSG 480
E+L L P+ +V+ L+DG+CKA + A SL +MV + PN+ Y L G CKSG
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 481 ELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYT 540
+ A LL EM L +++TY ++NGLC + +A +L + M+ P + TY
Sbjct: 354 NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 541 TIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEK 600
+++ YCK M +A +L +M G++P+++TF+ L++G+C I+ L M K
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 601 GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEA 660
G+ P+ TY LI H +M+ ++Y M GI P+ +T+ L+ G K + A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 661 WFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDI 720
++E Q+ + LI+G + L A F +MR G+ D Y +
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 721 NFEEGNTEITLEL-CD 735
+ +E T+ L CD
Sbjct: 594 HLQEKRITDTMMLQCD 609
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 215/422 (50%)
Query: 242 KSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGY 301
K E LGI N Y I I LCR K++EA + M+ G P++ ++S +I+GY
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 302 CYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDN 361
C G +++ L +E+ + L PN + ++V CK ++V A ++ M+ G+ P+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 362 VIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHE 421
+Y LI G CK GN+ A L EM LN+ PD+ TYT +I G C+ ++ EA +LF +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 422 MLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGE 481
M + P Y +LI GYCK M++A L + M + PN++T++ L DG C +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 482 LETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTT 541
++ A L EM KG+ ++ TY ++++ K N+ +A++L DM AG HP+ T+
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 542 IMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKG 601
++D + K G + A + ++ + + V F L+ G C +G I + M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 602 LKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAW 661
+ P+ +Y ++K H + T + M GI P+ +L + + +K A
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Query: 662 FL 663
FL
Sbjct: 640 FL 641
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 208/421 (49%), Gaps = 3/421 (0%)
Query: 172 ERLIYTYKDWGSDPHVF--DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSR 229
E+L+ G P+V+ I+ L K+ EA K+FE + +G++ ++ + + +
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 230 LSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSP 289
T +R + E + N + ++ C+ ++ A L + M G P
Sbjct: 279 YCKT-GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 290 DVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETIL 349
++ ++ +I+G+C G + + L+ EM+ L P+ +TY ++ LC +V EA +
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
++M N+ I P + Y +LI G+CK N+ A L EM + P+++T++ +I G+C
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Query: 410 GKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTY 469
+ A L+ EM +G+ PD + YTALID + K MK+A L+++M+ + PN T+
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Query: 470 TALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEV 529
L DG K G L A + E ++ N + ++ GLC+ G IL+A + DM
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 530 AGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIED 589
G PD +Y +++ + + + L DM+ G+ P+++ +L + +G ++
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKS 637
Query: 590 G 590
Sbjct: 638 A 638
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 186/377 (49%), Gaps = 3/377 (0%)
Query: 363 IYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEM 422
+++ LI F +MG A + EM+ PD +I+ G + + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 423 LGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGEL 482
+ RGL PD +Y L K G K L + M + + PNV YT LC+ ++
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 483 ETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTI 542
E A ++ M + G+ N+YTY+++++G CK GN+ QA L +++ VA P+ + T+
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 543 MDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGL 602
+D +CK+ E+V A L M+ G+ P++ +N L++G C SG + + LL M L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 603 KPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWF 662
P+ TY LI C+ + + ++++ M + I P TYN L+ G+CK NM++A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 663 LHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINF 722
L EM G +++ LI G+ + A L+ EM G+V D Y +D +F
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 723 EEGNTEITLELCDAAIE 739
+E N + L L +E
Sbjct: 491 KEANMKEALRLYSDMLE 507
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 13/342 (3%)
Query: 119 DWACLRREPILEARCIVVQISVAAKD--LKTAHGLIHDFWAKPNLDASIAFTHFVERLIY 176
D C RE ++ AR + V + D L + LIH N+ ++ +E L
Sbjct: 312 DGFCKARE-LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL-- 368
Query: 177 TYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDG 236
+ D + I L ++ EA +LF+K+ N + S + N S + C
Sbjct: 369 ---NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN---SLIHGYCKE 422
Query: 237 LRM--VVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSF 294
M + +E G+ N +++ +I C IK A L +M ++G PDVV++
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 295 STIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMN 354
+ +I+ + ++ L+L +M G+ PN +T+ +V K ++ A +E
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 355 QGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVE 414
Q ++V +T LI+G C+ G + A R F +MR I PD+ +Y +++ G ++ +
Sbjct: 543 QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITD 602
Query: 415 AEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNN 456
L +M+ G+ P+ +V L Y G +K A L N+
Sbjct: 603 TMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNS 644
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 277/555 (49%), Gaps = 13/555 (2%)
Query: 187 VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL-----SNTCDGLRMVV 241
+FDI + K + A ++F+K++ L ++ +CN L L S + R V
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV- 191
Query: 242 KSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQM--ELRGCSPDVVSFSTIIN 299
F + ++G+ N ++N++++ C GK+++A +L +M E + +PD V+++TI+
Sbjct: 192 --FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK-VNPDNVTYNTILK 248
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVP 359
G L + +L+ +M+ GL PN TYN++V CK + EA I+ M ++P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 360 DNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLF 419
D Y LI+G C G++ L D M+ L + PD++TY +I G G +EA KL
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 420 HEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMR-LTPNVVTYTALADGLCK 478
+M G++ +++ + + CK + +V M +P++VTY L K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 479 SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT 538
G+L A E++ EM +KG+++N T N+I++ LCK + +A L+ GF D T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 539 YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWML 598
Y T++ + + ++ KA E+ +M + P+V TFN L+ G C G E + +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 599 EKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMK 658
E GL P+ +T+N +I +C + + Y PD T NILL G CK +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 659 EAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
+A ++++ + T +YN +I F K KK EA +L EM GL DR Y F+
Sbjct: 609 KALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 719 DINFEEGNTEITLEL 733
+ E+G T EL
Sbjct: 668 SLLMEDGKLSETDEL 682
Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 171/311 (54%), Gaps = 2/311 (0%)
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQM-ELRGCSPDVVSFSTIINGYCYLGELQR 309
G+ N ++NI + LC+ K + + ++ ++ G SPD+V++ T+I Y +G+L
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 310 VLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLID 369
L+++ EM KG+K N T N+++ LCK K+ EA +L +G + D V Y TLI
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 370 GFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEP 429
GF + V A ++DEM+ + I P + T+ ++I G C GK A + F E+ GL P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 430 DEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELL 489
D+ + ++I GYCK G ++KAF +N + P+ T L +GLCK G E A
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 490 HEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKS 549
+ + + +++ TYN++++ CK + +A L+ +ME G PD FTY + + +
Sbjct: 615 NTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673
Query: 550 GEMVKAHELLR 560
G++ + ELL+
Sbjct: 674 GKLSETDELLK 684
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 247/501 (49%), Gaps = 51/501 (10%)
Query: 135 VVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQV 194
+V+I V+ +++T + L++ + + L+ ++ +ER++ +K D ++ +
Sbjct: 195 MVKIGVSL-NVQTFNVLVNGYCLEGKLEDALGM---LERMVSEFK-VNPDNVTYNTILKA 249
Query: 195 LVEARKLNEARKLFEKLLNYGLVIS-VDSCNLFLS--RLSNTCDGLRMV--VKSFTEFPE 249
+ + +L++ ++L + GLV + V NL +L + + ++V +K P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 250 LGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQR 309
L +YNI+I+ LC G ++E L+ M+ PDVV+++T+I+G LG
Sbjct: 310 L------CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 310 VLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMN-QGIVPDNVIYTTLI 368
KL+E+M+ G+K N T+N ++ LCK K ++E+++ G PD V Y TLI
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 369 DGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLE 428
+ K+G+++ A + EM I + +T I+ C K+ EA L + RG
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 429 PDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANEL 488
DE+ Y LI G+ + ++KA + + M +++TP V T+ +L GLC G+ E A E
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 489 LHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPD------------- 535
E+ GL + T+NSI+ G CK G + +A + + F PD
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 536 ---------------------TFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTF 574
T TY T++ A+CK ++ +A++LL +M +KGL+P T+
Sbjct: 604 EGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 575 NVLMNGFCMSGMIEDGEKLLK 595
N ++ G + + ++LLK
Sbjct: 664 NSFISLLMEDGKLSETDELLK 684
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 218/456 (47%), Gaps = 5/456 (1%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCK---TSKVVEA 345
P F ++ Y + G+ L++ ++M LKPN T N+++ L + + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 346 ETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRG-LNIIPDLLTYTAIIC 404
+ +M+ G+ + + L++G+C G + A + + M + PD +TY I+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 405 GFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTP 464
G++ + ++L +M GL P+ + Y L+ GYCK G +K+AF + M + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 465 NVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLM 524
++ TY L +GLC +G + EL+ M LQ ++ TYN++++G + G L+A KLM
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 525 EDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLD-KGLQPSVVTFNVLMNGFCM 583
E ME G + T+ + CK + +++++D G P +VT++ L+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 584 SGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNT 643
G + ++++ M +KG+K N T N ++ C + + +G D T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 644 YNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMR 703
Y L+ G + +++A + EM + T S++N+LI G K A E F+E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 704 RGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
GL+ D + + +EG E E + +I+
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 34/356 (9%)
Query: 120 WACL--RREPILEARCIVVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYT 177
W C +RE + +V + + D+ T H LI + +L ++ + +
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ---- 444
Query: 178 YKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVIS-VDSCNLFLSRLSNTCDG 236
K + + L + RKL+EA L G ++ V L + +
Sbjct: 445 -KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE--EK 501
Query: 237 LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFST 296
+ ++ + E ++ I +++N +I LC GK + A ++ G PD +F++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 297 IINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQG 356
II GYC G +++ + E KP+ YT N ++ LCK +A ++ +
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 357 IVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAE 416
V D V Y T+I FCK + AY L EM + PD TY + I GK+ E +
Sbjct: 622 EV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 417 KLFHEMLGR-----------------------GLEPDEIVYTALIDGYCKAGGMKK 449
+L + G+ L + I Y+ +ID C G +K+
Sbjct: 681 ELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 277/535 (51%), Gaps = 11/535 (2%)
Query: 187 VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLS---RLSNTCDGLRMVVKS 243
++++ L + +++N+A +LF+++L L+ S+ + N + + N ++ +
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
+ E + ++N ++ L + G +++A +L +M+ G PD +FS + +GY
Sbjct: 276 KADHIEPSLI----TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
+ + L + E G+K N YT + ++ LCK K+ +AE IL M +G+VP+ VI
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y T+IDG+C+ G++ A + M + PD L Y +I FC G+M AEK ++M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
+G+ P Y LI GY + K F + M PNVV+Y L + LCK +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A + +M +G+ + YN +++G C G I A + ++M G + TY T++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 544 DAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLK 603
D +G++ +A +LL ++ KGL+P V T+N L++G+ +G ++ L + M G+K
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 604 PNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFL 663
P TY+ LI C + + T +++ M + PD YN +L + +M++A+ L
Sbjct: 632 PTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 664 HKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
K+M++K L ++YN+LI G LK K E R L +EM + + + Y V
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 274/524 (52%), Gaps = 6/524 (1%)
Query: 187 VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTE 246
F+ + L +A + +A + +++ + G V + ++ S+ + + +
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN-EKAEAALGVYET 344
Query: 247 FPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGE 306
+ G+ N + +I+++ LC+ GKI++A +L + +G P+ V ++T+I+GYC G+
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 307 LQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTT 366
L IE M+ +G+KP+ YN ++R C+ ++ AE + +M +G+ P Y
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 367 LIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRG 426
LI G+ + + + EM +P++++Y +I C K++EA+ + +M RG
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 427 LEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETAN 486
+ P +Y LIDG C G ++ AF M+ + N+VTY L DGL +G+L A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 487 ELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAY 546
+LL E+ RKGL+ +++TYNS+++G AGN+ + + L E+M+ +G P TY ++
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 547 CKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNA 606
K G + L +M L+P ++ +N +++ + + G +E L K M+EK + +
Sbjct: 645 TKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 607 ATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKE 666
TYN LI + + M A+ + P+ +TYNI+++GHC+ ++ A+ ++E
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYRE 760
Query: 667 MVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
M +KGF L N L+ G + + EA + EM G ++ D
Sbjct: 761 MQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM-NGRMLGD 803
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 249/517 (48%), Gaps = 36/517 (6%)
Query: 194 VLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGIC 253
+L E++ ++EA LF L N G+ S DS L L L T R+ + F
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKT-KQFRVTINVF--------- 167
Query: 254 WNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKL 313
L +L+ + R P + I L ++ + L+L
Sbjct: 168 -----------------------LNILESDFR---PSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 314 IEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCK 373
M+ + P+ + YN ++ LCK ++ +AE + EM+ + ++P + Y TLIDG+CK
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 374 MGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIV 433
GN ++++ + M+ +I P L+T+ ++ G G + +AE + EM G PD
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 434 YTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMC 493
++ L DGY + A ++ V + N T + L + LCK G++E A E+L
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 494 RKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMV 553
KGL N YN++++G C+ G+++ A +E ME G PD Y ++ +C+ GEM
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 554 KAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLI 613
A + + M KG+ PSV T+N+L+ G+ + +LK M + G PN +Y LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 614 KQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFN 673
C + + + + M +G++P YN+L+ G C +++A+ KEM++KG
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 674 LTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVAD 710
L +YN LI G K EA +L E+ R GL D
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 4/428 (0%)
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
+G+ P+ + ++ L KT + + ++ P +Y I K+ +V
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
LF+ M+ I P + Y +I G C +M +AE+LF EML R L P I Y LID
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
GYCKAG +K+F + M + P+++T+ L GL K+G +E A +L EM G
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+ +T++ + +G A+ + E +G + +T + +++A CK G++ KA E+L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
+ KGL P+ V +N +++G+C G + ++ M ++G+KP+ YN LI++ C
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSY 679
+M K M +G++P TYNIL+ G+ + + + + KEM G SY
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 680 NALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE----ITLELCD 735
LI K K LEA+ + +M G+ IY +D +G E + E+
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 736 AAIECYLV 743
IE LV
Sbjct: 558 KGIELNLV 565
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 229/420 (54%), Gaps = 3/420 (0%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +V FS +++ V+ L M++ G+ + Y+YN V+ LC+ S+ V A ++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+ +MM G PD V ++LI+GFC+ V A L +M + PD++ Y II G C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
G + +A +LF M G+ D + Y +L+ G C +G A L +MV + PNV+T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+TA+ D K G+ A +L EM R+ + +++TYNS++NGLC G + +A ++++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
G PD TY T+++ +CKS + + +L R+M +GL +T+N ++ G+ +G +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+++ M +PN TY+ L+ C+ + +++ M I D TYNI++
Sbjct: 367 AAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
G CK N+++AW L + + KG SY +I GF +++++ ++ L+ +M+ GL+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 213/395 (53%), Gaps = 3/395 (0%)
Query: 278 LLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLC 337
L ME+ G D+ S++ +IN C L ++ +M G +P+ T +S++ C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 338 KTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLL 397
+ ++V +A ++ +M G PD VIY T+IDG CK+G V A LFD M + D +
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 398 TYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNM 457
TY +++ G C +G+ +A +L +M+ R + P+ I +TA+ID + K G +A L+ M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 458 VHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNI 517
+ P+V TY +L +GLC G ++ A ++L M KG ++ TYN+++NG CK+ +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 518 LQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVL 577
+ KL +M G DT TY TI+ Y ++G A E+ M + P++ T+++L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 387
Query: 578 MNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGI 637
+ G CM+ +E L + M + ++ + TYN +I C ++ +++ + +G+
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 638 TPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGF 672
PD +Y ++ G C+ R ++ L+++M + G
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 232/448 (51%), Gaps = 4/448 (0%)
Query: 192 FQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELG 251
F + L E LF K++ + S+ + LS+++ + +V+ F G
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKS-KNYDLVISLFHHMEVCG 99
Query: 252 ICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVL 311
I + SYNI+I+CLCR + A ++ +M G PDVV+ S++ING+C + +
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 312 KLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGF 371
L+ +M+ G +P+ YN+++ CK V +A + M G+ D V Y +L+ G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 372 CKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDE 431
C G + A RL +M +I+P+++T+TA+I F GK EA KL+ EM R ++PD
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 432 IVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHE 491
Y +LI+G C G + +A + + MV P+VVTY L +G CKS ++ +L E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 492 MCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE 551
M ++GL + TYN+I+ G +AG A ++ M+ P+ TY+ ++ C +
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWR 396
Query: 552 MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNP 611
+ KA L +M ++ + T+N++++G C G +ED L + + KGLKP+ +Y
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 612 LIKQHCLRNDMRTTAKIYKGMCAQGITP 639
+I C + + +Y+ M G+ P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 200/418 (47%), Gaps = 10/418 (2%)
Query: 323 KPNPYTYNSVVRLLCKTSKVVEAETILRE-------MMNQGIVPDNVIYTTLIDGFCKMG 375
K NP + R +T + L E M+ +P V ++ ++ K
Sbjct: 24 KGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83
Query: 376 NVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYT 435
N LF M I DL +Y +I C + V A + +M+ G EPD + +
Sbjct: 84 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 436 ALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRK 495
+LI+G+C+ + A L + M M P+VV Y + DG CK G + A EL M R
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 496 GLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKA 555
G++ + TYNS+V GLC +G A +LM DM + P+ T+T ++D + K G+ +A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 556 HELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQ 615
+L +M + + P V T+N L+NG CM G +++ +++L M+ KG P+ TYN LI
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 616 HCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLT 675
C + K+++ M +G+ D TYN ++QG+ +A A + M + N+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP-NIR 382
Query: 676 TSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
T Y+ L+ G + +A LFE M++ + D Y + + GN E +L
Sbjct: 383 T--YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 195/387 (50%), Gaps = 3/387 (0%)
Query: 324 PNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRL 383
P+ ++ V+ + K+ ++ M GI D Y +I+ C+ A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 384 FDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCK 443
+M PD++T +++I GFC ++ +A L +M G PD ++Y +IDG CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 444 AGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYT 503
G + A L + M + + VTY +L GLC SG A L+ +M + + N+ T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 504 YNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDML 563
+ ++++ K G +A+KL E+M PD FTY ++++ C G + +A ++L M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 564 DKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMR 623
KG P VVT+N L+NGFC S +++G KL + M ++GL + TYN +I+ +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 624 TTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALI 683
+I+ M ++ P+ TY+ILL G C +++A L + M + L ++YN +I
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 684 KGFLKRKKYLEARELFEEMRRGGLVAD 710
G K +A +LF + GL D
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%)
Query: 597 MLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARN 656
M++ P+ ++ ++ + + ++ M GI D +YNI++ C+
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 657 MKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYF 716
A + +M++ G+ + ++LI GF + + +A +L +M G D IY
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 717 FVDINFEEGNTEITLELCD 735
+D + + G +EL D
Sbjct: 180 IIDGSCKIGLVNDAVELFD 198
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P +V F+ +++ L + V+ L ++M++ G++ + YT+N V+ C +V A +I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +M+ G PD V +L++GFC+ V+ A L D+M + PD++ Y AII C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
T ++ +A F E+ +G+ P+ + YTAL++G C + A L ++M+ ++TPNV+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y+AL D K+G++ A EL EM R + +I TY+S++NGLC I +A ++ + M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
G D +Y T+++ +CK+ + +L R+M +GL + VT+N L+ GF +G ++
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
++ M G+ P+ TYN L+ C ++ I++ M + + D TY ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
+G CK ++EAW L + KG +Y ++ G + E L+ +M++ GL+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 709 ADREIYYFFVDINFEEGNTEITLELCDAAIEC 740
+ D +G+ ++ EL + C
Sbjct: 503 KN--------DCTLSDGDITLSAELIKKMLSC 526
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 237/444 (53%), Gaps = 1/444 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
KLN+A LF ++ S+ N LS + +V+ + LGI + ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL-KKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
NI+I+C C ++ A +L +M G PD V+ +++NG+C + + L+++M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G KP+ YN+++ LCKT +V +A +E+ +GI P+ V YT L++G C +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A RL +M I P+++TY+A++ F GK++EA++LF EM+ ++PD + Y++LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
G C + +A + + MV +VV+Y L +G CK+ +E +L EM ++GL
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
N TYN+++ G +AG++ +A + M+ G PD +TY ++ C +GE+ KA +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
DM + + +VT+ ++ G C +G +E+ L + KGLKP+ TY ++ C +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 620 NDMRTTAKIYKGMCAQGITPDGNT 643
+ +Y M +G+ + T
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCT 507
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 235/448 (52%), Gaps = 18/448 (4%)
Query: 192 FQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELG 251
+ V++ K E + L + +VI+ C C + + + + +LG
Sbjct: 101 YDVVISLGKKMEVLGIRNDLYTFNIVINCFCC----------CFQVSLALSILGKMLKLG 150
Query: 252 ICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVL 311
+ + +++ CR ++ +A L+ +M G PD+V+++ II+ C +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 312 KLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGF 371
+E++ KG++PN TY ++V LC +S+ +A +L +M+ + I P+ + Y+ L+D F
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 372 CKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDE 431
K G V A LF+EM ++I PD++TY+++I G CL ++ EA ++F M+ +G D
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 432 IVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHE 491
+ Y LI+G+CKA ++ L M L N VTY L G ++G+++ A E +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 492 MCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE 551
M G+ +I+TYN ++ GLC G + +A+ + EDM+ D TYTT++ CK+G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 552 MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNP 611
+ +A L + KGL+P +VT+ +M+G C G++ + E L M ++GL N T +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
Query: 612 LIKQHCLRNDMRTTAKIYKGMCAQGITP 639
D+ +A++ K M + G P
Sbjct: 511 --------GDITLSAELIKKMLSCGYAP 530
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 235/444 (52%), Gaps = 7/444 (1%)
Query: 229 RLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCS 288
+L++ D +VKS FP + +N ++ + + K L +ME+ G
Sbjct: 65 KLNDAIDLFSDMVKS-RPFPSI------VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
D+ +F+ +IN +C ++ L ++ +M G +P+ T S+V C+ ++V +A ++
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+ +M+ G PD V Y +ID CK V A+ F E+ I P+++TYTA++ G C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
+ + +A +L +M+ + + P+ I Y+AL+D + K G + +A L MV M + P++VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
Y++L +GLC ++ AN++ M KG ++ +YN+++NG CKA + +KL +M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
G +T TY T++ + ++G++ KA E M G+ P + T+N+L+ G C +G +E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+ + M ++ + + TY +I+ C + ++ + +G+ PD TY ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 649 QGHCKARNMKEAWFLHKEMVQKGF 672
G C + E L+ +M Q+G
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGL 501
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 34/420 (8%)
Query: 183 SDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGL---VISVDSCNLFLSRLSNTCDGLRM 239
+D + F+I +++ A + K+L G +++ S R + D + +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 240 VVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIIN 299
V K E+G + +YN +I LC+ ++ +A ++E +G P+VV+++ ++N
Sbjct: 178 VDK----MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 300 GYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVP 359
G C +L+ +M K + PN TY++++ K KV+EA+ + EM+ I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 360 DNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLF 419
D V Y++LI+G C + A ++FD M + D+++Y +I GFC ++ + KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 420 HEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKS 479
EM RGL + + Y LI G+ +AG + KA + M ++P++ TY L GLC +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 480 GELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTY 539
GELE A + +M ++ + L+I TY +++ G+CK G + +A L + + G PD TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 540 TTIMDAYC---------------------------KSGEMVKAHELLRDMLDKGLQPSVV 572
TT+M C G++ + EL++ ML G PS++
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLL 533
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 246 bits (628), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 280/578 (48%), Gaps = 27/578 (4%)
Query: 152 IHDFWAKPNLDASIAFTHFVERLIYTYKDWGSDPHVFDIFFQVLVEARKLNEARKLFEKL 211
I F +D + F H +E D + VL +A +L+EA ++FE L
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEA-----NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 212 LNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPEL----------GICWNTASYNI 261
V + N + M S +F E G + +YN
Sbjct: 300 EKNRRVPCTYAYNTMI-----------MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
++ CL + GK+ EA + +M+ + +P++ +++ +I+ C G+L +L + MQ G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
L PN T N +V LCK+ K+ EA + EM + PD + + +LIDG K+G V AY
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGY 441
+++++M + + + YT++I F G+ + K++ +M+ + PD + +D
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 442 CKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
KAG +K ++ + R P+ +Y+ L GL K+G EL + M +G L+
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
YN +++G CK G + +A +L+E+M+ GF P TY +++D K + +A+ L +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
K ++ +VV ++ L++GF G I++ +L+ +++KGL PN T+N L+ +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
+ ++ M TP+ TY IL+ G CK R +A+ +EM ++G +T SY
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
+I G K EA LF+ + G V D Y ++
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 247/524 (47%), Gaps = 2/524 (0%)
Query: 196 VEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWN 255
V+A KL E + + + + + + + S + M++ F + ELG
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS-AVNHSDMMLTLFQQMQELGYEPT 202
Query: 256 TASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIE 315
+ +I + G++ A LL +M+ D+V ++ I+ + +G++ K
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 316 EMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMG 375
E++ GLKP+ TY S++ +LCK +++ EA + + VP Y T+I G+ G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 376 NVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYT 435
AY L + R IP ++ Y I+ GK+ EA K+F EM + P+ Y
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYN 381
Query: 436 ALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRK 495
LID C+AG + AF L ++M L PNV T + D LCKS +L+ A + EM K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 496 GLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKA 555
+ T+ S+++GL K G + A K+ E M + ++ YT+++ + G
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 556 HELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQ 615
H++ +DM+++ P + N M+ +G E G + + + + P+A +Y+ LI
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 616 HCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLT 675
T +++ M QG D YNI++ G CK + +A+ L +EM KGF T
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 676 TSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
+Y ++I G K + EA LFEE + + + IY +D
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 246/511 (48%), Gaps = 4/511 (0%)
Query: 198 ARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTA 257
A K +EA L E+ G + SV + N L+ L + +K F E + N +
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM-GKVDEALKVFEEMKK-DAAPNLS 378
Query: 258 SYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEM 317
+YNI+I LCR GK+ A L M+ G P+V + + +++ C +L + EEM
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 318 QIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNV 377
K P+ T+ S++ L K +V +A + +M++ ++++YT+LI F G
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 378 AAAYRLFDEMRGLNIIPDL-LTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTA 436
++++ +M N PDL L T + C F G+ + +F E+ R PD Y+
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 437 LIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKG 496
LI G KAG + + L +M + Y + DG CK G++ A +LL EM KG
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 497 LQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAH 556
+ + TY S+++GL K + +A L E+ + + Y++++D + K G + +A+
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 557 ELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQH 616
+L +++ KGL P++ T+N L++ + I + + M E PN TY LI
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 617 CLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTT 676
C ++ M QG+ P +Y ++ G KA N+ EA L G +
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 677 SSYNALIKGFLKRKKYLEARELFEEMRRGGL 707
+ YNA+I+G + ++A LFEE RR GL
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 36/472 (7%)
Query: 262 MIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKG 321
M+ + K++E + ++ M P +++T+I + + +L L ++MQ G
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 322 LKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAY 381
+P + + +++R K +V A ++L EM + + D V+Y ID F K+G V A+
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 382 RLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGY 441
+ F E+ + PD +TYT++I C ++ EA ++F + P Y +I GY
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 442 CKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
AG +A+SL P+V+ Y + L K G+++ A ++ EM +K N+
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNL 377
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
TYN +++ LC+AG + A +L + M+ AG P+ T ++D CKS ++ +A + +
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
M K P +TF L++G G ++D K+ + ML+ + N+ Y LIK
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
KIYK M Q +PD N + KA +KG
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE-----------PEKG---------- 536
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLEL 733
R +FEE++ V D Y + + G T EL
Sbjct: 537 --------------RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 174/348 (50%)
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
N + C+ + G+ ++ + +++ R PD S+S +I+G G +L M+
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
+G + YN V+ CK KV +A +L EM +G P V Y ++IDG K+ +
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
AY LF+E + I +++ Y+++I GF G++ EA + E++ +GL P+ + +L+D
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
KA + +A +M ++ TPN VTY L +GLCK + A EM ++G++
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
+ +Y ++++GL KAGNI +A L + + G PD+ Y +++ + A L
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAA 607
+ +GL T VL++ + +E + + E G +AA
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 186/403 (46%), Gaps = 1/403 (0%)
Query: 326 PYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFD 385
P +YNS++ ++ + + IL EM G P ++ G K + Y +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 386 EMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAG 445
MR P YT +I F LF +M G EP ++T LI G+ K G
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 446 GMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYN 505
+ A SL + M L ++V Y D K G+++ A + HE+ GL+ + TY
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 506 SIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDK 565
S++ LCKA + +AV++ E +E P T+ Y T++ Y +G+ +A+ LL K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 566 GLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTT 625
G PSV+ +N ++ G +++ K+ + M +K PN +TYN LI C + T
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 626 AKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKG 685
++ M G+ P+ T NI++ CK++ + EA + +EM K ++ +LI G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 686 FLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE 728
K + +A +++E+M + +Y + F G E
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 196/417 (47%), Gaps = 1/417 (0%)
Query: 312 KLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGF 371
+++ EM + G P+ T +V K +K+ E +++ M P YTTLI F
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 372 CKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDE 431
+ + LF +M+ L P + +T +I GF G++ A L EM L+ D
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 432 IVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHE 491
++Y ID + K G + A+ + + L P+ VTYT++ LCK+ L+ A E+
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 492 MCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGE 551
+ + Y YN+++ G AG +A L+E G P Y I+ K G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 552 MVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNP 611
+ +A ++ +M K P++ T+N+L++ C +G ++ +L M + GL PN T N
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 612 LIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKG 671
++ + C + +++ M + TPD T+ L+ G K + +A+ ++++M+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 672 FNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTE 728
+ Y +LIK F + + +++++M D ++ ++D F+ G E
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%)
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F E + SY+I+IH L + G E + L M+ +GC D +++ +I+G+C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
G++ + +L+EEM+ KG +P TY SV+ L K ++ EA + E ++ I + VI
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
Y++LIDGF K+G + AY + +E+ + P+L T+ +++ ++ EA F M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
P+++ Y LI+G CK KAF M + P+ ++YT + GL K+G +
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIM 543
A L G + YN+++ GL + A L E+ G T ++
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 544 DAYCKS 549
D K+
Sbjct: 840 DTLHKN 845
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 1/338 (0%)
Query: 184 DPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKS 243
D + + + + +A + + R +FE++ V S ++ + L +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA-GFANETYEL 574
Query: 244 FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCY 303
F E G +T +YNI+I C+ GK+ +A+ LL +M+ +G P VV++ ++I+G
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 304 LGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVI 363
+ L L EE + K ++ N Y+S++ K ++ EA IL E+M +G+ P+
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 364 YTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEML 423
+ +L+D K + A F M+ L P+ +TY +I G C K +A + EM
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 424 GRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELE 483
+G++P I YT +I G KAG + +A +L + P+ Y A+ +GL
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 484 TANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAV 521
A L E R+GL ++ T +++ L K + QA
Sbjct: 815 DAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 240/448 (53%), Gaps = 30/448 (6%)
Query: 208 FEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHC 265
F++ YG +S SC + L N + V K E I N ++N++I+
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYK---EMIRRKIQPNVFTFNVVINA 232
Query: 266 LCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLK---LIEEMQIKGL 322
LC+ GK+ +A ++ M++ GCSP+VVS++T+I+GYC LG ++ K +++EM +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 323 KPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYR 382
PN T+N ++ K + + + +EM++Q + P+ + Y +LI+G C G ++ A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 383 LFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYC 442
+ D+M + P+L+TY A+I GFC + EA +F + G+G P +Y LID YC
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 443 KAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIY 502
K G + F+L M + P+V TY L GLC++G +E A +L ++ KGL ++
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLV 471
Query: 503 TYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDM 562
T++ ++ G C+ G +A L+++M G P TY +M YCK G + KA +R
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL-KAATNMRTQ 530
Query: 563 LDKG--LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRN 620
++K L+ +V ++NVL+ G+ G +ED LL MLEKGL PN TY ++K+
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE-IVKEE---- 585
Query: 621 DMRTTAKIYKGMCAQGITPD--GNTYNI 646
M QG PD G+ +N+
Sbjct: 586 -----------MVDQGFVPDIEGHLFNV 602
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 215/394 (54%), Gaps = 5/394 (1%)
Query: 336 LCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPD 395
L K ++ + E + +EM+ + I P+ + +I+ CK G + A + ++M+ P+
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 396 LLTYTAIICGFCL---TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFS 452
+++Y +I G+C GKM +A+ + EM+ + P+ + LIDG+ K + +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 453 LHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLC 512
+ M+ + PNV++Y +L +GLC G++ A + +M G+Q N+ TYN+++NG C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 513 KAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVV 572
K + +A+ + ++ G P T Y ++DAYCK G++ L +M +G+ P V
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 573 TFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGM 632
T+N L+ G C +G IE +KL + KGL P+ T++ L++ +C + + R A + K M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 633 CAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEM-VQKGFNLTTSSYNALIKGFLKRKK 691
G+ P TYNI+++G+CK N+K A + +M ++ + +SYN L++G+ ++ K
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 692 YLEARELFEEMRRGGLVADREIYYFFVDINFEEG 725
+A L EM GLV +R Y + ++G
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 201/404 (49%), Gaps = 25/404 (6%)
Query: 176 YTYKDW---GSDPHVF--DIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL 230
Y YK+ P+VF ++ L + K+N+AR + E + YG +V S N +
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 231 SNTCDGLRMVVKS--FTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCS 288
+M E E + N ++NI+I + + + + +M +
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P+V+S++++ING C G++ + + ++M G++PN TYN+++ CK + EA +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
+ QG VP +Y LID +CK+G + + L +EM I+PD+ TY +I G C
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
G + A+KLF ++ +GL PD + + L++GYC+ G +KA L M M L P +T
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 469 YTALADGLCKSGELETANELLHEMCR-KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
Y + G CK G L+ A + +M + + L++N+ +YN ++ G + G + A L+ +M
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 528 EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSV 571
G P+ TY E+VK +M+D+G P +
Sbjct: 568 LEKGLVPNRITY-----------EIVK-----EEMVDQGFVPDI 595
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 171/320 (53%), Gaps = 6/320 (1%)
Query: 411 KMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYT 470
+ + E ++ EM+ R ++P+ + +I+ CK G M KA + +M +PNVV+Y
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 471 ALADGLCK---SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM 527
L DG CK +G++ A+ +L EM + N+ T+N +++G K N+ ++K+ ++M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 528 EVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMI 587
P+ +Y ++++ C G++ +A + M+ G+QP+++T+N L+NGFC + M+
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 588 EDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
++ + + +G P YN LI +C + + + M +GI PD TYN L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 648 LQGHCKARNMKEAWFLHKEMVQKGF-NLTTSSYNALIKGFLKRKKYLEARELFEEMRRGG 706
+ G C+ N++ A L ++ KG +L T ++ L++G+ ++ + +A L +EM + G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 707 LVADREIYYFFVDINFEEGN 726
L Y + +EGN
Sbjct: 501 LKPRHLTYNIVMKGYCKEGN 520
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 162/335 (48%), Gaps = 4/335 (1%)
Query: 405 GFCLTGKMVEAEKLFHEM-LGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLT 463
GF G + +FH + + + + I+ L+ Y + F +
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 464 PNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKL 523
+ ++ L L K + EM R+ +Q N++T+N ++N LCK G + +A +
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 524 MEDMEVAGFHPDTFTYTTIMDAYCK---SGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
MEDM+V G P+ +Y T++D YCK +G+M KA +L++M++ + P++ TFN+L++G
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 581 FCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPD 640
F + K+ K ML++ +KPN +YN LI C + + M + G+ P+
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 641 GNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
TYN L+ G CK +KEA + + +G TT YN LI + K K + L E
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE 425
Query: 701 EMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
EM R G+V D Y + GN E +L D
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 269/546 (49%), Gaps = 13/546 (2%)
Query: 179 KDWGSDPHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLR 238
K D ++F + K+ EA KLF K+ G+ +V + N + DGL
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI-------DGLG 319
Query: 239 MVVKSFTEF------PELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVV 292
M + F E G+ +Y+I++ L R +I +A+ +L +M +G P+V+
Sbjct: 320 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 379
Query: 293 SFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREM 352
++ +I+ + G L + +++ + M KGL TYN++++ CK + AE +L+EM
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Query: 353 MNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKM 412
++ G + +T++I C +A R EM N+ P T +I G C GK
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499
Query: 413 VEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTAL 472
+A +L+ + L +G D AL+ G C+AG + +AF + ++ + V+Y L
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 473 ADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGF 532
G C +L+ A L EM ++GL+ + YTY+ ++ GL + +A++ +D + G
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619
Query: 533 HPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEK 592
PD +TY+ ++D CK+ + E +M+ K +QP+ V +N L+ +C SG + +
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679
Query: 593 LLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHC 652
L + M KG+ PN+ATY LIK + + + +++ M +G+ P+ Y L+ G+
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739
Query: 653 KARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADRE 712
K M + L +EM K + +Y +I G+ + EA L EMR G+V D
Sbjct: 740 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 799
Query: 713 IYYFFV 718
Y F+
Sbjct: 800 TYKEFI 805
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 262/524 (50%), Gaps = 18/524 (3%)
Query: 204 ARKLFEKLLNYGLVISVDSCNLFLSRL------SNTCDGLRMVVKSFTEFPELGICWNTA 257
A +F L N G+ S +CN+ L+ L C+ +V K G+ +
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--------GVSPDVY 274
Query: 258 SYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEM 317
+ I+ C+ GK++EA L +ME G +P+VV+F+T+I+G G E+M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 318 QIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNV 377
+G++P TY+ +V+ L + ++ +A +L+EM +G P+ ++Y LID F + G++
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 378 AAAYRLFDEM--RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYT 435
A + D M +GL++ TY +I G+C G+ AE+L EML G ++ +T
Sbjct: 395 NKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Query: 436 ALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRK 495
++I C A M+ ++P T L GLCK G+ A EL + K
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512
Query: 496 GLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKA 555
G ++ T N++++GLC+AG + +A ++ +++ G D +Y T++ C ++ +A
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 556 HELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQ 615
L +M+ +GL+P T+++L+ G +E+ + G+ P+ TY+ +I
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 616 HCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLT 675
C + + M ++ + P+ YN L++ +C++ + A L ++M KG +
Sbjct: 633 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692
Query: 676 TSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVD 719
+++Y +LIKG + EA+ LFEEMR GL + Y +D
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Score = 202 bits (514), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 217/438 (49%), Gaps = 10/438 (2%)
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
G+ +++YN +I C+ G+ A LL +M G + + SF+++I C
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
L+ + EM ++ + P +++ LCK K +A + + +N+G V D L+ G
Sbjct: 468 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
C+ G + A+R+ E+ G + D ++Y +I G C K+ EA EM+ RGL+PD
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
Y+ LI G +++A ++ + P+V TY+ + DG CK+ E E
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSG 550
EM K +Q N YN ++ C++G + A++L EDM+ G P++ TYT+++
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 707
Query: 551 EMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYN 610
+ +A L +M +GL+P+V + L++G+ G + E LL+ M K + PN TY
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 611 PLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQK 670
+I + ++ +++ M +GI PD TY + G+ K + EA+ K
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF--------K 819
Query: 671 GFNLTTSSYNALIKGFLK 688
G + +Y A+I+G+ K
Sbjct: 820 GSD--EENYAAIIEGWNK 835
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 211/449 (46%), Gaps = 1/449 (0%)
Query: 285 RGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVE 344
+G P + + ++ E Q+ + + + KG+ P+ Y + + + CK KV E
Sbjct: 233 KGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEE 291
Query: 345 AETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIIC 404
A + +M G+ P+ V + T+IDG G A+ ++M + P L+TY+ ++
Sbjct: 292 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 351
Query: 405 GFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTP 464
G ++ +A + EM +G P+ IVY LID + +AG + KA + + MV L+
Sbjct: 352 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 411
Query: 465 NVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLM 524
TY L G CK+G+ + A LL EM G +N ++ S++ LC A++ +
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471
Query: 525 EDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMS 584
+M + P TT++ CK G+ KA EL L+KG T N L++G C +
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531
Query: 585 GMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTY 644
G +++ ++ K +L +G + +YN LI C + + M +G+ PD TY
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 645 NILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRR 704
+IL+ G ++EA + + G +Y+ +I G K ++ E +E F+EM
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 705 GGLVADREIYYFFVDINFEEGNTEITLEL 733
+ + +Y + G + LEL
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 202/421 (47%), Gaps = 12/421 (2%)
Query: 302 CYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTS---KVVEAETILREMMNQGIV 358
CYL L + + KG+ P+ T N ++ L + + K EA +++ +G+
Sbjct: 220 CYLA-----LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEA----FDVVCKGVS 270
Query: 359 PDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKL 418
PD ++TT I+ FCK G V A +LF +M + P+++T+ +I G + G+ EA
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 419 FHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCK 478
+M+ RG+EP I Y+ L+ G +A + A+ + M PNV+ Y L D +
Sbjct: 331 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Query: 479 SGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFT 538
+G L A E+ M KGL L TYN+++ G CK G A +L+++M GF+ + +
Sbjct: 391 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 450
Query: 539 YTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWML 598
+T+++ C A + +ML + + P L++G C G +L L
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 510
Query: 599 EKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMK 658
KG + T N L+ C + +I K + +G D +YN L+ G C + +
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 659 EAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFV 718
EA+ EMV++G +Y+ LI G K EA + +++ +R G++ D Y +
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 719 D 719
D
Sbjct: 631 D 631
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
+ +KG+ PS T N+L+ + + + + KG+ P+ + I C
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 288
Query: 622 MRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNA 681
+ K++ M G+ P+ T+N ++ G EA+ ++MV++G T +Y+
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 682 LIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAI 738
L+KG + K+ +A + +EM + G + +Y +D E G+ +E+ D +
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 228/426 (53%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P ++ F+ +++ + V+ L E+MQI G+ P T N V+ +C +S+ A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G PD V +T+L++G+C + A LFD++ G+ P+++TYT +I C
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
+ A +LF++M G P+ + Y AL+ G C+ G A L +M+ R+ PNV+T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+TAL D K G+L A EL + M + + +++TY S++NGLC G + +A ++ ME
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
G +P+ YTT++ +CKS + ++ +M KG+ + +T+ VL+ G+C+ G +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILL 648
+++ M + P+ TYN L+ C + I++ M + + + TY I++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 649 QGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLV 708
QG CK +++A+ L + KG +Y +I GF +R EA LF++M+ G +
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 709 ADREIY 714
+ +Y
Sbjct: 501 PNESVY 506
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 227/445 (51%), Gaps = 1/445 (0%)
Query: 200 KLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASY 259
+ N+A LF ++++ + S+ LS ++ + +V+ F + LGI +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKM-NRYDVVISLFEQMQILGIPPLLCTC 121
Query: 260 NIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQI 319
NI++HC+C + A L +M G PD+V+F++++NGYC+ ++ + L +++
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 320 KGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAA 379
G KPN TY +++R LCK + A + +M G P+ V Y L+ G C++G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 380 AYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALID 439
A L +M I P+++T+TA+I F GK++EA++L++ M+ + PD Y +LI+
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 440 GYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQL 499
G C G + +A + M PN V YT L G CKS +E ++ +EM +KG+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 500 NIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELL 559
N TY ++ G C G A ++ M PD TY ++D C +G++ KA +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 560 RDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLR 619
M + + ++VT+ +++ G C G +ED L + KG+KPN TY +I C R
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 620 NDMRTTAKIYKGMCAQGITPDGNTY 644
+ ++K M G P+ + Y
Sbjct: 482 GLIHEADSLFKKMKEDGFLPNESVY 506
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 189/377 (50%)
Query: 328 TYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEM 387
+Y ++R + +A + M++ +P + +T L+ KM LF++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 388 RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGM 447
+ L I P L T ++ CL+ + A +M+ G EPD + +T+L++GYC +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 448 KKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSI 507
+ A +L + ++ M PNVVTYT L LCK+ L A EL ++M G + N+ TYN++
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 508 VNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGL 567
V GLC+ G A L+ DM P+ T+T ++DA+ K G++++A EL M+ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 568 QPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAK 627
P V T+ L+NG CM G++++ ++ M G PN Y LI C + K
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 628 IYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFL 687
I+ M +G+ + TY +L+QG+C A + +M + +YN L+ G
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 688 KRKKYLEARELFEEMRR 704
K +A +FE MR+
Sbjct: 410 CNGKVEKALMIFEYMRK 426
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%)
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
P +T ++ K L M G+ P + T N++M+ C+S
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
L M++ G +P+ T+ L+ +C N + ++ + G P+ TY L++ CK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREI 713
R++ A L +M G +YNAL+ G + ++ +A L +M + + +
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 714 YYFFVDINFEEGNTEITLELCDAAIE 739
+ +D + G EL + I+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQ 286
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 172/640 (26%), Positives = 301/640 (47%), Gaps = 72/640 (11%)
Query: 126 EPILEARCIVVQISVAAKDLKTAHGLIHDFWAKPNLDASIAFTHFVERLIYT-YKDWGSD 184
E I E +++ S+ L + ++ F ++D AF F +L+ + + +
Sbjct: 56 EEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDK--AFPQF--QLVRSRFPENKPS 111
Query: 185 PHVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL--SNTCDGLRMVVK 242
+++++ + ++ R++ L++ ++ G+ + NL + L S+ D R +
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL-- 169
Query: 243 SFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYC 302
F E PE G N ++ I++ C+ G + LL ME G P+ V ++TI++ +C
Sbjct: 170 -FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 303 YLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIV---- 358
G K++E+M+ +GL P+ T+NS + LCK KV++A I +M +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 359 PDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKL 418
P+++ Y ++ GFCK+G + A LF+ +R + + L +Y + G GK +EAE +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 419 FHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCK 478
+M +G+ P Y L+DG CK G + A ++ M + P+ VTY L G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 479 SGELETANELLHEMCR-----------------------------------KGLQLNIYT 503
G+++ A LL EM R KG L+ T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 504 YNSIVNGLCKAGNILQAVKLMEDMEVAGFH-----------------------PDTFTYT 540
N IV+GLC +G + +A+++++ M V G PD TY+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 541 TIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEK 600
T+++ CK+G +A L +M+ + LQP V +N+ ++ FC G I ++LK M +K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 601 GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEA 660
G + TYN LI ++N + + M +GI+P+ TYN +Q C+ +++A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648
Query: 661 WFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFE 700
L EM+QK S+ LI+ F K + A+E+FE
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 150/611 (24%), Positives = 283/611 (46%), Gaps = 41/611 (6%)
Query: 173 RLIYTYKDWGSDPH--VFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRL 230
L+ + +G P+ +++ + +++ K+ EK+ GLV + + N SR+
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN---SRI 259
Query: 231 SNTCDGLRMV----VKSFTEFPE-LGICW-NTASYNIMIHCLCRFGKIKEAHLLLLQMEL 284
S C +++ + S E E LG+ N+ +YN+M+ C+ G +++A L +
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 285 RGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVE 344
+ S++ + G G+ ++++M KG+ P+ Y+YN ++ LCK + +
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 345 AETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIIC 404
A+TI+ M G+ PD V Y L+ G+C +G V AA L EM N +P+ T ++
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 405 GFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSL----------- 453
G++ EAE+L +M +G D + ++DG C +G + KA +
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499
Query: 454 ------------HNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNI 501
++++ P+++TY+ L +GLCK+G A L EM + LQ +
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDS 559
Query: 502 YTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRD 561
YN ++ CK G I A ++++DME G H TY +++ ++ + H L+ +
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE 619
Query: 562 MLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRND 621
M +KG+ P++ T+N + C +ED LL M++K + PN ++ LI+ C D
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 622 MRTTAKIYK---GMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSS 678
++++ +C Q Y+++ A + +A L + ++ +GF L T
Sbjct: 680 FDMAQEVFETAVSICGQ----KEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 679 YNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAI 738
Y L++ K+ + A + +M G D +D + GN + D +
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Query: 739 ECYLVGKATDE 749
E VG+ ++
Sbjct: 796 EMASVGEVANK 806
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 232/430 (53%), Gaps = 3/430 (0%)
Query: 281 QMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTS 340
+++ G S D+ + + ++N +C + + +M G +P+ T+ S++ C +
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 341 KVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYT 400
++ EA +++ +M+ GI PD V+YTT+ID CK G+V A LFD+M I PD++ YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 401 AIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHM 460
+++ G C +G+ +A+ L M R ++PD I + ALID + K G A L+N M+ M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 461 RLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQA 520
+ PN+ TYT+L +G C G ++ A ++ + M KG ++ Y S++NG CK + A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 521 VKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNG 580
+K+ +M G +T TYTT++ + + G+ A E+ M+ +G+ P++ T+NVL++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 581 FCMSGMIEDGEKLLKWMLEK---GLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGI 637
C +G ++ + + M ++ G+ PN TYN L+ C + +++ M + +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 638 TPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARE 697
TY I++QG CKA +K A L + KG +Y +I G + EA
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 698 LFEEMRRGGL 707
LF +M+ G+
Sbjct: 517 LFRKMKEDGV 526
Score = 239 bits (610), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 233/440 (52%), Gaps = 3/440 (0%)
Query: 289 PDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETI 348
P ++ F+ ++N + + V+ L + +QI G+ + YT N ++ C++S+ A +
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 349 LREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCL 408
L +MM G PD V +T+LI+GFC + A + ++M + I PD++ YT II C
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 409 TGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVT 468
G + A LF +M G+ PD ++YT+L++G C +G + A SL M ++ P+V+T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 469 YTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDME 528
+ AL D K G+ A EL +EM R + NI+TY S++NG C G + +A ++ ME
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 529 VAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIE 588
G PD YT++++ +CK ++ A ++ +M KGL + +T+ L+ GF G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 589 DGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQ---GITPDGNTYN 645
+++ M+ +G+ PN TYN L+ C ++ I++ M + G+ P+ TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 646 ILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRG 705
+LL G C +++A + ++M ++ ++ +Y +I+G K K A LF +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 706 GLVADREIYYFFVDINFEEG 725
G+ + Y + F EG
Sbjct: 490 GVKPNVVTYTTMISGLFREG 509
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 187/377 (49%)
Query: 328 TYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEM 387
Y ++R + + EA + M+ +P + +T L++ KM L D +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 388 RGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGM 447
+ + + DL T ++ FC + + A +M+ G EPD + +T+LI+G+C M
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 448 KKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSI 507
++A S+ N MV M + P+VV YT + D LCK+G + A L +M G++ ++ Y S+
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 508 VNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGL 567
VNGLC +G A L+ M PD T+ ++DA+ K G+ + A EL +M+ +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 568 QPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAK 627
P++ T+ L+NGFCM G +++ ++ M KG P+ Y LI C + K
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 628 IYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFL 687
I+ M +G+T + TY L+QG + A + MV +G +YN L+
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 688 KRKKYLEARELFEEMRR 704
K +A +FE+M++
Sbjct: 399 YNGKVKKALMIFEDMQK 415
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 217/477 (45%), Gaps = 51/477 (10%)
Query: 98 DHLIWVLMDIRSDYRLVLDFFDWACLRREPILEARCIVVQISVAAK-DLKTAHGLIHDFW 156
DHL +M + D + C +P L + + + + + D+ T LI+ F
Sbjct: 96 DHL--QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 157 AKPNLDASIAFTHFVERLIYTYKDWGSDPHV--FDIFFQVLVEARKLNEARKLFEKLLNY 214
++ +++ V +++ + G P V + L + +N A LF+++ NY
Sbjct: 154 LGNRMEEAMSM---VNQMV----EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 215 GLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKE 274
G+ V Y +++ LC G+ ++
Sbjct: 207 GIRPDV------------------------------------VMYTSLVNGLCNSGRWRD 230
Query: 275 AHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVR 334
A LL M R PDV++F+ +I+ + G+ +L EM + PN +TY S++
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 335 LLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIP 394
C V EA + M +G PD V YT+LI+GFCK V A ++F EM +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 395 DLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLH 454
+ +TYT +I GF GK A+++F M+ RG+ P+ Y L+ C G +KKA +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 455 NNMVHMRL---TPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGL 511
+M + PN+ TY L GLC +G+LE A + +M ++ + + I TY I+ G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 512 CKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQ 568
CKAG + AV L + G P+ TYTT++ + G +AH L R M + G+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 154/320 (48%)
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
EA LF M+ P I +T L++ K +L +++ M ++ ++ T L
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
+ C+S + A+ L +M + G + +I T+ S++NG C + +A+ ++ M G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
PD YTTI+D+ CK+G + A L M + G++P VV + L+NG C SG D + L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
L+ M ++ +KP+ T+N LI ++Y M I P+ TY L+ G C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREI 713
+ EA + M KG +Y +LI GF K KK +A ++F EM + GL +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 714 YYFFVDINFEEGNTEITLEL 733
Y + + G + E+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEV 374
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 636 GITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEA 695
G++ D T N+L+ C++ A +M++ GF ++ +LI GF + EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 696 RELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCD 735
+ +M G+ D +Y +D + G+ L L D
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 230/446 (51%), Gaps = 1/446 (0%)
Query: 294 FSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMM 353
+ IIN Y L + EM G P +N ++ + +S + + E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 354 NQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMV 413
++ +V D + LI G C+ G + ++ L E+ P+++ YT +I G C G++
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 414 EAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALA 473
+A+ LF EM GL +E YT LI+G K G K+ F ++ M + PN+ TY +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 474 DGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFH 533
+ LCK G + A ++ EM +G+ NI TYN+++ GLC+ + +A K+++ M+ G +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 534 PDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKL 593
P+ TY T++D +C G++ KA L RD+ +GL PS+VT+N+L++GFC G K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 594 LKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCK 653
+K M E+G+KP+ TY LI ++M ++ M G+ PD +TY++L+ G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 654 ARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREI 713
M EA L K MV+K YN +I G+ K A +L +EM L +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 714 YYFFVDINFEEGNTEITLELCDAAIE 739
Y + +++ +E ++ L + I+
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMID 541
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 243/462 (52%), Gaps = 2/462 (0%)
Query: 186 HVFDIFFQVLVEARKLNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFT 245
++++ V+++ LN + F ++++ G V + N L+ + + + SF
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW--SFF 152
Query: 246 EFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLG 305
+ + + S+ I+I C G+I+++ LL+++ G SP+VV ++T+I+G C G
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 306 ELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYT 365
E+++ L EM GL N TY ++ L K + + +M G+ P+ Y
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 366 TLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGR 425
+++ CK G A+++FDEMR + +++TY +I G C K+ EA K+ +M
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 426 GLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETA 485
G+ P+ I Y LIDG+C G + KA SL ++ L+P++VTY L G C+ G+ A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 486 NELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDA 545
+++ EM +G++ + TY +++ ++ N+ +A++L ME G PD TY+ ++
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 546 YCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPN 605
+C G+M +A L + M++K +P+ V +N ++ G+C G KLLK M EK L PN
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Query: 606 AATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNIL 647
A+Y +I+ C + ++ + M GI P + +++
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 211/388 (54%)
Query: 290 DVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETIL 349
DV SF +I G C GE+++ L+ E+ G PN Y +++ CK ++ +A+ +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 350 REMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLT 409
EM G+V + YT LI+G K G + ++++M+ + P+L TY ++ C
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 410 GKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTY 469
G+ +A ++F EM RG+ + + Y LI G C+ + +A + + M + PN++TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 470 TALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEV 529
L DG C G+L A L ++ +GL ++ TYN +V+G C+ G+ A K++++ME
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 530 AGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIED 589
G P TYT ++D + +S M KA +L M + GL P V T++VL++GFC+ G + +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 590 GEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQ 649
+L K M+EK +PN YN +I +C K+ K M + + P+ +Y +++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 650 GHCKARNMKEAWFLHKEMVQKGFNLTTS 677
CK R KEA L ++M+ G + +TS
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 209/381 (54%)
Query: 327 YTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDE 386
Y++ +++ C+ ++ ++ +L E+ G P+ VIYTTLIDG CK G + A LF E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 387 MRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGG 446
M L ++ + TYT +I G G + +++ +M G+ P+ Y +++ CK G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 447 MKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNS 506
K AF + + M ++ N+VTY L GLC+ +L AN+++ +M G+ N+ TYN+
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 507 IVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKG 566
+++G C G + +A+ L D++ G P TY ++ +C+ G+ A +++++M ++G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 567 LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTA 626
++PS VT+ +L++ F S +E +L M E GL P+ TY+ LI C++ M +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 627 KIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGF 686
+++K M + P+ YN ++ G+CK + A L KEM +K +SY +I+
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 687 LKRKKYLEARELFEEMRRGGL 707
K +K EA L E+M G+
Sbjct: 524 CKERKSKEAERLVEKMIDSGI 544
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 195/379 (51%), Gaps = 13/379 (3%)
Query: 174 LIYTYKDWGSDPHVFDIFFQVLVEA----RKLNEARKLFEKLLNYGLVISVDSCNLFLSR 229
L+ ++G P+V + + L++ ++ +A+ LF ++ GLV + + + ++
Sbjct: 185 LLIELTEFGFSPNV--VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 230 LSNTC---DGLRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRG 286
L G M + + E G+ N +YN +++ LC+ G+ K+A + +M RG
Sbjct: 243 LFKNGVKKQGFEM----YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 287 CSPDVVSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAE 346
S ++V+++T+I G C +L K++++M+ G+ PN TYN+++ C K+ +A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 347 TILREMMNQGIVPDNVIYTTLIDGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGF 406
++ R++ ++G+ P V Y L+ GFC+ G+ + A ++ EM I P +TYT +I F
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 407 CLTGKMVEAEKLFHEMLGRGLEPDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNV 466
+ M +A +L M GL PD Y+ LI G+C G M +A L +MV PN
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 467 VTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMED 526
V Y + G CK G A +LL EM K L N+ +Y ++ LCK +A +L+E
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 527 MEVAGFHPDTFTYTTIMDA 545
M +G P T + I A
Sbjct: 539 MIDSGIDPSTSILSLISRA 557
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 254/526 (48%), Gaps = 37/526 (7%)
Query: 251 GICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRV 310
G +N ++NI++ LCR + +A LL +M PDV S++T+I G+C EL++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 311 LKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDG 370
L+L EM+ G + T+ ++ CK K+ EA L+EM G+ D V+YT+LI G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 371 FCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPD 430
FC G + LFDE+ P +TY +I GFC G++ EA ++F M+ RG+ P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 431 EIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLH 490
YT LIDG C G K+A L N M+ PN VTY + + LCK G + A E++
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 491 EMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDM--EVAGFHPDTFTYTTIMDAYCK 548
M ++ + + TYN ++ GLC G++ +A KL+ M + + PD +Y ++ CK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 549 -----------------------------------SGEMVKAHELLRDMLDKGLQPSVVT 573
+G++ KA EL + + D + + T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 574 FNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIYKGMC 633
+ +++GFC +GM+ + LL M L+P+ YN L+ C + ++++ M
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 634 AQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKRKKYL 693
PD ++NI++ G KA ++K A L M + G + +Y+ LI FLK
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 694 EARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
EA F++M G D I + +G T+ EL ++
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 234/474 (49%), Gaps = 2/474 (0%)
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
N S + ++ C + K A +L M RG + +V + + ++ G C E + + L+
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 315 EEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLIDGFCKM 374
EM+ L P+ ++YN+V+R C+ ++ +A + EM G V + LID FCK
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 375 GNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLEPDEIVY 434
G + A EM+ + + DL+ YT++I GFC G++ + LF E+L RG P I Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
LI G+CK G +K+A + M+ + PNV TYT L DGLC G+ + A +LL+ M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
K + N TYN I+N LCK G + AV+++E M+ PD TY ++ C G++ +
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 555 AHELLRDMLDKG--LQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPL 612
A +LL ML P V+++N L++G C + + ++EK + T N L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 613 IKQHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGF 672
+ D+ +++K + I + +TY ++ G CK + A L +M
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 673 NLTTSSYNALIKGFLKRKKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGN 726
+ YN L+ K +A LFEEM+R D + +D + + G+
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 212/455 (46%), Gaps = 39/455 (8%)
Query: 234 CDG--LRMVVKSFTEFPELGICWNTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDV 291
C+G L ++ E G W+ ++ I+I C+ GK+ EA L +M+ G D+
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247
Query: 292 VSFSTIINGYCYLGELQRVLKLIEEMQIKGLKPNPYTYNSVVRLLCKTSKVVEAETILRE 351
V ++++I G+C GEL R L +E+ +G P TYN+++R CK ++ EA I
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307
Query: 352 MMNQGIVPDNVIYTTLIDGFCKMGN----------------------------------- 376
M+ +G+ P+ YT LIDG C +G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 377 VAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRG--LEPDEIVY 434
VA A + + M+ PD +TY ++ G C G + EA KL + ML +PD I Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 435 TALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCR 494
ALI G CK + +A +++ +V + VT L + K+G++ A EL ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 495 KGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVK 554
+ N TY ++++G CK G + A L+ M V+ P F Y ++ + CK G + +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 555 AHELLRDMLDKGLQPSVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIK 614
A L +M P VV+FN++++G +G I+ E LL M GL P+ TY+ LI
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 615 QHCLRNDMRTTAKIYKGMCAQGITPDGNTYNILLQ 649
+ + + M G PD + + +L+
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 34/439 (7%)
Query: 144 DLKTAHGLIHDFWAKPNLDASIA-FTHFVERLIYTYKDWGSDP--HVFDIFFQVLVEARK 200
DL LI F LD A F +ER G P ++ + + +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLER--------GDSPCAITYNTLIRGFCKLGQ 297
Query: 201 LNEARKLFEKLLNYGLVISVDSCNLFLSRLSNTCDGLRMVVKSFTEFPELGICW------ 254
L EA ++FE ++ G+ +V + + DGL V K+ L +
Sbjct: 298 LKEASEIFEFMIERGVRPNVYT-------YTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 255 NTASYNIMIHCLCRFGKIKEAHLLLLQMELRGCSPDVVSFSTIINGYCYLGELQRVLKLI 314
N +YNI+I+ LC+ G + +A ++ M+ R PD ++++ ++ G C G+L KL+
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 315 EEMQIKGLKPNPYT------YNSVVRLLCKTSKVVEAETILREMMNQGIVPDNVIYTTLI 368
M LK + YT YN+++ LCK +++ +A I ++ + D V L+
Sbjct: 411 YLM----LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 369 DGFCKMGNVAAAYRLFDEMRGLNIIPDLLTYTAIICGFCLTGKMVEAEKLFHEMLGRGLE 428
+ K G+V A L+ ++ I+ + TYTA+I GFC TG + A+ L +M L+
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 429 PDEIVYTALIDGYCKAGGMKKAFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANEL 488
P Y L+ CK G + +A+ L M P+VV++ + DG K+G++++A L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 489 LHEMCRKGLQLNIYTYNSIVNGLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCK 548
L M R GL +++TY+ ++N K G + +A+ + M +GF PD +++
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 549 SGEMVKAHELLRDMLDKGL 567
GE K EL++ ++DK +
Sbjct: 647 QGETDKLTELVKKLVDKDI 665
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 450 AFSLHNNMVHMRLTPNVVTYTALADGLCKSGELETANELLHEMCRKGLQLNIYTYNSIVN 509
AFS + M+ N V+ + L + + + A +L M ++G N+Y +N ++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 510 GLCKAGNILQAVKLMEDMEVAGFHPDTFTYTTIMDAYCKSGEMVKAHELLRDMLDKGLQP 569
GLC+ +AV L+ +M PD F+Y T++ +C+ E+ KA EL +M G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 570 SVVTFNVLMNGFCMSGMIEDGEKLLKWMLEKGLKPNAATYNPLIKQHCLRNDMRTTAKIY 629
S+VT+ +L++ FC +G +++ LK
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKE--------------------------------- 237
Query: 630 KGMCAQGITPDGNTYNILLQGHCKARNMKEAWFLHKEMVQKGFNLTTSSYNALIKGFLKR 689
M G+ D Y L++G C + L E++++G + +YN LI+GF K
Sbjct: 238 --MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 690 KKYLEARELFEEMRRGGLVADREIYYFFVDINFEEGNTEITLELCDAAIE 739
+ EA E+FE M G+ + Y +D G T+ L+L + IE
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 280,256,820
Number of Sequences: 539616
Number of extensions: 11919372
Number of successful extensions: 47544
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 33182
Number of HSP's gapped (non-prelim): 3521
length of query: 751
length of database: 191,569,459
effective HSP length: 125
effective length of query: 626
effective length of database: 124,117,459
effective search space: 77697529334
effective search space used: 77697529334
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)