Query 004475
Match_columns 751
No_of_seqs 360 out of 3847
Neff 10.5
Searched_HMMs 29240
Date Tue Mar 26 02:18:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 2.3E-54 7.9E-59 498.6 53.3 608 6-743 37-728 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 5.9E-52 2E-56 481.0 55.1 588 5-741 64-740 (741)
3 2z3z_A Dipeptidyl aminopeptida 100.0 7E-51 2.4E-55 469.2 55.3 586 6-740 45-706 (706)
4 1xfd_A DIP, dipeptidyl aminope 100.0 7.1E-52 2.4E-56 479.1 45.5 609 5-741 37-722 (723)
5 3azo_A Aminopeptidase; POP fam 100.0 3.6E-49 1.2E-53 451.4 61.1 580 32-743 25-651 (662)
6 3o4h_A Acylamino-acid-releasin 100.0 2E-50 6.8E-55 454.0 48.7 537 32-742 23-581 (582)
7 1z68_A Fibroblast activation p 100.0 4.7E-50 1.6E-54 463.1 50.2 602 5-741 36-719 (719)
8 2bkl_A Prolyl endopeptidase; m 100.0 4.5E-48 1.5E-52 442.9 58.9 588 35-750 72-685 (695)
9 2xdw_A Prolyl endopeptidase; a 100.0 7.5E-48 2.6E-52 442.5 58.9 587 33-742 76-706 (710)
10 1yr2_A Prolyl oligopeptidase; 100.0 1.3E-46 4.4E-51 433.7 56.3 583 35-745 111-722 (741)
11 3iuj_A Prolyl endopeptidase; h 100.0 2.1E-46 7.2E-51 427.6 57.4 582 35-743 81-687 (693)
12 2xe4_A Oligopeptidase B; hydro 100.0 6.5E-44 2.2E-48 408.9 54.4 575 33-743 119-744 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 4.4E-34 1.5E-38 318.6 47.9 509 157-742 156-708 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 1.1E-25 3.7E-30 239.1 31.9 351 4-462 10-386 (388)
15 4a5s_A Dipeptidyl peptidase 4 99.9 1.6E-23 5.6E-28 241.2 31.5 334 32-467 18-408 (740)
16 3c5m_A Oligogalacturonate lyas 99.9 1.2E-22 4E-27 216.2 29.0 324 33-466 38-390 (396)
17 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-22 1.6E-26 230.1 35.3 329 32-468 38-423 (741)
18 3hxk_A Sugar hydrolase; alpha- 99.9 3.7E-23 1.3E-27 208.2 22.6 238 485-745 18-271 (276)
19 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.9E-22 6.5E-27 215.2 29.0 283 5-413 93-397 (415)
20 1k32_A Tricorn protease; prote 99.9 2.9E-22 9.8E-27 239.9 33.1 376 5-468 33-469 (1045)
21 3f67_A Putative dienelactone h 99.9 3.2E-23 1.1E-27 204.0 18.6 219 478-739 3-241 (241)
22 3pe7_A Oligogalacturonate lyas 99.9 7.4E-22 2.5E-26 209.4 30.0 309 60-471 9-340 (388)
23 1xfd_A DIP, dipeptidyl aminope 99.9 5.2E-22 1.8E-26 229.0 29.4 338 32-467 18-403 (723)
24 3bxp_A Putative lipase/esteras 99.9 1.5E-22 5.1E-27 203.9 21.2 236 480-740 3-271 (277)
25 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 2.7E-22 9.3E-27 212.1 23.8 231 479-743 125-367 (386)
26 4ao6_A Esterase; hydrolase, th 99.9 1.7E-22 5.7E-27 200.5 20.8 207 482-741 32-259 (259)
27 3ebl_A Gibberellin receptor GI 99.9 7E-22 2.4E-26 206.1 25.3 245 477-745 60-356 (365)
28 2i3d_A AGR_C_3351P, hypothetic 99.9 3.1E-21 1.1E-25 190.8 28.3 213 483-745 25-238 (249)
29 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-21 3.7E-26 209.4 26.7 248 5-363 159-409 (415)
30 2ojh_A Uncharacterized protein 99.9 1E-20 3.6E-25 191.9 29.5 261 3-372 20-292 (297)
31 3ga7_A Acetyl esterase; phosph 99.9 2.8E-21 9.6E-26 199.3 24.9 234 478-742 60-324 (326)
32 3k2i_A Acyl-coenzyme A thioest 99.9 1.5E-21 5.1E-26 208.7 21.0 230 481-743 135-414 (422)
33 1z68_A Fibroblast activation p 99.9 2.4E-21 8.4E-26 223.1 24.0 330 33-467 18-402 (719)
34 3hlk_A Acyl-coenzyme A thioest 99.9 1.7E-21 5.8E-26 209.1 21.0 221 493-743 160-430 (446)
35 3fcy_A Xylan esterase 1; alpha 99.9 1.3E-21 4.6E-26 203.8 19.7 226 477-738 78-343 (346)
36 3ksr_A Putative serine hydrola 99.9 1.3E-21 4.4E-26 198.5 18.7 231 479-742 4-243 (290)
37 2wtm_A EST1E; hydrolase; 1.60A 99.9 7.2E-21 2.5E-25 188.4 23.3 226 484-741 4-250 (251)
38 3bjr_A Putative carboxylestera 99.9 4.5E-22 1.6E-26 201.0 14.6 239 477-739 15-282 (283)
39 3fak_A Esterase/lipase, ESTE5; 99.9 2.1E-21 7.2E-26 199.4 19.5 221 493-743 66-311 (322)
40 3trd_A Alpha/beta hydrolase; c 99.9 7.2E-21 2.5E-25 182.4 22.1 203 480-736 5-207 (208)
41 2o2g_A Dienelactone hydrolase; 99.9 3.3E-21 1.1E-25 187.0 19.6 208 479-741 10-223 (223)
42 1zi8_A Carboxymethylenebutenol 99.9 1.3E-21 4.5E-26 191.7 16.8 207 482-742 4-234 (236)
43 1l7a_A Cephalosporin C deacety 99.9 3.8E-21 1.3E-25 197.8 20.9 229 477-741 52-317 (318)
44 3doh_A Esterase; alpha-beta hy 99.9 5.9E-21 2E-25 201.1 22.5 226 480-739 143-378 (380)
45 1vlq_A Acetyl xylan esterase; 99.9 3.7E-21 1.2E-25 199.7 20.6 232 476-742 63-336 (337)
46 2gop_A Trilobed protease; beta 99.9 1E-19 3.6E-24 189.6 30.4 307 31-472 15-342 (347)
47 3i6y_A Esterase APC40077; lipa 99.9 1.2E-21 4.2E-26 197.5 14.8 237 481-741 17-279 (280)
48 2fuk_A XC6422 protein; A/B hyd 99.9 2.1E-20 7.3E-25 180.9 22.6 211 479-742 8-218 (220)
49 4fbl_A LIPS lipolytic enzyme; 99.9 6.9E-21 2.4E-25 191.7 19.1 202 512-739 51-281 (281)
50 3e4d_A Esterase D; S-formylglu 99.9 2.3E-21 7.8E-26 195.3 14.9 235 481-741 15-278 (278)
51 2z3z_A Dipeptidyl aminopeptida 99.9 9.9E-20 3.4E-24 209.2 30.3 309 5-405 101-437 (706)
52 3c5m_A Oligogalacturonate lyas 99.9 9.7E-20 3.3E-24 193.6 27.1 306 4-409 59-390 (396)
53 2hdw_A Hypothetical protein PA 99.9 3.9E-20 1.3E-24 194.5 23.5 236 477-740 64-367 (367)
54 2o7r_A CXE carboxylesterase; a 99.9 6.4E-21 2.2E-25 197.8 16.7 279 437-742 7-333 (338)
55 3fcx_A FGH, esterase D, S-form 99.8 2.6E-21 8.9E-26 195.3 12.9 240 481-741 16-281 (282)
56 3ain_A 303AA long hypothetical 99.8 9.8E-20 3.4E-24 186.7 24.8 234 477-741 61-321 (323)
57 3ls2_A S-formylglutathione hyd 99.8 4.9E-21 1.7E-25 193.1 14.7 237 481-741 15-279 (280)
58 3qh4_A Esterase LIPW; structur 99.8 1.2E-20 4.1E-25 193.2 17.5 234 477-741 56-316 (317)
59 1k32_A Tricorn protease; prote 99.8 3.8E-19 1.3E-23 212.8 32.8 247 5-371 226-491 (1045)
60 4e15_A Kynurenine formamidase; 99.8 3.8E-21 1.3E-25 196.2 12.8 220 491-737 65-298 (303)
61 3hju_A Monoglyceride lipase; a 99.8 1.3E-19 4.3E-24 188.6 24.6 234 479-742 32-314 (342)
62 2hm7_A Carboxylesterase; alpha 99.8 3.9E-20 1.3E-24 189.3 20.0 235 477-741 44-310 (310)
63 2zsh_A Probable gibberellin re 99.8 8.6E-20 2.9E-24 190.2 22.7 238 477-738 68-350 (351)
64 1lzl_A Heroin esterase; alpha/ 99.8 9.1E-20 3.1E-24 187.7 21.5 238 477-743 47-319 (323)
65 3h04_A Uncharacterized protein 99.8 3.3E-19 1.1E-23 178.7 25.2 225 481-741 3-274 (275)
66 2wir_A Pesta, alpha/beta hydro 99.8 5.4E-20 1.8E-24 188.6 19.4 234 478-741 48-312 (313)
67 3pfb_A Cinnamoyl esterase; alp 99.8 3.2E-19 1.1E-23 178.6 24.4 228 480-739 21-267 (270)
68 3k6k_A Esterase/lipase; alpha/ 99.8 7.6E-20 2.6E-24 187.9 19.9 230 477-742 56-310 (322)
69 1jjf_A Xylanase Z, endo-1,4-be 99.8 7.5E-19 2.6E-23 175.6 25.6 221 479-741 30-262 (268)
70 1jfr_A Lipase; serine hydrolas 99.8 3.2E-19 1.1E-23 177.7 22.7 205 479-743 23-234 (262)
71 4h0c_A Phospholipase/carboxyle 99.8 5.5E-20 1.9E-24 175.1 16.3 184 511-737 21-209 (210)
72 2c7b_A Carboxylesterase, ESTE1 99.8 8.5E-20 2.9E-24 187.0 18.6 233 478-741 45-309 (311)
73 1mpx_A Alpha-amino acid ester 99.8 1.2E-19 4.2E-24 201.8 21.3 245 479-743 23-357 (615)
74 2uz0_A Esterase, tributyrin es 99.8 1.2E-19 4E-24 181.1 18.3 241 479-742 5-258 (263)
75 2pbl_A Putative esterase/lipas 99.8 1.7E-19 5.8E-24 179.8 18.9 202 482-721 39-246 (262)
76 3pe6_A Monoglyceride lipase; a 99.8 1.3E-18 4.3E-23 177.1 25.7 228 485-742 21-296 (303)
77 1auo_A Carboxylesterase; hydro 99.8 5.8E-19 2E-23 170.4 21.7 187 510-741 12-218 (218)
78 3vis_A Esterase; alpha/beta-hy 99.8 1.6E-19 5.6E-24 184.0 18.0 188 495-743 84-278 (306)
79 3fnb_A Acylaminoacyl peptidase 99.8 3.2E-19 1.1E-23 189.5 19.6 233 479-742 133-403 (405)
80 1l0q_A Surface layer protein; 99.8 6E-17 2E-21 171.7 37.2 270 4-411 11-283 (391)
81 1fj2_A Protein (acyl protein t 99.8 7.9E-19 2.7E-23 171.3 20.9 198 498-742 14-230 (232)
82 2b9v_A Alpha-amino acid ester 99.8 3E-19 1E-23 199.2 20.0 251 479-743 35-369 (652)
83 4b6g_A Putative esterase; hydr 99.8 4.4E-20 1.5E-24 186.3 11.8 236 481-741 22-283 (283)
84 1jkm_A Brefeldin A esterase; s 99.8 3.9E-19 1.3E-23 185.6 19.1 238 478-740 79-358 (361)
85 1ufo_A Hypothetical protein TT 99.8 1.1E-18 3.8E-23 170.8 21.3 208 494-741 13-236 (238)
86 2ojh_A Uncharacterized protein 99.8 5.8E-18 2E-22 171.6 27.3 269 59-447 19-293 (297)
87 4fhz_A Phospholipase/carboxyle 99.8 9.6E-19 3.3E-23 174.1 19.8 188 510-742 64-268 (285)
88 3mve_A FRSA, UPF0255 protein V 99.8 2.1E-19 7.1E-24 190.4 15.7 229 479-741 166-414 (415)
89 3og9_A Protein YAHD A copper i 99.8 2.4E-18 8.1E-23 164.9 21.6 180 511-739 16-208 (209)
90 1k8q_A Triacylglycerol lipase, 99.8 2.9E-18 1E-22 180.7 23.9 239 479-738 25-376 (377)
91 3llc_A Putative hydrolase; str 99.8 1.6E-18 5.4E-23 173.3 20.5 227 480-738 10-268 (270)
92 3azo_A Aminopeptidase; POP fam 99.8 2E-18 7E-23 196.7 23.6 291 6-412 50-378 (662)
93 3cn9_A Carboxylesterase; alpha 99.8 7E-18 2.4E-22 163.9 23.2 185 510-740 22-226 (226)
94 1jji_A Carboxylesterase; alpha 99.8 7.2E-19 2.5E-23 179.7 16.7 226 480-738 55-310 (311)
95 3dkr_A Esterase D; alpha beta 99.8 1.8E-18 6.1E-23 170.8 18.9 203 512-739 22-248 (251)
96 3u0v_A Lysophospholipase-like 99.8 4.9E-18 1.7E-22 166.5 21.8 190 511-743 22-234 (239)
97 1lns_A X-prolyl dipeptidyl ami 99.8 2.4E-18 8.1E-23 194.7 21.8 245 487-743 179-524 (763)
98 3bdi_A Uncharacterized protein 99.8 1.1E-17 3.8E-22 159.9 23.0 198 481-738 4-206 (207)
99 3vgz_A Uncharacterized protein 99.8 1.5E-16 5.1E-21 165.9 33.4 275 32-446 42-334 (353)
100 2gop_A Trilobed protease; beta 99.8 1.3E-17 4.3E-22 173.8 24.9 294 3-413 41-340 (347)
101 3d7r_A Esterase; alpha/beta fo 99.8 3.4E-18 1.2E-22 176.0 19.1 216 494-741 84-323 (326)
102 1vkh_A Putative serine hydrola 99.8 1.3E-18 4.4E-23 174.5 15.5 200 510-736 39-272 (273)
103 2h1i_A Carboxylesterase; struc 99.8 1.1E-17 3.9E-22 162.4 21.6 181 511-740 37-226 (226)
104 4f0j_A Probable hydrolytic enz 99.8 1.3E-17 4.3E-22 170.9 22.2 228 479-738 18-313 (315)
105 3rm3_A MGLP, thermostable mono 99.8 7.6E-18 2.6E-22 168.5 20.1 202 512-740 40-269 (270)
106 3d0k_A Putative poly(3-hydroxy 99.8 3.9E-18 1.3E-22 173.9 16.8 227 481-739 24-287 (304)
107 1sfr_A Antigen 85-A; alpha/bet 99.8 1.9E-17 6.5E-22 168.3 20.9 239 480-743 8-286 (304)
108 3b5e_A MLL8374 protein; NP_108 99.8 2E-17 6.8E-22 160.3 20.1 197 490-741 14-218 (223)
109 2xdw_A Prolyl endopeptidase; a 99.8 1.7E-16 5.7E-21 181.9 31.1 298 5-410 98-423 (710)
110 1tht_A Thioesterase; 2.10A {Vi 99.8 5.4E-17 1.8E-21 164.6 23.2 228 481-738 7-263 (305)
111 2r8b_A AGR_C_4453P, uncharacte 99.8 1.4E-17 4.8E-22 164.6 17.4 180 511-741 61-249 (251)
112 1qlw_A Esterase; anisotropic r 99.8 4.1E-17 1.4E-21 167.8 21.3 115 602-742 199-323 (328)
113 4ezi_A Uncharacterized protein 99.8 1.4E-16 4.8E-21 164.8 24.9 246 478-744 40-374 (377)
114 2bkl_A Prolyl endopeptidase; m 99.7 2.9E-16 9.9E-21 179.4 29.7 294 5-411 94-405 (695)
115 3s25_A Hypothetical 7-bladed b 99.7 3.1E-16 1E-20 157.1 26.0 280 36-467 19-300 (302)
116 2qru_A Uncharacterized protein 99.7 5.3E-17 1.8E-21 162.5 20.6 212 494-738 15-273 (274)
117 2qjw_A Uncharacterized protein 99.7 2.1E-17 7.2E-22 153.4 16.1 173 511-738 3-175 (176)
118 3o4h_A Acylamino-acid-releasin 99.7 1.4E-17 4.6E-22 186.6 17.4 264 6-409 45-320 (582)
119 2ymu_A WD-40 repeat protein; u 99.7 1.3E-15 4.5E-20 170.4 32.9 279 6-443 285-567 (577)
120 1gkl_A Endo-1,4-beta-xylanase 99.7 1.6E-16 5.6E-21 160.3 22.7 204 480-719 40-272 (297)
121 3hfq_A Uncharacterized protein 99.7 2.4E-16 8.2E-21 164.1 24.6 286 6-410 17-326 (347)
122 1r88_A MPT51/MPB51 antigen; AL 99.7 7.1E-17 2.4E-21 161.8 19.6 237 478-741 8-274 (280)
123 3bws_A Protein LP49; two-domai 99.7 3.5E-15 1.2E-19 160.4 34.3 324 6-459 102-431 (433)
124 4f21_A Carboxylesterase/phosph 99.7 3.4E-17 1.2E-21 159.5 16.7 132 582-741 114-245 (246)
125 3i2k_A Cocaine esterase; alpha 99.7 2.1E-17 7.2E-22 182.4 16.6 236 481-743 9-325 (587)
126 3u4y_A Uncharacterized protein 99.7 1.4E-15 4.7E-20 157.1 29.4 274 5-407 20-308 (331)
127 3ia2_A Arylesterase; alpha-bet 99.7 2E-16 6.8E-21 158.3 22.0 212 486-737 3-270 (271)
128 3u4y_A Uncharacterized protein 99.7 5.2E-15 1.8E-19 152.7 32.9 295 35-464 2-308 (331)
129 1l0q_A Surface layer protein; 99.7 4.7E-15 1.6E-19 157.0 32.6 269 59-465 9-280 (391)
130 1tqh_A Carboxylesterase precur 99.7 4.4E-17 1.5E-21 160.5 15.6 201 512-739 16-245 (247)
131 2fx5_A Lipase; alpha-beta hydr 99.7 4.2E-17 1.4E-21 161.8 15.4 187 496-742 34-230 (258)
132 2ocg_A Valacyclovir hydrolase; 99.7 1.7E-16 5.7E-21 157.2 19.7 211 490-736 10-253 (254)
133 4g56_B MGC81050 protein; prote 99.7 2E-15 6.9E-20 157.5 28.8 288 32-460 44-343 (357)
134 1a88_A Chloroperoxidase L; hal 99.7 5.3E-16 1.8E-20 155.6 23.4 214 486-737 3-274 (275)
135 3iii_A COCE/NOND family hydrol 99.7 3.9E-17 1.3E-21 177.3 16.1 247 479-743 39-323 (560)
136 2ymu_A WD-40 repeat protein; u 99.7 8.3E-15 2.8E-19 163.9 35.4 292 6-459 244-538 (577)
137 3om8_A Probable hydrolase; str 99.7 1.9E-16 6.5E-21 157.8 19.4 211 486-737 9-265 (266)
138 1gxr_A ESG1, transducin-like e 99.7 1.4E-14 4.6E-19 149.7 34.1 269 29-444 50-325 (337)
139 3v48_A Aminohydrolase, putativ 99.7 1.6E-16 5.3E-21 158.7 18.6 198 512-741 15-262 (268)
140 1zoi_A Esterase; alpha/beta hy 99.7 3.2E-16 1.1E-20 157.3 20.9 214 486-737 4-275 (276)
141 2yys_A Proline iminopeptidase- 99.7 2.9E-16 1E-20 158.4 20.2 214 483-739 4-276 (286)
142 2qm0_A BES; alpha-beta structu 99.7 2.8E-17 9.6E-22 164.4 12.5 225 479-736 16-272 (275)
143 3vdx_A Designed 16NM tetrahedr 99.7 7.8E-16 2.7E-20 165.5 24.3 220 481-741 3-281 (456)
144 1q0r_A RDMC, aclacinomycin met 99.7 6.4E-16 2.2E-20 157.0 22.2 211 489-741 8-295 (298)
145 1imj_A CIB, CCG1-interacting f 99.7 2E-17 6.8E-22 158.5 9.8 191 489-738 14-208 (210)
146 1mtz_A Proline iminopeptidase; 99.7 2.5E-16 8.5E-21 159.6 18.1 213 489-739 12-292 (293)
147 1a8s_A Chloroperoxidase F; hal 99.7 1.1E-15 3.6E-20 153.2 22.5 212 486-737 3-272 (273)
148 1brt_A Bromoperoxidase A2; hal 99.7 6.7E-16 2.3E-20 155.0 21.0 194 513-737 24-276 (277)
149 3fob_A Bromoperoxidase; struct 99.7 5.3E-16 1.8E-20 156.1 20.3 194 513-737 28-280 (281)
150 3u1t_A DMMA haloalkane dehalog 99.7 3E-16 1E-20 160.0 18.8 214 490-744 17-301 (309)
151 1yr2_A Prolyl oligopeptidase; 99.7 1.5E-15 5E-20 174.8 26.5 295 5-409 133-447 (741)
152 3d59_A Platelet-activating fac 99.7 2.4E-16 8.3E-21 165.9 18.3 186 510-743 96-353 (383)
153 3scy_A Hypothetical bacterial 99.7 3.7E-15 1.2E-19 156.0 27.1 284 6-409 28-345 (361)
154 3iuj_A Prolyl endopeptidase; h 99.7 2.3E-15 8E-20 171.3 27.4 275 32-412 130-414 (693)
155 1ri6_A Putative isomerase YBHE 99.7 6.9E-15 2.3E-19 152.5 28.7 281 5-410 15-317 (343)
156 3hss_A Putative bromoperoxidas 99.7 1.8E-16 6.1E-21 160.6 16.2 197 512-738 43-290 (293)
157 3e0x_A Lipase-esterase related 99.7 1.8E-16 6.1E-21 155.7 15.6 195 512-736 16-245 (245)
158 4fle_A Esterase; structural ge 99.7 5.9E-17 2E-21 154.2 11.6 183 512-737 2-190 (202)
159 1a8q_A Bromoperoxidase A1; hal 99.7 2.4E-15 8.1E-20 150.7 24.0 213 486-737 3-273 (274)
160 3r0v_A Alpha/beta hydrolase fo 99.7 1.3E-15 4.5E-20 151.2 21.9 205 486-737 7-261 (262)
161 3dqz_A Alpha-hydroxynitrIle ly 99.7 3.7E-16 1.3E-20 154.9 17.5 198 513-740 5-258 (258)
162 2pl5_A Homoserine O-acetyltran 99.7 5.7E-16 2E-20 162.5 19.8 177 550-738 85-364 (366)
163 2y6u_A Peroxisomal membrane pr 99.7 3.9E-17 1.3E-21 173.6 10.9 232 486-742 25-347 (398)
164 3g8y_A SUSD/RAGB-associated es 99.7 1.7E-16 5.6E-21 167.2 15.4 153 477-637 83-260 (391)
165 3hfq_A Uncharacterized protein 99.7 7.8E-15 2.7E-19 152.6 27.7 299 59-468 15-327 (347)
166 2r11_A Carboxylesterase NP; 26 99.7 6E-16 2.1E-20 157.9 18.7 216 482-737 46-305 (306)
167 3s25_A Hypothetical 7-bladed b 99.7 3.9E-15 1.4E-19 149.0 24.1 240 5-371 37-281 (302)
168 3qit_A CURM TE, polyketide syn 99.7 6.8E-16 2.3E-20 155.2 18.4 203 489-731 11-282 (286)
169 1pby_B Quinohemoprotein amine 99.7 1.4E-14 4.9E-19 149.6 28.8 290 4-411 10-318 (337)
170 3qvm_A OLEI00960; structural g 99.7 2.9E-16 9.9E-21 157.7 15.4 197 512-740 28-279 (282)
171 3oos_A Alpha/beta hydrolase fa 99.7 1.7E-16 5.8E-21 159.1 13.6 193 512-736 23-278 (278)
172 4gqb_B Methylosome protein 50; 99.7 2E-14 7E-19 148.6 29.6 287 32-460 32-331 (344)
173 3sty_A Methylketone synthase 1 99.7 3.6E-16 1.2E-20 155.8 15.7 199 511-739 11-266 (267)
174 3ow8_A WD repeat-containing pr 99.7 7.5E-15 2.6E-19 150.6 25.9 248 4-370 57-309 (321)
175 4dnp_A DAD2; alpha/beta hydrol 99.7 3.8E-16 1.3E-20 155.7 15.5 196 512-738 20-268 (269)
176 3nuz_A Putative acetyl xylan e 99.7 2.5E-16 8.6E-21 166.1 14.8 222 476-713 87-346 (398)
177 3fsg_A Alpha/beta superfamily 99.7 2.6E-16 8.9E-21 157.2 14.2 200 512-741 21-270 (272)
178 2xua_A PCAD, 3-oxoadipate ENOL 99.7 2.4E-15 8.3E-20 149.8 21.0 211 489-738 9-264 (266)
179 3zwl_B Eukaryotic translation 99.7 4.4E-14 1.5E-18 147.9 31.6 309 31-461 33-347 (369)
180 2qs9_A Retinoblastoma-binding 99.7 7.7E-16 2.6E-20 145.4 15.9 185 512-743 4-189 (194)
181 3guu_A Lipase A; protein struc 99.7 6.5E-15 2.2E-19 154.1 23.6 251 479-750 73-416 (462)
182 3i28_A Epoxide hydrolase 2; ar 99.7 2E-15 6.9E-20 168.0 21.1 224 480-744 236-550 (555)
183 1nr0_A Actin interacting prote 99.7 9.9E-14 3.4E-18 155.9 34.9 311 6-465 40-360 (611)
184 1dqz_A 85C, protein (antigen 8 99.7 1.9E-15 6.6E-20 151.7 18.8 235 480-741 5-279 (280)
185 3c8d_A Enterochelin esterase; 99.7 4.1E-16 1.4E-20 163.9 14.4 226 479-741 166-399 (403)
186 1c4x_A BPHD, protein (2-hydrox 99.7 2E-15 6.8E-20 152.3 18.9 214 488-738 13-284 (285)
187 4g9e_A AHL-lactonase, alpha/be 99.7 3.6E-16 1.2E-20 156.9 13.3 203 512-746 24-276 (279)
188 1hkh_A Gamma lactamase; hydrol 99.7 1.5E-15 5.1E-20 152.7 17.8 194 513-737 24-278 (279)
189 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 3.2E-15 1.1E-19 150.7 20.0 197 513-738 34-285 (286)
190 3nwo_A PIP, proline iminopepti 99.7 1.8E-15 6.3E-20 155.9 18.5 216 489-740 35-323 (330)
191 1nir_A Nitrite reductase; hemo 99.7 8.2E-14 2.8E-18 153.1 32.4 327 6-466 160-520 (543)
192 1gxr_A ESG1, transducin-like e 99.7 5.9E-14 2E-18 144.9 29.6 246 5-370 72-325 (337)
193 1r5m_A SIR4-interacting protei 99.7 7.6E-14 2.6E-18 149.2 31.3 254 31-405 46-363 (425)
194 3kxp_A Alpha-(N-acetylaminomet 99.7 2.5E-15 8.5E-20 153.9 18.8 207 489-737 55-313 (314)
195 3i1i_A Homoserine O-acetyltran 99.7 1.7E-15 5.8E-20 159.5 18.0 72 667-741 302-374 (377)
196 3ow8_A WD repeat-containing pr 99.7 5.3E-14 1.8E-18 144.2 28.4 278 32-458 34-319 (321)
197 1uxo_A YDEN protein; hydrolase 99.7 8.8E-16 3E-20 144.7 13.8 182 512-741 4-188 (192)
198 2b61_A Homoserine O-acetyltran 99.6 2.3E-15 8E-20 158.5 18.4 177 550-738 94-376 (377)
199 3vgz_A Uncharacterized protein 99.6 5.8E-14 2E-18 146.1 28.8 255 6-371 70-333 (353)
200 1iup_A META-cleavage product h 99.6 8.8E-16 3E-20 154.5 14.3 173 551-739 51-273 (282)
201 4ery_A WD repeat-containing pr 99.6 2.7E-13 9.1E-18 138.6 31.5 268 31-444 24-298 (312)
202 2wfl_A Polyneuridine-aldehyde 99.6 9.4E-15 3.2E-19 145.4 19.9 196 512-737 10-263 (264)
203 3bws_A Protein LP49; two-domai 99.6 1.2E-13 4E-18 148.4 29.9 297 36-465 69-395 (433)
204 2e3j_A Epoxide hydrolase EPHB; 99.6 6.9E-15 2.4E-19 153.4 19.6 118 489-636 10-131 (356)
205 3ei3_B DNA damage-binding prot 99.6 7.7E-13 2.6E-17 139.5 35.6 299 31-460 74-382 (383)
206 1wom_A RSBQ, sigma factor SIGB 99.6 1.9E-15 6.5E-20 151.1 14.3 196 512-739 20-270 (271)
207 2pm9_A Protein WEB1, protein t 99.6 6.2E-14 2.1E-18 149.6 27.0 307 32-463 14-340 (416)
208 3bdv_A Uncharacterized protein 99.6 6.4E-15 2.2E-19 138.6 17.0 129 578-740 58-188 (191)
209 1wm1_A Proline iminopeptidase; 99.6 1.3E-14 4.4E-19 148.8 20.6 215 484-737 17-316 (317)
210 3g9x_A Haloalkane dehalogenase 99.6 4.7E-15 1.6E-19 150.4 17.1 210 490-739 18-293 (299)
211 2wue_A 2-hydroxy-6-OXO-6-pheny 99.6 1.7E-14 5.8E-19 145.8 21.1 213 488-737 19-288 (291)
212 2cjp_A Epoxide hydrolase; HET: 99.6 9E-15 3.1E-19 150.7 19.2 214 489-737 18-326 (328)
213 1b6g_A Haloalkane dehalogenase 99.6 7.7E-15 2.6E-19 149.7 18.4 209 492-738 34-308 (310)
214 3bf7_A Esterase YBFF; thioeste 99.6 4.8E-15 1.7E-19 146.7 16.5 196 512-739 16-255 (255)
215 1u2e_A 2-hydroxy-6-ketonona-2, 99.6 1.7E-14 5.7E-19 145.8 20.6 196 513-737 37-287 (289)
216 4aez_A CDC20, WD repeat-contai 99.6 1.7E-13 5.8E-18 145.5 29.4 265 4-406 112-383 (401)
217 1xkl_A SABP2, salicylic acid-b 99.6 1.7E-14 5.9E-19 144.1 20.4 200 512-741 4-261 (273)
218 2xmz_A Hydrolase, alpha/beta h 99.6 2.6E-15 8.9E-20 150.0 14.4 194 513-739 17-266 (269)
219 2gzs_A IROE protein; enterobac 99.6 3E-15 1E-19 149.4 14.6 220 480-738 12-264 (278)
220 1nr0_A Actin interacting prote 99.6 2.9E-13 9.8E-18 152.1 32.5 246 32-410 20-277 (611)
221 2pm9_A Protein WEB1, protein t 99.6 9.1E-14 3.1E-18 148.3 27.1 259 4-370 44-325 (416)
222 3vl1_A 26S proteasome regulato 99.6 1.9E-13 6.6E-18 146.1 29.6 320 4-459 77-418 (420)
223 3fm0_A Protein CIAO1; WDR39,SG 99.6 1.3E-13 4.6E-18 142.9 27.5 293 32-462 18-337 (345)
224 4h5i_A Guanine nucleotide-exch 99.6 1.3E-13 4.3E-18 144.2 27.3 205 175-460 134-343 (365)
225 1erj_A Transcriptional repress 99.6 3.3E-13 1.1E-17 142.7 30.5 248 32-411 66-349 (393)
226 2xe4_A Oligopeptidase B; hydro 99.6 8.6E-14 3E-18 159.3 27.9 263 32-411 175-466 (751)
227 2rau_A Putative esterase; NP_3 99.6 5.5E-15 1.9E-19 154.2 16.3 180 545-739 84-353 (354)
228 1azw_A Proline iminopeptidase; 99.6 2.4E-14 8.1E-19 146.5 20.7 119 484-635 14-136 (313)
229 1pby_B Quinohemoprotein amine 99.6 8.4E-14 2.9E-18 143.8 25.0 275 59-465 8-315 (337)
230 2xt0_A Haloalkane dehalogenase 99.6 2.2E-14 7.4E-19 145.4 20.0 208 492-737 33-296 (297)
231 1j1i_A META cleavage compound 99.6 6.7E-15 2.3E-19 149.2 16.0 216 489-742 23-285 (296)
232 1ri6_A Putative isomerase YBHE 99.6 2.9E-13 1E-17 140.1 28.8 289 61-469 14-319 (343)
233 3bwx_A Alpha/beta hydrolase; Y 99.6 3.9E-14 1.3E-18 142.7 21.3 217 481-738 5-284 (285)
234 3h2g_A Esterase; xanthomonas o 99.6 1.9E-14 6.4E-19 152.3 19.7 150 479-637 44-210 (397)
235 3r40_A Fluoroacetate dehalogen 99.6 1.3E-14 4.4E-19 147.6 17.8 210 488-739 19-303 (306)
236 2ynn_A Coatomer subunit beta'; 99.6 4.9E-13 1.7E-17 135.9 29.4 245 32-411 15-267 (304)
237 3fla_A RIFR; alpha-beta hydrol 99.6 1E-14 3.4E-19 145.4 16.4 204 511-747 19-257 (267)
238 3scy_A Hypothetical bacterial 99.6 4.4E-13 1.5E-17 140.1 29.8 310 43-467 13-346 (361)
239 3zwl_B Eukaryotic translation 99.6 2.2E-13 7.6E-18 142.5 27.3 267 4-405 53-348 (369)
240 3p2m_A Possible hydrolase; alp 99.6 5.8E-15 2E-19 152.3 14.9 205 491-738 69-329 (330)
241 1got_B GT-beta; complex (GTP-b 99.6 5.8E-13 2E-17 137.8 29.2 264 32-443 57-330 (340)
242 4g56_B MGC81050 protein; prote 99.6 6.7E-14 2.3E-18 145.9 21.9 254 5-371 70-332 (357)
243 3mkq_A Coatomer beta'-subunit; 99.6 3.2E-13 1.1E-17 157.7 29.4 241 32-410 15-266 (814)
244 2qvb_A Haloalkane dehalogenase 99.6 1.2E-14 4.2E-19 147.1 14.9 209 489-741 15-294 (297)
245 2q0x_A Protein DUF1749, unchar 99.6 2.1E-14 7.2E-19 147.7 16.7 212 492-740 24-295 (335)
246 2vat_A Acetyl-COA--deacetylcep 99.6 7.7E-15 2.6E-19 158.0 13.8 68 666-740 375-443 (444)
247 3c6x_A Hydroxynitrilase; atomi 99.6 2.9E-14 1E-18 141.1 16.9 196 513-738 4-255 (257)
248 4e54_B DNA damage-binding prot 99.6 6.4E-13 2.2E-17 142.7 28.8 305 32-464 121-434 (435)
249 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.6E-13 8.9E-18 142.0 24.9 276 6-370 15-328 (365)
250 1vyh_C Platelet-activating fac 99.6 5.8E-13 2E-17 141.7 27.8 264 32-443 110-398 (410)
251 1m33_A BIOH protein; alpha-bet 99.6 1.4E-14 4.8E-19 143.6 14.1 189 514-738 15-255 (258)
252 4gqb_B Methylosome protein 50; 99.6 2.4E-13 8.1E-18 140.6 23.6 230 32-370 84-318 (344)
253 2xzm_R RACK1; ribosome, transl 99.6 1.6E-12 5.4E-17 134.8 29.9 290 32-461 23-341 (343)
254 3afi_E Haloalkane dehalogenase 99.6 4.7E-14 1.6E-18 144.3 18.1 212 490-741 15-303 (316)
255 4fol_A FGH, S-formylglutathion 99.6 4.9E-14 1.7E-18 140.6 17.5 243 482-741 15-297 (299)
256 1isp_A Lipase; alpha/beta hydr 99.6 6.1E-14 2.1E-18 130.5 17.1 169 512-739 3-176 (181)
257 3kda_A CFTR inhibitory factor 99.6 9.9E-14 3.4E-18 140.8 20.0 209 489-741 17-296 (301)
258 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 2.6E-14 8.8E-19 145.2 15.5 210 489-742 16-296 (302)
259 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 2.6E-14 8.8E-19 142.1 15.1 209 490-737 7-263 (264)
260 3dw8_B Serine/threonine-protei 99.6 1.7E-12 5.9E-17 139.8 30.6 176 175-410 178-380 (447)
261 1ycd_A Hypothetical 27.3 kDa p 99.6 4.1E-15 1.4E-19 146.0 8.9 208 512-742 5-240 (243)
262 3i2n_A WD repeat-containing pr 99.6 5.4E-13 1.9E-17 138.9 25.5 299 32-461 20-354 (357)
263 3vl1_A 26S proteasome regulato 99.6 4.3E-13 1.5E-17 143.3 24.4 235 33-405 59-324 (420)
264 1ehy_A Protein (soluble epoxid 99.6 3.5E-13 1.2E-17 136.3 22.3 206 489-736 16-293 (294)
265 1pja_A Palmitoyl-protein thioe 99.6 6.4E-14 2.2E-18 142.4 16.9 196 512-736 36-301 (302)
266 2qmq_A Protein NDRG2, protein 99.5 5.8E-14 2E-18 141.5 16.4 213 490-737 19-285 (286)
267 3mkq_A Coatomer beta'-subunit; 99.5 1.5E-12 5.1E-17 152.1 30.6 243 5-366 35-285 (814)
268 2xzm_R RACK1; ribosome, transl 99.5 2.1E-12 7.1E-17 133.8 28.4 256 4-370 48-328 (343)
269 3iz6_a 40S ribosomal protein R 99.5 2.7E-12 9.3E-17 135.0 29.7 296 32-461 68-376 (380)
270 2j04_A TAU60, YPL007P, hypothe 99.5 5.3E-14 1.8E-18 149.4 16.0 243 30-444 85-349 (588)
271 3frx_A Guanine nucleotide-bind 99.5 6.7E-13 2.3E-17 136.0 23.9 252 4-370 39-305 (319)
272 3frx_A Guanine nucleotide-bind 99.5 2.7E-12 9.1E-17 131.5 28.2 282 32-460 19-317 (319)
273 2pbi_B Guanine nucleotide-bind 99.5 2.8E-12 9.4E-17 133.5 28.7 266 32-443 66-344 (354)
274 1got_B GT-beta; complex (GTP-b 99.5 2.5E-12 8.5E-17 133.1 27.7 248 4-371 76-332 (340)
275 2vdu_B TRNA (guanine-N(7)-)-me 99.5 9.4E-12 3.2E-16 134.2 32.7 216 175-467 150-399 (450)
276 1vyh_C Platelet-activating fac 99.5 2.4E-12 8.2E-17 136.9 27.2 246 5-371 130-400 (410)
277 1jmx_B Amine dehydrogenase; ox 99.5 2.3E-12 8E-17 133.6 26.3 290 34-464 3-329 (349)
278 4e54_B DNA damage-binding prot 99.5 1.5E-12 5.2E-17 139.7 25.5 274 4-407 141-434 (435)
279 3ei3_B DNA damage-binding prot 99.5 2.6E-12 8.9E-17 135.4 26.7 250 4-370 95-371 (383)
280 1yfq_A Cell cycle arrest prote 99.5 6.5E-12 2.2E-16 129.9 29.3 244 32-410 13-289 (342)
281 4aez_A CDC20, WD repeat-contai 99.5 1.2E-11 4.1E-16 131.2 31.9 267 61-464 112-384 (401)
282 2psd_A Renilla-luciferin 2-mon 99.5 1.7E-13 5.7E-18 140.3 16.2 211 489-742 28-308 (318)
283 3gff_A IROE-like serine hydrol 99.5 4E-14 1.4E-18 143.7 11.3 221 480-741 11-267 (331)
284 1k8k_C P40, ARP2/3 complex 41 99.5 2.1E-12 7E-17 135.4 24.8 224 32-369 10-262 (372)
285 3pic_A CIP2; alpha/beta hydrol 99.5 2.3E-12 7.8E-17 128.1 22.9 216 493-747 91-352 (375)
286 1jmx_B Amine dehydrogenase; ox 99.5 1.7E-12 5.8E-17 134.7 23.5 289 4-410 20-332 (349)
287 1r3d_A Conserved hypothetical 99.5 1.9E-13 6.3E-18 136.0 15.3 194 512-740 16-263 (264)
288 4gga_A P55CDC, cell division c 99.5 7E-12 2.4E-16 133.9 28.4 267 5-405 125-397 (420)
289 2j04_A TAU60, YPL007P, hypothe 99.5 9.8E-13 3.4E-17 139.8 20.9 184 175-444 86-286 (588)
290 1sq9_A Antiviral protein SKI8; 99.5 1.3E-11 4.3E-16 130.7 29.9 253 32-411 18-330 (397)
291 1nir_A Nitrite reductase; hemo 99.5 2.2E-12 7.6E-17 141.6 24.7 290 5-412 200-523 (543)
292 3sfz_A APAF-1, apoptotic pepti 99.5 3.1E-12 1.1E-16 156.7 28.5 340 5-464 819-1162(1249)
293 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.3E-12 1.5E-16 131.5 25.2 272 4-405 37-337 (345)
294 1pgu_A Actin interacting prote 99.5 1.8E-11 6.3E-16 137.7 32.5 284 32-463 20-331 (615)
295 2pbi_B Guanine nucleotide-bind 99.5 1.1E-11 3.8E-16 128.9 27.9 246 4-371 85-346 (354)
296 1erj_A Transcriptional repress 99.5 6.9E-12 2.4E-16 132.6 26.8 238 33-370 126-377 (393)
297 4h5i_A Guanine nucleotide-exch 99.5 1.1E-12 3.6E-17 137.2 19.9 200 33-330 136-343 (365)
298 3l80_A Putative uncharacterize 99.5 6.9E-14 2.4E-18 141.4 10.1 168 552-739 67-289 (292)
299 4g4g_A 4-O-methyl-glucuronoyl 99.5 3.3E-12 1.1E-16 128.2 21.8 216 493-748 124-387 (433)
300 3qmv_A Thioesterase, REDJ; alp 99.5 3.9E-14 1.3E-18 142.3 7.9 193 512-735 51-279 (280)
301 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 7.9E-13 2.7E-17 132.2 17.3 198 512-739 27-272 (276)
302 3dwl_C Actin-related protein 2 99.5 4.7E-13 1.6E-17 140.8 16.4 230 32-370 13-270 (377)
303 2aq5_A Coronin-1A; WD40 repeat 99.5 6.4E-12 2.2E-16 133.4 25.1 292 34-466 38-348 (402)
304 4aow_A Guanine nucleotide-bind 99.5 4E-11 1.4E-15 123.7 30.5 311 6-462 17-339 (340)
305 2aq5_A Coronin-1A; WD40 repeat 99.5 6E-12 2.1E-16 133.6 24.6 253 4-368 56-330 (402)
306 3sfz_A APAF-1, apoptotic pepti 99.5 1.1E-11 3.8E-16 151.8 30.0 280 31-459 616-912 (1249)
307 1sq9_A Antiviral protein SKI8; 99.5 5.2E-12 1.8E-16 133.7 23.6 229 4-333 35-323 (397)
308 4a11_B DNA excision repair pro 99.5 3.9E-11 1.3E-15 127.3 30.1 311 7-463 25-368 (408)
309 3dm0_A Maltose-binding peripla 99.5 2.8E-11 9.7E-16 138.2 30.6 290 32-459 384-692 (694)
310 3b12_A Fluoroacetate dehalogen 99.2 6.1E-15 2.1E-19 149.9 0.0 198 512-741 25-294 (304)
311 1r5m_A SIR4-interacting protei 99.4 5.9E-12 2E-16 134.4 23.2 217 5-332 130-361 (425)
312 4ery_A WD repeat-containing pr 99.4 6E-11 2.1E-15 120.9 28.5 245 5-370 45-298 (312)
313 3i2n_A WD repeat-containing pr 99.4 1.1E-11 3.7E-16 129.0 23.3 215 4-329 43-290 (357)
314 3odt_A Protein DOA1; ubiquitin 99.4 1.3E-10 4.5E-15 118.2 29.1 272 32-464 20-300 (313)
315 2d81_A PHB depolymerase; alpha 99.4 7.3E-13 2.5E-17 132.7 11.8 144 596-741 6-177 (318)
316 1k8k_C P40, ARP2/3 complex 41 99.4 1.8E-11 6.2E-16 128.1 23.1 229 4-330 29-274 (372)
317 4ggc_A P55CDC, cell division c 99.4 9.7E-11 3.3E-15 119.5 28.0 254 5-371 45-304 (318)
318 3dm0_A Maltose-binding peripla 99.4 4.8E-11 1.7E-15 136.3 27.0 220 4-333 404-633 (694)
319 3qyj_A ALR0039 protein; alpha/ 99.4 2.1E-11 7.1E-16 122.9 21.0 208 489-738 12-290 (291)
320 3c5v_A PME-1, protein phosphat 99.4 1.8E-11 6.1E-16 125.1 20.5 197 512-740 38-301 (316)
321 2ynn_A Coatomer subunit beta'; 99.4 6.3E-11 2.2E-15 120.2 24.4 242 4-365 34-284 (304)
322 2vdu_B TRNA (guanine-N(7)-)-me 99.4 4.8E-11 1.6E-15 128.7 24.5 184 32-316 104-326 (450)
323 3k26_A Polycomb protein EED; W 99.4 5.9E-11 2E-15 123.8 24.6 286 32-459 20-365 (366)
324 4i19_A Epoxide hydrolase; stru 99.4 2E-11 6.8E-16 127.7 20.5 213 489-739 75-385 (388)
325 2pm7_B Protein transport prote 99.4 1.3E-10 4.3E-15 117.6 25.8 231 32-370 11-273 (297)
326 4gga_A P55CDC, cell division c 99.4 3.1E-10 1.1E-14 121.0 29.9 280 34-461 109-396 (420)
327 4aow_A Guanine nucleotide-bind 99.4 1.6E-10 5.5E-15 119.2 26.7 263 4-405 60-339 (340)
328 3fle_A SE_1780 protein; struct 99.4 2.2E-11 7.5E-16 118.0 18.4 153 578-736 76-247 (249)
329 3jrp_A Fusion protein of prote 99.4 1.2E-10 4E-15 122.2 25.5 227 32-370 13-275 (379)
330 3lcr_A Tautomycetin biosynthet 99.4 1.1E-11 3.7E-16 126.4 16.9 203 512-742 81-305 (319)
331 2oiz_A Aromatic amine dehydrog 99.4 4.4E-10 1.5E-14 116.8 29.5 303 6-439 32-361 (361)
332 2mad_H Methylamine dehydrogena 99.4 1.8E-09 6E-14 112.3 33.9 307 36-466 26-356 (373)
333 1qks_A Cytochrome CD1 nitrite 99.4 1E-09 3.5E-14 120.1 33.4 325 5-465 177-543 (567)
334 3mmy_A MRNA export factor; mRN 99.4 1.7E-10 5.9E-15 120.3 26.0 267 31-445 40-335 (368)
335 1pgu_A Actin interacting prote 99.4 2.7E-10 9.1E-15 128.1 29.4 224 5-333 39-284 (615)
336 3iz6_a 40S ribosomal protein R 99.3 1.2E-10 4.1E-15 122.4 24.7 258 4-404 87-376 (380)
337 1qe3_A PNB esterase, para-nitr 99.3 5.5E-13 1.9E-17 143.3 6.2 211 493-721 82-316 (489)
338 3ds8_A LIN2722 protein; unkonw 99.3 2.3E-11 7.8E-16 119.6 16.7 156 577-741 72-244 (254)
339 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.2E-10 7.5E-15 119.6 24.5 175 244-461 147-342 (365)
340 2mad_H Methylamine dehydrogena 99.3 1.5E-09 5E-14 113.0 30.5 281 6-409 48-356 (373)
341 1kez_A Erythronolide synthase; 99.3 1.3E-11 4.6E-16 124.9 14.7 200 511-741 66-283 (300)
342 3dwl_C Actin-related protein 2 99.3 3.8E-11 1.3E-15 126.0 18.6 216 4-316 32-270 (377)
343 3k26_A Polycomb protein EED; W 99.3 6.6E-11 2.3E-15 123.4 20.1 260 6-370 45-354 (366)
344 3dw8_B Serine/threonine-protei 99.3 2.5E-10 8.6E-15 122.8 24.7 126 175-333 227-374 (447)
345 3jrp_A Fusion protein of prote 99.3 4E-10 1.4E-14 118.1 25.2 243 88-459 13-286 (379)
346 2xyi_A Probable histone-bindin 99.3 2.8E-10 9.6E-15 121.8 24.1 206 29-330 127-353 (430)
347 1yfq_A Cell cycle arrest prote 99.3 5.3E-10 1.8E-14 115.4 25.3 245 4-372 32-313 (342)
348 4ggc_A P55CDC, cell division c 99.3 2.5E-09 8.7E-14 108.9 29.5 281 34-461 29-316 (318)
349 3f3f_A Nucleoporin SEH1; struc 99.3 5.1E-10 1.7E-14 115.5 24.6 206 32-329 13-248 (351)
350 2hes_X YDR267CP; beta-propelle 99.3 2.9E-10 1E-14 116.8 22.4 254 4-370 33-316 (330)
351 2hes_X YDR267CP; beta-propelle 99.3 1.2E-09 4.2E-14 112.2 26.7 196 32-329 16-229 (330)
352 3bg1_A Protein SEC13 homolog; 99.3 2.6E-10 8.8E-15 116.4 21.1 230 32-371 15-282 (316)
353 3ils_A PKS, aflatoxin biosynth 99.3 7.9E-11 2.7E-15 116.7 16.6 198 512-736 21-264 (265)
354 2pm7_B Protein transport prote 99.3 2.2E-09 7.6E-14 108.3 27.0 251 88-465 11-291 (297)
355 4a11_B DNA excision repair pro 99.3 1.5E-09 5.1E-14 114.9 26.9 274 5-406 66-368 (408)
356 3sjl_D Methylamine dehydrogena 99.3 9.2E-09 3.1E-13 105.3 31.1 311 36-465 38-368 (386)
357 3lp5_A Putative cell surface h 99.2 6.4E-11 2.2E-15 114.6 13.5 146 578-738 77-233 (250)
358 2j04_B YDR362CP, TAU91; beta p 99.2 4.3E-10 1.5E-14 122.4 21.6 219 3-332 181-428 (524)
359 2oaj_A Protein SNI1; WD40 repe 99.2 6.1E-09 2.1E-13 121.6 32.7 89 5-107 120-232 (902)
360 2dg1_A DRP35, lactonase; beta 99.2 4.1E-09 1.4E-13 108.3 27.0 244 157-459 66-315 (333)
361 1qks_A Cytochrome CD1 nitrite 99.2 9E-09 3.1E-13 112.6 30.9 300 34-461 157-478 (567)
362 3g02_A Epoxide hydrolase; alph 99.2 3.4E-10 1.2E-14 118.7 18.7 215 490-743 93-400 (408)
363 3odt_A Protein DOA1; ubiquitin 99.2 2.2E-09 7.5E-14 109.0 24.5 258 4-407 38-300 (313)
364 3v7d_B Cell division control p 99.2 1.3E-08 4.6E-13 109.9 30.9 283 37-465 127-426 (464)
365 3e5z_A Putative gluconolactona 99.2 2.4E-09 8.3E-14 108.0 23.0 256 19-407 18-290 (296)
366 3c75_H MADH, methylamine dehyd 99.2 8.9E-09 3E-13 107.5 27.5 309 39-464 81-406 (426)
367 3e5z_A Putative gluconolactona 99.2 1.7E-08 5.9E-13 101.7 29.0 229 157-464 50-290 (296)
368 3v7d_B Cell division control p 99.2 1.3E-08 4.5E-13 109.9 29.3 257 4-408 141-426 (464)
369 2oiz_A Aromatic amine dehydrog 99.2 1.1E-08 3.9E-13 106.1 26.6 314 40-468 13-342 (361)
370 1tca_A Lipase; hydrolase(carbo 99.1 7.4E-11 2.5E-15 119.3 9.7 212 492-738 14-243 (317)
371 3g4e_A Regucalcin; six bladed 99.1 1.2E-08 4.2E-13 102.8 26.0 223 157-447 35-263 (297)
372 3jro_A Fusion protein of prote 99.1 1.8E-09 6.3E-14 124.0 22.2 230 32-370 11-273 (753)
373 3sjl_D Methylamine dehydrogena 99.1 1.3E-08 4.4E-13 104.2 25.8 280 5-412 59-372 (386)
374 3vu4_A KMHSV2; beta-propeller 99.1 1.1E-08 3.7E-13 106.2 25.9 230 31-405 20-273 (355)
375 3dr2_A Exported gluconolactona 99.1 5.4E-09 1.8E-13 105.9 22.9 245 19-370 35-295 (305)
376 3c75_H MADH, methylamine dehyd 99.1 4.8E-09 1.6E-13 109.5 22.9 276 5-409 99-408 (426)
377 3gre_A Serine/threonine-protei 99.1 5.9E-09 2E-13 111.7 24.1 197 31-333 64-293 (437)
378 3dr2_A Exported gluconolactona 99.1 2.2E-08 7.6E-13 101.4 26.9 261 70-458 33-304 (305)
379 3g4e_A Regucalcin; six bladed 99.1 1.1E-08 3.9E-13 103.1 24.2 232 34-371 16-261 (297)
380 3mmy_A MRNA export factor; mRN 99.1 1.2E-08 4.2E-13 106.0 24.5 251 4-371 63-335 (368)
381 2k2q_B Surfactin synthetase th 99.1 4.1E-10 1.4E-14 110.0 12.2 193 512-739 13-237 (242)
382 2xyi_A Probable histone-bindin 99.1 4E-08 1.4E-12 104.9 28.9 212 175-460 182-410 (430)
383 1npe_A Nidogen, entactin; glyc 99.1 3.9E-08 1.3E-12 97.4 25.5 239 42-410 1-245 (267)
384 3bg1_A Protein SEC13 homolog; 99.1 1.7E-08 5.7E-13 102.9 23.4 250 88-470 15-304 (316)
385 2oaj_A Protein SNI1; WD40 repe 99.1 1.2E-08 4.2E-13 119.0 25.2 203 32-333 19-243 (902)
386 3vu4_A KMHSV2; beta-propeller 99.1 2.5E-08 8.6E-13 103.4 24.8 208 6-316 41-259 (355)
387 3f3f_A Nucleoporin SEH1; struc 99.1 3.4E-08 1.2E-12 101.6 25.7 191 88-370 13-237 (351)
388 3jro_A Fusion protein of prote 99.1 6.6E-09 2.2E-13 119.4 22.2 247 88-460 11-285 (753)
389 3gre_A Serine/threonine-protei 99.1 1.9E-08 6.3E-13 107.8 24.1 299 33-465 30-364 (437)
390 2ghs_A AGR_C_1268P; regucalcin 99.0 7E-08 2.4E-12 98.6 25.9 225 34-371 52-291 (326)
391 1ukc_A ESTA, esterase; fungi, 99.0 2.7E-10 9.2E-15 123.4 7.5 211 494-720 86-327 (522)
392 3lrv_A PRE-mRNA-splicing facto 99.0 8.9E-08 3.1E-12 98.7 26.0 240 5-371 58-322 (343)
393 2j04_B YDR362CP, TAU91; beta p 99.0 9.7E-09 3.3E-13 111.7 19.1 144 175-371 267-417 (524)
394 2ghs_A AGR_C_1268P; regucalcin 99.0 4E-08 1.4E-12 100.4 22.7 213 5-318 71-292 (326)
395 1gpl_A RP2 lipase; serine este 99.0 6.4E-10 2.2E-14 117.5 9.1 184 512-740 70-258 (432)
396 4gq1_A NUP37; propeller, trans 99.0 2.1E-08 7.2E-13 105.6 20.6 112 36-220 95-220 (393)
397 3lrv_A PRE-mRNA-splicing facto 99.0 6.8E-08 2.3E-12 99.6 23.5 182 31-316 126-321 (343)
398 2dg1_A DRP35, lactonase; beta 99.0 8.7E-08 3E-12 98.3 24.2 238 5-332 66-316 (333)
399 2h7c_A Liver carboxylesterase 99.0 8.9E-10 3E-14 120.0 9.4 128 494-637 99-233 (542)
400 2ovr_B FBW7, F-BOX/WD repeat p 99.0 5.2E-07 1.8E-11 96.7 31.1 299 4-460 138-442 (445)
401 1ei9_A Palmitoyl protein thioe 99.0 4.1E-09 1.4E-13 104.5 12.6 86 546-636 27-116 (279)
402 2ece_A 462AA long hypothetical 98.9 3.9E-06 1.3E-10 86.4 34.7 265 177-487 140-450 (462)
403 2ogt_A Thermostable carboxyles 98.9 1.9E-09 6.5E-14 116.1 9.9 128 494-637 85-224 (498)
404 2ha2_A ACHE, acetylcholinester 98.9 1.2E-09 4.1E-14 119.0 7.0 128 494-636 97-232 (543)
405 2hfk_A Pikromycin, type I poly 98.9 9.2E-09 3.2E-13 104.8 13.1 175 551-741 114-313 (319)
406 3dsm_A Uncharacterized protein 98.9 6.4E-07 2.2E-11 91.5 26.6 275 4-409 16-307 (328)
407 3dsm_A Uncharacterized protein 98.9 4.8E-07 1.6E-11 92.5 25.0 228 157-463 64-304 (328)
408 1p0i_A Cholinesterase; serine 98.9 2.4E-09 8.1E-14 116.4 7.8 128 494-637 93-228 (529)
409 1mda_H Methylamine dehydrogena 98.9 8E-08 2.7E-12 98.6 18.7 93 6-105 47-142 (368)
410 2fj0_A JuvenIle hormone estera 98.8 1.4E-09 4.8E-14 118.6 5.4 132 493-636 90-233 (551)
411 1ea5_A ACHE, acetylcholinester 98.8 2.8E-09 9.5E-14 115.8 7.6 128 494-637 95-230 (537)
412 1npe_A Nidogen, entactin; glyc 98.8 7.4E-07 2.5E-11 88.1 24.7 222 6-333 11-239 (267)
413 1mda_H Methylamine dehydrogena 98.8 2.3E-07 8E-12 95.1 21.0 126 306-464 219-350 (368)
414 2cb9_A Fengycin synthetase; th 98.8 2.3E-08 8E-13 97.3 11.5 188 512-741 22-227 (244)
415 1ys1_X Lipase; CIS peptide Leu 98.8 3.8E-08 1.3E-12 99.3 13.3 105 512-636 8-114 (320)
416 3tej_A Enterobactin synthase c 98.8 1.5E-08 5E-13 103.7 10.0 194 512-736 101-327 (329)
417 1bu8_A Protein (pancreatic lip 98.8 8.4E-09 2.9E-13 109.2 8.2 109 511-635 69-180 (452)
418 3hrp_A Uncharacterized protein 98.8 2.3E-06 7.9E-11 90.1 26.7 198 33-333 133-355 (409)
419 4gq1_A NUP37; propeller, trans 98.8 3.4E-07 1.2E-11 96.3 19.7 83 4-105 110-206 (393)
420 1thg_A Lipase; hydrolase(carbo 98.7 1.4E-08 4.8E-13 110.4 9.1 130 494-635 106-251 (544)
421 1llf_A Lipase 3; candida cylin 98.7 8.3E-09 2.8E-13 111.9 6.9 131 493-635 97-243 (534)
422 2ovr_B FBW7, F-BOX/WD repeat p 98.7 5.3E-06 1.8E-10 88.7 28.9 268 36-464 123-395 (445)
423 1fwx_A Nitrous oxide reductase 98.7 5.5E-07 1.9E-11 96.1 20.2 208 33-332 87-308 (595)
424 1w52_X Pancreatic lipase relat 98.7 1.5E-08 5.2E-13 107.2 8.1 108 512-635 70-180 (452)
425 3v65_B Low-density lipoprotein 98.7 2.2E-06 7.6E-11 89.4 24.5 179 61-333 95-278 (386)
426 3v65_B Low-density lipoprotein 98.7 6.7E-06 2.3E-10 85.7 28.0 222 157-463 96-321 (386)
427 1jmk_C SRFTE, surfactin synthe 98.7 8.8E-08 3E-12 92.4 12.2 182 512-737 17-227 (230)
428 1dx4_A ACHE, acetylcholinester 98.7 1.8E-08 6.1E-13 110.6 8.1 115 510-636 139-267 (585)
429 2oit_A Nucleoporin 214KDA; NH2 98.7 2E-06 6.9E-11 91.4 23.9 101 175-316 150-259 (434)
430 1rwi_B Serine/threonine-protei 98.7 5.4E-06 1.8E-10 81.8 25.6 222 32-370 25-251 (270)
431 3v64_C Agrin; beta propeller, 98.7 1.3E-05 4.3E-10 82.4 28.8 221 157-462 53-277 (349)
432 2bce_A Cholesterol esterase; h 98.7 1.4E-08 4.8E-13 110.7 6.8 135 494-635 81-222 (579)
433 3v64_C Agrin; beta propeller, 98.7 4.9E-06 1.7E-10 85.5 25.4 179 61-333 52-235 (349)
434 2w18_A PALB2, fancn, partner a 98.7 5E-06 1.7E-10 82.9 24.3 60 176-259 180-243 (356)
435 3icv_A Lipase B, CALB; circula 98.7 1.3E-07 4.4E-12 93.6 12.7 103 512-637 65-170 (316)
436 2zyr_A Lipase, putative; fatty 98.7 4.2E-08 1.4E-12 102.4 9.0 167 512-739 22-230 (484)
437 3n2z_B Lysosomal Pro-X carboxy 98.6 1.7E-07 5.7E-12 98.2 13.0 86 549-637 63-162 (446)
438 1ijq_A LDL receptor, low-densi 98.6 1E-05 3.5E-10 81.9 25.8 179 61-333 9-196 (316)
439 3p5b_L Low density lipoprotein 98.6 1E-05 3.5E-10 84.7 26.3 185 61-341 91-284 (400)
440 1ex9_A Lactonizing lipase; alp 98.6 1.5E-07 5.2E-12 93.7 11.4 103 512-636 7-109 (285)
441 1ijq_A LDL receptor, low-densi 98.6 3.3E-05 1.1E-09 78.1 28.1 224 157-463 10-241 (316)
442 3bix_A Neuroligin-1, neuroligi 98.6 4.7E-08 1.6E-12 107.0 7.1 128 494-635 112-248 (574)
443 3fvz_A Peptidyl-glycine alpha- 98.6 3.1E-05 1.1E-09 78.9 27.8 236 157-460 69-322 (329)
444 2z2n_A Virginiamycin B lyase; 98.6 5.8E-05 2E-09 75.4 29.6 190 32-330 16-211 (299)
445 2x5x_A PHB depolymerase PHAZ7; 98.6 1.5E-07 5.1E-12 95.2 9.9 88 545-637 72-166 (342)
446 1hpl_A Lipase; hydrolase(carbo 98.6 9.2E-08 3.2E-12 100.6 8.4 108 512-635 69-179 (449)
447 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 3.7E-05 1.3E-09 77.6 27.8 234 157-460 46-299 (314)
448 3p5b_L Low density lipoprotein 98.6 3.8E-05 1.3E-09 80.3 28.2 225 157-464 92-324 (400)
449 1rp1_A Pancreatic lipase relat 98.5 9.3E-08 3.2E-12 100.6 8.0 107 512-635 70-179 (450)
450 2ece_A 462AA long hypothetical 98.5 1E-05 3.5E-10 83.3 22.6 252 5-316 106-399 (462)
451 3sov_A LRP-6, low-density lipo 98.5 1.8E-05 6.3E-10 79.8 23.5 186 60-341 11-204 (318)
452 3sov_A LRP-6, low-density lipo 98.5 3.8E-05 1.3E-09 77.4 25.8 223 157-464 13-242 (318)
453 3s94_A LRP-6, low-density lipo 98.5 0.0003 1E-08 77.8 34.5 121 303-467 354-474 (619)
454 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 1.8E-05 6.3E-10 79.9 23.0 238 5-332 46-299 (314)
455 1p22_A F-BOX/WD-repeat protein 98.5 2.5E-05 8.5E-10 83.2 24.9 227 36-405 137-367 (435)
456 1p22_A F-BOX/WD-repeat protein 98.5 1.4E-05 4.9E-10 85.1 22.8 194 4-316 152-353 (435)
457 1q7f_A NHL, brain tumor CG1071 98.5 5.1E-05 1.8E-09 75.4 25.0 227 33-370 32-268 (286)
458 1n7d_A LDL receptor, low-densi 98.4 2.2E-06 7.7E-11 96.5 16.3 180 60-333 384-572 (699)
459 3m0c_C LDL receptor, low-densi 98.4 3.3E-05 1.1E-09 87.4 25.4 227 61-409 403-638 (791)
460 2oit_A Nucleoporin 214KDA; NH2 98.4 1.1E-05 3.6E-10 85.8 19.8 152 32-259 94-258 (434)
461 2qe8_A Uncharacterized protein 98.4 8.5E-05 2.9E-09 76.1 25.6 142 19-224 7-160 (343)
462 3no2_A Uncharacterized protein 98.4 0.00019 6.3E-09 70.9 26.6 181 59-333 12-196 (276)
463 2dst_A Hypothetical protein TT 98.4 2.3E-06 7.8E-11 73.9 11.2 64 552-624 40-103 (131)
464 3hrp_A Uncharacterized protein 98.4 5.6E-05 1.9E-09 79.4 23.6 189 5-283 152-352 (409)
465 3m0c_C LDL receptor, low-densi 98.4 0.00017 5.8E-09 81.7 28.6 224 157-463 404-635 (791)
466 1rwi_B Serine/threonine-protei 98.4 0.00014 4.7E-09 71.5 25.0 215 5-333 46-265 (270)
467 4a0p_A LRP6, LRP-6, low-densit 98.4 0.0015 5.1E-08 72.3 35.7 123 303-468 345-473 (628)
468 2w18_A PALB2, fancn, partner a 98.3 2.7E-05 9.3E-10 77.6 19.4 144 157-327 203-354 (356)
469 3s94_A LRP-6, low-density lipo 98.3 0.0029 1E-07 69.9 37.7 165 244-467 351-517 (619)
470 1fwx_A Nitrous oxide reductase 98.3 5E-06 1.7E-10 88.8 14.3 218 5-261 112-348 (595)
471 4a0p_A LRP6, LRP-6, low-densit 98.3 0.00016 5.4E-09 80.1 26.8 182 60-333 13-198 (628)
472 1n7d_A LDL receptor, low-densi 98.3 1.3E-05 4.3E-10 90.4 17.7 226 157-465 386-619 (699)
473 3fvz_A Peptidyl-glycine alpha- 98.3 0.0002 7E-09 72.8 25.2 229 6-332 70-322 (329)
474 2p4o_A Hypothetical protein; p 98.3 0.00022 7.6E-09 71.6 25.1 209 157-446 53-278 (306)
475 2qc5_A Streptogramin B lactona 98.3 0.00085 2.9E-08 66.8 29.2 272 32-459 21-299 (300)
476 3tjm_A Fatty acid synthase; th 98.2 1.4E-06 4.9E-11 86.7 7.7 69 555-635 49-123 (283)
477 2p4o_A Hypothetical protein; p 98.2 0.00026 8.8E-09 71.2 24.2 244 21-370 22-276 (306)
478 3tc9_A Hypothetical hydrolase; 98.2 0.00047 1.6E-08 72.7 25.4 158 33-284 139-300 (430)
479 2iwa_A Glutamine cyclotransfer 98.1 0.00029 9.8E-09 68.1 20.3 212 177-460 23-237 (266)
480 1q7f_A NHL, brain tumor CG1071 98.1 0.00084 2.9E-08 66.5 24.1 118 157-315 142-267 (286)
481 2z2n_A Virginiamycin B lyase; 98.1 0.0015 5.2E-08 64.8 25.7 192 32-332 58-255 (299)
482 3no2_A Uncharacterized protein 98.0 0.00062 2.1E-08 67.0 22.1 82 3-104 13-94 (276)
483 2iwa_A Glutamine cyclotransfer 98.0 0.00077 2.6E-08 65.1 21.5 165 157-370 44-224 (266)
484 2qc5_A Streptogramin B lactona 98.0 0.0035 1.2E-07 62.2 26.9 192 32-332 63-260 (300)
485 2dsn_A Thermostable lipase; T1 98.0 3.4E-05 1.2E-09 79.0 11.6 37 600-636 103-164 (387)
486 2fp8_A Strictosidine synthase; 98.0 0.0033 1.1E-07 63.4 26.4 147 158-332 102-269 (322)
487 2hih_A Lipase 46 kDa form; A1 98.0 4.2E-05 1.4E-09 79.6 11.9 36 601-636 151-212 (431)
488 3nol_A Glutamine cyclotransfer 97.9 0.0012 4E-08 63.0 19.6 205 177-458 45-254 (262)
489 3qqz_A Putative uncharacterize 97.9 0.0036 1.2E-07 59.9 22.9 180 157-370 49-241 (255)
490 3qqz_A Putative uncharacterize 97.8 0.0052 1.8E-07 58.9 22.4 214 175-459 27-252 (255)
491 3tc9_A Hypothetical hydrolase; 97.7 0.0032 1.1E-07 66.3 22.5 136 157-332 159-301 (430)
492 4hw6_A Hypothetical protein, I 97.7 0.0054 1.8E-07 64.6 23.9 157 33-284 141-303 (433)
493 2fp8_A Strictosidine synthase; 97.7 0.0081 2.8E-07 60.5 23.9 129 176-333 81-217 (322)
494 3kya_A Putative phosphatase; s 97.6 0.0071 2.4E-07 63.9 22.7 164 34-284 142-340 (496)
495 2qe8_A Uncharacterized protein 97.6 0.0014 4.9E-08 66.9 16.6 92 5-106 93-214 (343)
496 2ism_A Putative oxidoreductase 97.6 0.029 9.9E-07 57.2 26.1 122 175-316 75-220 (352)
497 3sre_A PON1, serum paraoxonase 97.6 0.0058 2E-07 61.8 20.0 160 6-217 84-251 (355)
498 3a9g_A Putative uncharacterize 97.5 0.021 7.2E-07 58.2 24.5 152 157-330 49-229 (354)
499 3mbr_X Glutamine cyclotransfer 97.5 0.011 3.7E-07 55.8 19.7 207 176-459 22-234 (243)
500 3nol_A Glutamine cyclotransfer 97.5 0.0036 1.2E-07 59.7 16.4 169 5-261 65-243 (262)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=2.3e-54 Score=498.64 Aligned_cols=608 Identities=14% Similarity=0.074 Sum_probs=420.4
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcc--cc--cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KI--NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~--~~--~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
+|+++++.+ |+.+.+....... .+ ..++|||||++|||...... ........++|++|+++|+.++|+...
T Consensus 37 ~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~-~~r~~~~~~~~~~d~~~~~~~~l~~~~ 111 (740)
T 4a5s_A 37 NILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK-QWRHSYTASYDIYDLNKRQLITEERIP 111 (740)
T ss_dssp EEEEEETTT----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEE-CSSSCEEEEEEEEETTTTEECCSSCCC
T ss_pred cEEEEECCC----CceEEEEechhhhhhcccccceEECCCCCEEEEEECCee-eEEEccceEEEEEECCCCcEEEcccCC
Confidence 699999999 8877664221111 12 23899999999999875211 111244589999999999999997655
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
. .+..++|||||++|+|... .+||+
T Consensus 112 ~-----~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~ 136 (740)
T 4a5s_A 112 N-----NTQWVTWSPVGHKLAYVWN--------------------------------------------------NDIYV 136 (740)
T ss_dssp T-----TEEEEEECSSTTCEEEEET--------------------------------------------------TEEEE
T ss_pred C-----cceeeEECCCCCEEEEEEC--------------------------------------------------CeEEE
Confidence 4 3678899999999999843 48999
Q ss_pred EcC-CCCceecCCCc---eE-----------------EeeeeCCCCceEEEEEecCCccc--cc----------------
Q 004475 162 GSL-DGTAKDFGTPA---VY-----------------TAVEPSPDQKYVLITSMHRPYSY--KV---------------- 202 (751)
Q Consensus 162 ~~~-~G~~~~lt~~~---~~-----------------~~~~~SpDG~~i~~~~~~~~~~~--~~---------------- 202 (751)
+++ +|+.++||..+ .+ ..+.|||||++|+|.+.+..... ..
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 999 66888887641 11 23889999999999876543100 00
Q ss_pred ---ccCCC--ceeEEEEeCCC---c---eeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccc
Q 004475 203 ---PCARF--SQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (751)
Q Consensus 203 ---~~~~~--~~~l~~~d~~~---~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~ 271 (751)
..+.. ...|++||+++ + +.+++.... .+......+..++|||||+. +++....
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~wspdg~~-~~~~~~r-------- 280 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA-------SMLIGDHYLCDVTWATQERI-SLQWLRR-------- 280 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH-------HHHTSCEEEEEEEEEETTEE-EEEEEES--------
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc-------cCCCCCeEEEEEEEeCCCeE-EEEEeCC--------
Confidence 00111 13699999988 6 444442210 00011223557899999996 5543311
Q ss_pred cCcccceeeccCCCCCCCC-------ceEeE-eece---e---EE-EEEecCCceEE-EeeeecccceeEEEecCCCCCC
Q 004475 272 VSPRDIIYTQPAEPAEGEK-------PEILH-KLDL---R---FS-VSWCDDSLALV-NETWYKTSQTRTWLVCPGSKDV 335 (751)
Q Consensus 272 ~~~~~~l~~~~~~~~~~~~-------~~~l~-~~~~---~---~~-~~~spdg~~l~-~~~~~~~~~~~l~~~~~~~~~~ 335 (751)
......|++++++ ++. ...+. .... . .. +.|||||+.|+ +.+. .++..+||++++++ +
T Consensus 281 ~~~~~~i~~~d~~---tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~-~~G~~~l~~~~~~~--~ 354 (740)
T 4a5s_A 281 IQNYSVMDICDYD---ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN-EEGYRHICYFQIDK--K 354 (740)
T ss_dssp STTEEEEEEEEEE---TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC-TTSCEEEEEEETTC--S
T ss_pred CCCEEEEEEEECC---CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEc-CCCceEEEEEECCC--C
Confidence 1123478999886 333 23332 2111 1 34 89999999998 5543 35568999999998 4
Q ss_pred cceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCcee-EEeec-c
Q 004475 336 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWES-N 413 (751)
Q Consensus 336 ~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~-~ 413 (751)
..++|+.....-. ..+++||+.|+|.+... .....+.+||+++++++..+ +|+.. .
T Consensus 355 ~~~~lT~g~~~v~--------~~~~~d~~~i~f~~~~~--------------~~~~~~~~ly~v~~~g~~~~~~lt~~~~ 412 (740)
T 4a5s_A 355 DCTFITKGTWEVI--------GIEALTSDYLYYISNEY--------------KGMPGGRNLYKIQLIDYTKVTCLSCELN 412 (740)
T ss_dssp SCEESCCSSSCEE--------EEEEECSSEEEEEESCG--------------GGCTTCBEEEEEETTEEEEEEESSTTTS
T ss_pred ceEecccCCEEEE--------EEEEEeCCEEEEEEecC--------------CCCCceeEEEEEECCCCCcceeeccccC
Confidence 6678886643321 22457799999988320 01234679999999876554 44321 0
Q ss_pred chhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC----CCCccCCceEEEEEEcC
Q 004475 414 REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRK 489 (751)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~----~~~~~~~~~e~i~~~~~ 489 (751)
.. ......++|||||+.++++..++. ++.+++++..+++..+++..+.. .........+.+++ ..
T Consensus 413 ~~---------~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~ 481 (740)
T 4a5s_A 413 PE---------RCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-IL 481 (740)
T ss_dssp TT---------TBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EE
T ss_pred CC---------CCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-cc
Confidence 00 011234689999999999998877 88999999988887777655421 12233334677777 67
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~~g~ 568 (751)
+|..+.+++++|+++++.+ ++|+||++||++.... ....+.......++ ++||+|+++++++..+.
T Consensus 482 dg~~l~~~~~~P~~~~~~~--~~P~vv~~HGg~~~~~-----------~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~ 548 (740)
T 4a5s_A 482 NETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQK-----------ADTVFRLNWATYLASTENIIVASFDGRGSGYQ 548 (740)
T ss_dssp TTEEEEEEEEECTTCCTTS--CEEEEEECCCCTTCCC-----------CCCCCCCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred CCeEEEEEEEeCCCCCCCC--CccEEEEECCCCcccc-----------cccccCcCHHHHHHhcCCeEEEEEcCCCCCcC
Confidence 8899999999999875443 5999999999863211 01111222345556 59999999666543332
Q ss_pred CCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCc
Q 004475 569 GDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF 645 (751)
Q Consensus 569 g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~ 645 (751)
|.... ...+....++|+.+++++|.+++.+|++||+|+||||||++|+.++.++|++|+++|+.+|+.++......+
T Consensus 549 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~ 628 (740)
T 4a5s_A 549 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVY 628 (740)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHH
T ss_pred ChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHH
Confidence 22110 111223458999999999998888999999999999999999999999999999999999998754322111
Q ss_pred ccc-ccc--chhhHHHHHhcCcccccCCCCC-CEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc
Q 004475 646 QTE-FRT--LWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 721 (751)
Q Consensus 646 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 721 (751)
... ... .+...+.|...++...++++++ |+|++||+.|..|| +.++.+++++|.+++++++++++|+++|.+..
T Consensus 629 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~ 706 (740)
T 4a5s_A 629 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIAS 706 (740)
T ss_dssp HHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCS
T ss_pred HHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCC
Confidence 100 112 2456677888899999999986 99999999999999 99999999999999999999999999999866
Q ss_pred cccHHHHHHHHHHHHHHHhcCC
Q 004475 722 RENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 722 ~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
.+....+...+.+||.++++..
T Consensus 707 ~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 707 STAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHHHHcCCC
Confidence 6777889999999999999753
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=5.9e-52 Score=481.02 Aligned_cols=588 Identities=16% Similarity=0.187 Sum_probs=415.2
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCc-----------------------ccccceeecCCCCeEEEEEeecccccccCCc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDG-----------------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCK 61 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~-----------------------~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~ 61 (751)
..|+++|+.+ |+.+++...... ..+..++|||||++|+|.+.
T Consensus 64 ~~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----------- 128 (741)
T 2ecf_A 64 LDLWSYDIGS----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----------- 128 (741)
T ss_dssp EEEEEEETTT----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-----------
T ss_pred cEEEEEECCC----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-----------
Confidence 4799999999 988877632211 12688999999999999641
Q ss_pred eeEEEEEcCCC---CeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 62 LRVWIADAETG---EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 62 ~~l~i~~~~~g---~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.+||+++++++ +.++++.... .+..++|||||++|+|.+.
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~SPDG~~la~~~~-------------------------------- 171 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEG-----FATDAKLSPKGGFVSFIRG-------------------------------- 171 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSS-----CEEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcEEEEECCCCCcceEEEcccCCc-----ccccccCCCCCCEEEEEeC--------------------------------
Confidence 79999999999 8888876543 3678899999999999842
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ce-----------------EEeeeeCCCCceEEEEEecCCcc
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AV-----------------YTAVEPSPDQKYVLITSMHRPYS 199 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~-----------------~~~~~~SpDG~~i~~~~~~~~~~ 199 (751)
.+|+++++ +|+.++++.. .. +..++|||||++|++.+.+....
T Consensus 172 ------------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 172 ------------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPV 233 (741)
T ss_dssp ------------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTS
T ss_pred ------------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCC
Confidence 37999999 6677777654 21 36789999999999987653210
Q ss_pred -------------------cccc-cCCCceeEEEEeCCC-ceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEE
Q 004475 200 -------------------YKVP-CARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (751)
Q Consensus 200 -------------------~~~~-~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~ 258 (751)
+... .......|++||+++ ++.+.+.... .....+..++| |||++ |+
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~-pDg~~-l~ 301 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGK----------EQDIYLARVNW-RDPQH-LS 301 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCS----------CSSEEEEEEEE-EETTE-EE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCC----------CcceEEEEEEe-CCCCE-EE
Confidence 0000 000123799999988 7766553221 11123557899 99999 66
Q ss_pred EEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece-----eEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~-----~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
+..... ......|++++++ ++....+..... ... +.|||||+ +++.+.. .+..+||.++.++
T Consensus 302 ~~~~~~-------~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~-~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 302 FQRQSR-------DQKKLDLVEVTLA---SNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSER-TGFQHLYRIDSKG 369 (741)
T ss_dssp EEEEET-------TSSEEEEEEEETT---TCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECT-TSSCEEEEECSSS
T ss_pred EEEecc-------cCCeEEEEEEECC---CCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecC-CCccEEEEEcCCC
Confidence 654211 1123589999986 445555544322 234 89999999 5555533 3456899999876
Q ss_pred CCCcceeeeecccccccCCCCCCCe-eeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 333 KDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 333 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
. .+.++..... +.. + .|||||+.|++.+... .....+||.++..++..++|..
T Consensus 370 --~-~~~l~~~~~~-v~~------~~~~s~dg~~l~~~~~~~----------------~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 370 --K-AAALTHGNWS-VDE------LLAVDEKAGLAYFRAGIE----------------SARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp --C-EEESCCSSSC-EEE------EEEEETTTTEEEEEECSS----------------CTTCBEEEEEETTCCCCEECCC
T ss_pred --C-eeeeeecceE-EEe------EeEEeCCCCEEEEEEeCC----------------CCceEEEEEEEcCCCCeeeccc
Confidence 3 4556544322 111 3 5999999999887321 1124568888776655566644
Q ss_pred ccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCC-----CCCCc--cCCceEEE
Q 004475 412 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-----PYPTL--ASLQKEMI 484 (751)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~-----~~~~~--~~~~~e~i 484 (751)
... +. .++|||||+.|++...+...|+.+|++++.++..+.|+.... ..... .....+.+
T Consensus 424 ~~~------~~-------~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (741)
T 2ecf_A 424 APG------MH-------SASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFG 490 (741)
T ss_dssp SCS------EE-------EEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEE
T ss_pred CCC------ce-------EEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEE
Confidence 211 21 358999999999999999999999999987766666654322 11112 33468999
Q ss_pred EEEcCCC-ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCc-hHHHHHHhCCeEEEEcCC
Q 004475 485 KYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGPS 562 (751)
Q Consensus 485 ~~~~~~~-~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~~~ 562 (751)
.++..+| ..+.++++.|+++.+. +++|+||++||++.... ....+..... .....|+++||+|+++++
T Consensus 491 ~~~~~~g~~~l~~~~~~P~~~~~~--~~~p~vv~~hG~~~~~~--------~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 560 (741)
T 2ecf_A 491 TLTAADGKTPLNYSVIKPAGFDPA--KRYPVAVYVYGGPASQT--------VTDSWPGRGDHLFNQYLAQQGYVVFSLDN 560 (741)
T ss_dssp EEECTTSSCEEEEEEECCSSCCTT--SCEEEEEECCCSTTCCS--------CSSCCCCSHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEcCCCCEEEEEEEEeCCCCCCC--CCcCEEEEEcCCCCccc--------ccccccccchhHHHHHHHhCCCEEEEEec
Confidence 9998899 8999999999875433 35899999999763210 0011111000 356788899999999555
Q ss_pred CCCCCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 563 IPIIGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 563 ~~~~g~g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
+|+|.+... ..+....++|+.++++++.++..+|+++|+|+||||||++|+.++.++|++++++|+.+|..
T Consensus 561 ---rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 637 (741)
T 2ecf_A 561 ---RGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVT 637 (741)
T ss_dssp ---TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred ---CCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCc
Confidence 455553211 11112457999999999999888888999999999999999999999999999999999987
Q ss_pred CCCCCccCcc-cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475 637 NKTLTPFGFQ-TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 715 (751)
Q Consensus 637 d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (751)
++......+. .....++...+.|...++...+.++++|+|++||++|..+| +.++++++++|+..+++++++++|++
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (741)
T 2ecf_A 638 DWGLYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGA 715 (741)
T ss_dssp CGGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTC
T ss_pred chhhhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCC
Confidence 6432111010 01123444566777788988899999999999999999999 99999999999999999999999999
Q ss_pred CCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 716 HHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 716 ~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+|.+..... .++.+.+.+||+++|+
T Consensus 716 ~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 716 KHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp CSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred CCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 999864333 7888999999999985
No 3
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=7e-51 Score=469.18 Aligned_cols=586 Identities=15% Similarity=0.142 Sum_probs=406.2
Q ss_pred eeEEeecCCCCCCCCc--ccccCCCCc---------------ccccceeecCCCCeEEEEEeecccccccCCceeEEEEE
Q 004475 6 GIGIHRLLPDDSLGPE--KEVHGYPDG---------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIAD 68 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~--~~l~~~~~~---------------~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~ 68 (751)
+| ++|+.+ |+. +.+...... ..+...+|||| ++|+|.. ...||+++
T Consensus 45 ~i-~~d~~t----g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-----------~~~i~~~d 107 (706)
T 2z3z_A 45 DL-VFNKAN----GKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-----------QGGLVGFD 107 (706)
T ss_dssp EE-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-----------TTEEEEEE
T ss_pred cE-EEECCC----CcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-----------CCEEEEEE
Confidence 47 899988 887 555421100 24778999999 8898853 27999999
Q ss_pred cCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccch
Q 004475 69 AETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE 148 (751)
Q Consensus 69 ~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (751)
+++++.++++.... .+..++|||||++|+|...
T Consensus 108 ~~~~~~~~l~~~~~-----~~~~~~~SpdG~~la~~~~------------------------------------------ 140 (706)
T 2z3z_A 108 MLARKVTYLFDTNE-----ETASLDFSPVGDRVAYVRN------------------------------------------ 140 (706)
T ss_dssp TTTTEEEEEECCTT-----CCTTCEECTTSSEEEEEET------------------------------------------
T ss_pred CCCCceEEccCCcc-----cccCCcCCCCCCEEEEEEC------------------------------------------
Confidence 99999888876543 2567899999999999722
Q ss_pred hhhhhheeeEEEEEcC-C-----CCceecCCC-ce---------------EEeeeeCCCCceEEEEEecCCcc-------
Q 004475 149 SLFDYYTTAQLVLGSL-D-----GTAKDFGTP-AV---------------YTAVEPSPDQKYVLITSMHRPYS------- 199 (751)
Q Consensus 149 ~~~~~~~~~~l~~~~~-~-----G~~~~lt~~-~~---------------~~~~~~SpDG~~i~~~~~~~~~~------- 199 (751)
..|+++++ + |+.++++.. .. +..++|||||++|++.+.+....
T Consensus 141 --------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 141 --------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp --------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred --------CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeec
Confidence 47999999 6 777777655 22 37899999999999987432100
Q ss_pred ------------cccc-cCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 200 ------------YKVP-CARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 200 ------------~~~~-~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
|... .......|++||+++++.+.+.... .....+..++|||||++ |++.+.. .
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~----------~~~~~~~~~~~spdg~~-l~~~~~~-~- 279 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE----------PKEKFLTNLSWSPDENI-LYVAEVN-R- 279 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS----------CTTCEEEEEEECTTSSE-EEEEEEC-T-
T ss_pred cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC----------CCceeEeeEEEECCCCE-EEEEEeC-C-
Confidence 0000 0112367999999988776553221 11123568999999998 6665421 1
Q ss_pred CCccccCcccceeeccCCCCCCC-CceEeEee-ce----eEE-EEEec--CCceEEEeeeecccceeEEEecCCCCCCcc
Q 004475 267 DANVEVSPRDIIYTQPAEPAEGE-KPEILHKL-DL----RFS-VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAP 337 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~~~-~~----~~~-~~~sp--dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 337 (751)
......|++++++ ++ ..+.+... .. ... +.||| ||+.|+. +.. .+..+||.++.++ ...
T Consensus 280 -----~~~~~~v~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~-~~~-~g~~~l~~~~~~~--~~~ 347 (706)
T 2z3z_A 280 -----AQNECKVNAYDAE---TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ-SRR-DGWNHLYLYDTTG--RLI 347 (706)
T ss_dssp -----TSCEEEEEEEETT---TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE-ECT-TSSCEEEEEETTS--CEE
T ss_pred -----CCCeeEEEEEECC---CCceeeEEEEccCCCeECccCCceeecCCCCEEEEE-Ecc-CCccEEEEEECCC--CEE
Confidence 1123489999986 33 34444322 11 123 79999 9996544 332 3457899999766 344
Q ss_pred eeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhh
Q 004475 338 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 417 (751)
Q Consensus 338 ~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 417 (751)
+.++.....-.. .++|||||+.|++.+... ......|+++|+++++.+.+.....
T Consensus 348 ~~l~~~~~~v~~------~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~d~~~~~~~~l~~~~~--- 402 (706)
T 2z3z_A 348 RQVTKGEWEVTN------FAGFDPKGTRLYFESTEA----------------SPLERHFYCIDIKGGKTKDLTPESG--- 402 (706)
T ss_dssp EECCCSSSCEEE------EEEECTTSSEEEEEESSS----------------CTTCBEEEEEETTCCCCEESCCSSS---
T ss_pred EecCCCCeEEEe------eeEEcCCCCEEEEEecCC----------------CCceEEEEEEEcCCCCceeccCCCc---
Confidence 555543221100 157999999999988321 1124589999999887666653221
Q ss_pred hhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCCccCCceEEEEEEcCCC-ceEEE
Q 004475 418 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDG-VPLTA 496 (751)
Q Consensus 418 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~~~~~-~~i~~ 496 (751)
+ ..++|||||+.+++...+...|+.++++|+.+++...++..+ ..........+.+.++..+| ..+.+
T Consensus 403 ---~-------~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 471 (706)
T 2z3z_A 403 ---M-------HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYY 471 (706)
T ss_dssp ---E-------EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC-------CCCCEEEEEEECTTSSSEEEE
T ss_pred ---e-------EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEE
Confidence 1 235899999999999888888999999999988744455432 23334445678899998888 89999
Q ss_pred EEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC---
Q 004475 497 TLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--- 573 (751)
Q Consensus 497 ~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~--- 573 (751)
+++.|+++.+.+ ++|+||++||++.... ....|..........|+++||+|+++|+ +|+|.+..
T Consensus 472 ~~~~P~~~~~~~--~~p~iv~~HGg~~~~~--------~~~~~~~~~~~~~~~la~~G~~v~~~d~---rG~g~s~~~~~ 538 (706)
T 2z3z_A 472 KLTMPLHFDPAK--KYPVIVYVYGGPHAQL--------VTKTWRSSVGGWDIYMAQKGYAVFTVDS---RGSANRGAAFE 538 (706)
T ss_dssp EEECCTTCCTTS--CEEEEEECCCCTTCCC--------CCSCC----CCHHHHHHHTTCEEEEECC---TTCSSSCHHHH
T ss_pred EEEeCCCCCCCC--CccEEEEecCCCCcee--------eccccccCchHHHHHHHhCCcEEEEEec---CCCcccchhHH
Confidence 999998765433 5899999999753211 0011211111256788899999999555 45554321
Q ss_pred ---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcc-ccc
Q 004475 574 ---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ-TEF 649 (751)
Q Consensus 574 ---~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~-~~~ 649 (751)
...+....++|+.+++++|.+++.+|.++|+|+||||||++|+.++.++|++++++|+.+|+.++......+. ...
T Consensus 539 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~ 618 (706)
T 2z3z_A 539 QVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYF 618 (706)
T ss_dssp HTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHH
T ss_pred HHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHhhhhhhhc
Confidence 1122245579999999999988888889999999999999999999999999999999999876432211110 011
Q ss_pred ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475 650 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 729 (751)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (751)
..++...+.+...++...+.++++|+|++||++|.++| +.++++++++|+..+.+++++++|+++|.+... ...++.
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~ 695 (706)
T 2z3z_A 619 DAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLY 695 (706)
T ss_dssp CCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHH
T ss_pred CCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCC--HHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHH
Confidence 23344566777888888899999999999999999999 999999999999888899999999999998744 667889
Q ss_pred HHHHHHHHHHh
Q 004475 730 WETDRWLQKYC 740 (751)
Q Consensus 730 ~~~~~fl~~~l 740 (751)
+.+.+||.++|
T Consensus 696 ~~i~~fl~~~l 706 (706)
T 2z3z_A 696 ETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 4
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=7.1e-52 Score=479.08 Aligned_cols=609 Identities=13% Similarity=0.053 Sum_probs=403.7
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcc--cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~--~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~ 82 (751)
..|++||+.+ |+.+.+....... .+..++|||||++|||...... ........+||++++++++.++++....
T Consensus 37 g~i~~~d~~~----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 37 GTVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-IYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp SCEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-CSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CCEEEEECCC----CcEEEEeccccccccccceEEECCCCCEEEEEecCcc-ceeecceeeEEEEECCCCceEeccCCcc
Confidence 3699999998 8887765322211 3788999999999999864211 1111334799999999999888875543
Q ss_pred ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
.. ..+..++|||||++|+|.+. .+||++
T Consensus 112 ~~--~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~ 139 (723)
T 1xfd_A 112 SN--AKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYC 139 (723)
T ss_dssp CS--CCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEE
T ss_pred cc--ccccccEECCCCCEEEEEEC--------------------------------------------------CeEEEE
Confidence 21 12567899999999999843 379999
Q ss_pred cC-CCCceecCCC--ceE------------------EeeeeCCCCceEEEEEecCCcc--ccc-----------------
Q 004475 163 SL-DGTAKDFGTP--AVY------------------TAVEPSPDQKYVLITSMHRPYS--YKV----------------- 202 (751)
Q Consensus 163 ~~-~G~~~~lt~~--~~~------------------~~~~~SpDG~~i~~~~~~~~~~--~~~----------------- 202 (751)
++ +|+.++++.. ..+ ..++|||||++|++.+.+.... +..
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 99 6677777654 222 5799999999999987653210 000
Q ss_pred ccC--CCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCccccee
Q 004475 203 PCA--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIY 279 (751)
Q Consensus 203 ~~~--~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~ 279 (751)
..+ .....|++||+++++. +++..... +......+..++|||||+. |++.... ......|+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~SpDg~~-l~~~~~~--------~~~~~~i~ 283 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDD-------PRMREYYITMVKWATSTKV-AVTWLNR--------AQNVSILT 283 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCC-------GGGSSEEEEEEEESSSSEE-EEEEEET--------TSCEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCcc-------CCCccceeEEEEEeCCCeE-EEEEEcC--------CCCeEEEE
Confidence 001 1124799999988763 44432210 0011223457899999997 5443311 11235799
Q ss_pred eccCCCCCCCCceEeEee--cee----EE-EEEecCCceEEEeeeeccc----ceeEEEec-CCCCCCc---ceeeeecc
Q 004475 280 TQPAEPAEGEKPEILHKL--DLR----FS-VSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRV 344 (751)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~--~~~----~~-~~~spdg~~l~~~~~~~~~----~~~l~~~~-~~~~~~~---~~~l~~~~ 344 (751)
+++++ ++....+... .+. .. +.|||||+.|++.+....+ ..+||+++ ..++ . .+.++...
T Consensus 284 ~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~l~~~~ 358 (723)
T 1xfd_A 284 LCDAT---TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS--SNDNIQSITSGD 358 (723)
T ss_dssp EEETT---TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS--SSCCCCBSCCSS
T ss_pred EEeCC---CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC--CccceeEeecCC
Confidence 99986 4444444322 111 14 8999999999987332222 45899999 5553 3 45565432
Q ss_pred cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCC-ceeEEeeccchhhhhceee
Q 004475 345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAVA 423 (751)
Q Consensus 345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~~ 423 (751)
..... .++|||||+.|+|.+.+. .....+||.+++.++ +...+...-..
T Consensus 359 ~~~~~------~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~~-------- 408 (723)
T 1xfd_A 359 WDVTK------ILAYDEKGNKIYFLSTED----------------LPRRRQLYSANTVGNFNRQCLSCDLVE-------- 408 (723)
T ss_dssp SCEEE------EEEEETTTTEEEEEESSS----------------CTTCCEEEEECSSTTCCCBCSSTTSSS--------
T ss_pred eEEEe------eeEEcCCCCEEEEEEcCC----------------CCcceEEEEEeCCCCCCcceecccccC--------
Confidence 22111 157999999999987320 113457888887654 33334321000
Q ss_pred eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC----CCCccCCceEEEEEEcCCCceEEEEEE
Q 004475 424 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVPLTATLY 499 (751)
Q Consensus 424 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~----~~~~~~~~~e~i~~~~~~~~~i~~~~~ 499 (751)
......++|||||+.|++...++..|..++ .+..+++...+...+.. .........+.+.++..+| ++.++++
T Consensus 409 -~~~~~~~~~spdg~~l~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~ 485 (723)
T 1xfd_A 409 -NCTYFSASFSHSMDFFLLKCEGPGVPMVTV-HNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQIL 485 (723)
T ss_dssp -SCCCCEEEECTTSSEEEEECCSSSSCCEEE-EETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEE
T ss_pred -CCCeEEEEECCCCCEEEEEccCCCCCeEEE-EECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEE
Confidence 011223689999999999998888777655 47655554333322210 1122223567788888888 9999999
Q ss_pred cCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC------CC
Q 004475 500 LPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK------LP 573 (751)
Q Consensus 500 ~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~------~~ 573 (751)
.|+++.+. +++|+||++||+++... ....+. .......++++||+|++++++ |+|.. ..
T Consensus 486 ~P~~~~~~--~~~p~vv~~HG~~~~~~--------~~~~~~--~~~~~~~l~~~G~~vv~~d~r---G~g~~g~~~~~~~ 550 (723)
T 1xfd_A 486 KPATFTDT--THYPLLLVVDGTPGSQS--------VAEKFE--VSWETVMVSSHGAVVVKCDGR---GSGFQGTKLLHEV 550 (723)
T ss_dssp BCSSCCSS--SCEEEEEECCCCTTCCC--------CCCCCC--CSHHHHHHHTTCCEEECCCCT---TCSSSHHHHHHTT
T ss_pred eCCCCCCC--CccCEEEEEcCCCCccc--------cCcccc--ccHHHHHhhcCCEEEEEECCC---CCccccHHHHHHH
Confidence 99876443 35899999999863210 001111 113344566799999996554 44432 01
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEccCCCCCCCCccCccc-c
Q 004475 574 NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLTPFGFQT-E 648 (751)
Q Consensus 574 ~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~~d~~~~~~~~~~-~ 648 (751)
...+....++|+.++++++.++..+|++||+|+||||||++|+.++.++ |++++++|+.+|+.++......+.. .
T Consensus 551 ~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 630 (723)
T 1xfd_A 551 RRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERY 630 (723)
T ss_dssp TTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHH
T ss_pred HhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhh
Confidence 1112234678999999999988778889999999999999999999999 9999999999998775432110000 0
Q ss_pred cccchhhHHHHHhcCcccccCCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHH
Q 004475 649 FRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 727 (751)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 727 (751)
...++...+.+...++...+.+++ +|+|++||++|..+| +.++++++++|+..+.+++++++|+++|.+...+....
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 708 (723)
T 1xfd_A 631 LGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQH 708 (723)
T ss_dssp HCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHH
T ss_pred cCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHH
Confidence 011222223344556667788898 799999999999999 99999999999999999999999999999865666778
Q ss_pred HHHHHHHHHHHHhc
Q 004475 728 VIWETDRWLQKYCL 741 (751)
Q Consensus 728 ~~~~~~~fl~~~l~ 741 (751)
+.+.+.+||.++++
T Consensus 709 ~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 709 LYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998774
No 5
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=3.6e-49 Score=451.36 Aligned_cols=580 Identities=16% Similarity=0.150 Sum_probs=405.9
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc---c-ceeeeeEEe--cCCcE-EEEe
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL---N-AVFGSFVWV--NNSTL-LIFT 104 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~---~-~~~~~~~ws--pDg~~-l~~~ 104 (751)
.+..|+|||| +++|++.+..+ ++...||++ ..+++.++||....... + .+-..+.|+ |||++ |+|.
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~~~----~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRPAE----AGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp CCEEEEEETT--EEEEEEEETTT----TTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred ccceeEEcCC--eEEEEecCccc----CCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 5788999965 78888753211 445789988 56788999987653210 0 000156677 99999 9998
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC----CCceecCC-----C-
Q 004475 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGT-----P- 174 (751)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----G~~~~lt~-----~- 174 (751)
... ..+||+++++ |+.++|+. +
T Consensus 98 ~~~------------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HFG------------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BTT------------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred ECC------------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 431 1479999997 77888887 4
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC------ceeeeec-cCCCCCCCCCccCCccCCCcee
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMRSI 247 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 247 (751)
..+..++|||||++|++.+.+.... .......+|++|++++ ++.++++ .... .+..+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE---GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR-------------FVTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS---STTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS-------------EECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCC---CCCCceeEEEEEECCCCccccCCceeEEEecCCC-------------cccCc
Confidence 5677999999999999987642100 0011136899999998 7777765 3221 23367
Q ss_pred eeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCC--CCceEeEee-ceeEE-EEEecCCceEEEeeeecccce
Q 004475 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG--EKPEILHKL-DLRFS-VSWCDDSLALVNETWYKTSQT 323 (751)
Q Consensus 248 ~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~l~~~-~~~~~-~~~spdg~~l~~~~~~~~~~~ 323 (751)
+|||||++ |++++...... .....+|++++++ .++ ...+.++.. ..... +.|||||+ |+|.++.. +..
T Consensus 194 ~~SpDG~~-la~~~~~~~~~----~~~~~~i~~~d~~-~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~-~~~ 265 (662)
T 3azo_A 194 RLSPDGRQ-AVWLAWDHPRM----PWEGTELKTARVT-EDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT-GWW 265 (662)
T ss_dssp EECTTSSE-EEEEEECTTCC----TTTCEEEEEEEEC-TTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT-SSC
T ss_pred eECCCCCE-EEEEECCCCCC----CCCCcEEEEEEEC-CCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC-CCe
Confidence 99999999 77765322111 1123589999985 112 145556554 45666 99999999 77877543 345
Q ss_pred eEEEecCCCCCCcceeeeecccccc---cCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEe
Q 004475 324 RTWLVCPGSKDVAPRVLFDRVFENV---YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 400 (751)
Q Consensus 324 ~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 400 (751)
.||+++++++ +.+.++....... |. ++...++|+|||+.++... . ...+|+++|
T Consensus 266 ~l~~~~~~~~--~~~~l~~~~~~~~~p~w~-~~~~~~~~~~~~~~~~~~~-------------------~-~~~~l~~~d 322 (662)
T 3azo_A 266 NLHRVDPATG--AATQLCRREEEFAGPLWT-PGMRWFAPLANGLIAVVHG-------------------K-GAAVLGILD 322 (662)
T ss_dssp EEEEECTTTC--CEEESSCCSSBSSCCCCS-TTCCSEEECTTSCEEEEEB-------------------S-SSCEEEEEE
T ss_pred EEEEEECCCC--ceeecccccccccCcccc-ccCceEeEeCCCEEEEEEE-------------------c-CccEEEEEE
Confidence 8999998774 4556654322210 00 0011144556665433322 1 345899999
Q ss_pred cCCCceeEEeeccchhhhhceeeeecCCcceee-ccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCC-ccC
Q 004475 401 INTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPT-LAS 478 (751)
Q Consensus 401 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~-~~~ 478 (751)
+++++.++|...... + ..+ ++|++.+++...+...+..||++++.+++.++|+........ ...
T Consensus 323 ~~~~~~~~l~~~~~~-----~---------~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~ 388 (662)
T 3azo_A 323 PESGELVDAAGPWTE-----W---------AATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYY 388 (662)
T ss_dssp TTTTEEEECCSSCCE-----E---------EEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGS
T ss_pred CCCCcEEEecCCCCe-----E---------EEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCcccc
Confidence 988877666433211 1 123 788999999998988899999999999999999876543222 222
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCC--CCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYD--QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~--~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
...+.+.+...++..+.++++.|++.. ....+++|+||++||++.... ..........|+++||+
T Consensus 389 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l~~~G~~ 455 (662)
T 3azo_A 389 PEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRV-------------PAVLDLDVAYFTSRGIG 455 (662)
T ss_dssp CCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCC-------------CCSCCHHHHHHHTTTCE
T ss_pred CcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccC-------------cccchHHHHHHHhCCCE
Confidence 357889999888899999999998753 001235899999999863211 01122456788899999
Q ss_pred EEEcCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcc
Q 004475 557 VLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 633 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 633 (751)
|+++++++..|+|.+.. ...+....++|+.++++++.++..+|+++|+|+||||||++|+.++.+ |++|+++|+.+
T Consensus 456 v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~ 534 (662)
T 3azo_A 456 VADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLY 534 (662)
T ss_dssp EEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEES
T ss_pred EEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecC
Confidence 99977776666765421 112223458999999999999988999999999999999999998887 89999999999
Q ss_pred CCCCCCCC------ccC--cc-cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC
Q 004475 634 GSYNKTLT------PFG--FQ-TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 704 (751)
Q Consensus 634 ~~~d~~~~------~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~ 704 (751)
|+.+.... .+. +. ..........+.+...++..++.++++|+|++||++|.++| +.++++++++|+..+
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g 612 (662)
T 3azo_A 535 PVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFLEAVAGCG 612 (662)
T ss_dssp CCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHTTSC
T ss_pred CccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHHHHHHHcC
Confidence 98763211 000 00 00111124456778889999999999999999999999999 999999999999999
Q ss_pred CcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 705 ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 705 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
.+++++++++++|.+...+...++...+++||.++++..
T Consensus 613 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 613 VPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp CCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999998766667889999999999999753
No 6
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2e-50 Score=453.97 Aligned_cols=537 Identities=15% Similarity=0.111 Sum_probs=386.9
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...++||||++|||++.+ ++..+||.+ ++|+.+++|..... .+..++|||| + |+|.+....+.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~----~~~~~~~spd-~-~l~~~~~~~g~ 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPIN----SVLDPHYGVG-R-VILVRDVSKGA 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCS----EECEECTTCS-E-EEEEEECSTTS
T ss_pred chheeecCCCCCeEEEEEcc-------CCceeEEEE--cCCCcEeeeccccc----ccccccCCCC-e-EEEEeccCCCC
Confidence 47788999999999998743 455778886 58999999876632 3678899999 4 66654321111
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC--CCCceecCCCceEEeeeeCCCCceE
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYV 189 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~G~~~~lt~~~~~~~~~~SpDG~~i 189 (751)
....||.+++ +|...+++........+|||||+.+
T Consensus 88 -------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 88 -------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAV 124 (582)
T ss_dssp -------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCE
T ss_pred -------------------------------------------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeE
Confidence 1158999999 7866677766445567999999998
Q ss_pred EEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (751)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~ 269 (751)
++.+... ..+.+||+++++.++++..+. ..++|||||++ |++.+...
T Consensus 125 ~~~s~~~------------~~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~-la~~~~~~----- 171 (582)
T 3o4h_A 125 VFTGATE------------DRVALYALDGGGLRELARLPG---------------FGFVSDIRGDL-IAGLGFFG----- 171 (582)
T ss_dssp EEEEECS------------SCEEEEEEETTEEEEEEEESS---------------CEEEEEEETTE-EEEEEEEE-----
T ss_pred EEEecCC------------CCceEEEccCCcEEEeecCCC---------------ceEEECCCCCE-EEEEEEcC-----
Confidence 8876542 234488999888887765432 36799999999 66654221
Q ss_pred cccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccc
Q 004475 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 348 (751)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 348 (751)
.....||+++++ ++..+.++...+... ++|||||+.|+ .+. ..+..+||+++++++ +.+ ++......+
T Consensus 172 ---~~~~~i~~~d~~---~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~-~~~~~~i~~~d~~~~--~~~-~~~~~~~~~ 240 (582)
T 3o4h_A 172 ---GGRVSLFTSNLS---SGGLRVFDSGEGSFSSASISPGMKVTA-GLE-TAREARLVTVDPRDG--SVE-DLELPSKDF 240 (582)
T ss_dssp ---TTEEEEEEEETT---TCCCEEECCSSCEEEEEEECTTSCEEE-EEE-CSSCEEEEEECTTTC--CEE-ECCCSCSHH
T ss_pred ---CCCeEEEEEcCC---CCCceEeecCCCccccceECCCCCEEE-Ecc-CCCeeEEEEEcCCCC--cEE-EccCCCcCh
Confidence 122469999986 667778877777777 99999999998 332 233468999999885 334 332221111
Q ss_pred cCCCCCCCee--------eCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhc
Q 004475 349 YSDPGSPMMT--------RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 420 (751)
Q Consensus 349 ~~~~~~~~~~--------~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 420 (751)
.. ++ ||||| .+++..... ..+.+|++ |+..+.. .. .
T Consensus 241 ~~------~~~~~~~~~~~spdg-~~~~~~~~~--------------------g~~~l~~~--g~~~~~~--~~-----~ 284 (582)
T 3o4h_A 241 SS------YRPTAITWLGYLPDG-RLAVVARRE--------------------GRSAVFID--GERVEAP--QG-----N 284 (582)
T ss_dssp HH------HCCSEEEEEEECTTS-CEEEEEEET--------------------TEEEEEET--TEEECCC--SS-----E
T ss_pred hh------hhhccccceeEcCCC-cEEEEEEcC--------------------CcEEEEEE--CCeeccC--CC-----c
Confidence 11 45 99999 666666321 14556666 5433211 11 1
Q ss_pred eeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCC---ccCCceEEEEEEcCCCceEEEE
Q 004475 421 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPT---LASLQKEMIKYQRKDGVPLTAT 497 (751)
Q Consensus 421 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~---~~~~~~e~i~~~~~~~~~i~~~ 497 (751)
+. .++|| ||+ ++++..+...|+.+|++++.+ +.++| .... ......+.+.++..+|..+.++
T Consensus 285 v~-------~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 349 (582)
T 3o4h_A 285 HG-------RVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRSIAGSRLVWVESFDGSRVPTY 349 (582)
T ss_dssp EE-------EEEEE-TTE-EEEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHTEEEEEEEEEECTTSCEEEEE
T ss_pred eE-------EEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccccCcceEEEEECCCCCEEEEE
Confidence 11 25788 775 556777888899999999765 55554 1112 3345688999998899999999
Q ss_pred EEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC---C
Q 004475 498 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---N 574 (751)
Q Consensus 498 ~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~---~ 574 (751)
++.|++..+ ++|+||++||+++... ..........|+++||+|+++++++..|+|.+.. .
T Consensus 350 ~~~p~~~~~----~~p~vv~~HG~~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~ 412 (582)
T 3o4h_A 350 VLESGRAPT----PGPTVVLVHGGPFAED-------------SDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKII 412 (582)
T ss_dssp EEEETTSCS----SEEEEEEECSSSSCCC-------------CSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred EEcCCCCCC----CCcEEEEECCCccccc-------------ccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhh
Confidence 999986432 5899999999864321 1112356778899999999977776555665411 1
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc-----c
Q 004475 575 DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE-----F 649 (751)
Q Consensus 575 ~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~-----~ 649 (751)
..+....++|+.++++++.++..+| +|+|+||||||++|+.++.++|++++++|+.+|+.+........... .
T Consensus 413 ~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 490 (582)
T 3o4h_A 413 GDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIE 490 (582)
T ss_dssp TCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHH
Confidence 2233456799999999999987777 99999999999999999999999999999999987632110000000 0
Q ss_pred ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475 650 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 729 (751)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (751)
...-...+.+...+|..++.++++|+|++||++|.++| +.++++++++|+..+.+++++++|+++|.+...+...+++
T Consensus 491 ~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 568 (582)
T 3o4h_A 491 QLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKIL 568 (582)
T ss_dssp HHTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHH
T ss_pred HHcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHH
Confidence 00013456778889999999999999999999999999 9999999999999999999999999999987666778899
Q ss_pred HHHHHHHHHHhcC
Q 004475 730 WETDRWLQKYCLS 742 (751)
Q Consensus 730 ~~~~~fl~~~l~~ 742 (751)
+.+.+||+++++.
T Consensus 569 ~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 569 LPAVFFLATQRER 581 (582)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999863
No 7
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-50 Score=463.11 Aligned_cols=602 Identities=14% Similarity=0.090 Sum_probs=406.5
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCc--ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe---eeccC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFE 79 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~--~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~---~~lt~ 79 (751)
.+|+++++.+ |+.++++..... ..+..++|||||++|||.+...+..+ ......||++++++|+. ++++
T Consensus 36 ~~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~-~s~~~~i~~~d~~~g~~~~~~~l~- 109 (719)
T 1z68_A 36 NNIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWR-YSYTATYYIYDLSNGEFVRGNELP- 109 (719)
T ss_dssp SCEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSS-SCEEEEEEEEETTTTEECCSSCCC-
T ss_pred CCEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEE-eecceEEEEEECCCCccccceecC-
Confidence 4799999999 998887631111 02789999999999999875211000 02247999999999988 6663
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
. .+..++|||||++|+|... ..|
T Consensus 110 --~-----~~~~~~~SPDG~~la~~~~--------------------------------------------------~~i 132 (719)
T 1z68_A 110 --R-----PIQYLCWSPVGSKLAYVYQ--------------------------------------------------NNI 132 (719)
T ss_dssp --S-----SBCCEEECSSTTCEEEEET--------------------------------------------------TEE
T ss_pred --c-----ccccceECCCCCEEEEEEC--------------------------------------------------CeE
Confidence 2 2567899999999999832 479
Q ss_pred EEEcC-CCCceecCCCc--e-E-----------------EeeeeCCCCceEEEEEecCCcc-------------------
Q 004475 160 VLGSL-DGTAKDFGTPA--V-Y-----------------TAVEPSPDQKYVLITSMHRPYS------------------- 199 (751)
Q Consensus 160 ~~~~~-~G~~~~lt~~~--~-~-----------------~~~~~SpDG~~i~~~~~~~~~~------------------- 199 (751)
+++++ +|+.++++..+ . + ..++|||||++|++.+.+....
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 99999 67777776431 1 1 3799999999999987653210
Q ss_pred -cccc-cCCCceeEEEEeCCCceee---eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCc
Q 004475 200 -YKVP-CARFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSP 274 (751)
Q Consensus 200 -~~~~-~~~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~ 274 (751)
|... ......+|++||+++++.. ++.. |..+......+..++|||||+ +++.... ....
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~SpD~~--~~~~~~~-------~~~~ 276 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV-------PAMIASSDYYFSWLTWVTDER--VCLQWLK-------RVQN 276 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCC-------CHHHHTSCEEEEEEEESSSSE--EEEEEEE-------SSTT
T ss_pred cCCCCCCCCCeeEEEEEECCCCCccceeEccC-------CccCCCCcceEEEeEEeCCCe--EEEEEec-------cccC
Confidence 0000 0011247999999987642 2211 001111223356889999975 3443211 1112
Q ss_pred ccceeecc----CCCCCCCCceEeE----e-ece--e---EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee
Q 004475 275 RDIIYTQP----AEPAEGEKPEILH----K-LDL--R---FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 339 (751)
Q Consensus 275 ~~~l~~~~----~~~~~~~~~~~l~----~-~~~--~---~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (751)
...|++++ ++ ++....+. . ..+ . .. +.|||||+.|++......+..+||+++++++ ..+.
T Consensus 277 ~~~l~~~d~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~ 351 (719)
T 1z68_A 277 VSVLSICDFREDWQ---TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQ 351 (719)
T ss_dssp EEEEEEEEECSSSS---SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEE
T ss_pred eEEEEEEcccCCCC---CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEe
Confidence 24688888 64 33333333 1 111 1 12 7899999999886544455679999999884 4566
Q ss_pred eeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc--eeEEeeccchhh
Q 004475 340 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNREKY 417 (751)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~ 417 (751)
++..... +.. +.++ ||+.|+|.+... .......+||.+++.++. .+.+...-..
T Consensus 352 lt~~~~~-v~~------~~~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~-- 407 (719)
T 1z68_A 352 ITSGKWE-AIN------IFRV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRK-- 407 (719)
T ss_dssp CSCSSSC-EEE------EEEE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTT--
T ss_pred cccCceE-EEE------EEEE-eCCEEEEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCccCC--
Confidence 6643322 111 4456 999999988320 001234578888886663 3444321000
Q ss_pred hhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC----CCCccCCceEEEEEEcCCCce
Q 004475 418 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVP 493 (751)
Q Consensus 418 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~----~~~~~~~~~e~i~~~~~~~~~ 493 (751)
. ......++|||||+++++..+++..| .++++++.+|+..+++..+.. .........+.++++..+ .+
T Consensus 408 --~----~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 479 (719)
T 1z68_A 408 --E----RCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-IT 479 (719)
T ss_dssp --T----TBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EE
T ss_pred --C----CCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eE
Confidence 0 00112358999999999998887765 688999988887777765432 222333457889998777 89
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCCCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 572 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~~g~g~~~ 572 (751)
+.++++.|+++.+. +++|+||++||++.... ....+.......++ ++||+|++++++ |+|.+.
T Consensus 480 l~~~~~~P~~~~~~--~~~p~vl~~hG~~~~~~-----------~~~~~~~~~~~~l~~~~G~~v~~~d~r---G~g~~~ 543 (719)
T 1z68_A 480 LWYKMILPPQFDRS--KKYPLLIQVYGGPCSQS-----------VRSVFAVNWISYLASKEGMVIALVDGR---GTAFQG 543 (719)
T ss_dssp EEEEEEECTTCCSS--SCEEEEEEECCCTTBCC-----------CCCCCCCCHHHHHHHTTCCEEEEEECT---TBSSSC
T ss_pred EEEEEEeCCCCCCC--CCccEEEEECCCCCcCc-----------ccccchhhHHHHHHhcCCeEEEEEcCC---CCCCCc
Confidence 99999999876443 35899999999863211 01111212344454 799999995554 554432
Q ss_pred CC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcc
Q 004475 573 PN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 646 (751)
Q Consensus 573 ~~------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 646 (751)
.. ..+.....+|+.++++++.++..+|+++|+|+||||||++|+.++.++|++++++|+.+|+.++......+.
T Consensus 544 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~ 623 (719)
T 1z68_A 544 DKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYT 623 (719)
T ss_dssp HHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHH
T ss_pred hhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccc
Confidence 11 112245689999999999998778899999999999999999999999999999999999877543211100
Q ss_pred c-ccccc--hhhHHHHHhcCcccccCCCCC-CEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc
Q 004475 647 T-EFRTL--WEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 722 (751)
Q Consensus 647 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 722 (751)
. ....+ +...+.+...++...+.++++ |+|++||++|.++| +.++++++++|+..+++++++++|+++|.+ ..
T Consensus 624 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~ 700 (719)
T 1z68_A 624 ERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SG 700 (719)
T ss_dssp HHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-CT
T ss_pred hhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-Cc
Confidence 0 00111 334556777888888889988 89999999999999 999999999999999999999999999998 35
Q ss_pred ccHHHHHHHHHHHHHHHhc
Q 004475 723 ENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 723 ~~~~~~~~~~~~fl~~~l~ 741 (751)
+....+.+.+.+||.++|+
T Consensus 701 ~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 701 LSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHhhC
Confidence 5577899999999999874
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=4.5e-48 Score=442.91 Aligned_cols=588 Identities=15% Similarity=0.094 Sum_probs=396.6
Q ss_pred ceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc--cccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 35 ~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
.+..+|||++++|++... ......||+++..+++.++|++.... .....+..++|||||++|+|........
T Consensus 72 ~~~p~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~- 145 (695)
T 2bkl_A 72 VSTPSRRNGRFFYVRTHK-----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD- 145 (695)
T ss_dssp ECCCEEETTEEEEEEECT-----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS-
T ss_pred CCCCEEECCEEEEEEEcC-----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc-
Confidence 345569999999988521 12357899999988988888764321 0011367899999999999996532211
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCCce--EEeeeeCCCCceE
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV--YTAVEPSPDQKYV 189 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~~~--~~~~~~SpDG~~i 189 (751)
...|+++|+ +|+..+...... ...++|||||+.|
T Consensus 146 -------------------------------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l 182 (695)
T 2bkl_A 146 -------------------------------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGF 182 (695)
T ss_dssp -------------------------------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEE
T ss_pred -------------------------------------------eEEEEEEECCCCCCcCCcccCcccccceEEecCCCEE
Confidence 158999999 665441111122 2689999999999
Q ss_pred EEEEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
+|.+.+....-.........+||+|++.+++. +.+...+.. ......+.|||||++ |++.+....
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~-l~~~~~~~~-- 249 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKY-LFVYILRGW-- 249 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCC-EEEEEEETT--
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCE-EEEEEeCCC--
Confidence 99887542100000112246799999987753 233332211 112347899999999 666542210
Q ss_pred CccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCC-cceeeeecc-
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRV- 344 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~- 344 (751)
...+||+++.. ++..+.+........ +.| +||+ |++.++.......|++++++++.. ..+.++...
T Consensus 250 ------~~~~l~~~~~~---~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 250 ------SENDVYWKRPG---EKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp ------TEEEEEEECTT---CSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS
T ss_pred ------CceEEEEEcCC---CCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC
Confidence 23588988764 456667766554444 666 8888 888876544567999999987511 124555432
Q ss_pred cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeee
Q 004475 345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 424 (751)
Q Consensus 345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 424 (751)
...+.. ++|+ ++ .|++.... ....+|++++++++..+.+...... .+
T Consensus 319 ~~~l~~------~~~~-~~-~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~v--- 365 (695)
T 2bkl_A 319 SASLLS------VSIV-GG-HLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG----AA--- 365 (695)
T ss_dssp SCEEEE------EEEE-TT-EEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS----EE---
T ss_pred CCeEEE------EEEE-CC-EEEEEEEE------------------CCEEEEEEEeCCCCeeEEecCCCCe----EE---
Confidence 111111 4566 44 45555522 1234788888865444444221110 01
Q ss_pred ecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCCccCCceEEEEEEcCCCceEEEEEEcCCCC
Q 004475 425 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGY 504 (751)
Q Consensus 425 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~~~~~~~i~~~~~~P~~~ 504 (751)
..+++|||++.++++.++...|+.+|++|+.+++.+.++..+.. .+...+..+.+.+++.+|..|.++++.|++.
T Consensus 366 ----~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~ 440 (695)
T 2bkl_A 366 ----SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDL 440 (695)
T ss_dssp ----CCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTC
T ss_pred ----EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCC
Confidence 12478899999999999999999999999999998888765433 2344567899999999999999999999875
Q ss_pred CCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC---CCCchhHHHH
Q 004475 505 DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDRFVEQL 581 (751)
Q Consensus 505 ~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~---~~~~~~~~~~ 581 (751)
... ++.|+||++|||+..... ..| ......|+++||+|+++++++..++|.. ..........
T Consensus 441 ~~~--~~~p~vl~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~ 505 (695)
T 2bkl_A 441 KRD--GNAPTLLYGYGGFNVNME---------ANF----RSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNV 505 (695)
T ss_dssp CCS--SCCCEEEECCCCTTCCCC---------CCC----CGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHH
T ss_pred CCC--CCccEEEEECCCCccccC---------CCc----CHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCc
Confidence 432 358999999997632211 011 1234467889999999776655445432 1112234566
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----cccccccch--h
Q 004475 582 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-----FQTEFRTLW--E 654 (751)
Q Consensus 582 ~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-----~~~~~~~~~--~ 654 (751)
++|+.+++++|.+++.+|++||+|+|+||||++++.++.++|++|+++|+.+|+.+....... +......+. .
T Consensus 506 ~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~ 585 (695)
T 2bkl_A 506 FDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPE 585 (695)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHH
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHH
Confidence 899999999999998899999999999999999999999999999999999999875432110 000001110 1
Q ss_pred hHHHHHhcCcccccCCCC--CCEEEEEcCCCCCCCCChHHHHHHHHHHHh---CCCcEEEEEeCCCCCcCCc-cccHHHH
Q 004475 655 ATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAA-RENVMHV 728 (751)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~--~P~li~~G~~D~~vp~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~-~~~~~~~ 728 (751)
..+.+..++|+.++.+++ +|+||+||++|.+|| +.++++++++|++ .+.+++++++++++|.+.. .....+.
T Consensus 586 ~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 663 (695)
T 2bkl_A 586 DFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIES 663 (695)
T ss_dssp HHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHH
T ss_pred HHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHH
Confidence 223456788998888876 799999999999999 9999999999998 6789999999999999853 2345677
Q ss_pred HHHHHHHHHHHhcCCCCCCCCC
Q 004475 729 IWETDRWLQKYCLSNTSDGKCG 750 (751)
Q Consensus 729 ~~~~~~fl~~~l~~~~~~~~~~ 750 (751)
...+++||.++++.......|.
T Consensus 664 ~~~~~~fl~~~l~~~~~~~~~~ 685 (695)
T 2bkl_A 664 SVDLYSFLFQVLDVQGAQGGVA 685 (695)
T ss_dssp HHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHHHcCCCCCCcchh
Confidence 8889999999998766666664
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=7.5e-48 Score=442.50 Aligned_cols=587 Identities=13% Similarity=0.094 Sum_probs=397.9
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc--cccceeeeeEEecCCcEEEEeecCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
...| +|||++++|++... ......||+++..+++.+.|++.... .....+..++|||||++|+|.+.....
T Consensus 76 ~~~p--~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~ 148 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTG-----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS 148 (710)
T ss_dssp ECCC--EEETTEEEEEEECS-----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCC--EEECCEEEEEEEcC-----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC
Confidence 3445 49999999987521 12346899999888887765432210 001136689999999999999653211
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCce
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~ 188 (751)
. ..+|+++|+ +|+..+++.. ..+..++|||||+.
T Consensus 149 ~--------------------------------------------~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~ 184 (710)
T 2xdw_A 149 D--------------------------------------------WVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKG 184 (710)
T ss_dssp S--------------------------------------------CEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSE
T ss_pred c--------------------------------------------eEEEEEEECCCCCCCcccccCcccceEEEEeCCCE
Confidence 1 148999999 6666554433 33567999999999
Q ss_pred EEEEEecCCcc---cccccCCCceeEEEEeCCCceee--eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEec
Q 004475 189 VLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (751)
Q Consensus 189 i~~~~~~~~~~---~~~~~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~ 263 (751)
|+|.+...... -.........+||++++.+++.+ .+...+.. ......+.|||||++ |++.+..
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----------~~~~~~~~~SpDg~~-l~~~~~~ 253 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRY-VLLSIRE 253 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCE-EEEEEEC
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----------CeEEEEEEEcCCCCE-EEEEEEc
Confidence 99988654310 00001122467999999876532 22222111 111336799999999 6665422
Q ss_pred cCCCCccccCcccceeeccCCCC-----CCCCceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCC-cc
Q 004475 264 DRGDANVEVSPRDIIYTQPAEPA-----EGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-AP 337 (751)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~ 337 (751)
.. ....+||+++++.. .....+.+..........|+|||+.|+|.++.......|++++++++.. ..
T Consensus 254 ~~-------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 326 (710)
T 2xdw_A 254 GC-------DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW 326 (710)
T ss_dssp SS-------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred cC-------CCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 11 11358999998510 0114556655433333468999999999987655567899999987521 23
Q ss_pred eeeeecccc-cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce-eEEeeccch
Q 004475 338 RVLFDRVFE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWESNRE 415 (751)
Q Consensus 338 ~~l~~~~~~-~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~ 415 (751)
+.++..... .+.. ++|++++ .|++.... ....+|+++++.+|+. +.+.....
T Consensus 327 ~~l~~~~~~~~~~~------~~~~~~~-~lv~~~~~------------------~g~~~l~~~~~~~g~~~~~l~~~~~- 380 (710)
T 2xdw_A 327 KVLVPEHEKDVLEW------VACVRSN-FLVLCYLH------------------DVKNTLQLHDLATGALLKIFPLEVG- 380 (710)
T ss_dssp EEEECCCSSCEEEE------EEEETTT-EEEEEEEE------------------TTEEEEEEEETTTCCEEEEECCCSS-
T ss_pred eeccCCCCCCeEEE------EEEEcCC-EEEEEEEE------------------CCEEEEEEEECCCCCEEEecCCCCc-
Confidence 555543221 1111 6677555 45555522 1234789999966653 44432211
Q ss_pred hhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCc--eeEeecCCCCCCCccCCceEEEEEEcCCCce
Q 004475 416 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQRKDGVP 493 (751)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~--~~~lt~~~~~~~~~~~~~~e~i~~~~~~~~~ 493 (751)
.+. .++++||++.++|+.++...|+.+|++|+.+++ .+.+........+...+..+++.+++.+|..
T Consensus 381 ----~v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg~~ 449 (710)
T 2xdw_A 381 ----SVV-------GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTK 449 (710)
T ss_dssp ----EEE-------EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTTSCE
T ss_pred ----eEE-------EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCCCCE
Confidence 111 246889999999999999999999999999988 6666654332123445678999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKL 572 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~ 572 (751)
|+++++.|++.... ++.|+||++||++.... ..........|++ +||+|+++++++..++|...
T Consensus 450 i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~-------------~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~ 514 (710)
T 2xdw_A 450 IPMFIVHKKGIKLD--GSHPAFLYGYGGFNISI-------------TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETW 514 (710)
T ss_dssp EEEEEEEETTCCCS--SCSCEEEECCCCTTCCC-------------CCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHH
T ss_pred EEEEEEecCCCCCC--CCccEEEEEcCCCCCcC-------------CCcccHHHHHHHHhCCcEEEEEccCCCCCCChHH
Confidence 99999999875432 35899999999753211 1111123456777 99999996665544443221
Q ss_pred ---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----
Q 004475 573 ---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG----- 644 (751)
Q Consensus 573 ---~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~----- 644 (751)
.........++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+.......
T Consensus 515 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~ 594 (710)
T 2xdw_A 515 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHA 594 (710)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGG
T ss_pred HHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChh
Confidence 111223456799999999999998899999999999999999999999999999999999998875432110
Q ss_pred ccccccc--chhhHHHHHhcCcccccC-----CCCC-CEEEEEcCCCCCCCCChHHHHHHHHHHHhC-------CCcEEE
Q 004475 645 FQTEFRT--LWEATNVYIEMSPITHAN-----KIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGH-------GALSRL 709 (751)
Q Consensus 645 ~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~-P~li~~G~~D~~vp~~~~~~~~~~~~l~~~-------~~~~~~ 709 (751)
+..+... .....+.+..++|+.++. ++++ |+||+||++|.+|| +.++.+++++|+.. +.++++
T Consensus 595 ~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 672 (710)
T 2xdw_A 595 WTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNNPLLI 672 (710)
T ss_dssp GHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCSCEEE
T ss_pred HHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCcCEEE
Confidence 0000011 112234566788999888 7886 99999999999999 99999999999987 889999
Q ss_pred EEeCCCCCcCCcc-ccHHHHHHHHHHHHHHHhcC
Q 004475 710 VLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 710 ~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~~ 742 (751)
+++++++|++... ....+....+.+||.++++.
T Consensus 673 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 673 HVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999998643 23467888999999999864
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.3e-46 Score=433.75 Aligned_cols=583 Identities=13% Similarity=0.073 Sum_probs=385.2
Q ss_pred ceeecCCCCeEEEEEeecccccccCCceeEEEEEcC---CCCeeeccCCCCc--cccceeeeeEEecCCcEEEEeecCCC
Q 004475 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 35 ~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~---~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
.+..+|||++++|++... ......||+++.. +++.++|++.... .....+..++|||||++|+|.+....
T Consensus 111 ~~~p~pdG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G 185 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSG-----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG 185 (741)
T ss_dssp ECCCEEETTEEEEEEECS-----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT
T ss_pred cCCCEEECCEEEEEEEcC-----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCC
Confidence 345569999999998621 1235899999987 7777776433210 00113668999999999999865321
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCc
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQK 187 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~ 187 (751)
. ...+|+++|+ +|+..+.+.. ..+..++|||| +
T Consensus 186 ~--------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~ 220 (741)
T 1yr2_A 186 S--------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-D 220 (741)
T ss_dssp C--------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-S
T ss_pred C--------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-C
Confidence 1 1158999999 6665544222 22358999999 9
Q ss_pred eEEEEEecCCcc-cccccCCCceeEEEEeCCCcee--eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 188 YVLITSMHRPYS-YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 188 ~i~~~~~~~~~~-~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
.|+|++...+.. -.........+||++++.++.. +.+...+.. ......+.|||||++ |++.....
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~-l~~~~~~~ 289 (741)
T 1yr2_A 221 ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----------PKRGHGASVSSDGRW-VVITSSEG 289 (741)
T ss_dssp EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCE-EEEEEECT
T ss_pred EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----------CeEEEEEEECCCCCE-EEEEEEcc
Confidence 999987654210 0000111245799999977653 233222111 012347899999999 66654221
Q ss_pred CCCCccccCcccceeeccCCCCCCC--C-ceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~--~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
.....+||+++++ ++ . .+.+..........++|||+.|+|.++......+|++++++++....+.++
T Consensus 290 -------~~~~~~l~~~d~~---~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 290 -------TDPVNTVHVARVT---NGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp -------TCSCCEEEEEEEE---TTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred -------CCCcceEEEEECC---CCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 0124589999986 33 4 566665443333225699999999987655567899999887411234454
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhce
Q 004475 342 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 421 (751)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 421 (751)
......... ++|+ +..|++.... ....+|++++++++..+.+...... .+
T Consensus 360 ~~~~~~l~~------~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~v 409 (741)
T 1yr2_A 360 PESKDNLES------VGIA--GNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG----SA 409 (741)
T ss_dssp CCCSSEEEE------EEEE--BTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC----EE
T ss_pred cCCCCeEEE------EEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCceeeccCCCCe----EE
Confidence 332211111 3344 5566666532 1234788889865544444321110 11
Q ss_pred eeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCCccCCceEEEEEEcCCCceEEEEEEcC
Q 004475 422 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLP 501 (751)
Q Consensus 422 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~~~~~~~i~~~~~~P 501 (751)
. .++++||++.|+|+.++...|+.+|++|+.+++.+.+.... ...+...+..+++.+++.+|..|.++++.|
T Consensus 410 ~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p 481 (741)
T 1yr2_A 410 S-------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH-LTFDPADFRVEQVFYPSKDGTKVPMFIVRR 481 (741)
T ss_dssp E-------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC-CSSCGGGEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E-------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC-CCCChhHCEEEEEEEEcCCCCEEEEEEEec
Confidence 1 24788999999999999999999999999998877666532 222344567899999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCC---CCchhH
Q 004475 502 PGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFV 578 (751)
Q Consensus 502 ~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~---~~~~~~ 578 (751)
++. .++.|+||++||++.... ..........|+++||+|+++++++..++|... ......
T Consensus 482 ~~~----~~~~p~vl~~hGg~~~~~-------------~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 482 KDA----KGPLPTLLYGYGGFNVAL-------------TPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp TTC----CSCCCEEEECCCCTTCCC-------------CCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGT
T ss_pred CCC----CCCCcEEEEECCCCCccC-------------CCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcC
Confidence 864 235899999999863221 111123455788999999996666544443221 111222
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----cccccccch
Q 004475 579 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-----FQTEFRTLW 653 (751)
Q Consensus 579 ~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-----~~~~~~~~~ 653 (751)
...++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+....... +..+...+.
T Consensus 545 ~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~ 624 (741)
T 1yr2_A 545 QNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPE 624 (741)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTT
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCC
Confidence 456899999999999998899999999999999999999999999999999999998875431110 000111111
Q ss_pred --hhHHHHHhcCcccccCC-CCC-CEEEEEcCCCCCCCCChHHHHHHHHHHHh---CCCcEEEEEeCCCCCcCCcc-ccH
Q 004475 654 --EATNVYIEMSPITHANK-IKK-PILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-ENV 725 (751)
Q Consensus 654 --~~~~~~~~~~~~~~~~~-~~~-P~li~~G~~D~~vp~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~~-~~~ 725 (751)
...+.+..++|+.++.+ +++ |+||+||++|.+|| +.++.+++++|+. .+.+++++++++++|.+... ...
T Consensus 625 ~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~ 702 (741)
T 1yr2_A 625 KEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQ 702 (741)
T ss_dssp SHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHH
T ss_pred CHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHH
Confidence 12345577899998887 884 99999999999999 9999999999999 88899999999999997543 234
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 004475 726 MHVIWETDRWLQKYCLSNTS 745 (751)
Q Consensus 726 ~~~~~~~~~fl~~~l~~~~~ 745 (751)
.+....+.+||.++++....
T Consensus 703 ~~~~~~~~~fl~~~l~~~~~ 722 (741)
T 1yr2_A 703 IEETADVQAFLAHFTGLTPR 722 (741)
T ss_dssp HHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHcCCCcc
Confidence 57888999999999975443
No 11
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=2.1e-46 Score=427.62 Aligned_cols=582 Identities=12% Similarity=0.069 Sum_probs=393.2
Q ss_pred ceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC--ccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 35 ~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
.+..+++|.+++|..... .....-+|+...++++ +.|.+... ......+..++|||||++|+|........
T Consensus 81 ~~~p~~~g~~~y~~~~~~-----~~~~~~~~r~~~~~~~-~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~- 153 (693)
T 3iuj_A 81 EGAPFREGRYHYFFKNDG-----LQNQNVLWRQQEGKPA-EVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSD- 153 (693)
T ss_dssp ECCCEEETTEEEEEEECS-----SCSSCEEEEECTTSCC-EEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCC-
T ss_pred CCCCEEECCEEEEEEEcC-----CCceeEEEEeCCCCCc-EEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCc-
Confidence 445578999999986521 1223466665544443 33322211 00011366889999999999986532211
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCCce-EEeeeeCCCCceEE
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV-YTAVEPSPDQKYVL 190 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~~~-~~~~~~SpDG~~i~ 190 (751)
...|+++|+ +|+..+.+.... ...++|| ||+.|+
T Consensus 154 -------------------------------------------~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 154 -------------------------------------------WREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFF 189 (693)
T ss_dssp -------------------------------------------EEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEE
T ss_pred -------------------------------------------eEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEE
Confidence 168999999 776555432222 4688999 999999
Q ss_pred EEEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCC-CCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPP-AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~-~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
|.+......-.........+||++++.++.. +.+...+. . ......+.|||||++ |++......
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~----------~~~~~~~~~SpDg~~-l~~~~~~~~-- 256 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ----------HHRYVGATVTEDDRF-LLISAANST-- 256 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG----------CCSEEEEEECTTSCE-EEEEEESSS--
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC----------CeEEEEEEEcCCCCE-EEEEEccCC--
Confidence 9987632100000112246799999976543 34433322 1 011236799999999 666542211
Q ss_pred CccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCC-cceeeeecccc
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRVFE 346 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~~~ 346 (751)
...+||+++++.. ....+.++.......-.|+++|+.|+|.++......+|+.++++++.. ..+.++.....
T Consensus 257 ------~~~~i~~~d~~~~-~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 257 ------SGNRLYVKDLSQE-NAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp ------SCCEEEEEETTST-TCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred ------CCcEEEEEECCCC-CCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 2258999998521 225566665444333238999999999987655567999999987521 12455543322
Q ss_pred cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeec
Q 004475 347 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 426 (751)
Q Consensus 347 ~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 426 (751)
. +.|+++|++|++...+. ....|++++++++..+.+...... .+.
T Consensus 330 ~---------~~~s~~g~~lv~~~~~~------------------g~~~l~~~d~~g~~~~~l~~p~~~----~~~---- 374 (693)
T 3iuj_A 330 V---------LTVHSGSGYLFAEYMVD------------------ATARVEQFDYEGKRVREVALPGLG----SVS---- 374 (693)
T ss_dssp C---------EEEEEETTEEEEEEEET------------------TEEEEEEECTTSCEEEEECCSSSS----EEE----
T ss_pred E---------EEEEEECCEEEEEEEEC------------------CeeEEEEEECCCCeeEEeecCCCc----eEE----
Confidence 1 36999999999888431 234789999987765555322111 111
Q ss_pred CCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCCccCCceEEEEEEcCCCceEEEEEEcCCCCCC
Q 004475 427 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQ 506 (751)
Q Consensus 427 ~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~ 506 (751)
.+++++|++.+++...+...|+.+|++|+.+++.+.|+..+.. .+...+..+++.+++.+|..|+++++.|++...
T Consensus 375 ---~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~ 450 (693)
T 3iuj_A 375 ---GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAP-FKPEDYVSEQRFYQSKDGTRVPLIISYRKGLKL 450 (693)
T ss_dssp ---ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSS-CCGGGEEEEEEEEECTTSCEEEEEEEEESSCCC
T ss_pred ---eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCC-cChhhCeeEEEEEecCCCcEEEEEEEecCCCCC
Confidence 1357889999999999999999999999999998888876543 234456789999999999999999999987543
Q ss_pred CCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCC---CCchhHHHHHH
Q 004475 507 SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQLVS 583 (751)
Q Consensus 507 ~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~~~~ 583 (751)
.++.|+||++|||+... ...........|+++||+|+.+++++..++|... .........++
T Consensus 451 --~~~~P~ll~~hGg~~~~-------------~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 515 (693)
T 3iuj_A 451 --DGSNPTILYGYGGFDVS-------------LTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFD 515 (693)
T ss_dssp --SSCCCEEEECCCCTTCC-------------CCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred --CCCccEEEEECCCCCcC-------------CCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHH
Confidence 23589999999975321 1111223456888999999997776655554321 11222345689
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----cccccccchh--h-
Q 004475 584 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-----FQTEFRTLWE--A- 655 (751)
Q Consensus 584 d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-----~~~~~~~~~~--~- 655 (751)
|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.|....... +..+.+.+.. .
T Consensus 516 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 595 (693)
T 3iuj_A 516 DFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAM 595 (693)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHH
T ss_pred HHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHH
Confidence 9999999999998899999999999999999999999999999999999999885432110 0000111111 1
Q ss_pred HHHHHhcCcccccCC-CCCC-EEEEEcCCCCCCCCChHHHHHHHHHHHhC---CCcEEEEEeCCCCCcCCcc-ccHHHHH
Q 004475 656 TNVYIEMSPITHANK-IKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAAR-ENVMHVI 729 (751)
Q Consensus 656 ~~~~~~~~~~~~~~~-~~~P-~li~~G~~D~~vp~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~-~~~~~~~ 729 (751)
.+.+..++|+.++.+ +++| +||+||++|.+|| +.++.+++++|++. +.+++++++++++|++... ....+..
T Consensus 596 ~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 673 (693)
T 3iuj_A 596 FDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQS 673 (693)
T ss_dssp HHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHH
T ss_pred HHHHHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHH
Confidence 234667899999998 8987 9999999999999 99999999999987 4789999999999998653 4556778
Q ss_pred HHHHHHHHHHhcCC
Q 004475 730 WETDRWLQKYCLSN 743 (751)
Q Consensus 730 ~~~~~fl~~~l~~~ 743 (751)
..+.+||.++++..
T Consensus 674 ~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 674 ADIYAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCC
Confidence 88999999999754
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=6.5e-44 Score=408.92 Aligned_cols=575 Identities=13% Similarity=0.074 Sum_probs=381.1
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEc---CCC--CeeeccCCC----CccccceeeeeEEe-cCCcEEE
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA---ETG--EAKPLFESP----DICLNAVFGSFVWV-NNSTLLI 102 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~---~~g--~~~~lt~~~----~~~~~~~~~~~~ws-pDg~~l~ 102 (751)
...|. |+|.+++|++... ......+++.+. .++ +.+.|.+.. .... ..+..++|| |||++|+
T Consensus 119 ~~~p~--~~g~~~yy~~~~~-----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~-~~~~~~~~S~PDG~~lA 190 (751)
T 2xe4_A 119 MSAPY--VYGKYRYYTREVK-----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF-CDVMEVKPAPPEHDLVA 190 (751)
T ss_dssp ECCCE--EETTEEEEEEECT-----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC-CEEEEEEECTTTTCEEE
T ss_pred CCCCe--EECCEEEEEEECC-----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe-EEEeeeEecCCCCCEEE
Confidence 44454 7999999987521 122456888876 444 444443321 0010 135688999 9999999
Q ss_pred EeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-CceecCCC--ceEE
Q 004475 103 FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP--AVYT 178 (751)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~~--~~~~ 178 (751)
|........ ..+||++|+ +| + .++.. ....
T Consensus 191 y~~~~~G~~--------------------------------------------~~~l~v~dl~~g~~--~l~~~~~~~~~ 224 (751)
T 2xe4_A 191 FSVDMSGNE--------------------------------------------VYTIEFKRISDPSQ--TIADKVSGTNG 224 (751)
T ss_dssp EEEESSSSS--------------------------------------------CEEEEEEETTCTTC--CCCCCEEEECS
T ss_pred EEEeCCCCc--------------------------------------------eEEEEEEECCCCCE--eCCccccCcee
Confidence 996532111 157999999 55 4 23332 2345
Q ss_pred eeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee--eeccCCCCCCCCCccCCccCCCceeeeecCCCce
Q 004475 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (751)
Q Consensus 179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~ 256 (751)
.++|||||+.|+|++.+.. ....+||++++.+++.+ .+...+.. .....+.|||||++
T Consensus 225 ~~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~~~lv~~~~~~-----------~~~~~~~~SpDg~~- 284 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSEDVCLYEEHNP-----------LFSAFMYKAADTNT- 284 (751)
T ss_dssp CCEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGGCEEEEECCCT-----------TCEEEEEECTTSSE-
T ss_pred eEEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchhcEEEEecCCC-----------ceEEEEEECCCCCE-
Confidence 7999999999999876421 11358999999876432 33222111 11225799999999
Q ss_pred EEEEEeccCCCCccccCcccceeeccCCCCCCCCc--eEeEeeceeEEEEEecC---CceEEEeeeec-ccceeEEEecC
Q 004475 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP--EILHKLDLRFSVSWCDD---SLALVNETWYK-TSQTRTWLVCP 330 (751)
Q Consensus 257 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~l~~~~~~~~~~~spd---g~~l~~~~~~~-~~~~~l~~~~~ 330 (751)
|++.... ....+||+++++.. .+.. +.++..... +.|+++ |+.|+|.++.. ....+||.+++
T Consensus 285 l~~~~~~---------~~~~~l~~~d~~~~-~~~~~~~~l~~~~~~--~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 285 LCIGSQS---------PETAEVHLLDLRKG-NAHNTLEIVRPREKG--VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEEEC---------SSCEEEEEEESSSC-TTCCCEEESSCCCTT--CCEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred EEEEecC---------CCCceEEEEECCCC-CCCceeEEeecCCCC--ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence 6665421 12458999998621 1234 445433211 345555 89999998765 45679999998
Q ss_pred CCCCCccee-eeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec-------C
Q 004475 331 GSKDVAPRV-LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI-------N 402 (751)
Q Consensus 331 ~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-------~ 402 (751)
+++ ...+. +....... .. ..++++++.|++..... ....|+++++ +
T Consensus 353 ~~~-~~~~~~li~~~~~~-~l------~~~~~~~~~lv~~~~~~------------------g~~~l~~~dl~~~~~~~~ 406 (751)
T 2xe4_A 353 GQP-SDWSHVLVDHSEDV-FM------ESIAVRSNYLVVAGRRA------------------GLTRIWTMMADSQDGVFK 406 (751)
T ss_dssp TST-TCCCCEEECCCSSE-EE------EEEEECSSEEEEEEEET------------------TEEEEEEEECCTTTSCCC
T ss_pred CCc-ccceeeEECCCCCc-EE------EEEEEECCEEEEEEEeC------------------CEEEEEEEeccccccccc
Confidence 753 23233 43332211 00 23566778888877431 2447888886 5
Q ss_pred CCc-eeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC-CCCccCCc
Q 004475 403 TGS-KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP-YPTLASLQ 480 (751)
Q Consensus 403 ~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~-~~~~~~~~ 480 (751)
+++ .+.|...... ....+.. ...+++|++.++|+.++...|+.+|.+|+.+++.+.|+..+.. ..+...+.
T Consensus 407 ~g~~~~~l~l~~~~----~~~~~~~---~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 479 (751)
T 2xe4_A 407 AGTGLREVVMEEPI----FTVHLVE---SQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYK 479 (751)
T ss_dssp TTTCCEECCCCCSS----CEEEECG---GGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGGEE
T ss_pred CCccceEECCCCce----eEEEecc---CcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccceE
Confidence 565 5555221110 0111100 0001568899999999999999999999999998888876532 22334467
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
.+.+.+++.+|..|.++++.|++..+. +++|+||++|||+..... ..| ......|+++||+|+.+
T Consensus 480 ~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~ 544 (751)
T 2xe4_A 480 VERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMD---------PQF----SIQHLPYCDRGMIFAIA 544 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCC---------CCC----CGGGHHHHTTTCEEEEE
T ss_pred EEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCC---------Ccc----hHHHHHHHhCCcEEEEE
Confidence 899999999999999999999875332 358999999997532110 111 12345788999999997
Q ss_pred CCCCCCCCCCCC----CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 561 PSIPIIGEGDKL----PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 561 ~~~~~~g~g~~~----~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
++++..++|... .........++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.
T Consensus 545 d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~ 624 (751)
T 2xe4_A 545 HIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFV 624 (751)
T ss_dssp CCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred eeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcc
Confidence 776655555421 1112234678999999999999988999999999999999999999999999999999999987
Q ss_pred CCCCC------ccC--cccccccc--hhhHHHHHhcCcccccCCCCCC-EEEEEcCCCCCCCCChHHHHHHHHHHHhCC-
Q 004475 637 NKTLT------PFG--FQTEFRTL--WEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHG- 704 (751)
Q Consensus 637 d~~~~------~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~P-~li~~G~~D~~vp~~~~~~~~~~~~l~~~~- 704 (751)
+.... +.. .......+ -...+.+...+|+.++.++++| +||+||++|.+|| +.++.+++++|+..+
T Consensus 625 d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~~~L~~~~~ 702 (751)
T 2xe4_A 625 DVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWVSKLRECKT 702 (751)
T ss_dssp CHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHHHHHHHHCC
T ss_pred hHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHHHHHHhcCC
Confidence 73211 000 00011111 0112345678999999999997 9999999999999 999999999999874
Q ss_pred --CcEEEEEeCCCCCcCCccc-cHHHHHHHHHHHHHHHhcCC
Q 004475 705 --ALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 705 --~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~~l~~~ 743 (751)
..+.+.++++++|++.... ........+.+||.++++..
T Consensus 703 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~ 744 (751)
T 2xe4_A 703 DNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKST 744 (751)
T ss_dssp SCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCC
Confidence 4567778899999986432 34456678999999998753
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=4.4e-34 Score=318.63 Aligned_cols=509 Identities=11% Similarity=0.062 Sum_probs=326.5
Q ss_pred eEEEEEcC-CCCce--ecCCC--c------eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce--eee
Q 004475 157 AQLVLGSL-DGTAK--DFGTP--A------VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRE 223 (751)
Q Consensus 157 ~~l~~~~~-~G~~~--~lt~~--~------~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~ 223 (751)
..+..+|+ +|+.. .+... . .+..++|- |+..++|.+...+.. .........++++.+.+.. -+.
T Consensus 156 ~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~Gt~~~~~~~ 232 (711)
T 4hvt_A 156 MFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE--ITSSLYPNSLYIWKRGESIEKAKK 232 (711)
T ss_dssp EEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC--BCTTSSBCEEEEEETTSCGGGCEE
T ss_pred eEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCC--cCcCCCCCEEEEEECCCChHHCeE
Confidence 57788888 66321 11200 0 11345887 777777765433321 1122335779999887653 334
Q ss_pred eccCCCCCCCCCccCCccCCCceeeeecCCCce--EEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeE
Q 004475 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPST--LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (751)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~--i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 301 (751)
+...+.... .-...-++|+++. ..+++... .....++|+++++..+ +....|. .+...
T Consensus 233 v~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~~~~-~~~~~l~-~~~~~ 292 (711)
T 4hvt_A 233 LFEVPKEYI-----------YVSAGKLLSDTISSSLIFISANK-------DFYNYDNYILDTKYKN-LKLQKIN-MPSDA 292 (711)
T ss_dssp EEECCTTSC-----------EEEEEESSCTTTCSSEEEEEEES-------SSSCEEEEEEECSSSS-CEEEECC-SCTTC
T ss_pred EeccCCCce-----------EEEEEEecCCCceEEEEEEEEec-------ccCceeEEEEcCCCCC-CcceEee-cCCcc
Confidence 433322110 0134556777752 12322110 1123578888764111 2223331 11112
Q ss_pred EEEEecCCceEEEee-ee-----cccceeEEEecCCCCC------Ccceeee-ecccccccCCCCCCCeeeCCCCCEEEE
Q 004475 302 SVSWCDDSLALVNET-WY-----KTSQTRTWLVCPGSKD------VAPRVLF-DRVFENVYSDPGSPMMTRTSTGTNVIA 368 (751)
Q Consensus 302 ~~~~spdg~~l~~~~-~~-----~~~~~~l~~~~~~~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~spDG~~l~~ 368 (751)
.+.++.+++.+++.. +. .....+|+.+++++.. ...+.+. ......... +.|+.| .|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~--~l~~ 364 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNF------ISTTKD--RVFL 364 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEE------EEECSS--CEEE
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEE------EEEECC--EEEE
Confidence 234566776555442 11 1134578888887631 2233322 222111111 556665 3555
Q ss_pred eeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc--eeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEec
Q 004475 369 KIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES 446 (751)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 446 (751)
...+ .....|+++++.+|+ .+.+...+.. ..... .+.+++++.+++..++
T Consensus 365 ~~~~------------------~~~~~l~~~~~~~g~~~~~~~i~lp~~----~~~~~------~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 365 ATYD------------------NVVAKVVTFTLENEQWTKPVVLKLPYQ----NAIFG------MSSYEEEEEALITIEN 416 (711)
T ss_dssp EEEE------------------TTEEEEEEECEETTEECCCEEECCCST----TCEEE------EECCTTCSCEEEEEEC
T ss_pred EEEE------------------CCEEEEEEEECCCCceEEEeccCCCCC----eEEEE------EeecCcCCEEEEEEec
Confidence 4422 123478888887774 3331221110 01111 2456889999999999
Q ss_pred CCCCCeEEEEEcCCCceeEeecCCCCCCCccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCc
Q 004475 447 KTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSK 526 (751)
Q Consensus 447 ~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~ 526 (751)
...|+.+|++|+. ++.++++..+... +...+..+++.+++.+|.+|+++++.|++..+. +++|+||++|||++...
T Consensus 417 ~~~P~~~~~~d~~-~~~~~l~~~~~~~-~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~--~~~P~vl~~HGG~~~~~ 492 (711)
T 4hvt_A 417 SIVPPTIYLWVKT-HELKIIRKALYSF-DSENYVLEQKEATSFDGVKIPYFLVYKKGIKFD--GKNPTLLEAYGGFQVIN 492 (711)
T ss_dssp SSSCCEEEEECTT-SCEEEEECCSSCC-CGGGEEEEEEEEECTTSCEEEEEEEEETTCCCS--SCCCEEEECCCCTTCCC
T ss_pred CCCCCEEEEEeCC-CcEEEEecCCccc-CcccCeeEEEEEECCCCeEEEEEEEecCCCCCC--CCccEEEEECCCCCCCC
Confidence 9999999999988 8888888765432 334457899999999999999999999875433 35899999999864321
Q ss_pred ccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcE
Q 004475 527 DAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRI 603 (751)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i 603 (751)
. ..+.....+.|+++||+|+.+++++..++|.. ..........++|+.+++++|.+++.+|++||
T Consensus 493 ~------------~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI 560 (711)
T 4hvt_A 493 A------------PYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYL 560 (711)
T ss_dssp C------------CCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGE
T ss_pred C------------CcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccE
Confidence 1 01111222478899999999877766666543 12223345678999999999999999999999
Q ss_pred EEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-----cccccccch--hhHHHHHhcCcccccCCCCC--C
Q 004475 604 AVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-----FQTEFRTLW--EATNVYIEMSPITHANKIKK--P 674 (751)
Q Consensus 604 ~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--P 674 (751)
+|+|+|+||++++.++.++|++|+++|+.+|++|+...... +..+.+.++ ...+.+..++|+.+++++++ |
T Consensus 561 ~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pP 640 (711)
T 4hvt_A 561 GIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPT 640 (711)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCE
T ss_pred EEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCC
Confidence 99999999999999999999999999999999885432110 001111121 13345778899999999886 9
Q ss_pred EEEEEcCCCCCCCCChHHHHHHHHHH-HhCCCcEEEEEeCCCCCcCCcc-ccHHHHHHHHHHHHHHHhcC
Q 004475 675 ILIIHGEVDDKVGLFPMQAERFFDAL-KGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 675 ~li~~G~~D~~vp~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~~ 742 (751)
+||+||++|.+|| +.++.+++++| ++.+.+++++++|+++|++... .........+.+||.++++.
T Consensus 641 vLii~G~~D~~Vp--~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 641 VLITDSVLDQRVH--PWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp EEEEEETTCCSSC--THHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEecCCCCcCC--hHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 9999999999999 99999999999 9999999999999999998543 23456677889999999874
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=1.1e-25 Score=239.08 Aligned_cols=351 Identities=11% Similarity=0.057 Sum_probs=221.4
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcc---cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGA---KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~---~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~ 80 (751)
..++|+-...+ ++.++++..+... ....|+|||||++|||++.. ++..+||++++++++.++++..
T Consensus 10 ~~~~~~~~~~g----~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------~g~~~l~~~d~~~g~~~~lt~~ 78 (388)
T 3pe7_A 10 TFDTYQDASTG----AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF-------DGPWNYYLLDLNTQVATQLTEG 78 (388)
T ss_dssp CCEEEECTTTC----CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTCEEEECCCS
T ss_pred cceEEecCCCC----cceEEecCCcccccchhhcCccCCCCCCEEEEEEcC-------CCCceEEEEeCCCCceEEeeeC
Confidence 34677766666 7788887543221 12349999999999998742 3456899999999999999876
Q ss_pred CCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 81 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
.... +..++|||||++|+|.... ..|+
T Consensus 79 ~~~~----~~~~~~spdg~~l~~~~~~-------------------------------------------------~~l~ 105 (388)
T 3pe7_A 79 RGDN----TFGGFLSPDDDALFYVKDG-------------------------------------------------RNLM 105 (388)
T ss_dssp SCBC----SSSCEECTTSSEEEEEETT-------------------------------------------------TEEE
T ss_pred CCCC----ccceEEcCCCCEEEEEeCC-------------------------------------------------CeEE
Confidence 6532 2356999999999998531 4799
Q ss_pred EEcC-CCCceecCCC--ceEE--eeeeCCCCceEEEEEecCCcccc---------cccCCCceeEEEEeCCCceeeeecc
Q 004475 161 LGSL-DGTAKDFGTP--AVYT--AVEPSPDQKYVLITSMHRPYSYK---------VPCARFSQKVQVWTTDGKLVRELCD 226 (751)
Q Consensus 161 ~~~~-~G~~~~lt~~--~~~~--~~~~SpDG~~i~~~~~~~~~~~~---------~~~~~~~~~l~~~d~~~~~~~~l~~ 226 (751)
++++ +|+.+.+... .... ...++|||+.|+........... .........|+++|+++++.+.+..
T Consensus 106 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 185 (388)
T 3pe7_A 106 RVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ 185 (388)
T ss_dssp EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE
T ss_pred EEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec
Confidence 9999 6666655433 3232 23459999998865432210000 0001123689999999888877754
Q ss_pred CCCCCCCCCccCCccCCCceeeeec-CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec--eeEE-
Q 004475 227 LPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFS- 302 (751)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~- 302 (751)
... .+..+.||| ||++ |+++.... . .....+|++++++ ++..+.++... ..+.
T Consensus 186 ~~~-------------~~~~~~~sp~dg~~-l~~~~~~~-~-----~~~~~~l~~~d~~---~~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 186 ENQ-------------WLGHPIYRPYDDST-VAFCHEGP-H-----DLVDARMWLINED---GTNMRKVKTHAEGESCTH 242 (388)
T ss_dssp ESS-------------CEEEEEEETTEEEE-EEEEECSC-T-----TTSSCSEEEEETT---SCCCEESCCCCTTEEEEE
T ss_pred CCc-------------cccccEECCCCCCE-EEEEEecC-C-----CCCcceEEEEeCC---CCceEEeeeCCCCccccc
Confidence 332 234779999 9999 77765211 0 0123589999986 56666776554 2455
Q ss_pred EEEecCCceEEEeeeeccc-ceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEE
Q 004475 303 VSWCDDSLALVNETWYKTS-QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 381 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~ 381 (751)
+.|||||+.|+|.+..... ...||++++.++ +.+.++......... ......+|||||+.|++...+.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~-------- 311 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETL--ENRQLTSMPACSHLM-SNYDGSLMVGDGSDAPVDVQDD-------- 311 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTC--CEEEEEEECCEEEEE-ECTTSSEEEEEECCC---------------
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCC--ceEEEEcCCCceeee-ecCCCCeEccCCCcceeEeeec--------
Confidence 8999999999998754332 235999999985 445554432200000 0001146999999999876210
Q ss_pred EccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeee----ecCCcceeeccCCCEEEEEEecCCCCCeEEEEE
Q 004475 382 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL----VFGQGEEDINLNQLKILTSKESKTEITQYHILS 457 (751)
Q Consensus 382 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~ 457 (751)
.+.. ......|++||+++++.+++...... ...+ ......++|||||++|+|.... .....||+++
T Consensus 312 ---~~~~-~~~~~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~ 381 (388)
T 3pe7_A 312 ---SGYK-IENDPFLYVFNMKNGTQHRVARHDTS-----WKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLAT 381 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEECCCC-----CCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEE
T ss_pred ---cccc-cCCCCEEEEEeccCCceEEeccccCc-----ccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEE
Confidence 0000 12345899999999988877655321 0000 0012336899999999998644 4567899999
Q ss_pred cCCCc
Q 004475 458 WPLKK 462 (751)
Q Consensus 458 ~~~g~ 462 (751)
+..+.
T Consensus 382 l~~~~ 386 (388)
T 3pe7_A 382 LPESV 386 (388)
T ss_dssp CCGGG
T ss_pred CChhc
Confidence 87643
No 15
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.6e-23 Score=241.22 Aligned_cols=334 Identities=10% Similarity=0.023 Sum_probs=213.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc-ccceeeeeEEecCCcEEEEeecCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
....++|||||++|+. . ...|+++++++|+.+++....... .......++|||||++|+|.+.....
T Consensus 18 ~~~~~~w~~dg~~~~~-----------~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYK-----------Q-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp CCCCEEECSSSEEEEE-----------E-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred cccccEECCCCcEEEE-----------c-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeee
Confidence 3568999999977766 2 368999999999987775554321 11112348999999999998542111
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCce
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~ 188 (751)
+.+.....+|++|+ +|+.++|+.. ..+..++|||||++
T Consensus 86 ----------------------------------------~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~ 125 (740)
T 4a5s_A 86 ----------------------------------------WRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHK 125 (740)
T ss_dssp ----------------------------------------SSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTC
T ss_pred ----------------------------------------EEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCE
Confidence 11113368999999 7788888876 77889999999999
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC----CCCccCCc--cCCCceeeeecCCCceEEEEEe
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IPVCYNSV--REGMRSISWRADKPSTLYWVEA 262 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~~~~~~~--~~~~~~~~~spdG~~~i~~~~~ 262 (751)
|+|.+. .+||++++++++.++|+....... .+.++-.+ -...+.+.|||||++ |++.+.
T Consensus 126 la~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~ 190 (740)
T 4a5s_A 126 LAYVWN--------------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQF 190 (740)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEE
T ss_pred EEEEEC--------------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEE
Confidence 999853 369999999888888765322110 01000000 012346899999999 777654
Q ss_pred ccCCCCcc------------------------ccCcccceeeccCCCCCC---C---CceEeEe------eceeEE-EEE
Q 004475 263 QDRGDANV------------------------EVSPRDIIYTQPAEPAEG---E---KPEILHK------LDLRFS-VSW 305 (751)
Q Consensus 263 ~~~~~~~~------------------------~~~~~~~l~~~~~~~~~~---~---~~~~l~~------~~~~~~-~~~ 305 (751)
.+...... .......|++++++ + + ....+.. ....+. ++|
T Consensus 191 d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w 267 (740)
T 4a5s_A 191 NDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD---SLSSVTNATSIQITAPASMLIGDHYLCDVTW 267 (740)
T ss_dssp ECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT---SCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred cccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC---CCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence 32211100 00112378999986 4 3 3444443 334455 999
Q ss_pred ecCCceEEEeeeecccceeEEEecCCCCCC-----cceeee-ecccccccCCCCCCCeeeCCCCCEEE-EeeeecCCcce
Q 004475 306 CDDSLALVNETWYKTSQTRTWLVCPGSKDV-----APRVLF-DRVFENVYSDPGSPMMTRTSTGTNVI-AKIKKENDEQI 378 (751)
Q Consensus 306 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~~~l~-~~~~~~~~~~~~~~~~~~spDG~~l~-~~~~~~~~~~~ 378 (751)
||||+.+++..++......|++++++++.. ..+.+. ......+.. .....++|||||+.|+ +.+.+
T Consensus 268 spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~-~~~~~p~fspDG~~l~~~~s~~------ 340 (740)
T 4a5s_A 268 ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR-FRPSEPHFTLDGNSFYKIISNE------ 340 (740)
T ss_dssp EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSS-SSCCCCEECTTSSEEEEEEECT------
T ss_pred eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEcc-CcCCCceEcCCCCEEEEEEEcC------
Confidence 999998888776655567899999988520 122232 222111110 0011277999999988 55521
Q ss_pred EEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEec--C-CCCCeEEE
Q 004475 379 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYHI 455 (751)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~-~~~~~l~~ 455 (751)
+ ...+|+++|+++++.++|+..... +... +++|++.|+|.... . .....||.
T Consensus 341 ------~------G~~~l~~~~~~~~~~~~lT~g~~~-----v~~~--------~~~d~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 341 ------E------GYRHICYFQIDKKDCTFITKGTWE-----VIGI--------EALTSDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp ------T------SCEEEEEEETTCSSCEESCCSSSC-----EEEE--------EEECSSEEEEEESCGGGCTTCBEEEE
T ss_pred ------C------CceEEEEEECCCCceEecccCCEE-----EEEE--------EEEeCCEEEEEEecCCCCCceeEEEE
Confidence 1 245899999999988888766432 2222 33568899998754 1 23457999
Q ss_pred EEcCCCcee-Eee
Q 004475 456 LSWPLKKSS-QIT 467 (751)
Q Consensus 456 ~~~~~g~~~-~lt 467 (751)
+++++++.+ +||
T Consensus 396 v~~~g~~~~~~lt 408 (740)
T 4a5s_A 396 IQLIDYTKVTCLS 408 (740)
T ss_dssp EETTEEEEEEESS
T ss_pred EECCCCCcceeec
Confidence 999877654 666
No 16
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.91 E-value=1.2e-22 Score=216.17 Aligned_cols=324 Identities=10% Similarity=0.060 Sum_probs=199.6
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
+..|+|||||++|||+... .+..+||++++++++.++++...... ...+.|||||++|+|.+..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~~~----- 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGDN----TFGGFISTDERAFFYVKNE----- 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCBC----TTTCEECTTSSEEEEEETT-----
T ss_pred eecCcCCCCCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCCc----cccceECCCCCEEEEEEcC-----
Confidence 6789999999999998642 34568999999999999997655421 2247999999999998532
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC--ceEEe----------
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--AVYTA---------- 179 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~--~~~~~---------- 179 (751)
.+||++++ +|+.++++.. .....
T Consensus 102 --------------------------------------------~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 102 --------------------------------------------LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp --------------------------------------------TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred --------------------------------------------CcEEEEECCCCCcEEEEecccccCCCCCEEEeccCC
Confidence 36889998 5566666542 21111
Q ss_pred ---------eeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeee
Q 004475 180 ---------VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (751)
Q Consensus 180 ---------~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 250 (751)
+.|||||+++++.... .......|+++|+++++.+.+.... ..+..+.||
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~--------~~~~~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~s 196 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFY--------HTNPTCRLIKVDIETGELEVIHQDT-------------AWLGHPIYR 196 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHH--------HTCCCEEEEEEETTTCCEEEEEEES-------------SCEEEEEEE
T ss_pred ccccccccccccCCCCcceeeeeec--------cCCCcceEEEEECCCCcEEeeccCC-------------cccccceEC
Confidence 3556666555543210 0012457999999988777665322 123478999
Q ss_pred c-CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee--ceeEE-EEEecCCceEEEeeeecc-cceeE
Q 004475 251 A-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFS-VSWCDDSLALVNETWYKT-SQTRT 325 (751)
Q Consensus 251 p-dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~~~~~-~~~spdg~~l~~~~~~~~-~~~~l 325 (751)
| ||++ |+++.. +.. ......|++++++ ++..+.+... ...+. +.|||||+.|+|.+.... ....|
T Consensus 197 p~dg~~-l~~~~~--~~~----~~~~~~l~~~d~~---~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 197 PFDDST-VGFCHE--GPH----DLVDARMWLVNED---GSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp TTEEEE-EEEEEC--SCS----SSCSCCCEEEETT---SCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CCCCCE-EEEEec--CCC----CCCCceEEEEECC---CCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 9 8888 777642 111 0112579999886 5555555543 23455 899999999999875432 22359
Q ss_pred EEecCCCCCCcceeeeecccccccCCCCCCCeeeCC-CCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCC
Q 004475 326 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 404 (751)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 404 (751)
+++++.++ ..+.+....... +.||| ||+.|++..... . +....++.........|++||++++
T Consensus 267 ~~~d~~~g--~~~~l~~~~~~~---------~~~s~~dg~~l~~~~~~~--p---~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 267 YKANPETL--ENEEVMVMPPCS---------HLMSNFDGSLMVGDGCDA--P---VDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEECTTTC--CEEEEEECCSEE---------EEEECSSSSEEEEEECCC---------------CCCCCCEEEEEETTTT
T ss_pred EEEECCCC--CeEEeeeCCCCC---------CCccCCCCceEEEecCCc--c---eeeccccccccCCCCcEEEEecccC
Confidence 99999874 444554322111 67999 999877754110 0 0000000000123458999999988
Q ss_pred ceeEEeeccchh-hhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475 405 SKERIWESNREK-YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 466 (751)
Q Consensus 405 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l 466 (751)
+.+++....... .+.. ........++|||||+.|+|.... .....||++++.+++.+.+
T Consensus 331 ~~~~l~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 331 SAQKLCKHSTSWDVLDG--DRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp BCCEEEECCCCCCCBTT--BSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCTTCC---
T ss_pred ceEEccCCCCccccccc--cccCCCCCceEccCCCeEEEEecC-CCCceEEEEEEcccccccc
Confidence 877775443200 0000 000012236899999999988654 3467899999988776543
No 17
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=4.7e-22 Score=230.05 Aligned_cols=329 Identities=13% Similarity=0.142 Sum_probs=209.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc--------------------cceeee
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--------------------NAVFGS 91 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~--------------------~~~~~~ 91 (751)
.+..++|||||++|||++..+ .......||++++++|+.++++......- ...+..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d----~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKD----SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCS----SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCceEecCCCEEEEEeccC----CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 477899999999999986421 01224699999999999888875432110 012568
Q ss_pred eEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC---C
Q 004475 92 FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T 167 (751)
Q Consensus 92 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G---~ 167 (751)
++|||||++|+|.+. ..|+++++ +| +
T Consensus 114 ~~~SpDg~~l~~~~~--------------------------------------------------~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG--------------------------------------------------GELYLYDLKQEGKAA 143 (741)
T ss_dssp CEECTTSSEEEEEET--------------------------------------------------TEEEEEESSSCSTTS
T ss_pred eEECCCCCEEEEEeC--------------------------------------------------CcEEEEECCCCCcce
Confidence 899999999999843 37999999 66 6
Q ss_pred ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC---CCCccCC-ccC
Q 004475 168 AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED---IPVCYNS-VRE 242 (751)
Q Consensus 168 ~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~---~~~~~~~-~~~ 242 (751)
.++++.. ..+..++|||||++|++.+.. +|++|++++++.++++....... .+.++.. ...
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~~~--------------~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIRGR--------------NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEETT--------------EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEeCC--------------cEEEEecCCCCEEEeccCCccceeccccceeeeeccc
Confidence 7788776 778899999999999998532 69999999888777654321100 0000000 001
Q ss_pred CCceeeeecCCCceEEEEEeccCCCCc---------------------cccCcccceeeccCCCCCC-CCceEeEe---e
Q 004475 243 GMRSISWRADKPSTLYWVEAQDRGDAN---------------------VEVSPRDIIYTQPAEPAEG-EKPEILHK---L 297 (751)
Q Consensus 243 ~~~~~~~spdG~~~i~~~~~~~~~~~~---------------------~~~~~~~~l~~~~~~~~~~-~~~~~l~~---~ 297 (751)
.+..++|||||++ |++.+........ ........|++++++ + +....+.. .
T Consensus 210 ~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~ 285 (741)
T 2ecf_A 210 RHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA---EQAQTQWIDLGKEQ 285 (741)
T ss_dssp CCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS---TTCCCEEECCCSCS
T ss_pred cccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC---CCCceEEecCCCCc
Confidence 1357899999999 7776532211100 000112378999886 4 45555442 3
Q ss_pred ceeEE-EEEecCCceEEEeeee-cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCC
Q 004475 298 DLRFS-VSWCDDSLALVNETWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 375 (751)
Q Consensus 298 ~~~~~-~~~spdg~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 375 (751)
...+. ++| |||+.|++.... ......|+++++.++ ..+.+.......... ....++|||||+ +++.+..
T Consensus 286 ~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~~~--- 356 (741)
T 2ecf_A 286 DIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSSER--- 356 (741)
T ss_dssp SEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEECT---
T ss_pred ceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEecC---
Confidence 34556 999 999999988743 334578999999885 444554332211000 001278999999 5555521
Q ss_pred cceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCC-CCeEE
Q 004475 376 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE-ITQYH 454 (751)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~~l~ 454 (751)
....+||+++++++ .+.+...+.. +... ..|||||+.|++....... ...||
T Consensus 357 ---------------~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 357 ---------------TGFQHLYRIDSKGK-AAALTHGNWS-----VDEL------LAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp ---------------TSSCEEEEECSSSC-EEESCCSSSC-----EEEE------EEEETTTTEEEEEECSSCTTCBEEE
T ss_pred ---------------CCccEEEEEcCCCC-eeeeeecceE-----EEeE------eEEeCCCCEEEEEEeCCCCceEEEE
Confidence 12358999998765 5555443321 1111 2599999999988654321 34588
Q ss_pred EEEcCCCceeEeec
Q 004475 455 ILSWPLKKSSQITN 468 (751)
Q Consensus 455 ~~~~~~g~~~~lt~ 468 (751)
.++..++..++|+.
T Consensus 410 ~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 410 AVPLQGGQPQRLSK 423 (741)
T ss_dssp EEETTCCCCEECCC
T ss_pred EEEcCCCCeeeccc
Confidence 88876665676664
No 18
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.91 E-value=3.7e-23 Score=208.24 Aligned_cols=238 Identities=15% Similarity=0.124 Sum_probs=169.5
Q ss_pred EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC
Q 004475 485 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 564 (751)
Q Consensus 485 ~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~ 564 (751)
++...++..+.+++..|....+ .++.|+||++||+||..+. .......+..|+++||.|+++ +
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v~~~---d 80 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS------------QRESDPLALAFLAQGYQVLLL---N 80 (276)
T ss_dssp ECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC------------GGGSHHHHHHHHHTTCEEEEE---E
T ss_pred cccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC------------chhhHHHHHHHHHCCCEEEEe---c
Confidence 3445567777766655543211 2458999999998754321 111234567888999999994 4
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCC
Q 004475 565 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 565 ~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~d~~~ 640 (751)
++|+|.+.... ......+|+..++++++++. .+|+++|+|+||||||.+|+.++.+ .+.+++++|+.+|..+...
T Consensus 81 ~~g~g~s~~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~ 159 (276)
T 3hxk_A 81 YTVMNKGTNYN-FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTF 159 (276)
T ss_dssp CCCTTSCCCSC-THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTS
T ss_pred CccCCCcCCCC-cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHh
Confidence 45555543322 33467889999999998864 3788999999999999999999998 6789999999999876332
Q ss_pred CccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC
Q 004475 641 TPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 720 (751)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 720 (751)
. +.......... ..+. ...++...+.++++|+|++||++|.++| +.++..+++.+++.+.+++++++++++|.+.
T Consensus 160 ~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 234 (276)
T 3hxk_A 160 G-WPSDLSHFNFE-IENI-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHGVS 234 (276)
T ss_dssp S-CSSSSSSSCCC-CSCC-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTTCT
T ss_pred h-CCcchhhhhcC-chhh-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCCcc
Confidence 2 11100000000 0111 4456666778889999999999999999 9999999999999999999999999999886
Q ss_pred ccc------------cHHHHHHHHHHHHHHHhcCCCC
Q 004475 721 ARE------------NVMHVIWETDRWLQKYCLSNTS 745 (751)
Q Consensus 721 ~~~------------~~~~~~~~~~~fl~~~l~~~~~ 745 (751)
... ....+++.+.+||+++.+..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 271 (276)
T 3hxk_A 235 LANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLEH 271 (276)
T ss_dssp TCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC-
T ss_pred ccCccccccccccCchHHHHHHHHHHHHHhCcccccc
Confidence 433 2467888999999999875443
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=1.9e-22 Score=215.23 Aligned_cols=283 Identities=16% Similarity=0.160 Sum_probs=197.2
Q ss_pred ceeEEeec--CCCCCCCCcc---cccCCCCcccccceeecC--------------CCCeEEEEEeecccccccCCceeEE
Q 004475 5 TGIGIHRL--LPDDSLGPEK---EVHGYPDGAKINFVSWSP--------------DGKRIAFSVRVDEEDNVSSCKLRVW 65 (751)
Q Consensus 5 ~~~~~~~~--~~~~~~g~~~---~l~~~~~~~~~~~p~~SP--------------DG~~iaf~~~~~~~~~~~~~~~~l~ 65 (751)
..|++||+ .+ |+.. .+.. ....+...++++ .+++|+|++..+ .......|+
T Consensus 93 ~~i~lwd~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~----~~~~~~~i~ 162 (415)
T 2hqs_A 93 VAYQLVDTGGAP----GTVLAQNSYKV--NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN----GGQFPYELR 162 (415)
T ss_dssp EEEEEEECSSST----TCEEEEEEEEE--CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECS----SSSCCEEEE
T ss_pred EEEEEEeCCCCC----CCEEeeeEEEc--ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecC----CCCccceEE
Confidence 36899999 77 7643 1221 111234444443 488999987521 001227999
Q ss_pred EEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCc
Q 004475 66 IADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDE 145 (751)
Q Consensus 66 i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (751)
+++++++..+.++.... .+..++|||||++|++.+.+..
T Consensus 163 i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg~~la~~s~~~~------------------------------------ 201 (415)
T 2hqs_A 163 VSDYDGYNQFVVHRSPQ-----PLMSPAWSPDGSKLAYVTFESG------------------------------------ 201 (415)
T ss_dssp EEETTSCSCEEEEEESS-----CEEEEEECTTSSEEEEEECTTS------------------------------------
T ss_pred EEcCCCCCCEEEeCCCC-----cceeeEEcCCCCEEEEEEecCC------------------------------------
Confidence 99999888888865443 3678999999999999864311
Q ss_pred cchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee
Q 004475 146 YDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (751)
Q Consensus 146 ~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 223 (751)
...|+++|+ +|+.++++.. ..+..++|||||++|+|+..... ...|++||+++++.++
T Consensus 202 ----------~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g----------~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 202 ----------RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG----------SLNLYVMDLASGQIRQ 261 (415)
T ss_dssp ----------SCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTTCCEEE
T ss_pred ----------CcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC----------CceEEEEECCCCCEEe
Confidence 148999999 7777777766 67889999999999998764321 3579999999887776
Q ss_pred eccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-
Q 004475 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS- 302 (751)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~- 302 (751)
++.... .+..++|||||++ |++.+.. ....+||+++++ ++....++.......
T Consensus 262 l~~~~~-------------~~~~~~~spdg~~-l~~~s~~---------~g~~~i~~~d~~---~~~~~~l~~~~~~~~~ 315 (415)
T 2hqs_A 262 VTDGRS-------------NNTEPTWFPDSQN-LAFTSDQ---------AGRPQVYKVNIN---GGAPQRITWEGSQNQD 315 (415)
T ss_dssp CCCCSS-------------CEEEEEECTTSSE-EEEEECT---------TSSCEEEEEETT---SSCCEECCCSSSEEEE
T ss_pred CcCCCC-------------cccceEECCCCCE-EEEEECC---------CCCcEEEEEECC---CCCEEEEecCCCcccC
Confidence 654332 2447899999998 7776521 122479999986 555566655555566
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 382 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 382 (751)
+.|||||++|++..... +...|++++++++ +.+.++... .... ++|||||+.|++.+.+.
T Consensus 316 ~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~--~~~~l~~~~--~~~~------~~~spdg~~l~~~s~~~--------- 375 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNG-GQQHIAKQDLATG--GVQVLSSTF--LDET------PSLAPNGTMVIYSSSQG--------- 375 (415)
T ss_dssp EEECTTSSEEEEEEECS-SCEEEEEEETTTC--CEEECCCSS--SCEE------EEECTTSSEEEEEEEET---------
T ss_pred eEECCCCCEEEEEECcC-CceEEEEEECCCC--CEEEecCCC--CcCC------eEEcCCCCEEEEEEcCC---------
Confidence 99999999999887432 3468999999885 445554432 2222 88999999999988431
Q ss_pred ccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475 383 NGRGFTPEGNIPFLDLFDINTGSKERIWESN 413 (751)
Q Consensus 383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 413 (751)
....|++||++++..++|...+
T Consensus 376 ---------~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 376 ---------MGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp ---------TEEEEEEEETTSCCEEECCCSS
T ss_pred ---------CccEEEEEECCCCcEEEeeCCC
Confidence 2347999999877777765543
No 20
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=2.9e-22 Score=239.87 Aligned_cols=376 Identities=14% Similarity=0.053 Sum_probs=222.8
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..||++++.+ |+.++|+.. ...+..|+|||||++|||++..+. ..+..+||++++++|+.++|+......
T Consensus 33 ~~l~~~~~~g----g~~~~lt~~--~~~v~~~~~SPDG~~la~~s~~~~----~~~~~~i~~~d~~~g~~~~lt~~~~~~ 102 (1045)
T 1k32_A 33 DDLWEHDLKS----GSTRKIVSN--LGVINNARFFPDGRKIAIRVMRGS----SLNTADLYFYNGENGEIKRITYFSGKS 102 (1045)
T ss_dssp TEEEEEETTT----CCEEEEECS--SSEEEEEEECTTSSEEEEEEEEST----TCCEEEEEEEETTTTEEEECCCCCEEE
T ss_pred CcEEEEECCC----CcEEEeeeC--CCcccCeEECCCCCEEEEEEeecc----CCCCCeEEEEECCCCCeEEcccCCCcc
Confidence 4799999999 999999843 335899999999999999875311 134579999999999999998665410
Q ss_pred --ccceeeeeEEecCCcEEEEeecCCCCCCC--CCC--CCCCCCceeecccccc----ccchhhhhccCCccchhhhhhh
Q 004475 85 --LNAVFGSFVWVNNSTLLIFTIPSSRRDPP--KKT--MVPLGPKIQSNEQKNI----IISRMTDNLLKDEYDESLFDYY 154 (751)
Q Consensus 85 --~~~~~~~~~wspDg~~l~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 154 (751)
-...+..++|||||+ |+|.+........ ... +...+........... .+...+.. ....+...|..+
T Consensus 103 ~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~--~~~~~~~~~~~~ 179 (1045)
T 1k32_A 103 TGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIG--RNTFELPHWKGY 179 (1045)
T ss_dssp ETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEE--ESCSCCTTSTTC
T ss_pred cccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEe--ccCCCccccccc
Confidence 000026889999999 7776542211000 000 0000000000000000 00000000 000000111111
Q ss_pred ---eeeEEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475 155 ---TTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (751)
Q Consensus 155 ---~~~~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 230 (751)
....||..+..|+.++++.+ ..+..+.|++| +|+|.+.... ...||.++.+++..++++.....
T Consensus 180 ~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg----------~~~l~~~~~~g~~~~~l~~~~~~ 247 (1045)
T 1k32_A 180 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDG----------FGQIYSTDLDGKDLRKHTSFTDY 247 (1045)
T ss_dssp CSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTS----------SCEEEEEETTSCSCEECCCCCSS
T ss_pred cCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccC----------ceEEEEEeCCCCcceEecCCCCc
Confidence 23567776556666677655 67788999988 6666654321 22455555544444444322110
Q ss_pred C-------CC-------------------CCccCC-----------ccCCCceeeee-cCCCceEEEEEeccCCCCcccc
Q 004475 231 E-------DI-------------------PVCYNS-----------VREGMRSISWR-ADKPSTLYWVEAQDRGDANVEV 272 (751)
Q Consensus 231 ~-------~~-------------------~~~~~~-----------~~~~~~~~~~s-pdG~~~i~~~~~~~~~~~~~~~ 272 (751)
. +. ...+.. ....+..++|| |||++ |++..
T Consensus 248 ~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~-la~~~----------- 315 (1045)
T 1k32_A 248 YPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL-IAFVS----------- 315 (1045)
T ss_dssp CEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC-EEEEE-----------
T ss_pred ceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCE-EEEEE-----------
Confidence 0 00 000000 11135678888 88888 66643
Q ss_pred CcccceeeccCCCCCCCCceEeEeece-eEE-EEEecCCceEEEeeeecccceeEE-EecCCCCCCcceeeeeccccccc
Q 004475 273 SPRDIIYTQPAEPAEGEKPEILHKLDL-RFS-VSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLFDRVFENVY 349 (751)
Q Consensus 273 ~~~~~l~~~~~~~~~~~~~~~l~~~~~-~~~-~~~spdg~~l~~~~~~~~~~~~l~-~~~~~~~~~~~~~l~~~~~~~~~ 349 (751)
++.|++++++ ++....+..... .+. +.|| ||+.|++.+. ..+|| ++++.++ ..+.++ .....+.
T Consensus 316 --~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~-~~~~~~~ 382 (1045)
T 1k32_A 316 --RGQAFIQDVS---GTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFE-ENLGNVF 382 (1045)
T ss_dssp --TTEEEEECTT---SSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECC-CCCCSEE
T ss_pred --cCEEEEEcCC---CCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEec-CCcccee
Confidence 3578888875 444555555555 566 9999 9999999874 46899 9998874 445555 2222222
Q ss_pred CCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCc
Q 004475 350 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 429 (751)
Q Consensus 350 ~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 429 (751)
. ++|||||++|++...+ ..|++||+++|+.+.+..... ....
T Consensus 383 ~------~~~SpDG~~la~~~~~---------------------~~v~~~d~~tg~~~~~~~~~~-----------~~v~ 424 (1045)
T 1k32_A 383 A------MGVDRNGKFAVVANDR---------------------FEIMTVDLETGKPTVIERSRE-----------AMIT 424 (1045)
T ss_dssp E------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSS-----------SCCC
T ss_pred e------eEECCCCCEEEEECCC---------------------CeEEEEECCCCceEEeccCCC-----------CCcc
Confidence 2 8899999999988722 379999999998877763321 1123
Q ss_pred ceeeccCCCEEEEEEecC------CCCCeEEEEEcCCCceeEeec
Q 004475 430 EEDINLNQLKILTSKESK------TEITQYHILSWPLKKSSQITN 468 (751)
Q Consensus 430 ~~~~s~dg~~l~~~~~~~------~~~~~l~~~~~~~g~~~~lt~ 468 (751)
.++|||||++|++..... .....|+++|+.+++..+++.
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 468999999999887643 335689999999888666654
No 21
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=3.2e-23 Score=204.05 Aligned_cols=219 Identities=18% Similarity=0.223 Sum_probs=163.5
Q ss_pred CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475 478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 557 (751)
Q Consensus 478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 557 (751)
.+..+.++++. ++..+.++++.|++. .++.|+||++||.+. ........+..|+++||.|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v 62 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLA 62 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEE
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEE
Confidence 35678888887 788999999999762 245899999999531 1111234566788999999
Q ss_pred EEcCCCCCCCCCCCCCC-ch------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475 558 LAGPSIPIIGEGDKLPN-DR------------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 624 (751)
Q Consensus 558 ~~~~~~~~~g~g~~~~~-~~------------~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~ 624 (751)
++++. +|+|.+... .. ......+|+.++++++.++. +|.++|+++|||+||.+++.++.++|+
T Consensus 63 ~~~d~---~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~ 138 (241)
T 3f67_A 63 IAPEL---YFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ 138 (241)
T ss_dssp EEECT---TTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT
T ss_pred EEecc---cccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC
Confidence 99555 344332111 11 12456899999999999887 788899999999999999999999986
Q ss_pred ceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC
Q 004475 625 LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 704 (751)
Q Consensus 625 ~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~ 704 (751)
+++++++.+........ +...++...+.++++|+|+++|++|..+| +..+..+++.+.+.+
T Consensus 139 -~~~~v~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~ 199 (241)
T 3f67_A 139 -LKAAVAWYGKLVGEKSL----------------NSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAAN 199 (241)
T ss_dssp -CCEEEEESCCCSCCCCS----------------SSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTT
T ss_pred -cceEEEEeccccCCCcc----------------CCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcC
Confidence 77777777653321110 11123444567788999999999999999 999999999999988
Q ss_pred CcEEEEEeCCCCCcCCc-------cccHHHHHHHHHHHHHHH
Q 004475 705 ALSRLVLLPFEHHVYAA-------RENVMHVIWETDRWLQKY 739 (751)
Q Consensus 705 ~~~~~~~~~~~~H~~~~-------~~~~~~~~~~~~~fl~~~ 739 (751)
.+++++++++++|.+.. .+...+.++.+++||+++
T Consensus 200 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 200 ATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp CSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999999999853 223456788899998753
No 22
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=7.4e-22 Score=209.42 Aligned_cols=309 Identities=9% Similarity=0.002 Sum_probs=202.1
Q ss_pred CceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhh
Q 004475 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (751)
Q Consensus 60 ~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (751)
...++|+....+++.++||..........+..++|||||++|+|.+...
T Consensus 9 ~~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------------------------------- 57 (388)
T 3pe7_A 9 LTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD------------------------------- 57 (388)
T ss_dssp CCCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-------------------------------
T ss_pred ccceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC-------------------------------
Confidence 3478888776677789998766432111223489999999999996421
Q ss_pred hccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ce-EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeC
Q 004475 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AV-YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (751)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~-~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (751)
...+||++++ +|+.++++.. .. ...+.|||||++|+|...+ ..|+++|+
T Consensus 58 ---------------g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~ 109 (388)
T 3pe7_A 58 ---------------GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDL 109 (388)
T ss_dssp ---------------SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEET
T ss_pred ---------------CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEEC
Confidence 1158999999 6688888876 33 3368899999999998643 36999999
Q ss_pred CCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccC-CCC---------ccccCcccceeeccCCCC
Q 004475 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR-GDA---------NVEVSPRDIIYTQPAEPA 286 (751)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~-~~~---------~~~~~~~~~l~~~~~~~~ 286 (751)
++++.+.+...+.... ....+.++|||+. ++....... ... .........|++++++
T Consensus 110 ~~g~~~~~~~~~~~~~----------~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-- 176 (388)
T 3pe7_A 110 ATLEENVVYQVPAEWV----------GYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK-- 176 (388)
T ss_dssp TTCCEEEEEECCTTEE----------EEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT--
T ss_pred CCCcceeeeechhhcc----------cccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECC--
Confidence 9988777655432100 0012345899998 444332111 000 0011233689999986
Q ss_pred CCCCceEeEeeceeEE-EEEec-CCceEEEeeeec--ccceeEEEecCCCCCCcceeeeeccc-ccccCCCCCCCeeeCC
Q 004475 287 EGEKPEILHKLDLRFS-VSWCD-DSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSPMMTRTS 361 (751)
Q Consensus 287 ~~~~~~~l~~~~~~~~-~~~sp-dg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~sp 361 (751)
++..+.++.....+. +.||| ||+.|+|..... ....+||+++++++ ..+.++.... ..+.. ++|||
T Consensus 177 -~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~------~~~sp 247 (388)
T 3pe7_A 177 -TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTH------EFWVP 247 (388)
T ss_dssp -TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEE------EEECT
T ss_pred -CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCccccc------ceECC
Confidence 567778877777777 99999 999999988532 12458999999874 4566654331 11112 78999
Q ss_pred CCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEE
Q 004475 362 TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKIL 441 (751)
Q Consensus 362 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 441 (751)
||+.|+|.+... ......|++||+++|+.+.+..... ............|||||+.|+
T Consensus 248 dg~~l~~~~~~~----------------~~~~~~l~~~d~~~g~~~~l~~~~~------~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 248 DGSALVYVSYLK----------------GSPDRFIYSADPETLENRQLTSMPA------CSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp TSSCEEEEEEET----------------TCCCEEEEEECTTTCCEEEEEEECC------EEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEEEEecCC----------------CCCcceEEEEecCCCceEEEEcCCC------ceeeeecCCCCeEccCCCcce
Confidence 999999987431 1112359999999998877765432 111111122357999999999
Q ss_pred EEEec-----CCCCCeEEEEEcCCCceeEeecCCC
Q 004475 442 TSKES-----KTEITQYHILSWPLKKSSQITNFPH 471 (751)
Q Consensus 442 ~~~~~-----~~~~~~l~~~~~~~g~~~~lt~~~~ 471 (751)
+.... ......||++|+.+++.++|+....
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 306 VDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp -----------CCCCEEEEEETTTTEEEEEEECCC
T ss_pred eEeeeccccccCCCCEEEEEeccCCceEEeccccC
Confidence 87542 2446789999999999888887654
No 23
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=5.2e-22 Score=229.01 Aligned_cols=338 Identities=11% Similarity=0.029 Sum_probs=206.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
....++|||||++++. ...+.|+++++++|+.+++....... ...+..++|||||++|+|.+......
T Consensus 18 ~~~~~~~spdg~~~~~-----------~~dg~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-----------EQKGTVRLWNVETNTSTVLIEGKKIE-SLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSSSCBCCC-----------CSSSCEEEBCGGGCCCEEEECTTTTT-TTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred cccccEEcCCCcEEEE-----------eCCCCEEEEECCCCcEEEEecccccc-ccccceEEECCCCCEEEEEecCccce
Confidence 4678999999995533 22348999999999887776543310 01257899999999999986532211
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-c---eEEeeeeCCCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-A---VYTAVEPSPDQ 186 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~---~~~~~~~SpDG 186 (751)
. ......|+++|+ +|+.++++.. . .+..++|||||
T Consensus 86 ~----------------------------------------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 86 Q----------------------------------------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp S----------------------------------------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred e----------------------------------------ecceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 0 001258999999 6677777654 2 26789999999
Q ss_pred ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC----CCCccCCc--cCCCceeeeecCCCceEEEE
Q 004475 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IPVCYNSV--REGMRSISWRADKPSTLYWV 260 (751)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~~~~~~~--~~~~~~~~~spdG~~~i~~~ 260 (751)
++|+|.+. .+|++|++++++.++++....... .+.+...+ ......++|||||++ |++.
T Consensus 126 ~~la~~~~--------------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~ 190 (723)
T 1xfd_A 126 QQLIFIFE--------------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYA 190 (723)
T ss_dssp TCEEEEET--------------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEE
T ss_pred CEEEEEEC--------------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE-EEEE
Confidence 99999864 269999999888777765421100 00000000 012357999999999 7776
Q ss_pred EeccCCCCcc----------------------ccCcccceeeccCCCCCCCC-ceEeEee------ceeEE-EEEecCCc
Q 004475 261 EAQDRGDANV----------------------EVSPRDIIYTQPAEPAEGEK-PEILHKL------DLRFS-VSWCDDSL 310 (751)
Q Consensus 261 ~~~~~~~~~~----------------------~~~~~~~l~~~~~~~~~~~~-~~~l~~~------~~~~~-~~~spdg~ 310 (751)
+..+...... .......|++++++ ++. ...+... ...+. ++|||||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~---~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN---GPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS---SSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC---CCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 5332111000 00112379999986 333 3455432 34556 99999999
Q ss_pred eEEEeeeecccceeEEEecCCCCCCcceeeeecc-cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCC
Q 004475 311 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 389 (751)
Q Consensus 311 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~ 389 (751)
.|++..++......|+++++.++ +.+.+.... ...+.. ....++|||||+.|++.+... ++ .
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~-----------~~--~ 330 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLHR--QNEEPVFSKDGRKFFFIRAIP-----------QG--G 330 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCCC--CCCCCEECTTSCSEEEEEEEC-----------CS--S
T ss_pred EEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEec--cCCCceEcCCCCeEEEEEecc-----------cC--C
Confidence 88777655445578999999885 334443222 111110 001278999999999873221 11 0
Q ss_pred CCCCceeEEEe-cCCCc---eeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCC-CCCeEEEEEcCCC-ce
Q 004475 390 EGNIPFLDLFD-INTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYHILSWPLK-KS 463 (751)
Q Consensus 390 ~~~~~~l~~~d-~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~~l~~~~~~~g-~~ 463 (751)
.....+|+++| ..+++ .+.+...... +.. .++|||||+.|+|...... ....||.+++.++ +.
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~~~------~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 399 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWD-----VTK------ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNR 399 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSC-----EEE------EEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCC
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeE-----EEe------eeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCc
Confidence 11244799999 56666 5555432211 111 1479999999998864421 3456888887664 34
Q ss_pred eEee
Q 004475 464 SQIT 467 (751)
Q Consensus 464 ~~lt 467 (751)
++|+
T Consensus 400 ~~l~ 403 (723)
T 1xfd_A 400 QCLS 403 (723)
T ss_dssp BCSS
T ss_pred ceec
Confidence 4454
No 24
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=1.5e-22 Score=203.91 Aligned_cols=236 Identities=15% Similarity=0.105 Sum_probs=162.8
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCC-CCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~-~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
..+.+++. .++..+.+.+|.|+.... ...++.|+||++|||||..++. . .....+..|+++||.|+
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~--------~----~~~~~~~~l~~~G~~v~ 69 (277)
T 3bxp_A 3 QVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSG--------R----EEAPIATRMMAAGMHTV 69 (277)
T ss_dssp EEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCC--------T----THHHHHHHHHHTTCEEE
T ss_pred ceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCC--------c----cchHHHHHHHHCCCEEE
Confidence 45677774 567789999999973210 1134589999999987543211 1 11245667888999999
Q ss_pred EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC-------------
Q 004475 559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA------------- 622 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~------------- 622 (751)
+++ ++|+|.... ......+|+.++++++.+.. .+|+++|+++||||||.+|+.++.+.
T Consensus 70 ~~d---~~g~g~~~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 143 (277)
T 3bxp_A 70 VLN---YQLIVGDQS---VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDH 143 (277)
T ss_dssp EEE---CCCSTTTCC---CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTT
T ss_pred EEe---cccCCCCCc---cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCccc
Confidence 954 445442211 22355788889999998752 36778999999999999999999985
Q ss_pred -CCceeEEEEccCCCCCCCCccCcccccccch-hhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475 623 -PHLFCCGIARSGSYNKTLTPFGFQTEFRTLW-EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 700 (751)
Q Consensus 623 -p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l 700 (751)
+.+++++|+.+|..+.... +... .... .....+...++...+.++.+|+|++||++|.++| +.++..+++.+
T Consensus 144 ~~~~~~~~v~~~p~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l 217 (277)
T 3bxp_A 144 YQGQHAAIILGYPVIDLTAG---FPTT-SAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQAM 217 (277)
T ss_dssp CCCCCSEEEEESCCCBTTSS---SSSS-HHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHHH
T ss_pred ccCCcCEEEEeCCcccCCCC---CCCc-cccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHHH
Confidence 6789999999998763321 1000 0000 0000122345666677788999999999999999 99999999999
Q ss_pred HhCCCcEEEEEeCCCCCcCCccc--------------cHHHHHHHHHHHHHHHh
Q 004475 701 KGHGALSRLVLLPFEHHVYAARE--------------NVMHVIWETDRWLQKYC 740 (751)
Q Consensus 701 ~~~~~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~~~~fl~~~l 740 (751)
++.+.+++++++++++|.+.... ...++++.+.+||.++.
T Consensus 218 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 218 LQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 99999999999999999765433 24678899999998774
No 25
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.90 E-value=2.7e-22 Score=212.11 Aligned_cols=231 Identities=19% Similarity=0.180 Sum_probs=172.0
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
...+.+.++. +|..+.++++.|.+. ++.|+||++||++.. ... .......|+++||+|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~--------------~~~-~~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLEST--------------KEE-SFQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCC--------------TTT-THHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCcc--------------HHH-HHHHHHHHHhCCCEEE
Confidence 5688898887 888999999999862 458999999986411 111 1234668889999999
Q ss_pred EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475 559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 638 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~ 638 (751)
+++ ++|+|.+........+..+++..++++|.+++.++.++|+|+|||+||++|+.++.+ |++++++|+. |+.+.
T Consensus 184 ~~d---~rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFD---GPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EEC---CTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EEC---CCCCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 944 456655422111222344567889999999888888999999999999999999999 7899999999 88764
Q ss_pred CCCccCccc----------ccccchhhH-HHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH-HhCCCc
Q 004475 639 TLTPFGFQT----------EFRTLWEAT-NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL-KGHGAL 706 (751)
Q Consensus 639 ~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l-~~~~~~ 706 (751)
......+.. ....++... ..+...++...+.++++|+|+++|++|. +| +.+++++++++ +. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~---~ 332 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE---H 332 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---G
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---C
Confidence 322110000 001122222 4456677777888999999999999999 88 89999999888 54 6
Q ss_pred EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 707 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 707 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
++++++++++|.+ ......+...+.+||.++++..
T Consensus 333 ~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 333 LNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSS
T ss_pred cEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCc
Confidence 8999999999976 4456688999999999999754
No 26
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.90 E-value=1.7e-22 Score=200.51 Aligned_cols=207 Identities=13% Similarity=0.096 Sum_probs=142.0
Q ss_pred EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475 482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 561 (751)
Q Consensus 482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~ 561 (751)
+.+++. .+|.+|++++|+|++ ..+.|+||++||+|.. .........+..|+++||+|+++|
T Consensus 32 ~~~~~~-~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~-------------~~~~~~~~~a~~la~~Gy~Vl~~D 92 (259)
T 4ao6_A 32 RGFSLE-VDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTH-------------KKVEYIEQVAKLLVGRGISAMAID 92 (259)
T ss_dssp EEEEEE-ETTEEEEEEEEEESS-----SCCSEEEEEEC---------------------CHHHHHHHHHHHTTEEEEEEC
T ss_pred EEEEEe-eCCeEEEEEEEeCCC-----CCCCCEEEEeCCCccc-------------ccchHHHHHHHHHHHCCCeEEeec
Confidence 345554 689999999999976 3457999999997521 111122345778999999999954
Q ss_pred CCCCCCCCCCCCCc---------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 004475 562 SIPIIGEGDKLPND---------------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 620 (751)
Q Consensus 562 ~~~~~g~g~~~~~~---------------------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~ 620 (751)
.+|+|.+.... ......+.|...++++++.. +|+.+|+++|+|+||.+++.+++
T Consensus 93 ---~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~ 167 (259)
T 4ao6_A 93 ---GPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTA 167 (259)
T ss_dssp ---CCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHH
T ss_pred ---cCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHh
Confidence 45555432110 01223456778888888664 57889999999999999999999
Q ss_pred hCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475 621 HAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 700 (751)
Q Consensus 621 ~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l 700 (751)
..| +++++|+..+...... ..++...+.++++|+|++||++|.+|| +.+++++++++
T Consensus 168 ~~p-ri~Aav~~~~~~~~~~--------------------~~~~~~~a~~i~~P~Li~hG~~D~~vp--~~~~~~l~~al 224 (259)
T 4ao6_A 168 SDK-RIKVALLGLMGVEGVN--------------------GEDLVRLAPQVTCPVRYLLQWDDELVS--LQSGLELFGKL 224 (259)
T ss_dssp HCT-TEEEEEEESCCTTSTT--------------------HHHHHHHGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHC
T ss_pred cCC-ceEEEEEecccccccc--------------------ccchhhhhccCCCCEEEEecCCCCCCC--HHHHHHHHHHh
Confidence 996 4666665544322100 012234567789999999999999999 99999999988
Q ss_pred HhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 701 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 701 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.. .+..++++|+..|.. ...+....+++||+++|+
T Consensus 225 ~~--~~k~l~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 225 GT--KQKTLHVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp CC--SSEEEEEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred CC--CCeEEEEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 53 356899999854433 234677889999999985
No 27
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.89 E-value=7e-22 Score=206.08 Aligned_cols=245 Identities=14% Similarity=0.130 Sum_probs=163.8
Q ss_pred cCCceEEEEEEcCCCceEEEEEEc-CCCCC------------------CCCCCCccEEEEEcCCCCcCcccCCcccCCCC
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN 537 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~-P~~~~------------------~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~ 537 (751)
..+..+.+.+...++ +.+.+|+ |.... ....+++|+||++|||||..++. .
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~--------~ 129 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSA--------S 129 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCT--------T
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCC--------c
Confidence 446788899987777 7888887 86531 11234689999999998643221 1
Q ss_pred ccCCCCchHHHHHHhC-CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChH
Q 004475 538 EFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYG 611 (751)
Q Consensus 538 ~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~----~id~~-~i~l~G~S~G 611 (751)
. ......+..|+.+ ||+|+.++|+...+. .....++|+.++++|++++. .+|++ +|+|+|+|+|
T Consensus 130 ~--~~~~~~~~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 130 S--TIYDSLCRRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp B--HHHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred h--hhHHHHHHHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 1 0012345677775 999999777533221 12456789999999999765 58898 9999999999
Q ss_pred HHHHHHHHHhCCC---ceeEEEEccCCCCCCCCccCcccccccc---hhhHHHH-------------HhcCccc-ccCCC
Q 004475 612 AFMTAHLLAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFRTL---WEATNVY-------------IEMSPIT-HANKI 671 (751)
Q Consensus 612 G~~a~~~a~~~p~---~~~~~v~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~-------------~~~~~~~-~~~~~ 671 (751)
|++|+.++.+.++ .++++|+++|+++..............+ ......+ ...+++. ....+
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987655 7999999999877432111000000000 0000000 0111221 22334
Q ss_pred C----CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc---cccHHHHHHHHHHHHHHHhcCCC
Q 004475 672 K----KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---RENVMHVIWETDRWLQKYCLSNT 744 (751)
Q Consensus 672 ~----~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~fl~~~l~~~~ 744 (751)
+ +|+||+||+.|.+ ...+.+++++|++.|.+++++++++++|.+.. .+...++++.+.+||+++++...
T Consensus 280 ~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp TTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred ccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 4 6899999999976 45568899999999999999999999999863 34566889999999999987644
Q ss_pred C
Q 004475 745 S 745 (751)
Q Consensus 745 ~ 745 (751)
.
T Consensus 356 ~ 356 (365)
T 3ebl_A 356 H 356 (365)
T ss_dssp -
T ss_pred c
Confidence 3
No 28
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.89 E-value=3.1e-21 Score=190.76 Aligned_cols=213 Identities=18% Similarity=0.187 Sum_probs=163.3
Q ss_pred EEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCC
Q 004475 483 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 562 (751)
Q Consensus 483 ~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~ 562 (751)
++.+...++ .+.++++.|.+ .+.|+||++||.|...+. .. ..........|+++||.|++
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~~--------~~--~~~~~~~~~~l~~~G~~v~~--- 84 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGGT--------MN--NQIVYQLFYLFQKRGFTTLR--- 84 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTCC--------TT--SHHHHHHHHHHHHTTCEEEE---
T ss_pred EEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCCC--------cc--chHHHHHHHHHHHCCCEEEE---
Confidence 888888777 89999998854 236999999996421110 00 00112456688899999999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc
Q 004475 563 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 642 (751)
Q Consensus 563 ~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~ 642 (751)
++++|+|.+...........+|+.++++++.++. .+.++|+++|||+||.+|+.++.++|+ ++++|+++|..+...
T Consensus 85 ~d~~g~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-- 160 (249)
T 2i3d_A 85 FNFRSIGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-- 160 (249)
T ss_dssp ECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--
T ss_pred ECCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--
Confidence 4555666654432222233499999999998875 377799999999999999999999988 999999999755211
Q ss_pred cCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCCcCCc
Q 004475 643 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAA 721 (751)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~ 721 (751)
...+.++++|+|+++|++|..+| ...++++++.+.. .+.+++++++++++|.+.
T Consensus 161 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~- 215 (249)
T 2i3d_A 161 ----------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGANHFFN- 215 (249)
T ss_dssp ----------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-
T ss_pred ----------------------hhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCCCcccc-
Confidence 12345678999999999999999 9999999999875 455889999999999985
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCC
Q 004475 722 RENVMHVIWETDRWLQKYCLSNTS 745 (751)
Q Consensus 722 ~~~~~~~~~~~~~fl~~~l~~~~~ 745 (751)
.....+.+.+.+||.+++....+
T Consensus 216 -~~~~~~~~~i~~fl~~~l~~~~~ 238 (249)
T 2i3d_A 216 -GKVDELMGECEDYLDRRLNGELV 238 (249)
T ss_dssp -TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred -cCHHHHHHHHHHHHHHhcCCCCC
Confidence 46778999999999999875443
No 29
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=1.1e-21 Score=209.40 Aligned_cols=248 Identities=14% Similarity=0.079 Sum_probs=180.5
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|+++|+.+ +..+.++.. ...+..++|||||++|||++.. .+...|+++++++|+.++++....
T Consensus 159 ~~i~i~d~~g----~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~-------~~~~~i~~~d~~tg~~~~l~~~~~-- 223 (415)
T 2hqs_A 159 YELRVSDYDG----YNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPR-- 223 (415)
T ss_dssp EEEEEEETTS----CSCEEEEEE--SSCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSS--
T ss_pred ceEEEEcCCC----CCCEEEeCC--CCcceeeEEcCCCCEEEEEEec-------CCCcEEEEEECCCCcEEEeecCCC--
Confidence 6899999988 888887632 2358899999999999998631 234799999999999888875543
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
.+..++|||||+.|+|..... ....||++|+
T Consensus 224 ---~~~~~~~spdg~~la~~~~~~----------------------------------------------g~~~i~~~d~ 254 (415)
T 2hqs_A 224 ---HNGAPAFSPDGSKLAFALSKT----------------------------------------------GSLNLYVMDL 254 (415)
T ss_dssp ---CEEEEEECTTSSEEEEEECTT----------------------------------------------SSCEEEEEET
T ss_pred ---cccCEEEcCCCCEEEEEEecC----------------------------------------------CCceEEEEEC
Confidence 367899999999999874321 1157999999
Q ss_pred -CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccC
Q 004475 165 -DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (751)
Q Consensus 165 -~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (751)
+|+.++++.+ ..+..++|||||++|++.+.... ...||++|+++++.++++... .
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~-------------~ 311 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEG-------------S 311 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSS-------------S
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCC-------------C
Confidence 6788888776 67889999999999999875321 347999999988766553321 1
Q ss_pred CCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeeccc
Q 004475 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTS 321 (751)
Q Consensus 243 ~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~ 321 (751)
.+..++|||||++ |++.+..+ ....|++++++ ++....++... ... ++|||||+.|++.+... .
T Consensus 312 ~~~~~~~spdG~~-l~~~~~~~---------g~~~i~~~d~~---~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~-~ 376 (415)
T 2hqs_A 312 QNQDADVSSDGKF-MVMVSSNG---------GQQHIAKQDLA---TGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQG-M 376 (415)
T ss_dssp EEEEEEECTTSSE-EEEEEECS---------SCEEEEEEETT---TCCEEECCCSS-SCEEEEECTTSSEEEEEEEET-T
T ss_pred cccCeEECCCCCE-EEEEECcC---------CceEEEEEECC---CCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCC-C
Confidence 2447899999998 77755221 23589999986 45555565544 555 99999999999988543 3
Q ss_pred ceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCC
Q 004475 322 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG 363 (751)
Q Consensus 322 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG 363 (751)
...||+++++++ ..+.++.... .+.. ++|||--
T Consensus 377 ~~~l~~~d~~g~--~~~~l~~~~~-~v~~------~~~~~~~ 409 (415)
T 2hqs_A 377 GSVLNLVSTDGR--FKARLPATDG-QVKF------PAWSPYL 409 (415)
T ss_dssp EEEEEEEETTSC--CEEECCCSSS-EEEE------EEECCCC
T ss_pred ccEEEEEECCCC--cEEEeeCCCC-CCcC------Ccccccc
Confidence 458999999873 4455554322 2222 7888854
No 30
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1e-20 Score=191.90 Aligned_cols=261 Identities=12% Similarity=0.041 Sum_probs=184.3
Q ss_pred CcceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCC-CCeeeccCCC
Q 004475 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAKPLFESP 81 (751)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~-g~~~~lt~~~ 81 (751)
....|+++|+.+ ++.+.+... ...+..++|||||++|++.. ...|+++++++ ++.+++....
T Consensus 20 ~~~~i~~~d~~~----~~~~~~~~~--~~~v~~~~~spdg~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRT----RKMRVVWQT--PELFEAPNWSPDGKYLLLNS-----------EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CCEEEEEEETTT----TEEEEEEEE--SSCCEEEEECTTSSEEEEEE-----------TTEEEEEESSSCCSCEECCCTT
T ss_pred cceeEEEEeCCC----CceeeeccC--CcceEeeEECCCCCEEEEEc-----------CCeEEEEeCCCCCCceEecccc
Confidence 346799999988 888877643 33578999999999999953 25899999999 8888886544
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. ..+..++|||||++|++....... ...||.
T Consensus 83 ~~---~~~~~~~~spdg~~l~~~~~~~~~---------------------------------------------~~~l~~ 114 (297)
T 2ojh_A 83 AT---ICNNDHGISPDGALYAISDKVEFG---------------------------------------------KSAIYL 114 (297)
T ss_dssp CC---CBCSCCEECTTSSEEEEEECTTTS---------------------------------------------SCEEEE
T ss_pred cc---ccccceEECCCCCEEEEEEeCCCC---------------------------------------------cceEEE
Confidence 21 135678999999999998532111 158999
Q ss_pred EcC-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCc
Q 004475 162 GSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 162 ~~~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
+++ +++.++++....+..++|||||++|++...... ...||.++.++++.+.+....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~------------ 172 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE------------ 172 (297)
T ss_dssp EETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS------------
T ss_pred EECCCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC------------
Confidence 998 557777776655778899999999998765421 236777778777666553332
Q ss_pred cCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeec
Q 004475 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYK 319 (751)
Q Consensus 241 ~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~ 319 (751)
..+..+.|+|||+. |++.... .....||.++.+ +.....+......+. +.|+|||+.|++.+...
T Consensus 173 -~~~~~~~~s~dg~~-l~~~~~~---------~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 173 -GRNDGPDYSPDGRW-IYFNSSR---------TGQMQIWRVRVD---GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp -SCEEEEEECTTSSE-EEEEECT---------TSSCEEEEEETT---SSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred -CccccceECCCCCE-EEEEecC---------CCCccEEEECCC---CCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 22457899999998 6665421 123477777764 455666666666666 99999999999887542
Q ss_pred c-------cceeEEEecCCCCCCcceeeeec--ccccccCCCCCCCeeeCCCCCEEEEeeee
Q 004475 320 T-------SQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKIKK 372 (751)
Q Consensus 320 ~-------~~~~l~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~spDG~~l~~~~~~ 372 (751)
. ....|+++++.++ +.+.+... ....... ++|+|||+.|++.+.+
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~------~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTMNS------PNWSPDGDEFAYVRYF 292 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTSCS------CCBCTTSSEEEEEEEC
T ss_pred CCCcccccCceEEEEEecCCC--CceeeeccCCCCccccc------ceECCCCCEEEEEEec
Confidence 2 2367999999884 33444331 1112222 7799999999998843
No 31
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.88 E-value=2.8e-21 Score=199.27 Aligned_cols=234 Identities=13% Similarity=0.097 Sum_probs=164.7
Q ss_pred CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeE
Q 004475 478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 556 (751)
Q Consensus 478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~ 556 (751)
.+..+.++++..+| .+.+.+|.|.+. +.|+||++|||||..++. .. ....+..|+. .||+
T Consensus 60 ~~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g~~--------~~----~~~~~~~la~~~g~~ 120 (326)
T 3ga7_A 60 SMTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILGNL--------DT----HDRIMRLLARYTGCT 120 (326)
T ss_dssp CCEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSCCT--------TT----THHHHHHHHHHHCSE
T ss_pred CcceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccCCh--------hh----hHHHHHHHHHHcCCE
Confidence 34568999998888 899999999751 249999999998643221 11 1245566776 7999
Q ss_pred EEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc------ee
Q 004475 557 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------FC 627 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~~------~~ 627 (751)
|++++++... +. ......+|+.++++|+.++. .+|+++|+|+|+|+||++|+.++.+.|+. ++
T Consensus 121 V~~~dyr~~p---~~-----~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 192 (326)
T 3ga7_A 121 VIGIDYSLSP---QA-----RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVI 192 (326)
T ss_dssp EEEECCCCTT---TS-----CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEE
T ss_pred EEEeeCCCCC---CC-----CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCce
Confidence 9997665322 21 12345689999999999863 57899999999999999999999987664 89
Q ss_pred EEEEccCCCCCCCCccCccccc---ccchhhHHHH---------HhcCcc-----cccCCCCCCEEEEEcCCCCCCCCCh
Q 004475 628 CGIARSGSYNKTLTPFGFQTEF---RTLWEATNVY---------IEMSPI-----THANKIKKPILIIHGEVDDKVGLFP 690 (751)
Q Consensus 628 ~~v~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~-----~~~~~~~~P~li~~G~~D~~vp~~~ 690 (751)
++++++|+.+............ .........+ ...++. ..+.+..+|+||+||+.|+++
T Consensus 193 ~~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~---- 268 (326)
T 3ga7_A 193 AILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI---- 268 (326)
T ss_dssp EEEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH----
T ss_pred EEEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH----
Confidence 9999999876432210000000 0000001111 011111 123345679999999999984
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc----cHHHHHHHHHHHHHHHhcC
Q 004475 691 MQAERFFDALKGHGALSRLVLLPFEHHVYAARE----NVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 691 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~~~~~fl~~~l~~ 742 (751)
.++.+++++|++.|.+++++++++++|++.... ...++++.+.+||.+++..
T Consensus 269 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 269 DDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 577889999999999999999999999985433 3478899999999999864
No 32
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=208.68 Aligned_cols=230 Identities=18% Similarity=0.154 Sum_probs=160.3
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
++.+.+. + ..+.++++.|++ .++.|+||++||++.. .....+..|+++||+|+++
T Consensus 135 v~~~~~~--~-~~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a~ 189 (422)
T 3k2i_A 135 VWRQSVR--A-GRVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLAL 189 (422)
T ss_dssp CEEEEEE--E-TTEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEEE
T ss_pred cEEEEEe--C-CcEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEEE
Confidence 3444443 2 368999999976 3468999999997421 1124467889999999995
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004475 561 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 561 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~ 640 (751)
++ +|+|....... ....+|+.+++++|.++..++..+|+|+||||||.+|+.++.++|+ ++++|+++|......
T Consensus 190 D~---rG~g~~~~~~~--~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~ 263 (422)
T 3k2i_A 190 AY---YNFEDLPNNMD--NISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGN 263 (422)
T ss_dssp EC---SSSTTSCSSCS--CEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCS
T ss_pred cc---CCCCCCCCCcc--cCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccC
Confidence 55 45554432211 1226788899999999888888999999999999999999999987 899999888753221
Q ss_pred CccCccccc---------------------ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHH-HHHHH
Q 004475 641 TPFGFQTEF---------------------RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA-ERFFD 698 (751)
Q Consensus 641 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~-~~~~~ 698 (751)
..+.+.... ...+..............+.++++|+|++||++|.++| .... +.+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~~ 341 (422)
T 3k2i_A 264 TAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVSE 341 (422)
T ss_dssp SCEEETTEEECCCCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHHH
T ss_pred CchhhcCCcCCCcccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHHH
Confidence 111100000 00001111111122233467789999999999999998 7755 68889
Q ss_pred HHHhCCCc-EEEEEeCCCCCcCCc---------------------------cccHHHHHHHHHHHHHHHhcCC
Q 004475 699 ALKGHGAL-SRLVLLPFEHHVYAA---------------------------RENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 699 ~l~~~~~~-~~~~~~~~~~H~~~~---------------------------~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
.|++.+.+ ++++++|+++|.+.. .+...+.++.+++||+++++..
T Consensus 342 ~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 342 RLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp HHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99998888 999999999999722 1345678899999999999754
No 33
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.4e-21 Score=223.08 Aligned_cols=330 Identities=11% Similarity=0.030 Sum_probs=198.6
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
...++|||||+ +++. .....||++++++|+.++++...... ...+..++|||||++|+|.+.....
T Consensus 18 ~~~~~~s~dg~-~~~~----------~~d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~~~-- 83 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQ----------SADNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYSKL-- 83 (719)
T ss_dssp CCCCEESSSSE-EEEE----------CTTSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEEEC--
T ss_pred CCccEECCCCe-EEEE----------cCCCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCcee--
Confidence 35789999995 4443 23468999999999998887543210 0015688999999999998542100
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecCCCceEEeeeeCCCCce
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTPAVYTAVEPSPDQKY 188 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt~~~~~~~~~~SpDG~~ 188 (751)
|.+.....|+++|+ +|+. ++++ ..+..++|||||++
T Consensus 84 --------------------------------------~~~s~~~~i~~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 84 --------------------------------------WRYSYTATYYIYDLSNGEFVRGNELP--RPIQYLCWSPVGSK 123 (719)
T ss_dssp --------------------------------------SSSCEEEEEEEEETTTTEECCSSCCC--SSBCCEEECSSTTC
T ss_pred --------------------------------------EEeecceEEEEEECCCCccccceecC--cccccceECCCCCE
Confidence 00002268999999 6666 5554 35678999999999
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC----CCCCccCCc--cCCCceeeeecCCCceEEEEEe
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE----DIPVCYNSV--REGMRSISWRADKPSTLYWVEA 262 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~~~~--~~~~~~~~~spdG~~~i~~~~~ 262 (751)
|+|... .+|++|++.+++.++++...... +.+.++..+ ......++|||||++ |++.+.
T Consensus 124 la~~~~--------------~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~ 188 (719)
T 1z68_A 124 LAYVYQ--------------NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEF 188 (719)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEE
T ss_pred EEEEEC--------------CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE-EEEEEE
Confidence 999842 26999999988777765332111 000000000 011247899999999 777654
Q ss_pred ccCCCCcc----------------------ccCcccceeeccCCCCCCCCc---eEeE------eeceeEE-EEEecCCc
Q 004475 263 QDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKP---EILH------KLDLRFS-VSWCDDSL 310 (751)
Q Consensus 263 ~~~~~~~~----------------------~~~~~~~l~~~~~~~~~~~~~---~~l~------~~~~~~~-~~~spdg~ 310 (751)
.+...... .......|++++++ ++.. ..+. .....+. ++|||||+
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT---YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS---CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC---CCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 32211100 00122378888885 3322 1221 2344456 99999977
Q ss_pred eEEEeeeecccceeEEEec----CCCCCCcceeeee----cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475 311 ALVNETWYKTSQTRTWLVC----PGSKDVAPRVLFD----RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 382 (751)
Q Consensus 311 ~l~~~~~~~~~~~~l~~~~----~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 382 (751)
.++...++......||+++ +.++ +.+.++. .....+... ....++|||||+.|++.....
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~--------- 333 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTGWAGGF-FVSTPVFSYDAISYYKIFSDK--------- 333 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSSCSSSS-SCCCCEECTTSSCEEEEEECT---------
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCceEccc-cCCccEECCCCCeEEEEEEcc---------
Confidence 5544333334446899999 7764 3344442 221111100 001277999999988865221
Q ss_pred ccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEec--C-CCCCeEEEEEcC
Q 004475 383 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYHILSWP 459 (751)
Q Consensus 383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~-~~~~~l~~~~~~ 459 (751)
....+|+++|+.+++.+.++..... +.. +.++ |++.|+|.... . .....||.++++
T Consensus 334 --------~g~~~l~~~~~~~~~~~~lt~~~~~-----v~~-------~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 334 --------DGYKHIHYIKDTVENAIQITSGKWE-----AIN-------IFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp --------TSCEEEEEESSCSTTCEECSCSSSC-----EEE-------EEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred --------CCceEEEEEECCCCceEecccCceE-----EEE-------EEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 1234799999988887766543321 221 2455 89999998754 1 234579999987
Q ss_pred CC--ceeEee
Q 004475 460 LK--KSSQIT 467 (751)
Q Consensus 460 ~g--~~~~lt 467 (751)
++ +.+.|+
T Consensus 393 ~g~~~~~~l~ 402 (719)
T 1z68_A 393 SYPPSKKCVT 402 (719)
T ss_dssp SSSCCEEESS
T ss_pred CCCCCceecc
Confidence 66 345555
No 34
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.7e-21 Score=209.11 Aligned_cols=221 Identities=14% Similarity=0.169 Sum_probs=154.8
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 572 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~ 572 (751)
.+.+++|.|++ .++.|+||++||++.. .....+..|+++||+|++++++ |++...
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-----------------~~~~~a~~La~~Gy~Vla~D~r---G~~~~~ 214 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-----------------LLEYRASLLAGKGFAVMALAYY---NYEDLP 214 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS-----------------CCCHHHHHHHTTTCEEEEECCS---SSTTSC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc-----------------hhhHHHHHHHhCCCEEEEeccC---CCCCCC
Confidence 69999999975 3468999999997421 1123467889999999995554 554433
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc----
Q 004475 573 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE---- 648 (751)
Q Consensus 573 ~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~---- 648 (751)
..... ...+|+.++++++.++..+|.++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 215 ~~~~~--~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 215 KTMET--LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp SCCSE--EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred cchhh--CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 22111 126788899999999988899999999999999999999999987 89999998865322111100000
Q ss_pred -----------------cccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHH-HHHHHHHHHhCCCc-EEE
Q 004475 649 -----------------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGAL-SRL 709 (751)
Q Consensus 649 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~-~~~~~~~l~~~~~~-~~~ 709 (751)
....+..............+.++++|+|++||++|.++| ... +..+.+.|++.+.+ +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 369 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEACKRLQAHGRRKPQI 369 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHHHHHHHcCCCCcEE
Confidence 000000000001111222366788999999999999998 744 47899999998888 899
Q ss_pred EEeCCCCCcCC---------------------------ccccHHHHHHHHHHHHHHHhcCC
Q 004475 710 VLLPFEHHVYA---------------------------ARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 710 ~~~~~~~H~~~---------------------------~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
++||+++|.+. ......+.++.+++||+++|+..
T Consensus 370 ~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 370 ICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp EEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999983 11225678899999999999753
No 35
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=1.3e-21 Score=203.77 Aligned_cols=226 Identities=15% Similarity=0.151 Sum_probs=164.0
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
..+..+.+.+...+|..+.++++.|.+ .++.|+||++||+|... ..+ .....++++||+
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~-----------~~~-----~~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNS-----------GDW-----NDKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCS-----------CCS-----GGGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCC-----------CCh-----hhhhHHHhCCcE
Confidence 446788999999899999999999976 34589999999986321 111 122366899999
Q ss_pred EEEcCCCCCCCCCCCCC----------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 004475 557 VLAGPSIPIIGEGDKLP----------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 614 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~----------------------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~ 614 (751)
|+++++ +|+|.+.. ...+....++|+.++++++..+..+|.++|+++|||+||.+
T Consensus 137 v~~~D~---rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~l 213 (346)
T 3fcy_A 137 VVAMDV---RGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGL 213 (346)
T ss_dssp EEEECC---TTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHH
T ss_pred EEEEcC---CCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHH
Confidence 999555 45544321 12235567899999999999988888899999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccch------------------hhHHHHHhcCcccccCCCCCCEE
Q 004475 615 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLW------------------EATNVYIEMSPITHANKIKKPIL 676 (751)
Q Consensus 615 a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~P~l 676 (751)
|+.++.++|+ ++++|+.+|........+.... ....+ .....+...++...+.++++|+|
T Consensus 214 a~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~l 291 (346)
T 3fcy_A 214 SLACAALEPR-VRKVVSEYPFLSDYKRVWDLDL-AKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVL 291 (346)
T ss_dssp HHHHHHHSTT-CCEEEEESCSSCCHHHHHHTTC-CCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEE
T ss_pred HHHHHHhCcc-ccEEEECCCcccCHHHHhhccc-cccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEE
Confidence 9999999987 9999999987542110000000 00000 01112223344556788899999
Q ss_pred EEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 677 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 677 i~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+++|+.|.++| +..+.++++++.. +++++++|+++|.+. .++.+.+.+||.+
T Consensus 292 ii~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 292 MCVGLMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLE 343 (346)
T ss_dssp EEEETTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHT
T ss_pred EEeeCCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHH
Confidence 99999999998 8888777766543 789999999999986 3567888999975
No 36
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.87 E-value=1.3e-21 Score=198.46 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=168.4
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
+..+.+.++. ++..+.++++.|. +.|+||++||++. . ......+...|+++||.|+
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~-----------~----~~~~~~~~~~l~~~g~~v~ 59 (290)
T 3ksr_A 4 AKLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGG-----------S----QHHSLVRAREAVGLGCICM 59 (290)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTC-----------C----TTTTHHHHHHHHTTTCEEE
T ss_pred CceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCC-----------C----cCcHHHHHHHHHHCCCEEE
Confidence 3467778875 7789999999986 2799999999741 1 1112345668888999999
Q ss_pred EcCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 559 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
+ ++++|+|.+... ........+|+.++++++.++..+|.++|+++||||||.+++.++.++| ++++++.+|..
T Consensus 60 ~---~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~ 134 (290)
T 3ksr_A 60 T---FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPAL 134 (290)
T ss_dssp C---CCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCC
T ss_pred E---eecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcch
Confidence 9 555566655332 2245677899999999999887788889999999999999999999987 77888888765
Q ss_pred CCCCCccCcccccccchhhHHHH-------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEE
Q 004475 637 NKTLTPFGFQTEFRTLWEATNVY-------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 709 (751)
Q Consensus 637 d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~ 709 (751)
.... .+...............+ ........+.++++|+|++||+.|..+| ...+..+++.++..+ ++++
T Consensus 135 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~ 210 (290)
T 3ksr_A 135 YKDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTS 210 (290)
T ss_dssp CCSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEE
T ss_pred hhhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceE
Confidence 4221 111111000000001111 1112233456688999999999999999 999999999987765 7899
Q ss_pred EEeCCCCCcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 710 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 710 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+++++++|.+........+.+.+.+||.+++..
T Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 211 RVIAGADHALSVKEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp EEETTCCTTCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCCCCCcchHHHHHHHHHHHHHHHHhcC
Confidence 999999999875556778899999999998864
No 37
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.87 E-value=7.2e-21 Score=188.37 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=158.1
Q ss_pred EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC
Q 004475 484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 563 (751)
Q Consensus 484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~ 563 (751)
+++. .+|..+.++++.|++. .++.|+||++||.+.. ........+...|+++||.|++ +
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~---~ 62 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLR---A 62 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC----CSSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEE---E
T ss_pred eEEe-cCCcEEEEEEEccCCC----CCCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEE---e
Confidence 4454 4788999999998641 1247999999996411 0001112345577889999999 6
Q ss_pred CCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-
Q 004475 564 PIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 640 (751)
Q Consensus 564 ~~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~- 640 (751)
+.+|+|.+.... .......+|+.++++++.+...+ ++++++||||||.+|+.+|.++|++++++|+.+|......
T Consensus 63 D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp CCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 667888765432 23456788999999999765433 4899999999999999999999999999999998643100
Q ss_pred -----------CccCcccccccchh-------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh
Q 004475 641 -----------TPFGFQTEFRTLWE-------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 702 (751)
Q Consensus 641 -----------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~ 702 (751)
.......... .+. .............+.++++|+|++||++|..+| +..++++.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~-- 215 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELD-AWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQY-- 215 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEE-ETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHS--
T ss_pred HhhhhhccccCCchhcchHHh-hhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhC--
Confidence 0000000000 000 001111223334456789999999999999999 88888887665
Q ss_pred CCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 703 HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 703 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.+++++++++++|.+ .+....+.+.+.+||++++.
T Consensus 216 --~~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 216 --KNCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --SSEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred --CCcEEEEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 357999999999998 67788899999999998875
No 38
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.87 E-value=4.5e-22 Score=201.00 Aligned_cols=239 Identities=17% Similarity=0.099 Sum_probs=164.7
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCC-CCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 555 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~-~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 555 (751)
.....+.+.+...++..+...+| |+... ....++.|+||++||+||..++. .. ....+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~--------~~----~~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPV--------AQ----AESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCH--------HH----HHHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCc--------cc----cHHHHHHHHhCCc
Confidence 33556778888888888888888 65421 00124589999999987532210 11 1234567788999
Q ss_pred EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc-------
Q 004475 556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------- 625 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~~------- 625 (751)
.|+++++ +|.+.+. . ......+|+..+++++.+.. .+|+++|+++||||||.+|+.++.++|++
T Consensus 82 ~v~~~d~---~g~~~~~--~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEY---TLLTDQQ--P-LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEEC---CCTTTCS--S-CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEec---cCCCccc--c-CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 9999554 4554431 0 11345678889999998753 36778999999999999999999999877
Q ss_pred ------eeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHH
Q 004475 626 ------FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 699 (751)
Q Consensus 626 ------~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~ 699 (751)
++++|+.+|..+.... +.............+...++...+.++++|+|++||++|.++| +.++..+++.
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~~ 230 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLG---FPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYATA 230 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSB---C--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHHH
T ss_pred CcCCCCccEEEEcCCccccccc---cccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHHH
Confidence 8999999998763211 0000000000000123345566677889999999999999999 8999999999
Q ss_pred HHhCCCcEEEEEeCCCCCcCCccc------------cHHHHHHHHHHHHHHH
Q 004475 700 LKGHGALSRLVLLPFEHHVYAARE------------NVMHVIWETDRWLQKY 739 (751)
Q Consensus 700 l~~~~~~~~~~~~~~~~H~~~~~~------------~~~~~~~~~~~fl~~~ 739 (751)
+...+.+++++++++++|.+.... ...++++.+.+||+++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999775332 1256788899999764
No 39
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.87 E-value=2.1e-21 Score=199.37 Aligned_cols=221 Identities=17% Similarity=0.082 Sum_probs=153.9
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK 571 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~ 571 (751)
.+.+++|.|.+ .++.|+||++|||||..++. ..+ ...+..++. .||+|++++++ +.++.
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~~--------~~~----~~~~~~la~~~g~~vv~~dyr---~~p~~ 125 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVMGSI--------NTH----RSMVGEISRASQAAALLLDYR---LAPEH 125 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTSCCH--------HHH----HHHHHHHHHHHTSEEEEECCC---CTTTS
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCccccCCh--------HHH----HHHHHHHHHhcCCEEEEEeCC---CCCCC
Confidence 48999999975 23589999999998643221 111 133455565 69999996665 32221
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEccCCCCCCCCccCccc
Q 004475 572 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQT 647 (751)
Q Consensus 572 ~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~d~~~~~~~~~~ 647 (751)
.....++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.++. ++++|+++|..+.......+..
T Consensus 126 -----~~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 126 -----PFPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp -----CTTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 1234578999999999988 67899999999999999999999887654 8999999998875432111100
Q ss_pred ccc-cch------h-hHHHHH--------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEE
Q 004475 648 EFR-TLW------E-ATNVYI--------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 711 (751)
Q Consensus 648 ~~~-~~~------~-~~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~ 711 (751)
... .++ . ....|. ..+|+...-...+|+||+||+.|.+ ..++..++++|++.|.++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~~~~~l~~~g~~~~~~~ 275 (322)
T 3fak_A 200 RAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIKLDAKAKADGVKSTLEI 275 (322)
T ss_dssp TTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHHHHHHHHHcCCCEEEEE
Confidence 000 000 0 001111 1223322112236999999999987 4678899999999999999999
Q ss_pred eCCCCCcCCc----cccHHHHHHHHHHHHHHHhcCC
Q 004475 712 LPFEHHVYAA----RENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 712 ~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
+|+++|.+.. .+...++++.+.+||.+++...
T Consensus 276 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 276 WDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred eCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998754 2335788999999999998753
No 40
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.87 E-value=7.2e-21 Score=182.45 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=150.0
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
..+.+.+...+| .+.++++.|.+ .++.|+||++||+|+..+.. . ......+...|+++||.|++
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~--------~--~~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGTM--------N--NKVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCCT--------T--CHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCcc--------C--CchHHHHHHHHHHCCCEEEE
Confidence 456788888888 99999999875 23479999999964221110 0 00112456678889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC
Q 004475 560 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 639 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~ 639 (751)
.+.+|+|.+...........+|+.++++++.++ .+.++|+++|||+||.+|+.++ .+| +++++|+++|..+..
T Consensus 69 ---~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~ 141 (208)
T 3trd_A 69 ---FNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE 141 (208)
T ss_dssp ---ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG
T ss_pred ---EecCCCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC
Confidence 555677766544233355688999999999887 3458999999999999999999 666 899999999875210
Q ss_pred CCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475 640 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 719 (751)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 719 (751)
....+..+++|+|+++|++|..+| +..++++++.+.. .++++++++++|.+
T Consensus 142 ------------------------~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~H~~ 192 (208)
T 3trd_A 142 ------------------------GFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISS---PVEFVVMSGASHFF 192 (208)
T ss_dssp ------------------------GGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSS---CCEEEEETTCCSSC
T ss_pred ------------------------CchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccC---ceEEEEeCCCCCcc
Confidence 012244568999999999999999 8888888776643 37999999999998
Q ss_pred CccccHHHHHHHHHHHH
Q 004475 720 AARENVMHVIWETDRWL 736 (751)
Q Consensus 720 ~~~~~~~~~~~~~~~fl 736 (751)
.. ...++.+.+.+||
T Consensus 193 ~~--~~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HG--RLIELRELLVRNL 207 (208)
T ss_dssp TT--CHHHHHHHHHHHH
T ss_pred cc--cHHHHHHHHHHHh
Confidence 63 2366777777776
No 41
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.87 E-value=3.3e-21 Score=186.96 Aligned_cols=208 Identities=18% Similarity=0.192 Sum_probs=158.6
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
+..+.+.++. ++.++.++++.|.+ +.|+||++||.+... ..+ ........|+++||.|+
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~-----------~~~--~~~~~~~~l~~~G~~v~ 68 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR-----------YSP--RNRYVAEVLQQAGLATL 68 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT-----------TCH--HHHHHHHHHHHHTCEEE
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC-----------Ccc--chHHHHHHHHHCCCEEE
Confidence 5678888885 88899999999875 379999999974211 111 01235567788999999
Q ss_pred EcCCCCCCCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEc
Q 004475 559 AGPSIPIIGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 632 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 632 (751)
+++ .+|+|.+... ........+|+.++++++..+..+|..+++++|||+||.+++.++..+|++++++|+.
T Consensus 69 ~~d---~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~ 145 (223)
T 2o2g_A 69 LID---LLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145 (223)
T ss_dssp EEC---SSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred EEc---CCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEe
Confidence 944 4555543211 1234566889999999999988889999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEe
Q 004475 633 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 712 (751)
Q Consensus 633 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~ 712 (751)
+|..+.. ...+.++++|+|+++|++|..+| ... .+.+.+.+.+++++++
T Consensus 146 ~~~~~~~-------------------------~~~~~~~~~P~l~i~g~~D~~~~--~~~----~~~~~~~~~~~~~~~~ 194 (223)
T 2o2g_A 146 GGRPDLA-------------------------PSALPHVKAPTLLIVGGYDLPVI--AMN----EDALEQLQTSKRLVII 194 (223)
T ss_dssp SCCGGGC-------------------------TTTGGGCCSCEEEEEETTCHHHH--HHH----HHHHHHCCSSEEEEEE
T ss_pred CCCCCcC-------------------------HHHHhcCCCCEEEEEccccCCCC--HHH----HHHHHhhCCCeEEEEe
Confidence 9864321 02345678999999999999875 333 3445555678999999
Q ss_pred CCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 713 PFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 713 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++++|.+...+....+.+.+.+||.++++
T Consensus 195 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 195 PRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 99999976556678899999999998873
No 42
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.87 E-value=1.3e-21 Score=191.72 Aligned_cols=207 Identities=15% Similarity=0.106 Sum_probs=156.6
Q ss_pred EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475 482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 561 (751)
Q Consensus 482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~ 561 (751)
+.++++..+|..+.++++.|.+ ++.|+||++||.+. ... ........|+++||.|++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~-----------~~~----~~~~~~~~l~~~g~~v~~-- 60 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFG-----------VNA----FMRETVSWLVDQGYAAVC-- 60 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTB-----------SCH----HHHHHHHHHHHTTCEEEE--
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCC-----------CCH----HHHHHHHHHHhCCcEEEe--
Confidence 3456777788899999999874 24799999999631 111 112456678889999999
Q ss_pred CCCCCCCCCCCCC-----------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475 562 SIPIIGEGDKLPN-----------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 624 (751)
Q Consensus 562 ~~~~~g~g~~~~~-----------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~ 624 (751)
.+.+|+|.+... ........+|+.++++++.++..++ .+|+++|||+||.+|+.++.++|
T Consensus 61 -~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~- 137 (236)
T 1zi8_A 61 -PDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY- 137 (236)
T ss_dssp -ECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC-
T ss_pred -ccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC-
Confidence 445555544221 1123455789999999998876545 69999999999999999999997
Q ss_pred ceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC
Q 004475 625 LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 704 (751)
Q Consensus 625 ~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~ 704 (751)
++++++++|.... +....+.++++|+|+++|++|..+| ...++.+++.+...+
T Consensus 138 -~~~~v~~~~~~~~------------------------~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 190 (236)
T 1zi8_A 138 -VDRAVGYYGVGLE------------------------KQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGANP 190 (236)
T ss_dssp -SSEEEEESCSSGG------------------------GCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTCT
T ss_pred -ccEEEEecCcccc------------------------cchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhCC
Confidence 8899988874211 1223456678999999999999999 999999999987655
Q ss_pred CcEEEEEeCCCCCcCCccc-------cHHHHHHHHHHHHHHHhcC
Q 004475 705 ALSRLVLLPFEHHVYAARE-------NVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 705 ~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~~~fl~~~l~~ 742 (751)
+++++++++++|.+.... ...+..+.+.+||.++++.
T Consensus 191 -~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 191 -LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp -TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred -CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999876432 2357889999999998864
No 43
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=3.8e-21 Score=197.77 Aligned_cols=229 Identities=14% Similarity=0.142 Sum_probs=163.4
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
..+..+.+++++.+|..+.++++.|.+ .++.|+||++||++... .. .......++++||.
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~~----------~~-----~~~~~~~l~~~g~~ 111 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY----------DG-----EIHEMVNWALHGYA 111 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS----------GG-----GHHHHHHHHHTTCE
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCCC----------CC-----CcccccchhhCCcE
Confidence 345678889988888899999999976 33589999999975210 01 11233477889999
Q ss_pred EEEcCCCCCCCCCCCCCC--------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 004475 557 VLAGPSIPIIGEGDKLPN--------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 616 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~--------------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~ 616 (751)
|+++++ +|+|.+... ..+.....+|+.++++++.++..+|+++|+++|||+||.+|+
T Consensus 112 v~~~d~---rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 188 (318)
T 1l7a_A 112 TFGMLV---RGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTI 188 (318)
T ss_dssp EEEECC---TTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred EEEecC---CCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHH
Confidence 999555 455544322 112457789999999999998878889999999999999999
Q ss_pred HHHHhCCCceeEEEEccCCCCCCCCccCcccccccchh--------------hH---HHHHhcCcccccCCCCCCEEEEE
Q 004475 617 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWE--------------AT---NVYIEMSPITHANKIKKPILIIH 679 (751)
Q Consensus 617 ~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~~~~~~P~li~~ 679 (751)
.++..+|+ ++++|+.+|........... .....|. .. ......++...+.++++|+|+++
T Consensus 189 ~~a~~~~~-~~~~v~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~ 265 (318)
T 1l7a_A 189 AAAALSDI-PKAAVADYPYLSNFERAIDV--ALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSI 265 (318)
T ss_dssp HHHHHCSC-CSEEEEESCCSCCHHHHHHH--CCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEE
T ss_pred HHhccCCC-ccEEEecCCcccCHHHHHhc--CCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEe
Confidence 99999975 77778777754311000000 0000010 01 11222345556778899999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 680 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 680 G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
|+.|.++| +..+.++++.+.. +++++++++++|... .+..+.+.+||.++++
T Consensus 266 g~~D~~~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 266 GLIDKVTP--PSTVFAAYNHLET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp ETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred ccCCCCCC--cccHHHHHhhcCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 99999998 8888888877643 489999999999842 3678899999999885
No 44
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.87 E-value=5.9e-21 Score=201.10 Aligned_cols=226 Identities=18% Similarity=0.209 Sum_probs=163.2
Q ss_pred ceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 480 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
..+.+.+... +|..+.+++|.|+++.+.+ ++|+||++||+|+.......+.... ..... ..........|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAGN-RGAVV--WAQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHSS-TTTTG--GGSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhcc-cccee--ecCccccccCCEEEE
Confidence 4577888887 8889999999998865433 5899999999875432211111110 00111 112234457889999
Q ss_pred EcCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 559 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
+++.++..+++..... ........+|+.++++++.++..+|++||+|+||||||++|+.++.++|++++++++++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9777654444432211 1111345788889999998887789999999999999999999999999999999999997
Q ss_pred CCCCCCccCcccccccchhhHHHHHhcCcccccCCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 004475 636 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 714 (751)
Q Consensus 636 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~ 714 (751)
.+. ..+.+++ +|+|++||+.|..+| +.++++++++|.+.+.+++++++|+
T Consensus 298 ~~~---------------------------~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GDV---------------------------SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CCG---------------------------GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CCh---------------------------hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 421 1122333 899999999999999 9999999999999999999999999
Q ss_pred C---CCcCCccccHHHHHH--HHHHHHHHH
Q 004475 715 E---HHVYAARENVMHVIW--ETDRWLQKY 739 (751)
Q Consensus 715 ~---~H~~~~~~~~~~~~~--~~~~fl~~~ 739 (751)
+ +|++.....+...+. .+++||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 9 444433334445555 889999865
No 45
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.87 E-value=3.7e-21 Score=199.71 Aligned_cols=232 Identities=16% Similarity=0.196 Sum_probs=167.4
Q ss_pred ccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe
Q 004475 476 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 555 (751)
Q Consensus 476 ~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 555 (751)
...+..+.+.+++.+|..+.++++.|.+. .++.|+||++||+|... .+ ......++++||
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~------------~~----~~~~~~l~~~G~ 122 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGR------------GF----PHDWLFWPSMGY 122 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCC------------CC----GGGGCHHHHTTC
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCC------------CC----chhhcchhhCCC
Confidence 34467899999988899999999999763 23589999999976321 01 122346688999
Q ss_pred EEEEcCCCCCCCCCCCC-----CC----------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Q 004475 556 AVLAGPSIPIIGEGDKL-----PN----------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGH 608 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~-----~~----------------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~ 608 (751)
+|++++++ |+|.+. .. ..+....++|+.++++++.++..+|+++|+++||
T Consensus 123 ~v~~~d~r---G~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~ 199 (337)
T 1vlq_A 123 ICFVMDTR---GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGG 199 (337)
T ss_dssp EEEEECCT---TCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred EEEEecCC---CCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 99995554 444221 11 1123477899999999999988888899999999
Q ss_pred ChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchh---------------hHHHHHhcCcccccCCCCC
Q 004475 609 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWE---------------ATNVYIEMSPITHANKIKK 673 (751)
Q Consensus 609 S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 673 (751)
|+||.+|+.++.+.| +++++|+.+|........... .....+. ....+...++...+.++++
T Consensus 200 S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 276 (337)
T 1vlq_A 200 SQGGGIALAVSALSK-KAKALLCDVPFLCHFRRAVQL--VDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKI 276 (337)
T ss_dssp THHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHH--CCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCS
T ss_pred CHHHHHHHHHHhcCC-CccEEEECCCcccCHHHHHhc--CCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCC
Confidence 999999999999997 589999888864421000000 0000000 0112234456667788999
Q ss_pred CEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 674 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 674 P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
|+|+++|+.|.++| +..+.++++++.. +++++++++++|.+. .....+.+.+||.+++..
T Consensus 277 P~lii~G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 277 PALFSVGLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp CEEEEEETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC-
T ss_pred CEEEEeeCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHhc
Confidence 99999999999998 8998888877753 589999999999963 235678899999998863
No 46
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=1e-19 Score=189.61 Aligned_cols=307 Identities=14% Similarity=0.121 Sum_probs=193.4
Q ss_pred ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
..+..|++ ||++|||+....... ......+||++++++++.++| . .+..++|||||++|+|.+.....
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~~~l---~------~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNARRFI---E------NATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCEEEE---E------SCEEEEECTTSSEEEEEEEETTT
T ss_pred EEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCceEEc---c------cCCCeEECCCCCEEEEEEeccCC
Confidence 35678999 999999987532111 113468999999999998888 1 25678999999999998542110
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCCceEEeeeeCCCCceE
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKYV 189 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~~~~~~~~~SpDG~~i 189 (751)
...+||++++ +|+.++++....+..++|||||++|
T Consensus 83 --------------------------------------------~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l 118 (347)
T 2gop_A 83 --------------------------------------------KVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKL 118 (347)
T ss_dssp --------------------------------------------TEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEE
T ss_pred --------------------------------------------CcceEEEEECCCCceEEEEcCCCccceeECCCCCEE
Confidence 1258999999 5677777765338899999999999
Q ss_pred EEEEecCCc--ccc-c---c---cC-----CCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475 190 LITSMHRPY--SYK-V---P---CA-----RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (751)
Q Consensus 190 ~~~~~~~~~--~~~-~---~---~~-----~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~ 254 (751)
+|.+...+. .+. . + .+ .....|+++++++++. ++++. + .+..+.|||||
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--------------~~~~~~~spdg- 182 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--------------RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--------------TTCEEEEETTE-
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--------------CcccccCCCCe-
Confidence 998754210 000 0 0 00 1136799999998877 66643 2 23478999999
Q ss_pred ceEEEEEeccCCCCccccCc-ccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecc----cceeEEEec
Q 004475 255 STLYWVEAQDRGDANVEVSP-RDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKT----SQTRTWLVC 329 (751)
Q Consensus 255 ~~i~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~l~~~~ 329 (751)
. ++... .+.... ... ...||+++ . + ..+.++.. ..+. .+||||++|+|.+.... ...+||+++
T Consensus 183 ~-~~~~~-~~~~~~---~~~~~~~l~~~d-~---~-~~~~l~~~-~~~~-~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 183 I-VVNVP-HREIIP---QYFKFWDIYIWE-D---G-KEEKMFEK-VSFY-AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp E-EEEEE-CCCSSC---CSSCCEEEEEEE-T---T-EEEEEEEE-ESEE-EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred E-EEEEe-cccccc---cccccccEEEeC-C---C-ceEEeccC-ccee-eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 3 44432 211100 001 34788887 3 3 45556554 3333 44999999999874431 246899999
Q ss_pred CCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 330 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 330 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
+ ++.+.++......+. ..+.|+ || +++..... ...+|| ++ +|+...+
T Consensus 251 --~--~~~~~l~~~~~~~~~-----~~~~~s-dg--~~~~~~~~------------------~~~~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 251 --G--KEVMGILDEVDRGVG-----QAKIKD-GK--VYFTLFEE------------------GSVNLY-IW--DGEIKPI 297 (347)
T ss_dssp --S--SCEEESSTTCCSEEE-----EEEEET-TE--EEEEEEET------------------TEEEEE-EE--SSSEEEE
T ss_pred --C--CceEeccccCCcccC-----CccEEc-Cc--EEEEEecC------------------CcEEEE-Ec--CCceEEE
Confidence 4 244555433211111 016699 88 55555221 234677 77 4666666
Q ss_pred eeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC
Q 004475 410 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP 472 (751)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~ 472 (751)
...+.. +. .++|++ .++++..+...+..||.++ |+.++||..+..
T Consensus 298 ~~~~~~-----v~-------~~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~ 342 (347)
T 2gop_A 298 AKGRHW-----IM-------GFDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDP 342 (347)
T ss_dssp ECSSSE-----EE-------EEEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTST
T ss_pred ecCCCe-----EE-------eeeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHh
Confidence 543221 21 246777 5788888888888999998 778888887653
No 47
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.86 E-value=1.2e-21 Score=197.50 Aligned_cols=237 Identities=18% Similarity=0.184 Sum_probs=155.6
Q ss_pred eEEEEEEc-CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 481 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~-~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
.+.+++.+ ..+..+.+.+|+|+++.+. +++|+||++||++... ..+.... .....++.+||+|++
T Consensus 17 ~~~~~~~s~~~g~~~~~~v~~P~~~~~~--~~~p~vv~lHG~~~~~-----------~~~~~~~-~~~~~~~~~g~~vv~ 82 (280)
T 3i6y_A 17 HKQYSHVSNTLNCAMRFAIYLPPQASTG--AKVPVLYWLSGLTCSD-----------ENFMQKA-GAQRLAAELGIAIVA 82 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGTT--CCEEEEEEECCTTCCS-----------SHHHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEeccccCCeeEEEEEeCCCCCCC--CCccEEEEecCCCCCh-----------hHHhhcc-cHHHHHhhCCeEEEE
Confidence 45566655 4577899999999876433 3599999999975321 1111100 123455678999999
Q ss_pred cCCCCCCC------------CCCCCC----C------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004475 560 GPSIPIIG------------EGDKLP----N------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 617 (751)
Q Consensus 560 ~~~~~~~g------------~g~~~~----~------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~ 617 (751)
++.+ .+| .|.+.. . ..+.....+ ++++++.+...+ +++|+|+||||||++|+.
T Consensus 83 pd~~-~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~ 157 (280)
T 3i6y_A 83 PDTS-PRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVN---ELPELIESMFPV-SDKRAIAGHSMGGHGALT 157 (280)
T ss_dssp ECSS-CCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHT---HHHHHHHHHSSE-EEEEEEEEETHHHHHHHH
T ss_pred eCCc-ccccccCcccccccccCccccccccCCCccchhhHHHHHHH---HHHHHHHHhCCC-CCCeEEEEECHHHHHHHH
Confidence 6642 111 111100 0 012222333 444555554434 579999999999999999
Q ss_pred HHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCC--CCEEEEEcCCCCCCCCChHH-HH
Q 004475 618 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQ-AE 694 (751)
Q Consensus 618 ~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~li~~G~~D~~vp~~~~~-~~ 694 (751)
++.++|++++++++++|..+....++.........-.....+...++...+.+++ +|+|++||+.|.++| ... ++
T Consensus 158 ~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~ 235 (280)
T 3i6y_A 158 IALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLKPE 235 (280)
T ss_dssp HHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTCHH
T ss_pred HHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhhHH
Confidence 9999999999999999987643222110000000001112233445555555554 899999999999987 544 78
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 695 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 695 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++.++|++.+.+++++++|+++|.+.. +...+.++++|+.++|+
T Consensus 236 ~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 236 VLEAAASSNNYPLELRSHEGYDHSYYF---IASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCceEEEeCCCCccHHH---HHHhHHHHHHHHHhhcc
Confidence 999999999999999999999998643 55778889999999875
No 48
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.86 E-value=2.1e-20 Score=180.89 Aligned_cols=211 Identities=13% Similarity=0.148 Sum_probs=157.8
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
...+.++++..+| .+.++++.|.+..+ .+.|+||++||+|+..+.. . ..........|+++||.|+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~~--------~--~~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGSM--------H--NKVVTMAARALRELGITVV 73 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCST--------T--CHHHHHHHHHHHTTTCEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCcc--------c--chHHHHHHHHHHHCCCeEE
Confidence 4578899998887 89999999976211 2379999999965321100 0 0011245567888999999
Q ss_pred EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475 559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 638 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~ 638 (751)
+ .+++|+|.+...........+|+.++++++.++. +.++|+++|||+||.+|+.++.++ +++++|+.+|....
T Consensus 74 ~---~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 74 R---FNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp E---ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred E---EecCCCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 9 4455776665443344567899999999999874 567999999999999999999887 79999999997553
Q ss_pred CCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCc
Q 004475 639 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 718 (751)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 718 (751)
.. ...+. ...|+|+++|++|..+| ...++++++.+. .+++++++++++|.
T Consensus 147 ~~------------------------~~~~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~ 196 (220)
T 2fuk_A 147 WD------------------------FSDVQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHF 196 (220)
T ss_dssp BC------------------------CTTCC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTT
T ss_pred hh------------------------hhhcc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCce
Confidence 21 00111 25799999999999998 888888776663 46789999999999
Q ss_pred CCccccHHHHHHHHHHHHHHHhcC
Q 004475 719 YAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 719 ~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+.. ...++.+.+.+||.+++..
T Consensus 197 ~~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 197 FHR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp CTT--CHHHHHHHHHHHHGGGCSS
T ss_pred ehh--hHHHHHHHHHHHHHHHhhc
Confidence 864 4668889999999998864
No 49
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.86 E-value=6.9e-21 Score=191.71 Aligned_cols=202 Identities=17% Similarity=0.163 Sum_probs=143.0
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 589 (751)
.+.||++||.+ +++..| ..++..|+++||.|++ ++.+|+|.+... .....+.++|+.+++
T Consensus 51 ~~~VlllHG~~-----------~s~~~~----~~la~~La~~Gy~Via---~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFT-----------GSPQSM----RFLAEGFARAGYTVAT---PRLTGHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTT-----------CCGGGG----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCC-----------CCHHHH----HHHHHHHHHCCCEEEE---ECCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 46799999942 222222 2456788999999999 667788876321 223456789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-----------cCc-------ccc---
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----------FGF-------QTE--- 648 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-----------~~~-------~~~--- 648 (751)
++|.+.. ++++|+||||||.+|+.++.++|++++++|++++........ ... ...
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9997753 589999999999999999999999999999999875421100 000 000
Q ss_pred ----cccchhhHHHHHhc--CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc
Q 004475 649 ----FRTLWEATNVYIEM--SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 722 (751)
Q Consensus 649 ----~~~~~~~~~~~~~~--~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 722 (751)
...++.....+... .....+.++++|+|++||++|.++| +..++.+++.+.. .+++++++|+++|.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIGS--TEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCCC--SSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCCC--CCcEEEEECCCCCcCccc
Confidence 00011111111000 0113467889999999999999999 8999888887753 467999999999987655
Q ss_pred ccHHHHHHHHHHHHHHH
Q 004475 723 ENVMHVIWETDRWLQKY 739 (751)
Q Consensus 723 ~~~~~~~~~~~~fl~~~ 739 (751)
...+.+.+.+.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 56788899999999875
No 50
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.86 E-value=2.3e-21 Score=195.28 Aligned_cols=235 Identities=15% Similarity=0.127 Sum_probs=154.8
Q ss_pred eEEEEEEc-CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 481 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~-~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
.+.+++.+ ..+..+.+.+|+|+++. .+++|+||++||++... ..+.... .....+..+||+|++
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~-----------~~~~~~~-~~~~~~~~~g~~vv~ 79 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTH-----------ANVMEKG-EYRRMASELGLVVVC 79 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS-----------HHHHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCc-----------cchhhcc-cHHHHHhhCCeEEEe
Confidence 44555544 45678999999998753 23589999999975321 1111100 123344566999999
Q ss_pred cCCCCCCCCCCCCCCc-------------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 004475 560 GPSIPIIGEGDKLPND-------------------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 614 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~-------------------------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~ 614 (751)
++. +|+|.+.... .+..... .++++++.+...+|+++|+|+||||||++
T Consensus 80 ~d~---~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 153 (278)
T 3e4d_A 80 PDT---SPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVT---EELPALIGQHFRADMSRQSIFGHSMGGHG 153 (278)
T ss_dssp CCS---SCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHH---THHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred cCC---cccCcccccccccccccCCccccccCCcCcccchhhHHHHHH---HHHHHHHHhhcCCCcCCeEEEEEChHHHH
Confidence 554 3444321110 1122222 24666676665677889999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCC--CCCEEEEEcCCCCCCCCChHH
Q 004475 615 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQ 692 (751)
Q Consensus 615 a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~li~~G~~D~~vp~~~~~ 692 (751)
|+.++.++|+.++++++++|..+....++.........-.....+...++...+.++ .+|+|++||+.|.++| ...
T Consensus 154 a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~ 231 (278)
T 3e4d_A 154 AMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--KGL 231 (278)
T ss_dssp HHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--HHT
T ss_pred HHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--cch
Confidence 999999999999999999998764433221110000000111222334444444443 4699999999999986 432
Q ss_pred -HHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 693 -AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 693 -~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++++.++|++.+.+++++++|+++|.+.. +...+..+++|+.++|+
T Consensus 232 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 232 RPWLFEEAIKGTDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp CTHHHHHHHTTSSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 68899999999999999999999998643 45678888999988774
No 51
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=9.9e-20 Score=209.25 Aligned_cols=309 Identities=14% Similarity=0.158 Sum_probs=195.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCC-----CCeeeccC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-----GEAKPLFE 79 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~-----g~~~~lt~ 79 (751)
..|+++|+.+ |+.++++.. ...+..++|||||++|||+. ..+||++++++ ++.++++.
T Consensus 101 ~~i~~~d~~~----~~~~~l~~~--~~~~~~~~~SpdG~~la~~~-----------~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLA----RKVTYLFDT--NEETASLDFSPVGDRVAYVR-----------NHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTT----TEEEEEECC--TTCCTTCEECTTSSEEEEEE-----------TTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCC----CceEEccCC--cccccCCcCCCCCCEEEEEE-----------CCeEEEEecCcccccCCCcEEecc
Confidence 4799999988 888887743 23578999999999999963 26899999999 99998876
Q ss_pred CCCccc-cc---------eeeeeEEecCCcEEEEeecCCCCCCCCC--CCCCCCCceeeccccccccchhhhhccCCccc
Q 004475 80 SPDICL-NA---------VFGSFVWVNNSTLLIFTIPSSRRDPPKK--TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYD 147 (751)
Q Consensus 80 ~~~~~~-~~---------~~~~~~wspDg~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (751)
...... ++ .+..++|||||++|+|.+.+........ ......+.... ..++..
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~---------------~~y~~~ 228 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP---------------LYYPMA 228 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE---------------ECCCBT
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE---------------eeCCCC
Confidence 654211 00 0368899999999999874322211000 00000000000 001111
Q ss_pred hhhhhhheeeEEEEEcC-CCCceecCC---C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc-ee
Q 004475 148 ESLFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LV 221 (751)
Q Consensus 148 ~~~~~~~~~~~l~~~~~-~G~~~~lt~---~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 221 (751)
+. ......|+++|+ +|+.+++.. + ..+..++|||||++|++...++.. ....|++||++++ ..
T Consensus 229 g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 229 GT---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFV 297 (706)
T ss_dssp TS---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEE
T ss_pred CC---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCcee
Confidence 00 012368999999 666666552 2 557799999999999997654321 1357999999987 55
Q ss_pred eeeccCCCCCCCCCccCCccCCCceeeeec--CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece
Q 004475 222 RELCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL 299 (751)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp--dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 299 (751)
+.+........ . ..+..+.||| ||+. ++..+ . +...+||.++.+ ++..+.++....
T Consensus 298 ~~~~~~~~~~~----~----~~~~~~~~sp~~dg~~-l~~~~-~---------~g~~~l~~~~~~---~~~~~~l~~~~~ 355 (706)
T 2z3z_A 298 RTLFVETDKHY----V----EPLHPLTFLPGSNNQF-IWQSR-R---------DGWNHLYLYDTT---GRLIRQVTKGEW 355 (706)
T ss_dssp EEEEEEECSSC----C----CCCSCCEECTTCSSEE-EEEEC-T---------TSSCEEEEEETT---SCEEEECCCSSS
T ss_pred eEEEEccCCCe----E----CccCCceeecCCCCEE-EEEEc-c---------CCccEEEEEECC---CCEEEecCCCCe
Confidence 55532111100 0 0123679999 9985 44322 1 123478888864 555666666655
Q ss_pred eEE--EEEecCCceEEEeeeecc-cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCc
Q 004475 300 RFS--VSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 376 (751)
Q Consensus 300 ~~~--~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 376 (751)
.+. +.|||||+.|+|.+.... ....||.++++++ ..+.++... .+.. ++|||||++|++.....
T Consensus 356 ~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~--~~~~------~~~spdg~~l~~~~~~~--- 422 (706)
T 2z3z_A 356 EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTPES--GMHR------TQLSPDGSAIIDIFQSP--- 422 (706)
T ss_dssp CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCCSS--SEEE------EEECTTSSEEEEEEECS---
T ss_pred EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccCCC--ceEE------EEECCCCCEEEEEecCC---
Confidence 554 799999999998875432 2468999999884 345554321 1122 78999999999886321
Q ss_pred ceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 377 QIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
.....|++||+++++
T Consensus 423 --------------~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 423 --------------TVPRKVTVTNIGKGS 437 (706)
T ss_dssp --------------SCSCEEEEEESSSCE
T ss_pred --------------CCCcEEEEEECCCCe
Confidence 223469999998887
No 52
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=9.7e-20 Score=193.57 Aligned_cols=306 Identities=14% Similarity=0.064 Sum_probs=190.2
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
..+||++++.+ |+.++++... ......+.|||||++|||++. ..+||++++++++.++++..+.
T Consensus 59 ~~~l~~~d~~~----~~~~~l~~~~-~~~~~~~~~spdg~~l~~~~~----------~~~l~~~d~~~~~~~~~~~~~~- 122 (396)
T 3c5m_A 59 NRNYYLLNLET----QQAVQLTEGK-GDNTFGGFISTDERAFFYVKN----------ELNLMKVDLETLEEQVIYTVDE- 122 (396)
T ss_dssp SCEEEEEETTT----TEEEECCCSS-CBCTTTCEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECCT-
T ss_pred CceEEEEECCC----CcEEEeecCC-CCccccceECCCCCEEEEEEc----------CCcEEEEECCCCCcEEEEeccc-
Confidence 34799999988 9888887322 112334899999999999853 2379999999999988876543
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhh--hh----heee
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF--DY----YTTA 157 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~ 157 (751)
.|+|+|++|+|......... . . . . ...+.++..+ .. ....
T Consensus 123 ---------~~~~~g~~l~~~~~~~~~~~-----------~-~-~-----------~-~~~spdg~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 123 ---------EWKGYGTWVANSDCTKLVGI-----------E-I-L-----------K-RDWQPLTSWEKFAEFYHTNPTC 168 (396)
T ss_dssp ---------TEEEEEEEEECTTSSEEEEE-----------E-E-E-----------G-GGCCCCCSHHHHHHHHHTCCCE
T ss_pred ---------ccCCCCCEEEeccCCccccc-----------c-c-c-----------c-cccCCCCcceeeeeeccCCCcc
Confidence 38999999988633110000 0 0 0 0 0001111111 00 1336
Q ss_pred EEEEEcC-CCCceecCCC-ceEEeeeeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 158 QLVLGSL-DGTAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 158 ~l~~~~~-~G~~~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
.|+++++ +|+.+.++.. ..+..+.||| ||++|+|.+... .......|+++++++++.+.+.....
T Consensus 169 ~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~-------~~~~~~~l~~~d~~~~~~~~l~~~~~----- 236 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGP-------HDLVDARMWLVNEDGSNVRKIKEHAE----- 236 (396)
T ss_dssp EEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSC-------SSSCSCCCEEEETTSCCCEESSCCCT-----
T ss_pred eEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCC-------CCCCCceEEEEECCCCceeEeeccCC-----
Confidence 8999999 6677777654 6678899999 899999986421 11112579999998877666543110
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEec-CCceEE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCD-DSLALV 313 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~sp-dg~~l~ 313 (751)
...+..+.|||||++ |++.+..++ ..+..|++++++ ++..+.+....+.. +.||| ||+.|+
T Consensus 237 ------~~~~~~~~~spdg~~-l~~~~~~~~-------~~~~~l~~~d~~---~g~~~~l~~~~~~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 237 ------GESCTHEFWIPDGSA-MAYVSYFKG-------QTDRVIYKANPE---TLENEEVMVMPPCS-HLMSNFDGSLMV 298 (396)
T ss_dssp ------TEEEEEEEECTTSSC-EEEEEEETT-------TCCEEEEEECTT---TCCEEEEEECCSEE-EEEECSSSSEEE
T ss_pred ------CccccceEECCCCCE-EEEEecCCC-------CccceEEEEECC---CCCeEEeeeCCCCC-CCccCCCCceEE
Confidence 112346799999999 677642211 111349999986 45555555443322 78999 999887
Q ss_pred Eeeee------------cccceeEEEecCCCCCCcceeeeeccccc-c---cCCCCCCCeeeCCCCCEEEEeeeecCCcc
Q 004475 314 NETWY------------KTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V---YSDPGSPMMTRTSTGTNVIAKIKKENDEQ 377 (751)
Q Consensus 314 ~~~~~------------~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~---~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 377 (751)
+.... ......||++++.++ ..+.++...... . ........++|||||+.|+|.+..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~----- 371 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAK--SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF----- 371 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTT--BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-----
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccC--ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-----
Confidence 75421 113468999999885 445565433210 0 000001126799999999998832
Q ss_pred eEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 378 IYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
.....||++++.+++.+.+
T Consensus 372 -------------~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 372 -------------EGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp -------------TSSCEEEEEECCTTCC---
T ss_pred -------------CCCceEEEEEEcccccccc
Confidence 1245799999988776554
No 53
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.85 E-value=3.9e-20 Score=194.52 Aligned_cols=236 Identities=17% Similarity=0.145 Sum_probs=164.2
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
..+..+.+.+.+.+|..+.++++.|.+ .+ .++.|+||++||++.. ...+.......|+++||.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~--------------~~~~~~~~~~~l~~~G~~ 126 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAV--------------KEQSSGLYAQTMAERGFV 126 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCC--------------TTSHHHHHHHHHHHTTCE
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCc--------------chhhHHHHHHHHHHCCCE
Confidence 345678899998888899999999976 21 2358999999997421 111111246678899999
Q ss_pred EEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcc
Q 004475 557 VLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 633 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 633 (751)
|++ .+++|+|.+.... .......+|+.++++++.++..+|.++|+++|||+||.+++.++.++| +++++|+.+
T Consensus 127 v~~---~d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~ 202 (367)
T 2hdw_A 127 TLA---FDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTST 202 (367)
T ss_dssp EEE---ECCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred EEE---ECCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEec
Confidence 999 4455666553221 224667899999999999988788889999999999999999999997 689999998
Q ss_pred CCCCC-----CCCc--------------------------cC----cc---ccc--------------------------
Q 004475 634 GSYNK-----TLTP--------------------------FG----FQ---TEF-------------------------- 649 (751)
Q Consensus 634 ~~~d~-----~~~~--------------------------~~----~~---~~~-------------------------- 649 (751)
|.... .... +. .+ ...
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (367)
T 2hdw_A 203 MYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGN 282 (367)
T ss_dssp CCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTC
T ss_pred cccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccc
Confidence 75210 0000 00 00 000
Q ss_pred ccchhhHHHHHhcCcccccCCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHH
Q 004475 650 RTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHV 728 (751)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 728 (751)
.........+...++...+.+++ +|+|++||++|. + ...++++++. .+.+++++++|+++|..........+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~ 355 (367)
T 2hdw_A 283 AWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIP 355 (367)
T ss_dssp CCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSC
T ss_pred hhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHH
Confidence 00001122333445666778888 999999999998 6 7887777765 56789999999999985322221126
Q ss_pred HHHHHHHHHHHh
Q 004475 729 IWETDRWLQKYC 740 (751)
Q Consensus 729 ~~~~~~fl~~~l 740 (751)
.+.+.+||.+++
T Consensus 356 ~~~i~~fl~~~l 367 (367)
T 2hdw_A 356 FDRIAGFFDEHL 367 (367)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 788999998875
No 54
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.85 E-value=6.4e-21 Score=197.83 Aligned_cols=279 Identities=10% Similarity=0.022 Sum_probs=166.3
Q ss_pred CCEEEEEEecCCCCCeEEEEEcCCCceeEeecCCC--CCCCc---cCCceEEEEEEcCCCceEEEEEEcCCCC-CCCCCC
Q 004475 437 QLKILTSKESKTEITQYHILSWPLKKSSQITNFPH--PYPTL---ASLQKEMIKYQRKDGVPLTATLYLPPGY-DQSKDG 510 (751)
Q Consensus 437 g~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~--~~~~~---~~~~~e~i~~~~~~~~~i~~~~~~P~~~-~~~~~~ 510 (751)
...+.|...+...+...++++. +|...++...+. +.+.. ..+..+.+.+.. +..+.+.+|+|+.. .+ .+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~ 81 (338)
T 2o7r_A 7 ETTGSSDPNTNLLKYLPIVLNP-DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--SA 81 (338)
T ss_dssp -----------CTTTCSCEECT-TSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--SC
T ss_pred CCceeeccCcccccccceEECC-CCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--CC
Confidence 3455555444333444444553 344444321111 11121 346678888874 45688999999753 11 24
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 589 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 589 (751)
+.|+||++|||||..++. .. ......+..|+ ++||+|++++++ |.+... ....++|+.+++
T Consensus 82 ~~p~vv~~HGgg~~~~~~--------~~--~~~~~~~~~la~~~g~~vv~~d~r---g~~~~~-----~~~~~~d~~~~~ 143 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSA--------AS--TIFHDFCCEMAVHAGVVIASVDYR---LAPEHR-----LPAAYDDAMEAL 143 (338)
T ss_dssp CEEEEEEECCSTTTSCCT--------TB--HHHHHHHHHHHHHHTCEEEEEECC---CTTTTC-----TTHHHHHHHHHH
T ss_pred CceEEEEEcCCcCcCCCC--------Cc--hhHHHHHHHHHHHCCcEEEEecCC---CCCCCC-----CchHHHHHHHHH
Confidence 589999999987643221 11 00123455676 789999995554 443321 235678999999
Q ss_pred HHHHHcC------CCCCCcEEEEEeChHHHHHHHHHHhCCC--------ceeEEEEccCCCCCCCCccCc---ccccccc
Q 004475 590 EEVVRRG------VADPSRIAVGGHSYGAFMTAHLLAHAPH--------LFCCGIARSGSYNKTLTPFGF---QTEFRTL 652 (751)
Q Consensus 590 ~~l~~~~------~id~~~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~d~~~~~~~~---~~~~~~~ 652 (751)
+|+.++. .+|.++|+|+||||||++|+.++.++|+ +++++|+.+|.++........ .......
T Consensus 144 ~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (338)
T 2o7r_A 144 QWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLP 223 (338)
T ss_dssp HHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSC
T ss_pred HHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccC
Confidence 9998762 2566899999999999999999999887 899999999986533210000 0000000
Q ss_pred hhhHHH-HH------------hcCcc---------cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475 653 WEATNV-YI------------EMSPI---------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 710 (751)
Q Consensus 653 ~~~~~~-~~------------~~~~~---------~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~ 710 (751)
...... +. ..++. ..+.++.+|+|+++|++|.+++ .+.+++++|++.+.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~----~~~~~~~~l~~~~~~~~~~ 299 (338)
T 2o7r_A 224 TFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID----RQMELAERLEKKGVDVVAQ 299 (338)
T ss_dssp HHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH----HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH----HHHHHHHHHHHCCCcEEEE
Confidence 000000 00 00111 1122345699999999999864 4577889999988999999
Q ss_pred EeCCCCCcCCcc--ccHHHHHHHHHHHHHHHhcC
Q 004475 711 LLPFEHHVYAAR--ENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 711 ~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~l~~ 742 (751)
++++++|.+... +....+.+.+.+||.+++..
T Consensus 300 ~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 300 FDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp EESSCCTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred EECCCceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 999999987532 23467889999999988753
No 55
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.85 E-value=2.6e-21 Score=195.32 Aligned_cols=240 Identities=18% Similarity=0.164 Sum_probs=153.1
Q ss_pred eEEEEEEc-CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 481 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~-~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
.+.+++.+ ..+..+.+.+|+|+++.. +++|+||++||+++... .+... ......++++||+|++
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~vv~ 80 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQ-----------NFISK-SGYHQSASEHGLVVIA 80 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSH-----------HHHHH-SCCHHHHHHHTCEEEE
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCcc-----------chhhc-chHHHHhhcCCeEEEE
Confidence 34444443 456789999999987532 35999999999863221 11100 0124567789999999
Q ss_pred cCCCCCCCCCCCC-----------------CCchhH---HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 004475 560 GPSIPIIGEGDKL-----------------PNDRFV---EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 619 (751)
Q Consensus 560 ~~~~~~~g~g~~~-----------------~~~~~~---~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a 619 (751)
++.. .+|.+... ....+. ......+..+++++.+...+|++||+|+||||||++|+.++
T Consensus 81 ~d~~-~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 159 (282)
T 3fcx_A 81 PDTS-PRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICA 159 (282)
T ss_dssp ECSC-SSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eccc-cCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHH
Confidence 7651 13322110 000110 11122233555666655558889999999999999999999
Q ss_pred HhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccc---cCCCCCCEEEEEcCCCCCCCCChHH--HH
Q 004475 620 AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITH---ANKIKKPILIIHGEVDDKVGLFPMQ--AE 694 (751)
Q Consensus 620 ~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~li~~G~~D~~vp~~~~~--~~ 694 (751)
.++|++++++++++|..+....++...............+...++... +..+++|+|++||+.|.++| ... ++
T Consensus 160 ~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~ 237 (282)
T 3fcx_A 160 LKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLPD 237 (282)
T ss_dssp HTSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCHH
T ss_pred HhCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhHH
Confidence 999999999999999876432221100000000000111222333333 33447999999999999986 443 56
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 695 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 695 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++.++|++.+.+++++++|+++|.+.. +...+.+.+.|+.++|.
T Consensus 238 ~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 238 NFIAACTEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 889999999999999999999999743 55678888999998875
No 56
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.85 E-value=9.8e-20 Score=186.74 Aligned_cols=234 Identities=18% Similarity=0.114 Sum_probs=162.5
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCe
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 555 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 555 (751)
..+..+.++++..++ .+.+.+|.|.+ .++.|+||++|||||..++. ..+ ...+..|+. .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g~~--------~~~----~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLGDI--------ESY----DPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSCCT--------TTT----HHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccCCh--------HHH----HHHHHHHHHhcCC
Confidence 456788999987766 89999999975 23479999999998643221 111 244566775 499
Q ss_pred EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEEeChHHHHHHHHHHhCCCce---eEEE
Q 004475 556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV-A-DPSRIAVGGHSYGAFMTAHLLAHAPHLF---CCGI 630 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~-i-d~~~i~l~G~S~GG~~a~~~a~~~p~~~---~~~v 630 (751)
.|+++++ +|.++... ....+|+.++++|+.+... + |+++|+|+|+|+||.+|+.++.+.|++. +++|
T Consensus 123 ~Vv~~Dy---rg~~~~~~-----p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDY---RLAPENKF-----PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECC---CCTTTSCT-----THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecC---CCCCCCCC-----cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 9999554 55555321 3457888999999987631 2 7889999999999999999999887765 8999
Q ss_pred EccCCCCCCCCccCcccc-cccchhh--H----HHH---------HhcCcccc-cCCCCCCEEEEEcCCCCCCCCChHHH
Q 004475 631 ARSGSYNKTLTPFGFQTE-FRTLWEA--T----NVY---------IEMSPITH-ANKIKKPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 631 ~~~~~~d~~~~~~~~~~~-~~~~~~~--~----~~~---------~~~~~~~~-~~~~~~P~li~~G~~D~~vp~~~~~~ 693 (751)
+++|..+........... ....+.. . ..| ...+++.. +..+ +|+||++|+.|.++ .++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~----~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLR----DQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTH----HHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccH----HHH
Confidence 999987643221000000 0000000 0 001 01123222 2222 49999999999974 567
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHhc
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 741 (751)
..+++++...+.+++++++++++|.+... +....+.+.+.+||.+++.
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999998642 3456889999999999875
No 57
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.85 E-value=4.9e-21 Score=193.06 Aligned_cols=237 Identities=16% Similarity=0.191 Sum_probs=154.9
Q ss_pred eEEEEEEc-CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 481 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~-~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
.+.+++.+ ..+..+.+.+|+|+++.+. +++|+||++||+++.. ..+... ......++.+||+|++
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~~~--~~~P~vv~lHG~~~~~-----------~~~~~~-~~~~~~~~~~g~~vv~ 80 (280)
T 3ls2_A 15 HKQYTHSAVSTHCTMRFAVFLPPGASES--NKVPVLYWLSGLTCTD-----------ENFMQK-AGAFKKAAELGIAIVA 80 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCBTT--BCEEEEEEECCTTCCS-----------HHHHHH-SCCHHHHHHHTCEEEE
T ss_pred EEEEEEechhcCCceEEEEEcCCCCCCC--CCcCEEEEeCCCCCCh-----------hhhhcc-hhHHHHHhhCCeEEEE
Confidence 45566655 4577899999999986533 3599999999975321 111100 0123455678999999
Q ss_pred cCCCCCCC------------CCCCCC----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004475 560 GPSIPIIG------------EGDKLP----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 617 (751)
Q Consensus 560 ~~~~~~~g------------~g~~~~----------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~ 617 (751)
++.+ .+| .|.+.. ...+.....++ ++.++.+...+ .++++|+||||||++|+.
T Consensus 81 ~d~~-~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~ 155 (280)
T 3ls2_A 81 PDTS-PRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNE---LPALIEQHFPV-TSTKAISGHSMGGHGALM 155 (280)
T ss_dssp CCSS-CCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTH---HHHHHHHHSSE-EEEEEEEEBTHHHHHHHH
T ss_pred eCCc-ccccccccccccccccCCccccccccccccccccHHHHHHHH---HHHHHHhhCCC-CCCeEEEEECHHHHHHHH
Confidence 6642 111 111100 01223333333 34455444333 379999999999999999
Q ss_pred HHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCC----CCCEEEEEcCCCCCCCCChHH-
Q 004475 618 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI----KKPILIIHGEVDDKVGLFPMQ- 692 (751)
Q Consensus 618 ~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~P~li~~G~~D~~vp~~~~~- 692 (751)
++.++|+.|+++++++|..+....++...............+...++...+.++ .+|+|++||+.|.+++ ...
T Consensus 156 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~ 233 (280)
T 3ls2_A 156 IALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQLK 233 (280)
T ss_dssp HHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CCCC
T ss_pred HHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--Cchh
Confidence 999999999999999998764332211000000000111223344555555554 4699999999999998 543
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 693 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 693 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+++++++|++.+.+++++++|+++|.+.. +...+..+++|+.++|.
T Consensus 234 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 234 PQNLVAVAKQKDYPLTLEMQTGYDHSYFF---ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCCchhh---HHHHHHHHHHHHHHHhc
Confidence 78899999999999999999999998643 55678888999999875
No 58
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.85 E-value=1.2e-20 Score=193.24 Aligned_cols=234 Identities=17% Similarity=0.155 Sum_probs=164.1
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCe
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRF 555 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~ 555 (751)
..+..+.++++..+|..|.+++|.|.+ ++.|+||++|||||..++. .. ....+..++ ..||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~~--------~~----~~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGNL--------DT----DHRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCCT--------TT----THHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCCh--------HH----HHHHHHHHHHHcCC
Confidence 456788999998888899999999975 2489999999998643321 11 124455666 4599
Q ss_pred EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeE
Q 004475 556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 628 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~ 628 (751)
+|++++++...++ ......+|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~--------~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEH--------PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCC--------CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 9999776533221 1245578899999999885 45788999999999999999999987654 4899
Q ss_pred EEEccCCCCCCCCccCcccccccchhh------HHHHHh-------cCcccccCCCC--CCEEEEEcCCCCCCCCChHHH
Q 004475 629 GIARSGSYNKTLTPFGFQTEFRTLWEA------TNVYIE-------MSPITHANKIK--KPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 629 ~v~~~~~~d~~~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~~~~--~P~li~~G~~D~~vp~~~~~~ 693 (751)
+++++|..+...............+.. ...|.. .++.. ...++ +|+||+||+.|.++ .++
T Consensus 190 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~l~~lpP~li~~G~~D~~~----~~~ 264 (317)
T 3qh4_A 190 QLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGR-RGQLAGLPATLITCGEIDPFR----DEV 264 (317)
T ss_dssp EEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGG-CSCCTTCCCEEEEEEEESTTH----HHH
T ss_pred EEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCc-ccccCCCCceeEEecCcCCCc----hhH
Confidence 999999987541110000000000100 011111 11111 11222 59999999999884 467
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHhc
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 741 (751)
.++.++|.+.+.+++++++++++|.|... +...++++.+.+||.+++.
T Consensus 265 ~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 265 LDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 88999999999999999999999997432 4457889999999999875
No 59
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=3.8e-19 Score=212.78 Aligned_cols=247 Identities=11% Similarity=0.013 Sum_probs=174.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
.+||.+++.+ +..+.++... ....++|||||++|||.. ...||++++++++...+.......
T Consensus 226 ~~l~~~~~~g----~~~~~l~~~~---~~~~~~~SpDG~~la~~~-----------~~~i~~~d~~~~~l~~l~~~~~~~ 287 (1045)
T 1k32_A 226 GQIYSTDLDG----KDLRKHTSFT---DYYPRHLNTDGRRILFSK-----------GGSIYIFNPDTEKIEKIEIGDLES 287 (1045)
T ss_dssp CEEEEEETTS----CSCEECCCCC---SSCEEEEEESSSCEEEEE-----------TTEEEEECTTTCCEEECCCCCCCB
T ss_pred eEEEEEeCCC----CcceEecCCC---CcceeeEcCCCCEEEEEe-----------CCEEEEecCCceEeeeeccCcccc
Confidence 4688888877 7778776322 356789999999999953 368999998666555543321000
Q ss_pred ------ccceeeeeEEe-cCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheee
Q 004475 85 ------LNAVFGSFVWV-NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (751)
Q Consensus 85 ------~~~~~~~~~ws-pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (751)
....+..++|| |||++|++.+. .
T Consensus 288 ~~~~~~~~~~v~~~~~S~pdG~~la~~~~--------------------------------------------------~ 317 (1045)
T 1k32_A 288 PEDRIISIPSKFAEDFSPLDGDLIAFVSR--------------------------------------------------G 317 (1045)
T ss_dssp CCSEEEECGGGGEEEEEECGGGCEEEEET--------------------------------------------------T
T ss_pred cccccccccccceeeecCCCCCEEEEEEc--------------------------------------------------C
Confidence 01125688999 99999999841 4
Q ss_pred EEEEEcC-CCCceecCCC-c-eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEE-EEeCCCceeeeeccCCCCCCC
Q 004475 158 QLVLGSL-DGTAKDFGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQ-VWTTDGKLVRELCDLPPAEDI 233 (751)
Q Consensus 158 ~l~~~~~-~G~~~~lt~~-~-~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~-~~d~~~~~~~~l~~~~~~~~~ 233 (751)
.|+++++ +|+.++++.+ . .+..++|| ||++|++.+. ...++ ++++++++.+.+....
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-------------~~~l~~~~d~~~~~~~~l~~~~----- 378 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-------------EGDFLGIYDYRTGKAEKFEENL----- 378 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-------------TEEEEEEEETTTCCEEECCCCC-----
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-------------CCceEEEEECCCCCceEecCCc-----
Confidence 7899999 5677777766 5 78899999 9999998754 23688 9999888777664211
Q ss_pred CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-eeceeEE-EEEecCCce
Q 004475 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS-VSWCDDSLA 311 (751)
Q Consensus 234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~-~~~spdg~~ 311 (751)
..+..++|||||++ |++.+ .++.|++++++ ++....+. ...+.+. ++|||||++
T Consensus 379 --------~~~~~~~~SpDG~~-la~~~------------~~~~v~~~d~~---tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 379 --------GNVFAMGVDRNGKF-AVVAN------------DRFEIMTVDLE---TGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp --------CSEEEEEECTTSSE-EEEEE------------TTSEEEEEETT---TCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred --------cceeeeEECCCCCE-EEEEC------------CCCeEEEEECC---CCceEEeccCCCCCccceEECCCCCe
Confidence 22457899999999 77754 23589999986 55555555 4455556 999999999
Q ss_pred EEEeeeec------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 312 LVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 312 l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
|++..... .....|++++++++ ..+.++...... .. ++|||||+.|++.+.
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~g--~~~~l~~~~~~~-~~------~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEGR--KIFAATTENSHD-YA------PAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTTT--EEEECSCSSSBE-EE------EEECTTSCEEEEEES
T ss_pred EEEEecCccccccCCCCCeEEEEECCCC--cEEEeeCCCccc-CC------ceEcCCCCEEEEEec
Confidence 99887543 23468999999884 345554432221 11 789999999998875
No 60
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.85 E-value=3.8e-21 Score=196.19 Aligned_cols=220 Identities=15% Similarity=0.100 Sum_probs=152.4
Q ss_pred CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCC
Q 004475 491 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD 570 (751)
Q Consensus 491 ~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~ 570 (751)
+..+...+|.|... .++.|+||++|||||..++. ..+ ...+..|+++||+|+++++ ++.+.
T Consensus 65 ~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~d~---r~~~~ 125 (303)
T 4e15_A 65 EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDM--------SMS----CSIVGPLVRRGYRVAVMDY---NLCPQ 125 (303)
T ss_dssp STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCG--------GGS----CTTHHHHHHTTCEEEEECC---CCTTT
T ss_pred CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCCh--------hHH----HHHHHHHHhCCCEEEEecC---CCCCC
Confidence 44567888888642 23589999999987654321 111 2346778899999999555 44443
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCC-------CceeEEEEccCCCCCCCCc
Q 004475 571 KLPNDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAP-------HLFCCGIARSGSYNKTLTP 642 (751)
Q Consensus 571 ~~~~~~~~~~~~~d~~~~v~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~p-------~~~~~~v~~~~~~d~~~~~ 642 (751)
. ......+|+..+++|+.+. ..+++++|+|+||||||++|+.++++.+ ++++++|+++|.++.....
T Consensus 126 ~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~ 200 (303)
T 4e15_A 126 V-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS 200 (303)
T ss_dssp S-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH
T ss_pred C-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh
Confidence 2 2456788999999999873 2356789999999999999999998653 2799999999987742211
Q ss_pred cCc-ccccccchhhHHHHHhcCcc-cccCCC----CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004475 643 FGF-QTEFRTLWEATNVYIEMSPI-THANKI----KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 716 (751)
Q Consensus 643 ~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 716 (751)
... ...........+.+...++. ..+.++ ++|+|++||++|..+| ..+++++++++++.|.+++++++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~g~~ 278 (303)
T 4e15_A 201 NLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYKASFTLFKGYD 278 (303)
T ss_dssp TCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred cccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCceEEEEeCCCC
Confidence 100 00001111122334455666 455555 8999999999999999 999999999999999999999999999
Q ss_pred CcCCccccHHHHHHHHHHHHH
Q 004475 717 HVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 717 H~~~~~~~~~~~~~~~~~fl~ 737 (751)
|... .+........+.+||.
T Consensus 279 H~~~-~~~~~~~~~~l~~~l~ 298 (303)
T 4e15_A 279 HFDI-IEETAIDDSDVSRFLR 298 (303)
T ss_dssp TTHH-HHGGGSTTSHHHHHHH
T ss_pred chHH-HHHHhCCCcHHHHHHH
Confidence 9532 3333333334455544
No 61
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.85 E-value=1.3e-19 Score=188.57 Aligned_cols=234 Identities=15% Similarity=0.150 Sum_probs=164.6
Q ss_pred CceEEE-EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475 479 LQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 557 (751)
Q Consensus 479 ~~~e~i-~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 557 (751)
+..+++ .+...+|..+.+.++.|.+ .+.|+||++||.+... . ....+...|+++||.|
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-----------~----~~~~~~~~l~~~g~~v 90 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS-----------G----RYEELARMLMGLDLLV 90 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------G----GGHHHHHHHHTTTEEE
T ss_pred cccccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc-----------c----hHHHHHHHHHhCCCeE
Confidence 444455 6677899999999998864 2369999999975211 1 1224566788889999
Q ss_pred EEcCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475 558 LAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 634 (751)
Q Consensus 558 ~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 634 (751)
++ ++.+|+|.+... .......++|+.++++++... .+..+|+|+|||+||.+|+.++.++|++++++|+++|
T Consensus 91 i~---~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 165 (342)
T 3hju_A 91 FA---HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISP 165 (342)
T ss_dssp EE---ECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESC
T ss_pred EE---EcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECc
Confidence 99 556677766432 233567789999999999887 3457899999999999999999999999999999998
Q ss_pred CCCCCCCccCcc-----------------cccccch-----hhHHHHHh---------------------cCcccccCCC
Q 004475 635 SYNKTLTPFGFQ-----------------TEFRTLW-----EATNVYIE---------------------MSPITHANKI 671 (751)
Q Consensus 635 ~~d~~~~~~~~~-----------------~~~~~~~-----~~~~~~~~---------------------~~~~~~~~~~ 671 (751)
............ ......+ .....+.. ......+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 245 (342)
T 3hju_A 166 LVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKL 245 (342)
T ss_dssp CCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGC
T ss_pred ccccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 765321110000 0000000 00000000 0112346778
Q ss_pred CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc--HHHHHHHHHHHHHHHhcC
Q 004475 672 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN--VMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 672 ~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~~~~fl~~~l~~ 742 (751)
++|+|+++|++|.++| ...+..+++.+.. ..++++++++++|.+..... ..+.+..+++||.+++..
T Consensus 246 ~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 246 TVPFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp CSCEEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCEEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999998 8888888877653 35799999999999864322 457788899999998864
No 62
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.84 E-value=3.9e-20 Score=189.35 Aligned_cols=235 Identities=17% Similarity=0.173 Sum_probs=162.7
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-Ce
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RF 555 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 555 (751)
.....+.++++..++ .+.+++|.|.+. .++.|+||++|||||..++. ..+ ...+..|+++ ||
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g~~--------~~~----~~~~~~la~~~g~ 106 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVGDL--------ETH----DPVCRVLAKDGRA 106 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSCCT--------TTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccCCh--------hHh----HHHHHHHHHhcCC
Confidence 446788899988776 899999999753 23489999999987643221 111 2455677775 99
Q ss_pred EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeE
Q 004475 556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 628 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~ 628 (751)
.|+++++ +|.+... .....+|+..+++|+.++. .+|+++|+|+||||||.+|+.++.++|+ .+++
T Consensus 107 ~v~~~d~---rg~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~ 178 (310)
T 2hm7_A 107 VVFSVDY---RLAPEHK-----FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF 178 (310)
T ss_dssp EEEEECC---CCTTTSC-----TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEeCC---CCCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceE
Confidence 9999555 4554432 1345788999999998864 3677899999999999999999998765 6999
Q ss_pred EEEccCCCCCC--CCccCcccc-cccchh--hH----HHH---------HhcCccc--ccCCCCCCEEEEEcCCCCCCCC
Q 004475 629 GIARSGSYNKT--LTPFGFQTE-FRTLWE--AT----NVY---------IEMSPIT--HANKIKKPILIIHGEVDDKVGL 688 (751)
Q Consensus 629 ~v~~~~~~d~~--~~~~~~~~~-~~~~~~--~~----~~~---------~~~~~~~--~~~~~~~P~li~~G~~D~~vp~ 688 (751)
+|+++|..+.. ......... ....+. .. ..| ...++.. .+..+ +|+|++||++|.++
T Consensus 179 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~-- 255 (310)
T 2hm7_A 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR-- 255 (310)
T ss_dssp EEEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--
T ss_pred EEEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--
Confidence 99999987654 110000000 000000 00 001 0112221 12222 49999999999974
Q ss_pred ChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHhc
Q 004475 689 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 689 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 741 (751)
.++..+++++++.+.+++++++++++|.+... +...++...+.+||.++++
T Consensus 256 --~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 256 --DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp --HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999987542 3446788999999998763
No 63
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.84 E-value=8.6e-20 Score=190.20 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=160.6
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCC------------CCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCc
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 544 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~------------~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~ 544 (751)
..+..+.+.+.. +..+.+.+|.|+.... ...++.|+||++|||||..+.. .. ....
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~--------~~--~~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSA--------NS--AIYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCT--------TB--HHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCC--------cc--hhHH
Confidence 345677787764 4568999999976420 1134689999999987643211 11 0012
Q ss_pred hHHHHHH-hCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChHHHHHHHH
Q 004475 545 TSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYGAFMTAHL 618 (751)
Q Consensus 545 ~~~~~~~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~----~id~~-~i~l~G~S~GG~~a~~~ 618 (751)
..+..|+ ++||+|++++++ |.+... .....+|+.++++|+.++. .+|++ +|+|+||||||++|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~r---g~~~~~-----~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYR---RAPENP-----YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCC---CCCCCC-----CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3456777 789999995554 443321 2355789999999998754 47888 99999999999999999
Q ss_pred HHhCCC---ceeEEEEccCCCCCCCCccCcccccccch---hhHH-HHHh------------cCc----ccccCCCCC-C
Q 004475 619 LAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFRTLW---EATN-VYIE------------MSP----ITHANKIKK-P 674 (751)
Q Consensus 619 a~~~p~---~~~~~v~~~~~~d~~~~~~~~~~~~~~~~---~~~~-~~~~------------~~~----~~~~~~~~~-P 674 (751)
+.++|+ +++++|+++|.++................ .... .+.. .++ ...+.++++ |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999887 89999999998763321100000000000 0000 0000 111 123444555 9
Q ss_pred EEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc---ccHHHHHHHHHHHHHH
Q 004475 675 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR---ENVMHVIWETDRWLQK 738 (751)
Q Consensus 675 ~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~ 738 (751)
+|+++|++|.++ ..+..++++|++.+.+++++++++++|.+... +....+.+.+.+||.+
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999999999985 35678899999998899999999999998642 4567788899999874
No 64
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.84 E-value=9.1e-20 Score=187.73 Aligned_cols=238 Identities=18% Similarity=0.148 Sum_probs=164.1
Q ss_pred cCCceEEEEEEcCCCc-eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CC
Q 004475 477 ASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RR 554 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~-~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G 554 (751)
..+..+.++++..+|. .+.+++|.|.+. .++.|+||++|||||..++ ...+ ...+..++. .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGT--------AESS----DPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCC--------GGGG----HHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccCC--------hhhh----HHHHHHHHHhcC
Confidence 4567888999888876 799999999742 2358999999998754321 1111 234556676 59
Q ss_pred eEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----cee
Q 004475 555 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 627 (751)
Q Consensus 555 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~ 627 (751)
|.|++++ ++|+|++.. ....+|+..+++|+.+. ..+|+++|+|+|||+||++|+.++.+.|+ .++
T Consensus 111 ~~Vv~~d---~rg~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVE---YRLAPETTF-----PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEEC---CCCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEec---CCCCCCCCC-----CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 9999954 456655422 23467888899999774 23677899999999999999999988765 489
Q ss_pred EEEEccCCCCCCCCccCccc-ccccchhh------HHHHHh--------------cCcccccCCCC--CCEEEEEcCCCC
Q 004475 628 CGIARSGSYNKTLTPFGFQT-EFRTLWEA------TNVYIE--------------MSPITHANKIK--KPILIIHGEVDD 684 (751)
Q Consensus 628 ~~v~~~~~~d~~~~~~~~~~-~~~~~~~~------~~~~~~--------------~~~~~~~~~~~--~P~li~~G~~D~ 684 (751)
++++++|..+.......... .....|.. ...|.. .++... ..++ +|+|++||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 99999998774432100000 00001100 011110 112211 1222 799999999998
Q ss_pred CCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc---cHHHHHHHHHHHHHHHhcCC
Q 004475 685 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 685 ~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~fl~~~l~~~ 743 (751)
+ ..++..++++|.+.+.+++++++++++|.+.... ...++++.+.+||.+++...
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 7 4577889999999999999999999999875332 25678899999999998643
No 65
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.84 E-value=3.3e-19 Score=178.65 Aligned_cols=225 Identities=12% Similarity=0.108 Sum_probs=153.7
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
.++..+...+|..+.+.+|.|.. .++.|+||++||+++..++ ...+.......+++. |.|+++
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~-----------~~~~~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGK-----------ANDLSPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCC-----------TTCSCHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCc-----------hhhhHHHHHHHHHhC-ceEEee
Confidence 45667778899999999999874 2357999999998643221 111222444555555 999995
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004475 561 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 561 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~ 640 (751)
|+ +|.+.. ......+|+.++++++.+. ++..+++|+||||||.+|+.++.+ ++++++|+.+|..+...
T Consensus 66 d~---~~~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SY---RLLPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CC---CCTTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred cc---ccCCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 54 455443 2356688999999999887 466899999999999999999999 78999999999876421
Q ss_pred CccCcc---------------------c---ccccchhhHHH-------------HHh-------cC-cccccCCCCCCE
Q 004475 641 TPFGFQ---------------------T---EFRTLWEATNV-------------YIE-------MS-PITHANKIKKPI 675 (751)
Q Consensus 641 ~~~~~~---------------------~---~~~~~~~~~~~-------------~~~-------~~-~~~~~~~~~~P~ 675 (751)
...... . ........... +.. .. ....+.+++ |+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 100000 0 00000000000 000 00 011135666 99
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccH--HHHHHHHHHHHHHHhc
Q 004475 676 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCL 741 (751)
Q Consensus 676 li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l~ 741 (751)
|+++|++|..+| ...+..+++.+ ...+++++++++|.+...... .++++.+.+||++++.
T Consensus 213 lii~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVP--VEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSC--THHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCC--hHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999998 88887776544 356899999999998755443 7899999999999874
No 66
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.84 E-value=5.4e-20 Score=188.61 Aligned_cols=234 Identities=17% Similarity=0.093 Sum_probs=160.8
Q ss_pred CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeE
Q 004475 478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 556 (751)
Q Consensus 478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~ 556 (751)
....+.+.++..++ .+.+++|.|.+ .++.|+||++|||||..++ ...+ ...+..|+. .||.
T Consensus 48 ~~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~ 109 (313)
T 2wir_A 48 IHRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVLGS--------VETH----DHVCRRLANLSGAV 109 (313)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHCCE
T ss_pred CceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccCCC--------hHHH----HHHHHHHHHHcCCE
Confidence 34678899988776 89999999975 2347999999998754322 1222 244566776 4999
Q ss_pred EEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEE
Q 004475 557 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCG 629 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~ 629 (751)
|++++ ++|.|.+.. ....+|+..+++|+.+.. .+|+++|+++|+|+||.+|+.++.+.|++ ++++
T Consensus 110 v~~~d---~rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 181 (313)
T 2wir_A 110 VVSVD---YRLAPEHKF-----PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQ 181 (313)
T ss_dssp EEEEE---CCCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEee---cCCCCCCCC-----CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEE
Confidence 99954 456665432 234678888888888752 36777999999999999999999988776 9999
Q ss_pred EEccCCCC-CCCCccCcccc---cccchh--hH----HHH---------HhcCcccccCCCCCCEEEEEcCCCCCCCCCh
Q 004475 630 IARSGSYN-KTLTPFGFQTE---FRTLWE--AT----NVY---------IEMSPITHANKIKKPILIIHGEVDDKVGLFP 690 (751)
Q Consensus 630 v~~~~~~d-~~~~~~~~~~~---~~~~~~--~~----~~~---------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~ 690 (751)
|+++|..+ ........... ....+. .. ..| ...+++...-+..+|+|++||+.|.++
T Consensus 182 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~---- 257 (313)
T 2wir_A 182 VLIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR---- 257 (313)
T ss_dssp EEESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH----
T ss_pred EEEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh----
Confidence 99999877 22111000000 000000 00 001 011333111112359999999999974
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHhc
Q 004475 691 MQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 691 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 741 (751)
..+..++++++..+.+++++++++++|.+... +...++.+.+.+||.++++
T Consensus 258 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 258 DEGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 56778999999999999999999999998632 3346788899999988764
No 67
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.84 E-value=3.2e-19 Score=178.63 Aligned_cols=228 Identities=17% Similarity=0.134 Sum_probs=161.1
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
..+.+.+. .+|..+.++++.|.+ .+.|+||++||.+.. ........+...|+++||.|++
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~-------------~~~~~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTAN-------------RNTSLLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCC-------------TTCHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCC-------------ccccHHHHHHHHHHhCCcEEEE
Confidence 45666665 578899999999864 137999999997521 0111122456678889999999
Q ss_pred cCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004475 560 GPSIPIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 637 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d 637 (751)
++.+|+|.+.... .......+|+.+++++++++..+ ++|+++|||+||.+|+.++.++|++++++|+++|...
T Consensus 81 ---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 81 ---FDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155 (270)
T ss_dssp ---ECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTH
T ss_pred ---EccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccc
Confidence 5556777664432 23567789999999999876433 5899999999999999999999999999999998754
Q ss_pred CCC------------CccCccccc-----ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475 638 KTL------------TPFGFQTEF-----RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 700 (751)
Q Consensus 638 ~~~------------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l 700 (751)
... .+....... .........+........+.++++|+|+++|++|..+| ...+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~ 233 (270)
T 3pfb_A 156 LKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIY 233 (270)
T ss_dssp HHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHC
T ss_pred cchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 110 000000000 00001122334445556678899999999999999998 88888777664
Q ss_pred HhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 701 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 701 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
..++++++++++|.+. .+....+.+.+.+||.++
T Consensus 234 ----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 234 ----QNSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp ----SSEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred ----CCCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 3579999999999976 556778888899998764
No 68
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.84 E-value=7.6e-20 Score=187.92 Aligned_cols=230 Identities=14% Similarity=0.128 Sum_probs=153.2
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCe
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 555 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 555 (751)
..+..+.+.+ ++..+ +.|++. ....|+||++|||||..++. ..+ ...+..|+. .||
T Consensus 56 ~~~~~~~~~~---~g~~~----~~p~~~----~~~~~~vv~~HGgg~~~g~~--------~~~----~~~~~~la~~~g~ 112 (322)
T 3k6k_A 56 EGVELTLTDL---GGVPC----IRQATD----GAGAAHILYFHGGGYISGSP--------STH----LVLTTQLAKQSSA 112 (322)
T ss_dssp TTCEEEEEEE---TTEEE----EEEECT----TCCSCEEEEECCSTTTSCCH--------HHH----HHHHHHHHHHHTC
T ss_pred CCceEEEEEE---CCEeE----EecCCC----CCCCeEEEEEcCCcccCCCh--------HHH----HHHHHHHHHhcCC
Confidence 3445555554 45444 456541 11234499999998643221 111 134456665 499
Q ss_pred EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 004475 556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 631 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~ 631 (751)
+|++++++ +.++.. ....++|+.++++|+.++ .+|+++|+|+|+|+||++|+.++.+.|+. ++++|+
T Consensus 113 ~v~~~dyr---~~~~~~-----~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 183 (322)
T 3k6k_A 113 TLWSLDYR---LAPENP-----FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVM 183 (322)
T ss_dssp EEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred EEEEeeCC---CCCCCC-----CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 99996664 433321 235578999999999987 46889999999999999999999987665 899999
Q ss_pred ccCCCCCCCCccCcccc-cccch---hh----HHHHH--------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHH
Q 004475 632 RSGSYNKTLTPFGFQTE-FRTLW---EA----TNVYI--------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 695 (751)
Q Consensus 632 ~~~~~d~~~~~~~~~~~-~~~~~---~~----~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~ 695 (751)
++|..+........... ...++ .. ...|. ..+|+.......+|+||+||+.|.+ ..++..
T Consensus 184 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~ 259 (322)
T 3k6k_A 184 LSPFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTT 259 (322)
T ss_dssp ESCCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHH
T ss_pred ecCCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHH
Confidence 99988754322111000 00000 00 01111 1233332223347999999999987 567889
Q ss_pred HHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHhcC
Q 004475 696 FFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 696 ~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~ 742 (751)
++++|++.|.++++++||+++|.+... +...++++.+.+||.+++..
T Consensus 260 ~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (322)
T 3k6k_A 260 LAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISK 310 (322)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998643 33568899999999999875
No 69
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.83 E-value=7.5e-19 Score=175.61 Aligned_cols=221 Identities=16% Similarity=0.166 Sum_probs=150.9
Q ss_pred CceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCC---CchHHHHHHhC-
Q 004475 479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLAR- 553 (751)
Q Consensus 479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 553 (751)
-..+.+.+.+. .+..+.+.+|+|+++.+. +++|+||++||++... ..+... .......|+++
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~--~~~P~vv~lHG~g~~~-----------~~~~~~~~~~~~~~~~l~~~g 96 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPGYSKD--KKYSVLYLLHGIGGSE-----------NDWFEGGGRANVIADNLIAEG 96 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCCTT--SCBCEEEEECCTTCCT-----------TTTTTTTTCHHHHHHHHHHTT
T ss_pred ceEEEEEEeccccCCceEEEEEeCCCCCCC--CCccEEEEECCCCCCc-----------chhhhccccHHHHHHHHHHcC
Confidence 34677777764 467899999999886543 3599999999976221 112111 11234566665
Q ss_pred ---CeEEEEcCCCCCCCCCCCCCCchhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004475 554 ---RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSS-AEAAVEEVVRRGVA--DPSRIAVGGHSYGAFMTAHLLAHAPHLFC 627 (751)
Q Consensus 554 ---G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d-~~~~v~~l~~~~~i--d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 627 (751)
||+|+.++++ +.+... ...+ ....++ +.++++++.++..+ |+++|+|+||||||++|+.++.++|+.++
T Consensus 97 ~~~~~~vv~~d~~---~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 171 (268)
T 1jjf_A 97 KIKPLIIVTPNTN---AAGPGI-ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFA 171 (268)
T ss_dssp SSCCCEEEEECCC---CCCTTC-SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCS
T ss_pred CCCCEEEEEeCCC---CCCccc-cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhh
Confidence 5999996654 332221 1222 222333 55677888766544 78999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCC-CEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCc
Q 004475 628 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 706 (751)
Q Consensus 628 ~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~ 706 (751)
++++++|..+..... ..+.... .....+. |+|++||+.|.++| . ++++++.|++.+.+
T Consensus 172 ~~v~~s~~~~~~~~~--------~~~~~~~---------~~~~~~~pp~li~~G~~D~~v~--~--~~~~~~~l~~~g~~ 230 (268)
T 1jjf_A 172 YIGPISAAPNTYPNE--------RLFPDGG---------KAAREKLKLLFIACGTNDSLIG--F--GQRVHEYCVANNIN 230 (268)
T ss_dssp EEEEESCCTTSCCHH--------HHCTTTT---------HHHHHHCSEEEEEEETTCTTHH--H--HHHHHHHHHHTTCC
T ss_pred heEEeCCCCCCCchh--------hhcCcch---------hhhhhcCceEEEEecCCCCCcc--H--HHHHHHHHHHCCCc
Confidence 999999975532100 0000000 0011234 49999999999875 3 67899999999999
Q ss_pred EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 707 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 707 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++++++++++|.+.. ....+..+++||.++..
T Consensus 231 ~~~~~~~g~~H~~~~---~~~~~~~~~~~l~~~~~ 262 (268)
T 1jjf_A 231 HVYWLIQGGGHDFNV---WKPGLWNFLQMADEAGL 262 (268)
T ss_dssp CEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred eEEEEcCCCCcCHhH---HHHHHHHHHHHHHhcCc
Confidence 999999999998742 44667888999988744
No 70
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.83 E-value=3.2e-19 Score=177.69 Aligned_cols=205 Identities=15% Similarity=0.147 Sum_probs=154.1
Q ss_pred CceEEEEEEcC--CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 479 LQKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 479 ~~~e~i~~~~~--~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
+..+.+.++.. ++ ...+.+++|.... +++.|+||++||.+.. ... ...+...|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~-~~~~~l~~p~~~~---~~~~p~vv~~HG~~~~-----------~~~----~~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASG-FGGGTIYYPTSTA---DGTFGAVVISPGFTAY-----------QSS----IAWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSS-SCCEEEEEESCCT---TCCEEEEEEECCTTCC-----------GGG----TTTHHHHHHTTTCE
T ss_pred CCccceEecceeccC-CCceeEEecCCCC---CCCCCEEEEeCCcCCC-----------chh----HHHHHHHHHhCCCE
Confidence 45666777654 22 2357788886521 2358999999996411 111 12456678899999
Q ss_pred EEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEc
Q 004475 557 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 632 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~----~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 632 (751)
|+++ +++|+|.+ ......|+..+++++.+ ...++.++|+++||||||.+|+.++.++|+ ++++|++
T Consensus 84 v~~~---d~~g~g~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTI---DTNTTLDQ------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEE---CCSSTTCC------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEe---CCCCCCCC------CchhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 9994 44566543 23345788899999987 344677899999999999999999999987 8999998
Q ss_pred cCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHH-HHHHHHHHHhCCCcEEEEE
Q 004475 633 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVL 711 (751)
Q Consensus 633 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~-~~~~~~~l~~~~~~~~~~~ 711 (751)
+|... ...+.++++|+|+++|++|..+| ... ++++++.+. .+.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~-~~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLP-GSLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSC-TTSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhh-cCCCceEEE
Confidence 88532 12345678999999999999998 887 999998884 346789999
Q ss_pred eCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 712 LPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 712 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
+++++|.+.. +....+.+.+.+||++++...
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCc
Confidence 9999999863 345788999999999998753
No 71
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.83 E-value=5.5e-20 Score=175.14 Aligned_cols=184 Identities=14% Similarity=0.091 Sum_probs=126.8
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC-----CchhHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP-----NDRFVEQLVSSA 585 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~-----~~~~~~~~~~d~ 585 (751)
..|+||++||.|.. ...+. .+...|...|+.|++++..+...++.... .........+.+
T Consensus 21 a~~~Vv~lHG~G~~-----------~~~~~----~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i 85 (210)
T 4h0c_A 21 AKKAVVMLHGRGGT-----------AADII----SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV 85 (210)
T ss_dssp CSEEEEEECCTTCC-----------HHHHH----GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH
T ss_pred CCcEEEEEeCCCCC-----------HHHHH----HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH
Confidence 46899999996411 11111 12334456899999976543332222211 111233334445
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcc
Q 004475 586 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI 665 (751)
Q Consensus 586 ~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (751)
..+++.+.+. .+|++||+++|+|+||++|+.+++++|++++++|++++........ ...
T Consensus 86 ~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~---~~~----------------- 144 (210)
T 4h0c_A 86 GEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA---IGN----------------- 144 (210)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC---GGG-----------------
T ss_pred HHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh---hhh-----------------
Confidence 5555555554 4899999999999999999999999999999999999864211100 000
Q ss_pred cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 666 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 666 ~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
......++|+|++||++|++|| +..++++++.|++.|.++++++||+.+|.+.. +.++.+.+||.
T Consensus 145 ~~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 145 YKGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp CCBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred hhhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 0011235899999999999999 99999999999999999999999999999852 34566777764
No 72
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.83 E-value=8.5e-20 Score=186.98 Aligned_cols=233 Identities=18% Similarity=0.142 Sum_probs=158.9
Q ss_pred CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-CeE
Q 004475 478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFA 556 (751)
Q Consensus 478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~ 556 (751)
....+.++++..++ .+.+.+|.|.+ ..+.|+||++||+||..++ ...+ ......|+.+ ||.
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~ 106 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVFGS--------IETH----DHICRRLSRLSDSV 106 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHTCE
T ss_pred cceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccCCC--------hhhh----HHHHHHHHHhcCCE
Confidence 35678899987776 89999999975 2247999999998753321 1222 2345567765 999
Q ss_pred EEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEE
Q 004475 557 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCG 629 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~ 629 (751)
|++++ ++|+|.+.. ....+|+..+++++.+.. .+|+++|+|+|||+||++|+.++.++|+ .++++
T Consensus 107 v~~~d---~rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 178 (311)
T 2c7b_A 107 VVSVD---YRLAPEYKF-----PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQ 178 (311)
T ss_dssp EEEEC---CCCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEE
T ss_pred EEEec---CCCCCCCCC-----CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeE
Confidence 99954 456655422 235678889999988752 3677899999999999999999988765 48999
Q ss_pred EEccCCCCCCCCcc----Ccccccccchh--hH----HHH---------HhcCccc-ccCCCCCCEEEEEcCCCCCCCCC
Q 004475 630 IARSGSYNKTLTPF----GFQTEFRTLWE--AT----NVY---------IEMSPIT-HANKIKKPILIIHGEVDDKVGLF 689 (751)
Q Consensus 630 v~~~~~~d~~~~~~----~~~~~~~~~~~--~~----~~~---------~~~~~~~-~~~~~~~P~li~~G~~D~~vp~~ 689 (751)
|+.+|..+...... .+.......+. .. ..| ...++.. .+..+ +|+|+++|+.|.+++
T Consensus 179 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~-- 255 (311)
T 2c7b_A 179 VLIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRD-- 255 (311)
T ss_dssp EEESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--
T ss_pred EEECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCchH--
Confidence 99999877311000 00000000000 00 001 0112221 12333 499999999999853
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc----cccHHHHHHHHHHHHHHHhc
Q 004475 690 PMQAERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 690 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 741 (751)
....+.+.+...+.+++++++++++|.+.. .+...++.+.+.+||.+++.
T Consensus 256 --~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 256 --EGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 456788888889999999999999999863 23456788999999999875
No 73
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.83 E-value=1.2e-19 Score=201.79 Aligned_cols=245 Identities=16% Similarity=0.214 Sum_probs=169.5
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHH---HHHHhCCe
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS---LIFLARRF 555 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~ 555 (751)
+..+.+.++..+|..+.++++.|.+. +++|+||++||.+... ...+.....+..... ..|+++||
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~-------~~~~~~~~~~~~~~~~~~~~la~~Gy 90 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASG-------RTERLASPHMKDLLSAGDDVFVEGGY 90 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH-------HTCSSCCSSHHHHSCGGGHHHHHTTC
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCcc-------ccccccccccccccchhHHHHHhCCe
Confidence 45678899989999999999999762 3589999999864210 000000000000111 67899999
Q ss_pred EEEEcCCCCCCCCCCCCCCc-h-------hHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004475 556 AVLAGPSIPIIGEGDKLPND-R-------FVE---QLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAP 623 (751)
Q Consensus 556 ~v~~~~~~~~~g~g~~~~~~-~-------~~~---~~~~d~~~~v~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~p 623 (751)
+|+.+|.+ |+|.+.... . +.. ...+|+.++++||.++ ++.| .||+++|+||||++++.+++..|
T Consensus 91 ~Vv~~D~R---G~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~ 166 (615)
T 1mpx_A 91 IRVFQDVR---GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPH 166 (615)
T ss_dssp EEEEEECT---TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCC
T ss_pred EEEEECCC---CCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCC
Confidence 99995554 544432211 1 111 5689999999999998 7766 59999999999999999999888
Q ss_pred CceeEEEEccCCCCCCC-Ccc---Cccccc----------------------cc------------------------ch
Q 004475 624 HLFCCGIARSGSYNKTL-TPF---GFQTEF----------------------RT------------------------LW 653 (751)
Q Consensus 624 ~~~~~~v~~~~~~d~~~-~~~---~~~~~~----------------------~~------------------------~~ 653 (751)
+.++++|+.+++.+... ..+ +..... .. .|
T Consensus 167 ~~l~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 246 (615)
T 1mpx_A 167 PALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWW 246 (615)
T ss_dssp TTEEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHH
T ss_pred CceEEEEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHH
Confidence 99999999999988322 111 000000 00 01
Q ss_pred h-------hHHHHHhcCcccccCC--CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC---cEEEEEeCCCCCcCCc
Q 004475 654 E-------ATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA---LSRLVLLPFEHHVYAA 721 (751)
Q Consensus 654 ~-------~~~~~~~~~~~~~~~~--~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~~~ 721 (751)
. ..+.|...++..++++ |++|+|++||..|.. + ..++.+++++|++.+. +.++++.|. +|....
T Consensus 247 ~~~~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~ 322 (615)
T 1mpx_A 247 HKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVN 322 (615)
T ss_dssp HHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGG
T ss_pred HHHHhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCcc
Confidence 1 0133456688888999 999999999999997 7 7889999999998764 489999998 587521
Q ss_pred -----c-------ccH-HHHHHHHHHHHHHHhcCC
Q 004475 722 -----R-------ENV-MHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 722 -----~-------~~~-~~~~~~~~~fl~~~l~~~ 743 (751)
. +.. ....+.+++||+++|+..
T Consensus 323 ~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 323 YDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp SCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred ccccccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 0 111 223577899999999854
No 74
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.83 E-value=1.2e-19 Score=181.07 Aligned_cols=241 Identities=12% Similarity=-0.025 Sum_probs=154.7
Q ss_pred CceEEEEEEcC-CCceEEEEEEcCCCCCC--CCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH-HhCC
Q 004475 479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQ--SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR 554 (751)
Q Consensus 479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~--~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 554 (751)
+..+.+++.+. .+..+.+.+|+|++.+. .+++++|+||++||++.. ...+... .....+ ...|
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~-----------~~~~~~~--~~~~~~~~~~~ 71 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN-----------HNSWLKR--TNVERLLRGTN 71 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCC-----------TTHHHHH--SCHHHHTTTCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC-----------HHHHHhc--cCHHHHHhcCC
Confidence 55677777754 56789999999987521 123458999999997521 1111110 012333 3579
Q ss_pred eEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475 555 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 634 (751)
Q Consensus 555 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 634 (751)
++|+.+++. ..++........+.....+|+...++.+..+..+|+++|+++|||+||++|+.++. +|++++++|+++|
T Consensus 72 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~ 149 (263)
T 2uz0_A 72 LIVVMPNTS-NGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSG 149 (263)
T ss_dssp CEEEECCCT-TSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESC
T ss_pred eEEEEECCC-CCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecC
Confidence 999985542 22222211123344555667766666654423467889999999999999999999 9899999999999
Q ss_pred CCCCCCCccCcccccccc-----hh--hHHHHHhcCcccccCCCC--CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC
Q 004475 635 SYNKTLTPFGFQTEFRTL-----WE--ATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 705 (751)
Q Consensus 635 ~~d~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~--~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~ 705 (751)
..+............... +. ....+...++...+.+++ +|+|++||++|.+++ .++++++++++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~----~~~~~~~~l~~~g~ 225 (263)
T 2uz0_A 150 ALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE----ANNLAVKNLKKLGF 225 (263)
T ss_dssp CCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH----HHHHHHHHHHHTTC
T ss_pred CcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH----HHHHHHHHHHHCCC
Confidence 876543211000000000 00 001122234444455554 899999999999853 46889999999999
Q ss_pred cEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 706 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 706 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+++++++++ +|.+.. ....+..+++||.++++.
T Consensus 226 ~~~~~~~~g-~H~~~~---~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 226 DVTYSHSAG-THEWYY---WEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp EEEEEEESC-CSSHHH---HHHHHHHHHHHSSSCCCC
T ss_pred CeEEEECCC-CcCHHH---HHHHHHHHHHHHHhhccc
Confidence 999999999 998642 346778899999988864
No 75
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.82 E-value=1.7e-19 Score=179.79 Aligned_cols=202 Identities=15% Similarity=0.128 Sum_probs=147.7
Q ss_pred EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475 482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 561 (751)
Q Consensus 482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~ 561 (751)
+...++..++..+...+|.|.+ ++.|+||++|||||..++. ..+ ......|+++||.|++++
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDK--------SSW----SHLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCCG--------GGC----GGGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCCh--------HHH----HHHHHHHHhCCCEEEEeC
Confidence 3444554456677888898865 2379999999987532211 112 234567788999999955
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEccCC
Q 004475 562 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCGIARSGS 635 (751)
Q Consensus 562 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~~~ 635 (751)
+ +|.+. .......+|+.++++++..+.. ++|+|+||||||.+|+.++.++ |++++++|+++|.
T Consensus 101 ~---~~~~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~ 169 (262)
T 2pbl_A 101 Y---ELCPE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 169 (262)
T ss_dssp C---CCTTT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred C---CCCCC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCc
Confidence 5 44433 2356778999999999988753 6899999999999999999887 7899999999998
Q ss_pred CCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475 636 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 715 (751)
Q Consensus 636 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (751)
++.......+. ..........+...++...+.++++|+|+++|++|..+| ..+++.+++.+. +++++++++
T Consensus 170 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~ 240 (262)
T 2pbl_A 170 SDLRPLLRTSM--NEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEK 240 (262)
T ss_dssp CCCGGGGGSTT--HHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTC
T ss_pred cCchHHHhhhh--hhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCC
Confidence 76432111000 001111234455667777788899999999999999998 899999998886 689999999
Q ss_pred CCcCCc
Q 004475 716 HHVYAA 721 (751)
Q Consensus 716 ~H~~~~ 721 (751)
+|....
T Consensus 241 ~H~~~~ 246 (262)
T 2pbl_A 241 HHFNVI 246 (262)
T ss_dssp CTTTTT
T ss_pred CcchHH
Confidence 998753
No 76
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.82 E-value=1.3e-18 Score=177.12 Aligned_cols=228 Identities=16% Similarity=0.155 Sum_probs=159.1
Q ss_pred EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC
Q 004475 485 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 564 (751)
Q Consensus 485 ~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~ 564 (751)
.+...+|..+.++++.|.+ .+.|+||++||.+.. .. ....+...|+++||.|++ ++
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~-----------~~----~~~~~~~~l~~~g~~v~~---~d 76 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEH-----------SG----RYEELARMLMGLDLLVFA---HD 76 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCC-----------GG----GGHHHHHHHHHTTEEEEE---EC
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCch-----------hh----HHHHHHHHHHhCCCcEEE---eC
Confidence 5667789999999998864 236999999997421 11 112456678889999999 55
Q ss_pred CCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475 565 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 641 (751)
Q Consensus 565 ~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~ 641 (751)
.+|+|.+... .......++|+.++++++.... +..+++++|||+||.+|+.++.++|++++++|+++|.......
T Consensus 77 ~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 154 (303)
T 3pe6_A 77 HVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154 (303)
T ss_dssp CTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh
Confidence 6677766432 1234667899999999998763 3568999999999999999999999999999999987542100
Q ss_pred -----------------ccCcccccccch-----hhHHHHHh---------------------cCcccccCCCCCCEEEE
Q 004475 642 -----------------PFGFQTEFRTLW-----EATNVYIE---------------------MSPITHANKIKKPILII 678 (751)
Q Consensus 642 -----------------~~~~~~~~~~~~-----~~~~~~~~---------------------~~~~~~~~~~~~P~li~ 678 (751)
...........+ .....+.. ......+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 234 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLL 234 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEE
T ss_pred ccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 000000000000 00000000 01113467789999999
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc--HHHHHHHHHHHHHHHhcC
Q 004475 679 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN--VMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 679 ~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~~~~fl~~~l~~ 742 (751)
+|++|..+| ...++.+.+.+.. ..++++++++++|.+..... ..+.+..+++||.+++..
T Consensus 235 ~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 235 QGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp EETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 999999998 8888888877642 36899999999999764322 557788899999998864
No 77
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.82 E-value=5.8e-19 Score=170.40 Aligned_cols=187 Identities=19% Similarity=0.129 Sum_probs=139.6
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh--CCeEEEEcCCC----------------CCCCCCCC
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDK 571 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~~~~----------------~~~g~g~~ 571 (751)
.+.|+||++||.+.. ... .......|++ +||.|++++.+ +..|+|.+
T Consensus 12 ~~~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 76 (218)
T 1auo_A 12 PADACVIWLHGLGAD-----------RYD----FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPA 76 (218)
T ss_dssp CCSEEEEEECCTTCC-----------TTT----THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSS
T ss_pred CCCcEEEEEecCCCC-----------hhh----HHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcc
Confidence 357999999997411 111 1245667777 99999996642 44455543
Q ss_pred CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEccCCCCCCCCccCccccc
Q 004475 572 LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEF 649 (751)
Q Consensus 572 ~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~d~~~~~~~~~~~~ 649 (751)
... .....+..+++..+++++.+ ..++.++|+++|||+||.+|+.++. ++|++++++|+++|..... . +...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--~--~~~~- 150 (218)
T 1auo_A 77 RSISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--G--DELE- 150 (218)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--C--TTCC-
T ss_pred cccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc--h--hhhh-
Confidence 222 22345667788888888876 4477889999999999999999999 9999999999999976530 0 0000
Q ss_pred ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475 650 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 729 (751)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (751)
.....+++|+|+++|++|..+| +..++++++.+.+.+.++++++++ ++|.+.. +..
T Consensus 151 ----------------~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~ 206 (218)
T 1auo_A 151 ----------------LSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEI 206 (218)
T ss_dssp ----------------CCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHH
T ss_pred ----------------hhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccCH-----HHH
Confidence 0112457999999999999999 999999999999988899999999 9998753 456
Q ss_pred HHHHHHHHHHhc
Q 004475 730 WETDRWLQKYCL 741 (751)
Q Consensus 730 ~~~~~fl~~~l~ 741 (751)
+.+.+||.++++
T Consensus 207 ~~~~~~l~~~l~ 218 (218)
T 1auo_A 207 HDIGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 789999998763
No 78
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.82 E-value=1.6e-19 Score=184.03 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=147.0
Q ss_pred EEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC
Q 004475 495 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN 574 (751)
Q Consensus 495 ~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~ 574 (751)
.+.+++|... .+.|+||++||.+.. ...+ ..+...|+++||.|+++ +++|+|.+.
T Consensus 84 ~~~~~~p~~~-----~~~p~vv~~HG~~~~-----------~~~~----~~~~~~la~~G~~vv~~---d~~g~g~s~-- 138 (306)
T 3vis_A 84 GGTIYYPREN-----NTYGAIAISPGYTGT-----------QSSI----AWLGERIASHGFVVIAI---DTNTTLDQP-- 138 (306)
T ss_dssp CEEEEEESSC-----SCEEEEEEECCTTCC-----------HHHH----HHHHHHHHTTTEEEEEE---CCSSTTCCH--
T ss_pred ceEEEeeCCC-----CCCCEEEEeCCCcCC-----------HHHH----HHHHHHHHhCCCEEEEe---cCCCCCCCc--
Confidence 4677788652 258999999996411 1111 24566888999999994 455666541
Q ss_pred chhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc
Q 004475 575 DRFVEQLVSSAEAAVEEVVRR------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 648 (751)
Q Consensus 575 ~~~~~~~~~d~~~~v~~l~~~------~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~ 648 (751)
....+|+..+++++.+. ..+|.++|+++|||+||.+++.++.++|+ ++++|+++|....
T Consensus 139 ----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~---------- 203 (306)
T 3vis_A 139 ----DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN---------- 203 (306)
T ss_dssp ----HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC----------
T ss_pred ----chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc----------
Confidence 23457888999999987 66788999999999999999999999986 8999999885431
Q ss_pred cccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChH-HHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHH
Q 004475 649 FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 727 (751)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 727 (751)
..+.++++|+|+++|++|..+| .. +++.+++.+...+ +++++++++++|.+.. +....
T Consensus 204 -----------------~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~-~~~~~ 262 (306)
T 3vis_A 204 -----------------KSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN-ITNKT 262 (306)
T ss_dssp -----------------CCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG-SCCHH
T ss_pred -----------------cccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccchh-hchhH
Confidence 2245678999999999999998 77 6888988887765 8899999999999863 34478
Q ss_pred HHHHHHHHHHHHhcCC
Q 004475 728 VIWETDRWLQKYCLSN 743 (751)
Q Consensus 728 ~~~~~~~fl~~~l~~~ 743 (751)
+.+.+.+||++++...
T Consensus 263 ~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 263 IGMYSVAWLKRFVDED 278 (306)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHccCc
Confidence 8899999999998753
No 79
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.82 E-value=3.2e-19 Score=189.54 Aligned_cols=233 Identities=18% Similarity=0.160 Sum_probs=159.4
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
...+.+.++. ++..+.++++.+. ..+.|+||++||.+. . ...+.......++++||.|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~------~~~~p~vv~~HG~~~-----------~---~~~~~~~~~~~~~~~g~~vi 191 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISE------DKAQDTLIVVGGGDT-----------S---REDLFYMLGYSGWEHDYNVL 191 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCS------SSCCCEEEEECCSSC-----------C---HHHHHHHTHHHHHHTTCEEE
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCC------CCCCCEEEEECCCCC-----------C---HHHHHHHHHHHHHhCCcEEE
Confidence 4567788875 5778999988543 223699999999631 0 11111122235668999999
Q ss_pred EcCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004475 559 AGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 637 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d 637 (751)
+ ++.+|+|.+... ..+..+..+|+..+++++..+. .+|+|+|||+||++|+.++..+| +++++|+.+|..+
T Consensus 192 ~---~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 192 M---VDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263 (405)
T ss_dssp E---ECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC
T ss_pred E---EcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC
Confidence 9 555677765321 1122244778889999987653 68999999999999999999998 8999999999876
Q ss_pred CCCCc-------cCccc----c---------cccchh---------------hHHHHHhcCcccccCCCCCCEEEEEcCC
Q 004475 638 KTLTP-------FGFQT----E---------FRTLWE---------------ATNVYIEMSPITHANKIKKPILIIHGEV 682 (751)
Q Consensus 638 ~~~~~-------~~~~~----~---------~~~~~~---------------~~~~~~~~~~~~~~~~~~~P~li~~G~~ 682 (751)
..... ...+. . ....|. ....+....+...+.++++|+|+++|++
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp HHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETT
T ss_pred HHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCC
Confidence 21100 00000 0 000000 0011222333333678899999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC--CccccHHHHHHHHHHHHHHHhcC
Q 004475 683 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY--AARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 683 D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
|..+| +.++.++++.++..+.+++++++++..|.. ...+....+.+.+.+||+++++.
T Consensus 344 D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 344 EDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp SCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred CcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99998 999999999999988899999996665542 23566788899999999999864
No 80
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=6e-17 Score=171.69 Aligned_cols=270 Identities=14% Similarity=0.059 Sum_probs=182.3
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|++||+.+ ++..... .....+..++|||||++|+++. .....|+++++.+++..+......
T Consensus 11 d~~v~v~d~~~----~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~---------~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 11 SDNISVIDVTS----NKVTATI--PVGSNPMGAVISPDGTKVYVAN---------AHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp TTEEEEEETTT----TEEEEEE--ECSSSEEEEEECTTSSEEEEEE---------GGGTEEEEEETTTTEEEEEEECSS-
T ss_pred CCEEEEEECCC----CeEEEEe--ecCCCcceEEECCCCCEEEEEC---------CCCCeEEEEECCCCeEEEEEECCC-
Confidence 45799999988 8776543 2333578899999999997764 344789999998888665544333
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..++|+|||++|++.... ...|+++|
T Consensus 75 ----~v~~~~~spdg~~l~~~~~~------------------------------------------------~~~v~v~d 102 (391)
T 1l0q_A 75 ----SPQGVAVSPDGKQVYVTNMA------------------------------------------------SSTLSVID 102 (391)
T ss_dssp ----SEEEEEECTTSSEEEEEETT------------------------------------------------TTEEEEEE
T ss_pred ----CccceEECCCCCEEEEEECC------------------------------------------------CCEEEEEE
Confidence 36788999999999887321 04788899
Q ss_pred C-CCCcee-cCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475 164 L-DGTAKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (751)
Q Consensus 164 ~-~G~~~~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (751)
+ +++... +..+..+..++|+|||++|+++... ...|++||+.+++........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~------------- 157 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG------------- 157 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEEecC-------------
Confidence 9 564433 3333667899999999999877543 347999999877654432221
Q ss_pred CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc
Q 004475 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT 320 (751)
Q Consensus 242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~ 320 (751)
..+..+.|+|||+. ++++.. ..+.|+++++. ............... +.|+|||+.|+..... .
T Consensus 158 ~~~~~~~~~~dg~~-l~~~~~-----------~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~ 221 (391)
T 1l0q_A 158 RSPKGIAVTPDGTK-VYVANF-----------DSMSISVIDTV---TNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD-K 221 (391)
T ss_dssp SSEEEEEECTTSSE-EEEEET-----------TTTEEEEEETT---TTEEEEEEECSSEEEEEEECTTSSEEEEEEEC-S
T ss_pred CCcceEEECCCCCE-EEEEeC-----------CCCEEEEEECC---CCeEEEEEecCCCccceEECCCCCEEEEEecC-c
Confidence 22457899999998 555431 22579999985 333333333444556 8999999998877631 1
Q ss_pred cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEe
Q 004475 321 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 400 (751)
Q Consensus 321 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 400 (751)
....|+++++.++ +.......... ... ++|+|||+.|++... ....|++||
T Consensus 222 ~~~~v~~~d~~~~--~~~~~~~~~~~-~~~------~~~s~dg~~l~~s~~--------------------~d~~v~v~d 272 (391)
T 1l0q_A 222 YFNTVSMIDTGTN--KITARIPVGPD-PAG------IAVTPDGKKVYVALS--------------------FXNTVSVID 272 (391)
T ss_dssp SCCEEEEEETTTT--EEEEEEECCSS-EEE------EEECTTSSEEEEEET--------------------TTTEEEEEE
T ss_pred CCCcEEEEECCCC--eEEEEEecCCC-ccE------EEEccCCCEEEEEcC--------------------CCCEEEEEE
Confidence 3467888998874 22222222111 111 789999998877651 224789999
Q ss_pred cCCCceeEEee
Q 004475 401 INTGSKERIWE 411 (751)
Q Consensus 401 ~~~g~~~~l~~ 411 (751)
+.+++....+.
T Consensus 273 ~~~~~~~~~~~ 283 (391)
T 1l0q_A 273 TATNTITATMA 283 (391)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99887765543
No 81
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.81 E-value=7.9e-19 Score=171.30 Aligned_cols=198 Identities=14% Similarity=0.104 Sum_probs=144.2
Q ss_pred EEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC--------------
Q 004475 498 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-------------- 563 (751)
Q Consensus 498 ~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~-------------- 563 (751)
++.|+. +.+.|+||++||.+.. ...+ ......|+++||.|++++.+
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDT-----------GHGW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSC-----------HHHH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCc-----------cchH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 456654 2357999999997521 0111 12334455579999996432
Q ss_pred --CCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004475 564 --PIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 564 --~~~g~g~~~~-~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~ 640 (751)
+.+|+..... .........+++.++++++.+ ..+|+++|+++|||+||.+|+.++.++|++++++|+++|..+...
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 4455522111 223355677888888888877 557778999999999999999999999999999999999754321
Q ss_pred CccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCc--EEEEEeCCCCCc
Q 004475 641 TPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVLLPFEHHV 718 (751)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~H~ 718 (751)
. .. .....+.++++|+|+++|++|..+| ...++++++.+.+.+.+ ++++++++++|.
T Consensus 153 ~---~~----------------~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 S---FP----------------QGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp G---SC----------------SSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred c---cc----------------ccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 0 00 0112345678999999999999998 99999999999887754 999999999999
Q ss_pred CCccccHHHHHHHHHHHHHHHhcC
Q 004475 719 YAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 719 ~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+. .+..+.+.+||.+++..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCC
T ss_pred cC-----HHHHHHHHHHHHHhcCC
Confidence 73 24558999999999864
No 82
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.81 E-value=3e-19 Score=199.17 Aligned_cols=251 Identities=15% Similarity=0.139 Sum_probs=171.0
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHH-HHHHhCCeEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAV 557 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~v 557 (751)
+..+.+.++..+|..|.+++|.|.+. +++|+||++||.+...... .......+.. ..... ..|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~~~~---~~~~~~~~~~-~~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKGRAN---RVPNALTMRE-VLPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHHTC---SSTTCSSHHH-HSCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCcccc---cccccccccc-cccchHHHHHhCCCEE
Confidence 45688899999999999999999762 3589999999854211000 0000000000 00112 7789999999
Q ss_pred EEcCCCCCCCCCCCCCCc-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475 558 LAGPSIPIIGEGDKLPND-----RFV---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 628 (751)
Q Consensus 558 ~~~~~~~~~g~g~~~~~~-----~~~---~~~~~d~~~~v~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 628 (751)
+.+|+++..+++...... .+. ....+|+.++++||.++ +++| .||+++|+||||++++.+++..|+.+++
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 995555443333321111 011 15689999999999998 7777 5999999999999999999988899999
Q ss_pred EEEccCCCCCCC-Ccc---Cccccc----------------------ccc------------------------hhh---
Q 004475 629 GIARSGSYNKTL-TPF---GFQTEF----------------------RTL------------------------WEA--- 655 (751)
Q Consensus 629 ~v~~~~~~d~~~-~~~---~~~~~~----------------------~~~------------------------~~~--- 655 (751)
+|+.+++.|... ..+ +..... ... |..
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999887532 110 000000 000 000
Q ss_pred ----HHHHHhcCcccccCC--CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC--CcEEEEEeCCCCCcCCc-----c
Q 004475 656 ----TNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAA-----R 722 (751)
Q Consensus 656 ----~~~~~~~~~~~~~~~--~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~-----~ 722 (751)
.+.|...++..++++ |++|+|++||..|.. + ..++.+++++|+..+ .+.++++.|. +|.... .
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 123455678888889 999999999999997 6 678899999999988 8889999988 687521 0
Q ss_pred ------cc--HHHHHHHHHHHHHHHhcCC
Q 004475 723 ------EN--VMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 723 ------~~--~~~~~~~~~~fl~~~l~~~ 743 (751)
.. .....+.+++||+++|+..
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 11 1233678899999999854
No 83
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.81 E-value=4.4e-20 Score=186.33 Aligned_cols=236 Identities=13% Similarity=0.130 Sum_probs=150.0
Q ss_pred eEEEEEEc-CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 481 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~-~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
.+.+++.+ ..+..+.+.+|+|+++. .+++|+||++||++... ..+... ......++++||+|++
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~-----------~~~~~~-~~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTE-----------QNFITK-SGFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCS-----------HHHHHH-SCTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCc-----------cchhhc-ccHHHHHhhCCeEEEE
Confidence 34444444 35678999999998764 33599999999975321 111100 0124455678999999
Q ss_pred cCCCCCC------------CCCCCCC----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 004475 560 GPSIPII------------GEGDKLP----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 617 (751)
Q Consensus 560 ~~~~~~~------------g~g~~~~----------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~ 617 (751)
++.. .+ |.|.+.. ...+.....+++ +.++.+... +.++|+|+||||||++|+.
T Consensus 87 ~d~~-~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~-~~~~~~l~G~S~GG~~a~~ 161 (283)
T 4b6g_A 87 PDTS-PRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNEL---PRLIEKHFP-TNGKRSIMGHSMGGHGALV 161 (283)
T ss_dssp ECSS-CCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHH---HHHHHHHSC-EEEEEEEEEETHHHHHHHH
T ss_pred eccc-cccccccccccccccCCCcccccCccCcccchhhHHHHHHHHH---HHHHHHhCC-CCCCeEEEEEChhHHHHHH
Confidence 6642 11 2121100 001123333433 444444422 3579999999999999999
Q ss_pred HHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCC--CCCEEEEEcCCCCCCCCChHH-HH
Q 004475 618 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQ-AE 694 (751)
Q Consensus 618 ~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~li~~G~~D~~vp~~~~~-~~ 694 (751)
++.++|++|+++++++|..+....++...............+...++...+.++ .+|+|++||+.|.+++ ... ++
T Consensus 162 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~~ 239 (283)
T 4b6g_A 162 LALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRTE 239 (283)
T ss_dssp HHHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCHH
T ss_pred HHHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhHH
Confidence 999999999999999998764322211000000000011122333444433333 4699999999999986 422 78
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 695 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 695 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+++++|++.+.+++++++|+++|.+.. +...+..+++|+.++|+
T Consensus 240 ~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 240 DFIETCRAANQPVDVRFHKGYDHSYYF---IASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHHTCCCEEEEETTCCSSHHH---HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCceEEEeCCCCcCHhH---HHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998643 55677888999988763
No 84
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.81 E-value=3.9e-19 Score=185.65 Aligned_cols=238 Identities=13% Similarity=0.011 Sum_probs=160.2
Q ss_pred CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475 478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 557 (751)
Q Consensus 478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 557 (751)
.+..+.+.+...++..+.+.+|.|.... .++|+||++|||||..++. .. .........|+++||+|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~~----~~~p~vv~iHGgg~~~g~~--------~~--~~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGVE----GVLPGLVYTHGGGMTILTT--------DN--RVHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCC----SCEEEEEEECCSTTTSSCS--------SS--HHHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCCC----CCCeEEEEEcCCccccCCC--------cc--cchhHHHHHHHhCCCEE
Confidence 3566778888878778999999997621 2589999999987543221 10 01123456778899999
Q ss_pred EEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-----CCCceeEE
Q 004475 558 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-----APHLFCCG 629 (751)
Q Consensus 558 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~-----~p~~~~~~ 629 (751)
++++++ |.|.+.. ........+|+..+++|+.+.. .+| +|+|+|||+||.+|+.++.. .|++++++
T Consensus 145 v~~d~r---~~gg~~~-~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFR---NAWTAEG-HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECC---CSEETTE-ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecC---CCCCCCC-CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 996665 4322111 1112345688999999998752 234 99999999999999999988 77789999
Q ss_pred EEccCCCCCCCC---------ccCcccccccchhh--H----HHHH---------hcCcc----cccCCCCCCEEEEEcC
Q 004475 630 IARSGSYNKTLT---------PFGFQTEFRTLWEA--T----NVYI---------EMSPI----THANKIKKPILIIHGE 681 (751)
Q Consensus 630 v~~~~~~d~~~~---------~~~~~~~~~~~~~~--~----~~~~---------~~~~~----~~~~~~~~P~li~~G~ 681 (751)
|+++|..+.... ...+.......+.. . ..+. ..++. ..+.++. |+|++||+
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~ 297 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNE 297 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEET
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcC
Confidence 999998775110 00000000000000 0 0010 11222 2234555 99999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC-cc----ccH-HHHHHHHHHHHHHHh
Q 004475 682 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA-AR----ENV-MHVIWETDRWLQKYC 740 (751)
Q Consensus 682 ~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~~~~fl~~~l 740 (751)
+|.++ .++..+++++.+.+.+++++++++++|.+. .. +.. .++.+.+.+||+++.
T Consensus 298 ~D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99985 377889999999999999999999999876 22 333 678889999998764
No 85
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.81 E-value=1.1e-18 Score=170.82 Aligned_cols=208 Identities=17% Similarity=0.124 Sum_probs=149.9
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 573 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~ 573 (751)
+..+++.|.+ +.|+||++||.+.. ...+. .....|+++||.|++ .+.+|+|.+..
T Consensus 13 ~~~~~~~~~~-------~~~~vv~~hG~~~~-----------~~~~~----~~~~~l~~~G~~v~~---~d~~g~g~s~~ 67 (238)
T 1ufo_A 13 LSVLARIPEA-------PKALLLALHGLQGS-----------KEHIL----ALLPGYAERGFLLLA---FDAPRHGEREG 67 (238)
T ss_dssp EEEEEEEESS-------CCEEEEEECCTTCC-----------HHHHH----HTSTTTGGGTEEEEE---CCCTTSTTSSC
T ss_pred EEEEEEecCC-------CccEEEEECCCccc-----------chHHH----HHHHHHHhCCCEEEE---ecCCCCccCCC
Confidence 5666777764 36999999997521 11111 223355778999999 45556665533
Q ss_pred Cc---h----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004475 574 ND---R----------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 574 ~~---~----------~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~ 640 (751)
.. . ......+|+.++++++.+... .+++++|||+||.+|+.++.++|+.++++++.++......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 144 (238)
T 1ufo_A 68 PPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL 144 (238)
T ss_dssp CCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC
T ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh
Confidence 21 1 245668899999999987653 7899999999999999999999988888888877543221
Q ss_pred CccCcccccccchhhHHHHHhcCcccccCCC-CCCEEEEEcCCCCCCCCChHHHHHHHHHHH-hCCC-cEEEEEeCCCCC
Q 004475 641 TPFGFQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALK-GHGA-LSRLVLLPFEHH 717 (751)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~li~~G~~D~~vp~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~H 717 (751)
....+ ..+ .....+...++...+.++ ++|+|+++|++|..+| ...++++++.+. ..+. +++++++++++|
T Consensus 145 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 217 (238)
T 1ufo_A 145 PQGQV----VED-PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLARFVEEGAGH 217 (238)
T ss_dssp CTTCC----CCC-HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEEEEEETTCCS
T ss_pred hhhhc----cCC-cccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceEEEEeCCCCc
Confidence 11110 000 013344555666667777 8999999999999998 999999999998 7776 899999999999
Q ss_pred cCCccccHHHHHHHHHHHHHHHhc
Q 004475 718 VYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 718 ~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.+.. +..+.+.+||.+++.
T Consensus 218 ~~~~-----~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 218 TLTP-----LMARVGLAFLEHWLE 236 (238)
T ss_dssp SCCH-----HHHHHHHHHHHHHHH
T ss_pred ccHH-----HHHHHHHHHHHHHHh
Confidence 8753 456788899998875
No 86
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=5.8e-18 Score=171.55 Aligned_cols=269 Identities=14% Similarity=0.127 Sum_probs=180.4
Q ss_pred CCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 59 ~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.....|+++++.+++.+++..... .+..++|||||++|++...
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~~-------------------------------- 61 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPE-----LFEAPNWSPDGKYLLLNSE-------------------------------- 61 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESS-----CCEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCc-----ceEeeEECCCCCEEEEEcC--------------------------------
Confidence 456899999999998887765433 3678999999999998732
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-C-CCceecCCC---ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D-GTAKDFGTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~-G~~~~lt~~---~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
..|+++++ + ++..++... ..+..++|||||++|++...... ....||.
T Consensus 62 ------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------~~~~l~~ 114 (297)
T 2ojh_A 62 ------------------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---------GKSAIYL 114 (297)
T ss_dssp ------------------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---------SSCEEEE
T ss_pred ------------------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---------CcceEEE
Confidence 47899999 6 666666543 45668999999999999864321 1357899
Q ss_pred EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (751)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (751)
++.+++..+.+.... .+..+.|+|||+. |+++...+ ....||.++++ ++....
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~-l~~~~~~~---------~~~~l~~~~~~---~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKS-FTYCGIRD---------QVFDIYSMDID---SGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSE-EEEEEEET---------TEEEEEEEETT---TCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCE-EEEEECCC---------CceEEEEEECC---CCcceE
Confidence 998877666553321 1346799999998 66544221 12367777765 455666
Q ss_pred eEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeee
Q 004475 294 LHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 372 (751)
Q Consensus 294 l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~ 372 (751)
+......+. +.|+|||+.|++.... .....||.++..++ ..+.+..... .... ++|+|||++|++.+.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~i~~~~~~~~--~~~~~~~~~~-~~~~------~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSR-TGQMQIWRVRVDGS--SVERITDSAY-GDWF------PHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECT-TSSCEEEEEETTSS--CEEECCCCSE-EEEE------EEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecC-CCCccEEEECCCCC--CcEEEecCCc-ccCC------eEECCCCCEEEEEEcC
Confidence 666666677 9999999999887643 23568999987763 3444443221 1112 7899999999998843
Q ss_pred cCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecC
Q 004475 373 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 447 (751)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 447 (751)
.... .........|++||+++++...+...... ......++|||||+.|++.....
T Consensus 238 ~~~~----------~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVF----------DHPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCC----------SCCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCC----------cccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 2000 00001234799999998887666542110 11123368999999999886543
No 87
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.81 E-value=9.6e-19 Score=174.09 Aligned_cols=188 Identities=15% Similarity=0.095 Sum_probs=133.9
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh--CCeEEEEcCCC---CCCCCCCCCCC--------ch
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI---PIIGEGDKLPN--------DR 576 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~~~~---~~~g~g~~~~~--------~~ 576 (751)
.+.|+||++||.|. +...+. .+...|+. .++.+++++.. ...|.|..... ..
T Consensus 64 ~~~plVI~LHG~G~-----------~~~~~~----~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~ 128 (285)
T 4fhz_A 64 EATSLVVFLHGYGA-----------DGADLL----GLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSET 128 (285)
T ss_dssp CCSEEEEEECCTTB-----------CHHHHH----TTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHH
T ss_pred CCCcEEEEEcCCCC-----------CHHHHH----HHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccc
Confidence 35899999999641 112222 22344544 38888875431 11222222111 00
Q ss_pred h----HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccc
Q 004475 577 F----VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTL 652 (751)
Q Consensus 577 ~----~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~ 652 (751)
. .....+++...++.+.++..+|++||+++|+|+||.+|+.++.++|+.++++|++++....
T Consensus 129 ~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~-------------- 194 (285)
T 4fhz_A 129 AAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA-------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC--------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC--------------
Confidence 0 1223456667777777777799999999999999999999999999999999999985321
Q ss_pred hhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHH
Q 004475 653 WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 732 (751)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 732 (751)
++.+. .....++|+|++||+.|++|| +..++++++.|++.|.++++++|++.+|.+.. +.+..+
T Consensus 195 ---~~~~~------~~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~-----~~l~~~ 258 (285)
T 4fhz_A 195 ---PERLA------EEARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVMKGTGHGIAP-----DGLSVA 258 (285)
T ss_dssp ---HHHHH------HHCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEETTCCSSCCH-----HHHHHH
T ss_pred ---chhhh------hhhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH-----HHHHHH
Confidence 00010 112346899999999999999 99999999999999999999999999999752 557789
Q ss_pred HHHHHHHhcC
Q 004475 733 DRWLQKYCLS 742 (751)
Q Consensus 733 ~~fl~~~l~~ 742 (751)
.+||+++|..
T Consensus 259 ~~fL~~~Lpd 268 (285)
T 4fhz_A 259 LAFLKERLPD 268 (285)
T ss_dssp HHHHHHHCC-
T ss_pred HHHHHHHCcC
Confidence 9999999864
No 88
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.81 E-value=2.1e-19 Score=190.40 Aligned_cols=229 Identities=14% Similarity=0.079 Sum_probs=152.5
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
...+.+.++. ++..+.++++.|.+ .++.|+||++||.+.. ...+.......++++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~--------------~~~~~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSL--------------QTDMWRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSC--------------GGGGHHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCcc--------------HHHHHHHHHHHHHhCCCEEE
Confidence 4578888886 77899999999976 3458999999996411 01111123456678999999
Q ss_pred EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475 559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 638 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~ 638 (751)
+ .+++|+|.+...... .+....+..+++++.+...+|.++|+++|||+||++|+.++..+|++++++|+++|..+.
T Consensus 226 ~---~D~~G~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 T---VDMPSVGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp E---ECCTTSGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred E---ECCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 9 455566655322111 112223357788888887788899999999999999999999999999999999997541
Q ss_pred CCCccCc----ccc--------cc-cchhhHH---HHHhcCcccc----cCCCCCCEEEEEcCCCCCCCCChHHHHHHHH
Q 004475 639 TLTPFGF----QTE--------FR-TLWEATN---VYIEMSPITH----ANKIKKPILIIHGEVDDKVGLFPMQAERFFD 698 (751)
Q Consensus 639 ~~~~~~~----~~~--------~~-~~~~~~~---~~~~~~~~~~----~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~ 698 (751)
......+ ... .. ....... .+...++... +.++++|+|+++|++|.++| ...+..+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~~ 379 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVAF 379 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 1110000 000 00 0000011 1122222211 35788999999999999998 887776655
Q ss_pred HHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 699 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 699 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
...+++++++++. +. ..........+.+||.+++.
T Consensus 380 ----~~~~~~l~~i~g~-~~---h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ----FSTYGKAKKISSK-TI---TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ----TBTTCEEEEECCC-SH---HHHHHHHHHHHHHHHHHHHT
T ss_pred ----hCCCceEEEecCC-Cc---ccchHHHHHHHHHHHHHHhc
Confidence 4567899999983 21 12456788899999999875
No 89
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.81 E-value=2.4e-18 Score=164.89 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=131.7
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC----------CCCCCCCCCCC---chh
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI----------PIIGEGDKLPN---DRF 577 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~----------~~~g~g~~~~~---~~~ 577 (751)
+.| ||++||.|.. ...+ ..+...++ .+|.|++++.. +..|+|..... ...
T Consensus 16 ~~p-vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~ 78 (209)
T 3og9_A 16 LAP-LLLLHSTGGD-----------EHQL----VEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLES 78 (209)
T ss_dssp SCC-EEEECCTTCC-----------TTTT----HHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHH
T ss_pred CCC-EEEEeCCCCC-----------HHHH----HHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHH
Confidence 478 9999996421 1111 13334444 88999986632 13333332111 122
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHH
Q 004475 578 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 657 (751)
Q Consensus 578 ~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 657 (751)
.....+++.+.++.+.++..+|+++|+++||||||.+|+.++.++|++++++|+++|.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 79 LDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc----------------
Confidence 3445666777777777766688899999999999999999999999999999999997542111
Q ss_pred HHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 658 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 658 ~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
......++|+|++||++|.++| +..++++++.|++.+.++++++++ ++|.+. .+....+.+||.
T Consensus 143 --------~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~ 206 (209)
T 3og9_A 143 --------QTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLT 206 (209)
T ss_dssp --------CCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHH
T ss_pred --------ccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHH
Confidence 0123467999999999999999 999999999999999999999998 699884 255788899998
Q ss_pred HH
Q 004475 738 KY 739 (751)
Q Consensus 738 ~~ 739 (751)
++
T Consensus 207 ~~ 208 (209)
T 3og9_A 207 ET 208 (209)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 90
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.80 E-value=2.9e-18 Score=180.72 Aligned_cols=239 Identities=14% Similarity=0.108 Sum_probs=158.8
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCC--CchHHHHHHhCCeE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TPTSSLIFLARRFA 556 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~~ 556 (751)
+..+.+.+...+|..+.++.+.|........++.|+||++||.+... ..|... ...++..|+++||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~-----------~~~~~~~~~~~~a~~l~~~G~~ 93 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-----------TNWISNLPNNSLAFILADAGYD 93 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-----------GGGSSSCTTTCHHHHHHHTTCE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch-----------hhhhcCCCcccHHHHHHHCCCC
Confidence 45788888888998899888876542111112478999999975221 122221 12345578889999
Q ss_pred EEEcCCCCCCCCCCCCCC-----------chhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475 557 VLAGPSIPIIGEGDKLPN-----------DRFVEQLVS-SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 624 (751)
Q Consensus 557 v~~~~~~~~~g~g~~~~~-----------~~~~~~~~~-d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~ 624 (751)
|++ .+.+|+|.+... .....+..+ |+.++++++.+.. +.++++++||||||.+|+.++.++|+
T Consensus 94 vi~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~ 168 (377)
T 1k8q_A 94 VWL---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp EEE---CCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred EEE---ecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCch
Confidence 999 556677766431 223456677 9999999987653 34689999999999999999999998
Q ss_pred ---ceeEEEEccCCCCCCCCccCc---------------------cccc-c-----c-----------------------
Q 004475 625 ---LFCCGIARSGSYNKTLTPFGF---------------------QTEF-R-----T----------------------- 651 (751)
Q Consensus 625 ---~~~~~v~~~~~~d~~~~~~~~---------------------~~~~-~-----~----------------------- 651 (751)
+++++|+++|........... +... . .
T Consensus 169 ~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T 1k8q_A 169 LAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT 248 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG
T ss_pred hhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCc
Confidence 899999999875432110000 0000 0 0
Q ss_pred -ch--hhHHHHH-------------------------hc----------------CcccccCCCCCCEEEEEcCCCCCCC
Q 004475 652 -LW--EATNVYI-------------------------EM----------------SPITHANKIKKPILIIHGEVDDKVG 687 (751)
Q Consensus 652 -~~--~~~~~~~-------------------------~~----------------~~~~~~~~~~~P~li~~G~~D~~vp 687 (751)
.+ .....+. .. .+...+.++++|+|+++|++|.++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 328 (377)
T 1k8q_A 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred ccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccC
Confidence 00 0000000 00 0122367789999999999999998
Q ss_pred CChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc--cccHHHHHHHHHHHHHH
Q 004475 688 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQK 738 (751)
Q Consensus 688 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~ 738 (751)
+..++.+++.+... .+++++++++|.... .+....+.+.+.+||++
T Consensus 329 --~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 329 --PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp --HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred --HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 88887777665422 248999999998753 35677888999999975
No 91
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.80 E-value=1.6e-18 Score=173.29 Aligned_cols=227 Identities=12% Similarity=0.085 Sum_probs=153.1
Q ss_pred ceEEEEE-EcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 480 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~-~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
+.+.+.+ ...+|..+.+..+.+.+ .+.|+||++||.+.. ...+. .......++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~-----------~~~~~--~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSD-----------MTGTK--ALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCC-----------TTSHH--HHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCccc-----------cccch--HHHHHHHHHhCCCcEE
Confidence 3455555 44578888887776653 126899999996411 01110 1123456668899999
Q ss_pred EcCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CC---CceeEEE
Q 004475 559 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGI 630 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~---~p---~~~~~~v 630 (751)
+ .+.+|+|.+... .....+..+|+.++++++. ..+++++|||+||.+|+.++.+ +| ++++++|
T Consensus 71 ~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 R---FDYSGHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp E---ECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred E---eccccCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 9 555677766443 2345677888888888873 4689999999999999999999 99 8999999
Q ss_pred EccCCCCCCCCc-cC-ccc---------------------ccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCC
Q 004475 631 ARSGSYNKTLTP-FG-FQT---------------------EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 687 (751)
Q Consensus 631 ~~~~~~d~~~~~-~~-~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp 687 (751)
+.+|..+..... +. +.. ....................+.++++|+|+++|++|..+|
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 221 (270)
T 3llc_A 142 LIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP 221 (270)
T ss_dssp EESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC
T ss_pred EecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC
Confidence 999975421100 00 000 0000001112233334455677889999999999999998
Q ss_pred CChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 688 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 688 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
...++.+++.+.. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 --~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 --YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp --HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888876643 3589999999999876556666777778888764
No 92
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=2e-18 Score=196.69 Aligned_cols=291 Identities=13% Similarity=0.077 Sum_probs=185.5
Q ss_pred eeEEeecCCCCCCCCcccccCCCCccccc---------ceeec--CCCCe-EEEEEeecccccccCCceeEEEEEcC--C
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKIN---------FVSWS--PDGKR-IAFSVRVDEEDNVSSCKLRVWIADAE--T 71 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~---------~p~~S--PDG~~-iaf~~~~~~~~~~~~~~~~l~i~~~~--~ 71 (751)
.||++ ..+ |+.++|+..+ ..+. .++|| |||++ |||+.. ...+||+++++ +
T Consensus 50 ~l~~~-~~~----~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~---------~~~~l~~~~~~~~g 113 (662)
T 3azo_A 50 TLVRR-RAD----GAEESALPAP--WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF---------GDQRLYAFEPDAPG 113 (662)
T ss_dssp EEEEE-CTT----SCEEESSCTT--CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT---------TTCCEEEECTTSTT
T ss_pred EEEEE-CCC----CCcceeCCCC--ccccccccccCCccceeeeecCCCeEEEEEEC---------CCCeEEEEcCCCCC
Confidence 45555 444 7888887432 2233 56676 99999 999752 25789999998 6
Q ss_pred -CCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhh
Q 004475 72 -GEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESL 150 (751)
Q Consensus 72 -g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (751)
++.++|+..........+..++|||||++|+|.+.+.....+
T Consensus 114 ~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~------------------------------------- 156 (662)
T 3azo_A 114 GAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGP------------------------------------- 156 (662)
T ss_dssp CCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSST-------------------------------------
T ss_pred CCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCC-------------------------------------
Confidence 889999874311001135688999999999998653111000
Q ss_pred hhhheeeEEEEEcC-C------CCceecC-CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-Cc-
Q 004475 151 FDYYTTAQLVLGSL-D------GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK- 219 (751)
Q Consensus 151 ~~~~~~~~l~~~~~-~------G~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~- 219 (751)
.....+||++++ + |+.++++ .. ..+..++|||||++|++.+...+. ......+|++++++ ++
T Consensus 157 --~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~-----~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 157 --SDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR-----MPWEGTELKTARVTEDGR 229 (662)
T ss_dssp --TCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC-----CTTTCEEEEEEEECTTSC
T ss_pred --CCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC-----CCCCCcEEEEEEECCCCc
Confidence 002368999999 5 6777888 65 667789999999999998765321 01113689999998 46
Q ss_pred --eeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee
Q 004475 220 --LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (751)
Q Consensus 220 --~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 297 (751)
+.+++.... ...+..+.|||||+ +++++..+ ...+||+++++ ++..+.++..
T Consensus 230 ~~~~~~l~~~~------------~~~~~~~~~spdg~--l~~~~~~~---------~~~~l~~~~~~---~~~~~~l~~~ 283 (662)
T 3azo_A 230 FADTRTLLGGP------------EEAIAQAEWAPDGS--LIVATDRT---------GWWNLHRVDPA---TGAATQLCRR 283 (662)
T ss_dssp EEEEEEEEEET------------TBCEEEEEECTTSC--EEEEECTT---------SSCEEEEECTT---TCCEEESSCC
T ss_pred ccccEEeCCCC------------CceEcceEECCCCe--EEEEECCC---------CCeEEEEEECC---CCceeecccc
Confidence 555554321 12245789999999 44544221 12379999875 4555555544
Q ss_pred ceeE---------E-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEE
Q 004475 298 DLRF---------S-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 367 (751)
Q Consensus 298 ~~~~---------~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~ 367 (751)
.... . ++|+||++.++ .... ...+||.++++++ ..+.++... ..+. ..|++||+.++
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~-~~~~--~~~~l~~~d~~~~--~~~~l~~~~-~~~~-------~~~s~~~~~~~ 350 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAV-VHGK--GAAVLGILDPESG--ELVDAAGPW-TEWA-------ATLTVSGTRAV 350 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEE-EEBS--SSCEEEEEETTTT--EEEECCSSC-CEEE-------EEEEEETTEEE
T ss_pred cccccCccccccCceEeEeCCCEEEE-EEEc--CccEEEEEECCCC--cEEEecCCC-CeEE-------EEEecCCCEEE
Confidence 3332 3 56677877544 4433 5578999999874 345554321 1111 22388888888
Q ss_pred EeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeec
Q 004475 368 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 412 (751)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 412 (751)
+..... .....|+++|+++++.+.++..
T Consensus 351 ~~~~~~-----------------~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 351 GVAASP-----------------RTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp EEEEET-----------------TEEEEEEEEETTTCCEEEEESC
T ss_pred EEEcCC-----------------CCCCEEEEEECCCCceEEeecC
Confidence 877331 1234799999999988777654
No 93
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.80 E-value=7e-18 Score=163.85 Aligned_cols=185 Identities=17% Similarity=0.191 Sum_probs=138.1
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh--CCeEEEEcCCC----------------CCCCCCCC
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDK 571 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~~~~----------------~~~g~g~~ 571 (751)
.+.|+||++||.+.. ...+ ......|++ +||.|++++.+ +.+|+|.+
T Consensus 22 ~~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 86 (226)
T 3cn9_A 22 NADACIIWLHGLGAD-----------RTDF----KPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA 86 (226)
T ss_dssp TCCEEEEEECCTTCC-----------GGGG----HHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST
T ss_pred CCCCEEEEEecCCCC-----------hHHH----HHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc
Confidence 357999999997521 1111 245567777 99999996643 34466543
Q ss_pred CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEccCCCCCCCCccCccccc
Q 004475 572 LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEF 649 (751)
Q Consensus 572 ~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~d~~~~~~~~~~~~ 649 (751)
... .....+..+++..+++.+.+ ..++.++|+++|||+||.+|+.++. ++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------- 157 (226)
T 3cn9_A 87 RAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------- 157 (226)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------
T ss_pred ccccchhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------
Confidence 222 22345667777788887766 3467789999999999999999999 999999999999997542110
Q ss_pred ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475 650 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 729 (751)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (751)
+ +. ...++++|+|+++|+.|..+| +..++++++.+...+.++++++++ ++|.+.. +..
T Consensus 158 ---~-------~~----~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~ 215 (226)
T 3cn9_A 158 ---L-------AL----DERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVSL-----EEI 215 (226)
T ss_dssp ---C-------CC----CTGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCCH-----HHH
T ss_pred ---h-------hh----cccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcch-----hhH
Confidence 0 00 113467999999999999999 999999999999988899999999 9998742 456
Q ss_pred HHHHHHHHHHh
Q 004475 730 WETDRWLQKYC 740 (751)
Q Consensus 730 ~~~~~fl~~~l 740 (751)
+.+.+||.+++
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 78999998764
No 94
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.79 E-value=7.2e-19 Score=179.70 Aligned_cols=226 Identities=17% Similarity=0.084 Sum_probs=153.4
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEE
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~ 558 (751)
..+.+.++..++ .+.+.+| +. .++.|+||++||+||..++ ...+ ...+..|+ ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVICS--------IESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCcccccCC--------hhHh----HHHHHHHHHHhCCEEE
Confidence 578888887776 7899988 42 2347999999999764322 1222 23456677 5799999
Q ss_pred EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 004475 559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 631 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~ 631 (751)
++ +++|+|++.. ....+|+.++++|+.+. ..+|+++|+|+|||+||++|+.++.+.|++ ++++|+
T Consensus 115 ~~---dyrg~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SV---DYRLAPEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EE---ECCCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred Ee---cCCCCCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 94 4556666532 23467788888888775 246778999999999999999999887665 999999
Q ss_pred ccCCCCCCCCccCcccc-cccc-hhh--H----HHH---------HhcCccc-ccCCCCCCEEEEEcCCCCCCCCChHHH
Q 004475 632 RSGSYNKTLTPFGFQTE-FRTL-WEA--T----NVY---------IEMSPIT-HANKIKKPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 632 ~~~~~d~~~~~~~~~~~-~~~~-~~~--~----~~~---------~~~~~~~-~~~~~~~P~li~~G~~D~~vp~~~~~~ 693 (751)
++|..+.......+... .... +.. . ..| ...+++. .+..+ +|+|+++|+.|.++ ..+
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 99987743211000000 0000 000 0 001 0112222 12222 69999999999984 467
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHH
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQK 738 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~ 738 (751)
..+.++|.+.+.+++++++++++|.+... +....+++.+.+||.+
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 78899999999999999999999988643 3346778888888864
No 95
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.79 E-value=1.8e-18 Score=170.78 Aligned_cols=203 Identities=16% Similarity=0.112 Sum_probs=144.4
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---h-hHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---R-FVEQLVSSAEA 587 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~-~~~~~~~d~~~ 587 (751)
.|+||++||.+. .... ...+...|+++||.|++ .+.+|+|.+.... . ......+|+.+
T Consensus 22 ~~~vv~~HG~~~-----------~~~~----~~~~~~~l~~~G~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTG-----------SPND----MNFMARALQRSGYGVYV---PLFSGHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTC-----------CGGG----GHHHHHHHHHTTCEEEE---CCCTTCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCC-----------CHHH----HHHHHHHHHHCCCEEEe---cCCCCCCCCChhhhcCcccHHHHHHHHHH
Confidence 588999999641 1111 13566788889999999 5666777763321 1 34556789999
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccc------------ccch--
Q 004475 588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF------------RTLW-- 653 (751)
Q Consensus 588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~------------~~~~-- 653 (751)
+++++..+ ..+++++|||+||.+|+.++.++|+.++++++.+|............... ...+
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999876 46999999999999999999999999999999988765321110000000 0000
Q ss_pred ----hhHHHHHhc--CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHH
Q 004475 654 ----EATNVYIEM--SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 727 (751)
Q Consensus 654 ----~~~~~~~~~--~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 727 (751)
.....+... .....+.++++|+|+++|++|..+| +..+..+++.+... .+++++++++++|.+.......+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 000000000 1233467789999999999999999 89999998888764 57899999999999875555888
Q ss_pred HHHHHHHHHHHH
Q 004475 728 VIWETDRWLQKY 739 (751)
Q Consensus 728 ~~~~~~~fl~~~ 739 (751)
+.+.+.+||++.
T Consensus 237 ~~~~i~~fl~~~ 248 (251)
T 3dkr_A 237 LEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999999865
No 96
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.79 E-value=4.9e-18 Score=166.55 Aligned_cols=190 Identities=16% Similarity=0.139 Sum_probs=134.1
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-----CeEEEEcCCC----------------CCCCCC
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-----RFAVLAGPSI----------------PIIGEG 569 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----G~~v~~~~~~----------------~~~g~g 569 (751)
+.|+||++||.|.. ...+. .+...++.+ ||.|++++.. +..|.+
T Consensus 22 ~~p~vv~lHG~g~~-----------~~~~~----~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDS-----------GQGLR----MWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCC-----------HHHHH----HHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCc-----------hhhHH----HHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 57999999996421 01111 234455544 7888885541 112222
Q ss_pred CCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccc
Q 004475 570 DKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 648 (751)
Q Consensus 570 ~~~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~ 648 (751)
..... .....+..+++..+++.+.+ ..++.++|+|+||||||.+|+.++.++|++++++|+++|..+.....
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------ 159 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAV------ 159 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHH------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHH------
Confidence 22111 12344556666677666654 34788999999999999999999999999999999999976532110
Q ss_pred cccchhhHHHHHhcCcccccCCCCCC-EEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHH
Q 004475 649 FRTLWEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 727 (751)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~P-~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 727 (751)
...+. .....+| +|++||++|.++| ...++++++.+++.+.+++++++++++|.+. .+
T Consensus 160 -------~~~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 160 -------YQALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp -------HHHHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred -------HHHHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 00000 1234566 9999999999999 9999999999999999999999999999985 36
Q ss_pred HHHHHHHHHHHHhcCC
Q 004475 728 VIWETDRWLQKYCLSN 743 (751)
Q Consensus 728 ~~~~~~~fl~~~l~~~ 743 (751)
..+.+.+||.+++...
T Consensus 219 ~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 219 ELDILKLWILTKLPGE 234 (239)
T ss_dssp HHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhCCCc
Confidence 6888999999998653
No 97
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.79 E-value=2.4e-18 Score=194.75 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=163.8
Q ss_pred EcCCCce--EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCccc-----CCcc------------------------cC-
Q 004475 487 QRKDGVP--LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDA-----AGQV------------------------RG- 534 (751)
Q Consensus 487 ~~~~~~~--i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~-----~~~~------------------------~~- 534 (751)
+..+|.+ +.+.+|+|.+ .+++|+||..||.+.+.... ...+ .+
T Consensus 179 ~~~DG~~d~L~a~l~~P~~-----~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 253 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAK 253 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC-----CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccc
Confidence 3568888 9999999986 24699999998865331110 0000 00
Q ss_pred -------CCCccCC-CCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcC---------
Q 004475 535 -------SPNEFSG-MTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRG--------- 596 (751)
Q Consensus 535 -------~~~~~~~-~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~--------- 596 (751)
....+.. ........|+++||+|+. .+.+|+|.+.... .+.....+|+.++++||..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~---~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 254 ELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIY---VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEE---ECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccccchhccccccccchHHHHHHCCCEEEE---ECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 0001100 012345788999999999 5566776664322 223367899999999998431
Q ss_pred -----CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC---------CccCccccc---------ccch
Q 004475 597 -----VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTEF---------RTLW 653 (751)
Q Consensus 597 -----~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~---------~~~~~~~~~---------~~~~ 653 (751)
..+..||+++|+||||++++.+|+.+|+.++++|+.+|+.++.. ...++.... ...+
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 13456999999999999999999999999999999998764110 000111000 0000
Q ss_pred h----------------------------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC
Q 004475 654 E----------------------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 705 (751)
Q Consensus 654 ~----------------------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~ 705 (751)
. ..+.|...++...+++|++|+|++||..|..+| +.++.+++++++. +.
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GH 487 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TC
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-CC
Confidence 0 001233455667888999999999999999998 8999999999987 66
Q ss_pred cEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 706 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 706 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
+.++++ ++++|..........+.+.+.+||+++|+..
T Consensus 488 ~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 488 AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 666665 4668986432223356889999999999854
No 98
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.79 E-value=1.1e-17 Score=159.89 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=138.6
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCch--HHHHHHhCCeEEE
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVL 558 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~G~~v~ 558 (751)
.+...+. .++.++.+++|.|.+ +.|+||++||.+.. ...+ .. ....|+++||.|+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~-----------~~~~----~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFT-----------SMDW----DKADLFNNYSKIGYNVY 60 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCC-----------GGGG----GGGTHHHHHHTTTEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCC-----------cccc----chHHHHHHHHhCCCeEE
Confidence 3444444 478899999999875 26899999997521 1112 23 5678889999999
Q ss_pred EcCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 559 AGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 559 ~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
++ +.+|+|.+ ....... ...++..+.+..+.+. ++.++|+++|||+||.+|+.++.++|++++++++++|.
T Consensus 61 ~~---d~~g~g~s~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 134 (207)
T 3bdi_A 61 AP---DYPGFGRSASSEKYGIDR-GDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134 (207)
T ss_dssp EE---CCTTSTTSCCCTTTCCTT-CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred EE---cCCcccccCcccCCCCCc-chHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCc
Confidence 94 45566655 3221110 0123333333333333 23468999999999999999999999999999999986
Q ss_pred CCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475 636 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 715 (751)
Q Consensus 636 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (751)
... .+ ...+.++++|+|+++|++|..+| ...++.+.+.+ .++++++++++
T Consensus 135 ~~~---~~---------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~ 184 (207)
T 3bdi_A 135 WVE---SL---------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASII----SGSRLEIVEGS 184 (207)
T ss_dssp SCG---GG---------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHS----TTCEEEEETTC
T ss_pred ccc---ch---------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhc----CCceEEEeCCC
Confidence 211 00 12345678999999999999998 88888887766 35689999999
Q ss_pred CCcCCccccHHHHHHHHHHHHHH
Q 004475 716 HHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 716 ~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+|.+. .+....+.+.+.+||++
T Consensus 185 ~H~~~-~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 185 GHPVY-IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCcc-ccCHHHHHHHHHHHHhh
Confidence 99875 34466778888888864
No 99
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=1.5e-16 Score=165.92 Aligned_cols=275 Identities=8% Similarity=-0.015 Sum_probs=175.2
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
....++|||||++|++...... .......|+++|+++++......... ....++|+|||++|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~---~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~---- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSR---KLDKGGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNTV---- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCT---TTEESEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEETT----
T ss_pred CccceEECCCCCEEEEEcCCCc---CCCCCccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEecC----
Confidence 4677899999999977542100 00125799999999887655433222 24578999999988877431
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCC--c--------eEEe
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP--A--------VYTA 179 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~--~--------~~~~ 179 (751)
...|+++|+ +|+. ..+..+ . ....
T Consensus 110 --------------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 110 --------------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp --------------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred --------------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 147888888 6643 333221 1 2567
Q ss_pred eeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEE
Q 004475 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (751)
Q Consensus 180 ~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~ 259 (751)
++|||||++|++..... ...|++||+++++......... ..+..++|+|||++ +++
T Consensus 146 ~~~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~-l~~ 201 (353)
T 3vgz_A 146 LVADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKR-LYT 201 (353)
T ss_dssp EEEETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTE-EEE
T ss_pred EEECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCE-EEE
Confidence 99999999998875321 3469999998776554322111 12347899999998 666
Q ss_pred EEeccCCCCccccCcccceeeccCCCCCCCCc-eEeEe----eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK----LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~----~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
.. ..+.|+++++. .+.. ..+.. ...... +.|+|||+.|+++. .....|+++++.++
T Consensus 202 ~~------------~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 202 TN------------ADGELITIDTA---DNKILSRKKLLDDGKEHFFINISLDTARQRAFITD---SKAAEVLVVDTRNG 263 (353)
T ss_dssp EC------------TTSEEEEEETT---TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE---SSSSEEEEEETTTC
T ss_pred Ec------------CCCeEEEEECC---CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe---CCCCEEEEEECCCC
Confidence 43 13578888875 2222 22222 122344 79999999887655 22357999999775
Q ss_pred CCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475 334 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 413 (751)
Q Consensus 334 ~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 413 (751)
+.......... ..++|+|||++|++... ....|.+||+.+++........
T Consensus 264 --~~~~~~~~~~~--------~~~~~s~dg~~l~v~~~--------------------~~~~v~~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 264 --NILAKVAAPES--------LAVLFNPARNEAYVTHR--------------------QAGKVSVIDAKSYKVVKTFDTP 313 (353)
T ss_dssp --CEEEEEECSSC--------CCEEEETTTTEEEEEET--------------------TTTEEEEEETTTTEEEEEEECC
T ss_pred --cEEEEEEcCCC--------ceEEECCCCCEEEEEEC--------------------CCCeEEEEECCCCeEEEEEecC
Confidence 22222221111 12789999998877662 2247899999988765554432
Q ss_pred chhhhhceeeeecCCcceeeccCCCEEEEEEec
Q 004475 414 REKYFETAVALVFGQGEEDINLNQLKILTSKES 446 (751)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 446 (751)
.. + ..++|+|||+.|+++...
T Consensus 314 ~~-----~-------~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 TH-----P-------NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SE-----E-------EEEEECTTSCEEEEEEEC
T ss_pred CC-----C-------CeEEEcCCCCEEEEEEcc
Confidence 11 1 236899999988887765
No 100
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=1.3e-17 Score=173.76 Aligned_cols=294 Identities=14% Similarity=0.181 Sum_probs=172.8
Q ss_pred CcceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (751)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~ 82 (751)
+..+||++++.+ |+.++| ..+..|+|||||++|||++... ..+..+||++++++|+.++++....
T Consensus 41 ~~~~l~~~d~~~----~~~~~l------~~~~~~~~SpDg~~la~~~~~~-----~~~~~~l~~~~~~~g~~~~l~~~~~ 105 (347)
T 2gop_A 41 YENTIVIENLKN----NARRFI------ENATMPRISPDGKKIAFMRANE-----EKKVSEIWVADLETLSSKKILEAKN 105 (347)
T ss_dssp EEEEEEEEETTT----CCEEEE------ESCEEEEECTTSSEEEEEEEET-----TTTEEEEEEEETTTTEEEEEEEESE
T ss_pred ccceEEEEeCCC----CceEEc------ccCCCeEECCCCCEEEEEEecc-----CCCcceEEEEECCCCceEEEEcCCC
Confidence 456899999999 888777 2467899999999999987521 1256789999999999999875432
Q ss_pred ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
+..++|||||+.|+|.+....... .....+...+..++..+......+||++
T Consensus 106 ------~~~~~wspdg~~l~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 106 ------IRSLEWNEDSRKLLIVGFKRREDE----------------------DFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp ------EEEEEECTTSSEEEEEEECCCC-------------------------------CCCC---------CEEEEEEE
T ss_pred ------ccceeECCCCCEEEEEEccCCCcC----------------------CcEEEcccceeecCcccccCccceEEEE
Confidence 567899999999999865311000 0000111122222222222234689999
Q ss_pred cC-CCCc-eecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCC-ceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 163 SL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARF-SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 163 ~~-~G~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
++ +|+. ++++.. .+..+.||||| |+|........ .... ..+||+++ +++.++++.. ..
T Consensus 158 d~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~----~~~~~~~~l~~~d--~~~~~~l~~~-~~--------- 218 (347)
T 2gop_A 158 DTESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREII----PQYFKFWDIYIWE--DGKEEKMFEK-VS--------- 218 (347)
T ss_dssp ETTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSS----CCSSCCEEEEEEE--TTEEEEEEEE-ES---------
T ss_pred ECCCCeEEeeecCC-CcccccCCCCe--EEEEEeccccc----ccccccccEEEeC--CCceEEeccC-cc---------
Confidence 99 6666 677653 56688999999 66655332100 0002 45788998 6666666442 11
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE--EEEecCCceEEEee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS--VSWCDDSLALVNET 316 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~--~~~spdg~~l~~~~ 316 (751)
...+||||++ |++....... .......|++++ . + ..+.++.. ...+. +.|+ || +++..
T Consensus 219 ------~~~~spdg~~-l~~~~~~~~~----~~~~~~~l~~~d-~---~-~~~~l~~~~~~~~~~~~~~s-dg--~~~~~ 279 (347)
T 2gop_A 219 ------FYAVDSDGER-ILLYGKPEKK----YMSEHNKLYIYD-G---K-EVMGILDEVDRGVGQAKIKD-GK--VYFTL 279 (347)
T ss_dssp ------EEEEEECSSC-EEEEECCSSS----CCCSSCEEEEEC-S---S-CEEESSTTCCSEEEEEEEET-TE--EEEEE
T ss_pred ------eeeECCCCCE-EEEEEccccC----CccccceEEEEC-C---C-ceEeccccCCcccCCccEEc-Cc--EEEEE
Confidence 2245999999 7776532110 011235788887 3 3 33444432 33443 7899 88 65655
Q ss_pred eecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCcee
Q 004475 317 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 396 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 396 (751)
.. ....+|| ++ ++ +.+.++... ..+.. ++|+| + +++.... ......|
T Consensus 280 ~~-~~~~~l~-~~-~g---~~~~~~~~~-~~v~~------~~~s~--~-~~~~~~~-----------------~~~~~~l 326 (347)
T 2gop_A 280 FE-EGSVNLY-IW-DG---EIKPIAKGR-HWIMG------FDVDE--I-VVYLKET-----------------ATRLREL 326 (347)
T ss_dssp EE-TTEEEEE-EE-SS---SEEEEECSS-SEEEE------EEESS--S-EEEEEEC-----------------SSSCCEE
T ss_pred ec-CCcEEEE-Ec-CC---ceEEEecCC-CeEEe------eeeeC--c-EEEEEcC-----------------CCChHHh
Confidence 33 2356899 88 43 334454332 11222 77888 3 4444421 1122378
Q ss_pred EEEecCCCceeEEeecc
Q 004475 397 DLFDINTGSKERIWESN 413 (751)
Q Consensus 397 ~~~d~~~g~~~~l~~~~ 413 (751)
|.++ |+.++|+..+
T Consensus 327 ~~~~---g~~~~lt~~n 340 (347)
T 2gop_A 327 FTWD---GEEKQLTDYN 340 (347)
T ss_dssp EEES---SSEEECCCTT
T ss_pred eEeC---CcEEEecccc
Confidence 8887 5666666544
No 101
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.78 E-value=3.4e-18 Score=175.97 Aligned_cols=216 Identities=8% Similarity=-0.011 Sum_probs=146.4
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCCCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 572 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~~g~g~~~ 572 (751)
+.++++.|.+ ++.|+||++|||||..++ ...+ ......|+ ..||.|++++++ +.+.
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~~--------~~~~----~~~~~~la~~~g~~vi~~D~r---~~~~-- 140 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQP--------SPFH----WRLLDKITLSTLYEVVLPIYP---KTPE-- 140 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSCC--------CHHH----HHHHHHHHHHHCSEEEEECCC---CTTT--
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCCC--------CHHH----HHHHHHHHHHhCCEEEEEeCC---CCCC--
Confidence 6778888864 136999999998753211 1111 12344555 469999996654 3322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEccCCCCCCCCccCcc-c
Q 004475 573 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQ-T 647 (751)
Q Consensus 573 ~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~d~~~~~~~~~-~ 647 (751)
......++|+.++++++.++ ++.++|+|+||||||.+|+.++.+.|++ ++++|+++|..+......... .
T Consensus 141 ---~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 141 ---FHIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ---CCchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 12355688999999999887 6778999999999999999999988766 999999999876432211111 0
Q ss_pred c-cccch---hh----HHHHHh--------cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEE
Q 004475 648 E-FRTLW---EA----TNVYIE--------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 711 (751)
Q Consensus 648 ~-~~~~~---~~----~~~~~~--------~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~ 711 (751)
. ....+ .. ...+.. .+++...-..-+|+|+++|++|.. ...+..+.+++.+.+.++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEEE
Confidence 0 00000 00 011111 122211111126999999999964 5677889999999889999999
Q ss_pred eCCCCCcCCc--cccHHHHHHHHHHHHHHHhc
Q 004475 712 LPFEHHVYAA--RENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 712 ~~~~~H~~~~--~~~~~~~~~~~~~fl~~~l~ 741 (751)
+|+++|.+.. .+....+.+.+.+||.+++.
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999864 25567888999999988765
No 102
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.78 E-value=1.3e-18 Score=174.55 Aligned_cols=200 Identities=13% Similarity=0.102 Sum_probs=136.2
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH----HhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHH
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF----LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSA 585 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~ 585 (751)
++.|+||++|||||..+.. .... ...+...| +++||.|++++++ +.+... ....++|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~------~~~~----~~~~~~~L~~~a~~~g~~vi~~d~r---~~~~~~-----~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN------TPND----FNQLANTIKSMDTESTVCQYSIEYR---LSPEIT-----NPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC------CGGG----GHHHHHHHHHHCTTCCEEEEEECCC---CTTTSC-----TTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC------ChHH----HHHHHHHHhhhhccCCcEEEEeecc---cCCCCC-----CCcHHHHH
Confidence 3589999999987643211 0011 12344455 5789999996653 333221 23457888
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----------------CCceeEEEEccCCCCCCCCccCccc-
Q 004475 586 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----------------PHLFCCGIARSGSYNKTLTPFGFQT- 647 (751)
Q Consensus 586 ~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-----------------p~~~~~~v~~~~~~d~~~~~~~~~~- 647 (751)
.++++++.++ ++.++|+|+||||||.+|+.++.+. |++++++|+++|.++..........
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 8999999876 4678999999999999999999885 7889999999997652211000000
Q ss_pred ---------ccccchh-hHHHHHhcCcc--cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475 648 ---------EFRTLWE-ATNVYIEMSPI--THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 715 (751)
Q Consensus 648 ---------~~~~~~~-~~~~~~~~~~~--~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (751)
.....|. ... ..++. .....+++|+|++||++|.++| +.+++.+++.++..+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEPS---RVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCHH---HHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhccc---ccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 0000011 000 00110 0122267999999999999998 99999999999999999999999999
Q ss_pred CCcCCccccHHHHHHHHHHHH
Q 004475 716 HHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 716 ~H~~~~~~~~~~~~~~~~~fl 736 (751)
+|.+.. +. .++.+.+.+||
T Consensus 254 gH~~~~-~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDVY-KN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGGG-GC-HHHHHHHHHTC
T ss_pred cccccc-cC-hHHHHHHHHHc
Confidence 999753 33 67777787775
No 103
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.78 E-value=1.1e-17 Score=162.37 Aligned_cols=181 Identities=17% Similarity=0.122 Sum_probs=133.9
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC---------CchhHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 581 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 581 (751)
+.|+||++||.+. .... .......|+. ||.|++++. +.+|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~-----------~~~~----~~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGG-----------NELD----LLPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTC-----------CTTT----THHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCC-----------ChhH----HHHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 4799999999751 1111 1234455555 999999532 5566664321 11112333
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHh
Q 004475 582 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 661 (751)
Q Consensus 582 ~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 661 (751)
++++.+.++++.++..++..+|+++|||+||.+|+.++.++|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 55566667776777667889999999999999999999999999999999999754321
Q ss_pred cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 662 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 662 ~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
......+++|+|+++|+.|..+| ...++.+++.+.+.+.++++ ++++++|.+. .+..+.+.+||.+++
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 01123357999999999999998 99999999999988888888 9999999874 356788899998764
No 104
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.3e-17 Score=170.89 Aligned_cols=228 Identities=14% Similarity=0.149 Sum_probs=146.2
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
...+.+.+.. ++..+...++.+... ++..|+||++||.+.. ... ...+...|+++||.|+
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~vv~~hG~~~~-----------~~~----~~~~~~~l~~~g~~v~ 77 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAPK----KANGRTILLMHGKNFC-----------AGT----WERTIDVLADAGYRVI 77 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECCS----SCCSCEEEEECCTTCC-----------GGG----GHHHHHHHHHTTCEEE
T ss_pred ccceeEEEec-CCCCeeEEEeecCCC----CCCCCeEEEEcCCCCc-----------chH----HHHHHHHHHHCCCeEE
Confidence 3567777764 555565555544321 2246999999996421 111 1245668888999999
Q ss_pred EcCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 559 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
+ ++.+|+|.+... .....+..+|+..+++.+ +.++++++|||+||.+|+.++.++|++++++|+.+|.
T Consensus 78 ~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 148 (315)
T 4f0j_A 78 A---VDQVGFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI 148 (315)
T ss_dssp E---ECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCS
T ss_pred E---eecCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCc
Confidence 9 556677766443 223455555555555443 3468999999999999999999999999999999986
Q ss_pred CCCCCCccCcccc-----------------------------cccc---hh---------------------hHHHHHhc
Q 004475 636 YNKTLTPFGFQTE-----------------------------FRTL---WE---------------------ATNVYIEM 662 (751)
Q Consensus 636 ~d~~~~~~~~~~~-----------------------------~~~~---~~---------------------~~~~~~~~ 662 (751)
............. .... |. ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (315)
T 4f0j_A 149 GLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQ 228 (315)
T ss_dssp CSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHC
T ss_pred ccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccc
Confidence 3211000000000 0000 00 00011122
Q ss_pred CcccccCCCCCCEEEEEcCCCCCCCCChHHH------------HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHH
Q 004475 663 SPITHANKIKKPILIIHGEVDDKVGLFPMQA------------ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 730 (751)
Q Consensus 663 ~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 730 (751)
.....+.++++|+|+++|++|..+| .... .+..+.+.+....++++++++++|... .+....+.+
T Consensus 229 ~~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~ 305 (315)
T 4f0j_A 229 PVVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQ 305 (315)
T ss_dssp CCGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHH
T ss_pred hhhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHH
Confidence 3344577889999999999999987 4433 445555555556789999999999865 556678888
Q ss_pred HHHHHHHH
Q 004475 731 ETDRWLQK 738 (751)
Q Consensus 731 ~~~~fl~~ 738 (751)
.+.+||++
T Consensus 306 ~i~~fl~~ 313 (315)
T 4f0j_A 306 ALLEGLQT 313 (315)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhcc
Confidence 88888864
No 105
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.78 E-value=7.6e-18 Score=168.53 Aligned_cols=202 Identities=17% Similarity=0.178 Sum_probs=142.1
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 589 (751)
.|+||++||.+.. ... ...+...|+++||.|++ ++.+|+|.+... ........+|+.+++
T Consensus 40 ~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~G~~v~~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGT-----------PHS----MRPLAEAYAKAGYTVCL---PRLKGHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCC-----------GGG----THHHHHHHHHTTCEEEE---CCCTTCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCC-----------hhH----HHHHHHHHHHCCCEEEE---eCCCCCCCCccccccCCHHHHHHHHHHHH
Confidence 5899999996411 111 23556788889999999 566677776321 223567789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-----------c------Ccccc----
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----------F------GFQTE---- 648 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-----------~------~~~~~---- 648 (751)
+++.++ ..+++++|||+||.+|+.++.++|+ ++++|+++|..+..... + .....
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999875 4789999999999999999999998 99999999875421100 0 00000
Q ss_pred ---cccchhhHHHHHh--cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc
Q 004475 649 ---FRTLWEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 723 (751)
Q Consensus 649 ---~~~~~~~~~~~~~--~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 723 (751)
...+......+.. ......+.++++|+|+++|++|..+| +..+..+++.+.. .+++++++|+++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 0000000000000 01223466789999999999999998 8888888877753 3679999999999987555
Q ss_pred cHHHHHHHHHHHHHHHh
Q 004475 724 NVMHVIWETDRWLQKYC 740 (751)
Q Consensus 724 ~~~~~~~~~~~fl~~~l 740 (751)
...++.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 56789999999998864
No 106
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.77 E-value=3.9e-18 Score=173.89 Aligned_cols=227 Identities=16% Similarity=0.146 Sum_probs=144.0
Q ss_pred eEEEEEE---cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475 481 KEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 557 (751)
Q Consensus 481 ~e~i~~~---~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 557 (751)
...+++. ..++..+.+++|.|.+.. .+.|+||++||+++.. ..+ .......++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~-----------~~~---~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNG-----------ADY---RDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCH-----------HHH---HHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCH-----------HHH---HHHHHHHHHHCCcEE
Confidence 3446665 567788999999997632 2479999999976321 111 113355677899999
Q ss_pred EEcCCCCC---------CCC--CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-c
Q 004475 558 LAGPSIPI---------IGE--GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-L 625 (751)
Q Consensus 558 ~~~~~~~~---------~g~--g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-~ 625 (751)
++++++.. .|+ |.+...........+|+.++++++.++..+|+++|+|+||||||.+|+.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99776521 033 33322211112334678899999998877889999999999999999999999985 7
Q ss_pred eeEEEEcc-CCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCC---------------
Q 004475 626 FCCGIARS-GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF--------------- 689 (751)
Q Consensus 626 ~~~~v~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~--------------- 689 (751)
++++|+.. |.++.......+..... . ...++......+++|+|++||+.|..+..+
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLD-G-------VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSB-T-------TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCccccC-C-------CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88888655 55442211100000000 0 001222222334689999999999874100
Q ss_pred hHHHHHHHHHHH----hCCCc--EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 690 PMQAERFFDALK----GHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 690 ~~~~~~~~~~l~----~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
...+..+++.++ +.+.+ ++++++|+++|.+. .....+.+||...
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~~ 287 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFDG 287 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhhh
Confidence 234566677665 55666 99999999999873 4456677777543
No 107
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.77 E-value=1.9e-17 Score=168.28 Aligned_cols=239 Identities=13% Similarity=0.073 Sum_probs=152.7
Q ss_pred ceEEEEEEcCC-CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 480 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~~~~~-~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
..+.+++.+.. +..+.++ +.|.. .++|+||++||++.. +....|... ......+++.||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~------~~~p~vvllHG~~~~---------~~~~~w~~~-~~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGG------ANSPALYLLDGLRAQ---------DDFSGWDIN-TPAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS------TTBCEEEEECCTTCC---------SSSCHHHHH-CCHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECCCC------CCCCEEEEeCCCCCC---------CCcchhhcC-CCHHHHHhcCCeEEE
Confidence 45677777653 4567666 44542 248999999997310 011111110 012345567899999
Q ss_pred EcCCCCCCCCCCCCC---------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 004475 559 AGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 629 (751)
Q Consensus 559 ~~~~~~~~g~g~~~~---------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 629 (751)
+++.....++..... ...+...+.++ ++.++.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 147 (304)
T 1sfr_A 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSE---LPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147 (304)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTH---HHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred EECCCCCccccccCCccccccccccccHHHHHHHH---HHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEE
Confidence 976643222211101 11222222344 444444433467789999999999999999999999999999
Q ss_pred EEccCCCCCCCCccCc------ccc----cccchh--hHHHHHhcCcccccCCC---CCCEEEEEcCCCC----------
Q 004475 630 IARSGSYNKTLTPFGF------QTE----FRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD---------- 684 (751)
Q Consensus 630 v~~~~~~d~~~~~~~~------~~~----~~~~~~--~~~~~~~~~~~~~~~~~---~~P~li~~G~~D~---------- 684 (751)
++++|.++.....+.. ... ....|. ....+...+|...+.++ ++|+++.||+.|+
T Consensus 148 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~ 227 (304)
T 1sfr_A 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPA 227 (304)
T ss_dssp EEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHH
T ss_pred EEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCcccccccccc
Confidence 9999987643211000 000 000010 11234555665555444 5899999999998
Q ss_pred ----CCCCChHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 685 ----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 685 ----~vp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
.++ ...+++++++|+++| .++++.++++++|.+. .+...+..++.||.+++...
T Consensus 228 ~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 228 KFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTCC
T ss_pred chhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCCC
Confidence 566 889999999999999 9999999987799853 35567788999999998753
No 108
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.77 E-value=2e-17 Score=160.25 Aligned_cols=197 Identities=15% Similarity=0.125 Sum_probs=137.9
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
++..+...++.|.. .+.|+||++||.+.. ...+ ......|+ .||.|++++.....+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVD-----------ETTL----VPLARRIA-PTATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBC-----------TTTT----HHHHHHHC-TTSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCC-----------HHHH----HHHHHhcC-CCceEEEeCCCCCcCCc
Confidence 34456666665543 124899999997521 1111 12344444 49999996642210001
Q ss_pred CCC--------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475 570 DKL--------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 641 (751)
Q Consensus 570 ~~~--------~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~ 641 (751)
... ..........+++.+.++++.++..+++++|+++|||+||.+|+.++.++|++++++|+++|.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 151 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV 151 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc
Confidence 110 111223455778888888887765678899999999999999999999999999999999997542110
Q ss_pred ccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc
Q 004475 642 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 721 (751)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 721 (751)
.....+++|+|++||++|..+| ...++ +++.+++.+.++++++++ ++|.+..
T Consensus 152 ------------------------~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~ 203 (223)
T 3b5e_A 152 ------------------------PATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD 203 (223)
T ss_dssp ------------------------CCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH
T ss_pred ------------------------ccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcCH
Confidence 1123467999999999999999 89999 999999988899999999 9999752
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 004475 722 RENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 722 ~~~~~~~~~~~~~fl~~~l~ 741 (751)
+..+.+.+||.+.+.
T Consensus 204 -----~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 204 -----PDAAIVRQWLAGPIA 218 (223)
T ss_dssp -----HHHHHHHHHHHCC--
T ss_pred -----HHHHHHHHHHHhhhh
Confidence 345688999987553
No 109
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.7e-16 Score=181.89 Aligned_cols=298 Identities=11% Similarity=0.068 Sum_probs=183.1
Q ss_pred ceeEEeecCCCCCCCCcccccC---CCCcc--cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~---~~~~~--~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
..||++++.+ |+.+.|.. +..+. .+..++|||||++|||.+... +....+||++++++|+.++++.
T Consensus 98 ~~l~~~~~~~----~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-----G~~~~~i~v~d~~tg~~~~~~~ 168 (710)
T 2xdw_A 98 RVLYVQDSLE----GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-----GSDWVTIKFMKVDGAKELPDVL 168 (710)
T ss_dssp CEEEEESSTT----SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-----TCSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCC----CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-----CCceEEEEEEECCCCCCCcccc
Confidence 4688888877 77765532 11221 467899999999999987531 1333599999999999877643
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
... .+..++|||||+.|+|.+........ . +... . .....+|
T Consensus 169 ~~~-----~~~~~~wspDg~~l~~~~~~~~~~~~---~---~~~~-----~----------------------~~~~~~v 210 (710)
T 2xdw_A 169 ERV-----KFSCMAWTHDGKGMFYNAYPQQDGKS---D---GTET-----S----------------------TNLHQKL 210 (710)
T ss_dssp EEE-----CSCCEEECTTSSEEEEEECCCCSSCC---S---SSCC-----C----------------------CCCCCEE
T ss_pred cCc-----ccceEEEEeCCCEEEEEEECCccccc---c---cccc-----c----------------------cCCCCEE
Confidence 221 14578999999999999764321100 0 0000 0 0022589
Q ss_pred EEEcC-CCCc--eec-CCC---ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC------c--eeeee
Q 004475 160 VLGSL-DGTA--KDF-GTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------K--LVREL 224 (751)
Q Consensus 160 ~~~~~-~G~~--~~l-t~~---~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~--~~~~l 224 (751)
|++++ +++. +.+ ... .....+.|||||++|++.+.... ....+||++|+++ + ..+.|
T Consensus 211 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC--------DPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS--------SSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred EEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC--------CCccEEEEEECcccccccCCccceEEe
Confidence 99999 5532 233 221 34668999999999999875321 1246899999976 4 34555
Q ss_pred ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC---ceEeEeece--
Q 004475 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDL-- 299 (751)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~~~-- 299 (751)
...... . ...|+|||++ |++.+..+ ..+..|++++++ +.. .+.+.....
T Consensus 283 ~~~~~~-------------~-~~~~s~dg~~-l~~~s~~~--------~~~~~l~~~d~~---~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 283 IDNFEG-------------E-YDYVTNEGTV-FTFKTNRH--------SPNYRLINIDFT---DPEESKWKVLVPEHEKD 336 (710)
T ss_dssp ECSSSS-------------C-EEEEEEETTE-EEEEECTT--------CTTCEEEEEETT---SCCGGGCEEEECCCSSC
T ss_pred eCCCCc-------------E-EEEEeccCCE-EEEEECCC--------CCCCEEEEEeCC---CCCcccceeccCCCCCC
Confidence 432211 1 2369999999 67654211 124589999986 322 355554433
Q ss_pred eEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcce
Q 004475 300 RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 378 (751)
Q Consensus 300 ~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 378 (751)
.+. +.|++++. |++.... ....+||++++.++ ...+.+... ...+.. ++++|||+.|+|....
T Consensus 337 ~~~~~~~~~~~~-lv~~~~~-~g~~~l~~~~~~~g-~~~~~l~~~-~~~v~~------~~~s~d~~~l~~~~ss------ 400 (710)
T 2xdw_A 337 VLEWVACVRSNF-LVLCYLH-DVKNTLQLHDLATG-ALLKIFPLE-VGSVVG------YSGQKKDTEIFYQFTS------ 400 (710)
T ss_dssp EEEEEEEETTTE-EEEEEEE-TTEEEEEEEETTTC-CEEEEECCC-SSEEEE------EECCTTCSEEEEEEEC------
T ss_pred eEEEEEEEcCCE-EEEEEEE-CCEEEEEEEECCCC-CEEEecCCC-CceEEE------EecCCCCCEEEEEEeC------
Confidence 566 88986554 5555533 34468999998553 222334322 111111 6789999988887622
Q ss_pred EEEEccCCCCCCCCCceeEEEecCCCc--eeEEe
Q 004475 379 YILLNGRGFTPEGNIPFLDLFDINTGS--KERIW 410 (751)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~ 410 (751)
......|+++|+.+|+ .+.+.
T Consensus 401 -----------~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 401 -----------FLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp -----------SSCCCEEEEEETTSSSCCCEEEE
T ss_pred -----------CCCCCEEEEEECCCCccceEEee
Confidence 1234589999999887 44443
No 110
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.76 E-value=5.4e-17 Score=164.64 Aligned_cols=228 Identities=11% Similarity=0.037 Sum_probs=141.8
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
++...+...+|..+.++.+.|....+ .+.|+||++||.+.. ... ...+...|+++||.|++
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~--------------~~~-~~~~~~~L~~~G~~Vi~- 67 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARR--------------MDH-FAGLAEYLSTNGFHVFR- 67 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGG--------------GGG-GHHHHHHHHTTTCCEEE-
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccC--------------chH-HHHHHHHHHHCCCEEEE-
Confidence 45566777788899999998754111 135899999996411 111 12456677889999999
Q ss_pred CCCCCCCC-CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004475 561 PSIPIIGE-GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 637 (751)
Q Consensus 561 ~~~~~~g~-g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d 637 (751)
+|.+|+ |.+... ........+|+..+++++.+.+ ..+++++||||||.+|+.+|.+ | +++++|+.++..+
T Consensus 68 --~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~ 140 (305)
T 1tht_A 68 --YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVN 140 (305)
T ss_dssp --ECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSC
T ss_pred --eeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchh
Confidence 556676 655332 2234567889999999998543 4689999999999999999988 6 7899998877533
Q ss_pred CCC-------Ccc------Ccccccccc-h-hhHHHH----Hhc------CcccccCCCCCCEEEEEcCCCCCCCCChHH
Q 004475 638 KTL-------TPF------GFQTEFRTL-W-EATNVY----IEM------SPITHANKIKKPILIIHGEVDDKVGLFPMQ 692 (751)
Q Consensus 638 ~~~-------~~~------~~~~~~~~~-~-~~~~~~----~~~------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~ 692 (751)
... ..+ ......... . .....+ ... +....+.++++|+|++||++|..+| +..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~ 218 (305)
T 1tht_A 141 LRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEE 218 (305)
T ss_dssp HHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHH
T ss_pred HHHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HHH
Confidence 100 000 000000000 0 000101 111 1223567899999999999999999 888
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCcCCccc-cHHHHHHHHHHHHHH
Q 004475 693 AERFFDALKGHGALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQK 738 (751)
Q Consensus 693 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~ 738 (751)
++++++.+.. ..++++++++++|.+...+ ...+++..+.+|...
T Consensus 219 ~~~l~~~i~~--~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~ 263 (305)
T 1tht_A 219 VYDMLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIA 263 (305)
T ss_dssp HHHHHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHH
Confidence 7777655432 3579999999999975211 122344444555443
No 111
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.75 E-value=1.4e-17 Score=164.63 Aligned_cols=180 Identities=16% Similarity=0.100 Sum_probs=129.6
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC---------CchhHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 581 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 581 (751)
+.|+||++||.+.. ...+ ......|+ .+|.|++++. +..|+|.+.. ........
T Consensus 61 ~~p~vv~~HG~~~~-----------~~~~----~~~~~~l~-~~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 61 GAPLFVLLHGTGGD-----------ENQF----FDFGARLL-PQATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp TSCEEEEECCTTCC-----------HHHH----HHHHHHHS-TTSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHH
T ss_pred CCcEEEEEeCCCCC-----------HhHH----HHHHHhcC-CCceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHH
Confidence 47999999996411 0111 12333444 4699999632 4556554321 11123344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHh
Q 004475 582 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 661 (751)
Q Consensus 582 ~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 661 (751)
.+|+.++++++.++. +.++|+++||||||.+|+.++.++|++++++|+++|..+...
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 677778888776653 678999999999999999999999999999999999764321
Q ss_pred cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 662 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 662 ~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
......+++|+|+++|++|..+| ...++++++.+++.+.++++ ++++++|.+. .+..+.+.+||.++++
T Consensus 181 ---~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ---KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ---CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ---cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 01123467999999999999998 99999999999987777776 6667899874 2456789999998875
No 112
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.75 E-value=4.1e-17 Score=167.78 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=95.1
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcC
Q 004475 602 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGE 681 (751)
Q Consensus 602 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~ 681 (751)
+++++||||||.+++.++.++|++++++|+++|... ..+......+++|+|++||+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~~~~~~~~~~PvLii~G~ 254 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKPEDVKPLTSIPVLVVFGD 254 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCGGGCGGGTTSCEEEEECS
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCHHHHhhccCCCEEEEecc
Confidence 899999999999999999999999999999997531 00011122357999999999
Q ss_pred CCCCCCCCh-----HHHHHHHHHHHhCCCcEEEEEeCCCC-----CcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 682 VDDKVGLFP-----MQAERFFDALKGHGALSRLVLLPFEH-----HVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 682 ~D~~vp~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+|..+| . ..++.+++.+.+.+.+++++++++++ |.+....+..++.+.+.+||++++.+
T Consensus 255 ~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 255 HIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp SCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC-
T ss_pred CCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcccC
Confidence 999998 7 88999999999988899999999665 99875555788999999999998753
No 113
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.75 E-value=1.4e-16 Score=164.82 Aligned_cols=246 Identities=14% Similarity=0.137 Sum_probs=153.8
Q ss_pred CCceEEEEEEcCC--C--ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-h
Q 004475 478 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-A 552 (751)
Q Consensus 478 ~~~~e~i~~~~~~--~--~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 552 (751)
.....+|.|.+.+ | ..+.++++.|.+. +++.|+|++.||.+. ... +.|.............|+ +
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~--~~~-----~~ps~~~~~~~~~~~~lal~ 108 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRF--ERN-----DVPSRNNEKNYIYLAAYGNS 108 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCC--STT-----CSGGGCCGGGHHHHHHHTTT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcC--Ccc-----cCCCcCcccchHHHHHHHHh
Confidence 3467778888765 3 3588999999863 246899999999752 111 111110001123445677 9
Q ss_pred CCeEEEEcCCCCCCCCCCCCC-Cchh--HH---HHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhCCC-
Q 004475 553 RRFAVLAGPSIPIIGEGDKLP-NDRF--VE---QLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHAPH- 624 (751)
Q Consensus 553 ~G~~v~~~~~~~~~g~g~~~~-~~~~--~~---~~~~d~~~~v~~l~~-~~~id~~~i~l~G~S~GG~~a~~~a~~~p~- 624 (751)
+||+|+++ +++|+|.+.. ...+ .. ..+.|..+++..+.+ .+..+..+|+++||||||++++.++...|+
T Consensus 109 ~Gy~Vv~~---D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~ 185 (377)
T 4ezi_A 109 AGYMTVMP---DYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKE 185 (377)
T ss_dssp TCCEEEEE---CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe---CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhh
Confidence 99999994 4556665432 1111 11 223333333333333 333356899999999999999999887543
Q ss_pred ----ceeEEEEccCCCCCCCC----------c---c-C--------ccccc-------ccc-------------------
Q 004475 625 ----LFCCGIARSGSYNKTLT----------P---F-G--------FQTEF-------RTL------------------- 652 (751)
Q Consensus 625 ----~~~~~v~~~~~~d~~~~----------~---~-~--------~~~~~-------~~~------------------- 652 (751)
.++++++.++++|.... . + + +.... ...
T Consensus 186 ~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 265 (377)
T 4ezi_A 186 YPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEIL 265 (377)
T ss_dssp CTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHH
T ss_pred CCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhh
Confidence 58899998887662100 0 0 0 00000 000
Q ss_pred ---------hhhHHHH---Hh-cCc-cc--------ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475 653 ---------WEATNVY---IE-MSP-IT--------HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 710 (751)
Q Consensus 653 ---------~~~~~~~---~~-~~~-~~--------~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~ 710 (751)
+-..... .. ..+ +. .-.++++|+|++||++|.+|| +.++.++++++++.|. ++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~~ 342 (377)
T 4ezi_A 266 QALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVWI 342 (377)
T ss_dssp HHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEEE
T ss_pred hccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEEE
Confidence 0000000 00 011 10 012467999999999999999 9999999999999999 9999
Q ss_pred EeCC--CCCcCCccccHHHHHHHHHHHHHHHhcCCC
Q 004475 711 LLPF--EHHVYAARENVMHVIWETDRWLQKYCLSNT 744 (751)
Q Consensus 711 ~~~~--~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 744 (751)
++++ .+|... .......+++||++++.+..
T Consensus 343 ~~~~~~~~H~~~----~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 343 KSVSDALDHVQA----HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp EESCSSCCTTTT----HHHHHHHHHHHHHHHHTSSC
T ss_pred EcCCCCCCccCh----HHHHHHHHHHHHHHhhcchh
Confidence 9999 899754 34677889999999987644
No 114
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=2.9e-16 Score=179.35 Aligned_cols=294 Identities=12% Similarity=0.030 Sum_probs=182.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCC---c--ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPD---G--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~---~--~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
..||+++..+ |+.+.|+.... + ..+..++|||||++|||+.... +....+|+++++++|+..+...
T Consensus 94 ~~l~~~~~~~----~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~-----G~~~~~i~v~dl~tg~~~~~~~ 164 (695)
T 2bkl_A 94 AILYWRQGES----GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN-----AADEAVLHVIDVDSGEWSKVDV 164 (695)
T ss_dssp CEEEEEESTT----SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-----TCSCCEEEEEETTTCCBCSSCC
T ss_pred EEEEEEcCCC----CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-----CCceEEEEEEECCCCCCcCCcc
Confidence 4589999877 88888864221 1 1478899999999999987532 1345799999999998652211
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
.... ....++|||||+.|+|.+.+..... ... ......+|
T Consensus 165 ~~~~----~~~~~~wspDg~~l~~~~~d~~~~~---------~~~---------------------------~~~~~~~v 204 (695)
T 2bkl_A 165 IEGG----KYATPKWTPDSKGFYYEWLPTDPSI---------KVD---------------------------ERPGYTTI 204 (695)
T ss_dssp BSCC----TTCCCEECTTSSEEEEEECCCCTTS---------CGG---------------------------GGGGGCEE
T ss_pred cCcc----cccceEEecCCCEEEEEEecCCCCC---------ccc---------------------------cCCCCCEE
Confidence 1111 1257899999999999976432110 000 00022689
Q ss_pred EEEcC-CCC--ceecCCC----ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC
Q 004475 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (751)
Q Consensus 160 ~~~~~-~G~--~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (751)
|++++ +++ .+.+... ..+..+.|||||++|++.+.... ...+||+++..+++.++|......
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~~~-- 273 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW---------SENDVYWKRPGEKDFRLLVKGVGA-- 273 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---------TEEEEEEECTTCSSCEEEEECSSC--
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---------CceEEEEEcCCCCceEEeecCCCc--
Confidence 99999 554 2344322 35678999999999999876531 146799998877767766543321
Q ss_pred CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC---ceEeEee--ceeEE-EEEe
Q 004475 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKL--DLRFS-VSWC 306 (751)
Q Consensus 233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~--~~~~~-~~~s 306 (751)
.....| |||+ +++. +.. ......|++++++ +.. .+.+... ...+. +.|+
T Consensus 274 -----------~~~~~~-~~g~-l~~~-s~~--------~~~~~~l~~~d~~---~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 274 -----------KYEVHA-WKDR-FYVL-TDE--------GAPRQRVFEVDPA---KPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp -----------CEEEEE-ETTE-EEEE-ECT--------TCTTCEEEEEBTT---BCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred -----------eEEEEe-cCCc-EEEE-ECC--------CCCCCEEEEEeCC---CCCccCCeEEecCCCCCeEEEEEEE
Confidence 123345 7887 4444 311 1134689999985 333 2455543 33456 7887
Q ss_pred cCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCC
Q 004475 307 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 386 (751)
Q Consensus 307 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~ 386 (751)
++ .|++.... ....+||+++++++ ..+.+.......+.. ++++|||+.|++.....
T Consensus 329 -~~-~lv~~~~~-dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~------------- 384 (695)
T 2bkl_A 329 -GG-HLSLEYLK-DATSEVRVATLKGK--PVRTVQLPGVGAASN------LMGLEDLDDAYYVFTSF------------- 384 (695)
T ss_dssp -TT-EEEEEEEE-TTEEEEEEEETTCC--EEEECCCSSSSEECC------CBSCTTCSEEEEEEEET-------------
T ss_pred -CC-EEEEEEEE-CCEEEEEEEeCCCC--eeEEecCCCCeEEEE------eecCCCCCEEEEEEcCC-------------
Confidence 44 45555533 34578999998653 233333211111112 66899999888877321
Q ss_pred CCCCCCCceeEEEecCCCceeEEee
Q 004475 387 FTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 387 ~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
.....|++||+.+++.+.+..
T Consensus 385 ----~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 385 ----TTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp ----TEEEEEEEEETTTCCEEEEEE
T ss_pred ----CCCCEEEEEECCCCcEEEEec
Confidence 223479999999988766544
No 115
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.75 E-value=3.1e-16 Score=157.12 Aligned_cols=280 Identities=9% Similarity=0.075 Sum_probs=192.5
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 115 (751)
--+++||.+|+|... .+...||.|+.++++.++|+... .--++++|++|+|..........
T Consensus 19 g~~~~~g~~iy~~n~--------~d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~~~-- 79 (302)
T 3s25_A 19 GLFCESDGEVFFSNT--------NDNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKITS-- 79 (302)
T ss_dssp TCEEEETTEEEEEEG--------GGTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC-------
T ss_pred eEEEEeCCEEEEEeC--------CCCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcccc--
Confidence 357899999999653 23478999999999999996532 12568999999999654221100
Q ss_pred CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCCceEEeeeeCCCCceEEEEEe
Q 004475 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSM 194 (751)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~~~~~~~~~SpDG~~i~~~~~ 194 (751)
...| ......|+.++++| +.++|++... ..|+++|++|+|+..
T Consensus 80 --------------------------------~~~~-~~n~~~Iy~i~~dg~~~~~l~~~~~---~~~s~~g~~Iy~~~~ 123 (302)
T 3s25_A 80 --------------------------------QTFF-SYDRNSLCRIKRNGHGSTVLDPDPC---IYASLIGNYIYYLHY 123 (302)
T ss_dssp ---------------------------------CCS-SCCSEEEEEEETTSCCCEEEECSCE---EEEEEETTEEEEEEE
T ss_pred --------------------------------ccee-ccCCCeEEEEeCCCCcceEeecCCc---cEEEEeCCEEEEEee
Confidence 0000 00226899999977 6667765422 378999999999862
Q ss_pred cCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCc
Q 004475 195 HRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSP 274 (751)
Q Consensus 195 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~ 274 (751)
.+ .....||+.++++...++|+.... ..++|+|+. |+|++. .
T Consensus 124 ~~---------~~~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~-iy~t~~-----------g 165 (302)
T 3s25_A 124 DT---------QTATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRY-FYYNNP-----------K 165 (302)
T ss_dssp SS---------SSCEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTE-EEEECT-----------T
T ss_pred cC---------CCCceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCE-EEEEeC-----------C
Confidence 11 014679999999988888866532 267899999 999751 3
Q ss_pred ccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCC
Q 004475 275 RDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 353 (751)
Q Consensus 275 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 353 (751)
+.+||+++++ ++..+.|... ... + ++|+|++|+|+.... ..+|++++++++ ..++|+....
T Consensus 166 ~~~Iy~~~l~---g~~~~~l~~~--~~~~~-~~P~g~~iy~t~~~~--~~~I~~~~ldG~--~~~~Lt~~~~-------- 227 (302)
T 3s25_A 166 NGQLYRYDTA---SQSEALFYDC--NCYKP-VVLDDTNVYYMDVNR--DNAIVHVNINNP--NPVVLTEANI-------- 227 (302)
T ss_dssp TCCEEEEETT---TTEEEEEECS--CEEEE-EEEETTEEEEEEGGG--TTEEEEECSSSC--CCEECSCSCE--------
T ss_pred CceEEEEECC---CCCEEEEeCC--Cccce-eeecCCEEEEEEcCC--CcEEEEEECCCC--CeEEEeCCCc--------
Confidence 4689999986 6666666542 233 4 459999999987542 258999999994 5567764321
Q ss_pred CCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceee
Q 004475 354 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 433 (751)
Q Consensus 354 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 433 (751)
+.|+|+|++|+|.... ....|+++++++...++|...+. .++
T Consensus 228 ---~~~~~~g~~Iy~~~~~-------------------~~~~i~~~~~DG~~r~~l~~~~~----------------~~i 269 (302)
T 3s25_A 228 ---EHYNVYGSLIFYQRGG-------------------DNPALCVVKNDGTGFKELAKGEF----------------CNI 269 (302)
T ss_dssp ---EEEEEETTEEEEEECS-------------------SSCEEEEEETTSCCCEEEEESCE----------------EEE
T ss_pred ---ceEEECCCEEEEEECC-------------------CCcEEEEEECCCCccEEeeCCcc----------------ceE
Confidence 4589999999887621 12589999998777777754321 145
Q ss_pred ccCCCEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 004475 434 NLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 467 (751)
Q Consensus 434 s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt 467 (751)
++-+.+|+|+..... .|+++.+++...++|.
T Consensus 270 ~i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 270 NVTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp EECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred EEeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 567889999875433 4999998765555554
No 116
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.75 E-value=5.3e-17 Score=162.47 Aligned_cols=212 Identities=11% Similarity=0.149 Sum_probs=136.0
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 573 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~ 573 (751)
+...+|.|.+ ++.|+|||+|||||..++. ..+ .......+++.||.|++++|+ +.++
T Consensus 15 ~~~~~y~p~~------~~~p~iv~~HGGg~~~g~~--------~~~---~~~~~~~l~~~g~~Vi~vdYr---laPe--- 71 (274)
T 2qru_A 15 ATVTIYPTTT------EPTNYVVYLHGGGMIYGTK--------SDL---PEELKELFTSNGYTVLALDYL---LAPN--- 71 (274)
T ss_dssp CEEEEECCSS------SSCEEEEEECCSTTTSCCG--------GGC---CHHHHHHHHTTTEEEEEECCC---CTTT---
T ss_pred eeEEEEcCCC------CCCcEEEEEeCccccCCCh--------hhc---hHHHHHHHHHCCCEEEEeCCC---CCCC---
Confidence 4557777753 2379999999998754322 111 122344567889999997775 3221
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEccCCCCCCCCcc----Ccc
Q 004475 574 NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLTPF----GFQ 646 (751)
Q Consensus 574 ~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~~~~d~~~~~~----~~~ 646 (751)
..++..++|+.++++|+.++.. ++++|+|+|+|+||++|+.++. ..+..++++++++|..+...... ..+
T Consensus 72 --~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~ 148 (274)
T 2qru_A 72 --TKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQ 148 (274)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSS
T ss_pred --CCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccc
Confidence 2346779999999999987642 2689999999999999999987 34667889998888765211100 000
Q ss_pred ---c---------c--cccchhh-H------------HHHHhc-C-------cc--cccCCCCCCEEEEEcCCCCCCCCC
Q 004475 647 ---T---------E--FRTLWEA-T------------NVYIEM-S-------PI--THANKIKKPILIIHGEVDDKVGLF 689 (751)
Q Consensus 647 ---~---------~--~~~~~~~-~------------~~~~~~-~-------~~--~~~~~~~~P~li~~G~~D~~vp~~ 689 (751)
. . ....+.. . ..+... . ++ ..+.++ +|+||++|+.|+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~-- 225 (274)
T 2qru_A 149 AISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVP-- 225 (274)
T ss_dssp CCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSC--
T ss_pred cccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcC--
Confidence 0 0 0000000 0 001000 0 01 123445 799999999999988
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc---ccHHHHHHHHHHHHHH
Q 004475 690 PMQAERFFDALKGHGALSRLVLLPFEHHVYAAR---ENVMHVIWETDRWLQK 738 (751)
Q Consensus 690 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~ 738 (751)
...++.+.+++ .+++++++++++|.+... +...++++.+.+||.+
T Consensus 226 ~~~~~~l~~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 226 FRYSKKIGRTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp THHHHHHHHHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 77776666554 457999999999998532 1223567888899864
No 117
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.75 E-value=2.1e-17 Score=153.42 Aligned_cols=173 Identities=12% Similarity=0.082 Sum_probs=123.8
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 590 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 590 (751)
+.|+||++||.+. +...+. ...+...|+++||.|++ .+++|+|.+.... ......+++..+++
T Consensus 3 ~~~~vv~~HG~~~-----------~~~~~~--~~~~~~~l~~~g~~v~~---~d~~g~g~s~~~~-~~~~~~~~~~~~~~ 65 (176)
T 2qjw_A 3 SRGHCILAHGFES-----------GPDALK--VTALAEVAERLGWTHER---PDFTDLDARRDLG-QLGDVRGRLQRLLE 65 (176)
T ss_dssp SSCEEEEECCTTC-----------CTTSHH--HHHHHHHHHHTTCEEEC---CCCHHHHTCGGGC-TTCCHHHHHHHHHH
T ss_pred CCcEEEEEeCCCC-----------CccHHH--HHHHHHHHHHCCCEEEE---eCCCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 3689999999641 111111 11455677889999999 4555665543211 11223445556667
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCC
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 670 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (751)
++.+.. +..+++++|||+||.+|+.++.++| ++++|+.+|..+.... ..+.+
T Consensus 66 ~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------------~~~~~ 117 (176)
T 2qjw_A 66 IARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------------PALDA 117 (176)
T ss_dssp HHHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------------CCCCC
T ss_pred HHHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------------Ccccc
Confidence 776653 3478999999999999999999997 9999999987543210 00456
Q ss_pred CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 671 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 671 ~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+++|+|+++|++|..+| ...++++++.+ +++++++ +++|.+ .+...++.+.+.+||++
T Consensus 118 ~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 118 AAVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CSSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 78999999999999999 89998888877 3578888 889997 36677888888888863
No 118
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=1.4e-17 Score=186.63 Aligned_cols=264 Identities=10% Similarity=0.007 Sum_probs=169.6
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEc--CCCCeeeccCCCCc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDI 83 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~--~~g~~~~lt~~~~~ 83 (751)
.+.+|++.+ |+.++++.... ..+..|+|||| +++|++..+ ......+||++++ +++. ++++....
T Consensus 45 ~~~lw~~~~----g~~~~lt~~~~-~~~~~~~~spd--~~l~~~~~~----~g~~~~~l~~~~~~~~g~~-~~l~~~~~- 111 (582)
T 3o4h_A 45 SVNAYLYDG----GETVKLNREPI-NSVLDPHYGVG--RVILVRDVS----KGAEQHALFKVNTSRPGEE-QRLEAVKP- 111 (582)
T ss_dssp EEEEEEEET----TEEEECCSSCC-SEECEECTTCS--EEEEEEECS----TTSCCEEEEEEETTSTTCC-EECTTSCS-
T ss_pred ceeEEEEcC----CCcEeeecccc-cccccccCCCC--eEEEEeccC----CCCcceEEEEEeccCCCcc-ccccCCCC-
Confidence 355666777 88999884332 25789999999 688876421 1134568999998 5544 47765543
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
....+|||||+.++|.+... ..+++++
T Consensus 112 -----~~~~~~s~dg~~~~~~s~~~------------------------------------------------~~~~l~d 138 (582)
T 3o4h_A 112 -----MRILSGVDTGEAVVFTGATE------------------------------------------------DRVALYA 138 (582)
T ss_dssp -----BEEEEEEECSSCEEEEEECS------------------------------------------------SCEEEEE
T ss_pred -----ceeeeeCCCCCeEEEEecCC------------------------------------------------CCceEEE
Confidence 34569999999988875421 1233557
Q ss_pred C-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccC
Q 004475 164 L-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (751)
Q Consensus 164 ~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~ 242 (751)
+ +|+.++++.... ..++|||||++|++.+.+.. ....||+||+++++.++|+.....
T Consensus 139 ~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~---------~~~~i~~~d~~~g~~~~l~~~~~~------------ 196 (582)
T 3o4h_A 139 LDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGG---------GRVSLFTSNLSSGGLRVFDSGEGS------------ 196 (582)
T ss_dssp EETTEEEEEEEESS-CEEEEEEETTEEEEEEEEET---------TEEEEEEEETTTCCCEEECCSSCE------------
T ss_pred ccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCC---------CCeEEEEEcCCCCCceEeecCCCc------------
Confidence 7 677777775533 78999999999998776532 024699999998888877554332
Q ss_pred CCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EE--------EecCCceEE
Q 004475 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VS--------WCDDSLALV 313 (751)
Q Consensus 243 ~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~--------~spdg~~l~ 313 (751)
+..++|||||+. |+..+ . ....+|++++++ ++..+.+......+. +. ||||| .++
T Consensus 197 -~~~~~~SpDG~~-l~~~~-~---------~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~ 260 (582)
T 3o4h_A 197 -FSSASISPGMKV-TAGLE-T---------AREARLVTVDPR---DGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLA 260 (582)
T ss_dssp -EEEEEECTTSCE-EEEEE-C---------SSCEEEEEECTT---TCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEE
T ss_pred -cccceECCCCCE-EEEcc-C---------CCeeEEEEEcCC---CCcEEEccCCCcChhhhhhccccceeEcCCC-cEE
Confidence 347899999998 66322 1 112379999986 555554333333344 55 99999 677
Q ss_pred EeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCC
Q 004475 314 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNI 393 (751)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (751)
++...+ +...||.+ +. ........... ++|| ||+.++..+.. ...
T Consensus 261 ~~~~~~-g~~~l~~~---g~---~~~~~~~~v~~---------~~~s-dg~~l~~~s~~------------------~~p 305 (582)
T 3o4h_A 261 VVARRE-GRSAVFID---GE---RVEAPQGNHGR---------VVLW-RGKLVTSHTSL------------------STP 305 (582)
T ss_dssp EEEEET-TEEEEEET---TE---EECCCSSEEEE---------EEEE-TTEEEEEEEET------------------TEE
T ss_pred EEEEcC-CcEEEEEE---CC---eeccCCCceEE---------EEec-CCEEEEEEcCC------------------CCC
Confidence 766443 34567766 31 11111111111 7799 99877665522 234
Q ss_pred ceeEEEecCCCceeEE
Q 004475 394 PFLDLFDINTGSKERI 409 (751)
Q Consensus 394 ~~l~~~d~~~g~~~~l 409 (751)
..|+++++.+ +.++|
T Consensus 306 ~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 306 PRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEEETTCC-EEECC
T ss_pred CeEEEEcCCC-ceEEE
Confidence 4788888765 54444
No 119
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.74 E-value=1.3e-15 Score=170.44 Aligned_cols=279 Identities=13% Similarity=0.155 Sum_probs=181.7
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~ 85 (751)
.|++|+..+ ...+.+.+ ....+...+|||||+.|+... ....|.+++..+.+.+.+.....
T Consensus 285 ~i~~w~~~~----~~~~~~~~--h~~~v~~~~~~~~~~~l~t~~----------~d~~i~~w~~~~~~~~~~~~~~~--- 345 (577)
T 2ymu_A 285 TVKLWNRNG----QLLQTLTG--HSSSVWGVAFSPDGQTIASAS----------DDKTVKLWNRNGQHLQTLTGHSS--- 345 (577)
T ss_dssp CEEEEETTS----CEEEEECC--CSSCEEEEEECTTSSEEEEEE----------TTSCEEEEETTSCEEEEECCCSS---
T ss_pred EEEEEeCCC----cEEEEEec--CCCCeEEEEECCCCCEEEEEe----------CCCeEEEEeCCCCeeEEEeCCCC---
Confidence 577888755 44444542 223577889999999998864 23567777877766666643332
Q ss_pred cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC
Q 004475 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (751)
Q Consensus 86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (751)
.+..++|+|||+.|+....+ ..+.+++.+
T Consensus 346 --~v~~~~~s~~g~~l~~~~~d-------------------------------------------------g~v~~~~~~ 374 (577)
T 2ymu_A 346 --SVWGVAFSPDGQTIASASDD-------------------------------------------------KTVKLWNRN 374 (577)
T ss_dssp --CEEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEETT
T ss_pred --CEEEEEECCCCCEEEEEeCC-------------------------------------------------CEEEEEcCC
Confidence 36788999999999887432 356667776
Q ss_pred C-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (751)
Q Consensus 166 G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (751)
+ ....+..+ ..+..++|||||++|+....+ ..+.+|+..+...+.+..+. ..
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-------------~~v~~~~~~~~~~~~~~~~~-------------~~ 428 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SS 428 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------SEEEEECTTCCEEEEEECCS-------------SC
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEeCC-------------CEEEEEeCCCCEEEEecCCC-------------CC
Confidence 6 34445544 678899999999999876543 35888998766555543322 23
Q ss_pred CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccc
Q 004475 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
+..++|+||++. |+..+ ..+.|.+++.. +.....+......+. ++|||||+.|+.... .
T Consensus 429 v~~~~~s~d~~~-l~~~~------------~d~~v~~w~~~---~~~~~~~~~~~~~v~~~~~spd~~~las~~~----d 488 (577)
T 2ymu_A 429 VWGVAFSPDDQT-IASAS------------DDKTVKLWNRN---GQLLQTLTGHSSSVRGVAFSPDGQTIASASD----D 488 (577)
T ss_dssp EEEEEECTTSSE-EEEEE------------TTSEEEEEETT---SCEEEEEECCSSCEEEEEECTTSCEEEEEET----T
T ss_pred eEEEEECCCCCE-EEEEc------------CCCEEEEEECC---CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC----C
Confidence 557899999998 55543 23578888874 545556666667777 999999999887652 2
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 402 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 402 (751)
..|.+.+.++ ...+.+. .....+.. ++|||||++|+..+.+ ..|++||..
T Consensus 489 ~~i~iw~~~~--~~~~~~~-~h~~~v~~------l~~s~dg~~l~s~~~d---------------------g~v~lwd~~ 538 (577)
T 2ymu_A 489 KTVKLWNRNG--QLLQTLT-GHSSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRN 538 (577)
T ss_dssp SEEEEEETTS--CEEEEEE-CCSSCEEE------EEECTTSSCEEEEETT---------------------SEEEEECTT
T ss_pred CEEEEEcCCC--CEEEEEe-CCCCCEEE------EEEcCCCCEEEEEECc---------------------CEEEEEeCC
Confidence 3455556544 2222232 22222222 7899999999887732 268888974
Q ss_pred CCce-eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEE
Q 004475 403 TGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 403 ~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
++. ..+..... .+.. ++|||||+.|+-.
T Consensus 539 -~~~~~~~~~h~~-----~v~~-------~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 539 -GQLLQTLTGHSS-----SVWG-------VAFSPDGQTIASA 567 (577)
T ss_dssp -SCEEEEEECCSS-----CEEE-------EEECTTSSCEEEE
T ss_pred -CCEEEEEcCCCC-----CEEE-------EEEcCCCCEEEEE
Confidence 443 33322221 1222 5899999987643
No 120
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.74 E-value=1.6e-16 Score=160.27 Aligned_cols=204 Identities=14% Similarity=0.115 Sum_probs=134.6
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCC--C-CchHHHHHHhC---
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG--M-TPTSSLIFLAR--- 553 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~--- 553 (751)
..+.+++.+.++ .+.+++|+|+++.+. +++|+||++||++... ..+.. . .......|+++
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~--~~~Pvlv~lHG~~~~~-----------~~~~~~~~~~~~~~~~l~~~g~~ 105 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPN--KKYNIFYLMHGGGENE-----------NTIFSNDVKLQNILDHAIMNGEL 105 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTT--SCCEEEEEECCTTCCT-----------TSTTSTTTCHHHHHHHHHHTTSS
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCC--CCCCEEEEECCCCCCc-----------chhhcccchHHHHHHHHHHcCCC
Confidence 467888887765 899999999987653 3599999999975211 11111 0 11334566666
Q ss_pred -CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCC------------CCCCcEEEEEeChHHHHHHHHHH
Q 004475 554 -RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV------------ADPSRIAVGGHSYGAFMTAHLLA 620 (751)
Q Consensus 554 -G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~------------id~~~i~l~G~S~GG~~a~~~a~ 620 (751)
+|+|++++.++.. .....+...+.+++. .++.+... .|+.+++|+|+||||++|+.++.
T Consensus 106 ~~~ivv~pd~~~~~-----~~~~~~~~~~~~~l~---~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~ 177 (297)
T 1gkl_A 106 EPLIVVTPTFNGGN-----CTAQNFYQEFRQNVI---PFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMV 177 (297)
T ss_dssp CCEEEEECCSCSTT-----CCTTTHHHHHHHTHH---HHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHH
T ss_pred CCEEEEEecCcCCc-----cchHHHHHHHHHHHH---HHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHH
Confidence 5999996654221 122334444445444 44444322 36678999999999999999999
Q ss_pred hCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475 621 HAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 700 (751)
Q Consensus 621 ~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l 700 (751)
++|++|+++++++|.+...... . ........+.. ...+.....++++.+|+.|.. ...++++.++|
T Consensus 178 ~~p~~f~~~v~~sg~~~~~~~~-----~--~~~~~~~~~~~---~~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~~L 243 (297)
T 1gkl_A 178 NCLDYVAYFMPLSGDYWYGNSP-----Q--DKANSIAEAIN---RSGLSKREYFVFAATGSEDIA----YANMNPQIEAM 243 (297)
T ss_dssp HHTTTCCEEEEESCCCCBSSSH-----H--HHHHHHHHHHH---HHTCCTTSCEEEEEEETTCTT----HHHHHHHHHHH
T ss_pred hCchhhheeeEeccccccCCcc-----c--hhhhHHHHHHh---hccCCcCcEEEEEEeCCCccc----chhHHHHHHHH
Confidence 9999999999999975422100 0 00001111111 111223346778889999976 56788999999
Q ss_pred HhCC----------CcEEEEEeCCCCCcC
Q 004475 701 KGHG----------ALSRLVLLPFEHHVY 719 (751)
Q Consensus 701 ~~~~----------~~~~~~~~~~~~H~~ 719 (751)
++.+ .++++.++|+++|.+
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 244 KALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HTSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHcCCccccccccCCceEEEECCCCCcCH
Confidence 9988 589999999999975
No 121
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=2.4e-16 Score=164.07 Aligned_cols=286 Identities=12% Similarity=-0.007 Sum_probs=158.6
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~ 85 (751)
+|+++.++. .+|+.+.+............+|||||+ |+++... .....|+++++++++.+++.......
T Consensus 17 ~i~v~~~d~--~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~-------~~~~~v~~~~~~~g~~~~~~~~~~~~- 85 (347)
T 3hfq_A 17 GIYQGTLDT--TAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE-------DDEGGIAAWQIDGQTAHKLNTVVAPG- 85 (347)
T ss_dssp EEEEEEEET--TTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE-------TTEEEEEEEEEETTEEEEEEEEEEES-
T ss_pred CEEEEEEcC--CCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec-------CCCceEEEEEecCCcEEEeeeeecCC-
Confidence 466666654 448777655333333567889999999 7665421 23478999999888877765421110
Q ss_pred cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC
Q 004475 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (751)
Q Consensus 86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (751)
.....++|||||++|++..... ..-.+|.++.+
T Consensus 86 -~~p~~~a~spdg~~l~~~~~~~----------------------------------------------~~v~v~~~~~~ 118 (347)
T 3hfq_A 86 -TPPAYVAVDEARQLVYSANYHK----------------------------------------------GTAEVMKIAAD 118 (347)
T ss_dssp -CCCSEEEEETTTTEEEEEETTT----------------------------------------------TEEEEEEECTT
T ss_pred -CCCEEEEECCCCCEEEEEeCCC----------------------------------------------CEEEEEEeCCC
Confidence 1246789999999998874311 00233433334
Q ss_pred CCceecCC------------C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-CceeeeeccCCCCC
Q 004475 166 GTAKDFGT------------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAE 231 (751)
Q Consensus 166 G~~~~lt~------------~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~ 231 (751)
|..+.+.. . ..+..++|||||+ +++.... ...+++|+++ +++...+......
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~- 184 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG------------SDKVYVYNVSDAGQLSEQSVLTME- 184 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT------------TTEEEEEEECTTSCEEEEEEEECC-
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC------------CCEEEEEEECCCCcEEEeeeEEcC-
Confidence 43332211 0 2356799999999 6665332 2368888887 4544433211111
Q ss_pred CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe---ec------eeEE
Q 004475 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LD------LRFS 302 (751)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~~------~~~~ 302 (751)
...+++.++|+|||++ ++++.. ..+.+.+++++.. ++....+.. .. ....
T Consensus 185 --------~g~~p~~~~~spdg~~-l~v~~~-----------~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 185 --------AGFGPRHLVFSPDGQY-AFLAGE-----------LSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp --------TTCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEE
T ss_pred --------CCCCCceEEECCCCCE-EEEEeC-----------CCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcce
Confidence 1123457899999998 666431 1235566655311 122222211 11 2345
Q ss_pred -EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEE
Q 004475 303 -VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 381 (751)
Q Consensus 303 -~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~ 381 (751)
++|||||++|+++... . ..|.+++++.. +..+.+........ ....++|||||++|++...+
T Consensus 244 ~i~~spdG~~l~v~~~~-~--~~v~v~~~~~~-g~~~~~~~~~~~~~----~~~~~~~spdg~~l~v~~~~--------- 306 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRG-Y--NTLAVFAVTAD-GHLTLIQQISTEGD----FPRDFDLDPTEAFVVVVNQN--------- 306 (347)
T ss_dssp EEEECTTSCEEEEEEET-T--TEEEEEEECGG-GCEEEEEEEECSSS----CCCEEEECTTSSEEEEEETT---------
T ss_pred eEEECCCCCEEEEEeCC-C--CEEEEEEECCC-CcEEEeEEEecCCC----CcCeEEECCCCCEEEEEEcC---------
Confidence 8999999988765532 2 34445554321 12223222111100 11128899999999887721
Q ss_pred EccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 382 LNGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 382 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
.....+|.+|.++|+.+.+-
T Consensus 307 ---------~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 307 ---------TDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ---------TTEEEEEEECTTTCCEEEEE
T ss_pred ---------CCcEEEEEEeCCCCeEEecc
Confidence 12234555588888877653
No 122
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.74 E-value=7.1e-17 Score=161.81 Aligned_cols=237 Identities=12% Similarity=0.096 Sum_probs=151.9
Q ss_pred CCceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475 478 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 556 (751)
Q Consensus 478 ~~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 556 (751)
....+.+++.+. .+..+.++ |+|++ .|+||++||++.. +....|... ......++++||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~---------~~~~~w~~~-~~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAG---------PDVSNWVTA-GNAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCC---------SSSCHHHHT-SCHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCC---------CChhhhhhc-ccHHHHHhcCCeE
Confidence 345778888764 56788888 77864 2799999997410 000111110 0123456678999
Q ss_pred EEEcCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475 557 VLAGPSIPIIGEGD--KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 634 (751)
Q Consensus 557 v~~~~~~~~~g~g~--~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 634 (751)
|++++.....++.. ......+.....+| ++.++.++..+++++++|+|+||||++|+.++.++|++|+++++++|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAE---LPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTH---HHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHH---HHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 99976633222211 11112233333344 44455454447778999999999999999999999999999999999
Q ss_pred CCCCCCCccC------ccc----ccccchhh--HHHHHhcCcccccCCC---CCCEEEEE----cCCCCC-------CCC
Q 004475 635 SYNKTLTPFG------FQT----EFRTLWEA--TNVYIEMSPITHANKI---KKPILIIH----GEVDDK-------VGL 688 (751)
Q Consensus 635 ~~d~~~~~~~------~~~----~~~~~~~~--~~~~~~~~~~~~~~~~---~~P~li~~----G~~D~~-------vp~ 688 (751)
.++....... ... .....|.. ...+.+.+|..+++++ ++|+++.| |+.|.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~- 224 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA- 224 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH-
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH-
Confidence 8764321000 000 00000111 1233445565545444 58999999 999983 56
Q ss_pred ChHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 689 FPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 689 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
...+++++++|++.+ .++++.++++++|.+. .+...+...+.||.+-+.
T Consensus 225 -~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 -MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp -HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHHHHh
Confidence 899999999999999 9999999988899853 355666777788776654
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.74 E-value=3.5e-15 Score=160.40 Aligned_cols=324 Identities=10% Similarity=0.030 Sum_probs=194.5
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc-c
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-C 84 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~-~ 84 (751)
.||+++..+ +..+.+..++.+......+||| +..++++. .....|+++++++++..+....... .
T Consensus 102 ~l~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~---------~~~~~i~~~d~~~g~~~~~~~~~~~~~ 167 (433)
T 3bws_A 102 KLIALDKEG----ITHRFISRFKTGFQPKSVRFID-NTRLAIPL---------LEDEGMDVLDINSGQTVRLSPPEKYKK 167 (433)
T ss_dssp CEEECCBTT----CSEEEEEEEECSSCBCCCEESS-SSEEEEEB---------TTSSSEEEEETTTCCEEEECCCHHHHT
T ss_pred EEEEECCCC----CcceEEEEEcCCCCceEEEEeC-CCeEEEEe---------CCCCeEEEEECCCCeEeeecCcccccc
Confidence 566666655 5444444333444466899999 55666654 3345799999999887664322110 0
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
....+..++|+|+|+.++....+ ..|+++++
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d-------------------------------------------------~~v~~~d~ 198 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQA-------------------------------------------------NAVHVFDL 198 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGG-------------------------------------------------TEEEEEET
T ss_pred cCCceeEEEEcCCCEEEEEECCC-------------------------------------------------CEEEEEEC
Confidence 01136678999999866655221 47888888
Q ss_pred -CCCc-eecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475 165 -DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (751)
Q Consensus 165 -~G~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (751)
+++. ..+..+ ..+..++|+|||++|++.... ...|++||+.+++........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~i~~~d~~~~~~~~~~~~~------------- 253 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI------------SEDISVIDRKTKLEIRKTDKI------------- 253 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT------------TTEEEEEETTTTEEEEECCCC-------------
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC------------CCcEEEEECCCCcEEEEecCC-------------
Confidence 5533 344433 667899999999999877532 346899999877554332211
Q ss_pred CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc
Q 004475 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT 320 (751)
Q Consensus 242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~ 320 (751)
..+..++|+|||+. ++......+... ...+.|+++++. ++............. +.|+|||+.|+++..
T Consensus 254 ~~~~~~~~~~~g~~-l~~~~~~~~~~~----~~dg~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--- 322 (433)
T 3bws_A 254 GLPRGLLLSKDGKE-LYIAQFSASNQE----SGGGRLGIYSMD---KEKLIDTIGPPGNKRHIVSGNTENKIYVSDM--- 322 (433)
T ss_dssp SEEEEEEECTTSSE-EEEEEEESCTTC----SCCEEEEEEETT---TTEEEEEEEEEECEEEEEECSSTTEEEEEET---
T ss_pred CCceEEEEcCCCCE-EEEEECCCCccc----cCCCeEEEEECC---CCcEEeeccCCCCcceEEECCCCCEEEEEec---
Confidence 12458899999998 555542211100 123589999985 333333333344556 899999998877652
Q ss_pred cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCc-ceEEEEccCCCCCCCCCceeEEE
Q 004475 321 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE-QIYILLNGRGFTPEGNIPFLDLF 399 (751)
Q Consensus 321 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 399 (751)
....|+++++.++ +........ ..... ++|+|||+.|++.....+.. ..++ ........|++|
T Consensus 323 ~~~~v~v~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~~~~~~~~~~~-------~~g~~dg~v~~~ 386 (433)
T 3bws_A 323 CCSKIEVYDLKEK--KVQKSIPVF-DKPNT------IALSPDGKYLYVSCRGPNHPTEGYL-------KKGLVLGKVYVI 386 (433)
T ss_dssp TTTEEEEEETTTT--EEEEEEECS-SSEEE------EEECTTSSEEEEEECCCCCTTTCTT-------SCCSSCCEEEEE
T ss_pred CCCEEEEEECCCC--cEEEEecCC-CCCCe------EEEcCCCCEEEEEecCCCccccccc-------cccccceEEEEE
Confidence 2357888888774 222222211 11111 78999999888877321100 0000 001123479999
Q ss_pred ecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 400 DINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 400 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
|+.+++......... .+ ..++|+|||+.|+..... -..+++++++
T Consensus 387 d~~~~~~~~~~~~~~-----~~-------~~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 387 DTTTDTVKEFWEAGN-----QP-------TGLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp ETTTTEEEEEEECSS-----SE-------EEEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred ECCCCcEEEEecCCC-----CC-------ceEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 999887765544321 12 235899999988776432 2457777654
No 124
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.74 E-value=3.4e-17 Score=159.54 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHh
Q 004475 582 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 661 (751)
Q Consensus 582 ~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 661 (751)
.+.+...++...+. .++++||++.|+|+||.+|+.++.++|+.++++++++|...... .+..
T Consensus 114 ~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~-----------------~~~~ 175 (246)
T 4f21_A 114 IAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD-----------------NFKG 175 (246)
T ss_dssp HHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH-----------------HHST
T ss_pred HHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc-----------------cccc
Confidence 33444444444443 58999999999999999999999999999999999999642100 0000
Q ss_pred cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 662 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 662 ~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.. .....++|+|++||+.|++|| +..++++++.|++.|.++++..||+.+|.+.. +.++.+.+||.+.|+
T Consensus 176 --~~-~~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~-----~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 176 --KI-TSINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVCM-----EEIKDISNFIAKTFK 245 (246)
T ss_dssp --TC-CGGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCCH-----HHHHHHHHHHHHHTT
T ss_pred --cc-cccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccCH-----HHHHHHHHHHHHHhC
Confidence 00 011236899999999999999 99999999999999999999999999998752 557789999999885
No 125
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.73 E-value=2.1e-17 Score=182.39 Aligned_cols=236 Identities=19% Similarity=0.157 Sum_probs=161.8
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHH-HHHHhCCeEEEE
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLA 559 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~v~~ 559 (751)
.+.+.++..+|..+.+.+|.|.+ .+++|+||++||.|.... ....+ ...+ ..|+++||+|+.
T Consensus 9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~-----------~~~~y-~~~~~~~la~~Gy~vv~ 71 (587)
T 3i2k_A 9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDV-----------FAWST-QSTNWLEFVRDGYAVVI 71 (587)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCH-----------HHHHT-TTCCTHHHHHTTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCcc-----------ccccc-hhhHHHHHHHCCCEEEE
Confidence 46788999999999999999975 336899999998642110 00000 0123 678999999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC-CCC
Q 004475 560 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YNK 638 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~-~d~ 638 (751)
.+.+|+|.+...........+|+.++++||.++++.+ .+|+++|+||||++++.+|+..|+.++++|+.++. .+.
T Consensus 72 ---~D~RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 ---QDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp ---EECTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred ---EcCCCCCCCCCccccccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 5556666664432223457899999999999887665 79999999999999999999998999999999988 664
Q ss_pred CCCc---cCcccc-cccchh------------------------------------------------------------
Q 004475 639 TLTP---FGFQTE-FRTLWE------------------------------------------------------------ 654 (751)
Q Consensus 639 ~~~~---~~~~~~-~~~~~~------------------------------------------------------------ 654 (751)
.... .+.... ....|.
T Consensus 148 ~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (587)
T 3i2k_A 148 RAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVD 227 (587)
T ss_dssp CCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTT
T ss_pred ccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhc
Confidence 3211 010000 000000
Q ss_pred ---hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc---------c
Q 004475 655 ---ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---------R 722 (751)
Q Consensus 655 ---~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---------~ 722 (751)
....|...++...+++|++|+|+++|..|..+ ..+.+++++|+..++ .++++-|.. |.... .
T Consensus 228 ~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~----~~~~~~~~~l~~~~~-~~L~iGPw~-H~~~~~~~g~~~~g~ 301 (587)
T 3i2k_A 228 HPDNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKDNAD-ARLVVGPWS-HSNLTGRNADRKFGI 301 (587)
T ss_dssp CCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTTTSC-EEEEEEEEE-TTBCSSEETTEECCG
T ss_pred CCCCChHHhcCChhhhhccCCCCEEEEccCCCccc----hHHHHHHHHHhhcCC-CEEEECCcc-ccCccccCCCcccCC
Confidence 01123344555567899999999999999874 457788999987654 367776654 65311 1
Q ss_pred cc---HHHHHHHHHHHHHHHhcCC
Q 004475 723 EN---VMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 723 ~~---~~~~~~~~~~fl~~~l~~~ 743 (751)
.. ..+..+.+++||+++|+..
T Consensus 302 ~~~~~~~~~~~~~~~wFD~~Lkg~ 325 (587)
T 3i2k_A 302 AATYPIQEATTMHKAFFDRHLRGE 325 (587)
T ss_dssp GGSCCHHHHHHHHHHHHHHHHSCC
T ss_pred ccccccchhhHHHHHHHHHHhcCC
Confidence 11 1233488999999999854
No 126
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.73 E-value=1.4e-15 Score=157.07 Aligned_cols=274 Identities=9% Similarity=-0.038 Sum_probs=166.6
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--eeccCCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPD 82 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--~~lt~~~~ 82 (751)
..|.++|+.+ |+.......+.. .. .++|||||++|+++. .....|+++++++++. +.+..+..
T Consensus 20 ~~v~~~d~~~----~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~ 84 (331)
T 3u4y_A 20 RRISFFSTDT----LEILNQITLGYD-FV-DTAITSDCSNVVVTS---------DFCQTLVQIETQLEPPKVVAIQEGQS 84 (331)
T ss_dssp TEEEEEETTT----CCEEEEEECCCC-EE-EEEECSSSCEEEEEE---------STTCEEEEEECSSSSCEEEEEEECSS
T ss_pred CeEEEEeCcc----cceeeeEEccCC-cc-eEEEcCCCCEEEEEe---------CCCCeEEEEECCCCceeEEecccCCC
Confidence 4799999988 888765543322 34 899999999887765 3346999999998874 33332221
Q ss_pred ccccceeee-eEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 83 ICLNAVFGS-FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 83 ~~~~~~~~~-~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
... ++|||||++|+ ....... ...|++
T Consensus 85 ------~~~~~~~s~dg~~l~-~~~~~~~---------------------------------------------~~~i~v 112 (331)
T 3u4y_A 85 ------SMADVDITPDDQFAV-TVTGLNH---------------------------------------------PFNMQS 112 (331)
T ss_dssp ------CCCCEEECTTSSEEE-ECCCSSS---------------------------------------------SCEEEE
T ss_pred ------CccceEECCCCCEEE-EecCCCC---------------------------------------------cccEEE
Confidence 244 89999999998 4221100 027889
Q ss_pred EcC-CCCce-ecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCcee-EEEEeCCCc-eeeeeccCCCCCCCCCcc
Q 004475 162 GSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK-VQVWTTDGK-LVRELCDLPPAEDIPVCY 237 (751)
Q Consensus 162 ~~~-~G~~~-~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~-l~~~d~~~~-~~~~l~~~~~~~~~~~~~ 237 (751)
+++ +++.. .+........++|+|||++|++..... .. +++|+++.. .........
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~--------- 171 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEF--------- 171 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEE---------
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCcc---------
Confidence 998 66443 333335567899999999988875442 23 667776532 111110000
Q ss_pred CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc---eEeEeeceeEE-EEEecCCceEE
Q 004475 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFS-VSWCDDSLALV 313 (751)
Q Consensus 238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~~~~~~-~~~spdg~~l~ 313 (751)
.......+.++|+|||++ ++++.. ..+.|++++++ .+.. ........... +.|||||++|+
T Consensus 172 ~~~~~~~~~~~~spdg~~-l~v~~~-----------~~~~v~v~d~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 172 ISGGTRPFNITFTPDGNF-AFVANL-----------IGNSIGILETQ---NPENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp ECSSSSEEEEEECTTSSE-EEEEET-----------TTTEEEEEECS---STTSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred ccCCCCccceEECCCCCE-EEEEeC-----------CCCeEEEEECC---CCcccceeeeccCCCCCceEEECCCCCEEE
Confidence 011123568999999998 555431 23578888875 3332 22222233445 89999999887
Q ss_pred EeeeecccceeEEEecCCCCCCcceeeeecccc----cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCC
Q 004475 314 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE----NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 389 (751)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~ 389 (751)
++.. ....|+++++.++ +.+.+...... .... .....++|||||++|++...
T Consensus 237 v~~~---~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~------------------ 292 (331)
T 3u4y_A 237 VLTE---STVDVFNFNQLSG--TLSFVKSFGHGLLIDPRPL-FGANQMALNKTETKLFISAN------------------ 292 (331)
T ss_dssp EECS---SEEEEEEEETTTT--EEEEEEEEECCCCCCCGGG-TTCCCEEECTTSSEEEEEET------------------
T ss_pred EEEc---CCCEEEEEECCCC--ceeeecccccccccCCCCc-ccccceEECCCCCEEEEecC------------------
Confidence 7652 2356888998874 22222111100 0000 01122689999999988772
Q ss_pred CCCCceeEEEecCCCcee
Q 004475 390 EGNIPFLDLFDINTGSKE 407 (751)
Q Consensus 390 ~~~~~~l~~~d~~~g~~~ 407 (751)
....|.+||+++....
T Consensus 293 --~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 293 --ISRELKVFTISGKVVG 308 (331)
T ss_dssp --TTTEEEEEETTSCEEE
T ss_pred --CCCcEEEEEecCCccc
Confidence 2347888999765443
No 127
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.73 E-value=2e-16 Score=158.28 Aligned_cols=212 Identities=15% Similarity=0.129 Sum_probs=135.3
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+- . .|.||++||.+. +...| ......|+++||.|++ ++.
T Consensus 3 ~~~~~g~~l~y~~~G-~---------g~~vvllHG~~~-----------~~~~w----~~~~~~l~~~g~~vi~---~D~ 54 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG-S---------GKPVLFSHGWLL-----------DADMW----EYQMEYLSSRGYRTIA---FDR 54 (271)
T ss_dssp EECTTSCEEEEEEES-S---------SSEEEEECCTTC-----------CGGGG----HHHHHHHHTTTCEEEE---ECC
T ss_pred EEcCCCCEEEEEccC-C---------CCeEEEECCCCC-----------cHHHH----HHHHHHHHhCCceEEE---ecC
Confidence 455678777766652 1 256899999641 11111 1345577789999999 666
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCC-
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLT- 641 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~d~~~~- 641 (751)
+|+|.+... ........+|+.++++.+ +.+++.++||||||.+++.+++. .|++++++|+.++.......
T Consensus 55 ~G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~ 128 (271)
T 3ia2_A 55 RGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQK 128 (271)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCB
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCC
Confidence 788777532 233566778888877776 23689999999999877666655 48999999998864321100
Q ss_pred ---ccCccccc-----cc--------------ch----------h--------------------hHHHHHhcCcccccC
Q 004475 642 ---PFGFQTEF-----RT--------------LW----------E--------------------ATNVYIEMSPITHAN 669 (751)
Q Consensus 642 ---~~~~~~~~-----~~--------------~~----------~--------------------~~~~~~~~~~~~~~~ 669 (751)
+....... .. .+ . ....+........+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (271)
T 3ia2_A 129 PDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMA 208 (271)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHT
T ss_pred CCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCccccc
Confidence 00000000 00 00 0 000001111223357
Q ss_pred CCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 670 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 670 ~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
++++|+|+++|++|.++| +..+.++...+. ...+++++++++|.+. .+..+++.+.+.+||.
T Consensus 209 ~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 209 KIDVPTLVIHGDGDQIVP--FETTGKVAAELI---KGAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCCcCC--hHHHHHHHHHhC---CCceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 899999999999999998 776555544432 3468999999999876 5667888999999985
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.73 E-value=5.2e-15 Score=152.74 Aligned_cols=295 Identities=9% Similarity=-0.007 Sum_probs=173.8
Q ss_pred ceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCC
Q 004475 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (751)
Q Consensus 35 ~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 114 (751)
.+.|++++++++.+. .....|.++++++++.......... .. .++|||||++|++....
T Consensus 2 ~~~~~~~~~~~~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~------- 60 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVE---------QHLRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDF------- 60 (331)
T ss_dssp -----CCCCEEEEEE---------GGGTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEEST-------
T ss_pred ceeEcCCCCEEEEEe---------cCCCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCC-------
Confidence 356788887766543 3457999999999987655443321 24 78999999988887431
Q ss_pred CCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC--ceecCCCceEEe-eeeCCCCceEE
Q 004475 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGTPAVYTA-VEPSPDQKYVL 190 (751)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~--~~~lt~~~~~~~-~~~SpDG~~i~ 190 (751)
...|+++|+ +++ .+.+..+..... ++|||||++|+
T Consensus 61 -----------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 61 -----------------------------------------CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV 99 (331)
T ss_dssp -----------------------------------------TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred -----------------------------------------CCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE
Confidence 147899999 665 344443344445 89999999998
Q ss_pred EEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCcc
Q 004475 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (751)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~ 270 (751)
...... ....|++||+++++........ .....++|+|||++ ++++...
T Consensus 100 -~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~-l~~~~~~------- 148 (331)
T 3u4y_A 100 -TVTGLN---------HPFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNG-LILIDRS------- 148 (331)
T ss_dssp -ECCCSS---------SSCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSC-EEEEEET-------
T ss_pred -EecCCC---------CcccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCE-EEEEecC-------
Confidence 332210 0127999999877654432211 12357899999998 6665421
Q ss_pred ccCcccc-eeeccCCCCCCCCce----EeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcc--eeeee
Q 004475 271 EVSPRDI-IYTQPAEPAEGEKPE----ILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP--RVLFD 342 (751)
Q Consensus 271 ~~~~~~~-l~~~~~~~~~~~~~~----~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~--~~l~~ 342 (751)
.+. +++++++. .+... .......... +.|+|||++|+++.. ....|+++++.++ ... .....
T Consensus 149 ----~~~~i~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~---~~~~v~v~d~~~~-~~~~~~~~~~ 218 (331)
T 3u4y_A 149 ----SANTVRRFKIDA--DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL---IGNSIGILETQNP-ENITLLNAVG 218 (331)
T ss_dssp ----TTTEEEEEEECT--TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET---TTTEEEEEECSST-TSCEEEEEEE
T ss_pred ----CCceEEEEEECC--CCcEeecCCccccCCCCccceEECCCCCEEEEEeC---CCCeEEEEECCCC-cccceeeecc
Confidence 134 66666641 12221 1112222345 899999998877652 2346888888775 221 11122
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhcee
Q 004475 343 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 422 (751)
Q Consensus 343 ~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 422 (751)
.. .. ...++|+|||++|++... ....|++||+++++.+.+......... ..
T Consensus 219 ~~-~~------~~~~~~spdg~~l~v~~~--------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~--~~ 269 (331)
T 3u4y_A 219 TN-NL------PGTIVVSRDGSTVYVLTE--------------------STVDVFNFNQLSGTLSFVKSFGHGLLI--DP 269 (331)
T ss_dssp CS-SC------CCCEEECTTSSEEEEECS--------------------SEEEEEEEETTTTEEEEEEEEECCCCC--CC
T ss_pred CC-CC------CceEEECCCCCEEEEEEc--------------------CCCEEEEEECCCCceeeeccccccccc--CC
Confidence 11 11 112889999998877652 123688899998877544322110000 00
Q ss_pred eeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 423 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 423 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
........++|||||++|+++... ...+.++|+.+....
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANI---SRELKVFTISGKVVG 308 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCEEE
T ss_pred CCcccccceEECCCCCEEEEecCC---CCcEEEEEecCCccc
Confidence 000111236899999998877532 356889998765433
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.72 E-value=4.7e-15 Score=157.00 Aligned_cols=269 Identities=9% Similarity=0.022 Sum_probs=177.6
Q ss_pred CCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 59 ~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.....|+++++++++..+...... .+..++|+|||++|++....
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~------------------------------- 52 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------------------------------- 52 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG-------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCC-------------------------------
Confidence 445789999999887665544333 35788999999998776321
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-CCCce-ecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeC
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (751)
...|+++|+ +|+.. .+..+..+..++|+|||++|++.... ...|++||+
T Consensus 53 -----------------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~------------~~~v~v~d~ 103 (391)
T 1l0q_A 53 -----------------SNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA------------SSTLSVIDT 103 (391)
T ss_dssp -----------------GTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEET
T ss_pred -----------------CCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC------------CCEEEEEEC
Confidence 147888998 67443 33333677899999999999887533 346999999
Q ss_pred CCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe
Q 004475 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (751)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 296 (751)
.+++........ ..+..++|+|||++ ++++.. ..+.|+++++. .+.......
T Consensus 104 ~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~~---~~~~~~~~~ 155 (391)
T 1l0q_A 104 TSNTVAGTVKTG-------------KSPLGLALSPDGKK-LYVTNN-----------GDKTVSVINTV---TKAVINTVS 155 (391)
T ss_dssp TTTEEEEEEECS-------------SSEEEEEECTTSSE-EEEEET-----------TTTEEEEEETT---TTEEEEEEE
T ss_pred CCCeEEEEEeCC-------------CCcceEEECCCCCE-EEEEeC-----------CCCEEEEEECC---CCcEEEEEe
Confidence 987655433221 23458899999998 655431 23589999985 333333333
Q ss_pred eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCC
Q 004475 297 LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 375 (751)
Q Consensus 297 ~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 375 (751)
...... +.|+|||+.|+++.. ....|+++++.++ .......... .... ++|+|||+.|++...+
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~~---~~~~v~~~d~~~~--~~~~~~~~~~-~~~~------~~~~~~g~~l~~~~~~--- 220 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVANF---DSMSISVIDTVTN--SVIDTVKVEA-APSG------IAVNPEGTKAYVTNVD--- 220 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEET---TTTEEEEEETTTT--EEEEEEECSS-EEEE------EEECTTSSEEEEEEEC---
T ss_pred cCCCcceEEECCCCCEEEEEeC---CCCEEEEEECCCC--eEEEEEecCC-Cccc------eEECCCCCEEEEEecC---
Confidence 333446 899999998876542 2357888898774 2233222211 1111 7899999998887731
Q ss_pred cceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEE
Q 004475 376 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 455 (751)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~ 455 (751)
.....|++||+.+++.......... + ..++|+|||+.|+++... -..+++
T Consensus 221 ---------------~~~~~v~~~d~~~~~~~~~~~~~~~-----~-------~~~~~s~dg~~l~~s~~~---d~~v~v 270 (391)
T 1l0q_A 221 ---------------KYFNTVSMIDTGTNKITARIPVGPD-----P-------AGIAVTPDGKKVYVALSF---XNTVSV 270 (391)
T ss_dssp ---------------SSCCEEEEEETTTTEEEEEEECCSS-----E-------EEEEECTTSSEEEEEETT---TTEEEE
T ss_pred ---------------cCCCcEEEEECCCCeEEEEEecCCC-----c-------cEEEEccCCCEEEEEcCC---CCEEEE
Confidence 1234799999988876544433211 1 235899999988777533 357999
Q ss_pred EEcCCCceeE
Q 004475 456 LSWPLKKSSQ 465 (751)
Q Consensus 456 ~~~~~g~~~~ 465 (751)
+|+.+++...
T Consensus 271 ~d~~~~~~~~ 280 (391)
T 1l0q_A 271 IDTATNTITA 280 (391)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEEE
Confidence 9998887554
No 130
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.72 E-value=4.4e-17 Score=160.53 Aligned_cols=201 Identities=13% Similarity=0.145 Sum_probs=131.2
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 589 (751)
.|.||++||.+ ++...| ......|+++||.|++ ++.+|+|.+... ........+|+.+++
T Consensus 16 ~~~vvllHG~~-----------~~~~~~----~~~~~~L~~~g~~vi~---~D~~GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFT-----------GNSADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTT-----------CCTHHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCC-----------CChHHH----HHHHHHHHHCCCEEEe---cccCCCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 36799999953 111111 1345567789999999 666788754221 112455667888888
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-c--Ccc---cc----cc-cc--h-hh
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F--GFQ---TE----FR-TL--W-EA 655 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~--~~~---~~----~~-~~--~-~~ 655 (751)
+++.+.+ .+++.|+||||||.+|+.+|.++| ++++|++++........ . ... .. .. .. . ..
T Consensus 78 ~~l~~~~---~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKG---YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHT---CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcC---CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 8887654 258999999999999999999998 88888765432211000 0 000 00 00 00 0 00
Q ss_pred -----------HHHHHh--cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc
Q 004475 656 -----------TNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 722 (751)
Q Consensus 656 -----------~~~~~~--~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 722 (751)
...+.. ......+.++++|+|+++|++|..+| +..++.+++.++. ..++++++|+++|.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 000000 01223467789999999999999998 8888888776643 247999999999998644
Q ss_pred ccHHHHHHHHHHHHHHH
Q 004475 723 ENVMHVIWETDRWLQKY 739 (751)
Q Consensus 723 ~~~~~~~~~~~~fl~~~ 739 (751)
...+.+.+.+.+||++.
T Consensus 229 ~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLESL 245 (247)
T ss_dssp TTHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 45678999999999753
No 131
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.72 E-value=4.2e-17 Score=161.82 Aligned_cols=187 Identities=14% Similarity=0.139 Sum_probs=130.0
Q ss_pred EEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc
Q 004475 496 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND 575 (751)
Q Consensus 496 ~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~ 575 (751)
+.+|+|...... .++.|+||++||++.. . .....+...|+++||.|++++++ +.+.
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~-----------~----~~~~~~~~~l~~~G~~v~~~d~~---~s~~----- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAG-----------P----STYAGLLSHWASHGFVVAAAETS---NAGT----- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCC-----------G----GGGHHHHHHHHHHTCEEEEECCS---CCTT-----
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCC-----------c----hhHHHHHHHHHhCCeEEEEecCC---CCcc-----
Confidence 788888752211 1258999999997521 1 11224566788899999996664 2211
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcc
Q 004475 576 RFVEQLVSSAEAAVEEVVRR---------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 646 (751)
Q Consensus 576 ~~~~~~~~d~~~~v~~l~~~---------~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 646 (751)
.+|+..+++++.+. ..++.++|+++||||||.+|+.++ .+.+++++++++|..... .
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~--~---- 155 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL--G---- 155 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST--T----
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc--c----
Confidence 12333455555432 245678999999999999999887 446899999988854310 0
Q ss_pred cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHH-HHHHHHHHHhCCCcEEEEEeCCCCCcCCccccH
Q 004475 647 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENV 725 (751)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 725 (751)
.....+.++++|+|++||++|.++| ... +.++++. .+.+++++++++++|.+.. +..
T Consensus 156 ----------------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 156 ----------------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp ----------------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred ----------------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0012356688999999999999998 775 6777665 3467899999999998763 334
Q ss_pred HHHHHHHHHHHHHHhcC
Q 004475 726 MHVIWETDRWLQKYCLS 742 (751)
Q Consensus 726 ~~~~~~~~~fl~~~l~~ 742 (751)
..+.+.+.+||+.++..
T Consensus 214 ~~~~~~i~~fl~~~l~~ 230 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMD 230 (258)
T ss_dssp GGGHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 57888999999988753
No 132
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.72 E-value=1.7e-16 Score=157.16 Aligned_cols=211 Identities=19% Similarity=0.137 Sum_probs=131.8
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
+|..+....+-+ + .|.||++||.+. .....| ......|+++||.|++ ++.+|+|
T Consensus 10 ~g~~l~~~~~g~-~--------~~~vvllHG~~~-------------~~~~~~-~~~~~~l~~~g~~vi~---~D~~G~G 63 (254)
T 2ocg_A 10 NGVQLHYQQTGE-G--------DHAVLLLPGMLG-------------SGETDF-GPQLKNLNKKLFTVVA---WDPRGYG 63 (254)
T ss_dssp TTEEEEEEEEEC-C--------SEEEEEECCTTC-------------CHHHHC-HHHHHHSCTTTEEEEE---ECCTTST
T ss_pred CCEEEEEEEecC-C--------CCeEEEECCCCC-------------CCccch-HHHHHHHhhCCCeEEE---ECCCCCC
Confidence 566666554421 1 367999999531 001111 1345566778999999 6667787
Q ss_pred CCCCCc-hh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC------
Q 004475 570 DKLPND-RF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT------ 641 (751)
Q Consensus 570 ~~~~~~-~~-~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~------ 641 (751)
.+.... .+ .....+++..+++++.+.+ ..++.++||||||.+|+.+|.++|++++++|+.++.......
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 140 (254)
T 2ocg_A 64 HSRPPDRDFPADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE 140 (254)
T ss_dssp TCCSSCCCCCTTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHH
Confidence 764321 11 1112344445555555543 368999999999999999999999999999998874321100
Q ss_pred ---cc-Cccccccc-------------chhh-HHHHHhc-------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 642 ---PF-GFQTEFRT-------------LWEA-TNVYIEM-------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 642 ---~~-~~~~~~~~-------------~~~~-~~~~~~~-------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
.. .+...... .|.. ...+... .....+.++++|+|+++|++|..+| ...++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~ 218 (254)
T 2ocg_A 141 GIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFHADFI 218 (254)
T ss_dssp TTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHHHHHH
Confidence 00 00000000 0000 0000110 1123467789999999999999998 8888777
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
.+.++ ..+++++|+++|... .+..+.+.+.+.+||
T Consensus 219 ~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 219 HKHVK----GSRLHLMPEGKHNLH-LRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHST----TCEEEEETTCCTTHH-HHTHHHHHHHHHHHH
T ss_pred HHhCC----CCEEEEcCCCCCchh-hhCHHHHHHHHHHHh
Confidence 76654 358999999999876 456778888888887
No 133
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.72 E-value=2e-15 Score=157.45 Aligned_cols=288 Identities=10% Similarity=0.069 Sum_probs=163.4
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++||-.+. +...--...|++++..++....-...........+..++|+||++.|+.. .+
T Consensus 44 ~V~~v~fSpDG~~las~s~----d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d---- 114 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASS----LSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS---- 114 (357)
T ss_dssp EEEEEEECSSSCEEEEEEC----SSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT----
T ss_pred CEEEEEECCCCCEEEEEcC----CCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC----
Confidence 5788999999999998653 11111246889998877654322111111112247789999999866533 21
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCcee-----cCCC-ceEEeeeeCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-----FGTP-AVYTAVEPSP 184 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~-----lt~~-~~~~~~~~Sp 184 (751)
..|.++|+ +++... ...+ ..+..++|+|
T Consensus 115 ---------------------------------------------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 115 ---------------------------------------------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp ---------------------------------------------SCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred ---------------------------------------------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 35666777 553211 1223 6788999999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
||++|+....+ ..|.+||..+++...... .....+..++|+|+++.+++...
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~------------~h~~~v~~v~~s~~~~~~~~s~~--- 201 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYN------------AHSSEVNCVAACPGKDTIFLSCG--- 201 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEEC------------CCSSCEEEEEECTTCSSCEEEEE---
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEc------------CCCCCEEEEEEccCCCceeeeec---
Confidence 99999876543 358899998776543211 11233568899999987344433
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
..+.|.++++.. +.....+. .....+. +.|+|++..++.+.. ....|.++++.++ ......
T Consensus 202 ---------~dg~v~~wd~~~--~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~---~d~~i~~wd~~~~--~~~~~~ 265 (357)
T 4g56_B 202 ---------EDGRILLWDTRK--PKPATRIDFCASDTIPTSVTWHPEKDDTFACGD---ETGNVSLVNIKNP--DSAQTS 265 (357)
T ss_dssp ---------TTSCEEECCTTS--SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE---SSSCEEEEESSCG--GGCEEE
T ss_pred ---------cCCceEEEECCC--CceeeeeeeccccccccchhhhhcccceEEEee---cccceeEEECCCC--cEeEEE
Confidence 235688888752 11222221 2334456 899999765443331 2245777777764 223322
Q ss_pred ecccccccCCCCCCCeeeCCCCCE-EEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhc
Q 004475 342 DRVFENVYSDPGSPMMTRTSTGTN-VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 420 (751)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~spDG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 420 (751)
......+.. ++|||||+. |+..+.+ ..|++||+++++..+...... .
T Consensus 266 ~~~~~~v~~------l~~sp~~~~~lasgs~D---------------------~~i~iwd~~~~~~~~~~~H~~-----~ 313 (357)
T 4g56_B 266 AVHSQNITG------LAYSYHSSPFLASISED---------------------CTVAVLDADFSEVFRDLSHRD-----F 313 (357)
T ss_dssp CCCSSCEEE------EEECSSSSCCEEEEETT---------------------SCEEEECTTSCEEEEECCCSS-----C
T ss_pred eccceeEEE------EEEcCCCCCEEEEEeCC---------------------CEEEEEECCCCcEeEECCCCC-----C
Confidence 222222333 789999864 5555522 268999999887655543221 1
Q ss_pred eeeeecCCcceeecc-CCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 421 AVALVFGQGEEDINL-NQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 421 ~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
+.. ++||| |++.|+ +.... +.|.++++.+
T Consensus 314 V~~-------vafsP~d~~~l~-s~s~D---g~v~iW~~~~ 343 (357)
T 4g56_B 314 VTG-------VAWSPLDHSKFT-TVGWD---HKVLHHHLPS 343 (357)
T ss_dssp EEE-------EEECSSSTTEEE-EEETT---SCEEEEECC-
T ss_pred EEE-------EEEeCCCCCEEE-EEcCC---CeEEEEECCC
Confidence 222 58998 666554 43332 3477788754
No 134
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.72 E-value=5.3e-16 Score=155.57 Aligned_cols=214 Identities=18% Similarity=0.126 Sum_probs=137.5
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+-|++ .|.||++||.+. + ...| ......|+++||.|++ ++.
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~-----------~---~~~w-~~~~~~l~~~g~~vi~---~D~ 56 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPL-----------S---ADDW-DNQMLFFLSHGYRVIA---HDR 56 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTC-----------C---GGGG-HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCC-----------c---hhhH-HHHHHHHHHCCceEEE---EcC
Confidence 345677778777665532 368999999641 1 1111 2345677889999999 667
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCCC-
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLT- 641 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~~- 641 (751)
+|+|.+... ........+|+.++++.+. .+++.++||||||.+|+.+++.+ |++++++|+.++.......
T Consensus 57 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 57 RGHGRSDQPSTGHDMDTYAADVAALTEALD------LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred CcCCCCCCCCCCCCHHHHHHHHHHHHHHcC------CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 788877532 2345667788888877762 35799999999999999988776 9999999998864211000
Q ss_pred ---ccCcccc-----------------------c--c-------c-------chhh-----H-------HHHHhcCcccc
Q 004475 642 ---PFGFQTE-----------------------F--R-------T-------LWEA-----T-------NVYIEMSPITH 667 (751)
Q Consensus 642 ---~~~~~~~-----------------------~--~-------~-------~~~~-----~-------~~~~~~~~~~~ 667 (751)
+...... . . . .|.. . ..+........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 0000000 0 0 0 0000 0 00011122233
Q ss_pred cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 668 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 668 ~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.++++|+|+++|++|..+| +....+.+..+ ...++++++++++|... .+..+.+.+.+.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAEL---LANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhh---CCCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999998 66433333222 23579999999999876 5667888999999985
No 135
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.72 E-value=3.9e-17 Score=177.34 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=159.6
Q ss_pred CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcc------cC--CCCccCCCCchHHHHH
Q 004475 479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV------RG--SPNEFSGMTPTSSLIF 550 (751)
Q Consensus 479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~ 550 (751)
+..+.+.++..+|.++.+.+|+|.+ .+++|+||+.||.|.........+ .+ ....+..+....+..|
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 4567899999999999999999986 346999999998763311000000 00 0001111111236789
Q ss_pred HhCCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 004475 551 LARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 629 (751)
Q Consensus 551 ~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 629 (751)
+++||+|+. .+.+|+|.+.... .+.....+|+.++++||.+++++| .||+++|+|+||++++.+|+..|+.++|+
T Consensus 114 a~~Gy~vv~---~D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 114 VPNDYVVVK---VALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GGGTCEEEE---EECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred HhCCCEEEE---EcCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 999999999 5555666654332 233567899999999999988777 79999999999999999999999999999
Q ss_pred EEccCCCCCCC---CccCccccc-ccch------------------h------h-HHHHHhcCcccccCCCCCCEEEEEc
Q 004475 630 IARSGSYNKTL---TPFGFQTEF-RTLW------------------E------A-TNVYIEMSPITHANKIKKPILIIHG 680 (751)
Q Consensus 630 v~~~~~~d~~~---~~~~~~~~~-~~~~------------------~------~-~~~~~~~~~~~~~~~~~~P~li~~G 680 (751)
|+.+|+.|... ..-+..... ...| . . .+.|...++ .+++|++|+|+++|
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~G 267 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCAS 267 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEEE
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeCC
Confidence 99999877321 000000000 0000 0 0 012333333 57889999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 681 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 681 ~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
-.|..+. ...+.+.++++... ...+++.++ +|..... .....+.+++||+++|+..
T Consensus 268 w~D~~~~--~~g~l~~y~~l~~~--~k~l~ih~~-~~~~~~~--~~~~~~~~~~wfD~~LkG~ 323 (560)
T 3iii_A 268 WSTQGLH--NRGSFEGFKQAASE--EKWLYVHGR-KEWESYY--ARENLERQKSFFDFYLKEE 323 (560)
T ss_dssp GGGTTTT--HHHHHHHHHHCCCS--SEEEEEESS-CHHHHHH--SHHHHHHHHHHHHHHTSCC
T ss_pred cCCCccc--chhHHHHHHhcccc--CcEEEECCC-CCcCccc--ChhHHHHHHHHHHHHhCCC
Confidence 9997443 56666777766543 334544332 2321100 1245678899999999853
No 136
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.72 E-value=8.3e-15 Score=163.91 Aligned_cols=292 Identities=12% Similarity=0.151 Sum_probs=186.1
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~ 85 (751)
.|.+|+..+ .....+.. ....+...+|+|||+.|+... ....|.+++..+...+.+.....
T Consensus 244 ~i~~w~~~~----~~~~~~~~--~~~~v~~v~~~~d~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~h~~--- 304 (577)
T 2ymu_A 244 TVKLWNRNG----QLLQTLTG--HSSSVNGVAFRPDGQTIASAS----------DDKTVKLWNRNGQLLQTLTGHSS--- 304 (577)
T ss_dssp CEEEECTTS----CEEEEECC--CSSCEEEEEECTTSSEEEEEE----------TTSCEEEEETTSCEEEEECCCSS---
T ss_pred EEEEEeCCC----CEEEEEec--CCCCEEEEEEcCCCCEEEEEe----------CCCEEEEEeCCCcEEEEEecCCC---
Confidence 577888655 44444442 233578899999999998863 23567777865544455532222
Q ss_pred cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC
Q 004475 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (751)
Q Consensus 86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 165 (751)
.+..++|+|||+.|+..+.+ ..|.+++++
T Consensus 305 --~v~~~~~~~~~~~l~t~~~d-------------------------------------------------~~i~~w~~~ 333 (577)
T 2ymu_A 305 --SVWGVAFSPDGQTIASASDD-------------------------------------------------KTVKLWNRN 333 (577)
T ss_dssp --CEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEETT
T ss_pred --CeEEEEECCCCCEEEEEeCC-------------------------------------------------CeEEEEeCC
Confidence 36788999999999877432 346666775
Q ss_pred C-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (751)
Q Consensus 166 G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (751)
+ ....+..+ ..+..++|+|||++|+....+ ..+.+|+..+.....+..+. ..
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~ 387 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SS 387 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTCCEEEEEECCS-------------SC
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CC
Confidence 5 55556555 678899999999999876443 35778998776555543322 33
Q ss_pred CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccc
Q 004475 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
++.++|+|||+. |+..+ ..+.|.+++.. +.....+......+. ++|+||++.|+.... .
T Consensus 388 v~~~~~s~dg~~-l~~~~------------~d~~v~~~~~~---~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d 447 (577)
T 2ymu_A 388 VRGVAFSPDGQT-IASAS------------DDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDDQTIASASD----D 447 (577)
T ss_dssp EEEEEECTTSSC-EEEEE------------TTSEEEEECTT---CCEEEEEECCSSCEEEEEECTTSSEEEEEET----T
T ss_pred eEEEEECCCCCE-EEEEe------------CCCEEEEEeCC---CCEEEEecCCCCCeEEEEECCCCCEEEEEcC----C
Confidence 568999999998 65543 23568888764 444555556666777 999999999887652 2
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 402 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 402 (751)
..|.+.+.++. ....+... ...+.. ++|||||+.|+..+.+ ..|++||..
T Consensus 448 ~~v~~w~~~~~--~~~~~~~~-~~~v~~------~~~spd~~~las~~~d---------------------~~i~iw~~~ 497 (577)
T 2ymu_A 448 KTVKLWNRNGQ--LLQTLTGH-SSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRN 497 (577)
T ss_dssp SEEEEEETTSC--EEEEEECC-SSCEEE------EEECTTSCEEEEEETT---------------------SEEEEEETT
T ss_pred CEEEEEECCCC--EEEEEcCC-CCCEEE------EEEcCCCCEEEEEeCC---------------------CEEEEEcCC
Confidence 34555666542 22223222 222222 7899999999887732 268888975
Q ss_pred CCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 403 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 403 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
++..+.+..... .+. .++|||||+.|+... . -+.|.++|.+
T Consensus 498 -~~~~~~~~~h~~----~v~-------~l~~s~dg~~l~s~~-~---dg~v~lwd~~ 538 (577)
T 2ymu_A 498 -GQLLQTLTGHSS----SVR-------GVAFSPDGQTIASAS-D---DKTVKLWNRN 538 (577)
T ss_dssp -SCEEEEEECCSS----CEE-------EEEECTTSSCEEEEE-T---TSEEEEECTT
T ss_pred -CCEEEEEeCCCC----CEE-------EEEEcCCCCEEEEEE-C---cCEEEEEeCC
Confidence 444333222111 122 258999999877543 2 2457777753
No 137
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.72 E-value=1.9e-16 Score=157.83 Aligned_cols=211 Identities=19% Similarity=0.191 Sum_probs=139.5
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+.+..+-+.+ .|+||++||.+. ....|. .....|+ ++|.|++ +|.
T Consensus 9 ~~~~~g~~l~y~~~G~~~--------~p~lvl~hG~~~--------------~~~~w~-~~~~~L~-~~~~vi~---~D~ 61 (266)
T 3om8_A 9 LATSDGASLAYRLDGAAE--------KPLLALSNSIGT--------------TLHMWD-AQLPALT-RHFRVLR---YDA 61 (266)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTC--------------CGGGGG-GGHHHHH-TTCEEEE---ECC
T ss_pred EeccCCcEEEEEecCCCC--------CCEEEEeCCCcc--------------CHHHHH-HHHHHhh-cCcEEEE---EcC
Confidence 445688888877775432 488999999641 111121 2333444 5899999 677
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP- 642 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~- 642 (751)
+|+|.+... ........+|+.++++.+ ..+++.++||||||.+|+.+|.++|++++++|+.++........
T Consensus 62 rG~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~ 135 (266)
T 3om8_A 62 RGHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ 135 (266)
T ss_dssp TTSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH
Confidence 788887533 224566677777777665 23589999999999999999999999999999987643211000
Q ss_pred c-----------Ccccc---cccchh----------hHHH-------------------HHhcCcccccCCCCCCEEEEE
Q 004475 643 F-----------GFQTE---FRTLWE----------ATNV-------------------YIEMSPITHANKIKKPILIIH 679 (751)
Q Consensus 643 ~-----------~~~~~---~~~~~~----------~~~~-------------------~~~~~~~~~~~~~~~P~li~~ 679 (751)
+ ..... ....|. ..+. +........+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~ 215 (266)
T 3om8_A 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIA 215 (266)
T ss_dssp HHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEE
T ss_pred HHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEE
Confidence 0 00000 000000 0000 011112234677899999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 680 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 680 G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
|++|.++| +..++.+.+.++. .++++++ +||... .+..+.+.+.+.+||.
T Consensus 216 G~~D~~~~--~~~~~~l~~~ip~----a~~~~i~-~gH~~~-~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 216 GAYDTVTA--ASHGELIAASIAG----ARLVTLP-AVHLSN-VEFPQAFEGAVLSFLG 265 (266)
T ss_dssp ETTCSSSC--HHHHHHHHHHSTT----CEEEEES-CCSCHH-HHCHHHHHHHHHHHHT
T ss_pred eCCCCCCC--HHHHHHHHHhCCC----CEEEEeC-CCCCcc-ccCHHHHHHHHHHHhc
Confidence 99999998 8888888777653 4788888 789765 6778888999999984
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.72 E-value=1.4e-14 Score=149.74 Aligned_cols=269 Identities=14% Similarity=0.112 Sum_probs=173.2
Q ss_pred CcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCCCccccceeeeeEEecCCcEEEEeecC
Q 004475 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (751)
Q Consensus 29 ~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 107 (751)
....+...+|||||+.|+... .+.|.++++.+++... +...........+..++|+|||+.|+....+
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 118 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred CCCceEEEEEecCCcEEEEcC-----------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 444688999999999999842 4788888887765322 2110000011147789999999999887432
Q ss_pred CCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC---ceecCCC-ceEEeeee
Q 004475 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEP 182 (751)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~---~~~lt~~-~~~~~~~~ 182 (751)
..|.++++ +++ ...+..+ ..+..++|
T Consensus 119 -------------------------------------------------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 119 -------------------------------------------------STLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp -------------------------------------------------SEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred -------------------------------------------------CcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 46778888 443 2233334 66889999
Q ss_pred CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (751)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~ 262 (751)
+|||++|+....+ ..+.+||+.+++...... .....+..+.|+|||+. ++...
T Consensus 150 ~~~~~~l~~~~~d-------------g~v~~~d~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~-l~~~~- 202 (337)
T 1gxr_A 150 SPDSKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQ------------GHTDGASCIDISNDGTK-LWTGG- 202 (337)
T ss_dssp CTTSSEEEEEETT-------------SCEEEEETTTTEEEEEEC------------CCSSCEEEEEECTTSSE-EEEEE-
T ss_pred CCCCCEEEEEeCC-------------CcEEEEeCCCCceeeeee------------cccCceEEEEECCCCCE-EEEEe-
Confidence 9999998876543 358899998765433211 11233568999999987 55543
Q ss_pred ccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
..+.|+++++. .............+. +.|+|||+.|+.... ...|.++++.++ ....+.
T Consensus 203 -----------~dg~i~~~d~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~--~~~~~~ 262 (337)
T 1gxr_A 203 -----------LDNTVRSWDLR---EGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----SSNVEVLHVNKP--DKYQLH 262 (337)
T ss_dssp -----------TTSEEEEEETT---TTEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSS--CEEEEC
T ss_pred -----------cCCcEEEEECC---CCceEeeecCCCceEEEEECCCCCEEEEEcC----CCcEEEEECCCC--CeEEEc
Confidence 23578899885 333333334455667 999999999887662 245777777774 223332
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhce
Q 004475 342 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 421 (751)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 421 (751)
.. ...+.. ++|+|||+.|+.... ...|.+|++.+++.......... +
T Consensus 263 ~~-~~~v~~------~~~~~~~~~l~~~~~---------------------dg~i~~~~~~~~~~~~~~~~~~~-----v 309 (337)
T 1gxr_A 263 LH-ESCVLS------LKFAYCGKWFVSTGK---------------------DNLLNAWRTPYGASIFQSKESSS-----V 309 (337)
T ss_dssp CC-SSCEEE------EEECTTSSEEEEEET---------------------TSEEEEEETTTCCEEEEEECSSC-----E
T ss_pred CC-ccceeE------EEECCCCCEEEEecC---------------------CCcEEEEECCCCeEEEEecCCCc-----E
Confidence 21 111222 789999999887772 23789999988876533322211 2
Q ss_pred eeeecCCcceeeccCCCEEEEEE
Q 004475 422 VALVFGQGEEDINLNQLKILTSK 444 (751)
Q Consensus 422 ~~~~~~~~~~~~s~dg~~l~~~~ 444 (751)
. .++|+||++.|+...
T Consensus 310 ~-------~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 310 L-------SCDISVDDKYIVTGS 325 (337)
T ss_dssp E-------EEEECTTSCEEEEEE
T ss_pred E-------EEEECCCCCEEEEec
Confidence 2 258999999777654
No 139
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.72 E-value=1.6e-16 Score=158.73 Aligned_cols=198 Identities=19% Similarity=0.190 Sum_probs=131.6
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 588 (751)
.|+||++||.+. +...| . ..... +.++|.|++ ++.+|+|.+... .....+..+|+.+.
T Consensus 15 ~~~vvllHG~~~-----------~~~~w---~-~~~~~-L~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGG-----------SGSYW---L-PQLAV-LEQEYQVVC---YDQRGTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTC-----------CGGGG---H-HHHHH-HHTTSEEEE---CCCTTBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCc-----------cHHHH---H-HHHHH-HhhcCeEEE---ECCCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 588999999641 11111 1 22333 456899999 677788877442 12355666666666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-cc---------------cc----
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-FQ---------------TE---- 648 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-~~---------------~~---- 648 (751)
++.+ ..+++.++||||||.+|+.+|.++|++++++|+.++.......... +. ..
T Consensus 76 l~~l------~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA------GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc------CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 6544 2358999999999999999999999999999998875321100000 00 00
Q ss_pred -cccchh--------------------------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHH
Q 004475 649 -FRTLWE--------------------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 701 (751)
Q Consensus 649 -~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~ 701 (751)
....|. ....+........+.++++|+|+++|++|..+| ...++.+.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 000000 000011122233467889999999999999998 888877776653
Q ss_pred hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 702 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 702 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
..++++++++||... .+..+.+.+.+.+||...+.
T Consensus 228 ----~~~~~~~~~~GH~~~-~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 228 ----DSQKMVMPYGGHACN-VTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp ----SEEEEEESSCCTTHH-HHCHHHHHHHHHHHHHHHHH
T ss_pred ----cCeEEEeCCCCcchh-hcCHHHHHHHHHHHHHHhcc
Confidence 468999999999875 67788999999999987653
No 140
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.72 E-value=3.2e-16 Score=157.25 Aligned_cols=214 Identities=16% Similarity=0.152 Sum_probs=137.8
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+-|++ .|.||++||.+. +...| ......|+++||.|++ ++.
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~-----------~~~~w----~~~~~~L~~~g~~vi~---~D~ 57 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPL-----------SADDW----DAQLLFFLAHGYRVVA---HDR 57 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCc-----------chhHH----HHHHHHHHhCCCEEEE---ecC
Confidence 345577778777765532 368999999641 11111 2345678889999999 667
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 640 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~-- 640 (751)
+|+|.+... ........+|+.++++.+ +.+++.++||||||.+|+.+++.+ |++++++|+.++......
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 58 RGHGRSSQVWDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 788887542 234566778888888776 235799999999999999988877 899999999886421100
Q ss_pred --CccCcccc-----------------------c--c-c-----ch-hhHHH-------------------HHhcCcccc
Q 004475 641 --TPFGFQTE-----------------------F--R-T-----LW-EATNV-------------------YIEMSPITH 667 (751)
Q Consensus 641 --~~~~~~~~-----------------------~--~-~-----~~-~~~~~-------------------~~~~~~~~~ 667 (751)
.+...... . . . .. ...+. +........
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 00000000 0 0 0 00 00000 001112233
Q ss_pred cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 668 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 668 ~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.++++|+|+++|++|..+| +....+.+..+ -...+++++++++|... .+....+.+.+.+||.
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKL---LPNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhh---CCCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56789999999999999998 66333333222 13578999999999875 4567888999999984
No 141
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.71 E-value=2.9e-16 Score=158.36 Aligned_cols=214 Identities=17% Similarity=0.109 Sum_probs=141.2
Q ss_pred EEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCC-ccCCCCchHHHHHHhCCeEEEEcC
Q 004475 483 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAVLAGP 561 (751)
Q Consensus 483 ~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~v~~~~ 561 (751)
+..+...+|..+....+-|++ .|+||++||.+. +.. .|. .....| ++||.|++
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~-----------~~~~~w~----~~~~~L-~~~~~vi~-- 57 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPG-----------GNAYVLR----EGLQDY-LEGFRVVY-- 57 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT--------SCEEEEECCTTT-----------CCSHHHH----HHHGGG-CTTSEEEE--
T ss_pred ceeEEeECCEEEEEEeecCCC--------CCEEEEECCCCC-----------cchhHHH----HHHHHh-cCCCEEEE--
Confidence 344445678888877775532 378999999641 111 111 122333 57999999
Q ss_pred CCCCCCCCCCCC-C----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 562 SIPIIGEGDKLP-N----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 562 ~~~~~g~g~~~~-~----~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
+|.+|+|.+.. . ........+|+.++++.+ ..+++.|+||||||.+|+.+|.++|+ ++++|+.++..
T Consensus 58 -~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~ 129 (286)
T 2yys_A 58 -FDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV 129 (286)
T ss_dssp -ECCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC
T ss_pred -ECCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc
Confidence 67778888764 3 223566777777777765 23589999999999999999999999 99999998864
Q ss_pred CCCC-C-cc--------------Cccc----cc-----cc--chhh-----H----------------HH--HH---hcC
Q 004475 637 NKTL-T-PF--------------GFQT----EF-----RT--LWEA-----T----------------NV--YI---EMS 663 (751)
Q Consensus 637 d~~~-~-~~--------------~~~~----~~-----~~--~~~~-----~----------------~~--~~---~~~ 663 (751)
.... . .. .+.. .. .. .... . .. +. ...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (286)
T 2yys_A 130 NFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLD 209 (286)
T ss_dssp BHHHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCB
T ss_pred CcHHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCC
Confidence 2100 0 00 0000 00 00 0000 0 00 00 011
Q ss_pred cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 664 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 664 ~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
....+.++++|+|+++|++|..+| .. ++.+.+ +.. +++++++++||... .+..+.+.+.+.+||.+.
T Consensus 210 ~~~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 210 YTPYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLR----APIRVLPEAGHYLW-IDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp CGGGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHT----CCEEEETTCCSSHH-HHCHHHHHHHHHHHHHTT
T ss_pred hhhhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCC----CCEEEeCCCCCCcC-hhhHHHHHHHHHHHHHhh
Confidence 223466789999999999999998 77 888887 754 36899999999876 556788999999999863
No 142
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.71 E-value=2.8e-17 Score=164.38 Aligned_cols=225 Identities=12% Similarity=0.060 Sum_probs=143.3
Q ss_pred CceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH-HhCC--
Q 004475 479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR-- 554 (751)
Q Consensus 479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G-- 554 (751)
...+.+++.+. .+..+..++|+|+++++.+ ++|+|+++||+++.. ....+ ......+ ++.|
T Consensus 16 ~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~------------~~~~~-~~~~~~~~~~~g~~ 80 (275)
T 2qm0_A 16 SNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ------------TFHEA-VKIQSVRAEKTGVS 80 (275)
T ss_dssp TTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH------------HHHHH-HHHHGGGHHHHCCC
T ss_pred CCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH------------HHHHH-HHHHhhcchhcCCC
Confidence 45778888875 5788999999999876543 599999999974200 00000 0011111 3457
Q ss_pred -eEEEEcCCCCCC---------CCCCCCC--------------CchhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEeC
Q 004475 555 -FAVLAGPSIPII---------GEGDKLP--------------NDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHS 609 (751)
Q Consensus 555 -~~v~~~~~~~~~---------g~g~~~~--------------~~~~~~~~~~d~-~~~v~~l~~~~~id~~~i~l~G~S 609 (751)
++|+.+++++.. .++.... .........+.+ .+++.++.++..+|+++++++|||
T Consensus 81 ~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S 160 (275)
T 2qm0_A 81 PAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHX 160 (275)
T ss_dssp CCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEET
T ss_pred CeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEec
Confidence 999986654311 0111000 000011112222 245666766666788899999999
Q ss_pred hHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCC
Q 004475 610 YGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF 689 (751)
Q Consensus 610 ~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~ 689 (751)
|||++|+.++.++|+.|+++++++|.+.+... ......+.+.... ......+|++++||+.|..++
T Consensus 161 ~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~-- 226 (275)
T 2qm0_A 161 LGGLFALHILFTNLNAFQNYFISSPSIWWNNK---------SVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM-- 226 (275)
T ss_dssp HHHHHHHHHHHHCGGGCSEEEEESCCTTHHHH---------GGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH--
T ss_pred chhHHHHHHHHhCchhhceeEEeCceeeeChH---------HHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh--
Confidence 99999999999999999999999997531100 0000001111100 023456899999999999887
Q ss_pred hHHHHHHHHHH---HhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 690 PMQAERFFDAL---KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 690 ~~~~~~~~~~l---~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
..++++++++| +..|.++++.++|+++|... ....+...+.||
T Consensus 227 ~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 227 VVGANELSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 89999999999 55778899999999999643 233445556665
No 143
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.71 E-value=7.8e-16 Score=165.53 Aligned_cols=220 Identities=13% Similarity=0.009 Sum_probs=145.4
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
...+.+...+|..+.....- ..|+||++||.+.. ...| ..+...|+++||.|++
T Consensus 3 ~i~~~~~~~dG~~l~y~~~G----------~gp~VV~lHG~~~~-----------~~~~----~~l~~~La~~Gy~Vi~- 56 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDHG----------TGVPVVLIHGFPLS-----------GHSW----ERQSAALLDAGYRVIT- 56 (456)
T ss_dssp EEEEEEETTEEEEEEEEEES----------SSEEEEEECCTTCC-----------GGGG----TTHHHHHHHHTEEEEE-
T ss_pred eEeecccccCCeEEEEEEeC----------CCCEEEEECCCCCc-----------HHHH----HHHHHHHHHCCcEEEE-
Confidence 34455556677666644331 24899999997521 1122 1356677889999999
Q ss_pred CCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCC
Q 004475 561 PSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYN 637 (751)
Q Consensus 561 ~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d 637 (751)
++.+|+|.+... .....+..+|+.++++++ +.++++++||||||.+++.+++.+ |++++++|++++...
T Consensus 57 --~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 57 --YDRRGFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp --ECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred --ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 566677776432 234567788888888877 346899999999999999988877 899999999998754
Q ss_pred CCCCccCccccc-c-------------c--c------------------hhhHHHH---------------------Hhc
Q 004475 638 KTLTPFGFQTEF-R-------------T--L------------------WEATNVY---------------------IEM 662 (751)
Q Consensus 638 ~~~~~~~~~~~~-~-------------~--~------------------~~~~~~~---------------------~~~ 662 (751)
............ . . . ......+ ...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (456)
T 3vdx_A 129 FLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYT 208 (456)
T ss_dssp CCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTC
T ss_pred ccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhh
Confidence 221110000000 0 0 0 0000000 001
Q ss_pred CcccccCCCCCCEEEEEcCCCCCCCCChH-HHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 663 SPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 663 ~~~~~~~~~~~P~li~~G~~D~~vp~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+....+.++++|+|+++|+.|..+| +. ....+.+.+ ..++++++++++|.+. .+....+.+.+.+||.+++.
T Consensus 209 d~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~----~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 209 DFRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL----PSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CCTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC----TTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC----CCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHhhc
Confidence 2223466789999999999999998 77 344444333 3568999999999976 46788999999999998764
No 144
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.71 E-value=6.4e-16 Score=157.01 Aligned_cols=211 Identities=15% Similarity=0.070 Sum_probs=137.9
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.+..+-|++ .|.||++||.+. ....|.......|+++||.|++ +|.+|+
T Consensus 8 ~~g~~l~y~~~G~~~--------~~~vvllHG~~~--------------~~~~w~~~~~~~L~~~G~~vi~---~D~rG~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA--------DPALLLVMGGNL--------------SALGWPDEFARRLADGGLHVIR---YDHRDT 62 (298)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTC--------------CGGGSCHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEeccCCC--------CCeEEEEcCCCC--------------CccchHHHHHHHHHhCCCEEEe---eCCCCC
Confidence 467777777665432 368999999641 1122222234677888999999 666788
Q ss_pred CCCCC--C---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC-CC----
Q 004475 569 GDKLP--N---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY-NK---- 638 (751)
Q Consensus 569 g~~~~--~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~-d~---- 638 (751)
|.+.. . .....+..+|+.++++.+ +.+++.++||||||.+|+.+|.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 87754 1 123566777777777765 23589999999999999999999999999999988654 21
Q ss_pred -------------CCCccC------ccc-----cc------------------ccchhhH---H----HHHhc-------
Q 004475 639 -------------TLTPFG------FQT-----EF------------------RTLWEAT---N----VYIEM------- 662 (751)
Q Consensus 639 -------------~~~~~~------~~~-----~~------------------~~~~~~~---~----~~~~~------- 662 (751)
...... ... .. ...+... + .+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 000 00 0000000 0 00000
Q ss_pred ----------Ccccc-cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHH
Q 004475 663 ----------SPITH-ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 731 (751)
Q Consensus 663 ----------~~~~~-~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 731 (751)
..... +.++++|+|+++|++|..+| +..++.+.+.+ ...+++++|++||. ...++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gHe-----~p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLI----PTARLAEIPGMGHA-----LPSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTS----TTEEEEEETTCCSS-----CCGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhC----CCCEEEEcCCCCCC-----CcHHHHHH
Confidence 01123 66789999999999999998 77777666554 35689999999993 23467888
Q ss_pred HHHHHHHHhc
Q 004475 732 TDRWLQKYCL 741 (751)
Q Consensus 732 ~~~fl~~~l~ 741 (751)
+.+||.++..
T Consensus 286 i~~fl~~~~~ 295 (298)
T 1q0r_A 286 LAEVILAHTR 295 (298)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988753
No 145
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.70 E-value=2e-17 Score=158.54 Aligned_cols=191 Identities=14% Similarity=0.123 Sum_probs=131.8
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.+..+.|++ ..+.|+||++||.+.. ...+... .....|+++||.|+++ +.+|+
T Consensus 14 ~~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~-----------~~~~~~~--~~~~~l~~~G~~v~~~---d~~g~ 72 (210)
T 1imj_A 14 VQGQALFFREALPGS-----GQARFSVLLLHGIRFS-----------SETWQNL--GTLHRLAQAGYRAVAI---DLPGL 72 (210)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCC-----------HHHHHHH--THHHHHHHTTCEEEEE---CCTTS
T ss_pred eCCeEEEEEEeCCCC-----CCCCceEEEECCCCCc-----------cceeecc--hhHHHHHHCCCeEEEe---cCCCC
Confidence 377889999998864 2246899999996411 1111100 1356788899999994 44555
Q ss_pred CCCCCCc--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC
Q 004475 569 GDKLPND--RFVEQLV--SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 644 (751)
Q Consensus 569 g~~~~~~--~~~~~~~--~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~ 644 (751)
|.+.... ....... +++..+++.+ +.++++++|||+||.+|+.++..+|++++++|+.+|......
T Consensus 73 g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---- 142 (210)
T 1imj_A 73 GHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---- 142 (210)
T ss_dssp GGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----
T ss_pred CCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc----
Confidence 5543221 1112222 5555555554 246899999999999999999999999999999998643110
Q ss_pred cccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc
Q 004475 645 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 724 (751)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 724 (751)
....+.++++|+|+++|++|. +| ...++.+ +.+ ..+++.++++++|.+. .+.
T Consensus 143 -------------------~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~~----~~~~~~~~~~~~H~~~-~~~ 194 (210)
T 1imj_A 143 -------------------NAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQL----PNHRVLIMKGAGHPCY-LDK 194 (210)
T ss_dssp -------------------CHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TTS----SSEEEEEETTCCTTHH-HHC
T ss_pred -------------------cchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hhC----CCCCEEEecCCCcchh-hcC
Confidence 112235678999999999999 87 6665555 333 4679999999999864 444
Q ss_pred HHHHHHHHHHHHHH
Q 004475 725 VMHVIWETDRWLQK 738 (751)
Q Consensus 725 ~~~~~~~~~~fl~~ 738 (751)
...+.+.+.+||++
T Consensus 195 ~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 195 PEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 66778888888874
No 146
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.70 E-value=2.5e-16 Score=159.60 Aligned_cols=213 Identities=19% Similarity=0.162 Sum_probs=136.0
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+....+-+.. +.|.||++||++.. ...+ . .....++++||.|++ ++.+|+
T Consensus 12 ~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~-----------~~~~---~-~~~~~l~~~g~~vi~---~D~~G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAPE-------EKAKLMTMHGGPGM-----------SHDY---L-LSLRDMTKEGITVLF---YDQFGC 66 (293)
T ss_dssp ETTEEEEEEEECCSS-------CSEEEEEECCTTTC-----------CSGG---G-GGGGGGGGGTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEECCCC-------CCCeEEEEeCCCCc-----------chhH---H-HHHHHHHhcCcEEEE---ecCCCC
Confidence 356667666554311 13789999995311 0111 1 112334678999999 667788
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-----
Q 004475 569 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----- 640 (751)
Q Consensus 569 g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~----- 640 (751)
|.+.... .......+|+.++++.+. +.+++.|+||||||.+|+.+|.++|++++++|+.++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 8875443 234566777777777762 125899999999999999999999999999999988643100
Q ss_pred ------CccC----c---------ccc-c--------------ccchhhH--HH---------HHh--------------
Q 004475 641 ------TPFG----F---------QTE-F--------------RTLWEAT--NV---------YIE-------------- 661 (751)
Q Consensus 641 ------~~~~----~---------~~~-~--------------~~~~~~~--~~---------~~~-------------- 661 (751)
.... . ... . ...|... .. +..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 0000 0 000 0 0001000 00 000
Q ss_pred -cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 662 -MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 662 -~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
......+.++++|+|+++|++| .++ +..++.+.+.+. .++++++++++|... .+....+.+.+.+||.++
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCC----CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHhc
Confidence 0112234568899999999999 666 777777766553 468999999999875 456788999999999764
No 147
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.70 E-value=1.1e-15 Score=153.16 Aligned_cols=212 Identities=16% Similarity=0.160 Sum_probs=134.1
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+- ..|+||++||.+. +...| ......|+++||.|++ ++.
T Consensus 3 ~~~~~g~~l~y~~~g----------~~~~vvllHG~~~-----------~~~~~----~~~~~~L~~~g~~vi~---~D~ 54 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG----------SGQPIVFSHGWPL-----------NADSW----ESQMIFLAAQGYRVIA---HDR 54 (273)
T ss_dssp EECTTSCEEEEEEES----------CSSEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EecCCCcEEEEEEcC----------CCCEEEEECCCCC-----------cHHHH----hhHHhhHhhCCcEEEE---ECC
Confidence 345577777655442 1367999999641 11111 2345678889999999 666
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 640 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~-- 640 (751)
+|+|.+... ........+|+.++++.+ +.+++.++||||||.+|+.+++++ |++++++|+.++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 55 RGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 788877542 223556677777777665 346899999999999999977765 899999999886421100
Q ss_pred --CccCcccc-----------------------c--c-------c-------chhh-----H-------HHHHhcCcccc
Q 004475 641 --TPFGFQTE-----------------------F--R-------T-------LWEA-----T-------NVYIEMSPITH 667 (751)
Q Consensus 641 --~~~~~~~~-----------------------~--~-------~-------~~~~-----~-------~~~~~~~~~~~ 667 (751)
........ . . . .|.. . ..+........
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 00000000 0 0 0 0000 0 00111122234
Q ss_pred cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 668 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 668 ~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.++++|+|+++|++|..+| +....+.+..+. ..++++++++++|... .+..+.+.+.+.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHhC---CCcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 56789999999999999998 664433333321 2468999999999875 5667888999999985
No 148
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.70 E-value=6.7e-16 Score=155.01 Aligned_cols=194 Identities=16% Similarity=0.090 Sum_probs=130.0
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVE 590 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~v~ 590 (751)
|.||++||.+. +...| ......|+++||.|++ ++.+|+|.+.... .......+|+.++++
T Consensus 24 ~pvvllHG~~~-----------~~~~~----~~~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~ 85 (277)
T 1brt_A 24 QPVVLIHGFPL-----------SGHSW----ERQSAALLDAGYRVIT---YDRRGFGQSSQPTTGYDYDTFAADLNTVLE 85 (277)
T ss_dssp SEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCC-----------cHHHH----HHHHHHHhhCCCEEEE---eCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 35999999641 11111 2345677889999999 6677888775432 245667788888887
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCC----ccC-cccc-----------cc-c-
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT----PFG-FQTE-----------FR-T- 651 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~d~~~~----~~~-~~~~-----------~~-~- 651 (751)
.+ +.+++.++||||||.+|+.+|.++|+ +++++|+.++....... +.. .... .. .
T Consensus 86 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T 1brt_A 86 TL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp HH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHH
T ss_pred Hh------CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhh
Confidence 76 23589999999999999999999998 99999999874321110 000 0000 00 0
Q ss_pred -------chh---------hH---HHHH------------------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHH-
Q 004475 652 -------LWE---------AT---NVYI------------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA- 693 (751)
Q Consensus 652 -------~~~---------~~---~~~~------------------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~- 693 (751)
.+. .. +.+. .......+.++++|+|+++|++|..+| ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~ 237 (277)
T 1brt_A 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP--IENTA 237 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC--GGGTH
T ss_pred HHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCC--hHHHH
Confidence 000 00 0000 111222456789999999999999998 7776
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.+.+.+. ..+++++++++|... .+..+.+.+.+.+||.
T Consensus 238 ~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 238 RVFHKALP----SAEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp HHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHCC----CCcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 66666553 458999999999875 4567788899999985
No 149
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.70 E-value=5.3e-16 Score=156.14 Aligned_cols=194 Identities=14% Similarity=0.124 Sum_probs=125.3
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVE 590 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~ 590 (751)
|.||++||.+. +...|. .....|+++||.|++ ++.+|+|.+... ........+|+.++++
T Consensus 28 ~~vvllHG~~~-----------~~~~w~----~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~ 89 (281)
T 3fob_A 28 KPVVLIHGWPL-----------SGRSWE----YQVPALVEAGYRVIT---YDRRGFGKSSQPWEGYEYDTFTSDLHQLLE 89 (281)
T ss_dssp EEEEEECCTTC-----------CGGGGT----TTHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCC-----------cHHHHH----HHHHHHHhCCCEEEE---eCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 67899999641 112222 235577889999999 667788877543 2335666777777776
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCC----ccCccc-cc---------------
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLT----PFGFQT-EF--------------- 649 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~d~~~~----~~~~~~-~~--------------- 649 (751)
.+ +.+++.|+||||||.+++.+++. .|++++++|+.++....... +..... ..
T Consensus 90 ~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (281)
T 3fob_A 90 QL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAF 163 (281)
T ss_dssp HT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHH
T ss_pred Hc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHH
Confidence 65 23589999999999987776655 58999999988764221100 000000 00
Q ss_pred --------------c-cc--------hh------------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHH-
Q 004475 650 --------------R-TL--------WE------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA- 693 (751)
Q Consensus 650 --------------~-~~--------~~------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~- 693 (751)
. .. |. ....+...+....+.++++|+|+++|++|..+| +..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~ 241 (281)
T 3fob_A 164 LDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVP--FEYSG 241 (281)
T ss_dssp HHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSC--GGGTH
T ss_pred HHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcC--HHHHH
Confidence 0 00 00 000011122234567899999999999999998 7765
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.+.+.+ ...++++++++||... .+..+.+.+.+.+||.
T Consensus 242 ~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 242 KLTHEAI----PNSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp HHHHHHS----TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred HHHHHhC----CCceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 3333333 3468999999999875 6677889999999984
No 150
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.70 E-value=3e-16 Score=160.04 Aligned_cols=214 Identities=10% Similarity=0.080 Sum_probs=141.6
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
+|..+....+-+ .|+||++||.+. +...|. .+...|+.+||.|++ ++.+|+|
T Consensus 17 ~g~~l~~~~~g~----------~~~vv~~HG~~~-----------~~~~~~----~~~~~l~~~g~~v~~---~d~~G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEGS----------GQPVLFLHGNPT-----------SSYLWR----NIIPYVVAAGYRAVA---PDLIGMG 68 (309)
T ss_dssp TTEEEEEEEEEC----------SSEEEEECCTTC-----------CGGGGT----TTHHHHHHTTCEEEE---ECCTTST
T ss_pred CCeEEEEEEcCC----------CCEEEEECCCcc-----------hhhhHH----HHHHHHHhCCCEEEE---EccCCCC
Confidence 566676555421 478999999642 112221 345566889999999 5666777
Q ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccc
Q 004475 570 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT 647 (751)
Q Consensus 570 ~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~ 647 (751)
.+... .....+..+|+.++++.+ +.++++|+||||||.+|+.++.++|++++++|++++..........+..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc
Confidence 76443 234566677777777665 2368999999999999999999999999999999976542210000000
Q ss_pred c------------------------------------c--ccchhhHHHH-----------------Hhc----------
Q 004475 648 E------------------------------------F--RTLWEATNVY-----------------IEM---------- 662 (751)
Q Consensus 648 ~------------------------------------~--~~~~~~~~~~-----------------~~~---------- 662 (751)
. . ...-.....+ ...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred cchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 0 0 0000000000 000
Q ss_pred ----CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 663 ----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 663 ----~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
.....+.++++|+|+++|++|..+| ...++.+.+.+. ..++.++++++|... .+....+.+.+.+||++
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 295 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVP----NLEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRR 295 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCC----CCEEEEecCCcccch-hhCHHHHHHHHHHHHHh
Confidence 0011245678999999999999998 888777777653 356777799999765 56778899999999999
Q ss_pred HhcCCC
Q 004475 739 YCLSNT 744 (751)
Q Consensus 739 ~l~~~~ 744 (751)
...+..
T Consensus 296 ~~~~~~ 301 (309)
T 3u1t_A 296 NKPHAS 301 (309)
T ss_dssp HCCCCC
T ss_pred cchhhh
Confidence 976543
No 151
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.5e-15 Score=174.75 Aligned_cols=295 Identities=12% Similarity=0.044 Sum_probs=178.3
Q ss_pred ceeEEeecC---CCCCCCCcccccC---CCCcc--cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee
Q 004475 5 TGIGIHRLL---PDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP 76 (751)
Q Consensus 5 ~~~~~~~~~---~~~~~g~~~~l~~---~~~~~--~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~ 76 (751)
..||+++.. + ++.+.|.. +..+. .+..++|||||++|||.+... +....+||++++++|+..+
T Consensus 133 ~~l~~~~~~~~~~----~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-----G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 133 SQLLVRPADAPVG----TKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG-----GSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp CEEEEEETTSCTT----CCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET-----TCSEEEEEEEETTTCCEEE
T ss_pred EEEEEEcCCccCC----CCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC-----CCceEEEEEEECCCCCCCC
Confidence 567888886 5 77776532 12222 467899999999999987531 1334789999999998766
Q ss_pred ccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhee
Q 004475 77 LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (751)
Q Consensus 77 lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (751)
.+.... .+..++|||| +.|+|.+.+....... . . .....
T Consensus 204 ~~~~~~-----~~~~~~wspD-~~l~~~~~~~~~~~~~---------~---~-----------------------~~~~~ 242 (741)
T 1yr2_A 204 DELKWV-----KFSGLAWLGN-DALLYSRFAEPKEGQA---------F---Q-----------------------ALNYN 242 (741)
T ss_dssp EEEEEE-----ESCCCEESTT-SEEEEEECCCC-------------------------------------------CCCC
T ss_pred ccCCCc-----eeccEEEECC-CEEEEEEecCcccccc---------c---c-----------------------cCCCC
Confidence 521110 1257899999 9999996542210000 0 0 00012
Q ss_pred eEEEEEcC-CCC--ceecCCC----ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc--e-eeeecc
Q 004475 157 AQLVLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--L-VRELCD 226 (751)
Q Consensus 157 ~~l~~~~~-~G~--~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~-~~~l~~ 226 (751)
.+||++++ +++ .+.+... ..+..+.|||||++|++.+.... ....+||++|++++ + .+.|..
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT--------DPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT--------CSCCEEEEEEEETTEECCCEEEEC
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC--------CCcceEEEEECCCCCCcccEEecC
Confidence 57999998 553 2333322 24678999999999999875431 12568999999876 4 555543
Q ss_pred CCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE-EE
Q 004475 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS-VS 304 (751)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~-~~ 304 (751)
.... . ...++|||++ |++.+.. ...+..|++++++... +..+.+... ...+. +.
T Consensus 315 ~~~~-------------~-~~~~~~dg~~-l~~~s~~--------~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 315 DLKA-------------Q-WDFVDGVGDQ-LWFVSGD--------GAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVG 370 (741)
T ss_dssp SSSS-------------C-EEEEEEETTE-EEEEECT--------TCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEE
T ss_pred CCCc-------------e-EEEEeccCCE-EEEEECC--------CCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEE
Confidence 3211 1 1235699999 6665422 1124589999986211 233444433 33445 66
Q ss_pred EecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEcc
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 384 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~ 384 (751)
|+ +..|++.... ....+||+++++++ ..+.+.......+.. ++++|||+.|+|.....
T Consensus 371 ~~--~~~lv~~~~~-dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~----------- 428 (741)
T 1yr2_A 371 IA--GNRLFASYIH-DAKSQVLAFDLDGK--PAGAVSLPGIGSASG------LSGRPGDRHAYLSFSSF----------- 428 (741)
T ss_dssp EE--BTEEEEEEEE-TTEEEEEEEETTSC--EEEECBCSSSCEEEE------EECCBTCSCEEEEEEET-----------
T ss_pred EE--CCEEEEEEEE-CCEEEEEEEeCCCC--ceeeccCCCCeEEEE------eecCCCCCEEEEEEcCC-----------
Confidence 66 5566666543 34568999998653 334443211111112 67899999888776321
Q ss_pred CCCCCCCCCceeEEEecCCCceeEE
Q 004475 385 RGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 385 ~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
.....|++||+.+++.+.+
T Consensus 429 ------~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 429 ------TQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ------TEEEEEEEEETTTTEEEEC
T ss_pred ------CCCCEEEEEECCCCcEEEE
Confidence 2344799999998876544
No 152
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.70 E-value=2.4e-16 Score=165.92 Aligned_cols=186 Identities=16% Similarity=0.130 Sum_probs=128.1
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC----------------
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------------- 573 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~---------------- 573 (751)
+++|+||++||++.. .......+..|+++||+|++++.+ |+|.+..
T Consensus 96 ~~~P~Vv~~HG~~~~---------------~~~~~~~a~~La~~Gy~V~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~ 157 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF---------------RTLYSAIGIDLASHGFIVAAVEHR---DRSASATYYFKDQSAAEIGDKSW 157 (383)
T ss_dssp SCEEEEEEECCTTCC---------------TTTTHHHHHHHHHTTCEEEEECCC---SSCSSEEEECSSHHHHHHTCCEE
T ss_pred CCCCEEEEcCCCCCC---------------chHHHHHHHHHHhCceEEEEeccC---CCCccceeecCCccccccCCcee
Confidence 368999999997411 111235677899999999996554 4433210
Q ss_pred -------Cc-h------hHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeChHHHHHHHHH
Q 004475 574 -------ND-R------FVEQLVSSAEAAVEEVVR--------------------RGVADPSRIAVGGHSYGAFMTAHLL 619 (751)
Q Consensus 574 -------~~-~------~~~~~~~d~~~~v~~l~~--------------------~~~id~~~i~l~G~S~GG~~a~~~a 619 (751)
.. . ......+|+..+++++.+ ...+|.+||+++|||+||.+|+.++
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 237 (383)
T 3d59_A 158 LYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL 237 (383)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHH
Confidence 00 0 012235788999999976 4457788999999999999999998
Q ss_pred HhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHH
Q 004475 620 AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 699 (751)
Q Consensus 620 ~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~ 699 (751)
.+.+ +++++|+++|.... . . ...+.++++|+|++||++|..+ ... +..+.
T Consensus 238 ~~~~-~v~a~v~~~~~~~p----~----~----------------~~~~~~i~~P~Lii~g~~D~~~----~~~-~~~~~ 287 (383)
T 3d59_A 238 SEDQ-RFRCGIALDAWMFP----L----G----------------DEVYSRIPQPLFFINSEYFQYP----ANI-IKMKK 287 (383)
T ss_dssp HHCT-TCCEEEEESCCCTT----C----C----------------GGGGGSCCSCEEEEEETTTCCH----HHH-HHHHT
T ss_pred hhCC-CccEEEEeCCccCC----C----c----------------hhhhccCCCCEEEEecccccch----hhH-HHHHH
Confidence 8874 69999999885321 0 0 0113567899999999999853 332 23355
Q ss_pred HHhCCCcEEEEEeCCCCCcCCcc------------------ccH----HHHHHHHHHHHHHHhcCC
Q 004475 700 LKGHGALSRLVLLPFEHHVYAAR------------------ENV----MHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 700 l~~~~~~~~~~~~~~~~H~~~~~------------------~~~----~~~~~~~~~fl~~~l~~~ 743 (751)
+...+.+++++++++++|.+... ... +.+.+.+++||+++++..
T Consensus 288 l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 288 CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 66667789999999999986310 011 233457999999999754
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=3.7e-15 Score=156.01 Aligned_cols=284 Identities=13% Similarity=0.094 Sum_probs=159.4
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~ 85 (751)
+|+++.++. ++|+.+.+... ........+|||||++|+++...+ ...+...+|.++.++|+.+++........
T Consensus 28 ~i~~~~~d~--~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~----~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 28 GIYTFRFNE--ETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS----KDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp EEEEEEEET--TTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS----STTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CEEEEEEeC--CCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccC----CCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 688887754 55888877644 333456779999999998876311 11345666777777687777654322110
Q ss_pred cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-
Q 004475 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (751)
Q Consensus 86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 164 (751)
....+++ ||++|++..... ..+.++++
T Consensus 101 --~p~~~~~--dg~~l~~~~~~~------------------------------------------------~~v~~~~~~ 128 (361)
T 3scy_A 101 --DPCYLTT--NGKNIVTANYSG------------------------------------------------GSITVFPIG 128 (361)
T ss_dssp --CEEEEEE--CSSEEEEEETTT------------------------------------------------TEEEEEEBC
T ss_pred --CcEEEEE--CCCEEEEEECCC------------------------------------------------CEEEEEEeC
Confidence 1233444 999888774311 23444444
Q ss_pred -CCCceecCC---------------CceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce-------e
Q 004475 165 -DGTAKDFGT---------------PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-------V 221 (751)
Q Consensus 165 -~G~~~~lt~---------------~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-------~ 221 (751)
+|....+.. ......++|||||++|++.... ...+++|+++... .
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------------~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG------------TDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTCCTTTCCCC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC------------CCEEEEEEEcCCCCcccccce
Confidence 333222210 0234679999999999887543 2356677665322 1
Q ss_pred eee---ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe--
Q 004475 222 REL---CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-- 296 (751)
Q Consensus 222 ~~l---~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-- 296 (751)
... .... .....+++.++|||||++ ++++.. ..+.|.+++++ ++....+..
T Consensus 197 ~~~~~~~~~~---------~~~~~~~~~~~~spdg~~-l~v~~~-----------~~~~v~v~~~~---~g~~~~~~~~~ 252 (361)
T 3scy_A 197 LTKGTPEAFK---------VAPGSGPRHLIFNSDGKF-AYLINE-----------IGGTVIAFRYA---DGMLDEIQTVA 252 (361)
T ss_dssp EEEEEEEEEE---------CCTTCCEEEEEECTTSSE-EEEEET-----------TTCEEEEEEEE---TTEEEEEEEEE
T ss_pred eeccccccee---------cCCCCCCeEEEEcCCCCE-EEEEcC-----------CCCeEEEEEec---CCceEEeEEEe
Confidence 110 0000 011234568999999998 665431 22467777774 333322221
Q ss_pred -ec---eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 297 -LD---LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 297 -~~---~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
.. .... ++|||||++|+.+.......-.+|.++..++ ..+.+....... ....++|||||++|++...
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g~-----~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTGI-----HPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECSS-----CCCEEEECTTSCEEEEEET
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCCC-----CCceEEECCCCCEEEEEEC
Confidence 11 1234 8999999988765532123346666665553 323332221110 1111789999999988772
Q ss_pred ecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 372 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
. .....+|.+|.++|+.+.+
T Consensus 326 ~------------------~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 326 D------------------TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp T------------------TTEEEEEEECTTTCCEEEC
T ss_pred C------------------CCCEEEEEEECCCCcEeec
Confidence 1 2234566688888887655
No 154
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.70 E-value=2.3e-15 Score=171.35 Aligned_cols=275 Identities=14% Similarity=0.112 Sum_probs=172.5
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+..++|||||++|||+.... ++....||++|+++|+..+.+.... ....++|| ||+.|+|.+......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~-----G~~~~~i~v~dl~tg~~~~~~~~~~-----k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA-----GSDWREIHLMDVESKQPLETPLKDV-----KFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS-----SCCEEEEEEEETTTCSEEEEEEEEE-----ESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEecC-----CCceEEEEEEECCCCCCCccccCCc-----eeccEEEe-CCCEEEEEEecCccc
Confidence 456789999999999987521 2345899999999998766532110 13577999 999999997652210
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC--CceecCCC-c----eEEeeeeC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP-A----VYTAVEPS 183 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G--~~~~lt~~-~----~~~~~~~S 183 (751)
.. . .. .....+||++++ ++ +.+.+... . ....+.||
T Consensus 199 ~~----------~-~~-------------------------~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 199 SE----------L-SA-------------------------RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp ------------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred cc----------c-cc-------------------------cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 00 0 00 001258999998 44 33455433 3 35688999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCc--eeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
|||++|++.+.... ...++|+++++++ +.++|...... . ...|+++|++ +++..
T Consensus 243 pDg~~l~~~~~~~~---------~~~~i~~~d~~~~~~~~~~l~~~~~~-------------~-~~~~~~~g~~-l~~~t 298 (693)
T 3iuj_A 243 EDDRFLLISAANST---------SGNRLYVKDLSQENAPLLTVQGDLDA-------------D-VSLVDNKGST-LYLLT 298 (693)
T ss_dssp TTSCEEEEEEESSS---------SCCEEEEEETTSTTCCCEEEECSSSS-------------C-EEEEEEETTE-EEEEE
T ss_pred CCCCEEEEEEccCC---------CCcEEEEEECCCCCCceEEEeCCCCc-------------e-EEEEeccCCE-EEEEE
Confidence 99999999865421 1358999999765 45555432211 1 1238999999 66654
Q ss_pred eccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
..+ ..+..|++++++.......+.++....... .|+++|+.|++.... ....+|++++++++ ..+.+.
T Consensus 299 ~~~--------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~-~g~~~l~~~d~~g~--~~~~l~ 366 (693)
T 3iuj_A 299 NRD--------APNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMV-DATARVEQFDYEGK--RVREVA 366 (693)
T ss_dssp CTT--------CTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEE-TTEEEEEEECTTSC--EEEEEC
T ss_pred CCC--------CCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEE-CCeeEEEEEECCCC--eeEEee
Confidence 221 124689999986211111245554433333 899999999987754 34468999999874 334443
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeec
Q 004475 342 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 412 (751)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 412 (751)
......+.. +.+++|++.|++.... ......|+++|+++++.+.+...
T Consensus 367 ~p~~~~~~~------~~~~~d~~~l~~~~ss-----------------~~tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 367 LPGLGSVSG------FNGKHDDPALYFGFEN-----------------YAQPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CSSSSEEEE------CCCCTTCSCEEEEEEC-----------------SSSCCEEEEECTTTCCEEEEECC
T ss_pred cCCCceEEe------eecCCCCCEEEEEecC-----------------CCCCCEEEEEECCCCeEEEEEeC
Confidence 221111111 5678999988887632 12345899999998887766543
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.70 E-value=6.9e-15 Score=152.46 Aligned_cols=281 Identities=12% Similarity=0.058 Sum_probs=158.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcC--CCCeeeccCCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPD 82 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~--~g~~~~lt~~~~ 82 (751)
..|++|++.. +|+.+.+...+........+|||||++|+++.. ....|.+++++ +++.+.+.....
T Consensus 15 ~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR---------PEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp TEEEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEET---------TTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred CeEEEEEECC---CCcEEEeeeEecCCCCceEEECCCCCEEEEeec---------CCCeEEEEEecCCCCceeecccccc
Confidence 4689999953 154444433334445778999999999988652 12455555544 777665533221
Q ss_pred ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
.. .+..++|+|||++|++..... ..|.++
T Consensus 83 ~~---~~~~~~~s~dg~~l~~~~~~~------------------------------------------------~~i~~~ 111 (343)
T 1ri6_A 83 PG---SLTHISTDHQGQFVFVGSYNA------------------------------------------------GNVSVT 111 (343)
T ss_dssp SS---CCSEEEECTTSSEEEEEETTT------------------------------------------------TEEEEE
T ss_pred CC---CCcEEEEcCCCCEEEEEecCC------------------------------------------------CeEEEE
Confidence 11 356789999999988874310 345555
Q ss_pred cC-CCC---cee-cCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC-ceeeeec--cCCCCCCCC
Q 004475 163 SL-DGT---AKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELC--DLPPAEDIP 234 (751)
Q Consensus 163 ~~-~G~---~~~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~--~~~~~~~~~ 234 (751)
++ +|. ... +.....+..++|+|||++|++.... ...+++|++++ ++...+. .....
T Consensus 112 d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~~~~~~---- 175 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK------------QDRICLFTVSDDGHLVAQDPAEVTTV---- 175 (343)
T ss_dssp EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG------------GTEEEEEEECTTSCEEEEEEEEEECS----
T ss_pred ECCCCccccccccccCCCCceEEEECCCCCEEEEecCC------------CCEEEEEEecCCCceeeecccccccC----
Confidence 55 442 222 2222456789999999999876522 24688999876 5444322 11100
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe---e------ceeEE-EE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---L------DLRFS-VS 304 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~------~~~~~-~~ 304 (751)
....++.++|+|||++ ++++.. ..+.+.+++++.. .+....+.. . ..... +.
T Consensus 176 -----~~~~~~~~~~~pdg~~-l~~~~~-----------~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 176 -----EGAGPRHMVFHPNEQY-AYCVNE-----------LNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp -----TTCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred -----CCCCcceEEECCCCCE-EEEEeC-----------CCCEEEEEEecCC-CCcEEEEeeccccCccccccCCccceE
Confidence 1123457899999998 555431 2246777777422 222222111 1 11334 89
Q ss_pred EecCCceEEEeeeecccceeEEEecCC--CCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPG--SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 382 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 382 (751)
|+|||+.|+++.. . ...|.+++++ ++ ..+.+....... ....++|+|||++|++....
T Consensus 238 ~s~dg~~l~v~~~-~--~~~i~v~d~~~~~~--~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~---------- 297 (343)
T 1ri6_A 238 ITPDGRHLYACDR-T--ASLITVFSVSEDGS--VLSKEGFQPTET-----QPRGFNVDHSGKYLIAAGQK---------- 297 (343)
T ss_dssp ECTTSSEEEEEET-T--TTEEEEEEECTTSC--CEEEEEEEECSS-----SCCCEEECTTSSEEEEECTT----------
T ss_pred ECCCCCEEEEEec-C--CCEEEEEEEcCCCC--ceEEeeeecCCC-----ccceEEECCCCCEEEEecCC----------
Confidence 9999998876542 2 2345555554 42 223332111111 01128899999988877621
Q ss_pred ccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 383 NGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
.....+|.+|.++|+.+.+.
T Consensus 298 --------~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 298 --------SHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp --------TCEEEEEEEETTTTEEEEEE
T ss_pred --------CCeEEEEEEcCCCceeeEcc
Confidence 12234555577788766553
No 156
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.70 E-value=1.8e-16 Score=160.59 Aligned_cols=197 Identities=18% Similarity=0.197 Sum_probs=132.8
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 590 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 590 (751)
.|+||++||.+. ....+. ......++++||.|++ .+.+|+|.+.... ....+..+|+..+++
T Consensus 43 ~~~vv~lHG~~~-----------~~~~~~---~~~~~~l~~~g~~vi~---~D~~G~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGG-----------AGRTWH---PHQVPAFLAAGYRCIT---FDNRGIGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTC-----------CGGGGT---TTTHHHHHHTTEEEEE---ECCTTSGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCC-----------chhhcc---hhhhhhHhhcCCeEEE---EccCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 588999999642 111221 1345677889999999 4555666654332 235666777777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccc----------ccccch-------
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT----------EFRTLW------- 653 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~----------~~~~~~------- 653 (751)
.+ +.++++++|||+||.+|+.+|.++|++++++|++++............. .....+
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 76 2358999999999999999999999999999999987542110000000 000000
Q ss_pred --------hh---HHH----H------------------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475 654 --------EA---TNV----Y------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 700 (751)
Q Consensus 654 --------~~---~~~----~------------------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l 700 (751)
.. ... + ........+.++++|+|+++|++|..+| ...++.+.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 00 000 0 0011223457789999999999999998 88887777665
Q ss_pred HhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 701 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 701 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
. .++++++++++|... .+....+.+.+.+||++
T Consensus 258 ~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P----NGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp T----TEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred C----CceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 3 468999999999875 45667888889999875
No 157
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.70 E-value=1.8e-16 Score=155.66 Aligned_cols=195 Identities=12% Similarity=0.084 Sum_probs=128.1
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCch-hHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVE 590 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~ 590 (751)
.|+||++||.+.. ...+. ....+ .+||.|++ .+.+|+|.+..... ...+..+|+.++++
T Consensus 16 ~~~vv~~hG~~~~-----------~~~~~-----~~~~l-~~g~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCN-----------LKIFG-----ELEKY-LEDYNCIL---LDLKGHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCC-----------GGGGT-----TGGGG-CTTSEEEE---ECCTTSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccc-----------HHHHH-----HHHHH-HhCCEEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 6899999996521 11222 11222 38999999 55667776653322 35666777777774
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCCccCccc-----------------cccc-
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLTPFGFQT-----------------EFRT- 651 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~d~~~~~~~~~~-----------------~~~~- 651 (751)
+...+..++ +++++|||+||.+|+.++.+ +|+ ++++|+++|............. ....
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 443333334 89999999999999999999 999 9999999997654111100000 0000
Q ss_pred ---------------chhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004475 652 ---------------LWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 716 (751)
Q Consensus 652 ---------------~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 716 (751)
................+.++++|+|+++|++|..+| ...++.+.+.+. .++++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 000011122334445577889999999999999998 888887777653 47999999999
Q ss_pred CcCCccccHHHHHHHHHHHH
Q 004475 717 HVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 717 H~~~~~~~~~~~~~~~~~fl 736 (751)
|.+. .+....+.+.+.+||
T Consensus 227 H~~~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLL-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHH-HHTHHHHHHHHHTTC
T ss_pred cceE-EecHHHHHHHHHhhC
Confidence 9875 345666667776664
No 158
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=5.9e-17 Score=154.19 Aligned_cols=183 Identities=12% Similarity=0.091 Sum_probs=110.3
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh--CCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 589 (751)
.|+|||+||-+ +++.++. ...+...+.+ .+|.|++ ++.+|+|. +..+++...+
T Consensus 2 mptIl~lHGf~-----------ss~~s~k--~~~l~~~~~~~~~~~~v~~---pdl~~~g~---------~~~~~l~~~~ 56 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSAK--ATTFKSWLQQHHPHIEMQI---PQLPPYPA---------EAAEMLESIV 56 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCHH--HHHHHHHHHHHCTTSEEEC---CCCCSSHH---------HHHHHHHHHH
T ss_pred CcEEEEeCCCC-----------CCCCccH--HHHHHHHHHHcCCCcEEEE---eCCCCCHH---------HHHHHHHHHH
Confidence 38999999931 1222211 1122334454 4599998 44445432 2233333322
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCc----ccccccchhhHHHHHhcCcc
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF----QTEFRTLWEATNVYIEMSPI 665 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 665 (751)
+.+ +.++|+|+|+||||.+|+.+|.++|....+++...+..+........ ....................
T Consensus 57 ~~~------~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 57 MDK------AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHH------TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred Hhc------CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 222 35789999999999999999999988777666555432211000000 00000000111111222334
Q ss_pred cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 666 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 666 ~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
..+.++++|+|++||++|.+|| +.++.++++ ++++.++++++|.+.. ..++++.+.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~---~~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVG---FDHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTT---GGGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCC---HHHHHHHHHHHHh
Confidence 4567788999999999999999 888877752 4589999999998753 3467788999996
No 159
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.70 E-value=2.4e-15 Score=150.70 Aligned_cols=213 Identities=14% Similarity=0.126 Sum_probs=134.0
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+- + .|.||++||.+. +...| ......|+++||.|++ ++.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--g~~vvllHG~~~-----------~~~~w----~~~~~~l~~~g~~vi~---~D~ 54 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPL-----------NGDAW----QDQLKAVVDAGYRGIA---HDR 54 (274)
T ss_dssp EECTTSCEEEEEEEC--------S--SSEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEecC--------C--CceEEEECCCcc-----------hHHHH----HHHHHHHHhCCCeEEE---EcC
Confidence 345567666655442 1 367999999641 11111 1345577889999999 667
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCC--
Q 004475 566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 640 (751)
Q Consensus 566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~-- 640 (751)
+|+|.+... ........+|+.++++.+ +.+++.++||||||.+|+.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 788877542 223556677777777665 235899999999999999977765 899999999886421100
Q ss_pred --CccCccccc------------------------c-------c-------chhh-----H-------HHHHhcCccccc
Q 004475 641 --TPFGFQTEF------------------------R-------T-------LWEA-----T-------NVYIEMSPITHA 668 (751)
Q Consensus 641 --~~~~~~~~~------------------------~-------~-------~~~~-----~-------~~~~~~~~~~~~ 668 (751)
.+....... . . .|.. . ..+........+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 000000000 0 0 0000 0 001111222346
Q ss_pred CCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc-ccHHHHHHHHHHHHH
Q 004475 669 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQ 737 (751)
Q Consensus 669 ~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~ 737 (751)
.++++|+|+++|++|..+| +....+....+ ...++++++++++|..... +..+.+.+.+.+||.
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhh---CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 7889999999999999998 66443333322 1356899999999988632 167788899999984
No 160
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.69 E-value=1.3e-15 Score=151.25 Aligned_cols=205 Identities=15% Similarity=0.064 Sum_probs=135.3
Q ss_pred EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475 486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 565 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 565 (751)
+...+|..+....+-+ .|+||++||.+.. ...+ ......|+ +||.|++ ++.
T Consensus 7 ~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~----~~~~~~l~-~~~~vi~---~d~ 57 (262)
T 3r0v_A 7 VPSSDGTPIAFERSGS----------GPPVVLVGGALST-----------RAGG----APLAERLA-PHFTVIC---YDR 57 (262)
T ss_dssp EECTTSCEEEEEEEEC----------SSEEEEECCTTCC-----------GGGG----HHHHHHHT-TTSEEEE---ECC
T ss_pred EEcCCCcEEEEEEcCC----------CCcEEEECCCCcC-----------hHHH----HHHHHHHh-cCcEEEE---Eec
Confidence 4456777777665431 3689999996411 1111 23344555 8999999 566
Q ss_pred CCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC
Q 004475 566 IGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 644 (751)
Q Consensus 566 ~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~ 644 (751)
+|+|.+.... ....+..+|+.++++.+ + .+++++|||+||.+|+.++.++| +++++|+++|..........
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~ 129 (262)
T 3r0v_A 58 RGRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPP 129 (262)
T ss_dssp TTSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCC
T ss_pred CCCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccch
Confidence 6777765432 23456667766666654 2 58999999999999999999999 99999999987553221110
Q ss_pred ccccc-------------------------ccchhhHHHHH------------------------hcCcccccCCCCCCE
Q 004475 645 FQTEF-------------------------RTLWEATNVYI------------------------EMSPITHANKIKKPI 675 (751)
Q Consensus 645 ~~~~~-------------------------~~~~~~~~~~~------------------------~~~~~~~~~~~~~P~ 675 (751)
..... .......+.+. .......+.++++|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 209 (262)
T 3r0v_A 130 VPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPT 209 (262)
T ss_dssp CCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCE
T ss_pred hhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCE
Confidence 00000 00000000000 001234567889999
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 676 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 676 li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
|+++|++|..+| ...+..+.+.+. .++++++++++|. +....+.+.+.+||+
T Consensus 210 lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 210 LVMDGGASPAWI--RHTAQELADTIP----NARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEECTTCCHHH--HHHHHHHHHHST----TEEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEeecCCCCCC--HHHHHHHHHhCC----CCeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 999999999998 888877776653 4689999999993 356788888999985
No 161
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.69 E-value=3.7e-16 Score=154.92 Aligned_cols=198 Identities=9% Similarity=0.010 Sum_probs=130.5
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 589 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v 589 (751)
|+||++||.+. +...| ......|+++||.|++ ++.+|+|.+.... ....+..+|+.+++
T Consensus 5 ~~vv~lHG~~~-----------~~~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYH-----------GAWIW----YKLKPLLESAGHRVTA---VELAASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTC-----------CGGGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCC-----------ccccH----HHHHHHHHhCCCEEEE---ecCCCCcCCCCCCCccccHHHhHHHHHHHH
Confidence 89999999642 11222 2456678889999999 6667888775432 23445555555555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC------------cccc-cc------
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG------------FQTE-FR------ 650 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~------------~~~~-~~------ 650 (751)
+.+ . . ..+++++|||+||.+|+.++.++|++++++|++++.......... +... ..
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRN 141 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETT
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhc
Confidence 444 2 1 268999999999999999999999999999999885432211100 0000 00
Q ss_pred ----cch----------------hhHHHH--------------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 651 ----TLW----------------EATNVY--------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 651 ----~~~----------------~~~~~~--------------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
..+ .....+ ............++|+|+++|++|..+| +..++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~ 219 (258)
T 3dqz_A 142 GTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRWM 219 (258)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHHH
T ss_pred cChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHHH
Confidence 000 000000 0001111222236999999999999998 8888877
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
.+.+. .++++++++++|... .+....+.+.+.+|+++++
T Consensus 220 ~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 220 IDNFN----VSKVYEIDGGDHMVM-LSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHSC----CSCEEEETTCCSCHH-HHSHHHHHHHHHHHHHHTC
T ss_pred HHhCC----cccEEEcCCCCCchh-hcChHHHHHHHHHHHHHhC
Confidence 77663 347899999999876 5678889999999998864
No 162
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.69 E-value=5.7e-16 Score=162.46 Aligned_cols=177 Identities=15% Similarity=0.138 Sum_probs=120.7
Q ss_pred HHhCCeEEEEcCCCCCCC--CCCCCCC---------------chhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEEeChH
Q 004475 550 FLARRFAVLAGPSIPIIG--EGDKLPN---------------DRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYG 611 (751)
Q Consensus 550 ~~~~G~~v~~~~~~~~~g--~g~~~~~---------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i-~l~G~S~G 611 (751)
|+++||.|+++| .+| +|.+... .....+..+|+.++++.+ +.+++ .|+|||||
T Consensus 85 l~~~g~~vi~~D---~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~G 155 (366)
T 2pl5_A 85 FDTNQYFIICSN---VIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMG 155 (366)
T ss_dssp EETTTCEEEEEC---CTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHH
T ss_pred ccccccEEEEec---CCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCcc
Confidence 357899999944 455 5544321 123556666666666544 34688 79999999
Q ss_pred HHHHHHHHHhCCCceeEEEEccCCCCCCCCc----------------cC---c---------------------------
Q 004475 612 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP----------------FG---F--------------------------- 645 (751)
Q Consensus 612 G~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~----------------~~---~--------------------------- 645 (751)
|.+|+.+|.++|++++++|++++........ +. +
T Consensus 156 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (366)
T 2pl5_A 156 GMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMR 235 (366)
T ss_dssp HHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHH
T ss_pred HHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHH
Confidence 9999999999999999999999865421000 00 0
Q ss_pred -------cc-------ccccchh-----------hH-------HHHHhcCc------ccccCCCCCCEEEEEcCCCCCCC
Q 004475 646 -------QT-------EFRTLWE-----------AT-------NVYIEMSP------ITHANKIKKPILIIHGEVDDKVG 687 (751)
Q Consensus 646 -------~~-------~~~~~~~-----------~~-------~~~~~~~~------~~~~~~~~~P~li~~G~~D~~vp 687 (751)
.. .....+. .. ..+..... ...+.++++|+|+++|++|.++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 315 (366)
T 2pl5_A 236 EKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP 315 (366)
T ss_dssp HHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC
T ss_pred HHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC
Confidence 00 0000000 00 01111111 12567889999999999999999
Q ss_pred CChHHHHHHHHHHHhCCCcEEEEEe-CCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 688 LFPMQAERFFDALKGHGALSRLVLL-PFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 688 ~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+..++.+.+.+...+..++++++ ++++|... .+....+.+.+.+||++
T Consensus 316 --~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 316 --PAQSREIVKSLEAADKRVFYVELQSGEGHDSF-LLKNPKQIEILKGFLEN 364 (366)
T ss_dssp --HHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG-GSCCHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHhhhcccCeEEEEeCCCCCcchh-hcChhHHHHHHHHHHcc
Confidence 99999999999877667899999 89999886 45567888999999874
No 163
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.69 E-value=3.9e-17 Score=173.59 Aligned_cols=232 Identities=16% Similarity=0.129 Sum_probs=150.2
Q ss_pred EEcCCCceEEEEEEcCCCC-CCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH----hCCe---EE
Q 004475 486 YQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF---AV 557 (751)
Q Consensus 486 ~~~~~~~~i~~~~~~P~~~-~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~G~---~v 557 (751)
+...+|..+.+..+.|.+. .....++.|+||++||.+... ..|. .+...|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-----------~~~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-----------VVWE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-----------GGGG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-----------HHHH----HHHHHHHHhhhhcCcceeEE
Confidence 3356888999999987541 011123468999999975211 1121 2234455 3489 99
Q ss_pred EEcCCCCCCCCCCCCC-------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004475 558 LAGPSIPIIGEGDKLP-------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 630 (751)
Q Consensus 558 ~~~~~~~~~g~g~~~~-------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 630 (751)
++ ++.+|+|.+.. ......+..+|+.++++.+.....+++.+++++||||||.+|+.+|.++|++++++|
T Consensus 90 i~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LL---IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EE---ECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EE---EcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 99 55667765532 122345667777777776532212344459999999999999999999999999999
Q ss_pred EccCCCCCCC--------CccC---ccc--------ccc----------------cchh--hH---HHHHh---------
Q 004475 631 ARSGSYNKTL--------TPFG---FQT--------EFR----------------TLWE--AT---NVYIE--------- 661 (751)
Q Consensus 631 ~~~~~~d~~~--------~~~~---~~~--------~~~----------------~~~~--~~---~~~~~--------- 661 (751)
+++|...... .... ... ... ..+. .+ +.+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998755311 0000 000 000 0000 00 01100
Q ss_pred -------------------c--------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 004475 662 -------------------M--------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 714 (751)
Q Consensus 662 -------------------~--------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~ 714 (751)
+ .....+.++++|+|+++|++|.++| +..++.+.+.+. .++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~~----~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTLQ----NYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhCC----CceEEEeCC
Confidence 0 0113456789999999999999998 888877776653 578999999
Q ss_pred CCCcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 715 EHHVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 715 ~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
++|... .+....+.+.+.+||.+++..
T Consensus 321 ~gH~~~-~e~p~~~~~~i~~fl~~~~~~ 347 (398)
T 2y6u_A 321 GSHLVN-VEAPDLVIERINHHIHEFVLT 347 (398)
T ss_dssp CCTTHH-HHSHHHHHHHHHHHHHHHHHH
T ss_pred CCccch-hcCHHHHHHHHHHHHHHHHHh
Confidence 999875 456778999999999988764
No 164
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.69 E-value=1.7e-16 Score=167.21 Aligned_cols=153 Identities=10% Similarity=0.036 Sum_probs=105.7
Q ss_pred cCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCC---CccCCCCchHHHHHHhC
Q 004475 477 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP---NEFSGMTPTSSLIFLAR 553 (751)
Q Consensus 477 ~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 553 (751)
..+..+.+.+++.+|..+.++++.|++. ++++|+||++||.|....+..+.....+ ..+.......+..|+++
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 4467788999988999999999999763 3468999999997532110000000000 00000011457788999
Q ss_pred CeEEEEcCCCCCCCCCCCCCC--------chh--------------HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChH
Q 004475 554 RFAVLAGPSIPIIGEGDKLPN--------DRF--------------VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYG 611 (751)
Q Consensus 554 G~~v~~~~~~~~~g~g~~~~~--------~~~--------------~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~G 611 (751)
||+|+++| .+|+|.+... ..+ ....+.|+..++++|.+++.+|++||+++|||||
T Consensus 159 G~~Vl~~D---~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~G 235 (391)
T 3g8y_A 159 GYVAVAVD---NAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLG 235 (391)
T ss_dssp TCEEEECC---CTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGG
T ss_pred CCEEEEec---CCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChh
Confidence 99999954 4555554322 111 1122478999999999998899999999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEccCCCC
Q 004475 612 AFMTAHLLAHAPHLFCCGIARSGSYN 637 (751)
Q Consensus 612 G~~a~~~a~~~p~~~~~~v~~~~~~d 637 (751)
|++|+.+++.. ++++++|+.+++..
T Consensus 236 G~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 236 TEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHHHHHcC-CceeEEEEccCCCC
Confidence 99999998887 57899988776544
No 165
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=7.8e-15 Score=152.57 Aligned_cols=299 Identities=11% Similarity=-0.013 Sum_probs=162.3
Q ss_pred CCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 59 ~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.....+|.+|.++|+.+++...... .....++|||||+ |++.....
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~~------------------------------ 60 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKED------------------------------ 60 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEET------------------------------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEecC------------------------------
Confidence 3446788888888877665322211 1245789999999 77663310
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-CCCceecCC---C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~---~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
....|+++++ +|+.+.+.. . .....++|||||++|++.... ...+.+
T Consensus 61 ----------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------------~~~v~v 112 (347)
T 3hfq_A 61 ----------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------------KGTAEV 112 (347)
T ss_dssp ----------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred ----------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------------CCEEEE
Confidence 0157888888 665555543 2 455678999999999887533 235777
Q ss_pred EeCC-CceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCce
Q 004475 214 WTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE 292 (751)
Q Consensus 214 ~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 292 (751)
|+++ ++..+.+.........|. .......+..++|+|||+ ++++.. ..+.+++++++ . ++...
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~--l~v~~~-----------~~~~v~~~~~~-~-~g~~~ 176 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR--LAVIDL-----------GSDKVYVYNVS-D-AGQLS 176 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC--EEEEET-----------TTTEEEEEEEC-T-TSCEE
T ss_pred EEeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc--EEEEeC-----------CCCEEEEEEEC-C-CCcEE
Confidence 8774 333443322211111111 011112345789999999 344321 22467788774 1 22333
Q ss_pred EeEe---ece-eEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccc--cCCCCCCCeeeCCCCCE
Q 004475 293 ILHK---LDL-RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV--YSDPGSPMMTRTSTGTN 365 (751)
Q Consensus 293 ~l~~---~~~-~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~spDG~~ 365 (751)
.+.. ..+ ... ++|||||++|++.... ...-.+|.++..++ ..+.+........ ........++|||||++
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 2221 111 334 8999999988775532 22234555554343 2222221111000 00000112789999999
Q ss_pred EEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC-CCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEE
Q 004475 366 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 444 (751)
Q Consensus 366 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 444 (751)
|++.... ...|.+|+++ +|+.+.+...... ...+..++|||||++|++..
T Consensus 254 l~v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 254 LYVSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEE
T ss_pred EEEEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEE
Confidence 8776621 2367777775 3343333221110 01133478999999887765
Q ss_pred ecCCCCCeEEEEEcCCCceeEeec
Q 004475 445 ESKTEITQYHILSWPLKKSSQITN 468 (751)
Q Consensus 445 ~~~~~~~~l~~~~~~~g~~~~lt~ 468 (751)
.. ...-.+|.+|..+|+.+++..
T Consensus 305 ~~-~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 305 QN-TDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TT-TTEEEEEEECTTTCCEEEEEE
T ss_pred cC-CCcEEEEEEeCCCCeEEeccc
Confidence 33 223446666888888776654
No 166
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.69 E-value=6e-16 Score=157.88 Aligned_cols=216 Identities=13% Similarity=0.066 Sum_probs=135.7
Q ss_pred EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475 482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 561 (751)
Q Consensus 482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~ 561 (751)
+...+.. ++..+.++.+-+.+ .|+||++||++. +...|. .....|++ ||.|++
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~~--------~~~vv~lHG~~~-----------~~~~~~----~~~~~L~~-g~~vi~-- 98 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPED--------APPLVLLHGALF-----------SSTMWY----PNIADWSS-KYRTYA-- 98 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCTT--------SCEEEEECCTTT-----------CGGGGT----TTHHHHHH-HSEEEE--
T ss_pred ceEEEec-CCceEEEEeeCCCC--------CCeEEEECCCCC-----------CHHHHH----HHHHHHhc-CCEEEE--
Confidence 4444443 45567666654322 588999999751 112222 23445565 999999
Q ss_pred CCCCCCC-CCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475 562 SIPIIGE-GDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 638 (751)
Q Consensus 562 ~~~~~g~-g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~ 638 (751)
++.+|+ |.+.. ......+..+|+..+++.+ +.++++++|||+||.+|+.+|.++|++++++|+++|....
T Consensus 99 -~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 99 -VDIIGDKNKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp -ECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred -ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 455566 44422 2233456666666666654 2368999999999999999999999999999999987653
Q ss_pred CCCccCccc----c------------------cccchh-hHHHH-Hh-----------------cCcccccCCCCCCEEE
Q 004475 639 TLTPFGFQT----E------------------FRTLWE-ATNVY-IE-----------------MSPITHANKIKKPILI 677 (751)
Q Consensus 639 ~~~~~~~~~----~------------------~~~~~~-~~~~~-~~-----------------~~~~~~~~~~~~P~li 677 (751)
......... . ....+. ..... .. ......+.++++|+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 251 (306)
T 2r11_A 172 LPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILL 251 (306)
T ss_dssp SCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEE
T ss_pred CcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEE
Confidence 211100000 0 000000 00000 00 0111234578899999
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 678 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 678 ~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
++|++|.++| ...+.++.+.+. ..++++++++++|... .+....+.+.+.+||+
T Consensus 252 i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 252 LLGEHEVIYD--PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EEETTCCSSC--HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EEeCCCcccC--HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 9999999998 877766655432 3568999999999865 4556788888999885
No 167
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.69 E-value=3.9e-15 Score=149.04 Aligned_cols=240 Identities=8% Similarity=0.017 Sum_probs=170.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeeccccccc----CCceeEEEEEcCCCCeeeccCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVS----SCKLRVWIADAETGEAKPLFES 80 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~----~~~~~l~i~~~~~g~~~~lt~~ 80 (751)
..||.++.++ ...++|+. ...--++|||++|+|+...++..... .....||.+++++++.++|+..
T Consensus 37 ~~ly~~~~dg----~~~~~l~~------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~ 106 (302)
T 3s25_A 37 GRLYAMNIDG----SNIHKLSN------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD 106 (302)
T ss_dssp TEEEEEETTS----CSCEEEEE------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS
T ss_pred ceEEEEcCCC----CCCEEccC------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC
Confidence 3599999999 88888872 12356899999999997643111000 1357999999999998888755
Q ss_pred CCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 81 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
.. ..|+|+|++|+|...... ....|+
T Consensus 107 ~~---------~~~s~~g~~Iy~~~~~~~---------------------------------------------~~~~Iy 132 (302)
T 3s25_A 107 PC---------IYASLIGNYIYYLHYDTQ---------------------------------------------TATSLY 132 (302)
T ss_dssp CE---------EEEEEETTEEEEEEESSS---------------------------------------------SCEEEE
T ss_pred Cc---------cEEEEeCCEEEEEeecCC---------------------------------------------CCceEE
Confidence 43 278999999999841100 116899
Q ss_pred EEcCCC-CceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 161 LGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 161 ~~~~~G-~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
+++++| +.++|+.... ..++|||+.|+++... ...|++.+++++..++|.....
T Consensus 133 ~~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g------------~~~Iy~~~l~g~~~~~l~~~~~---------- 187 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPK------------NGQLYRYDTASQSEALFYDCNC---------- 187 (302)
T ss_dssp EEETTSCCCEEEESSCC---CCSEEETTEEEEECTT------------TCCEEEEETTTTEEEEEECSCE----------
T ss_pred EEECCCCCeEEEeCCCc---eEeeEECCEEEEEeCC------------CceEEEEECCCCCEEEEeCCCc----------
Confidence 999987 7778876633 5689999999998652 3479999999988777743211
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeec
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYK 319 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~ 319 (751)
...++|+|++ |+|+... ...+|++.+++ +...+.|+.... +.|+|+|++|+|.....
T Consensus 188 ------~~~~~P~g~~-iy~t~~~----------~~~~I~~~~ld---G~~~~~Lt~~~~---~~~~~~g~~Iy~~~~~~ 244 (302)
T 3s25_A 188 ------YKPVVLDDTN-VYYMDVN----------RDNAIVHVNIN---NPNPVVLTEANI---EHYNVYGSLIFYQRGGD 244 (302)
T ss_dssp ------EEEEEEETTE-EEEEEGG----------GTTEEEEECSS---SCCCEECSCSCE---EEEEEETTEEEEEECSS
T ss_pred ------cceeeecCCE-EEEEEcC----------CCcEEEEEECC---CCCeEEEeCCCc---ceEEECCCEEEEEECCC
Confidence 1245699999 8887521 12479999997 667777764332 57899999999876432
Q ss_pred ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 320 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 320 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
...|+.+++++. ..++|.... . ...++.+.+|+|...
T Consensus 245 --~~~i~~~~~DG~--~r~~l~~~~--~---------~~i~i~~d~Iy~td~ 281 (302)
T 3s25_A 245 --NPALCVVKNDGT--GFKELAKGE--F---------CNINVTSQYVYFTDF 281 (302)
T ss_dssp --SCEEEEEETTSC--CCEEEEESC--E---------EEEEECSSEEEEEET
T ss_pred --CcEEEEEECCCC--ccEEeeCCc--c---------ceEEEeCCEEEEEEC
Confidence 368999999994 556665432 1 446788999999873
No 168
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.68 E-value=6.8e-16 Score=155.22 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=130.5
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.+..+.|.+ .|+||++||.+.. ...+ ......|+++||.|++ ++.+|+
T Consensus 11 ~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~-----------~~~~----~~~~~~l~~~G~~v~~---~d~~G~ 64 (286)
T 3qit_A 11 FGGNQICLCSWGSPE--------HPVVLCIHGILEQ-----------GLAW----QEVALPLAAQGYRVVA---PDLFGH 64 (286)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCceEEEeecCCCC--------CCEEEEECCCCcc-----------cchH----HHHHHHhhhcCeEEEE---ECCCCC
Confidence 477889888886543 5899999997421 1111 2456688899999999 556677
Q ss_pred CCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC
Q 004475 569 GDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 644 (751)
Q Consensus 569 g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~ 644 (751)
|.+.... ....+..+|+..+++.+ +..+++++|||+||.+|+.++.++|++++++|++++..........
T Consensus 65 G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 138 (286)
T 3qit_A 65 GRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE 138 (286)
T ss_dssp TTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch
Confidence 7765432 22344555555555443 3468999999999999999999999999999999987553222100
Q ss_pred ---------------------ccccc---------ccchh--hHHHH---------------------------------
Q 004475 645 ---------------------FQTEF---------RTLWE--ATNVY--------------------------------- 659 (751)
Q Consensus 645 ---------------------~~~~~---------~~~~~--~~~~~--------------------------------- 659 (751)
+.... ...+. ....+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3qit_A 139 SAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPG 218 (286)
T ss_dssp CHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTT
T ss_pred hhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccccc
Confidence 00000 00000 00000
Q ss_pred HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHH
Q 004475 660 IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 731 (751)
Q Consensus 660 ~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 731 (751)
........+.++++|+|+++|++|..+| ...+..+.+.+. .++++++++ +|... .+....+.+.
T Consensus 219 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g-gH~~~-~e~p~~~~~~ 282 (286)
T 3qit_A 219 GRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMT----QAKRVFLSG-GHNLH-IDAAAALASL 282 (286)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHST----TSEEEEESS-SSCHH-HHTHHHHHHH
T ss_pred chhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCC----CCeEEEeeC-CchHh-hhChHHHHHH
Confidence 1111122345689999999999999998 888877776653 358999999 99875 3444444433
No 169
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=1.4e-14 Score=149.58 Aligned_cols=290 Identities=12% Similarity=-0.008 Sum_probs=170.6
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcc-cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~ 81 (751)
...|+++|+.+ ++......++... ....++|||||++++++. .....|+++++.+++... +....
T Consensus 10 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 10 PDKLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------NKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp TTEEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------TTTTEEEEEETTTCCEEEEEECCB
T ss_pred CCeEEEEECCC----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---------CCCCeEEEEECCCCCeEeeEEcCC
Confidence 45799999988 8776544333311 367899999999987764 344789999999888654 32221
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
..........++|||||++|++.......... . +. .....|++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~--------------~---------~~--------------~~~~~i~v 119 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELT--------------H---------FE--------------VQPTRVAL 119 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSS--------------C---------EE--------------ECCCEEEE
T ss_pred cccccccccceEECCCCCEEEEEecccccccc--------------c---------cc--------------ccCceEEE
Confidence 00000024578999999999887421000000 0 00 00157899
Q ss_pred EcC-CCCc-eecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 162 GSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 162 ~~~-~G~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
+|+ +++. +.+........++|||||++|++. . ..+++||+++++..........
T Consensus 120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~-------------~~i~~~d~~~~~~~~~~~~~~~--------- 175 (337)
T 1pby_B 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--G-------------RDLHVMDPEAGTLVEDKPIQSW--------- 175 (337)
T ss_dssp EETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--S-------------SSEEEEETTTTEEEEEECSTTT---------
T ss_pred EECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--C-------------CeEEEEECCCCcEeeeeecccc---------
Confidence 999 5543 333333456678899999999887 1 2589999987765433221110
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCC------------CCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EE
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRG------------DANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VS 304 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~ 304 (751)
...+.|+|||+. +++....+.. ...........|++++++ ++....+. ....... +.
T Consensus 176 ----~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~ 247 (337)
T 1pby_B 176 ----EAETYAQPDVLA-VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE---TGEMAMREVRIMDVFYFSTA 247 (337)
T ss_dssp ----TTTTBCCCBCCC-CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT---TCCEEEEEEEECSSCEEEEE
T ss_pred ----CCCceeCCCccE-EeeeccCCCceeeeeeccccccccccccccccceEEEeCC---CCCceEeecCCCCCceeeEE
Confidence 113488999987 4432211000 000000111267888885 33333222 2223344 89
Q ss_pred EecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEcc
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 384 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~ 384 (751)
|+|||+.|+.. ...|+++++.++ +......... .... ++|+|||++|++...
T Consensus 248 ~s~dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~~-~~~~------~~~s~dg~~l~~~~~------------- 299 (337)
T 1pby_B 248 VNPAKTRAFGA------YNVLESFDLEKN--ASIKRVPLPH-SYYS------VNVSTDGSTVWLGGA------------- 299 (337)
T ss_dssp ECTTSSEEEEE------ESEEEEEETTTT--EEEEEEECSS-CCCE------EEECTTSCEEEEESB-------------
T ss_pred ECCCCCEEEEe------CCeEEEEECCCC--cCcceecCCC-ceee------EEECCCCCEEEEEcC-------------
Confidence 99999998776 257899998874 2222222111 1111 789999998877642
Q ss_pred CCCCCCCCCceeEEEecCCCceeEEee
Q 004475 385 RGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 385 ~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
...|.+||+++++....+.
T Consensus 300 --------~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 300 --------LGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp --------SSEEEEEETTTCCEEEEEE
T ss_pred --------CCcEEEEECcCCcEEEEEE
Confidence 2378899999887655443
No 170
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.68 E-value=2.9e-16 Score=157.73 Aligned_cols=197 Identities=15% Similarity=0.124 Sum_probs=131.4
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc----h--hHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----R--FVEQLVSSA 585 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~----~--~~~~~~~d~ 585 (751)
.|+||++||.+.. ...+. .....|++ ||.|++ .+.+|+|.+.... . ...+..+|+
T Consensus 28 ~~~vv~lHG~~~~-----------~~~~~----~~~~~l~~-g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCD-----------QNMWR----FMLPELEK-QFTVIV---FDYVGSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEE---CCCTTSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------cchHH----HHHHHHhc-CceEEE---EecCCCCCCCCCCCCccccccHHHHHHHH
Confidence 3899999996421 11222 23455555 999999 6667777765432 1 345556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccc---------------c
Q 004475 586 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF---------------R 650 (751)
Q Consensus 586 ~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~---------------~ 650 (751)
.++++.+ +..+++++|||+||.+|+.++.++|++++++|+++|..........+.... .
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 6665554 346899999999999999999999999999999998643221100000000 0
Q ss_pred cchh---------------------------hH-------HHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 651 TLWE---------------------------AT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 651 ~~~~---------------------------~~-------~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
..|. .. ...........+.++++|+|+++|++|..+| ...+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 0000 00 0011122334567789999999999999998 8888777
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
.+.+. .++++++++++|... .+....+.+.+.+||.++.
T Consensus 241 ~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENIP----NSQLELIQAEGHCLH-MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHC-
T ss_pred HHhCC----CCcEEEecCCCCccc-ccCHHHHHHHHHHHHHhcC
Confidence 76653 468999999999976 4557788999999998764
No 171
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.68 E-value=1.7e-16 Score=159.09 Aligned_cols=193 Identities=14% Similarity=0.100 Sum_probs=125.6
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc----hhHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----RFVEQLVSSAEA 587 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~----~~~~~~~~d~~~ 587 (751)
.|+||++||.+.. ...+.. ....|++ ||.|++ ++.+|+|.+.... ....+..+|+.+
T Consensus 23 ~~~vv~~HG~~~~-----------~~~~~~----~~~~L~~-~~~vi~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 83 (278)
T 3oos_A 23 GPPLCVTHLYSEY-----------NDNGNT----FANPFTD-HYSVYL---VNLKGCGNSDSAKNDSEYSMTETIKDLEA 83 (278)
T ss_dssp SSEEEECCSSEEC-----------CTTCCT----TTGGGGG-TSEEEE---ECCTTSTTSCCCSSGGGGSHHHHHHHHHH
T ss_pred CCeEEEEcCCCcc-----------hHHHHH----HHHHhhc-CceEEE---EcCCCCCCCCCCCCcccCcHHHHHHHHHH
Confidence 4789999997421 122221 2234444 999999 5666787775432 124455565555
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-----cCccccc------------c
Q 004475 588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----FGFQTEF------------R 650 (751)
Q Consensus 588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-----~~~~~~~------------~ 650 (751)
+++.+ +.++++++|||+||.+|+.++.++|++++++|+.++........ ....... .
T Consensus 84 ~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T 3oos_A 84 IREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALND 157 (278)
T ss_dssp HHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTC
T ss_pred HHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcc
Confidence 55544 33589999999999999999999999999999999875511000 0000000 0
Q ss_pred ------------cch-------------------------hhHHHHH-----hcCcccccCCCCCCEEEEEcCCCCCCCC
Q 004475 651 ------------TLW-------------------------EATNVYI-----EMSPITHANKIKKPILIIHGEVDDKVGL 688 (751)
Q Consensus 651 ------------~~~-------------------------~~~~~~~-----~~~~~~~~~~~~~P~li~~G~~D~~vp~ 688 (751)
..| .....+. ..+....+.++++|+|+++|++|..+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~- 236 (278)
T 3oos_A 158 DSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCP- 236 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSC-
T ss_pred cccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCC-
Confidence 000 0000011 122234567889999999999999998
Q ss_pred ChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 689 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 689 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
...++.+.+.+ ..++++++++++|... .+....+.+.+.+||
T Consensus 237 -~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 237 -YIFSCEIANLI----PNATLTKFEESNHNPF-VEEIDKFNQFVNDTL 278 (278)
T ss_dssp -HHHHHHHHHHS----TTEEEEEETTCSSCHH-HHSHHHHHHHHHHTC
T ss_pred -HHHHHHHHhhC----CCcEEEEcCCcCCCcc-cccHHHHHHHHHhhC
Confidence 88888887766 3579999999999975 456667777777764
No 172
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.68 E-value=2e-14 Score=148.60 Aligned_cols=287 Identities=10% Similarity=0.062 Sum_probs=163.4
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
.+...+|||||+.|+-.+.. ..+--...+++++...... ..... ........+..++|+||++ |+..+.+
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~----~~r~Wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~d~~-l~~~s~d--- 102 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSL----SGRCWAGSLWLFKDPCAAPNEGFCS-AGVQTEAGVADLTWVGERG-ILVASDS--- 102 (344)
T ss_dssp EEEEEEECTTSCEEEEEECC----SSSCCCEEEEEESSGGGTTCGGGCS-EEEEESSCEEEEEEETTTE-EEEEETT---
T ss_pred CEEEEEECCCCCEEEEEeCC----ceEEeeceeeeeccccccCCcceee-eeeccCCCEEEEEEeCCCe-EEEEECC---
Confidence 46789999999999875421 0001124555554322111 11100 0000112477899999975 5544332
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce-e----cCCC-ceEEeeeeC
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-D----FGTP-AVYTAVEPS 183 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~----lt~~-~~~~~~~~S 183 (751)
..|.++|+ +|+.. . +..+ ..+..++||
T Consensus 103 ----------------------------------------------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s 136 (344)
T 4gqb_B 103 ----------------------------------------------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVL 136 (344)
T ss_dssp ----------------------------------------------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC
T ss_pred ----------------------------------------------CEEEEEeccCCCceeEeeccccCCCCCEEEEEEC
Confidence 46777777 55321 1 1223 678899999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEec
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~ 263 (751)
|||++|+..+.+ ..|.+||+.+++..... ......+..+.|+|+++.+++-.+
T Consensus 137 pdg~~l~sgs~d-------------~~i~iwd~~~~~~~~~~------------~~h~~~V~~~~~~~~~~~~l~s~s-- 189 (344)
T 4gqb_B 137 SSGTQAVSGSKD-------------ICIKVWDLAQQVVLSSY------------RAHAAQVTCVAASPHKDSVFLSCS-- 189 (344)
T ss_dssp TTSSEEEEEETT-------------SCEEEEETTTTEEEEEE------------CCCSSCEEEEEECSSCTTEEEEEE--
T ss_pred CCCCEEEEEeCC-------------CeEEEEECCCCcEEEEE------------cCcCCceEEEEecCCCCCceeeec--
Confidence 999999876543 35889999877544221 112234668999999988334333
Q ss_pred cCCCCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCce-EEEeeeecccceeEEEecCCCCCCccee
Q 004475 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRV 339 (751)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~-l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (751)
..+.|.++|+.. +.....+. .....+. +.|+|++.. |+... ....|.+.|+.++ +...
T Consensus 190 ----------~D~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~----~dg~v~~wd~~~~--~~~~ 251 (344)
T 4gqb_B 190 ----------EDNRILLWDTRC--PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD----ENGTVSLVDTKST--SCVL 251 (344)
T ss_dssp ----------TTSCEEEEETTS--SSCEEECC----CCCEEEEEECSSCTTEEEEEE----TTSEEEEEESCC----CCE
T ss_pred ----------cccccccccccc--cceeeeeecceeeccceeeeecCCCCcceEEec----cCCcEEEEECCCC--cEEE
Confidence 235788888751 22223332 1223345 899997655 44433 2245667777764 2222
Q ss_pred eeecccccccCCCCCCCeeeCCCCCE-EEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhh
Q 004475 340 LFDRVFENVYSDPGSPMMTRTSTGTN-VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 418 (751)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~spDG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 418 (751)
........+.. ++|||||.. |+..+.+ ..|++||+.+++..++.....
T Consensus 252 ~~~~h~~~v~~------v~fsp~g~~~lasgs~D---------------------~~i~vwd~~~~~~~~~~~H~~---- 300 (344)
T 4gqb_B 252 SSAVHSQCVTG------LVFSPHSVPFLASLSED---------------------CSLAVLDSSLSELFRSQAHRD---- 300 (344)
T ss_dssp EEECCSSCEEE------EEECSSSSCCEEEEETT---------------------SCEEEECTTCCEEEEECCCSS----
T ss_pred EEcCCCCCEEE------EEEccCCCeEEEEEeCC---------------------CeEEEEECCCCcEEEEcCCCC----
Confidence 22222233333 889999964 5555522 268999999887655432221
Q ss_pred hceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 419 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 419 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
.+.. ++||||++.|+.+..... .|.++++.+
T Consensus 301 -~V~~-------v~~sp~~~~llas~s~D~---~v~~w~v~~ 331 (344)
T 4gqb_B 301 -FVRD-------ATWSPLNHSLLTTVGWDH---QVVHHVVPT 331 (344)
T ss_dssp -CEEE-------EEECSSSTTEEEEEETTS---CEEEEECCC
T ss_pred -CEEE-------EEEeCCCCeEEEEEcCCC---eEEEEECCC
Confidence 1222 589999998887765433 466677654
No 173
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.68 E-value=3.6e-16 Score=155.84 Aligned_cols=199 Identities=10% Similarity=0.011 Sum_probs=130.4
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEA 587 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~ 587 (751)
..|+||++||.+. +...| ......|+++||.|++ ++.+|+|.+.... ....+..+|+.+
T Consensus 11 ~~~~vvllHG~~~-----------~~~~~----~~~~~~l~~~g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 72 (267)
T 3sty_A 11 VKKHFVLVHAAFH-----------GAWCW----YKIVALMRSSGHNVTA---LDLGASGINPKQALQIPNFSDYLSPLME 72 (267)
T ss_dssp CCCEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHH
T ss_pred CCCeEEEECCCCC-----------CcchH----HHHHHHHHhcCCeEEE---eccccCCCCCCcCCccCCHHHHHHHHHH
Confidence 3689999999641 11112 2456677888999999 6667888775542 234555565555
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc--------------cC---cc--cc
Q 004475 588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--------------FG---FQ--TE 648 (751)
Q Consensus 588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~--------------~~---~~--~~ 648 (751)
+++.+ . +..++.++||||||.+|+.++.++|++++++|++++........ +. +. ..
T Consensus 73 ~l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T 3sty_A 73 FMASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENG 147 (267)
T ss_dssp HHHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTC
T ss_pred HHHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhh
Confidence 55544 1 34689999999999999999999999999999988864321100 00 00 00
Q ss_pred ----cccch----------------hhHHH---------------HHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHH
Q 004475 649 ----FRTLW----------------EATNV---------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 649 ----~~~~~----------------~~~~~---------------~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~ 693 (751)
....+ ..... +............++|+|+++|++|..+| +..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~ 225 (267)
T 3sty_A 148 PTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFL 225 (267)
T ss_dssp TTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHH
T ss_pred hhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHH
Confidence 00000 00000 11111111122235999999999999998 7887
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
+.+.+.+. .++++++++++|... .+..+.+.+.+.+|++++
T Consensus 226 ~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 226 KLMIEKNP----PDEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHSC----CSEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHHhCC----CceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 77776653 368999999999876 567788999999999864
No 174
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.68 E-value=7.5e-15 Score=150.60 Aligned_cols=248 Identities=12% Similarity=0.100 Sum_probs=158.8
Q ss_pred cceeEEeecCCCCCCCCcccccCCCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~ 82 (751)
...|.+|++.+ ++......+.. ...+....|+||++.++..+ ....|.++++.+++.........
T Consensus 57 D~~v~vW~~~~----~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s----------~D~~i~lWd~~~~~~~~~~~~~~ 122 (321)
T 3ow8_A 57 DDLVKVWKWRD----ERLDLQWSLEGHQLGVVSVDISHTLPIAASSS----------LDAHIRLWDLENGKQIKSIDAGP 122 (321)
T ss_dssp TSCEEEEEEET----TEEEEEEEECCCSSCEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCT
T ss_pred CCCEEEEECCC----CCeeeeeeeccCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCCEEEEEeCCC
Confidence 34688888876 54332211222 23578899999999888753 34688888998876443322221
Q ss_pred ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
. .+..++|+|||++|+..+.+ ..+.++
T Consensus 123 ~----~~~~~~~spdg~~l~~g~~d-------------------------------------------------g~v~i~ 149 (321)
T 3ow8_A 123 V----DAWTLAFSPDSQYLATGTHV-------------------------------------------------GKVNIF 149 (321)
T ss_dssp T----CCCCEEECTTSSEEEEECTT-------------------------------------------------SEEEEE
T ss_pred c----cEEEEEECCCCCEEEEEcCC-------------------------------------------------CcEEEE
Confidence 1 25678999999999887432 467777
Q ss_pred cC-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 163 SL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 163 ~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
++ +++ ...+... ..+..++|+|||++|+....+ ..+.+||+.+++...... .
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~------------~ 204 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID-------------GIINIFDIATGKLLHTLE------------G 204 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEEC------------C
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCcEEEEEc------------c
Confidence 77 553 3334334 667899999999999876543 358899998765432211 1
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY 318 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~ 318 (751)
....+..++|+|||+. |+..+ ..+.|.++++.. +.....+......+. ++|+|||+.|+.++.
T Consensus 205 h~~~v~~l~~spd~~~-l~s~s------------~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~- 268 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQL-LVTAS------------DDGYIKIYDVQH--ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS- 268 (321)
T ss_dssp CSSCCCEEEECTTSCE-EEEEC------------TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEET-
T ss_pred cCCceeEEEEcCCCCE-EEEEc------------CCCeEEEEECCC--cceeEEEcCCCCceEEEEECCCCCEEEEEeC-
Confidence 1223568999999997 55543 235788888751 223334444555667 999999998887652
Q ss_pred cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 319 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
...|.+.++.++ ............++. ++|+|||+.|+..+
T Consensus 269 ---D~~v~iwd~~~~--~~~~~~~~h~~~v~~------v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 269 ---DKSVKVWDVGTR--TCVHTFFDHQDQVWG------VKYNGNGSKIVSVG 309 (321)
T ss_dssp ---TSCEEEEETTTT--EEEEEECCCSSCEEE------EEECTTSSEEEEEE
T ss_pred ---CCcEEEEeCCCC--EEEEEEcCCCCcEEE------EEECCCCCEEEEEe
Confidence 235666676664 222222222223333 88999999988777
No 175
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.68 E-value=3.8e-16 Score=155.73 Aligned_cols=196 Identities=18% Similarity=0.155 Sum_probs=129.3
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC----Cc--hhHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP----ND--RFVEQLVSSA 585 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~----~~--~~~~~~~~d~ 585 (751)
.|+||++||.+.. ...+. .....|++ ||.|++ ++.+|+|.+.. .. ....+..+|+
T Consensus 20 ~p~vv~~HG~~~~-----------~~~~~----~~~~~l~~-g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTD-----------QSAWN----RILPFFLR-DYRVVL---YDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCC-----------GGGGT----TTGGGGTT-TCEEEE---ECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCc-----------HHHHH----HHHHHHhC-CcEEEE---EcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 4899999996421 12222 22334445 999999 56667777643 11 1245566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-c--Cccccc-----------cc
Q 004475 586 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F--GFQTEF-----------RT 651 (751)
Q Consensus 586 ~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~--~~~~~~-----------~~ 651 (751)
.++++.+ +.++++++|||+||.+|+.++.++|++++++|++++........ + .+.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666554 34589999999999999999999999999999999864321110 0 000000 00
Q ss_pred ch-----------------h----------------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHH
Q 004475 652 LW-----------------E----------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 698 (751)
Q Consensus 652 ~~-----------------~----------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~ 698 (751)
.| . ....+........+.++++|+|+++|++|..+| ...++.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 0 000111223344567889999999999999998 888888877
Q ss_pred HHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 699 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 699 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
.+.. .++++++++++|... .+....+.+.+.+||.+
T Consensus 233 ~~~~---~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 233 HLGG---KNTVHWLNIEGHLPH-LSAPTLLAQELRRALSH 268 (269)
T ss_dssp HSSS---CEEEEEEEEESSCHH-HHCHHHHHHHHHHHHC-
T ss_pred hCCC---CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHhh
Confidence 6642 279999999999875 45677888888898865
No 176
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.68 E-value=2.5e-16 Score=166.11 Aligned_cols=222 Identities=12% Similarity=0.122 Sum_probs=135.6
Q ss_pred ccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCC----chHHHHHH
Q 004475 476 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT----PTSSLIFL 551 (751)
Q Consensus 476 ~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 551 (751)
...+..+.+.+.+.+|..+.++++.|++. ++++|+||++||+|.......+ ..+....+...+ ...+..|+
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~~~~~-~~g~~~~~~~~y~~~~~~~a~~la 161 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKEGLAG-EPGIAPKLNDRYKDPKLTQALNFV 161 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHHHHHT-CCCSSSTTCCSTTCTTTCHHHHHH
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcccccc-cccccccccccccchHHHHHHHHH
Confidence 34467888999998999999999999763 3468999999997532110000 000000010111 14677899
Q ss_pred hCCeEEEEcCCCCCCCCCCCCCCc----------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeC
Q 004475 552 ARRFAVLAGPSIPIIGEGDKLPND----------------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHS 609 (751)
Q Consensus 552 ~~G~~v~~~~~~~~~g~g~~~~~~----------------------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S 609 (751)
++||+|+++|+ +|+|.+.... ........|+..+++||.+++.+|++||+|+|||
T Consensus 162 ~~Gy~Vl~~D~---rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S 238 (398)
T 3nuz_A 162 KEGYIAVAVDN---PAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFS 238 (398)
T ss_dssp TTTCEEEEECC---TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEG
T ss_pred HCCCEEEEecC---CCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEC
Confidence 99999999554 4555442111 1223345899999999999988999999999999
Q ss_pred hHHHHHHHHHHhCCCceeEEEEccCCCCCCCC--ccC---------cccccccchhhHHHHHhcCcccccCC-CCCCEEE
Q 004475 610 YGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--PFG---------FQTEFRTLWEATNVYIEMSPITHANK-IKKPILI 677 (751)
Q Consensus 610 ~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li 677 (751)
|||++|+.+++.. ++++++|+.+++...... ... +....... .+......+....+.. ...|+|+
T Consensus 239 ~GG~~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~ap~PlLi 315 (398)
T 3nuz_A 239 LGTEPMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHL--IPDFWKNFNFPDIVAALAPRPIIL 315 (398)
T ss_dssp GGHHHHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGC--CTTHHHHCCHHHHHHHTTTSCEEE
T ss_pred HhHHHHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHHh--cchHhhhCCHHHHHHhhCCCcEEE
Confidence 9999999998887 578888886554321000 000 00000000 0000111111111111 1369999
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC
Q 004475 678 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 713 (751)
Q Consensus 678 ~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~ 713 (751)
+||+.|.. ...++++++.+.. ..++++.+||
T Consensus 316 i~G~~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 316 TEGGLDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp CSCBCHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred eeCCchHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 99999955 4566666665533 3567888777
No 177
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.68 E-value=2.6e-16 Score=157.21 Aligned_cols=200 Identities=14% Similarity=0.146 Sum_probs=131.6
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v 589 (751)
.|+||++||.+.. ...+ ......|+. +||.|++ ++.+|+|.+.... ....+..+|+.+++
T Consensus 21 ~~~vv~lhG~~~~-----------~~~~----~~~~~~l~~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~l 82 (272)
T 3fsg_A 21 GTPIIFLHGLSLD-----------KQST----CLFFEPLSNVGQYQRIY---LDLPGMGNSDPISPSTSDNVLETLIEAI 82 (272)
T ss_dssp SSEEEEECCTTCC-----------HHHH----HHHHTTSTTSTTSEEEE---ECCTTSTTCCCCSSCSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCc-----------HHHH----HHHHHHHhccCceEEEE---ecCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4789999996411 0111 112223444 6999999 5666777765433 34566677777777
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcc-----------c----cc-----
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ-----------T----EF----- 649 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~-----------~----~~----- 649 (751)
+.+. +..+++++|||+||.+|+.++.++|++++++|+++|............ . ..
T Consensus 83 ~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
T 3fsg_A 83 EEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFL 157 (272)
T ss_dssp HHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHH
T ss_pred HHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHH
Confidence 7642 236899999999999999999999999999999998753211100000 0 00
Q ss_pred -------ccchhhH-------------HHHHh---c-----CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHH
Q 004475 650 -------RTLWEAT-------------NVYIE---M-----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 701 (751)
Q Consensus 650 -------~~~~~~~-------------~~~~~---~-----~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~ 701 (751)
...+... ..... . .+...+.++++|+|+++|++|..+| +..++++.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~- 234 (272)
T 3fsg_A 158 SMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVG--YQEQLKLINHN- 234 (272)
T ss_dssp HHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTC--SHHHHHHHTTC-
T ss_pred HHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCC--HHHHHHHHHhc-
Confidence 0000000 00000 0 0011346789999999999999998 78777666544
Q ss_pred hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 702 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 702 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
..++++++++++|.+. .+....+.+.+.+||++...
T Consensus 235 ---~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 235 ---ENGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp ---TTEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHHHC
T ss_pred ---CCCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHhhc
Confidence 3579999999999976 45678889999999988654
No 178
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.67 E-value=2.4e-15 Score=149.84 Aligned_cols=211 Identities=17% Similarity=0.159 Sum_probs=139.0
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.+..+-|.+ .+.|+||++||.+. +...|. .+...|+ .+|.|++ ++.+|+
T Consensus 9 ~~g~~l~y~~~g~~~------~~~~~vvllHG~~~-----------~~~~~~----~~~~~L~-~~~~vi~---~D~~G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH------GNAPWIVLSNSLGT-----------DLSMWA----PQVAALS-KHFRVLR---YDTRGH 63 (266)
T ss_dssp CSSSEEEEEEESCSS------SCCCEEEEECCTTC-----------CGGGGG----GGHHHHH-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcCCcc------CCCCeEEEecCccC-----------CHHHHH----HHHHHHh-cCeEEEE---ecCCCC
Confidence 467788877775432 01478999999541 111121 2344554 5699999 667788
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-cC-
Q 004475 569 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG- 644 (751)
Q Consensus 569 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~~- 644 (751)
|.+... ........+|+.++++.+. .+++.++||||||.+|+.+|.++|++++++|+.++........ +.
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 137 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTLK------IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVP 137 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcC------CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHH
Confidence 877542 2335667777777777652 3589999999999999999999999999999998754321100 00
Q ss_pred ---------ccc---ccccch-----h--hH---------------H-------HHHhcCcccccCCCCCCEEEEEcCCC
Q 004475 645 ---------FQT---EFRTLW-----E--AT---------------N-------VYIEMSPITHANKIKKPILIIHGEVD 683 (751)
Q Consensus 645 ---------~~~---~~~~~~-----~--~~---------------~-------~~~~~~~~~~~~~~~~P~li~~G~~D 683 (751)
... .....| . .+ . .+........+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 217 (266)
T 2xua_A 138 RAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHD 217 (266)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCC
Confidence 000 000000 0 00 0 01112233456778999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 684 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 684 ~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
..+| +..++.+.+.+. ..++++++ ++|... .+..+.+.+.+.+||.+
T Consensus 218 ~~~~--~~~~~~~~~~~~----~~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 218 LAAT--PAQGRELAQAIA----GARYVELD-ASHISN-IERADAFTKTVVDFLTE 264 (266)
T ss_dssp SSSC--HHHHHHHHHHST----TCEEEEES-CCSSHH-HHTHHHHHHHHHHHHTC
T ss_pred CcCC--HHHHHHHHHhCC----CCEEEEec-CCCCch-hcCHHHHHHHHHHHHHh
Confidence 9998 888877776654 34899999 999876 45577888899999863
No 179
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.4e-14 Score=147.89 Aligned_cols=309 Identities=9% Similarity=0.010 Sum_probs=185.8
Q ss_pred ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
..+...+|||||++||... ..+.|.++++.+++.......... .+..++|+|||+.|+..+.+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~d--- 95 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCS----------KDSSASVWYSLNGERLGTLDGHTG----TIWSIDVDCFTKYCVTGSAD--- 95 (369)
T ss_dssp SCEEEEEECTTSCEEEEEE----------SSSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETT---
T ss_pred ceEEEEEEcCCCCEEEEEe----------CCCEEEEEeCCCchhhhhhhhcCC----cEEEEEEcCCCCEEEEEeCC---
Confidence 3688999999999998853 336788889888875544332221 47789999999999877442
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCCceEEeeeeCCCCce
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKY 188 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~~~~~~~~~SpDG~~ 188 (751)
..|.++++ +++. ..+.....+..++|+|||++
T Consensus 96 ----------------------------------------------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 129 (369)
T 3zwl_B 96 ----------------------------------------------YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNY 129 (369)
T ss_dssp ----------------------------------------------TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSE
T ss_pred ----------------------------------------------CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCE
Confidence 47888888 6643 33443377889999999999
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCc--cCCCceeeeecCCCceEEEEEeccC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSV--REGMRSISWRADKPSTLYWVEAQDR 265 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~--~~~~~~~~~spdG~~~i~~~~~~~~ 265 (751)
|++..... ......+.+|++...... .+...... ....+... ...+..++|+|||+. ++...
T Consensus 130 l~~~~~~~--------~~~~g~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~---- 194 (369)
T 3zwl_B 130 FLAILDNV--------MKNPGSINIYEIERDSATHELTKVSEE--PIHKIITHEGLDAATVAGWSTKGKY-IIAGH---- 194 (369)
T ss_dssp EEEEECCB--------TTBCCEEEEEEEEECTTTCCEEEECSS--CSEEEECCTTCCCEEEEEECGGGCE-EEEEE----
T ss_pred EEEecCCc--------cCCCCEEEEEEecCCccceeecccccc--eeeeccCCcCccceeEEEEcCCCCE-EEEEc----
Confidence 98875441 111356888887644221 11110000 00000111 114668999999998 55543
Q ss_pred CCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc
Q 004475 266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 344 (751)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 344 (751)
..+.|+++++.. .......+......+. +.|+||++.|+.... ...|.++++.++ .........
T Consensus 195 --------~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~--~~~~~~~~~ 259 (369)
T 3zwl_B 195 --------KDGKISKYDVSN-NYEYVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTL--QVLKKYETD 259 (369)
T ss_dssp --------TTSEEEEEETTT-TTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTC--CEEEEEECS
T ss_pred --------CCCEEEEEECCC-CcEeEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCC--ceeeeecCC
Confidence 235788888851 1122333444556677 999999999887652 346777888774 222222211
Q ss_pred cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeee
Q 004475 345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 424 (751)
Q Consensus 345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 424 (751)
..... ++|+|+|+.|++...+. ...+.... .......+.+||..+++.......... .+.
T Consensus 260 -~~~~~------~~~~~~~~~l~~~~~~~--~~~~~~~~-----~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~-- 319 (369)
T 3zwl_B 260 -CPLNT------AVITPLKEFIILGGGQE--AKDVTTTS-----ANEGKFEARFYHKIFEEEIGRVQGHFG----PLN-- 319 (369)
T ss_dssp -SCEEE------EEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCSS----CEE--
T ss_pred -CCcee------EEecCCCceEEEeecCC--CceEEEEe-----cCCCcceeEEEecCCCcchhheecccC----cEE--
Confidence 11111 78999999998887431 01111100 112234788999988876555443211 122
Q ss_pred ecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 425 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 425 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
.++|+||++.|+... . -+.+.++++..+
T Consensus 320 -----~~~~s~~~~~l~s~~-~---dg~v~iw~~~~~ 347 (369)
T 3zwl_B 320 -----TVAISPQGTSYASGG-E---DGFIRLHHFEKS 347 (369)
T ss_dssp -----EEEECTTSSEEEEEE-T---TSEEEEEEECHH
T ss_pred -----EEEECCCCCEEEEEc-C---CCeEEEEECccc
Confidence 258999999777553 2 246888887654
No 180
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.67 E-value=7.7e-16 Score=145.36 Aligned_cols=185 Identities=11% Similarity=-0.079 Sum_probs=116.8
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 590 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 590 (751)
.|+||++||.+... .....+.......|+++ ||.|++++. +|++.. ....+ ++
T Consensus 4 ~p~vv~lHG~~~~~-----------~~~~~~~~~~~~~l~~~~g~~vi~~d~---~g~~~~--------~~~~~----~~ 57 (194)
T 2qs9_A 4 PSKAVIVPGNGGGD-----------VTTHGWYGWVKKELEKIPGFQCLAKNM---PDPITA--------RESIW----LP 57 (194)
T ss_dssp CCEEEEECCSSSSC-----------TTTSTTHHHHHHHHTTSTTCCEEECCC---SSTTTC--------CHHHH----HH
T ss_pred CCEEEEECCCCCCC-----------cccchHHHHHHHHHhhccCceEEEeeC---CCCCcc--------cHHHH----HH
Confidence 68999999974210 00111222245566676 999999554 443211 11222 33
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCC
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 670 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (751)
.+.+.-.+ ..+++++||||||.+|+.++.++| ++++|++++......... ...... +........+..
T Consensus 58 ~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~ 125 (194)
T 2qs9_A 58 FMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN---ERASGY------FTRPWQWEKIKA 125 (194)
T ss_dssp HHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH---HHHTST------TSSCCCHHHHHH
T ss_pred HHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh---hHHHhh------hcccccHHHHHh
Confidence 33333222 268999999999999999999998 999999998754211100 000000 000011122333
Q ss_pred CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 671 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 671 ~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
+.+|+|+++|++|..+| +..++.+.+.+ . .++.++++++|.+. .+.. +.+..+++||++.....
T Consensus 126 ~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~-~~~p-~~~~~~~~fl~~~~~~~ 189 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQN-TEFH-ELITVVKSLLKVPALEH 189 (194)
T ss_dssp HCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCS-SCCH-HHHHHHHHHHTCCCCCC
T ss_pred hCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccc-hhCH-HHHHHHHHHHHhhhhhh
Confidence 56799999999999999 99999888887 2 38999999999976 3433 45566779998776543
No 181
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.67 E-value=6.5e-15 Score=154.12 Aligned_cols=251 Identities=16% Similarity=0.146 Sum_probs=153.4
Q ss_pred CceEEEEEEcCC--Cc--eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCC-----CccC-----CCCc
Q 004475 479 LQKEMIKYQRKD--GV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP-----NEFS-----GMTP 544 (751)
Q Consensus 479 ~~~e~i~~~~~~--~~--~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~-----~~~~-----~~~~ 544 (751)
....+|.|.+.+ |. .+.+.++.|.+.. .+.|+|.|.||.-... .++..+. .... .+..
T Consensus 73 ~~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~----~~CaPS~~~~~~~~~~~~~~~~~e~ 144 (462)
T 3guu_A 73 AASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATA----LDCAPSYSYLTGLDQPNKVTAVLDT 144 (462)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCS----GGGCHHHHHBSCSCCTTGGGGSTHH
T ss_pred ceEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCC----CCcCCccccccCCCccccchhhhhH
Confidence 466777777754 33 4889999998732 2379999999963111 1111000 0000 1111
Q ss_pred hHHHHH-HhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCC-CCcEEEEEeChHHHHHHHHHHhC
Q 004475 545 TSSLIF-LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD-PSRIAVGGHSYGAFMTAHLLAHA 622 (751)
Q Consensus 545 ~~~~~~-~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id-~~~i~l~G~S~GG~~a~~~a~~~ 622 (751)
.....+ +++||+|++ .|+.|.|............+.|..+++..+. .++ ..+++++|||+||..+++++...
T Consensus 145 ~~~~~~~l~~G~~Vv~---~Dy~G~G~~y~~~~~~~~~vlD~vrAa~~~~---~~~~~~~v~l~G~S~GG~aal~aa~~~ 218 (462)
T 3guu_A 145 PIIIGWALQQGYYVVS---SDHEGFKAAFIAGYEEGMAILDGIRALKNYQ---NLPSDSKVALEGYSGGAHATVWATSLA 218 (462)
T ss_dssp HHHHHHHHHTTCEEEE---ECTTTTTTCTTCHHHHHHHHHHHHHHHHHHT---TCCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEE---ecCCCCCCcccCCcchhHHHHHHHHHHHHhc---cCCCCCCEEEEeeCccHHHHHHHHHhC
Confidence 234466 899999999 5556666543322222122333333333332 232 47999999999999999888754
Q ss_pred ----CC-ceeEEEEccCCCCCCCC-------cc---------C----cc----------c------------c-------
Q 004475 623 ----PH-LFCCGIARSGSYNKTLT-------PF---------G----FQ----------T------------E------- 648 (751)
Q Consensus 623 ----p~-~~~~~v~~~~~~d~~~~-------~~---------~----~~----------~------------~------- 648 (751)
|+ .++++++.++..|.... .+ + ++ . .
T Consensus 219 ~~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~ 298 (462)
T 3guu_A 219 ESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQV 298 (462)
T ss_dssp HHHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHH
T ss_pred hhhcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHH
Confidence 33 58888888877551100 00 0 00 0 0
Q ss_pred -------c-------ccchhhH---HHHHhcCccc-----ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCc
Q 004475 649 -------F-------RTLWEAT---NVYIEMSPIT-----HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 706 (751)
Q Consensus 649 -------~-------~~~~~~~---~~~~~~~~~~-----~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~ 706 (751)
. ..+...+ +.+.+..... -..+.++|+||+||++|.+|| +.+++++++++++.|.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G~~ 376 (462)
T 3guu_A 299 VLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKGAN 376 (462)
T ss_dssp HHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCE
T ss_pred HHhhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcCCC
Confidence 0 0000000 1111111100 123567999999999999999 99999999999999999
Q ss_pred EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCCCCCCC-CC
Q 004475 707 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGK-CG 750 (751)
Q Consensus 707 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~-~~ 750 (751)
+++++|++.+|..... .....+++||++++... ...+ |+
T Consensus 377 V~~~~y~~~~H~~~~~----~~~~d~l~WL~~r~~G~-~~~~~C~ 416 (462)
T 3guu_A 377 INFSPYPIAEHLTAEI----FGLVPSLWFIKQAFDGT-TPKVICG 416 (462)
T ss_dssp EEEEEESSCCHHHHHH----HTHHHHHHHHHHHHHTC-CCCCCTT
T ss_pred eEEEEECcCCccCchh----hhHHHHHHHHHHHhCCC-CCCCCCC
Confidence 9999999999986432 33678899999999766 5555 86
No 182
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.66 E-value=2e-15 Score=167.96 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=147.8
Q ss_pred ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475 480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 559 (751)
Q Consensus 480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 559 (751)
..+...+...+|..+.....- ..|+||++||.+. ....| ......|+++||.|++
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPE-----------SWYSW----RYQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTC-----------CGGGG----TTHHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCC-----------chhHH----HHHHHHHHhCCCEEEE
Confidence 344555555578878766552 1489999999752 11122 2456678889999999
Q ss_pred cCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 560 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
.+.+|+|.+.... ....+..+|+.++++.+ +.++++++||||||.+|+.++.++|++++++|++++.
T Consensus 291 ---~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 291 ---MDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ---ECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ---ecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 5666777765432 22456667777777666 3458999999999999999999999999999998875
Q ss_pred CCCCCCccCccc---------------------------------------c------------------------cccc
Q 004475 636 YNKTLTPFGFQT---------------------------------------E------------------------FRTL 652 (751)
Q Consensus 636 ~d~~~~~~~~~~---------------------------------------~------------------------~~~~ 652 (751)
............ . ....
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (555)
T 3i28_A 362 FIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 441 (555)
T ss_dssp CCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTT
T ss_pred CCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccc
Confidence 432111000000 0 0000
Q ss_pred h--hhHHHH----------------------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 004475 653 W--EATNVY----------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 708 (751)
Q Consensus 653 ~--~~~~~~----------------------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~ 708 (751)
. .....+ ........+.++++|+|+++|++|..+| ...++.+.+.+ ..++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~----~~~~ 515 (555)
T 3i28_A 442 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWI----PHLK 515 (555)
T ss_dssp CCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTC----TTCE
T ss_pred cCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhC----CCce
Confidence 0 000000 0001122345789999999999999998 78777666554 3468
Q ss_pred EEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCCC
Q 004475 709 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 744 (751)
Q Consensus 709 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 744 (751)
++++++++|... .+....+.+.+.+||++.....+
T Consensus 516 ~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 550 (555)
T 3i28_A 516 RGHIEDCGHWTQ-MDKPTEVNQILIKWLDSDARNPP 550 (555)
T ss_dssp EEEETTCCSCHH-HHSHHHHHHHHHHHHHHHTCC--
T ss_pred EEEeCCCCCCcc-hhCHHHHHHHHHHHHHhccCCCC
Confidence 999999999865 46678899999999999876543
No 183
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.66 E-value=9.9e-14 Score=155.89 Aligned_cols=311 Identities=9% Similarity=0.077 Sum_probs=183.6
Q ss_pred eeEEeecCCCCCCCCccc-ccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 6 GIGIHRLLPDDSLGPEKE-VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
.|++|++.+ ++... +++ ....+...+|||||++||-.+ ....|.++++.+++...+.....+
T Consensus 40 ~v~l~~~~~----~~~~~~~~~--h~~~v~~~~~spdg~~lasg~----------~d~~v~lWd~~~~~~~~~~~~~~~- 102 (611)
T 1nr0_A 40 SVYTVPVGS----LTDTEIYTE--HSHQTTVAKTSPSGYYCASGD----------VHGNVRIWDTTQTTHILKTTIPVF- 102 (611)
T ss_dssp EEEEEETTC----SSCCEEECC--CSSCEEEEEECTTSSEEEEEE----------TTSEEEEEESSSTTCCEEEEEECS-
T ss_pred EEEEecCCC----cccCeEecC--CCCceEEEEECCCCcEEEEEe----------CCCCEEEeECCCCcceeeEeeccc-
Confidence 688999976 55443 332 223588899999999999863 336777888866543222111111
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
...+..++|||||+.|+........ ...+++++.
T Consensus 103 -~~~v~~v~fs~dg~~l~~~~~~~~~---------------------------------------------~~~v~~wd~ 136 (611)
T 1nr0_A 103 -SGPVKDISWDSESKRIAAVGEGRER---------------------------------------------FGHVFLFDT 136 (611)
T ss_dssp -SSCEEEEEECTTSCEEEEEECCSSC---------------------------------------------SEEEEETTT
T ss_pred -CCceEEEEECCCCCEEEEEECCCCc---------------------------------------------eeEEEEeeC
Confidence 1147889999999999877542111 146788885
Q ss_pred CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475 165 DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (751)
Q Consensus 165 ~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (751)
......+..+ ..+..++|+||++.++++... ...+.+||..+.+.... +......
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~------------D~~v~lwd~~~~~~~~~------------l~~H~~~ 192 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSD------------DNTVAIFEGPPFKFKST------------FGEHTKF 192 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEET------------TSCEEEEETTTBEEEEE------------ECCCSSC
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeC------------CCeEEEEECCCCeEeee------------eccccCc
Confidence 3334445555 778899999999864444332 23588999876543321 1112234
Q ss_pred CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-------eeceeEE-EEEecCCceEEEe
Q 004475 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-------KLDLRFS-VSWCDDSLALVNE 315 (751)
Q Consensus 244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-------~~~~~~~-~~~spdg~~l~~~ 315 (751)
+..++|+|||+. |+..+ ..+.|.++++.. +.....+. .....+. ++|+|||+.|+..
T Consensus 193 V~~v~fspdg~~-las~s------------~D~~i~lwd~~~--g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 193 VHSVRYNPDGSL-FASTG------------GDGTIVLYNGVD--GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp EEEEEECTTSSE-EEEEE------------TTSCEEEEETTT--CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEECCCCCE-EEEEE------------CCCcEEEEECCC--CcEeeeeccccccccccCCCEEEEEECCCCCEEEEE
Confidence 668999999997 55543 235678887641 22222221 2445666 9999999998876
Q ss_pred eeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCce
Q 004475 316 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPF 395 (751)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (751)
+. ...|.+.++.++ .....+........ .......+++.|+..+.+ ..
T Consensus 258 s~----D~~v~lWd~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~l~s~s~d---------------------~~ 305 (611)
T 1nr0_A 258 SA----DKTIKIWNVATL-KVEKTIPVGTRIED------QQLGIIWTKQALVSISAN---------------------GF 305 (611)
T ss_dssp ET----TSEEEEEETTTT-EEEEEEECCSSGGG------CEEEEEECSSCEEEEETT---------------------CC
T ss_pred eC----CCeEEEEeCCCC-ceeeeecCCCCccc------eeEEEEEcCCEEEEEeCC---------------------Cc
Confidence 52 235666666664 11112211100000 001122267777666622 26
Q ss_pred eEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 396 LDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 396 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
+.+|+..+++.......... .+. .++|||||+.|+-.. . -..+.++|+.+++..+
T Consensus 306 i~~~~~~~~~~~~~~~gh~~----~v~-------~l~~spdg~~l~s~s-~---D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 306 INFVNPELGSIDQVRYGHNK----AIT-------ALSSSADGKTLFSAD-A---EGHINSWDISTGISNR 360 (611)
T ss_dssp EEEEETTTTEEEEEECCCSS----CEE-------EEEECTTSSEEEEEE-T---TSCEEEEETTTCCEEE
T ss_pred EEEEeCCCCCcceEEcCCCC----CEE-------EEEEeCCCCEEEEEe-C---CCcEEEEECCCCceee
Confidence 78889887765443322111 122 258999999877543 2 2458899998876554
No 184
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.66 E-value=1.9e-15 Score=151.65 Aligned_cols=235 Identities=13% Similarity=0.089 Sum_probs=146.1
Q ss_pred ceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475 480 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 558 (751)
Q Consensus 480 ~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 558 (751)
..+.+++.+. .+..+..+ +|+.+ + |+||++||.+.. .....|.... .....++++||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEEE
Confidence 4566666654 34455555 44442 1 489999997410 0111111100 12234667899999
Q ss_pred EcCCCCCCCCCC--CC-------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 004475 559 AGPSIPIIGEGD--KL-------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 629 (751)
Q Consensus 559 ~~~~~~~~g~g~--~~-------~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 629 (751)
+++..+..++.. .. ....+...+.+++. .++.++..+++++++|+||||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~---~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMP---AWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHH---HHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHH---HHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 976543222221 10 01222222334444 4444433466779999999999999999999999999999
Q ss_pred EEccCCCCCCCCccC-cc-----cc----cccchh--hHHHHHhcCcccccCCC---CCCEEEEEcCCCC----------
Q 004475 630 IARSGSYNKTLTPFG-FQ-----TE----FRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD---------- 684 (751)
Q Consensus 630 v~~~~~~d~~~~~~~-~~-----~~----~~~~~~--~~~~~~~~~~~~~~~~~---~~P~li~~G~~D~---------- 684 (751)
++++|.++....... .. .. ....|. ....+...+|..++.++ .+|+++.||+.|.
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 999998764321000 00 00 000011 11245555666555444 5899999999997
Q ss_pred ----CCCCChHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 685 ----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 685 ----~vp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.++ ...+++++++|+++| .++++.++++++|.+. .+...+...+.||.+.|+
T Consensus 223 ~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 223 KFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHhC
Confidence 456 889999999999999 9999999998899853 355667778888887764
No 185
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.66 E-value=4.1e-16 Score=163.95 Aligned_cols=226 Identities=13% Similarity=0.011 Sum_probs=145.1
Q ss_pred CceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE-
Q 004475 479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA- 556 (751)
Q Consensus 479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~- 556 (751)
-..+.+++.+. .+..+.+++|+|+++. .+++|+|+++||++|... .........|+++|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~~~--------------~~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQS--------------MPVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHHT--------------SCCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHhhc--------------CcHHHHHHHHHHcCCCC
Confidence 35677887764 5568999999998753 235999999999653210 0112345677888874
Q ss_pred ---EEEcCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 004475 557 ---VLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 630 (751)
Q Consensus 557 ---v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~~v~~l~~~~--~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 630 (751)
|+++++.+..+...... ...+...+. .+++.++.++. ..|+++++|+|+||||++|+.++.++|+.|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~---~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQ---QELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHH---HTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHH---HHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 77765532111110111 112222222 35566676653 3578899999999999999999999999999999
Q ss_pred EccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475 631 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 710 (751)
Q Consensus 631 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~ 710 (751)
+++|.+...... .. . ..+ ..+.+... ......+|++++||+.|..+ ..++++++++|+++|.++++.
T Consensus 306 ~~sg~~~~~~~~--~~-~--~~~-~~~~~~~~----~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~~~ 372 (403)
T 3c8d_A 306 SQSGSYWWPHRG--GQ-Q--EGV-LLEKLKAG----EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWR 372 (403)
T ss_dssp EESCCTTTTCTT--SS-S--CCH-HHHHHHTT----SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEEEE
T ss_pred EeccccccCCCC--CC-c--HHH-HHHHHHhc----cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEEEE
Confidence 999986532110 00 0 001 01111111 12345689999999998654 688999999999999999999
Q ss_pred EeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 711 LLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 711 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
++++ +|.+. .+...+..++.||.+...
T Consensus 373 ~~~G-gH~~~---~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 373 QVDG-GHDAL---CWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp EESC-CSCHH---HHHHHHHHHHHHHHGGGT
T ss_pred EeCC-CCCHH---HHHHHHHHHHHHHhcccc
Confidence 9999 59853 244566777888876543
No 186
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.66 E-value=2e-15 Score=152.26 Aligned_cols=214 Identities=16% Similarity=0.113 Sum_probs=134.2
Q ss_pred cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475 488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 567 (751)
Q Consensus 488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g 567 (751)
..+|..+.....-+.+ .|+||++||.+.+. .....|. .....|++ +|.|++ ++.+|
T Consensus 13 ~~~g~~l~y~~~g~~g--------~p~vvllHG~~~~~-----------~~~~~~~-~~~~~L~~-~~~vi~---~D~~G 68 (285)
T 1c4x_A 13 PSGTLASHALVAGDPQ--------SPAVVLLHGAGPGA-----------HAASNWR-PIIPDLAE-NFFVVA---PDLIG 68 (285)
T ss_dssp CCTTSCEEEEEESCTT--------SCEEEEECCCSTTC-----------CHHHHHG-GGHHHHHT-TSEEEE---ECCTT
T ss_pred EECCEEEEEEecCCCC--------CCEEEEEeCCCCCC-----------cchhhHH-HHHHHHhh-CcEEEE---ecCCC
Confidence 3466677665543211 37799999963110 0111111 22344444 599999 66678
Q ss_pred CCCCCCCc---hhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC
Q 004475 568 EGDKLPND---RFVEQL----VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 640 (751)
Q Consensus 568 ~g~~~~~~---~~~~~~----~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~ 640 (751)
+|.+.... ...... .+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|++++++|+.++......
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~ 142 (285)
T 1c4x_A 69 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHF------GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN 142 (285)
T ss_dssp STTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCS
T ss_pred CCCCCCCCCcccchhhhhhhHHHHHHHHHHHh------CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCC
Confidence 87764432 234555 66666666554 236899999999999999999999999999999987542110
Q ss_pred C--c-----cCc---c-------------cccccc----------h---hhHHHHH---h-----c-------CcccccC
Q 004475 641 T--P-----FGF---Q-------------TEFRTL----------W---EATNVYI---E-----M-------SPITHAN 669 (751)
Q Consensus 641 ~--~-----~~~---~-------------~~~~~~----------~---~~~~~~~---~-----~-------~~~~~~~ 669 (751)
. . ... . ...... + ..+..+. . . .....+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (285)
T 1c4x_A 143 ARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLG 222 (285)
T ss_dssp SCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHT
T ss_pred ccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhc
Confidence 0 0 000 0 000000 0 0000000 0 0 0123457
Q ss_pred CCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 670 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 670 ~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
++++|+|+++|++|..+| +..++.+.+.+. ..+++++++++|... .+....+.+.+.+||.+
T Consensus 223 ~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 223 RLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp TCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEeCCCeeeC--HHHHHHHHHhCC----CceEEEeCCCCcchh-hcCHHHHHHHHHHHHhc
Confidence 889999999999999998 888777766553 568999999999875 45677888999999863
No 187
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.66 E-value=3.6e-16 Score=156.86 Aligned_cols=203 Identities=11% Similarity=0.042 Sum_probs=127.4
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-h----hHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-R----FVEQLVSSAE 586 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-~----~~~~~~~d~~ 586 (751)
.|+||++||.+. ....+ ......++++||.|++ ++.+|+|.+.... . ...+..+|+.
T Consensus 24 ~~~vv~lHG~~~-----------~~~~~----~~~~~~l~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (279)
T 4g9e_A 24 GAPLLMIHGNSS-----------SGAIF----APQLEGEIGKKWRVIA---PDLPGHGKSTDAIDPDRSYSMEGYADAMT 85 (279)
T ss_dssp EEEEEEECCTTC-----------CGGGG----HHHHHSHHHHHEEEEE---ECCTTSTTSCCCSCHHHHSSHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------chhHH----HHHHhHHHhcCCeEEe---ecCCCCCCCCCCCCcccCCCHHHHHHHHH
Confidence 589999999741 11111 2334455778999999 6667888775432 1 2344555555
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-------cCcccc--cc-------
Q 004475 587 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-------FGFQTE--FR------- 650 (751)
Q Consensus 587 ~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-------~~~~~~--~~------- 650 (751)
++++.+ +..+++++|||+||.+|+.++.++|+ +.++|++++........ ...... ..
T Consensus 86 ~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
T 4g9e_A 86 EVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVE 158 (279)
T ss_dssp HHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHH
T ss_pred HHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHH
Confidence 555554 23589999999999999999999998 66666666543211000 000000 00
Q ss_pred --------cch--hhHHHH---------------H---hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH-HHHH
Q 004475 651 --------TLW--EATNVY---------------I---EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF-DALK 701 (751)
Q Consensus 651 --------~~~--~~~~~~---------------~---~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~-~~l~ 701 (751)
... ...+.+ . .......+.++++|+|+++|++|..+| ...+..+. +.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~- 235 (279)
T 4g9e_A 159 SYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVE--LDFVSKVKFGNL- 235 (279)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBC--HHHHTTCCCSSB-
T ss_pred HHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccc--hHHHHHHhhccC-
Confidence 000 000000 0 011122345678999999999999998 77665554 222
Q ss_pred hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCCCCC
Q 004475 702 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSD 746 (751)
Q Consensus 702 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 746 (751)
..++++++++++|... .+....+.+.+.+||.+.......+
T Consensus 236 ---~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~~~~~ 276 (279)
T 4g9e_A 236 ---WEGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQLEHHH 276 (279)
T ss_dssp ---GGGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSSCCCC
T ss_pred ---CCCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhhhhhh
Confidence 2457899999999865 5677889999999999987654443
No 188
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.66 E-value=1.5e-15 Score=152.65 Aligned_cols=194 Identities=16% Similarity=0.127 Sum_probs=127.4
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVE 590 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~ 590 (751)
|.||++||.+. +...| ......|+++||.|++ ++.+|+|.+... ........+|+.++++
T Consensus 24 ~pvvllHG~~~-----------~~~~~----~~~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 24 QPVVLIHGYPL-----------DGHSW----ERQTRELLAQGYRVIT---YDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp EEEEEECCTTC-----------CGGGG----HHHHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCc-----------hhhHH----hhhHHHHHhCCcEEEE---eCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 45999999641 11111 2345677889999999 666788777543 2245667788888887
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCC----ccCccccc-----------c-c--
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT----PFGFQTEF-----------R-T-- 651 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~d~~~~----~~~~~~~~-----------~-~-- 651 (751)
.+ +.+++.++||||||.+|+.+|.++|+ +++++|+.++....... ........ . .
T Consensus 86 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T 1hkh_A 86 TL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred hc------CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhH
Confidence 76 23589999999999999999999998 99999999874321100 00000000 0 0
Q ss_pred ------chh---------hH---HHHH------------------hcCcccccCCC---CCCEEEEEcCCCCCCCCChHH
Q 004475 652 ------LWE---------AT---NVYI------------------EMSPITHANKI---KKPILIIHGEVDDKVGLFPMQ 692 (751)
Q Consensus 652 ------~~~---------~~---~~~~------------------~~~~~~~~~~~---~~P~li~~G~~D~~vp~~~~~ 692 (751)
.+. .. +.+. .......+.++ ++|+|+++|++|..+| +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~--~~~ 237 (279)
T 1hkh_A 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--IDA 237 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TTT
T ss_pred HHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCC--hHH
Confidence 000 00 0000 00111234456 8999999999999998 666
Q ss_pred H-HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 693 A-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 693 ~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+ +.+.+.+. .++++++++++|... .+..+.+.+.+.+||.
T Consensus 238 ~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 238 TARRFHQAVP----EADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp THHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC----CeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 5 56655543 468999999999875 4567788889999985
No 189
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.66 E-value=3.2e-15 Score=150.74 Aligned_cols=197 Identities=12% Similarity=0.059 Sum_probs=127.5
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHH-HHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 588 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 588 (751)
|.||++||.++++. ....|. ... ..|++ .|.|++ ++.+|+|.+.... ....+..+|+.+.
T Consensus 34 ~~vvllHG~~~~~~-----------~~~~w~-~~~~~~L~~-~~~vi~---~D~~G~G~S~~~~~~~~~~~~~a~dl~~~ 97 (286)
T 2puj_A 34 ETVIMLHGGGPGAG-----------GWSNYY-RNVGPFVDA-GYRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKGL 97 (286)
T ss_dssp SEEEEECCCSTTCC-----------HHHHHT-TTHHHHHHT-TCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCC-----------cHHHHH-HHHHHHHhc-cCEEEE---ECCCCCCCCCCCCCcCcCHHHHHHHHHHH
Confidence 68999999632110 011111 223 44554 499999 6677888775432 2345556666666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC--C--cc-Cc---------cc-------
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--T--PF-GF---------QT------- 647 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~--~--~~-~~---------~~------- 647 (751)
++.+ +.+++.|+||||||.+|+.+|.++|++++++|+.++...... . .. .. ..
T Consensus 98 l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (286)
T 2puj_A 98 MDAL------DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQM 171 (286)
T ss_dssp HHHT------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHh------CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHH
Confidence 5544 246899999999999999999999999999999987542110 0 00 00 00
Q ss_pred ------ccc--------cchh----hHH---HHH---------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH
Q 004475 648 ------EFR--------TLWE----ATN---VYI---------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 697 (751)
Q Consensus 648 ------~~~--------~~~~----~~~---~~~---------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~ 697 (751)
... ..+. .+. .+. .......+.++++|+|+++|++|..+| +..++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~ 249 (286)
T 2puj_A 172 LQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLL 249 (286)
T ss_dssp HHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred HHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHHH
Confidence 000 0000 000 000 011223567789999999999999998 88887776
Q ss_pred HHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 698 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+.++ ..+++++++++|... .+....+.+.+.+||.+
T Consensus 250 ~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 250 WNID----DARLHVFSKCGAWAQ-WEHADEFNRLVIDFLRH 285 (286)
T ss_dssp HHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred HHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 6553 468999999999875 55677888999999964
No 190
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.66 E-value=1.8e-15 Score=155.90 Aligned_cols=216 Identities=16% Similarity=0.145 Sum_probs=137.5
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 567 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g 567 (751)
.+|.++.+..+-|++. ..+.+.||++||++. ....| . .....|+. .||.|++ +|.+|
T Consensus 35 ~~g~~l~y~~~G~~~~----~~~g~plvllHG~~~-----------~~~~w---~-~~~~~l~~~~~~~Via---~D~rG 92 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA----QPHALPLIVLHGGPG-----------MAHNY---V-ANIAALADETGRTVIH---YDQVG 92 (330)
T ss_dssp ETTEEEEEEEECCSSC----CTTCCCEEEECCTTT-----------CCSGG---G-GGGGGHHHHHTCCEEE---ECCTT
T ss_pred ecCcEEEEEEecCccC----CCCCCcEEEECCCCC-----------CchhH---H-HHHHHhccccCcEEEE---ECCCC
Confidence 4677888888876421 101235888999641 11111 1 12334554 6999999 67778
Q ss_pred CCCCCC--Cc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-
Q 004475 568 EGDKLP--ND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 640 (751)
Q Consensus 568 ~g~~~~--~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~- 640 (751)
+|.+.. .. .......+|+.++++.+ +.+++.|+||||||.+|+.+|.++|+++.++|+.++......
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 166 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW 166 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH
Confidence 887743 11 12456677777777766 235899999999999999999999999999998876432100
Q ss_pred ----------Ccc------------C-ccc-c--------------cccchhh------------HHHHH----------
Q 004475 641 ----------TPF------------G-FQT-E--------------FRTLWEA------------TNVYI---------- 660 (751)
Q Consensus 641 ----------~~~------------~-~~~-~--------------~~~~~~~------------~~~~~---------- 660 (751)
.+. . ... . ....+.. +..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 3nwo_A 167 SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246 (330)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhh
Confidence 000 0 000 0 0000000 00000
Q ss_pred -----hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHH
Q 004475 661 -----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 735 (751)
Q Consensus 661 -----~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 735 (751)
.......+.++++|+|+++|++|.++| ..+..+.+.+ ...+++++|++||... .+..+.+.+.+.+|
T Consensus 247 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~i----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHI----PDVRSHVFPGTSHCTH-LEKPEEFRAVVAQF 318 (330)
T ss_dssp CSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHC----SSEEEEEETTCCTTHH-HHSHHHHHHHHHHH
T ss_pred hccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhC----CCCcEEEeCCCCCchh-hcCHHHHHHHHHHH
Confidence 011223456789999999999999875 4555555443 3579999999999876 56778899999999
Q ss_pred HHHHh
Q 004475 736 LQKYC 740 (751)
Q Consensus 736 l~~~l 740 (751)
|.++-
T Consensus 319 L~~~~ 323 (330)
T 3nwo_A 319 LHQHD 323 (330)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98764
No 191
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.66 E-value=8.2e-14 Score=153.05 Aligned_cols=327 Identities=9% Similarity=-0.003 Sum_probs=188.9
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEc--CCCCeeeccCCCCc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDI 83 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~--~~g~~~~lt~~~~~ 83 (751)
.|.++|+.+ |+..... +.+......+|||||++|+..+ . ...|.++|+ ++++...-.....
T Consensus 160 ~V~v~D~~t----~~~~~~i--~~g~~~~~v~~spdg~~l~v~~---------~-d~~V~v~D~~~~t~~~~~~i~~g~- 222 (543)
T 1nir_A 160 QIALVDGDS----KKIVKVI--DTGYAVHISRMSASGRYLLVIG---------R-DARIDMIDLWAKEPTKVAEIKIGI- 222 (543)
T ss_dssp EEEEEETTT----CCEEEEE--ECSTTEEEEEECTTSCEEEEEE---------T-TSEEEEEETTSSSCEEEEEEECCS-
T ss_pred eEEEEECCC----ceEEEEE--ecCcccceEEECCCCCEEEEEC---------C-CCeEEEEECcCCCCcEEEEEecCC-
Confidence 588999988 8776543 2233366788999999987754 2 278999999 6665432222221
Q ss_pred cccceeeeeEEec----CCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 84 CLNAVFGSFVWVN----NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 84 ~~~~~~~~~~wsp----Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
....++||| ||++|+..... ...|
T Consensus 223 ----~p~~va~sp~~~~dg~~l~v~~~~------------------------------------------------~~~v 250 (543)
T 1nir_A 223 ----EARSVESSKFKGYEDRYTIAGAYW------------------------------------------------PPQF 250 (543)
T ss_dssp ----EEEEEEECCSTTCTTTEEEEEEEE------------------------------------------------SSEE
T ss_pred ----CcceEEeCCCcCCCCCEEEEEEcc------------------------------------------------CCeE
Confidence 357889999 99999887431 1466
Q ss_pred EEEcC-CCCce-ecCC-----------C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeec
Q 004475 160 VLGSL-DGTAK-DFGT-----------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC 225 (751)
Q Consensus 160 ~~~~~-~G~~~-~lt~-----------~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 225 (751)
.++|. +++.. .+.. + ..+..+.+|||+++++++... ...|++||..+.+...+.
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~~ 318 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTVT 318 (543)
T ss_dssp EEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEEE
T ss_pred EEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCcceeE
Confidence 77777 55432 2211 1 245688999999988876533 457899998764322211
Q ss_pred cCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc-eEeEeece-eE-E
Q 004475 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDL-RF-S 302 (751)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~~-~~-~ 302 (751)
..+. ...++.+.|+|||++ ++.+.. ..+.|.++|++ .+.. ..+..... .. .
T Consensus 319 ~i~~-----------~~~~~~~~~spdg~~-l~va~~-----------~~~~v~v~D~~---tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 319 SIGA-----------APFLHDGGWDSSHRY-FMTAAN-----------NSNKVAVIDSK---DRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp EEEC-----------CSSCCCEEECTTSCE-EEEEEG-----------GGTEEEEEETT---TTEEEEEEECSSSBCCTT
T ss_pred Eecc-----------CcCccCceECCCCCE-EEEEec-----------CCCeEEEEECC---CCeEEEeeccCCCCCCCC
Confidence 1110 123557899999998 544431 23578888875 3322 22221111 11 1
Q ss_pred -EE-EecCCceEEEeeeecccceeEEEecCCCCC-----CcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCC
Q 004475 303 -VS-WCDDSLALVNETWYKTSQTRTWLVCPGSKD-----VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 375 (751)
Q Consensus 303 -~~-~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 375 (751)
.. ++|++..++.+.... ...|-+++.++.. .+..+......... ..++++|||++|+.....
T Consensus 373 g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~------~~v~~~pdg~~l~v~~~~--- 441 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHLG--DGSISLIGTDPKNHPQYAWKKVAELQGQGGGS------LFIKTHPKSSHLYVDTTF--- 441 (543)
T ss_dssp CEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSCSCC------CCEECCTTCCEEEECCTT---
T ss_pred CcccCCCCCccEEEeccCC--CceEEEEEeCCCCCchhcCeEEEEEEcCCCCc------eEEEcCCCCCcEEEecCC---
Confidence 23 378877665544222 2345556655420 11112222211111 128899999999876510
Q ss_pred cceEEEEccCCCCCC-CCCceeEEEecCCCcee-EEeeccc-hhhhhceeeeecCCcceeeccCCCEEEEEEecC-CCCC
Q 004475 376 EQIYILLNGRGFTPE-GNIPFLDLFDINTGSKE-RIWESNR-EKYFETAVALVFGQGEEDINLNQLKILTSKESK-TEIT 451 (751)
Q Consensus 376 ~~~~~~~~~~~~~~~-~~~~~l~~~d~~~g~~~-~l~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~~ 451 (751)
+++ .....|.+||+++++.. ++..... ...-+.... ...+.|+|||++|+++.++. ....
T Consensus 442 ------------~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~g~~~~~s~~~~~~~~~ 505 (543)
T 1nir_A 442 ------------NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR----VVQPEYNKRGDEVWFSVWNGKNDSS 505 (543)
T ss_dssp ------------CSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE----EEEEEECSSSSEEEEEEECCTTSCC
T ss_pred ------------CCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc----eEeccCCCCCCEEEEEeecCCCCCC
Confidence 000 01337999999988764 4432110 000000001 11258999999999987654 3467
Q ss_pred eEEEEEcCCCceeEe
Q 004475 452 QYHILSWPLKKSSQI 466 (751)
Q Consensus 452 ~l~~~~~~~g~~~~l 466 (751)
.|.++|..+++....
T Consensus 506 ~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 506 ALVVVDDKTLKLKAV 520 (543)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred eEEEEECCCceEEEe
Confidence 899999999886643
No 192
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.66 E-value=5.9e-14 Score=144.92 Aligned_cols=246 Identities=10% Similarity=0.014 Sum_probs=160.7
Q ss_pred ceeEEeecCCCCCCCCcc----cccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCC
Q 004475 5 TGIGIHRLLPDDSLGPEK----EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~----~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~ 80 (751)
..|.+|++.+ ++.. .+........+...+|+|||++|+... ....|.++++.+++...+...
T Consensus 72 g~i~iw~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~ 137 (337)
T 1gxr_A 72 GCVKVWDISH----PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----------EASTLSIWDLAAPTPRIKAEL 137 (337)
T ss_dssp SEEEEEETTS----TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE----------SSSEEEEEECCCC--EEEEEE
T ss_pred CeEEEEECCC----CCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc----------CCCcEEEEECCCCCcceeeec
Confidence 4689999987 4322 221112334688999999999998863 336788889888763332211
Q ss_pred CCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 81 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
..+ ...+..++|+|||+.|+....+ ..|.
T Consensus 138 ~~~--~~~i~~~~~~~~~~~l~~~~~d-------------------------------------------------g~v~ 166 (337)
T 1gxr_A 138 TSS--APACYALAISPDSKVCFSCCSD-------------------------------------------------GNIA 166 (337)
T ss_dssp ECS--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEE
T ss_pred ccC--CCceEEEEECCCCCEEEEEeCC-------------------------------------------------CcEE
Confidence 111 1136788999999998877432 4677
Q ss_pred EEcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCcc
Q 004475 161 LGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (751)
Q Consensus 161 ~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (751)
++++ +++ ...+..+ ..+..++|+|||++|+....+ ..+++||+.+++........
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~--------- 224 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT--------- 224 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS---------
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCC---------
Confidence 8888 553 3445444 778899999999998876533 36889999877654332221
Q ss_pred CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEee
Q 004475 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNET 316 (751)
Q Consensus 238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~ 316 (751)
..+..+.|+|||+. ++... ..+.|+++++. ......+......+. +.|+|||+.|+...
T Consensus 225 ----~~v~~~~~s~~~~~-l~~~~------------~~~~i~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 225 ----SQIFSLGYCPTGEW-LAVGM------------ESSNVEVLHVN---KPDKYQLHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp ----SCEEEEEECTTSSE-EEEEE------------TTSCEEEEETT---SSCEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ----CceEEEEECCCCCE-EEEEc------------CCCcEEEEECC---CCCeEEEcCCccceeEEEECCCCCEEEEec
Confidence 23558899999998 55543 23578888885 344445555566677 99999999887765
Q ss_pred eecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 317 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
. ...|.+.++.++ ........ ...+.. ++|+|||+.|+...
T Consensus 285 ~----dg~i~~~~~~~~--~~~~~~~~-~~~v~~------~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 285 K----DNLLNAWRTPYG--ASIFQSKE-SSSVLS------CDISVDDKYIVTGS 325 (337)
T ss_dssp T----TSEEEEEETTTC--CEEEEEEC-SSCEEE------EEECTTSCEEEEEE
T ss_pred C----CCcEEEEECCCC--eEEEEecC-CCcEEE------EEECCCCCEEEEec
Confidence 2 246777777764 22222211 112222 78999999988877
No 193
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.65 E-value=7.6e-14 Score=149.22 Aligned_cols=254 Identities=10% Similarity=0.123 Sum_probs=149.4
Q ss_pred ccccceeecCCCC-eEEEEEeecccccccCCceeEEEEEc----CCCC-------eeeccCCCCcc-----ccceeeeeE
Q 004475 31 AKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA----ETGE-------AKPLFESPDIC-----LNAVFGSFV 93 (751)
Q Consensus 31 ~~~~~p~~SPDG~-~iaf~~~~~~~~~~~~~~~~l~i~~~----~~g~-------~~~lt~~~~~~-----~~~~~~~~~ 93 (751)
..+...+|||||+ +||... ..+.|.++++ .+++ ...+....... ....+..++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGE----------KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEE----------TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred CceEEEEECCCCCcEEEEec----------CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 3688999999999 888753 3356777777 6666 22222210000 011477899
Q ss_pred EecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecC
Q 004475 94 WVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG 172 (751)
Q Consensus 94 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt 172 (751)
|+|||++|+....+ ..|.+++.+| ....+.
T Consensus 116 ~s~~~~~l~~~~~d-------------------------------------------------g~i~i~~~~~~~~~~~~ 146 (425)
T 1r5m_A 116 WSHDGNSIVTGVEN-------------------------------------------------GELRLWNKTGALLNVLN 146 (425)
T ss_dssp ECTTSSEEEEEETT-------------------------------------------------SCEEEEETTSCEEEEEC
T ss_pred EcCCCCEEEEEeCC-------------------------------------------------CeEEEEeCCCCeeeecc
Confidence 99999999987442 3566667766 445555
Q ss_pred CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC--------------------
Q 004475 173 TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE-------------------- 231 (751)
Q Consensus 173 ~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~-------------------- 231 (751)
.+ ..+..++|+|||++|+....+. .+.+|++.+++...........
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (425)
T 1r5m_A 147 FHRAPIVSVKWNKDGTHIISMDVEN-------------VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213 (425)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTC-------------CEEEEETTTTEEEEEECCC---------------CCCBSCCE
T ss_pred CCCccEEEEEECCCCCEEEEEecCC-------------eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEE
Confidence 45 7788999999999998765432 3555555443322111110000
Q ss_pred -----------------------CC-CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC
Q 004475 232 -----------------------DI-PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE 287 (751)
Q Consensus 232 -----------------------~~-~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (751)
.. ...+......+..++|+|+|+. |+... ..+.|+++++..
T Consensus 214 ~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~------------~d~~i~i~d~~~-- 278 (425)
T 1r5m_A 214 WVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL-LLSAS------------DDGTLRIWHGGN-- 278 (425)
T ss_dssp EEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE-EEEEE------------TTSCEEEECSSS--
T ss_pred EcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE-EEEEc------------CCCEEEEEECCC--
Confidence 00 0011122334668899999987 55543 235788888751
Q ss_pred CCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEE
Q 004475 288 GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 366 (751)
Q Consensus 288 ~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l 366 (751)
+.....+......+. +.|+|++ .|+... ....|.++++.++ ............+.. ++|+|||+.|
T Consensus 279 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~----~d~~i~i~d~~~~--~~~~~~~~~~~~i~~------~~~s~~~~~l 345 (425)
T 1r5m_A 279 GNSQNCFYGHSQSIVSASWVGDD-KVISCS----MDGSVRLWSLKQN--TLLALSIVDGVPIFA------GRISQDGQKY 345 (425)
T ss_dssp BSCSEEECCCSSCEEEEEEETTT-EEEEEE----TTSEEEEEETTTT--EEEEEEECTTCCEEE------EEECTTSSEE
T ss_pred CccceEecCCCccEEEEEECCCC-EEEEEe----CCCcEEEEECCCC--cEeEecccCCccEEE------EEEcCCCCEE
Confidence 233444544566677 9999999 555544 2346777888764 222222222222222 7899999998
Q ss_pred EEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 367 IAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
+....+ ..|.+||+.+++
T Consensus 346 ~~~~~d---------------------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 346 AVAFMD---------------------GQVNVYDLKKLN 363 (425)
T ss_dssp EEEETT---------------------SCEEEEECHHHH
T ss_pred EEEECC---------------------CeEEEEECCCCc
Confidence 887722 267888887655
No 194
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.65 E-value=2.5e-15 Score=153.90 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=135.2
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.++..+....+.+ .|+||++||.+.. ...+ ..+...|+ +||.|++ ++.+|+
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~-----------~~~~----~~~~~~L~-~~~~v~~---~D~~G~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSN-----------SAVF----EPLMIRLS-DRFTTIA---VDQRGH 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCC-----------GGGG----HHHHHTTT-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCC-----------HHHH----HHHHHHHH-cCCeEEE---EeCCCc
Confidence 3566676665522 4789999996411 1111 12333444 4799999 555677
Q ss_pred CCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc----
Q 004475 569 GDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---- 642 (751)
Q Consensus 569 g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~---- 642 (751)
|.+.. ......+..+|+..+++++. ..+++++|||+||.+|+.++.++|++++++|++++........
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTLA------RGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHHT------SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhC------CCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 76642 22345666777777777662 2689999999999999999999999999999998764311100
Q ss_pred --------cCcccc--c---------ccchhhHHHHH---------------------------hcCcccccCCCCCCEE
Q 004475 643 --------FGFQTE--F---------RTLWEATNVYI---------------------------EMSPITHANKIKKPIL 676 (751)
Q Consensus 643 --------~~~~~~--~---------~~~~~~~~~~~---------------------------~~~~~~~~~~~~~P~l 676 (751)
..+... . .........+. ..+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 000000 0 00000000000 0023334567899999
Q ss_pred EEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 677 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 677 i~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+++|++|..+| ...+.++.+.+. .++++++++++|.+. .+....+.+.+.+||+
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRP----DLPVVVVPGADHYVN-EVSPEITLKAITNFID 313 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCT----TSCEEEETTCCSCHH-HHCHHHHHHHHHHHHH
T ss_pred EEecCCCccCC--HHHHHHHHHhCC----CceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 99999999998 888888887663 357999999999875 5557788899999986
No 195
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.65 E-value=1.7e-15 Score=159.47 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=61.6
Q ss_pred ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC-CCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 667 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 667 ~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.+.++++|+|+++|++|.++| +..++.+.+.+.+.+..++++++++ ++|... .+....+.+.+.+||.+++.
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCCS
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhhh
Confidence 456789999999999999998 8999999999988777889999998 999865 44567788999999987653
No 196
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.65 E-value=5.3e-14 Score=144.24 Aligned_cols=278 Identities=14% Similarity=0.113 Sum_probs=166.5
Q ss_pred cccceeecCC----CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecC
Q 004475 32 KINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (751)
Q Consensus 32 ~~~~p~~SPD----G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 107 (751)
.+...+|+|+ ++.|+..+. ++...|| +..+++.........+ ...+..+.|+|+++.|+..+.+
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~--------D~~v~vW--~~~~~~~~~~~~l~gh--~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSL--------DDLVKVW--KWRDERLDLQWSLEGH--QLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp CEEEEEEC-------CEEEEEET--------TSCEEEE--EEETTEEEEEEEECCC--SSCEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEecCCCCCCCEEEEEcC--------CCCEEEE--ECCCCCeeeeeeeccC--CCCEEEEEECCCCCEEEEEeCC
Confidence 6889999986 456666432 3444555 5444443221111111 1146788999999988876442
Q ss_pred CCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-CceecCCC-ceEEeeeeCC
Q 004475 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSP 184 (751)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~~-~~~~~~~~Sp 184 (751)
..|.++|+ +| ..+.+..+ ..+..++|+|
T Consensus 102 -------------------------------------------------~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 102 -------------------------------------------------AHIRLWDLENGKQIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp -------------------------------------------------SEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred -------------------------------------------------CcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence 47888888 66 34445444 5667899999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
||++|+....+ ..+.+|++.+++...... .....+..++|+|||+. |+..+
T Consensus 133 dg~~l~~g~~d-------------g~v~i~~~~~~~~~~~~~------------~~~~~v~~~~~spdg~~-lasg~--- 183 (321)
T 3ow8_A 133 DSQYLATGTHV-------------GKVNIFGVESGKKEYSLD------------TRGKFILSIAYSPDGKY-LASGA--- 183 (321)
T ss_dssp TSSEEEEECTT-------------SEEEEEETTTCSEEEEEE------------CSSSCEEEEEECTTSSE-EEEEE---
T ss_pred CCCEEEEEcCC-------------CcEEEEEcCCCceeEEec------------CCCceEEEEEECCCCCE-EEEEc---
Confidence 99999876432 468899998664432111 11123558899999998 55543
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 343 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 343 (751)
..+.|.++++.. +.....+......+. +.|+|||+.|+.+.. ...|.+.++.++ ........
T Consensus 184 ---------~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~----dg~i~iwd~~~~--~~~~~~~~ 246 (321)
T 3ow8_A 184 ---------IDGIINIFDIAT--GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD----DGYIKIYDVQHA--NLAGTLSG 246 (321)
T ss_dssp ---------TTSCEEEEETTT--TEEEEEECCCSSCCCEEEECTTSCEEEEECT----TSCEEEEETTTC--CEEEEECC
T ss_pred ---------CCCeEEEEECCC--CcEEEEEcccCCceeEEEEcCCCCEEEEEcC----CCeEEEEECCCc--ceeEEEcC
Confidence 235788888751 222233334445566 899999998887652 235666676663 22222222
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceee
Q 004475 344 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 423 (751)
Q Consensus 344 ~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 423 (751)
....+.. ++|+|||+.|+..+.+ ..|.+||+.+++....+..... .+.
T Consensus 247 h~~~v~~------~~~sp~~~~l~s~s~D---------------------~~v~iwd~~~~~~~~~~~~h~~----~v~- 294 (321)
T 3ow8_A 247 HASWVLN------VAFCPDDTHFVSSSSD---------------------KSVKVWDVGTRTCVHTFFDHQD----QVW- 294 (321)
T ss_dssp CSSCEEE------EEECTTSSEEEEEETT---------------------SCEEEEETTTTEEEEEECCCSS----CEE-
T ss_pred CCCceEE------EEECCCCCEEEEEeCC---------------------CcEEEEeCCCCEEEEEEcCCCC----cEE-
Confidence 2222222 7899999998887732 2789999988876544332111 122
Q ss_pred eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475 424 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 458 (751)
Q Consensus 424 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~ 458 (751)
.++|+|||+.|+... .. +.|.++|.
T Consensus 295 ------~v~~s~~g~~l~s~~-~d---~~i~vwd~ 319 (321)
T 3ow8_A 295 ------GVKYNGNGSKIVSVG-DD---QEIHIYDC 319 (321)
T ss_dssp ------EEEECTTSSEEEEEE-TT---CCEEEEEC
T ss_pred ------EEEECCCCCEEEEEe-CC---CeEEEEeC
Confidence 258999999876543 21 33555553
No 197
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.65 E-value=8.8e-16 Score=144.71 Aligned_cols=182 Identities=13% Similarity=-0.014 Sum_probs=114.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|+||++||.+... . ..+.......|+++||.|++++++ ..+ .. ...+..+++.+.++.
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~~~~~~~~~~l~~~g~~v~~~d~~---~~~---~~--~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--NHWFPWLKKRLLADGVQADILNMP---NPL---QP--RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--STTHHHHHHHHHHTTCEEEEECCS---CTT---SC--CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCc-----------c--hhHHHHHHHHHHhCCcEEEEecCC---CCC---CC--CHHHHHHHHHHHHHh
Confidence 48899999964211 1 012222223577899999996664 111 11 233444444444332
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEccCCCCCCCCccCcccccccchhhHHHHHh-cCccccc
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE-MSPITHA 668 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 668 (751)
+ ..+++++||||||.+|+.++.++|+ +++++|+.+|....... +.. ...+.. ......+
T Consensus 63 ~-------~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~ 124 (192)
T 1uxo_A 63 L-------HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQM--------LDEFTQGSFDHQKI 124 (192)
T ss_dssp C-------CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CGG--------GGGGTCSCCCHHHH
T ss_pred c-------cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---chh--------hhhhhhcCCCHHHH
Confidence 2 3689999999999999999999999 99999999987542110 000 000000 0011223
Q ss_pred CCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 669 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 669 ~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.++++|+|+++|++|..+| ...++.+.+.+ ..+++++++++|.+.... . ..+..+.+||.+.+.
T Consensus 125 ~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~-~-~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDEG-F-TSLPIVYDVLTSYFS 188 (192)
T ss_dssp HHHEEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGGT-C-SCCHHHHHHHHHHHH
T ss_pred HhhcCCEEEEecCCCCcCC--HHHHHHHHHhc-----CceEEEeCCCcCcccccc-c-ccHHHHHHHHHHHHH
Confidence 4567899999999999998 88888887776 347999999999875322 1 112235666666554
No 198
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.65 E-value=2.3e-15 Score=158.51 Aligned_cols=177 Identities=13% Similarity=0.104 Sum_probs=115.1
Q ss_pred HHhCCeEEEEcCCCCCCC-CCCCCCC----------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEEeChH
Q 004475 550 FLARRFAVLAGPSIPIIG-EGDKLPN----------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYG 611 (751)
Q Consensus 550 ~~~~G~~v~~~~~~~~~g-~g~~~~~----------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~-l~G~S~G 611 (751)
|+++||.|+++|. +| +|.+... .....+..+|+.++++.+ +..++. |+|||||
T Consensus 94 L~~~g~~vi~~D~---~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~G 164 (377)
T 2b61_A 94 LDTDRYFFISSNV---LGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFG 164 (377)
T ss_dssp EETTTCEEEEECC---TTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHH
T ss_pred cccCCceEEEecC---CCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChh
Confidence 4578999999554 45 3333221 123455566665555443 346887 9999999
Q ss_pred HHHHHHHHHhCCCceeEEEEccCCCCCCCCc----------------cC---cc---------------------c-c--
Q 004475 612 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP----------------FG---FQ---------------------T-E-- 648 (751)
Q Consensus 612 G~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~----------------~~---~~---------------------~-~-- 648 (751)
|.+|+.+|.++|++++++|++++........ +. +. . .
T Consensus 165 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T 2b61_A 165 GMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL 244 (377)
T ss_dssp HHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHH
Confidence 9999999999999999999999864321000 00 00 0 0
Q ss_pred -------ccc--ch----hhHHH------------------------HHhcC-------cccccCCCCCCEEEEEcCCCC
Q 004475 649 -------FRT--LW----EATNV------------------------YIEMS-------PITHANKIKKPILIIHGEVDD 684 (751)
Q Consensus 649 -------~~~--~~----~~~~~------------------------~~~~~-------~~~~~~~~~~P~li~~G~~D~ 684 (751)
... ++ ...+. +.... ....+.++++|+|+++|++|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~ 324 (377)
T 2b61_A 245 AKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQ 324 (377)
T ss_dssp HHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCS
T ss_pred HHHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcc
Confidence 000 00 00000 00111 124467889999999999999
Q ss_pred CCCCChHHHHHHHHHHHhCCCcEEEEEeC-CCCCcCCccccHHHHHHHHHHHHHH
Q 004475 685 KVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 685 ~vp~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
++| +..+.+..+.+.+....+++++++ +++|... .+....+.+.+.+||.+
T Consensus 325 ~~~--~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 325 LFK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SSC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHHHHHHHHT
T ss_pred cCC--ccchHHHHHHHHhcCCCceEEEeCCCCCchhh-hcCHHHHHHHHHHHHhc
Confidence 998 865556666666665678999999 9999876 45567888999999874
No 199
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=5.8e-14 Score=146.15 Aligned_cols=255 Identities=10% Similarity=-0.016 Sum_probs=160.4
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-cc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-IC 84 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-~~ 84 (751)
.|+++|+.+ ++...... .+......+|||||++++++. .....|+++++++++......... ..
T Consensus 70 ~v~~~d~~~----~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~~~ 134 (353)
T 3vgz_A 70 VVYRLDPVT----LEVTQAIH--NDLKPFGATINNTTQTLWFGN---------TVNSAVTAIDAKTGEVKGRLVLDDRKR 134 (353)
T ss_dssp EEEEECTTT----CCEEEEEE--ESSCCCSEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEEESCCCCC
T ss_pred cEEEEcCCC----CeEEEEEe--cCCCcceEEECCCCCEEEEEe---------cCCCEEEEEeCCCCeeEEEEecCCCcc
Confidence 599999988 87765542 233467899999999887764 334689999999888644332211 10
Q ss_pred ---c-cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 85 ---L-NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 85 ---~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
. ......++|||||++|++.... ....|+
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------------------~~~~i~ 167 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIG-----------------------------------------------KESVIW 167 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEES-----------------------------------------------SSCEEE
T ss_pred ccccCCCCCceEEECCCCCEEEEEecC-----------------------------------------------CCceEE
Confidence 0 0013568999999998887421 014789
Q ss_pred EEcC-CCCce-ecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCcc
Q 004475 161 LGSL-DGTAK-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (751)
Q Consensus 161 ~~~~-~G~~~-~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 237 (751)
++|+ +++.. .+... .....++|+|||++|++... ...+++||+.+++..........
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~------- 227 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-------------DGELITIDTADNKILSRKKLLDD------- 227 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-------------TSEEEEEETTTTEEEEEEECCCS-------
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-------------CCeEEEEECCCCeEEEEEEcCCC-------
Confidence 9999 66443 33323 44678999999999988643 24688999987765433222110
Q ss_pred CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEee
Q 004475 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNET 316 (751)
Q Consensus 238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~ 316 (751)
........++|+|||++ +++... ..+.|++++.+ .+.......... .. +.|+|||+.|+++.
T Consensus 228 -~~~~~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~~---~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 228 -GKEHFFINISLDTARQR-AFITDS-----------KAAEVLVVDTR---NGNILAKVAAPE-SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp -SSCCCEEEEEEETTTTE-EEEEES-----------SSSEEEEEETT---TCCEEEEEECSS-CCCEEEETTTTEEEEEE
T ss_pred -CCCcccceEEECCCCCE-EEEEeC-----------CCCEEEEEECC---CCcEEEEEEcCC-CceEEECCCCCEEEEEE
Confidence 01122346899999998 655431 23589999885 333322222222 23 89999999877655
Q ss_pred eecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 317 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
. ....|++++..++ +.......... ... ++|+|||+.|++...
T Consensus 291 ~---~~~~v~~~d~~~~--~~~~~~~~~~~-~~~------~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 291 R---QAGKVSVIDAKSY--KVVKTFDTPTH-PNS------LALSADGKTLYVSVK 333 (353)
T ss_dssp T---TTTEEEEEETTTT--EEEEEEECCSE-EEE------EEECTTSCEEEEEEE
T ss_pred C---CCCeEEEEECCCC--eEEEEEecCCC-CCe------EEEcCCCCEEEEEEc
Confidence 2 2357889998874 22222222111 111 789999998877663
No 200
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.65 E-value=8.8e-16 Score=154.47 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=117.5
Q ss_pred HhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004475 551 LARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 627 (751)
Q Consensus 551 ~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 627 (751)
++++|.|++ ++.+|+|.+.... .......+|+.+.++.+ ..+++.|+||||||.+|+.+|.++|++++
T Consensus 51 L~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~ 121 (282)
T 1iup_A 51 LSKFYRVIA---PDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVD 121 (282)
T ss_dssp HTTTSEEEE---ECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEE
T ss_pred hccCCEEEE---ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHH
Confidence 367999999 6677888775432 23456667666666654 23689999999999999999999999999
Q ss_pred EEEEccCCCCCCCCc------cCccc--------------ccc--c------ch---hhH---HHHHhc-----------
Q 004475 628 CGIARSGSYNKTLTP------FGFQT--------------EFR--T------LW---EAT---NVYIEM----------- 662 (751)
Q Consensus 628 ~~v~~~~~~d~~~~~------~~~~~--------------~~~--~------~~---~~~---~~~~~~----------- 662 (751)
++|+.++........ +.+.. ... . .+ ..+ ..+...
T Consensus 122 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (282)
T 1iup_A 122 RMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDA 201 (282)
T ss_dssp EEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHH
T ss_pred HHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccc
Confidence 999998754211000 00000 000 0 00 000 000000
Q ss_pred -C-cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 663 -S-PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 663 -~-~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
. ....+.++++|+|+++|++|..+| ...++.+.+.+. ..++++++++||... .+..+.+.+.+.+||.+.
T Consensus 202 ~~~~~~~l~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 202 LASSDEDIKTLPNETLIIHGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp HCCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred cccchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhcC
Confidence 0 013467889999999999999998 888777766553 468999999999875 566788899999999863
No 201
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.64 E-value=2.7e-13 Score=138.56 Aligned_cols=268 Identities=12% Similarity=0.153 Sum_probs=167.9
Q ss_pred ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
..+...+|||||++||... ....|.++++.+++.......... .+..++|+|||+.|+..+.+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~d--- 86 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSS----------ADKLIKIWGAYDGKFEKTISGHKL----GISDVAWSSDSNLLVSASDD--- 86 (312)
T ss_dssp SCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETT---
T ss_pred CcEEEEEECCCCCEEEEee----------CCCeEEEEeCCCcccchhhccCCC----ceEEEEEcCCCCEEEEECCC---
Confidence 3688999999999998863 335677788888775554333221 47789999999999887542
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCc
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~ 187 (751)
..|.++|+ +++ ...+..+ ..+..+.|+|||+
T Consensus 87 ----------------------------------------------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (312)
T 4ery_A 87 ----------------------------------------------KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 120 (312)
T ss_dssp ----------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred ----------------------------------------------CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 46778888 564 3445444 6788999999999
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
+|+....+ ..+.+||+.+++.. .+.. ....+..+.|+|||+. ++..+
T Consensus 121 ~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~-l~~~~----- 168 (312)
T 4ery_A 121 LIVSGSFD-------------ESVRIWDVKTGKCLKTLPA-------------HSDPVSAVHFNRDGSL-IVSSS----- 168 (312)
T ss_dssp EEEEEETT-------------SCEEEEETTTCCEEEEECC-------------CSSCEEEEEECTTSSE-EEEEE-----
T ss_pred EEEEEeCC-------------CcEEEEECCCCEEEEEecC-------------CCCcEEEEEEcCCCCE-EEEEe-----
Confidence 98876543 35889999865433 2221 1223568899999997 55543
Q ss_pred CCccccCcccceeeccCCCCCCCCceEeE-eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc
Q 004475 267 DANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 344 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 344 (751)
..+.|.++++.. +.....+. .....+. +.|+|+|+.|+.... ...|.+.++.++ .........
T Consensus 169 -------~d~~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~--~~~~~~~~~ 233 (312)
T 4ery_A 169 -------YDGLCRIWDTAS--GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL----DNTLKLWDYSKG--KCLKTYTGH 233 (312)
T ss_dssp -------TTSCEEEEETTT--CCEEEEECCSSCCCEEEEEECTTSSEEEEEET----TTEEEEEETTTT--EEEEEECSS
T ss_pred -------CCCcEEEEECCC--CceeeEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCC--cEEEEEEec
Confidence 235788888751 11222222 2234456 899999999887652 246777777764 222222211
Q ss_pred cccccCCCCCCCeeeC-CCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceee
Q 004475 345 FENVYSDPGSPMMTRT-STGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 423 (751)
Q Consensus 345 ~~~~~~~~~~~~~~~s-pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 423 (751)
..... .....++ ++|++|+..+. ...|++||+.+++.......... .+.
T Consensus 234 ~~~~~----~~~~~~~~~~~~~l~sg~~---------------------dg~i~vwd~~~~~~~~~~~~h~~----~v~- 283 (312)
T 4ery_A 234 KNEKY----CIFANFSVTGGKWIVSGSE---------------------DNLVYIWNLQTKEIVQKLQGHTD----VVI- 283 (312)
T ss_dssp CCSSS----CCCEEEECSSSCEEEECCT---------------------TSCEEEEETTTCCEEEEECCCSS----CEE-
T ss_pred CCceE----EEEEEEEeCCCcEEEEECC---------------------CCEEEEEECCCchhhhhhhccCC----cEE-
Confidence 11100 0012344 66777766552 23789999998876554432211 122
Q ss_pred eecCCcceeeccCCCEEEEEE
Q 004475 424 LVFGQGEEDINLNQLKILTSK 444 (751)
Q Consensus 424 ~~~~~~~~~~s~dg~~l~~~~ 444 (751)
.++|+|+++.++...
T Consensus 284 ------~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 284 ------STACHPTENIIASAA 298 (312)
T ss_dssp ------EEEECSSSSEEEEEE
T ss_pred ------EEeecCcCCceEEEE
Confidence 258899998777554
No 202
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.63 E-value=9.4e-15 Score=145.35 Aligned_cols=196 Identities=8% Similarity=-0.020 Sum_probs=125.8
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 588 (751)
.|.||++||.+. +...| ..+...|+++||.|++ +|.+|+|.+.... ....+..+|+.++
T Consensus 10 g~~vvllHG~~~-----------~~~~w----~~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCL-----------GAWIW----YKLKPLLESAGHKVTA---VDLSAAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTC-----------CGGGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCcc-----------ccchH----HHHHHHHHhCCCEEEE---eecCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 578999999641 11112 1345567789999999 6677888774421 2355666776666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc--------------Cccc-------
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--------------GFQT------- 647 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~--------------~~~~------- 647 (751)
++.+ +. ..++.|+||||||.+++.++.++|++++++|++++......... .+..
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 6654 11 25899999999999999999999999999999886421100000 0000
Q ss_pred ---cc-ccchhhHH---------------HHH-h-cCcc----------ccc---CCCCCCEEEEEcCCCCCCCCChHHH
Q 004475 648 ---EF-RTLWEATN---------------VYI-E-MSPI----------THA---NKIKKPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 648 ---~~-~~~~~~~~---------------~~~-~-~~~~----------~~~---~~~~~P~li~~G~~D~~vp~~~~~~ 693 (751)
.. .......+ .+. . ..+. ..+ ...++|+|+++|++|..+| ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 00 00000000 000 0 0000 001 1136899999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.+.+.+. ..++++++++||... .+..+.+.+.+.+|+.
T Consensus 225 ~~~~~~~p----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVG----ADKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCC----CceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 87777764 348999999999876 5667888888888874
No 203
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.63 E-value=1.2e-13 Score=148.41 Aligned_cols=297 Identities=6% Similarity=-0.023 Sum_probs=179.4
Q ss_pred eeecCCCCeEEEEEeecccc------cccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEED------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~------~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
|.|+|+++.++++....... +..++...||+++.+++..+.+...... .....++|+|++ .++++...
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~-~~~~~~~~-- 142 (433)
T 3bws_A 69 PVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFIDNT-RLAIPLLE-- 142 (433)
T ss_dssp ECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESSSS-EEEEEBTT--
T ss_pred eeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeCCC-eEEEEeCC--
Confidence 44999998887765421110 1112334889988876644333221111 124578999955 56655321
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecC------CC-ceEEeee
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFG------TP-AVYTAVE 181 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt------~~-~~~~~~~ 181 (751)
...|+++|+ +|+..+.. .+ ..+..++
T Consensus 143 ----------------------------------------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~ 176 (433)
T 3bws_A 143 ----------------------------------------------DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETIS 176 (433)
T ss_dssp ----------------------------------------------SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEE
T ss_pred ----------------------------------------------CCeEEEEECCCCeEeeecCcccccccCCceeEEE
Confidence 035888888 66554432 22 4678899
Q ss_pred eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
|+|||+.++.... ...+++||+++++....... ....+..++|+|||+. ++++.
T Consensus 177 ~~~~~~~~~s~~~-------------d~~v~~~d~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-l~~~~ 230 (433)
T 3bws_A 177 IPEHNELWVSQMQ-------------ANAVHVFDLKTLAYKATVDL------------TGKWSKILLYDPIRDL-VYCSN 230 (433)
T ss_dssp EGGGTEEEEEEGG-------------GTEEEEEETTTCCEEEEEEC------------SSSSEEEEEEETTTTE-EEEEE
T ss_pred EcCCCEEEEEECC-------------CCEEEEEECCCceEEEEEcC------------CCCCeeEEEEcCCCCE-EEEEe
Confidence 9999986655432 34689999987644322111 1123457899999998 55543
Q ss_pred eccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc----cceeEEEecCCCCCCc
Q 004475 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT----SQTRTWLVCPGSKDVA 336 (751)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~----~~~~l~~~~~~~~~~~ 336 (751)
. ..+.|+++++. .+............. +.|+|||+.|++...... ....|+++++.++ +
T Consensus 231 ~-----------~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~ 294 (433)
T 3bws_A 231 W-----------ISEDISVIDRK---TKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--K 294 (433)
T ss_dssp T-----------TTTEEEEEETT---TTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--E
T ss_pred c-----------CCCcEEEEECC---CCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--c
Confidence 1 22578889885 333322223344456 899999999887764321 2458889998874 2
Q ss_pred ceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchh
Q 004475 337 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREK 416 (751)
Q Consensus 337 ~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 416 (751)
......... .... ++|+|||+.|++... ....|++||+.+++..........
T Consensus 295 ~~~~~~~~~-~~~~------~~~~~~g~~l~~~~~--------------------~~~~v~v~d~~~~~~~~~~~~~~~- 346 (433)
T 3bws_A 295 LIDTIGPPG-NKRH------IVSGNTENKIYVSDM--------------------CCSKIEVYDLKEKKVQKSIPVFDK- 346 (433)
T ss_dssp EEEEEEEEE-CEEE------EEECSSTTEEEEEET--------------------TTTEEEEEETTTTEEEEEEECSSS-
T ss_pred EEeeccCCC-Ccce------EEECCCCCEEEEEec--------------------CCCEEEEEECCCCcEEEEecCCCC-
Confidence 233222111 1111 789999998887751 233789999998876554432211
Q ss_pred hhhceeeeecCCcceeeccCCCEEEEEEecCCCC-----------CeEEEEEcCCCceeE
Q 004475 417 YFETAVALVFGQGEEDINLNQLKILTSKESKTEI-----------TQYHILSWPLKKSSQ 465 (751)
Q Consensus 417 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-----------~~l~~~~~~~g~~~~ 465 (751)
+ ..++|+|||+.|++........ +.++++|+.+++...
T Consensus 347 ----~-------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 347 ----P-------NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ----E-------EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ----C-------CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 2 2368999999888776543322 489999998876554
No 204
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.63 E-value=6.9e-15 Score=153.43 Aligned_cols=118 Identities=17% Similarity=0.140 Sum_probs=84.8
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.+...-|++ ...|+||++||.+. +...|. .+...|+++||.|++ .+.+|+
T Consensus 10 ~~g~~l~y~~~G~~~------~~~~~vv~~hG~~~-----------~~~~~~----~~~~~l~~~g~~vi~---~d~~g~ 65 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD------QQGPLVVLLHGFPE-----------SWYSWR----HQIPALAGAGYRVVA---IDQRGY 65 (356)
T ss_dssp ETTEEEEEEEECCTT------CCSCEEEEECCTTC-----------CGGGGT----TTHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEEecCCC------CCCCEEEEECCCCC-----------cHHHHH----HHHHHHHHcCCEEEE---EcCCCC
Confidence 467788888876642 12588999999641 112221 345677888999999 556677
Q ss_pred CCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 569 GDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 569 g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
|.+.... .......+|+..+++.+ +.++++++||||||.+|+.++.++|++++++|++++..
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 7764432 23455666666666654 34689999999999999999999999999999988754
No 205
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.63 E-value=7.7e-13 Score=139.48 Aligned_cols=299 Identities=8% Similarity=0.031 Sum_probs=179.4
Q ss_pred ccccceeecCCC-CeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEec-CCcEEEEeecCC
Q 004475 31 AKINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSS 108 (751)
Q Consensus 31 ~~~~~p~~SPDG-~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~ 108 (751)
..+...+||||| +.||... ....|.++++.+++.........+ ...+..++|+| +++.|+..+.+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d- 140 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGS----------KGGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSIR- 140 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEE----------BTSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEETT-
T ss_pred CCEEEEEECCCCCCEEEEEc----------CCCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeCC-
Confidence 368899999999 7777753 336788889888776555432111 11478899999 67777766432
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC----ceEEeeeeC
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPS 183 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~----~~~~~~~~S 183 (751)
..|.++++.+ ..+.+... ..+..++|+
T Consensus 141 ------------------------------------------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 141 ------------------------------------------------GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp ------------------------------------------------TEEEEEETTSCEEEEEECCCCSSCCEEEEEEE
T ss_pred ------------------------------------------------CEEEEEECCCCceEEEeccCCCCCCeEEEEEC
Confidence 4677788855 33333222 457899999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEec
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~ 263 (751)
|||++|+....+ ..+.+||+.+.....+..+. ..+..++|+|+++.+++..+
T Consensus 173 ~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s~~-- 224 (383)
T 3ei3_B 173 VSRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMATSS-- 224 (383)
T ss_dssp TTTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEEEE--
T ss_pred CCCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEEEe--
Confidence 999988876433 46889999766555543322 33568999999996344443
Q ss_pred cCCCCccccCcccceeeccCCCCCC-CCceEeEeeceeEE-EEEec-CCceEEEeeeecccceeEEEecCCCCCCcceee
Q 004475 264 DRGDANVEVSPRDIIYTQPAEPAEG-EKPEILHKLDLRFS-VSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 340 (751)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~-~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 340 (751)
..+.|.++++..... ............+. +.|+| ||+.|+.... ...|.++++.++ .....+
T Consensus 225 ----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~-~~~~~~ 289 (383)
T 3ei3_B 225 ----------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDW-SKPDQI 289 (383)
T ss_dssp ----------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBT-TSCSEE
T ss_pred ----------CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCC-cccccc
Confidence 235788888752111 22222334556677 99999 9999887652 246777777764 222233
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhc
Q 004475 341 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 420 (751)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 420 (751)
..... ............|+|++..++..... ++.+ -......|++||+.+++..........
T Consensus 290 ~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~s~---dg~~---------s~s~d~~i~iwd~~~~~~~~~l~~~~~----- 351 (383)
T 3ei3_B 290 IIHPH-RQFQHLTPIKATWHPMYDLIVAGRYP---DDQL---------LLNDKRTIDIYDANSGGLVHQLRDPNA----- 351 (383)
T ss_dssp EECCB-CCCTTSCCCCCEECSSSSEEEEECBC---CTTT---------CTTCCCCEEEEETTTCCEEEEECBTTB-----
T ss_pred ccccc-cccccccceEEeccCCCCceEEEecC---Cccc---------ccCCCCeEEEEecCCCceeeeecCCCC-----
Confidence 22111 11110111114688888877654421 1111 112345799999998876544432110
Q ss_pred eeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 421 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 421 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
......++|+|||+.|+.. . . ..|.++++++
T Consensus 352 ----~~~~~~~~~s~~g~~l~s~-s--d--~~i~iw~~~~ 382 (383)
T 3ei3_B 352 ----AGIISLNKFSPTGDVLASG-M--G--FNILIWNRED 382 (383)
T ss_dssp ----CSCCCEEEECTTSSEEEEE-E--T--TEEEEEECC-
T ss_pred ----CceEEEEEEecCccEEEEe-c--C--CcEEEEecCC
Confidence 0111224899999977655 2 2 5688888653
No 206
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.63 E-value=1.9e-15 Score=151.12 Aligned_cols=196 Identities=16% Similarity=0.177 Sum_probs=127.0
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc------hhHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND------RFVEQLVSSA 585 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~------~~~~~~~~d~ 585 (751)
.|+||++||.+. +...|.. ....| .++|.|++ ++.+|+|.+.... .......+|+
T Consensus 20 ~~~vvllHG~~~-----------~~~~w~~----~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 20 KASIMFAPGFGC-----------DQSVWNA----VAPAF-EEDHRVIL---FDYVGSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp SSEEEEECCTTC-----------CGGGGTT----TGGGG-TTTSEEEE---CCCSCCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred CCcEEEEcCCCC-----------chhhHHH----HHHHH-HhcCeEEE---ECCCCCCCCCCCcccccccccHHHHHHHH
Confidence 378999999641 1122221 12233 35799999 6677888775321 1245566777
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc--c--Ccccc-----------cc
Q 004475 586 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--F--GFQTE-----------FR 650 (751)
Q Consensus 586 ~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~--~--~~~~~-----------~~ 650 (751)
.++++.+ +..++.++||||||.+|+.+|.++|++++++|+.++........ + .+... ..
T Consensus 81 ~~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 81 LDVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 6666554 23689999999999999999999999999999988742110000 0 00000 00
Q ss_pred cchh------------h---HHH----HH---------------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 651 TLWE------------A---TNV----YI---------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 651 ~~~~------------~---~~~----~~---------------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
..|. . .+. +. .......+.++++|+|+++|++|..+| ...++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~ 232 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYM 232 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHH
Confidence 0000 0 000 00 011122456789999999999999998 7777766
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
.+.+. ..+++++++++|... .+..+.+.+.+.+||.++
T Consensus 233 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 233 HQHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHH
T ss_pred HHHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhc
Confidence 65543 468999999999875 566788999999999875
No 207
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.63 E-value=6.2e-14 Score=149.62 Aligned_cols=307 Identities=10% Similarity=0.097 Sum_probs=173.9
Q ss_pred cccceeecCCCCeEEEEEeecc-cccccCCceeEEEEEcCCCCee-eccCCCCccccceeeeeEEecCCcEEEEeecCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDE-EDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~-~~~~~~~~~~l~i~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
.+...+|||||+.++++..... ..........|.++++.+++.. .+..... ...+..++|+|||++|+..+.+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-- 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQV---DSKFNDLDWSHNNKIIAGALDN-- 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCC---SSCEEEEEECSSSSCEEEEESS--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEec---CCceEEEEECCCCCeEEEEccC--
Confidence 5778999999995555442110 0000023467888888877532 2211111 1247889999999999887442
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-C---C--CceecCCC-ceEEeeee
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---G--TAKDFGTP-AVYTAVEP 182 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---G--~~~~lt~~-~~~~~~~~ 182 (751)
..|.++++ + + ....+..+ ..+..++|
T Consensus 89 -----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 89 -----------------------------------------------GSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp -----------------------------------------------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred -----------------------------------------------CeEEEeecccccccccchhhccCCccceEEEEE
Confidence 35666666 3 2 33444445 67889999
Q ss_pred CCC-CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475 183 SPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 183 SpD-G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
+|| ++.|+.... ...|.+||+.+++.......... ...+......+..++|+|++..+++...
T Consensus 122 ~~~~~~~l~s~~~-------------dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 122 NAKQDNVLASGGN-------------NGEIFIWDMNKCTESPSNYTPLT---PGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp CSSSTTBEEEECS-------------SSCEEBCBTTTTSSCTTTCCCBC---CCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred cCCCCCEEEEEcC-------------CCeEEEEECCCCccccccccccc---cccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 999 666665433 23688999987641100000000 0011122334678999999666244432
Q ss_pred eccCCCCccccCcccceeeccCCCCCCCCc-eEeEee------ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKL------DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~------~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
..+.|.++++. .... ..+... ...+. +.|+|++..+++....+.....|.++++.++
T Consensus 186 ------------~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 186 ------------SSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp ------------SSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred ------------CCCCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 23578888885 2222 222222 44566 9999998644443322211125666666653
Q ss_pred CCcceeeee-cccccccCCCCCCCeeeCC-CCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 334 DVAPRVLFD-RVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 334 ~~~~~~l~~-~~~~~~~~~~~~~~~~~sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
..+..... .....+.. ++|+| ||+.|+..+.+ ..|++||+.+++....+.
T Consensus 251 -~~~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~~d---------------------g~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 251 -NTPLQTLNQGHQKGILS------LDWCHQDEHLLLSSGRD---------------------NTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp -TSCSBCCCSCCSSCEEE------EEECSSCSSCEEEEESS---------------------SEEEEECSSSCCEEEEEE
T ss_pred -CCCcEEeecCccCceeE------EEeCCCCCCeEEEEeCC---------------------CCEEEeeCCCCccceeec
Confidence 12222222 22222222 78999 89888887732 378999998887654433
Q ss_pred ccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475 412 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 463 (751)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~ 463 (751)
... .....++|+||+..++++... -+.+.++++.+++.
T Consensus 303 ~~~-----------~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 303 ARG-----------NWCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLTN 340 (416)
T ss_dssp CSS-----------SCCCCEEECTTCTTEEEECCS---SSEEEEEESCCCCC
T ss_pred CCC-----------CceEEEEECCCCCCEEEEEec---CCcEEEEEccCCCC
Confidence 221 112236899999555555433 35688889877543
No 208
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.63 E-value=6.4e-15 Score=138.62 Aligned_cols=129 Identities=14% Similarity=0.127 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHH
Q 004475 578 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 657 (751)
Q Consensus 578 ~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 657 (751)
..+..+|+.++++.+ + .+++++||||||.+|+.++.++|++++++|+++|...... .+
T Consensus 58 ~~~~~~~~~~~~~~~------~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~~------------ 115 (191)
T 3bdv_A 58 LDRWVLAIRRELSVC------T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---EI------------ 115 (191)
T ss_dssp HHHHHHHHHHHHHTC------S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---TC------------
T ss_pred HHHHHHHHHHHHHhc------C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---cC------------
Confidence 345555555555432 3 6899999999999999999999999999999998754210 00
Q ss_pred HHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc--cHHHHHHHHHHH
Q 004475 658 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRW 735 (751)
Q Consensus 658 ~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~f 735 (751)
.....+.++++|+|+++|++|..+| +..++.+.+.+ .++++++++++|...... ...+.++.+.+|
T Consensus 116 -----~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~f 183 (191)
T 3bdv_A 116 -----DDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEF 183 (191)
T ss_dssp -----TTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHH
T ss_pred -----ccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHH
Confidence 0003456788999999999999998 88888888876 358999999999975421 344556888888
Q ss_pred HHHHh
Q 004475 736 LQKYC 740 (751)
Q Consensus 736 l~~~l 740 (751)
|++..
T Consensus 184 l~~~~ 188 (191)
T 3bdv_A 184 SEILI 188 (191)
T ss_dssp HHTTC
T ss_pred HHHhc
Confidence 87653
No 209
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.63 E-value=1.3e-14 Score=148.76 Aligned_cols=215 Identities=20% Similarity=0.206 Sum_probs=128.5
Q ss_pred EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC
Q 004475 484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 563 (751)
Q Consensus 484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~ 563 (751)
..+...+|..+.....-+++ .|.||++||++... .. ......+...||.|++ +
T Consensus 17 ~~~~~~~g~~l~~~~~g~~~--------g~~vvllHG~~~~~-------------~~---~~~~~~~~~~~~~vi~---~ 69 (317)
T 1wm1_A 17 GWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGG-------------IS---PHHRQLFDPERYKVLL---F 69 (317)
T ss_dssp EEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCC-------------CC---GGGGGGSCTTTEEEEE---E
T ss_pred eEEEcCCCcEEEEEEcCCCC--------CCcEEEECCCCCcc-------------cc---hhhhhhccccCCeEEE---E
Confidence 34454567777665554322 35689999964110 00 0111122357999999 6
Q ss_pred CCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC
Q 004475 564 PIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 639 (751)
Q Consensus 564 ~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~ 639 (751)
|.+|+|.+.... .......+|+.++++.+ +.+++.|+||||||.+|+.+|.++|++++++|+.++.....
T Consensus 70 D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 143 (317)
T 1wm1_A 70 DQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRK 143 (317)
T ss_dssp CCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCH
T ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCch
Confidence 677888774321 22445566665555543 34689999999999999999999999999999987642210
Q ss_pred -------------CCc--c-----Ccccccc-----------------------cch-------------------hhHH
Q 004475 640 -------------LTP--F-----GFQTEFR-----------------------TLW-------------------EATN 657 (751)
Q Consensus 640 -------------~~~--~-----~~~~~~~-----------------------~~~-------------------~~~~ 657 (751)
..+ + ....... ..| ....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (317)
T 1wm1_A 144 QRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD 223 (317)
T ss_dssp HHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHH
T ss_pred hhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccc
Confidence 000 0 0000000 000 0000
Q ss_pred ---H-------HHh-------cC-cccccCCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCc
Q 004475 658 ---V-------YIE-------MS-PITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 718 (751)
Q Consensus 658 ---~-------~~~-------~~-~~~~~~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 718 (751)
. +.. .. ....+.+++ +|+|+++|++|..+| +..++.+.+.+. ..++++++++||.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~--~~~~~~l~~~~p----~~~~~~i~~~gH~ 297 (317)
T 1wm1_A 224 FALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQ--VQNAWDLAKAWP----EAELHIVEGAGHS 297 (317)
T ss_dssp HHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSC--HHHHHHHHHHCT----TSEEEEETTCCSS
T ss_pred hhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCC--HHHHHHHHhhCC----CceEEEECCCCCC
Confidence 0 000 00 122345564 999999999999998 888877777664 3589999999998
Q ss_pred CCccccHHHHHHHHHHHHH
Q 004475 719 YAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 719 ~~~~~~~~~~~~~~~~fl~ 737 (751)
....+....+...+.+|+.
T Consensus 298 ~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 298 YDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp TTSHHHHHHHHHHHHHHTC
T ss_pred CCCcchHHHHHHHHHHHhc
Confidence 6433334555666666653
No 210
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.63 E-value=4.7e-15 Score=150.37 Aligned_cols=210 Identities=15% Similarity=0.096 Sum_probs=133.7
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
+|..+....+.+++ .|+||++||.+.. ...+. .....| .+||.|++ ++.+|+|
T Consensus 18 ~g~~l~~~~~g~~~--------~~~vl~lHG~~~~-----------~~~~~----~~~~~l-~~~~~v~~---~d~~G~G 70 (299)
T 3g9x_A 18 LGERMHYVDVGPRD--------GTPVLFLHGNPTS-----------SYLWR----NIIPHV-APSHRCIA---PDLIGMG 70 (299)
T ss_dssp TTEEEEEEEESCSS--------SCCEEEECCTTCC-----------GGGGT----TTHHHH-TTTSCEEE---ECCTTST
T ss_pred CCeEEEEEecCCCC--------CCEEEEECCCCcc-----------HHHHH----HHHHHH-ccCCEEEe---eCCCCCC
Confidence 67778777765432 4789999996421 12222 223444 57999999 5666777
Q ss_pred CCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-cC--
Q 004475 570 DKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG-- 644 (751)
Q Consensus 570 ~~~~~~--~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~~-- 644 (751)
.+.... ....+..+|+.++++.+ +.++++++|||+||.+|+.+|.++|++++++|++++........ +.
T Consensus 71 ~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 144 (299)
T 3g9x_A 71 KSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEF 144 (299)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGG
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchH
Confidence 764432 34556667777666654 34689999999999999999999999999999998543321000 00
Q ss_pred c-------ccc---------c------------ccch--hhH-----------------HHHHhc--------------C
Q 004475 645 F-------QTE---------F------------RTLW--EAT-----------------NVYIEM--------------S 663 (751)
Q Consensus 645 ~-------~~~---------~------------~~~~--~~~-----------------~~~~~~--------------~ 663 (751)
. ... . .... ... ..+... .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp GHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhh
Confidence 0 000 0 0000 000 000000 0
Q ss_pred cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 664 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 664 ~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
....+.++++|+|+++|++|..+| +..++.+.+.+. .++++++++++|.+. .+..+.+.+.+.+|+...
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGGG
T ss_pred hhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhhh
Confidence 111245678999999999999998 888877776653 468999999999875 455666666666665544
No 211
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.63 E-value=1.7e-14 Score=145.75 Aligned_cols=213 Identities=14% Similarity=0.115 Sum_probs=135.1
Q ss_pred cCCC-ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCC
Q 004475 488 RKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 566 (751)
Q Consensus 488 ~~~~-~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~ 566 (751)
..+| ..+.....-+ ++.|.||++||.+.+. .....|. .....|++ .|.|++ +|.+
T Consensus 19 ~~~g~~~l~y~~~G~--------g~~~~vvllHG~~pg~-----------~~~~~w~-~~~~~L~~-~~~via---~Dl~ 74 (291)
T 2wue_A 19 DVDGPLKLHYHEAGV--------GNDQTVVLLHGGGPGA-----------ASWTNFS-RNIAVLAR-HFHVLA---VDQP 74 (291)
T ss_dssp ESSSEEEEEEEEECT--------TCSSEEEEECCCCTTC-----------CHHHHTT-TTHHHHTT-TSEEEE---ECCT
T ss_pred EeCCcEEEEEEecCC--------CCCCcEEEECCCCCcc-----------chHHHHH-HHHHHHHh-cCEEEE---ECCC
Confidence 3467 6776655421 2246899999953110 0111111 22344544 499999 6677
Q ss_pred CCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--CC
Q 004475 567 GEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LT 641 (751)
Q Consensus 567 g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~--~~ 641 (751)
|+|.+.... ....+..+|+.++++.+ +.+++.|+||||||.+|+.+|.++|++++++|++++..... ..
T Consensus 75 G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~ 148 (291)
T 2wue_A 75 GYGHSDKRAEHGQFNRYAAMALKGLFDQL------GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFA 148 (291)
T ss_dssp TSTTSCCCSCCSSHHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSS
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHh------CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccc
Confidence 888775432 23556667777666655 23689999999999999999999999999999998754211 00
Q ss_pred c--c-Cc---------cc-------------cccc---c-----h---hhHHH----HH---h-cC-----cc--cccCC
Q 004475 642 P--F-GF---------QT-------------EFRT---L-----W---EATNV----YI---E-MS-----PI--THANK 670 (751)
Q Consensus 642 ~--~-~~---------~~-------------~~~~---~-----~---~~~~~----~~---~-~~-----~~--~~~~~ 670 (751)
. . .. .. .... . + ..+.. +. . .. .. ..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (291)
T 2wue_A 149 PDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR 228 (291)
T ss_dssp CSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG
T ss_pred cccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh
Confidence 0 0 00 00 0000 0 0 00000 00 0 00 11 45667
Q ss_pred CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 671 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 671 ~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+++|+|+++|++|..+| ...++.+.+.+. ..+++++++++|... .+..+.+.+.+.+||.
T Consensus 229 i~~P~lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 229 LRQPVLLIWGREDRVNP--LDGALVALKTIP----RAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLG 288 (291)
T ss_dssp CCSCEEEEEETTCSSSC--GGGGHHHHHHST----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHTT
T ss_pred CCCCeEEEecCCCCCCC--HHHHHHHHHHCC----CCeEEEeCCCCCChh-hhCHHHHHHHHHHHHh
Confidence 89999999999999998 887777766553 468999999999875 4567788888888885
No 212
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.62 E-value=9e-15 Score=150.75 Aligned_cols=214 Identities=18% Similarity=0.228 Sum_probs=133.9
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+....+- + .|+||++||.+. ....| ......|+++||.|++ ++.+|+
T Consensus 18 ~~g~~l~y~~~G--------~--g~~vvllHG~~~--------------~~~~w-~~~~~~L~~~g~~via---~Dl~G~ 69 (328)
T 2cjp_A 18 VNGLNMHLAELG--------E--GPTILFIHGFPE--------------LWYSW-RHQMVYLAERGYRAVA---PDLRGY 69 (328)
T ss_dssp ETTEEEEEEEEC--------S--SSEEEEECCTTC--------------CGGGG-HHHHHHHHTTTCEEEE---ECCTTS
T ss_pred CCCcEEEEEEcC--------C--CCEEEEECCCCC--------------chHHH-HHHHHHHHHCCcEEEE---ECCCCC
Confidence 467677665542 1 378999999641 11111 1344567778999999 667788
Q ss_pred CCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC--
Q 004475 569 GDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-- 640 (751)
Q Consensus 569 g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~-- 640 (751)
|.+... ........+|+.++++.+.. +.+++.|+||||||.+|+.+|.++|++++++|++++......
T Consensus 70 G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~ 145 (328)
T 2cjp_A 70 GDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPK 145 (328)
T ss_dssp TTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSS
T ss_pred CCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCccccc
Confidence 877543 12356677888888877731 246899999999999999999999999999999875432100
Q ss_pred -Ccc-------C-------cccc-------------------------------cc-------------cchhh---HHH
Q 004475 641 -TPF-------G-------FQTE-------------------------------FR-------------TLWEA---TNV 658 (751)
Q Consensus 641 -~~~-------~-------~~~~-------------------------------~~-------------~~~~~---~~~ 658 (751)
... . +... .. ..|.. .+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (328)
T 2cjp_A 146 MNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDY 225 (328)
T ss_dssp CCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHH
T ss_pred CChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHH
Confidence 000 0 0000 00 00000 000
Q ss_pred H----H------------hc------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH--HHHHhCCCcE-EEEEeC
Q 004475 659 Y----I------------EM------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF--DALKGHGALS-RLVLLP 713 (751)
Q Consensus 659 ~----~------------~~------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~--~~l~~~~~~~-~~~~~~ 713 (751)
+ . .. .....+.++++|+|+++|++|..+| +..+.+.. +.+.+.-... ++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~i~ 303 (328)
T 2cjp_A 226 YANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYH--IPGAKEYIHNGGFKKDVPLLEEVVVLE 303 (328)
T ss_dssp HHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGG--STTHHHHHHHSHHHHHSTTBCCCEEET
T ss_pred HHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCccccc--CcchhhhhhhhhHHHHhcCCeeEEEcC
Confidence 0 0 00 0001246789999999999999987 54332222 2333322345 789999
Q ss_pred CCCCcCCccccHHHHHHHHHHHHH
Q 004475 714 FEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 714 ~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
++||... .+..+.+.+.+.+||.
T Consensus 304 ~~gH~~~-~e~p~~~~~~i~~fl~ 326 (328)
T 2cjp_A 304 GAAHFVS-QERPHEISKHIYDFIQ 326 (328)
T ss_dssp TCCSCHH-HHSHHHHHHHHHHHHT
T ss_pred CCCCCcc-hhCHHHHHHHHHHHHH
Confidence 9999876 5567888999999985
No 213
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.62 E-value=7.7e-15 Score=149.66 Aligned_cols=209 Identities=13% Similarity=0.049 Sum_probs=134.7
Q ss_pred ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC
Q 004475 492 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 571 (751)
Q Consensus 492 ~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~ 571 (751)
..+.+...-|.+ +.|.||++||.+. +...| . .+...|+++||.|++ +|.+|+|.+
T Consensus 34 ~~l~y~~~G~~~-------~g~~vvllHG~~~-----------~~~~w---~-~~~~~L~~~g~rvia---~Dl~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-------AEDVFLCLHGEPT-----------WSYLY---R-KMIPVFAESGARVIA---PDFFGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-------CSCEEEECCCTTC-----------CGGGG---T-TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEeCCCC-------CCCEEEEECCCCC-----------chhhH---H-HHHHHHHhCCCeEEE---eCCCCCCCC
Confidence 677776665421 0368999999641 11112 1 345677888999999 677788887
Q ss_pred CCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC--CC------
Q 004475 572 LPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--KT------ 639 (751)
Q Consensus 572 ~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d--~~------ 639 (751)
.... .......+|+.++++.+. .+++.|+||||||.+|+.+|.++|++++++|+.++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERLD------LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHcC------CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 5432 235677788888877762 35899999999999999999999999999999887542 10
Q ss_pred ----CCccC---cc-----cc-cc---------cch--hhHHHHH-----------------h-c-----------Cccc
Q 004475 640 ----LTPFG---FQ-----TE-FR---------TLW--EATNVYI-----------------E-M-----------SPIT 666 (751)
Q Consensus 640 ----~~~~~---~~-----~~-~~---------~~~--~~~~~~~-----------------~-~-----------~~~~ 666 (751)
..... +. .. .. ... ...+.+. . . ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 00000 00 00 00 000 0000000 0 0 0012
Q ss_pred ccC-CCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 667 HAN-KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 667 ~~~-~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
.+. ++++|+|+++|++|..+| ..++.+.+.+... ....++++++||... . ..+.+.+.+.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~--~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING--CPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc--cceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 345 899999999999999875 5566676666533 222333499999987 4 788999999999975
No 214
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.62 E-value=4.8e-15 Score=146.66 Aligned_cols=196 Identities=14% Similarity=0.102 Sum_probs=125.0
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 590 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 590 (751)
.|.||++||.+. +...| ......|++ .|.|++ ++.+|+|.+.... .......+|+.++++
T Consensus 16 ~~~vvllHG~~~-----------~~~~w----~~~~~~L~~-~~~via---~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFG-----------SLDNL----GVLARDLVN-DHNIIQ---VDVRNHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTC-----------CTTTT----HHHHHHHTT-TSCEEE---ECCTTSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcc-----------cHhHH----HHHHHHHHh-hCcEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 477999999641 11111 123444544 499999 6667888775432 234566777777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC-CCCCCCcc-------------Ccccc--------
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YNKTLTPF-------------GFQTE-------- 648 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~-~d~~~~~~-------------~~~~~-------- 648 (751)
.+ +.+++.++||||||.+|+.+|.++|++++++|+.++. ........ .....
T Consensus 77 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL------QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc------CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 65 2358999999999999999999999999999987532 11100000 00000
Q ss_pred -cccc---------------hhh-HHH----HHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcE
Q 004475 649 -FRTL---------------WEA-TNV----YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 707 (751)
Q Consensus 649 -~~~~---------------~~~-~~~----~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~ 707 (751)
.... |.. ... +........+.++++|+|+++|++|..+| +..++.+.+.+ ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~----~~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQF----PQA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHC----TTE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHC----CCC
Confidence 0000 000 000 00000001245789999999999999988 77776666554 347
Q ss_pred EEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 708 RLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 708 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
+++++++++|... .+..+.+.+.+.+||.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 8999999999875 556788899999999753
No 215
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.62 E-value=1.7e-14 Score=145.75 Aligned_cols=196 Identities=14% Similarity=0.084 Sum_probs=123.7
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHH-HHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 588 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 588 (751)
|+||++||.+... ..+..|. ... ..|+ ++|.|++ ++.+|+|.+.... .......+|+.++
T Consensus 37 ~~vvllHG~~~~~-----------~~~~~~~-~~~~~~l~-~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 100 (289)
T 1u2e_A 37 ETVVLLHGSGPGA-----------TGWANFS-RNIDPLVE-AGYRVIL---LDCPGWGKSDSVVNSGSRSDLNARILKSV 100 (289)
T ss_dssp SEEEEECCCSTTC-----------CHHHHTT-TTHHHHHH-TTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred ceEEEECCCCccc-----------chhHHHH-HhhhHHHh-cCCeEEE---EcCCCCCCCCCCCccccCHHHHHHHHHHH
Confidence 3899999953211 1111121 123 3444 4599999 6667888775432 2344445555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--CCccC---c---------cc-------
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LTPFG---F---------QT------- 647 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~--~~~~~---~---------~~------- 647 (751)
++.+ +.+++.|+||||||.+|+.+|.++|++++++|+.++..... ..... . ..
T Consensus 101 l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (289)
T 1u2e_A 101 VDQL------DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLM 174 (289)
T ss_dssp HHHT------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHh------CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHH
Confidence 5433 34689999999999999999999999999999988754210 00000 0 00
Q ss_pred ------ccc----c----chh----hHHHHH----h--------cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH
Q 004475 648 ------EFR----T----LWE----ATNVYI----E--------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 697 (751)
Q Consensus 648 ------~~~----~----~~~----~~~~~~----~--------~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~ 697 (751)
... . .+. .+..+. . ......+.++++|+|+++|++|..+| +..++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~ 252 (289)
T 1u2e_A 175 MDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLL 252 (289)
T ss_dssp HHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred HHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHH
Confidence 000 0 000 000000 0 01223567789999999999999998 88888777
Q ss_pred HHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 698 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+.+. ..+++++++++|... .+..+.+.+.+.+||.
T Consensus 253 ~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 253 SGIA----GSELHIFRDCGHWAQ-WEHADAFNQLVLNFLA 287 (289)
T ss_dssp HHST----TCEEEEESSCCSCHH-HHTHHHHHHHHHHHHT
T ss_pred hhCC----CcEEEEeCCCCCchh-hcCHHHHHHHHHHHhc
Confidence 6654 358999999999875 4556778888888885
No 216
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.62 E-value=1.7e-13 Score=145.53 Aligned_cols=265 Identities=11% Similarity=0.105 Sum_probs=170.3
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|++|++.+ |+...+........+...+|||||++|+... ..+.|.++++.+++..+.......
T Consensus 112 d~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~ 177 (401)
T 4aez_A 112 ERNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGL----------GNGLVDIYDVESQTKLRTMAGHQA 177 (401)
T ss_dssp TTEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEEC----------CCCeEEEEECcCCeEEEEecCCCC
Confidence 34799999998 8887766444444688999999999998863 346788889888775443332221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..++| +++.|+..+.+ ..|.+++
T Consensus 178 ----~v~~~~~--~~~~l~~~~~d-------------------------------------------------g~i~i~d 202 (401)
T 4aez_A 178 ----RVGCLSW--NRHVLSSGSRS-------------------------------------------------GAIHHHD 202 (401)
T ss_dssp ----CEEEEEE--ETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----ceEEEEE--CCCEEEEEcCC-------------------------------------------------CCEEEEe
Confidence 3667788 56677766432 4677777
Q ss_pred CC-C--CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 164 LD-G--TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 164 ~~-G--~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
+. + ....+..+ ..+..++|+|||++|+....+ ..+.+||+.+++...... .
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~------------~ 257 (401)
T 4aez_A 203 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKT------------N 257 (401)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEEC------------C
T ss_pred cccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEec------------C
Confidence 73 3 33444444 778899999999999886543 368899998754432211 1
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY 318 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~ 318 (751)
....+..++|+|+|.. ++.+.. ....+.|+++++. .+...........+. +.|+|+|+.|+.....
T Consensus 258 ~~~~v~~~~~~p~~~~-ll~~~~---------gs~d~~i~i~d~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSN-LLATGG---------GTMDKQIHFWNAA---TGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp CSSCCCEEEECTTSTT-EEEEEC---------CTTTCEEEEEETT---TCCEEEEEECSSCEEEEEECSSSSEEEEEECT
T ss_pred CcceEEEEEECCCCCC-EEEEec---------CCCCCEEEEEECC---CCCEEEEEeCCCcEEEEEECCCCCeEEEEeec
Confidence 1233568999999998 444321 0123578899885 334433344555677 9999999999886532
Q ss_pred cccceeEEEecCCCCCCcceeee--ecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCcee
Q 004475 319 KTSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 396 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 396 (751)
.. ..|.+.+..++ ....+. ......+.. ++|+|||++|+..+.+ ..|
T Consensus 325 ~d--g~i~v~~~~~~--~~~~~~~~~~h~~~v~~------~~~s~dg~~l~s~~~d---------------------g~i 373 (401)
T 4aez_A 325 PD--NNLSIWSYSSS--GLTKQVDIPAHDTRVLY------SALSPDGRILSTAASD---------------------ENL 373 (401)
T ss_dssp TT--CEEEEEEEETT--EEEEEEEEECCSSCCCE------EEECTTSSEEEEECTT---------------------SEE
T ss_pred CC--CcEEEEecCCc--cceeEEEecCCCCCEEE------EEECCCCCEEEEEeCC---------------------CcE
Confidence 22 35555565553 222221 122222222 7899999998887732 378
Q ss_pred EEEecCCCce
Q 004475 397 DLFDINTGSK 406 (751)
Q Consensus 397 ~~~d~~~g~~ 406 (751)
.+|++.+++.
T Consensus 374 ~iw~~~~~~~ 383 (401)
T 4aez_A 374 KFWRVYDGDH 383 (401)
T ss_dssp EEEECCC---
T ss_pred EEEECCCCcc
Confidence 8999987764
No 217
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.62 E-value=1.7e-14 Score=144.14 Aligned_cols=200 Identities=10% Similarity=0.049 Sum_probs=127.5
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 588 (751)
.|.||++||.+. +...| . .+...|+++||.|++ +|.+|+|.+.... ....+..+|+.++
T Consensus 4 ~~~vvllHG~~~-----------~~~~w---~-~~~~~L~~~g~rVia---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACH-----------GGWSW---Y-KLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTC-----------CGGGG---T-THHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------CcchH---H-HHHHHHHhCCCEEEE---ecCCCCCCCccCcccccCHHHHHHHHHHH
Confidence 378999999641 11112 1 345567789999999 6777888875422 2345556666555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc--------------Cccc-------
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--------------GFQT------- 647 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~--------------~~~~------- 647 (751)
++.+ +. ..++.|+||||||.+|+.+|.++|++++++|++++......... .+..
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 5433 11 25899999999999999999999999999999886421100000 0000
Q ss_pred ---cc-ccchhhHH---------------HH-Hh-cCcc----------ccc---CCCCCCEEEEEcCCCCCCCCChHHH
Q 004475 648 ---EF-RTLWEATN---------------VY-IE-MSPI----------THA---NKIKKPILIIHGEVDDKVGLFPMQA 693 (751)
Q Consensus 648 ---~~-~~~~~~~~---------------~~-~~-~~~~----------~~~---~~~~~P~li~~G~~D~~vp~~~~~~ 693 (751)
.. ........ .+ .. ..+. ..+ ...++|+|+++|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 00 00000000 00 00 0000 001 1136899999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+.+.+.+. ..+++++|++||... .+..+.+.+.+.+|+.+...
T Consensus 219 ~~~~~~~p----~~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 219 RWQIDNIG----VTEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC-
T ss_pred HHHHHhCC----CCeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhcc
Confidence 87777664 348999999999876 56778899999999987543
No 218
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.62 E-value=2.6e-15 Score=149.95 Aligned_cols=194 Identities=15% Similarity=0.150 Sum_probs=125.2
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 589 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v 589 (751)
|.||++||.+. +...|. .....|++ .|.|++ ++.+|+|.+.... ......++|+.+++
T Consensus 17 ~~vvllHG~~~-----------~~~~~~----~~~~~L~~-~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLS-----------DSRTYH----NHIEKFTD-NYHVIT---IDLPGHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTC-----------CGGGGT----TTHHHHHT-TSEEEE---ECCTTSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCC-----------cHHHHH----HHHHHHhh-cCeEEE---ecCCCCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 46999999641 112222 23445554 599999 6677888775432 23556667666666
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc------------------Ccc---c-
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF------------------GFQ---T- 647 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~------------------~~~---~- 647 (751)
+.+ +.+++.++||||||.+|+.+|.++|++++++|+.++......... ... .
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND 151 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHH
Confidence 554 236899999999999999999999999999999987543211000 000 0
Q ss_pred -ccccchh-----h---------------HH----HHHh------cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 648 -EFRTLWE-----A---------------TN----VYIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 648 -~~~~~~~-----~---------------~~----~~~~------~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
.....+. . .. .+.. ......+.++++|+|+++|++|..+| .... ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~~ 228 (269)
T 2xmz_A 152 WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-KM 228 (269)
T ss_dssp HTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-HH
T ss_pred HHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-HH
Confidence 0000000 0 00 0000 01123466789999999999999987 5543 34
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
.+.+ ..++++++++++|... .+....+.+.+.+||.+.
T Consensus 229 ~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 229 ANLI----PNSKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHS----TTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HhhC----CCcEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 4333 4579999999999976 456788999999999864
No 219
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.62 E-value=3e-15 Score=149.41 Aligned_cols=220 Identities=11% Similarity=0.034 Sum_probs=132.9
Q ss_pred ceEEEEEEcCC-CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEE
Q 004475 480 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 557 (751)
Q Consensus 480 ~~e~i~~~~~~-~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v 557 (751)
..+.+++.+.. +..+..++|+|+++++. +++|+|+++||++. +..........+++ .+.+|
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~--~~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~iv 74 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPA--SGYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPVI 74 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCT--TCEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCEE
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCC--CCCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeEE
Confidence 46777787755 56899999999987654 35998877776421 00011122344554 56777
Q ss_pred EEcCCCCCC-------C--CCCCC-------------CCchhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 004475 558 LAGPSIPII-------G--EGDKL-------------PNDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHSYGAFM 614 (751)
Q Consensus 558 ~~~~~~~~~-------g--~g~~~-------------~~~~~~~~~~~d~-~~~v~~l~~~~~id~~~i~l~G~S~GG~~ 614 (751)
+.+++.... + +.... ...........-+ .+++.++.++..+|++|++|+||||||++
T Consensus 75 V~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~ 154 (278)
T 2gzs_A 75 VAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLF 154 (278)
T ss_dssp EEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHH
T ss_pred EEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHH
Confidence 753332110 0 00000 0000111212222 23455565666688889999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCC--------
Q 004475 615 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKV-------- 686 (751)
Q Consensus 615 a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v-------- 686 (751)
|+.++.+ |+.|+++++++|...+.. . . .......... . .....|+++.+|+.|..+
T Consensus 155 a~~~~~~-p~~f~~~~~~s~~~~~~~-------~--~---~~~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 155 VLDSWLS-SSYFRSYYSASPSLGRGY-------D--A---LLSRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp HHHHHHH-CSSCSEEEEESGGGSTTH-------H--H---HHHHHHTSCT--T-TTTTCEEEEEECCC-----------C
T ss_pred HHHHHhC-ccccCeEEEeCcchhcCc-------c--h---HHHHHHHhhc--c-CCCCCcEEEEecCccccccccchhhh
Confidence 9999999 999999999998642110 0 0 0001111111 0 112468999999999763
Q ss_pred CCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 687 GLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 687 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+ ..++++++++|+++|.++++.++|+++|.+... .. +...+.||..
T Consensus 219 ~--~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~---~~-~~~~l~fl~~ 264 (278)
T 2gzs_A 219 V--LSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFN---AS-FRQALLDISG 264 (278)
T ss_dssp H--HHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHH---HH-HHHHHHHHTT
T ss_pred h--HHHHHHHHHHHHcCCCeeEEEEcCCCCccchhH---HH-HHHHHHHHhh
Confidence 4 688999999999999999999999999985422 22 2345667754
No 220
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.62 E-value=2.9e-13 Score=152.13 Aligned_cols=246 Identities=10% Similarity=0.062 Sum_probs=154.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.....+|||||++||+.. ...+.++++++++......+... .+..++|||||++|+..+.+
T Consensus 20 ~~~~~~~spdg~~l~~~~-----------~~~v~l~~~~~~~~~~~~~~h~~----~v~~~~~spdg~~lasg~~d---- 80 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-----------GTSVYTVPVGSLTDTEIYTEHSH----QTTVAKTSPSGYYCASGDVH---- 80 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-----------TTEEEEEETTCSSCCEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred ceeEEeeCCCCCEEEeCC-----------CCEEEEecCCCcccCeEecCCCC----ceEEEEECCCCcEEEEEeCC----
Confidence 356788999999999953 24788889877654443322221 37789999999999987543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecCCC-ceEEeeeeCCCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPSPDQ 186 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt~~-~~~~~~~~SpDG 186 (751)
..|.++|+ +++. ..+..+ ..+..++|||||
T Consensus 81 ---------------------------------------------~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg 115 (611)
T 1nr0_A 81 ---------------------------------------------GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 115 (611)
T ss_dssp ---------------------------------------------SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS
T ss_pred ---------------------------------------------CCEEEeECCCCcceeeEeecccCCceEEEEECCCC
Confidence 46777777 4422 233334 678899999999
Q ss_pred ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
++|+....... ....+++||... ....+ ......+..++|+||++..|+..+
T Consensus 116 ~~l~~~~~~~~---------~~~~v~~wd~~~-~~~~l-------------~gh~~~v~~v~f~p~~~~~l~s~s----- 167 (611)
T 1nr0_A 116 KRIAAVGEGRE---------RFGHVFLFDTGT-SNGNL-------------TGQARAMNSVDFKPSRPFRIISGS----- 167 (611)
T ss_dssp CEEEEEECCSS---------CSEEEEETTTCC-BCBCC-------------CCCSSCEEEEEECSSSSCEEEEEE-----
T ss_pred CEEEEEECCCC---------ceeEEEEeeCCC-Cccee-------------cCCCCCceEEEECCCCCeEEEEEe-----
Confidence 99988764421 023577787432 12222 122234678999999986344433
Q ss_pred CCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeee---
Q 004475 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--- 342 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~--- 342 (751)
..+.+.+++..+ ......+......+. ++|+|||+.|+..+. ...|.+.+..++ .....+..
T Consensus 168 -------~D~~v~lwd~~~--~~~~~~l~~H~~~V~~v~fspdg~~las~s~----D~~i~lwd~~~g-~~~~~~~~~~~ 233 (611)
T 1nr0_A 168 -------DDNTVAIFEGPP--FKFKSTFGEHTKFVHSVRYNPDGSLFASTGG----DGTIVLYNGVDG-TKTGVFEDDSL 233 (611)
T ss_dssp -------TTSCEEEEETTT--BEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTC-CEEEECBCTTS
T ss_pred -------CCCeEEEEECCC--CeEeeeeccccCceEEEEECCCCCEEEEEEC----CCcEEEEECCCC-cEeeeeccccc
Confidence 234677777641 112233444555677 999999998887652 234555666553 11112211
Q ss_pred ---cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 343 ---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 343 ---~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
.....+.. ++|+|||+.|+..+.+ ..|.+||+.+++.....
T Consensus 234 ~~~~h~~~V~~------v~~spdg~~l~s~s~D---------------------~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 234 KNVAHSGSVFG------LTWSPDGTKIASASAD---------------------KTIKIWNVATLKVEKTI 277 (611)
T ss_dssp SSCSSSSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEE------EEECCCCCEEEEEeCC---------------------CeEEEEeCCCCceeeee
Confidence 11122222 7899999999887733 37899999888765443
No 221
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.62 E-value=9.1e-14 Score=148.31 Aligned_cols=259 Identities=10% Similarity=0.108 Sum_probs=152.8
Q ss_pred cceeEEeecCCCCCCCCcc-cccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCC----C-Ceeec
Q 004475 4 FTGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----G-EAKPL 77 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~----g-~~~~l 77 (751)
...|++|++.+ ++.. .+..+.....+...+|||||++||... ....|.++++.+ . ....+
T Consensus 44 d~~v~iw~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~v~vw~~~~~~~~~~~~~~~ 109 (416)
T 2pm9_A 44 DSSLELWSLLA----ADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL----------DNGSLELYSTNEANNAINSMARF 109 (416)
T ss_dssp CCCCEEEESSS----GGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE----------SSSCEEEECCSSTTSCCCEEEEC
T ss_pred CCeEEEEEccC----CCCCcEEEEEecCCceEEEEECCCCCeEEEEc----------cCCeEEEeecccccccccchhhc
Confidence 34699999988 6532 222233444688999999999998863 235677777766 2 23333
Q ss_pred cCCCCccccceeeeeEEecC-CcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhee
Q 004475 78 FESPDICLNAVFGSFVWVNN-STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (751)
Q Consensus 78 t~~~~~~~~~~~~~~~wspD-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (751)
..... .+..++|+|| ++.|+..+.+
T Consensus 110 ~~h~~-----~v~~~~~~~~~~~~l~s~~~d------------------------------------------------- 135 (416)
T 2pm9_A 110 SNHSS-----SVKTVKFNAKQDNVLASGGNN------------------------------------------------- 135 (416)
T ss_dssp CCSSS-----CCCEEEECSSSTTBEEEECSS-------------------------------------------------
T ss_pred cCCcc-----ceEEEEEcCCCCCEEEEEcCC-------------------------------------------------
Confidence 22222 3678999999 7777766332
Q ss_pred eEEEEEcC-CCC------c-eec---CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee
Q 004475 157 AQLVLGSL-DGT------A-KDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (751)
Q Consensus 157 ~~l~~~~~-~G~------~-~~l---t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (751)
..|.++++ +++ . ..+ ..+ ..+..++|+||+..++++... ...+.+||+.+++....
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~ 203 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS------------SNFASIWDLKAKKEVIH 203 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS------------SSCEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC------------CCCEEEEECCCCCcceE
Confidence 35677777 443 1 111 223 667899999995444444322 34689999987654433
Q ss_pred ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-eeceeEE-
Q 004475 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS- 302 (751)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~- 302 (751)
....... ......+..++|+|+|..+++... .++ ....|+++++... ......+. .....+.
T Consensus 204 ~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~-~d~--------~~~~i~~~d~~~~-~~~~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 204 LSYTSPN------SGIKQQLSVVEWHPKNSTRVATAT-GSD--------NDPSILIWDLRNA-NTPLQTLNQGHQKGILS 267 (416)
T ss_dssp ECCCCCS------SCCCCCEEEEEECSSCTTEEEEEE-CCS--------SSCCCCEEETTST-TSCSBCCCSCCSSCEEE
T ss_pred Eeccccc------cccCCceEEEEECCCCCCEEEEEE-CCC--------CCceEEEEeCCCC-CCCcEEeecCccCceeE
Confidence 2221100 001234668999999977344433 111 1126888887521 12233343 4556677
Q ss_pred EEEec-CCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCC-CEEEEee
Q 004475 303 VSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG-TNVIAKI 370 (751)
Q Consensus 303 ~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG-~~l~~~~ 370 (751)
+.|+| +++.|+.... ...|.+.++.++ +...........+.. ++|+||| +.|+..+
T Consensus 268 ~~~s~~~~~~l~s~~~----dg~v~~wd~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGR----DNTVLLWNPESA--EQLSQFPARGNWCFK------TKFAPEAPDLFACAS 325 (416)
T ss_dssp EEECSSCSSCEEEEES----SSEEEEECSSSC--CEEEEEECSSSCCCC------EEECTTCTTEEEECC
T ss_pred EEeCCCCCCeEEEEeC----CCCEEEeeCCCC--ccceeecCCCCceEE------EEECCCCCCEEEEEe
Confidence 99999 8888877652 246777788774 222222222222333 8899999 6666655
No 222
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.62 E-value=1.9e-13 Score=146.07 Aligned_cols=320 Identities=8% Similarity=-0.030 Sum_probs=187.5
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|++|++.+ ++..... ..........|+|||++||... ....|.++++.+++..........
T Consensus 77 d~~v~i~d~~~----~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~h~~ 140 (420)
T 3vl1_A 77 DGHDFLFNTII----RDGSKML--KRADYTAVDTAKLQMRRFILGT----------TEGDIKVLDSNFNLQREIDQAHVS 140 (420)
T ss_dssp TTEEEEEECCS----EETTTTS--CSCCEEEEEEECSSSCEEEEEE----------TTSCEEEECTTSCEEEEETTSSSS
T ss_pred CCcEEEEEecc----cceeeEE--ecCCceEEEEEecCCCEEEEEE----------CCCCEEEEeCCCcceeeecccccC
Confidence 34789999987 6655443 2223355668999999999863 346788889888876665433221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..++|+|||+.|+..+.+ ..|.++|
T Consensus 141 ----~v~~~~~~~~~~~l~s~s~d-------------------------------------------------~~i~iwd 167 (420)
T 3vl1_A 141 ----EITKLKFFPSGEALISSSQD-------------------------------------------------MQLKIWS 167 (420)
T ss_dssp ----CEEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----ccEEEEECCCCCEEEEEeCC-------------------------------------------------CeEEEEe
Confidence 47889999999988877442 4788888
Q ss_pred C-CC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccC-CCCCCCC-----
Q 004475 164 L-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL-PPAEDIP----- 234 (751)
Q Consensus 164 ~-~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-~~~~~~~----- 234 (751)
+ ++ ....+..+ ..+..++|+|||+.|+..+.+ ..+.+||+.+++....... .......
T Consensus 168 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 168 VKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD-------------GTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp TTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT-------------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred CCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC-------------CcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 8 56 45556555 778899999999999876543 3588999986654433221 1100000
Q ss_pred ------CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-eceeEE-EEEe
Q 004475 235 ------VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFS-VSWC 306 (751)
Q Consensus 235 ------~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~-~~~s 306 (751)
.........+..++|+|||+. |+... ..+.|.++++.. +.....+.. ....+. +.|+
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~------------~dg~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~ 299 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGH------------VSGVITVHNVFS--KEQTIQLPSKFTCSCNSLTVD 299 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEE------------TTSCEEEEETTT--CCEEEEECCTTSSCEEEEEEC
T ss_pred ecCCcceeeecccCcccceEEcCCCCE-EEEEc------------CCCeEEEEECCC--CceeEEcccccCCCceeEEEe
Confidence 000111234567899999997 55543 235788888751 222222222 344566 9999
Q ss_pred cCCc-eEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccC
Q 004475 307 DDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 385 (751)
Q Consensus 307 pdg~-~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~ 385 (751)
|+++ .|+.+. ....|.+.++.++......+.......+. ..+++||+.|+..+.+
T Consensus 300 ~~~~~~l~~g~----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-------~~~~~~~~~l~s~~~d------------- 355 (420)
T 3vl1_A 300 GNNANYIYAGY----ENGMLAQWDLRSPECPVGEFLINEGTPIN-------NVYFAAGALFVSSGFD------------- 355 (420)
T ss_dssp SSCTTEEEEEE----TTSEEEEEETTCTTSCSEEEEESTTSCEE-------EEEEETTEEEEEETTT-------------
T ss_pred CCCCCEEEEEe----CCCeEEEEEcCCCcCchhhhhccCCCCce-------EEEeCCCCEEEEecCC-------------
Confidence 9999 565544 22467777877642212333322222222 3366788877666522
Q ss_pred CCCCCCCCceeEEEecCCCce-eEEeeccchhhhhceeeeecCCcceeeccCCC---EEEEEEecCCCCCeEEEEEcC
Q 004475 386 GFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQL---KILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 386 ~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~~~~~~~~~~~~l~~~~~~ 459 (751)
..|.+|++.+.+. ..+...... ............++|+||++ .++..... +.+.+++++
T Consensus 356 --------~~v~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~----g~~~~~~~~ 418 (420)
T 3vl1_A 356 --------TSIKLDIISDPESERPAIEFETP---TFLVSNDDAVSQFCYVSDDESNGEVLEVGKN----NFCALYNLS 418 (420)
T ss_dssp --------EEEEEEEECCTTCCSCEECTTSC---EEECCSSCCCCEEEEECCSSSSCEEEEEETT----TEEEEEESC
T ss_pred --------ccEEEEeccCCCCCccceeccCc---cEEccCCcceEEEEEccCCCCcceEEEEcCC----ceEEEEecc
Confidence 3678888765322 112111110 00011111223478999999 77766532 345555543
No 223
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.62 E-value=1.3e-13 Score=142.94 Aligned_cols=293 Identities=13% Similarity=0.133 Sum_probs=164.7
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCee--e-ccCCCCccccceeeeeEEecCCcEEEEeecCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--P-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~--~-lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 108 (751)
.+...+|||||++||..+ ....|.++++++++.. . +..+.. ..+..++|||||++|+..+.+
T Consensus 18 ~v~~l~~sp~g~~las~~----------~D~~i~iw~~~~~~~~~~~~~~~~h~----~~v~~~~~sp~g~~l~s~s~D- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG----------GDRRIRIWGTEGDSWICKSVLSEGHQ----RTVRKVAWSPCGNYLASASFD- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEE----------TTSCEEEEEEETTEEEEEEEECSSCS----SCEEEEEECTTSSEEEEEETT-
T ss_pred cEEEEEECCCCCEEEEEc----------CCCeEEEEEcCCCcceeeeeeccccC----CcEEEEEECCCCCEEEEEECC-
Confidence 467899999999999864 2345666676666422 1 212221 147889999999999987543
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC---ceecCCC-ceEEeeeeC
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPS 183 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~---~~~lt~~-~~~~~~~~S 183 (751)
..+.++++ .+. ...+..+ ..+..++|+
T Consensus 83 ------------------------------------------------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 83 ------------------------------------------------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp ------------------------------------------------SCEEEEEECCC-EEEEEEECCCSSCEEEEEEC
T ss_pred ------------------------------------------------CcEEEEEccCCCeEEEEEccCCCCCceEEEEe
Confidence 23444444 232 3344444 678899999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~ 262 (751)
|||++|+..+.+ ..+.+||++++.. ..+.. +......+..+.|+|||+. |+..+
T Consensus 115 p~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~----------~~~h~~~v~~~~~~p~~~~-l~s~s- 169 (345)
T 3fm0_A 115 PSGNLLATCSRD-------------KSVWVWEVDEEDEYECVSV----------LNSHTQDVKHVVWHPSQEL-LASAS- 169 (345)
T ss_dssp TTSSEEEEEETT-------------SCEEEEEECTTSCEEEEEE----------ECCCCSCEEEEEECSSSSC-EEEEE-
T ss_pred CCCCEEEEEECC-------------CeEEEEECCCCCCeEEEEE----------ecCcCCCeEEEEECCCCCE-EEEEe-
Confidence 999998876544 3588999875432 11111 1112233568999999998 55544
Q ss_pred ccCCCCccccCcccceeeccCCCCCCCCc---eEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcc-
Q 004475 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP- 337 (751)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~- 337 (751)
..+.+.+++.. .... ..+......+. ++|+|||+.|+..+. .+.-.||.....+.....
T Consensus 170 -----------~d~~i~~w~~~---~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~--D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 170 -----------YDDTVKLYREE---EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD--DRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp -----------TTSCEEEEEEE---TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEEECTTCTTCCC
T ss_pred -----------CCCcEEEEEec---CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC--CCeEEEeccccCCCCccce
Confidence 23467777664 2221 22334455667 999999999887662 344567765433210000
Q ss_pred --------eeeee---cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce
Q 004475 338 --------RVLFD---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK 406 (751)
Q Consensus 338 --------~~l~~---~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 406 (751)
+.+.. .....++. ++|+|++..|+..+.+ ..+.+|+..++..
T Consensus 234 ~~~~~~~~~~~~~~~~~h~~~v~~------v~~~~~~~~l~s~~~d---------------------~~i~vw~~~~~~~ 286 (345)
T 3fm0_A 234 CSGSDPSWKCICTLSGFHSRTIYD------IAWCQLTGALATACGD---------------------DAIRVFQEDPNSD 286 (345)
T ss_dssp CC---CEEEEEEEECSSCSSCEEE------EEECTTTCCEEEEETT---------------------SCEEEEEECTTSC
T ss_pred eeccCCccceeEEecCCCCCcEEE------EEEecCCCEEEEEeCC---------------------CeEEEEEeCCCCC
Confidence 00100 01111222 7899999998887732 2566666654321
Q ss_pred --eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCc
Q 004475 407 --ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 462 (751)
Q Consensus 407 --~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~ 462 (751)
......... . ...-......++|+|++..++.+.... +.+.++++.+++
T Consensus 287 ~~~~~~~~~~~-~---~~~h~~~V~~v~~~p~~~~~laS~s~D---g~v~~W~~~~~~ 337 (345)
T 3fm0_A 287 PQQPTFSLTAH-L---HQAHSQDVNCVAWNPKEPGLLASCSDD---GEVAFWKYQRPE 337 (345)
T ss_dssp TTSCCEEEEEE-E---TTSSSSCEEEEEECSSSTTEEEEEETT---SCEEEEEECC--
T ss_pred cceeeEEEEee-e---cccccCcEeEeEEeCCCceEEEEcCCC---CcEEEEEecCCC
Confidence 000000000 0 000011122368999987666665443 347777776544
No 224
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.62 E-value=1.3e-13 Score=144.18 Aligned_cols=205 Identities=11% Similarity=0.105 Sum_probs=121.7
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~ 254 (751)
..+..++|||||++|++.+... ...|.+||+.+++......+. ..+..++|||||+
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~-----------d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~ 189 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKV-----------PAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGK 189 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCS-----------SCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSS
T ss_pred cCEEEEEEcCCCCEEEEEECCC-----------CCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCc
Confidence 3456789999999998865432 356889999887654332221 2356899999999
Q ss_pred ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecCC
Q 004475 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPG 331 (751)
Q Consensus 255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 331 (751)
. ++..+ .+.+.+++... +....... .....+. +.|+|||+.++..+........++..+..
T Consensus 190 ~-l~s~s-------------~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 190 V-VAYIT-------------GSSLEVISTVT--GSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp E-EEEEC-------------SSCEEEEETTT--CCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred e-EEecc-------------ceeEEEEEecc--CcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 8 55543 12344554421 22221111 2344566 89999999998776443333456666665
Q ss_pred CCCCcceee--eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 332 SKDVAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 332 ~~~~~~~~l--~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
......... .......+.. ++|||||++|+..+.+ ..|++||+.+++....
T Consensus 254 ~~~~~~~~~~~~~~~~~~V~~------~~~Spdg~~lasgs~D---------------------~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRFKGITS------MDVDMKGELAVLASND---------------------NSIALVKLKDLSMSKI 306 (365)
T ss_dssp TTEEEEEEEEEEESSCSCEEE------EEECTTSCEEEEEETT---------------------SCEEEEETTTTEEEEE
T ss_pred cceecceeeeeecCCCCCeEe------EEECCCCCceEEEcCC---------------------CEEEEEECCCCcEEEE
Confidence 531111111 1112222222 7899999999988833 2689999998876443
Q ss_pred eeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 410 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
+..... ..+.. ++|||||+.|+-. +.. ..|.++++..
T Consensus 307 ~~~gH~---~~V~~-------v~fSpdg~~laS~-S~D---~tvrvw~ip~ 343 (365)
T 4h5i_A 307 FKQAHS---FAITE-------VTISPDSTYVASV-SAA---NTIHIIKLPL 343 (365)
T ss_dssp ETTSSS---SCEEE-------EEECTTSCEEEEE-ETT---SEEEEEECCT
T ss_pred ecCccc---CCEEE-------EEECCCCCEEEEE-eCC---CeEEEEEcCC
Confidence 211110 01222 5899999977643 332 3477777654
No 225
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.61 E-value=3.3e-13 Score=142.73 Aligned_cols=248 Identities=12% Similarity=0.101 Sum_probs=149.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCCCc-------------cccceeeeeEEecC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDI-------------CLNAVFGSFVWVNN 97 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~~~-------------~~~~~~~~~~wspD 97 (751)
.+...+|||||++||... + ..+.++++.+|+... +...... .....+..++||||
T Consensus 66 ~V~~v~fspdg~~la~g~---------~--~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC---------N--KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp CCCEEEECTTSSEEEEEC---------B--SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred EEEEEEECCCCCEEEEEc---------C--CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 578899999999999842 2 356666777776433 2211100 00012568899999
Q ss_pred CcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCC-
Q 004475 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP- 174 (751)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~- 174 (751)
|++|+..+.+ ..|.++|+ +++. ..+..+
T Consensus 135 g~~l~s~~~d-------------------------------------------------~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGAED-------------------------------------------------RLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEETT-------------------------------------------------SCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEcCC-------------------------------------------------CeEEEEECCCCcEEEEEccCC
Confidence 9999887542 46777888 5543 344444
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec-CC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DK 253 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG 253 (751)
..+..++|+|||++|+..+.+ ..+.+||+.+++....... ...+..++|+| ||
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~-------------~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSI-------------EDGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEEC-------------SSCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCC-------------CcEEEEECCCCeeEEEEEc-------------CCCcEEEEEECCCC
Confidence 778899999999998776543 3688999987764432221 12355789999 78
Q ss_pred CceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe-------EeeceeEE-EEEecCCceEEEeeeecccceeE
Q 004475 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-------HKLDLRFS-VSWCDDSLALVNETWYKTSQTRT 325 (751)
Q Consensus 254 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-------~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l 325 (751)
+. |+..+ ..+.|.++++.. +.....+ ......+. +.|+|||+.|+..+. . ..|
T Consensus 220 ~~-l~~~s------------~d~~v~iwd~~~--~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--d--~~v 280 (393)
T 1erj_A 220 KY-IAAGS------------LDRAVRVWDSET--GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--D--RSV 280 (393)
T ss_dssp CE-EEEEE------------TTSCEEEEETTT--CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--T--SEE
T ss_pred CE-EEEEc------------CCCcEEEEECCC--CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC--C--CEE
Confidence 76 55543 235677777741 1112222 12344566 999999998876552 2 344
Q ss_pred EEecCCCCCC----------cceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCce
Q 004475 326 WLVCPGSKDV----------APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPF 395 (751)
Q Consensus 326 ~~~~~~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (751)
.+.++.+... ............+.. ++|+|||++|+..+.+ ..
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~~~~~~l~sgs~D---------------------~~ 333 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYILSGSKD---------------------RG 333 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEE------EEECGGGCEEEEEETT---------------------SE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEE------EEECCCCCEEEEEeCC---------------------Ce
Confidence 4455443200 000111111111222 7799999998877732 27
Q ss_pred eEEEecCCCceeEEee
Q 004475 396 LDLFDINTGSKERIWE 411 (751)
Q Consensus 396 l~~~d~~~g~~~~l~~ 411 (751)
|++||+.+++......
T Consensus 334 v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEEC
Confidence 8899999887655443
No 226
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.61 E-value=8.6e-14 Score=159.33 Aligned_cols=263 Identities=11% Similarity=0.043 Sum_probs=160.7
Q ss_pred cccceeec-CCCCeEEEEEeecccccccCCceeEEEEEcCCC-CeeeccCCCCccccceeeeeEEecCCcEEEEeecCCC
Q 004475 32 KINFVSWS-PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~S-PDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g-~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
....++|| |||++|||+.... +....+||++++++| +. ++.. +......++|||||+.|+|++.+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~-----G~~~~~l~v~dl~~g~~~--l~~~----~~~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS-----GNEVYTIEFKRISDPSQT--IADK----VSGTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS-----SSSCEEEEEEETTCTTCC--CCCC----EEEECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCC-----CCceEEEEEEECCCCCEe--CCcc----ccCceeeEEEecCCCEEEEEEECCC
Confidence 35789999 9999999987531 133467999999998 62 2211 1112357899999999999965321
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc--eec---CCCceEEeeeeC
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--KDF---GTPAVYTAVEPS 183 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~--~~l---t~~~~~~~~~~S 183 (751)
. ...+||++++ +++. +.+ ........+.||
T Consensus 244 ~--------------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 244 L--------------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp C--------------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred C--------------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 0 1158999999 4432 333 222445688999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCc--ee--eeeccCCCCCCCCCccCCccCCCceeeeecC---CCce
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LV--RELCDLPPAEDIPVCYNSVREGMRSISWRAD---KPST 256 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spd---G~~~ 256 (751)
|||++|++.+... ...+||++|++++ +. +.+.... ....|+|+ |+.
T Consensus 280 pDg~~l~~~~~~~----------~~~~l~~~d~~~~~~~~~~~~l~~~~----------------~~~~~s~~~~~g~~- 332 (751)
T 2xe4_A 280 ADTNTLCIGSQSP----------ETAEVHLLDLRKGNAHNTLEIVRPRE----------------KGVRYDVQMHGTSH- 332 (751)
T ss_dssp TTSSEEEEEEECS----------SCEEEEEEESSSCTTCCCEEESSCCC----------------TTCCEEEEEETTTE-
T ss_pred CCCCEEEEEecCC----------CCceEEEEECCCCCCCceeEEeecCC----------------CCceEEEeeeeCCE-
Confidence 9999999987542 1568999999865 33 4443221 12356666 888
Q ss_pred EEEEEeccCCCCccccCcccceeeccCCCCCCCCceE-eEeeceeEE-EEEecCCceEEEeeeecccceeEEEecC----
Q 004475 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCP---- 330 (751)
Q Consensus 257 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~---- 330 (751)
|++.+..+ ...+.+|++++++. ++..+. +........ ..|+++++.|++.... ....+|+++++
T Consensus 333 l~~~t~~~-------~a~~~~L~~~d~~~--~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~-~g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 333 LVILTNEG-------GAVNHKLLIAPRGQ--PSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR-AGLTRIWTMMADSQD 402 (751)
T ss_dssp EEEEECTT-------TCTTCEEEEEETTS--TTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCTTT
T ss_pred EEEEeCCC-------CCCCcEEEEEcCCC--cccceeeEECCCCCcEEEEEEEECCEEEEEEEe-CCEEEEEEEeccccc
Confidence 67765322 01335899998851 133344 443333334 4566678888887754 34578999986
Q ss_pred ---CCCCCc-ceeeeecccccccCCCCCCCeee----CCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475 331 ---GSKDVA-PRVLFDRVFENVYSDPGSPMMTR----TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 402 (751)
Q Consensus 331 ---~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~----spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 402 (751)
+++ . .+.+.......... +.+ ++|++.|+|.... ......++++|+.
T Consensus 403 ~~~~~g--~~~~~l~l~~~~~~~~------~~~~~~~~~~~~~l~~~~ss-----------------~~~P~~~~~~d~~ 457 (751)
T 2xe4_A 403 GVFKAG--TGLREVVMEEPIFTVH------LVESQMLEYEEPTFRMEYSS-----------------LATPNTWFDVSPQ 457 (751)
T ss_dssp SCCCTT--TCCEECCCCCSSCEEE------ECGGGCCCTTCSCEEEEEEE-----------------TTEEEEEEEECTT
T ss_pred ccccCC--ccceEECCCCceeEEE------eccCcccCCCCCEEEEEEeC-----------------CCCCCEEEEEECC
Confidence 442 3 34442111110001 222 5688877776632 1234478899998
Q ss_pred CCceeEEee
Q 004475 403 TGSKERIWE 411 (751)
Q Consensus 403 ~g~~~~l~~ 411 (751)
+++.+.+..
T Consensus 458 ~~~~~~l~~ 466 (751)
T 2xe4_A 458 DHSRTAVKV 466 (751)
T ss_dssp TCCEEEEEE
T ss_pred CCcEEEEec
Confidence 888776654
No 227
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.61 E-value=5.5e-15 Score=154.19 Aligned_cols=180 Identities=17% Similarity=0.101 Sum_probs=117.6
Q ss_pred hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004475 545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPND---------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 615 (751)
Q Consensus 545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a 615 (751)
.+...|+++||.|++ .+.+|+|.+.... ......++|+.+++++++++ .+..+++++||||||.+|
T Consensus 84 ~~~~~l~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a 158 (354)
T 2rau_A 84 SIVLYLARNGFNVYT---IDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAA 158 (354)
T ss_dssp CHHHHHHHTTEEEEE---EECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHH
T ss_pred hHHHHHHhCCCEEEE---ecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHH
Confidence 346678889999999 5556676654321 22467788999999999876 244789999999999999
Q ss_pred HHHHHhC-CCceeEEEEccCCCCC--CCCcc-----------------------Ccc---------c----------ccc
Q 004475 616 AHLLAHA-PHLFCCGIARSGSYNK--TLTPF-----------------------GFQ---------T----------EFR 650 (751)
Q Consensus 616 ~~~a~~~-p~~~~~~v~~~~~~d~--~~~~~-----------------------~~~---------~----------~~~ 650 (751)
+.++.++ |++++++|+.++.... ....+ .+. . ...
T Consensus 159 ~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (354)
T 2rau_A 159 LNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSI 238 (354)
T ss_dssp HHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSH
T ss_pred HHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhH
Confidence 9999998 9999999998653211 00000 000 0 000
Q ss_pred cchhhHHHH----------------------------------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 651 TLWEATNVY----------------------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 651 ~~~~~~~~~----------------------------------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
..|-....+ ...+....+.++++|+|++||++|.++| ..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~~-- 313 (354)
T 2rau_A 239 SDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDSK-- 313 (354)
T ss_dssp HHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCGG--
T ss_pred HHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cchh--
Confidence 000000000 0112233456889999999999998764 2221
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCc--cccHHHHHHHHHHHHHHH
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQKY 739 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 739 (751)
.+ ...++++++++++|.... .+...++.+.+.+||+++
T Consensus 314 --~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 314 --IL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp --GS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred --hh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 12 245699999999998643 234578899999999864
No 228
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.61 E-value=2.4e-14 Score=146.49 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=78.9
Q ss_pred EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC
Q 004475 484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 563 (751)
Q Consensus 484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~ 563 (751)
..+...+|..+....+-+++ .|.||++||++... .. ......+..+||.|++ +
T Consensus 14 ~~~~~~~g~~l~y~~~G~~~--------g~pvvllHG~~~~~-------------~~---~~~~~~~~~~~~~vi~---~ 66 (313)
T 1azw_A 14 GSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGGG-------------CN---DKMRRFHDPAKYRIVL---F 66 (313)
T ss_dssp EEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTTC-------------CC---GGGGGGSCTTTEEEEE---E
T ss_pred ceEEcCCCCEEEEEecCCCC--------CCeEEEECCCCCcc-------------cc---HHHHHhcCcCcceEEE---E
Confidence 33444467777666554321 35689999964110 00 0111122357999999 6
Q ss_pred CCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 564 PIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 564 ~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
|.+|+|.+.... .......+|+.++++.+ ..+++.|+||||||.+|+.+|.++|++++++|+.++.
T Consensus 67 D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 67 DQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp CCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 677888875421 23455666666665544 2358999999999999999999999999999998764
No 229
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.61 E-value=8.4e-14 Score=143.81 Aligned_cols=275 Identities=11% Similarity=0.064 Sum_probs=166.1
Q ss_pred CCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 59 ~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.....|+++|+.+++........... .....++|||||+.|++....
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~------------------------------- 54 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVNK------------------------------- 54 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEETT-------------------------------
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeCC-------------------------------
Confidence 34578999999988765443322200 014678999999988877421
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-CCCce-ecCCCc------eEEeeeeCCCCceEEEEEecCCcccccccCC---C
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCAR---F 207 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt~~~------~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~---~ 207 (751)
...|+++|+ +|+.. .+.... ....++|||||++|++........ ... .
T Consensus 55 -----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----~~~~~~~ 113 (337)
T 1pby_B 55 -----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE----LTHFEVQ 113 (337)
T ss_dssp -----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC----SSCEEEC
T ss_pred -----------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc----ccccccc
Confidence 147888998 66543 333222 455789999999999875321000 000 1
Q ss_pred ceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC
Q 004475 208 SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE 287 (751)
Q Consensus 208 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (751)
...|++||+++++........ ..+..+.|+|||++ |++++ +.|++++++
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~--------------~~i~~~d~~--- 162 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAP-------------RQITMLAWARDGSK-LYGLG--------------RDLHVMDPE--- 162 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSC-EEEES--------------SSEEEEETT---
T ss_pred CceEEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCE-EEEeC--------------CeEEEEECC---
Confidence 357999999877654332211 12447899999998 66642 468888875
Q ss_pred CCCceEeEeeceeEE-EEEecCCceEEEeeeecc--------------------cceeEEEecCCCCCCcceeeeecccc
Q 004475 288 GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT--------------------SQTRTWLVCPGSKDVAPRVLFDRVFE 346 (751)
Q Consensus 288 ~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~--------------------~~~~l~~~~~~~~~~~~~~l~~~~~~ 346 (751)
++............. ..|+|||+.|++...... ....|+++++.++ +...+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~ 240 (337)
T 1pby_B 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG--EMAMREVRIMD 240 (337)
T ss_dssp TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC--CEEEEEEEECS
T ss_pred CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC--CceEeecCCCC
Confidence 332222222111112 578999998765542111 0115788898875 22222111111
Q ss_pred -cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeee
Q 004475 347 -NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 425 (751)
Q Consensus 347 -~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 425 (751)
... .++|+|||++|++.. ..|++||+++++.........
T Consensus 241 ~~~~------~~~~s~dg~~l~~~~-----------------------~~v~~~d~~~~~~~~~~~~~~----------- 280 (337)
T 1pby_B 241 VFYF------STAVNPAKTRAFGAY-----------------------NVLESFDLEKNASIKRVPLPH----------- 280 (337)
T ss_dssp SCEE------EEEECTTSSEEEEEE-----------------------SEEEEEETTTTEEEEEEECSS-----------
T ss_pred Ccee------eEEECCCCCEEEEeC-----------------------CeEEEEECCCCcCcceecCCC-----------
Confidence 111 178999999887762 168999998887654433221
Q ss_pred cCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 426 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 426 ~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
....++|+|||+.|++. . ....|.++|+.+++...
T Consensus 281 -~~~~~~~s~dg~~l~~~-~---~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 281 -SYYSVNVSTDGSTVWLG-G---ALGDLAAYDAETLEKKG 315 (337)
T ss_dssp -CCCEEEECTTSCEEEEE-S---BSSEEEEEETTTCCEEE
T ss_pred -ceeeEEECCCCCEEEEE-c---CCCcEEEEECcCCcEEE
Confidence 12346899999988775 2 24679999999887554
No 230
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.61 E-value=2.2e-14 Score=145.38 Aligned_cols=208 Identities=12% Similarity=0.050 Sum_probs=133.8
Q ss_pred ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC
Q 004475 492 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 571 (751)
Q Consensus 492 ~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~ 571 (751)
..+.+...-|.+ ..|.||++||.+. +...|. .+...|+++||.|++ +|.+|+|.+
T Consensus 33 ~~l~y~~~G~~~-------~g~~vvllHG~~~-----------~~~~w~----~~~~~L~~~g~rvia---~Dl~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-------AEHTFLCLHGEPS-----------WSFLYR----KMLPVFTAAGGRVVA---PDLFGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-------CSCEEEEECCTTC-----------CGGGGT----TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEccCCC-------CCCeEEEECCCCC-----------cceeHH----HHHHHHHhCCcEEEE---eCCCCCCCC
Confidence 677777665421 0367999999641 111221 345677888999999 677788887
Q ss_pred CCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-ccC--
Q 004475 572 LPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFG-- 644 (751)
Q Consensus 572 ~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~-~~~-- 644 (751)
.... .......+|+.++++.+. .+++.|+||||||.+|+.+|.++|++++++|+.++....... ...
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDALQ------LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHhC------CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 5432 235667777777777662 368999999999999999999999999999998875421110 000
Q ss_pred -cc---c-cc----------c-cch--hhHHHHH----------------hcC--------------cccccC-CCCCCE
Q 004475 645 -FQ---T-EF----------R-TLW--EATNVYI----------------EMS--------------PITHAN-KIKKPI 675 (751)
Q Consensus 645 -~~---~-~~----------~-~~~--~~~~~~~----------------~~~--------------~~~~~~-~~~~P~ 675 (751)
+. . .. . ... ...+.+. ... ....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 00 0 00 0 000 0000000 000 011345 889999
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 676 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 676 li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
|+++|++|..+| ..++++.+.+... ......++++||... . ..+.+.+.+.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999875 5566777666543 333444789999987 4 67888899999974
No 231
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.61 E-value=6.7e-15 Score=149.19 Aligned_cols=216 Identities=13% Similarity=0.119 Sum_probs=133.5
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|.++..... + . .|.||++||.+.+. .....|. .....|+ ++|.|++ ++.+|+
T Consensus 23 ~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~-----------~~~~~~~-~~~~~L~-~~~~vi~---~Dl~G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----K--GQPVILIHGGGAGA-----------ESEGNWR-NVIPILA-RHYRVIA---MDMLGF 76 (296)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCSTTC-----------CHHHHHT-TTHHHHT-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCc-----------chHHHHH-HHHHHHh-hcCEEEE---ECCCCC
Confidence 36666665443 1 1 36799999964211 0111111 1233444 4599999 666788
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc----
Q 004475 569 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---- 642 (751)
Q Consensus 569 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~---- 642 (751)
|.+... ........+|+.+.++.+ . + ..++.|+||||||.+|+.+|.++|++++++|++++........
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 151 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 151 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHH
Confidence 877521 123455566665555443 2 2 1589999999999999999999999999999988754211000
Q ss_pred --cCccc--------------ccc--------cchhh---H---HHHHh-----------cCcccccCCCCCCEEEEEcC
Q 004475 643 --FGFQT--------------EFR--------TLWEA---T---NVYIE-----------MSPITHANKIKKPILIIHGE 681 (751)
Q Consensus 643 --~~~~~--------------~~~--------~~~~~---~---~~~~~-----------~~~~~~~~~~~~P~li~~G~ 681 (751)
+.... ... ..+.. + ..+.. ......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp ----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 00000 000 00000 0 00000 01122457889999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcC
Q 004475 682 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 682 ~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 742 (751)
+|..+| +..+..+.+.+. ..+++++++++|... .+..+.+.+.+.+||.+.+.+
T Consensus 232 ~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~ 285 (296)
T 1j1i_A 232 DDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVDI 285 (296)
T ss_dssp TCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC---
T ss_pred CCcccC--HHHHHHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCCc
Confidence 999998 888877776553 468999999999876 566788999999999988753
No 232
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=2.9e-13 Score=140.09 Aligned_cols=289 Identities=9% Similarity=0.005 Sum_probs=155.5
Q ss_pred ceeEEEEEcC-CCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhh
Q 004475 61 KLRVWIADAE-TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (751)
Q Consensus 61 ~~~l~i~~~~-~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (751)
...|++++++ +++.+.+..... ...+..++|||||++|++.....
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~------------------------------- 59 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPE------------------------------- 59 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEC---SSCCCCEEECTTSSEEEEEETTT-------------------------------
T ss_pred CCeEEEEEECCCCcEEEeeeEec---CCCCceEEECCCCCEEEEeecCC-------------------------------
Confidence 3567777764 444333321111 01256789999999998874421
Q ss_pred hccCCccchhhhhhheeeEEEEEcC-CCCceec---CCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEe
Q 004475 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF---GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (751)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~l---t~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (751)
..-.+|.++. +|+.+.+ ........++|+|||++|++.... ...+++|+
T Consensus 60 ---------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~i~~~d 112 (343)
T 1ri6_A 60 ---------------FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------------AGNVSVTR 112 (343)
T ss_dssp ---------------TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------------TTEEEEEE
T ss_pred ---------------CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------------CCeEEEEE
Confidence 0024455554 4544333 222456688999999999887543 23578888
Q ss_pred CCCce-eeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe
Q 004475 216 TDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (751)
Q Consensus 216 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (751)
++.+. .+.+..... ...+..++|+|||+. ++.+.. ..+.|++++++. .+....+
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~s~dg~~-l~~~~~-----------~~~~v~~~d~~~--~~~~~~~ 167 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEG-----------LDGCHSANISPDNRT-LWVPAL-----------KQDRICLFTVSD--DGHLVAQ 167 (343)
T ss_dssp EETTEEEEEEEEECC-----------CTTBCCCEECTTSSE-EEEEEG-----------GGTEEEEEEECT--TSCEEEE
T ss_pred CCCCccccccccccC-----------CCCceEEEECCCCCE-EEEecC-----------CCCEEEEEEecC--CCceeee
Confidence 73221 111111111 122457899999998 555431 125788888751 1333222
Q ss_pred E-----e-eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-cccccC-CCCCCCeeeCCCCCE
Q 004475 295 H-----K-LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYS-DPGSPMMTRTSTGTN 365 (751)
Q Consensus 295 ~-----~-~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~spDG~~ 365 (751)
. . ...... +.|+|||++|++.... ...|.+++++...+..+.+.... ...... ......++|+|||++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 168 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred cccccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 1 1 122344 8899999988776522 23555555533112222221111 000000 000012789999998
Q ss_pred EEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC--CCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEE
Q 004475 366 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN--TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 366 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
|++... ....|.+|++. +++.+.+..... ......++|+|||+.|++.
T Consensus 245 l~v~~~--------------------~~~~i~v~d~~~~~~~~~~~~~~~~----------~~~~~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 245 LYACDR--------------------TASLITVFSVSEDGSVLSKEGFQPT----------ETQPRGFNVDHSGKYLIAA 294 (343)
T ss_dssp EEEEET--------------------TTTEEEEEEECTTSCCEEEEEEEEC----------SSSCCCEEECTTSSEEEEE
T ss_pred EEEEec--------------------CCCEEEEEEEcCCCCceEEeeeecC----------CCccceEEECCCCCEEEEe
Confidence 876651 12367788876 554444422211 0113347899999988776
Q ss_pred EecCCCCCeEEEEEcCCCceeEeecC
Q 004475 444 KESKTEITQYHILSWPLKKSSQITNF 469 (751)
Q Consensus 444 ~~~~~~~~~l~~~~~~~g~~~~lt~~ 469 (751)
.. ....-.+|.+|..+|+.+++...
T Consensus 295 ~~-~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 295 GQ-KSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp CT-TTCEEEEEEEETTTTEEEEEEEE
T ss_pred cC-CCCeEEEEEEcCCCceeeEcccc
Confidence 42 22334466678778877766644
No 233
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.61 E-value=3.9e-14 Score=142.74 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=132.7
Q ss_pred eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475 481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 560 (751)
Q Consensus 481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~ 560 (751)
.+...+...+|..+.+..+.+.+ +.|.||++||.+. +...| ..+...|+ +||.|++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~-----------~~~~~----~~~~~~L~-~~~~vi~- 60 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTR-----------NARDF----EDLATRLA-GDWRVLC- 60 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTC-----------CGGGG----HHHHHHHB-BTBCEEE-
T ss_pred cccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCc-----------chhhH----HHHHHHhh-cCCEEEe-
Confidence 35566677788888888775432 1367999999641 11111 12333444 4999999
Q ss_pred CCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC-
Q 004475 561 PSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS- 635 (751)
Q Consensus 561 ~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~- 635 (751)
++.+|+|.+.... .......+|+.++++.+ ..+++.|+||||||.+|+.+|.++|++++++|+.++.
T Consensus 61 --~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 132 (285)
T 3bwx_A 61 --PEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP 132 (285)
T ss_dssp --ECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred --ecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc
Confidence 6677888775422 23456677777777766 2357999999999999999999999999999986532
Q ss_pred -CCCC-----------CCcc-Cc---------------ccccccchhhH-H-HHHhc---------Cc-----c------
Q 004475 636 -YNKT-----------LTPF-GF---------------QTEFRTLWEAT-N-VYIEM---------SP-----I------ 665 (751)
Q Consensus 636 -~d~~-----------~~~~-~~---------------~~~~~~~~~~~-~-~~~~~---------~~-----~------ 665 (751)
.... .... .+ .......|... . .+... .+ +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 3bwx_A 133 EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGA 212 (285)
T ss_dssp SCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTC
T ss_pred ccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhc
Confidence 1100 0000 00 00000000000 0 00000 00 0
Q ss_pred -------cccCCC-CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 666 -------THANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 666 -------~~~~~~-~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
..+.++ ++|+|+++|++|..+| +..++.+. +. ..++++++++++|... .+.... +..+.+||.
T Consensus 213 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~----~~-~~~~~~~i~~~gH~~~-~e~p~~-~~~i~~fl~ 283 (285)
T 3bwx_A 213 TPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMA----SR-PGVELVTLPRIGHAPT-LDEPES-IAAIGRLLE 283 (285)
T ss_dssp CCSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHHHH----TS-TTEEEEEETTCCSCCC-SCSHHH-HHHHHHHHT
T ss_pred cccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHHHH----hC-CCcEEEEeCCCCccch-hhCchH-HHHHHHHHH
Confidence 001223 7999999999999998 66655443 44 5689999999999876 344444 467888885
Q ss_pred H
Q 004475 738 K 738 (751)
Q Consensus 738 ~ 738 (751)
+
T Consensus 284 ~ 284 (285)
T 3bwx_A 284 R 284 (285)
T ss_dssp T
T ss_pred h
Confidence 3
No 234
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.61 E-value=1.9e-14 Score=152.29 Aligned_cols=150 Identities=15% Similarity=0.225 Sum_probs=89.9
Q ss_pred CceEEEEEEcCC--C--ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC
Q 004475 479 LQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 554 (751)
Q Consensus 479 ~~~e~i~~~~~~--~--~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 554 (751)
+...++.+.+.+ + ..+.++++.|.+..+ .+++|+||++||++.......... .............|+++|
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~G 117 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQAKE----IRDAKGDDPLVTRLASQG 117 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCHHHH----HHHTTTCSHHHHTTGGGT
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCcccccc----cccccchHHHHHHHHHCC
Confidence 456677776654 3 358999999976432 346899999999753211000000 000111234566788999
Q ss_pred eEEEEcCCCCCCCCCCCCCC-chh--H---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHH-hCC---
Q 004475 555 FAVLAGPSIPIIGEGDKLPN-DRF--V---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLA-HAP--- 623 (751)
Q Consensus 555 ~~v~~~~~~~~~g~g~~~~~-~~~--~---~~~~~d~~~~v~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~-~~p--- 623 (751)
|+|++ .+++|+|.+... ..+ . ...+.|..+++..+.++ +..++++|+++||||||++|+.++. ..+
T Consensus 118 ~~V~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 194 (397)
T 3h2g_A 118 YVVVG---SDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLS 194 (397)
T ss_dssp CEEEE---ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred CEEEE---ecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcC
Confidence 99999 455566665321 111 1 12234444555444443 4445679999999999999988873 222
Q ss_pred -C-ceeEEEEccCCCC
Q 004475 624 -H-LFCCGIARSGSYN 637 (751)
Q Consensus 624 -~-~~~~~v~~~~~~d 637 (751)
+ .+.++++.++.++
T Consensus 195 ~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 195 KEFHLVASAPISGPYA 210 (397)
T ss_dssp TTSEEEEEEEESCCSS
T ss_pred cCcceEEEeccccccc
Confidence 1 5778887777655
No 235
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.61 E-value=1.3e-14 Score=147.59 Aligned_cols=210 Identities=14% Similarity=0.070 Sum_probs=126.7
Q ss_pred cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475 488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 567 (751)
Q Consensus 488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g 567 (751)
..+|..+.....- ..|+||++||.+. +...|. .+...|.+ ||.|++ ++.+|
T Consensus 19 ~~~g~~l~~~~~g----------~~~~vv~lHG~~~-----------~~~~~~----~~~~~l~~-~~~v~~---~D~~G 69 (306)
T 3r40_A 19 NTSSGRIFARVGG----------DGPPLLLLHGFPQ-----------THVMWH----RVAPKLAE-RFKVIV---ADLPG 69 (306)
T ss_dssp CCTTCCEEEEEEE----------CSSEEEEECCTTC-----------CGGGGG----GTHHHHHT-TSEEEE---ECCTT
T ss_pred EeCCEEEEEEEcC----------CCCeEEEECCCCC-----------CHHHHH----HHHHHhcc-CCeEEE---eCCCC
Confidence 3467777766643 1478999999742 112222 33445555 999999 56667
Q ss_pred CCCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC-
Q 004475 568 EGDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT- 639 (751)
Q Consensus 568 ~g~~~~~~-------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~- 639 (751)
+|.+.... ....+..+|+.++++.+ +.++++++||||||.+|+.+|.++|++++++|++++.....
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 143 (306)
T 3r40_A 70 YGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEY 143 (306)
T ss_dssp STTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHH
T ss_pred CCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccc
Confidence 77764432 23455666666666554 33589999999999999999999999999999999742100
Q ss_pred --------------------CCc---------------------------cCcccccc----cchhhH-------HHHHh
Q 004475 640 --------------------LTP---------------------------FGFQTEFR----TLWEAT-------NVYIE 661 (751)
Q Consensus 640 --------------------~~~---------------------------~~~~~~~~----~~~~~~-------~~~~~ 661 (751)
... ........ ..+..+ ..+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (306)
T 3r40_A 144 WQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRA 223 (306)
T ss_dssp HHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHh
Confidence 000 00000000 000000 00000
Q ss_pred c---------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHH
Q 004475 662 M---------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 732 (751)
Q Consensus 662 ~---------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 732 (751)
. .....+.++++|+|+++|++|.++| .....+..+.+. ..++++++ +++|... .+..+++.+.+
T Consensus 224 ~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~-~~gH~~~-~e~p~~~~~~i 296 (306)
T 3r40_A 224 GAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKWA---SDVQGAPI-ESGHFLP-EEAPDQTAEAL 296 (306)
T ss_dssp HHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHHB---SSEEEEEE-SSCSCHH-HHSHHHHHHHH
T ss_pred cccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhhc---CCCeEEEe-cCCcCch-hhChHHHHHHH
Confidence 0 0001347889999999999999987 555555554432 35677888 6799865 56677888999
Q ss_pred HHHHHHH
Q 004475 733 DRWLQKY 739 (751)
Q Consensus 733 ~~fl~~~ 739 (751)
.+||++.
T Consensus 297 ~~fl~~~ 303 (306)
T 3r40_A 297 VRFFSAA 303 (306)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9999864
No 236
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.60 E-value=4.9e-13 Score=135.94 Aligned_cols=245 Identities=12% Similarity=0.113 Sum_probs=155.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++||... ..+.|.++++.+++..+....... .+..++|+|||+.|+..+.+
T Consensus 15 ~V~~~~fsp~~~~l~s~~----------~dg~v~lWd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~s~s~d---- 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL----------YSGRVELWNYETQVEVRSIQVTET----PVRAGKFIARKNWIIVGSDD---- 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCSS----CEEEEEEEGGGTEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEc----------CCCcEEEEECCCCceeEEeeccCC----cEEEEEEeCCCCEEEEECCC----
Confidence 588999999999998863 346788889888764333222221 36788999999999887543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~ 188 (751)
..|.++|+ +|+ ...+..+ ..+..++|+||+++
T Consensus 77 ---------------------------------------------~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 77 ---------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp ---------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 46788888 663 4455545 77889999999998
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCc-eeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
|+..+.+ ..+.+||+.++ ...+.. ......+..++|+|++...++..+
T Consensus 112 l~sgs~D-------------~~v~lWd~~~~~~~~~~~------------~~h~~~v~~v~~~p~~~~~l~sgs------ 160 (304)
T 2ynn_A 112 VLSGSDD-------------LTVKLWNWENNWALEQTF------------EGHEHFVMCVAFNPKDPSTFASGC------ 160 (304)
T ss_dssp EEEEETT-------------SCEEEEEGGGTTEEEEEE------------CCCCSCEEEEEECTTCTTEEEEEE------
T ss_pred EEEECCC-------------CeEEEEECCCCcchhhhh------------cccCCcEEEEEECCCCCCEEEEEe------
Confidence 8866543 35889998754 322211 112233568999995443244443
Q ss_pred CccccCcccceeeccCCCCCCCCceEeE-eeceeEE-EEEec--CCceEEEeeeecccceeEEEecCCCCCCcceeeeec
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS-VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 343 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~-~~~sp--dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 343 (751)
..+.|.++++.. ......+. .....+. ..|+| |++.|+..+. ...|.+.|+.++ ........
T Consensus 161 ------~D~~v~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~--~~~~~~~~ 226 (304)
T 2ynn_A 161 ------LDRTVKVWSLGQ--STPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--SCVATLEG 226 (304)
T ss_dssp ------TTSEEEEEETTC--SSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTT--EEEEEEEC
T ss_pred ------CCCeEEEEECCC--CCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCC--ccceeeCC
Confidence 235788888741 12222332 2234455 67765 7777776552 245666677664 22222222
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 344 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 344 ~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
....+.. .+|+|+++.|+..+.+ ..|.+||+.+++......
T Consensus 227 h~~~v~~------~~~~p~~~~l~s~s~D---------------------g~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 227 HMSNVSF------AVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp CSSCEEE------EEECSSSSEEEEEETT---------------------SCEEEEETTTCCEEEEEC
T ss_pred CCCCEEE------EEECCCCCEEEEEcCC---------------------CeEEEEECCCCceeeecc
Confidence 2222222 7799999988887733 278999999887655443
No 237
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.60 E-value=1e-14 Score=145.36 Aligned_cols=204 Identities=16% Similarity=0.149 Sum_probs=121.5
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 588 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 588 (751)
+.|+||++||.+. ....| ..+...| ..+|.|++ .+.+|+|.+... .....+..+|+.++
T Consensus 19 ~~~~vv~~HG~~~-----------~~~~~----~~~~~~l-~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGG-----------SASFF----FPLAKAL-APAVEVLA---VQYPGRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTC-----------CGGGG----HHHHHHH-TTTEEEEE---ECCTTSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCC-----------CchhH----HHHHHHh-ccCcEEEE---ecCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 4699999999641 11111 1233344 45699999 555677655332 22345555555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEccCCCCCCCCccCccccc--------cc-----
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQTEF--------RT----- 651 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~d~~~~~~~~~~~~--------~~----- 651 (751)
++.+ +..+++|+||||||.+|+.++.++|++ ++++++.++............... ..
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 5443 346899999999999999999999986 888888876533211100000000 00
Q ss_pred --chhhH--------------HHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475 652 --LWEAT--------------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 715 (751)
Q Consensus 652 --~~~~~--------------~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 715 (751)
..... .....+.... ..++++|+|+++|++|..+| ...+..+.+.+. .+++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVS--VGEARAWEEHTT---GPADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCC--HHHHHGGGGGBS---SCEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCC--HHHHHHHHHhcC---CCceEEEecC-
Confidence 00000 0011111111 15678999999999999998 777666655442 2589999998
Q ss_pred CCcCCccccHHHHHHHHHHHHHHHhcCCCCCC
Q 004475 716 HHVYAARENVMHVIWETDRWLQKYCLSNTSDG 747 (751)
Q Consensus 716 ~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 747 (751)
+|.+. .+....+.+.+.+||++.....+...
T Consensus 227 gH~~~-~~~~~~~~~~i~~fl~~~~~~g~~~~ 257 (267)
T 3fla_A 227 GHFFL-VDQAAPMIATMTEKLAGPALTGSTGG 257 (267)
T ss_dssp STTHH-HHTHHHHHHHHHHHTC----------
T ss_pred Cceee-ccCHHHHHHHHHHHhccccccCccCC
Confidence 99876 45677888999999987765444433
No 238
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.60 E-value=4.4e-13 Score=140.07 Aligned_cols=310 Identities=12% Similarity=0.018 Sum_probs=164.2
Q ss_pred CeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCC
Q 004475 43 KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGP 122 (751)
Q Consensus 43 ~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 122 (751)
.+.+|+.... ...+....+|.++.++|+.++++.... .....++|||||++|++........
T Consensus 13 ~~~~~vg~y~---~~~~~~i~~~~~d~~~g~~~~~~~~~~----~~p~~l~~spdg~~l~~~~~~~~~~----------- 74 (361)
T 3scy_A 13 ELTMLVGTYT---SGNSKGIYTFRFNEETGESLPLSDAEV----ANPSYLIPSADGKFVYSVNEFSKDQ----------- 74 (361)
T ss_dssp EEEEEEEECC---SSSCCEEEEEEEETTTCCEEEEEEEEC----SCCCSEEECTTSSEEEEEECCSSTT-----------
T ss_pred ceEEEEEecc---CCCCCCEEEEEEeCCCCCEEEeecccC----CCCceEEECCCCCEEEEEEccCCCC-----------
Confidence 3555665422 111345667777878888777754311 1245779999999999885531110
Q ss_pred ceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCC---C-ceEEeeeeCCCCceEEEEEecCC
Q 004475 123 KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRP 197 (751)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~---~-~~~~~~~~SpDG~~i~~~~~~~~ 197 (751)
..-.+|.++. +|+.+++.. . .....+++ ||++|++....
T Consensus 75 --------------------------------~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~-- 118 (361)
T 3scy_A 75 --------------------------------AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS-- 118 (361)
T ss_dssp --------------------------------CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT--
T ss_pred --------------------------------CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC--
Confidence 1135566666 376555532 1 33445556 99998876532
Q ss_pred cccccccCCCceeEEEEeCCC-ceeeeecc---CCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccC
Q 004475 198 YSYKVPCARFSQKVQVWTTDG-KLVRELCD---LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (751)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~~-~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~ 273 (751)
...+.+|+++. +....+.. ..+. .+.........+..++|+|||++ ++++..
T Consensus 119 ----------~~~v~~~~~~~~g~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~spdg~~-l~~~~~----------- 174 (361)
T 3scy_A 119 ----------GGSITVFPIGQDGALLPASDVIEFKGS--GPDKERQTMPHLHCVRITPDGKY-LLADDL----------- 174 (361)
T ss_dssp ----------TTEEEEEEBCTTSCBCSCSEEEECCCC--CSCTTTCSSCCEEEEEECTTSSE-EEEEET-----------
T ss_pred ----------CCEEEEEEeCCCCcCcccceeEEccCC--CCCccccCCCcceEEEECCCCCE-EEEEeC-----------
Confidence 24577888863 32222211 1111 01000111122456899999998 666431
Q ss_pred cccceeeccCCCCCCC----C-ce------EeE-eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceee
Q 004475 274 PRDIIYTQPAEPAEGE----K-PE------ILH-KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 340 (751)
Q Consensus 274 ~~~~l~~~~~~~~~~~----~-~~------~l~-~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 340 (751)
..+.+++++++.. +. . .. .+. ....... ++|||||++|++.... ...|.+++++++ ..+.+
T Consensus 175 ~~~~v~v~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g--~~~~~ 248 (361)
T 3scy_A 175 GTDQIHKFNINPN-ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI---GGTVIAFRYADG--MLDEI 248 (361)
T ss_dssp TTTEEEEEEECTT-CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT---TCEEEEEEEETT--EEEEE
T ss_pred CCCEEEEEEEcCC-CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC---CCeEEEEEecCC--ceEEe
Confidence 1245666665421 21 1 11 111 1122344 8999999988776522 235666666553 22222
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec--CCCceeEEeeccchhhh
Q 004475 341 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI--NTGSKERIWESNREKYF 418 (751)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~--~~g~~~~l~~~~~~~~~ 418 (751)
......... ......++|||||++|++.... ....|.+|++ .+|+.+.+.....
T Consensus 249 ~~~~~~~~~-~~~~~~i~~spdg~~l~v~~~~-------------------~~~~i~v~~~~~~~g~~~~~~~~~~---- 304 (361)
T 3scy_A 249 QTVAADTVN-AQGSGDIHLSPDGKYLYASNRL-------------------KADGVAIFKVDETNGTLTKVGYQLT---- 304 (361)
T ss_dssp EEEESCSSC-CCCEEEEEECTTSSEEEEEECS-------------------SSCEEEEEEECTTTCCEEEEEEEEC----
T ss_pred EEEecCCCC-CCCcccEEECCCCCEEEEECCC-------------------CCCEEEEEEEcCCCCcEEEeeEecC----
Confidence 211111000 0011127899999998776621 0124555555 4676555432211
Q ss_pred hceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 004475 419 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 467 (751)
Q Consensus 419 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt 467 (751)
...+..++|||||++|++.... ...-.+|.+|+.+|+.+.+.
T Consensus 305 ------g~~~~~~~~spdg~~l~~~~~~-~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 305 ------GIHPRNFIITPNGKYLLVACRD-TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ------SSCCCEEEECTTSCEEEEEETT-TTEEEEEEECTTTCCEEECS
T ss_pred ------CCCCceEEECCCCCEEEEEECC-CCCEEEEEEECCCCcEeecc
Confidence 1123346899999988876533 22345666888888776543
No 239
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.2e-13 Score=142.49 Aligned_cols=267 Identities=8% Similarity=0.012 Sum_probs=169.6
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|++|++.+ ++...... .....+...+|+|||++|+... ..+.|.++++.+++.........
T Consensus 53 dg~i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~- 116 (369)
T 3zwl_B 53 DSSASVWYSLN----GERLGTLD-GHTGTIWSIDVDCFTKYCVTGS----------ADYSIKLWDVSNGQCVATWKSPV- 116 (369)
T ss_dssp SSCEEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEE----------TTTEEEEEETTTCCEEEEEECSS-
T ss_pred CCEEEEEeCCC----chhhhhhh-hcCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCcEEEEeecCC-
Confidence 34699999988 77665331 2233688999999999998863 34688899998887655544332
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..++|+|+|+.|+........ ....|.+++
T Consensus 117 ----~v~~~~~~~~~~~l~~~~~~~~~--------------------------------------------~~g~i~~~d 148 (369)
T 3zwl_B 117 ----PVKRVEFSPCGNYFLAILDNVMK--------------------------------------------NPGSINIYE 148 (369)
T ss_dssp ----CEEEEEECTTSSEEEEEECCBTT--------------------------------------------BCCEEEEEE
T ss_pred ----CeEEEEEccCCCEEEEecCCccC--------------------------------------------CCCEEEEEE
Confidence 36789999999999887542100 003455555
Q ss_pred C-CC-C-----------ceecCCC-c--eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC-ceee-eec
Q 004475 164 L-DG-T-----------AKDFGTP-A--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVR-ELC 225 (751)
Q Consensus 164 ~-~G-~-----------~~~lt~~-~--~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~-~l~ 225 (751)
+ .+ . ...+... . .+..++|+|||+.|++...+ ..|.+||+.+ .... .+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~ 215 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSID 215 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEE
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEe
Confidence 5 22 1 1111112 2 77899999999998876433 3688999986 3332 222
Q ss_pred cCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EE
Q 004475 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VS 304 (751)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~ 304 (751)
.+ ...+..+.|+|||+. |+... ..+.|+++++. .............+. +.
T Consensus 216 ~~-------------~~~v~~~~~~~~~~~-l~~~~------------~d~~i~v~d~~---~~~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 216 LH-------------EKSISDMQFSPDLTY-FITSS------------RDTNSFLVDVS---TLQVLKKYETDCPLNTAV 266 (369)
T ss_dssp CC-------------SSCEEEEEECTTSSE-EEEEE------------TTSEEEEEETT---TCCEEEEEECSSCEEEEE
T ss_pred cC-------------CCceeEEEECCCCCE-EEEec------------CCceEEEEECC---CCceeeeecCCCCceeEE
Confidence 11 233568999999998 55543 23578899885 334433344555666 99
Q ss_pred EecCCceEEEeeeecc----------cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecC
Q 004475 305 WCDDSLALVNETWYKT----------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 374 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~----------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 374 (751)
|+|+++.|++...... ....+.+.+..++ ............+.. ++|+|||+.|+..+.+
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~d-- 336 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--EEIGRVQGHFGPLNT------VAISPQGTSYASGGED-- 336 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTTC--CEEEEEECCSSCEEE------EEECTTSSEEEEEETT--
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--cchhheecccCcEEE------EEECCCCCEEEEEcCC--
Confidence 9999999988763221 1125666777664 222222222222222 7899999998887732
Q ss_pred CcceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
..|.+|+++++.
T Consensus 337 -------------------g~v~iw~~~~~~ 348 (369)
T 3zwl_B 337 -------------------GFIRLHHFEKSY 348 (369)
T ss_dssp -------------------SEEEEEEECHHH
T ss_pred -------------------CeEEEEECcccc
Confidence 268888887554
No 240
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.60 E-value=5.8e-15 Score=152.30 Aligned_cols=205 Identities=13% Similarity=0.101 Sum_probs=130.0
Q ss_pred CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCC
Q 004475 491 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD 570 (751)
Q Consensus 491 ~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~ 570 (751)
+..+.+..+-+. .|+||++||.+.. ... +...+...||.|++ ++.+|+|.
T Consensus 69 ~~~~~~~~~g~~---------~~~vv~~hG~~~~-----------~~~-------~~~~~~~lg~~Vi~---~D~~G~G~ 118 (330)
T 3p2m_A 69 AGAISALRWGGS---------APRVIFLHGGGQN-----------AHT-------WDTVIVGLGEPALA---VDLPGHGH 118 (330)
T ss_dssp ETTEEEEEESSS---------CCSEEEECCTTCC-----------GGG-------GHHHHHHSCCCEEE---ECCTTSTT
T ss_pred CceEEEEEeCCC---------CCeEEEECCCCCc-----------cch-------HHHHHHHcCCeEEE---EcCCCCCC
Confidence 335666666432 3779999996411 111 12233445999999 55667777
Q ss_pred CCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC--------
Q 004475 571 KLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT-------- 639 (751)
Q Consensus 571 ~~~~---~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~-------- 639 (751)
+... .....+..+|+.++++.+ +.++++|+||||||.+|+.+|.++|++++++|++++.....
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 192 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTA 192 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhh
Confidence 6522 223456666666666654 34689999999999999999999999999999998752100
Q ss_pred -CC---c-c----Cccccc--------ccchhhHHH----HHhc-------------C----------cccccCCCCCCE
Q 004475 640 -LT---P-F----GFQTEF--------RTLWEATNV----YIEM-------------S----------PITHANKIKKPI 675 (751)
Q Consensus 640 -~~---~-~----~~~~~~--------~~~~~~~~~----~~~~-------------~----------~~~~~~~~~~P~ 675 (751)
.. . . .+.... ......... +... . ....+.++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 272 (330)
T 3p2m_A 193 EQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPI 272 (330)
T ss_dssp C-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCE
T ss_pred hhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCE
Confidence 00 0 0 000000 000000000 0000 0 012345689999
Q ss_pred EEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEE-EEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 676 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSR-LVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 676 li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
|+++|++|..+| ...++.+.+.+. ..+ ++++++++|... .+..+.+.+.+.+||.+
T Consensus 273 Lii~G~~D~~v~--~~~~~~l~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 273 TLVRGGSSGFVT--DQDTAELHRRAT----HFRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhCC----CCeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 999999999998 888877776653 457 999999999875 56677888888888853
No 241
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.59 E-value=5.8e-13 Score=137.84 Aligned_cols=264 Identities=8% Similarity=0.061 Sum_probs=163.7
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++|+..+ ....|.++++.+++.......... .+..++|+|||+.|+..+.+
T Consensus 57 ~v~~~~~s~d~~~l~s~s----------~Dg~v~iWd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~d---- 118 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSAS----------QDGKLIIWDSYTTNKVHAIPLRSS----WVMTCAYAPSGNYVACGGLD---- 118 (340)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTTEEEEEETTTCCEEEEEECSSS----CEEEEEECTTSSEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEe----------CCCcEEEEECCCCCcceEeecCCc----cEEEEEECCCCCEEEEEeCC----
Confidence 688899999999998753 336788889887764433222221 36788999999999887542
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC--C---ceecCCC-ceEEeeeeCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--T---AKDFGTP-AVYTAVEPSP 184 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G--~---~~~lt~~-~~~~~~~~Sp 184 (751)
..+.++++ ++ . .+.+..+ ..+..+.|+|
T Consensus 119 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 119 ---------------------------------------------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp ---------------------------------------------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred ---------------------------------------------CeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 35556666 32 1 1223334 6677889999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
+++ |+..+. ...+.+||+.+++...... .....+..++|+|||+. ++..+
T Consensus 154 ~~~-l~s~s~-------------d~~i~~wd~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~-l~sg~--- 203 (340)
T 1got_B 154 DNQ-IVTSSG-------------DTTCALWDIETGQQTTTFT------------GHTGDVMSLSLAPDTRL-FVSGA--- 203 (340)
T ss_dssp TTE-EEEEET-------------TSCEEEEETTTTEEEEEEC------------CCSSCEEEEEECTTSSE-EEEEE---
T ss_pred CCc-EEEEEC-------------CCcEEEEECCCCcEEEEEc------------CCCCceEEEEECCCCCE-EEEEe---
Confidence 987 444332 2368899998765432211 11233568999999986 55433
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 343 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 343 (751)
..+.|.++++.. +.....+......+. +.|+|+|+.|+.++. ...|.+.++.++ ........
T Consensus 204 ---------~d~~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----d~~v~iwd~~~~--~~~~~~~~ 266 (340)
T 1got_B 204 ---------CDASAKLWDVRE--GMCRQTFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRAD--QELMTYSH 266 (340)
T ss_dssp ---------TTSCEEEEETTT--CSEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECC
T ss_pred ---------CCCcEEEEECCC--CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC----CCcEEEEECCCC--cEEEEEcc
Confidence 235788888751 223334444556677 999999998887652 235566666653 11111111
Q ss_pred cc--ccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhce
Q 004475 344 VF--ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 421 (751)
Q Consensus 344 ~~--~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 421 (751)
.. ..+.. ++|+|||+.|+....+ ..|.+||+.+++.......... .+
T Consensus 267 ~~~~~~v~~------~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~~~~h~~----~v 315 (340)
T 1got_B 267 DNIICGITS------VSFSKSGRLLLAGYDD---------------------FNCNVWDALKADRAGVLAGHDN----RV 315 (340)
T ss_dssp TTCCSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECCSS----CE
T ss_pred CCcccceEE------EEECCCCCEEEEECCC---------------------CeEEEEEcccCcEeeEeecCCC----cE
Confidence 11 11112 7899999998887732 3788999987766444332211 12
Q ss_pred eeeecCCcceeeccCCCEEEEE
Q 004475 422 VALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 422 ~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
. .++|+|||+.|+-.
T Consensus 316 ~-------~~~~s~dg~~l~s~ 330 (340)
T 1got_B 316 S-------CLGVTDDGMAVATG 330 (340)
T ss_dssp E-------EEEECTTSSCEEEE
T ss_pred E-------EEEEcCCCCEEEEE
Confidence 2 25799999877644
No 242
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.59 E-value=6.7e-14 Score=145.86 Aligned_cols=254 Identities=9% Similarity=0.063 Sum_probs=145.4
Q ss_pred ceeEEeecCCCCCCCCccccc--C-CCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVH--G-YPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~--~-~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
..|++++..+ +...... . ......+...+|||||+.|+- .....|.++++.+++...+....
T Consensus 70 ~~v~~~~~~~----~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~-----------s~dg~v~lWd~~~~~~~~~~~~~ 134 (357)
T 4g56_B 70 GSIWVFKDPE----GAPNESLCTAGVQTEAGVTDVAWVSEKGILVA-----------SDSGAVELWEILEKESLLVNKFA 134 (357)
T ss_dssp EEEEEESSCC-------CGGGCSEEEECSSCEEEEEEETTTEEEEE-----------ETTSCEEEC--------CCCCEE
T ss_pred CeEEEEECCC----CCcceeEecccCCCCCCEEEEEEcCCCCEEEE-----------ECCCEEEEeeccccceeEEEeec
Confidence 4578888766 5543211 0 112225788999999976653 22356777788777644332111
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.......+..++|+|||++|+..+.+ ..|.+
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~d-------------------------------------------------g~v~i 165 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKD-------------------------------------------------FSVKV 165 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEE
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCC-------------------------------------------------CeEEE
Confidence 00001247789999999999877442 45777
Q ss_pred EcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475 162 GSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (751)
Q Consensus 162 ~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (751)
+|+ +++ ...+..+ ..+..++|+|+++.++++... ...+.+||+.+++....... .
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~------------dg~v~~wd~~~~~~~~~~~~----------~ 223 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE------------DGRILLWDTRKPKPATRIDF----------C 223 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET------------TSCEEECCTTSSSCBCBCCC----------T
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc------------CCceEEEECCCCceeeeeee----------c
Confidence 788 663 3444444 678899999999866555433 23688999986644322111 1
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCce-EEEee
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLA-LVNET 316 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~-l~~~~ 316 (751)
.....+..++|+|++..+++... ..+.|+++++.. +.....+......+. ++||||++. |+..+
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~------------~d~~i~~wd~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGD------------ETGNVSLVNIKN--PDSAQTSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEE------------SSSCEEEEESSC--GGGCEEECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred cccccccchhhhhcccceEEEee------------cccceeEEECCC--CcEeEEEeccceeEEEEEEcCCCCCEEEEEe
Confidence 11223558899999887344432 235788888751 233444555566677 999999865 44433
Q ss_pred eecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCC-CCCEEEEeee
Q 004475 317 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIK 371 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp-DG~~l~~~~~ 371 (751)
....|.+.|++++ +..... .....+.. ++||| ||+.|+..+.
T Consensus 290 ----~D~~i~iwd~~~~--~~~~~~-~H~~~V~~------vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 290 ----EDCTVAVLDADFS--EVFRDL-SHRDFVTG------VAWSPLDHSKFTTVGW 332 (357)
T ss_dssp ----TTSCEEEECTTSC--EEEEEC-CCSSCEEE------EEECSSSTTEEEEEET
T ss_pred ----CCCEEEEEECCCC--cEeEEC-CCCCCEEE------EEEeCCCCCEEEEEcC
Confidence 2245777788774 222222 12222333 88998 8988887773
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.58 E-value=3.2e-13 Score=157.72 Aligned_cols=241 Identities=12% Similarity=0.098 Sum_probs=159.2
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCee-eccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
.+...+|||||++||+.. ..+.|.++++.+++.. .+..... .+..++|||||++|+..+.+
T Consensus 15 ~v~~i~~sp~~~~la~~~----------~~g~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~d--- 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL----------YSGRVEIWNYETQVEVRSIQVTET-----PVRAGKFIARKNWIIVGSDD--- 76 (814)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCSS-----CEEEEEEEGGGTEEEEEETT---
T ss_pred ceEEEEECCCCCEEEEEe----------CCCEEEEEECCCCceEEEEecCCC-----cEEEEEEeCCCCEEEEEeCC---
Confidence 588999999999999963 3467888898887643 3432222 37889999999999988542
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCc
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~ 187 (751)
..|.++++ +|+ ...+..+ ..+..++|+|||+
T Consensus 77 ----------------------------------------------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 110 (814)
T 3mkq_A 77 ----------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP 110 (814)
T ss_dssp ----------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred ----------------------------------------------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC
Confidence 47888888 663 4455545 7789999999999
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCc-ee-eeeccCCCCCCCCCccCCccCCCceeeeec-CCCceEEEEEecc
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LV-RELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~~i~~~~~~~ 264 (751)
+|+....+ ..+.+|+.+++ .. ..+..+ ...+..++|+| ||+. ++...
T Consensus 111 ~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~-l~~~~--- 160 (814)
T 3mkq_A 111 YVLSGSDD-------------LTVKLWNWENNWALEQTFEGH-------------EHFVMCVAFNPKDPST-FASGC--- 160 (814)
T ss_dssp EEEEEETT-------------SEEEEEEGGGTSEEEEEEECC-------------SSCEEEEEEETTEEEE-EEEEE---
T ss_pred EEEEEcCC-------------CEEEEEECCCCceEEEEEcCC-------------CCcEEEEEEEcCCCCE-EEEEe---
Confidence 98876433 36889998754 32 222211 22356889999 7776 55543
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEec--CCceEEEeeeecccceeEEEecCCCCCCcceee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 340 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~sp--dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 340 (751)
..+.|.++++.. +.....+.... ..+. +.|+| ++..|+.... ...|.+.+..++ .....
T Consensus 161 ---------~dg~v~vwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~--~~~~~ 223 (814)
T 3mkq_A 161 ---------LDRTVKVWSLGQ--STPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--SCVAT 223 (814)
T ss_dssp ---------TTSEEEEEETTC--SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT----TSEEEEEETTTT--EEEEE
T ss_pred ---------CCCeEEEEECCC--CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCC--cEEEE
Confidence 235788888751 22333333322 4555 89998 9998887652 346777787764 22222
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 341 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
.......+.. ++|+|||+.|+..+.+ ..|++||+.+++.....
T Consensus 224 ~~~~~~~v~~------~~~~~~~~~l~~~~~d---------------------g~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 224 LEGHMSNVSF------AVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EECCSSCEEE------EEECSSSSEEEEEETT---------------------SCEEEEETTTCSEEEEE
T ss_pred EcCCCCCEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCcEEEEe
Confidence 2222222222 7899999988887732 26888898877665443
No 244
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.58 E-value=1.2e-14 Score=147.13 Aligned_cols=209 Identities=7% Similarity=-0.068 Sum_probs=133.4
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+....+-+ .|+||++||.+.. ...|.. +...| .++|.|++ ++.+|+
T Consensus 15 ~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~~~----~~~~l-~~~~~vi~---~D~~G~ 65 (297)
T 2qvb_A 15 IAGKRMAYIDEGK----------GDAIVFQHGNPTS-----------SYLWRN----IMPHL-EGLGRLVA---CDLIGM 65 (297)
T ss_dssp ETTEEEEEEEESS----------SSEEEEECCTTCC-----------GGGGTT----TGGGG-TTSSEEEE---ECCTTS
T ss_pred ECCEEEEEEecCC----------CCeEEEECCCCch-----------HHHHHH----HHHHH-hhcCeEEE---EcCCCC
Confidence 4676776665521 3789999997521 112221 12233 34699999 566677
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475 569 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 641 (751)
Q Consensus 569 g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~id~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~ 641 (751)
|.+.... ....+..+|+.++++.+ +. .+++++||||||.+|+.++.++|++++++|++++.......
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 139 (297)
T 2qvb_A 66 GASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTW 139 (297)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCG
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccC
Confidence 7764432 34556677777776654 23 68999999999999999999999999999999986531100
Q ss_pred c-cC-----------ccc----------------------ccc---------------cchhh-HHHHHhc---------
Q 004475 642 P-FG-----------FQT----------------------EFR---------------TLWEA-TNVYIEM--------- 662 (751)
Q Consensus 642 ~-~~-----------~~~----------------------~~~---------------~~~~~-~~~~~~~--------- 662 (751)
. .. ... ... ..... ...+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2qvb_A 140 ADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEV 219 (297)
T ss_dssp GGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHH
T ss_pred CCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhh
Confidence 0 00 000 000 00000 0000111
Q ss_pred -----CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 663 -----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 663 -----~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
.....+.++++|+|+++|++|..+| ...++.+.+.+ .. +++++ +++|... .+....+.+.+.+||+
T Consensus 220 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl~ 290 (297)
T 2qvb_A 220 VALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQFVR 290 (297)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHHHHH
Confidence 1122345689999999999999998 77766665443 34 78888 9999876 5667889999999998
Q ss_pred HHhc
Q 004475 738 KYCL 741 (751)
Q Consensus 738 ~~l~ 741 (751)
+...
T Consensus 291 ~~~~ 294 (297)
T 2qvb_A 291 RLRS 294 (297)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7653
No 245
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.58 E-value=2.1e-14 Score=147.73 Aligned_cols=212 Identities=11% Similarity=0.059 Sum_probs=127.1
Q ss_pred ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC-CCCCCCC
Q 004475 492 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-PIIGEGD 570 (751)
Q Consensus 492 ~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~-~~~g~g~ 570 (751)
..+....+.|.. ...|+||++||.+. +...+ .+...+...| ++||.|++++.+ +.+|+|.
T Consensus 24 ~~~~y~~~g~~~------~~~~~vvllHG~~~-----------~~~~~-~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~ 84 (335)
T 2q0x_A 24 PYCKIPVFMMNM------DARRCVLWVGGQTE-----------SLLSF-DYFTNLAEEL-QGDWAFVQVEVPSGKIGSGP 84 (335)
T ss_dssp TTEEEEEEEECT------TSSSEEEEECCTTC-----------CTTCS-TTHHHHHHHH-TTTCEEEEECCGGGBTTSCS
T ss_pred CceeEEEeccCC------CCCcEEEEECCCCc-----------cccch-hHHHHHHHHH-HCCcEEEEEeccCCCCCCCC
Confidence 445555555311 12578999999531 10111 1111233344 789999985432 5678887
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH--hCCCceeEEEEccCCCCCCCCccCc---
Q 004475 571 KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA--HAPHLFCCGIARSGSYNKTLTPFGF--- 645 (751)
Q Consensus 571 ~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~--~~p~~~~~~v~~~~~~d~~~~~~~~--- 645 (751)
+. .....+|+.++++++.+. ++..+++|+||||||.+|+.++. .+|++++++|+.++..+........
T Consensus 85 S~-----~~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~ 157 (335)
T 2q0x_A 85 QD-----HAHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGC 157 (335)
T ss_dssp CC-----HHHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHH
T ss_pred cc-----ccCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHH
Confidence 63 234567888888888774 34578999999999999999998 4789999999998864322000000
Q ss_pred c-----------c----cc--ccch-h---hHHHHH-------------------hcCcccccCCCCCCEEEEEcCCCCC
Q 004475 646 Q-----------T----EF--RTLW-E---ATNVYI-------------------EMSPITHANKIKKPILIIHGEVDDK 685 (751)
Q Consensus 646 ~-----------~----~~--~~~~-~---~~~~~~-------------------~~~~~~~~~~~~~P~li~~G~~D~~ 685 (751)
. . .. ...+ . ....+. .......+.++++|+|+++|++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~ 237 (335)
T 2q0x_A 158 AARKEHVEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQY 237 (335)
T ss_dssp HHHHHHHHHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTC
T ss_pred HHHHHHHHHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCC
Confidence 0 0 00 0000 0 000000 0011234677899999999999999
Q ss_pred CCCChHH-HHHHHHHHHhCCCcEE--------E-----EEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 686 VGLFPMQ-AERFFDALKGHGALSR--------L-----VLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 686 vp~~~~~-~~~~~~~l~~~~~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
+| +.. ...+.+.+.+.-...+ + +++|+++| +..+.+.+||.+..
T Consensus 238 vp--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 238 KP--SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp CC--CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred CC--hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 98 653 2233344433212223 5 78999999 23788899997653
No 246
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.58 E-value=7.7e-15 Score=157.99 Aligned_cols=68 Identities=19% Similarity=0.121 Sum_probs=55.2
Q ss_pred cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC-CCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 666 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 666 ~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
..+.++++|+|+++|++|.++| ...++++.+.+. .+++++++ ++||... .+....+.+.+.+||.+++
T Consensus 375 ~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~p----~~~~~~i~~~~GH~~~-~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 375 EALAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHTC--
T ss_pred HHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHCC----CcEEEEeCCCCCcchH-HhCHHHHHHHHHHHHHHhc
Confidence 3467889999999999999998 888887777664 46899999 8999876 4567788899999997654
No 247
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.58 E-value=2.9e-14 Score=141.09 Aligned_cols=196 Identities=8% Similarity=-0.031 Sum_probs=125.9
Q ss_pred cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc---hhHHHHHHHHHHHH
Q 004475 513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 589 (751)
Q Consensus 513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v 589 (751)
|.||++||.+. +...|. .....|+++||.|++ ++.+|+|.+.... ...++..+|+.+.+
T Consensus 4 ~~vvllHG~~~-----------~~~~w~----~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICH-----------GAWIWH----KLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTC-----------CGGGGT----THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCcc-----------CcCCHH----HHHHHHHhCCCEEEE---eCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 67999999641 111121 345677789999999 6777888875421 23456666666665
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC-Ccc-----------Cccccc--------
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPF-----------GFQTEF-------- 649 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~-~~~-----------~~~~~~-------- 649 (751)
+.+ + ...++.|+||||||.+++.++.++|++++++|++++...... ... .+....
T Consensus 66 ~~l---~--~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 3c6x_A 66 EAL---P--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDG 140 (257)
T ss_dssp HTS---C--TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETT
T ss_pred Hhc---c--ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCC
Confidence 543 1 125899999999999999999999999999999886421100 000 000000
Q ss_pred ---ccchhhH----------------HHHHh-cCcc----------ccc--CC-CCCCEEEEEcCCCCCCCCChHHHHHH
Q 004475 650 ---RTLWEAT----------------NVYIE-MSPI----------THA--NK-IKKPILIIHGEVDDKVGLFPMQAERF 696 (751)
Q Consensus 650 ---~~~~~~~----------------~~~~~-~~~~----------~~~--~~-~~~P~li~~G~~D~~vp~~~~~~~~~ 696 (751)
....... ..... ..+. ..+ .. .++|+|+++|++|..+| +..++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~~ 218 (257)
T 3c6x_A 141 KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQ 218 (257)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHH
T ss_pred CccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHHH
Confidence 0000000 00000 0000 000 11 26899999999999998 8887777
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 697 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
.+.+. ..+++++|+++|... .+..+.+.+.+.+|+++
T Consensus 219 ~~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 219 IENYK----PDKVYKVEGGDHKLQ-LTKTKEIAEILQEVADT 255 (257)
T ss_dssp HHHSC----CSEEEECCSCCSCHH-HHSHHHHHHHHHHHHHH
T ss_pred HHHCC----CCeEEEeCCCCCCcc-cCCHHHHHHHHHHHHHh
Confidence 76653 358999999999876 67778899999999875
No 248
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.58 E-value=6.4e-13 Score=142.67 Aligned_cols=305 Identities=10% Similarity=0.066 Sum_probs=170.4
Q ss_pred cccceeecCC-CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEec-CCcEEEEeecCCC
Q 004475 32 KINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPD-G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~ 109 (751)
.+...+|||+ ++.||.- ...+.|.++++.+++...+.....+ ...+..++|+| |++.|+..+.+
T Consensus 121 ~V~~l~~~P~~~~~lasG----------s~dg~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D-- 186 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVG----------SKGGDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSME-- 186 (435)
T ss_dssp CEEEEEECSSCTTCEEEE----------ETTSCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSS--
T ss_pred CEEEEEEeCCCCCEEEEE----------eCCCEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCC--
Confidence 4788999995 5566663 3346788888887765443322221 11478899998 68887766432
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC----ceEEeeeeCC
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPSP 184 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~----~~~~~~~~Sp 184 (751)
..|.++|+.+ ..+.+... ..+..++|+|
T Consensus 187 -----------------------------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 187 -----------------------------------------------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp -----------------------------------------------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred -----------------------------------------------CEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 3566778854 33333222 3456789999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
||+.|+....+ ..|.+||++++....+.. ....+..++|+|+++.+++..+
T Consensus 220 ~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~~~s~s--- 270 (435)
T 4e54_B 220 SSRMVVTGDNV-------------GNVILLNMDGKELWNLRM-------------HKKKVTHVALNPCCDWFLATAS--- 270 (435)
T ss_dssp TTTEEEEECSS-------------SBEEEEESSSCBCCCSBC-------------CSSCEEEEEECTTCSSEEEEEE---
T ss_pred CCCEEEEEeCC-------------CcEeeeccCcceeEEEec-------------ccceEEeeeecCCCceEEEEec---
Confidence 99998875432 368899998765443322 2234668999999998444433
Q ss_pred CCCCccccCcccceeeccCCCCCCC-CceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 342 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 342 (751)
..+.|.++++...... ...........+. +.|+|||++|+..+. ...|.+.++.++ .....+..
T Consensus 271 ---------~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~----D~~i~iwd~~~~-~~~~~~~~ 336 (435)
T 4e54_B 271 ---------VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ----KSEIRVYSASQW-DCPLGLIP 336 (435)
T ss_dssp ---------TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES----SSCEEEEESSSS-SSEEEECC
T ss_pred ---------CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC----CCEEEEEECCCC-ccceEEec
Confidence 2246777776421111 1111123345566 899999999887652 235666666654 22222222
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhcee
Q 004475 343 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 422 (751)
Q Consensus 343 ~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 422 (751)
..... ..........|+|++..++...... +..+++ .......|.+||..+|+.......... ..+.
T Consensus 337 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~------~~~~~~~i~iwd~~~g~~~~~l~~~~~---~~v~ 403 (435)
T 4e54_B 337 HPHRH-FQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSC------TPYELRTIDVFDGNSGKMMCQLYDPES---SGIS 403 (435)
T ss_dssp CCCCC-CSSSCCCBCEECSSSSCEEEECCCC---TTSCCS------STTCCCCEEEECSSSCCEEEEECCSSC---CCCC
T ss_pred ccccc-cccceeEEEEEcCCCCEEEEEEcCC---CCeEEE------EecCCCEEEEEECCCCcEEEEEeCCCC---CcEE
Confidence 11110 0000111156889998877765321 111110 112234688999998876543322111 0111
Q ss_pred eeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 423 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 423 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
. ..+|||||+.|+- . + . ..|.++++.+|+.+
T Consensus 404 s------~~~fspdg~~las-g-~-d--~~i~iW~~~~gk~r 434 (435)
T 4e54_B 404 S------LNEFNPMGDTLAS-A-M-G--YHILIWSQQEARTR 434 (435)
T ss_dssp C------EEEECTTSSCEEE-E-C-S--SEEEECCCC-----
T ss_pred E------EEEECCCCCEEEE-E-c-C--CcEEEEECCcCeee
Confidence 1 1368999997763 2 2 1 36899999888765
No 249
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.58 E-value=2.6e-13 Score=141.98 Aligned_cols=276 Identities=9% Similarity=-0.019 Sum_probs=141.2
Q ss_pred eeEEeecCCCCCCCCcccccCC--CCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcC-CCCeeeccCCCC
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGY--PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE-TGEAKPLFESPD 82 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~--~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~-~g~~~~lt~~~~ 82 (751)
+|++++++. .+|+.+.+... .........+|||||++|+.+. .. .|.+++++ +|+..++.....
T Consensus 15 ~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~---------~~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 15 AIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA---------MK--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE---------BT--EEEEEEEEETTEEEEEEEEEC
T ss_pred cEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc---------cc--eEEEEEECCCCCEEEeeEeec
Confidence 588887754 44777666432 1222467889999999887653 12 67777765 676555432111
Q ss_pred ccccceeeeeEEecCCcEE-EEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLL-IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. ....++|||||++| ++..... .. ...... .+ .......+|.
T Consensus 82 ~g---~~~~~~~spdg~~l~~~~~~~~--~~------------~~~~~~------~~-------------~~~g~v~v~~ 125 (365)
T 1jof_A 82 GG---HPRANDADTNTRAIFLLAAKQP--PY------------AVYANP------FY-------------KFAGYGNVFS 125 (365)
T ss_dssp CS---SGGGGCTTSCCEEEEEEECSST--TC------------CEEEEE------ES-------------SSCCEEEEEE
T ss_pred CC---CCccEEECCCCCEEEEEEecCC--cc------------eeccce------ee-------------cCCceEEEEc
Confidence 00 12457999999974 3442200 00 000000 00 0001124455
Q ss_pred EcCCCCce-ecC-----CCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-CceeeeeccCCCCCCCC
Q 004475 162 GSLDGTAK-DFG-----TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIP 234 (751)
Q Consensus 162 ~~~~G~~~-~lt-----~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~ 234 (751)
++.+|+.. .+. .......++|||||++|++.... ...|++|+++ +++.+.+......
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~---- 189 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAP---- 189 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECS----
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecC----
Confidence 54456432 222 12567789999999998775322 2468899987 6655433211100
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCce----EeEee----c--e-----
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILHKL----D--L----- 299 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~l~~~----~--~----- 299 (751)
....+++.++|||||++ ++++.. ..+.+.+++++..++ ... .+... . .
T Consensus 190 ----~~g~~p~~~~~spdg~~-l~v~~~-----------~~~~v~v~~~~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 190 ----DPGDHPRWVAMHPTGNY-LYALME-----------AGNRICEYVIDPATH-MPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp ----STTCCEEEEEECTTSSE-EEEEET-----------TTTEEEEEEECTTTC-CEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred ----CCCCCCCEeEECCCCCE-EEEEEC-----------CCCeEEEEEEeCCCC-cEEEccceEEcCCCCcCCccccccc
Confidence 01234678999999998 666431 113444444321112 221 12111 0 1
Q ss_pred --eEE-EE-EecCCceEEEeeeeccc----ceeEEEecCCCCCCcceeeee-cccccccCCCCCCCeeeCC---CCCEEE
Q 004475 300 --RFS-VS-WCDDSLALVNETWYKTS----QTRTWLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTS---TGTNVI 367 (751)
Q Consensus 300 --~~~-~~-~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~sp---DG~~l~ 367 (751)
... ++ |||||++|+.+...... .-.+|.++. ++ ..+.+.. ...... ....++||| ||++|+
T Consensus 253 ~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g--~~~~~~~~~~~~~~----~~~~~a~sp~~~dg~~l~ 325 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CG--SIEKQLFLSPTPTS----GGHSNAVSPCPWSDEWMA 325 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TS--CEEEEEEEEECSSC----CTTCCCEEECTTCTTEEE
T ss_pred ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CC--CEEEeeeeeecCCC----CcccceecCCCcCCCEEE
Confidence 345 88 99999988654422110 234555543 32 2332211 110000 011167899 899988
Q ss_pred Eee
Q 004475 368 AKI 370 (751)
Q Consensus 368 ~~~ 370 (751)
+..
T Consensus 326 v~~ 328 (365)
T 1jof_A 326 ITD 328 (365)
T ss_dssp EEC
T ss_pred EEE
Confidence 776
No 250
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.58 E-value=5.8e-13 Score=141.67 Aligned_cols=264 Identities=11% Similarity=0.083 Sum_probs=167.8
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||+.|+..+ ....|.++++.+++..+...+... .+..++|+|||+.|+..+.+
T Consensus 110 ~V~~~~~~p~~~~l~s~s----------~Dg~i~vwd~~~~~~~~~l~~h~~----~V~~v~~~~~~~~l~sgs~D---- 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSAS----------EDATIKVWDYETGDFERTLKGHTD----SVQDISFDHSGKLLASCSAD---- 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEE----------SSSCEEEEETTTCCCCEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCcEEEEEeccCC----cEEEEEEcCCCCEEEEEeCC----
Confidence 577889999999988753 346788889988875444333221 47789999999988877543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~ 188 (751)
..|.++|+ +++ .+.+..+ ..+..++|+|||++
T Consensus 172 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 172 ---------------------------------------------MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ---------------------------------------------SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 34556677 443 3344444 67889999999999
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
|+..+.+ ..+.+||+.++... .+.. ....+..+.|+|||+. |+..+
T Consensus 207 l~s~s~D-------------~~i~~wd~~~~~~~~~~~~-------------h~~~v~~~~~~~~g~~-l~s~s------ 253 (410)
T 1vyh_C 207 IVSASRD-------------KTIKMWEVQTGYCVKTFTG-------------HREWVRMVRPNQDGTL-IASCS------ 253 (410)
T ss_dssp EEEEETT-------------SEEEEEETTTCCEEEEEEC-------------CSSCEEEEEECTTSSE-EEEEE------
T ss_pred EEEEeCC-------------CeEEEEECCCCcEEEEEeC-------------CCccEEEEEECCCCCE-EEEEc------
Confidence 8766543 36889999876532 2221 1233567899999997 55543
Q ss_pred CccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecC--------------------CceEEEeeeecccceeEE
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDD--------------------SLALVNETWYKTSQTRTW 326 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spd--------------------g~~l~~~~~~~~~~~~l~ 326 (751)
..+.|.++++.. +.....+......+. +.|+|+ |..|+.++ ....|.
T Consensus 254 ------~D~~v~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----~D~~i~ 321 (410)
T 1vyh_C 254 ------NDQTVRVWVVAT--KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----RDKTIK 321 (410)
T ss_dssp ------TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE----TTSEEE
T ss_pred ------CCCeEEEEECCC--CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe----CCCeEE
Confidence 235788888741 222333444555666 899997 44555444 234677
Q ss_pred EecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce
Q 004475 327 LVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK 406 (751)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 406 (751)
+.|+.++ ............+.. ++|+|+|++|+..+.+ ..|++||+.+++.
T Consensus 322 iwd~~~~--~~~~~~~~h~~~v~~------v~~~~~g~~l~s~s~D---------------------~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 322 MWDVSTG--MCLMTLVGHDNWVRG------VLFHSGGKFILSCADD---------------------KTLRVWDYKNKRC 372 (410)
T ss_dssp EEETTTT--EEEEEEECCSSCEEE------EEECSSSSCEEEEETT---------------------TEEEEECCTTSCC
T ss_pred EEECCCC--ceEEEEECCCCcEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCce
Confidence 7777764 222222222222222 7899999999887732 3789999988765
Q ss_pred eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEE
Q 004475 407 ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 407 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
......... .+.. ++|+|+++.|+..
T Consensus 373 ~~~~~~h~~----~v~~-------l~~~~~~~~l~sg 398 (410)
T 1vyh_C 373 MKTLNAHEH----FVTS-------LDFHKTAPYVVTG 398 (410)
T ss_dssp CEEEECCSS----CEEE-------EEECSSSSCEEEE
T ss_pred EEEEcCCCC----cEEE-------EEEcCCCCEEEEE
Confidence 444332211 1222 5889999877643
No 251
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.57 E-value=1.4e-14 Score=143.57 Aligned_cols=189 Identities=11% Similarity=0.064 Sum_probs=116.8
Q ss_pred EEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHH
Q 004475 514 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVEEV 592 (751)
Q Consensus 514 ~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~~l 592 (751)
.||++||.+. +...|. .....| ..+|.|++ ++.+|+|.+..... .... .++.+
T Consensus 15 ~vvllHG~~~-----------~~~~w~----~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~-------~~~~l 68 (258)
T 1m33_A 15 HLVLLHGWGL-----------NAEVWR----CIDEEL-SSHFTLHL---VDLPGFGRSRGFGALSLAD-------MAEAV 68 (258)
T ss_dssp EEEEECCTTC-----------CGGGGG----GTHHHH-HTTSEEEE---ECCTTSTTCCSCCCCCHHH-------HHHHH
T ss_pred eEEEECCCCC-----------ChHHHH----HHHHHh-hcCcEEEE---eeCCCCCCCCCCCCcCHHH-------HHHHH
Confidence 8999999641 112222 233344 46899999 66778887754321 1222 22333
Q ss_pred HHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC-ccC-cccc--------c-------------
Q 004475 593 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFG-FQTE--------F------------- 649 (751)
Q Consensus 593 ~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~-~~~-~~~~--------~------------- 649 (751)
.+. ++ +++.|+||||||.+|+.+|.++|++++++|++++....... .+. .... .
T Consensus 69 ~~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (258)
T 1m33_A 69 LQQ--AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLA 145 (258)
T ss_dssp HTT--SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH--hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHH
Confidence 332 33 68999999999999999999999999999998764221100 000 0000 0
Q ss_pred ----ccch--hhHH----------------------HHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHH
Q 004475 650 ----RTLW--EATN----------------------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 701 (751)
Q Consensus 650 ----~~~~--~~~~----------------------~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~ 701 (751)
.... ...+ .+........+.++++|+|+++|++|..+| ...++.+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~- 222 (258)
T 1m33_A 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLW- 222 (258)
T ss_dssp TTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTTC-
T ss_pred HHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHhC-
Confidence 0000 0000 001112223456789999999999999998 66655444332
Q ss_pred hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 702 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 702 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
...+++++++++|... .+..+.+.+.+.+||.+
T Consensus 223 ---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 223 ---PHSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR 255 (258)
T ss_dssp ---TTCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred ---ccceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 3468999999999876 45677888899999864
No 252
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.57 E-value=2.4e-13 Score=140.56 Aligned_cols=230 Identities=9% Similarity=0.074 Sum_probs=141.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+||||+ +|+.. ...+.|.++++++++...............+..++|||||++|+..+.+
T Consensus 84 ~v~~~~~s~d~-~l~~~----------s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---- 148 (344)
T 4gqb_B 84 GVADLTWVGER-GILVA----------SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---- 148 (344)
T ss_dssp CEEEEEEETTT-EEEEE----------ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEeCCC-eEEEE----------ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 46788999997 45543 2346788888888764332211000001147889999999999887543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~ 188 (751)
..|.++|+ +|+ ...+..+ ..+..++|+||++.
T Consensus 149 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 149 ---------------------------------------------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 36777888 664 3455545 77889999999987
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
++++... ...|.+||+.+++......... ....+..+.|+|++..+++..+
T Consensus 184 ~l~s~s~------------D~~v~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~p~~~~~l~sg~------- 234 (344)
T 4gqb_B 184 VFLSCSE------------DNRILLWDTRCPKPASQIGCSA----------PGYLPTSLAWHPQQSEVFVFGD------- 234 (344)
T ss_dssp EEEEEET------------TSCEEEEETTSSSCEEECC--------------CCCEEEEEECSSCTTEEEEEE-------
T ss_pred ceeeecc------------ccccccccccccceeeeeecce----------eeccceeeeecCCCCcceEEec-------
Confidence 7665433 3468899998765432211110 1122457899998887344433
Q ss_pred ccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCce-EEEeeeecccceeEEEecCCCCCCcceeeeecccc
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 346 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~-l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 346 (751)
..+.|.++|+. ++.....+......+. ++|||||.. |+..+ ....|.+.|..++ +...+ .....
T Consensus 235 -----~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs----~D~~i~vwd~~~~--~~~~~-~~H~~ 300 (344)
T 4gqb_B 235 -----ENGTVSLVDTK--STSCVLSSAVHSQCVTGLVFSPHSVPFLASLS----EDCSLAVLDSSLS--ELFRS-QAHRD 300 (344)
T ss_dssp -----TTSEEEEEESC--C--CCEEEECCSSCEEEEEECSSSSCCEEEEE----TTSCEEEECTTCC--EEEEE-CCCSS
T ss_pred -----cCCcEEEEECC--CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe----CCCeEEEEECCCC--cEEEE-cCCCC
Confidence 23578888885 2344555666666777 999999965 54433 2245666787774 22222 22222
Q ss_pred cccCCCCCCCeeeCCCCCEEEEee
Q 004475 347 NVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 347 ~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.+.. ++|||||+.|+...
T Consensus 301 ~V~~------v~~sp~~~~llas~ 318 (344)
T 4gqb_B 301 FVRD------ATWSPLNHSLLTTV 318 (344)
T ss_dssp CEEE------EEECSSSTTEEEEE
T ss_pred CEEE------EEEeCCCCeEEEEE
Confidence 3333 88999998776544
No 253
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.57 E-value=1.6e-12 Score=134.77 Aligned_cols=290 Identities=13% Similarity=0.048 Sum_probs=165.8
Q ss_pred cccceee-----cC-CCCeEEEEEeecccccccCCceeEEEEEcCCCC-------e-eeccCCCCccccceeeeeEEecC
Q 004475 32 KINFVSW-----SP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------A-KPLFESPDICLNAVFGSFVWVNN 97 (751)
Q Consensus 32 ~~~~p~~-----SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-------~-~~lt~~~~~~~~~~~~~~~wspD 97 (751)
.+...+| +| ||+.||..+. + ..|.++++..++ . +.+..... .+..++|+||
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~--------D--~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSR--------D--KTVMIWKLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEET--------T--SCEEEEEECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhheeeEEEeecCCCCCEEEEEcC--------C--CEEEEEECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 5677788 77 9999887542 3 455555654432 1 12221111 3678999999
Q ss_pred CcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-
Q 004475 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP- 174 (751)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~- 174 (751)
++.|+..+.+ ..|.++|+ +|+ ...+..+
T Consensus 88 ~~~l~s~s~D-------------------------------------------------~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSSWD-------------------------------------------------KTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEETT-------------------------------------------------SEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCC-------------------------------------------------CcEEEEECCCCcEEEEEcCCC
Confidence 9988876442 46788888 664 3455545
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~ 254 (751)
..+..++|+|||++|+..+.+ ..+.+||+.+.....+.... .....+..+.|+|+++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAE-------------REIKLWNILGECKFSSAEKE----------NHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETT-------------SCEEEEESSSCEEEECCTTT----------SCSSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCC-------------CEEEEEeccCCceeeeeccc----------CCCceeeeeeeccccc
Confidence 778899999999998876543 35889998754333221110 1122356789999884
Q ss_pred ---------ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeeccccee
Q 004475 255 ---------STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTR 324 (751)
Q Consensus 255 ---------~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~ 324 (751)
..++..+ ..+.|.+++.. ......+......+. ++|+|||++|+..+. ...
T Consensus 176 ~~~~~~~~~~~l~s~~------------~d~~i~iwd~~---~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~ 236 (343)
T 2xzm_R 176 SANKVQPFAPYFASVG------------WDGRLKVWNTN---FQIRYTFKAHESNVNHLSISPNGKYIATGGK----DKK 236 (343)
T ss_dssp SCSCCCSSCCEEEEEE------------TTSEEEEEETT---TEEEEEEECCSSCEEEEEECTTSSEEEEEET----TCE
T ss_pred cccccCCCCCEEEEEc------------CCCEEEEEcCC---CceeEEEcCccccceEEEECCCCCEEEEEcC----CCe
Confidence 2133332 23577888753 323334444556677 999999999887652 235
Q ss_pred EEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCC
Q 004475 325 TWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 404 (751)
Q Consensus 325 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 404 (751)
|.+.++... .......... ..+.. ++|+||++.|+... + ..+.+|++.++
T Consensus 237 v~iwd~~~~-~~~~~~~~~~-~~v~~------v~~sp~~~~la~~~-d---------------------~~v~iw~~~~~ 286 (343)
T 2xzm_R 237 LLIWDILNL-TYPQREFDAG-STINQ------IAFNPKLQWVAVGT-D---------------------QGVKIFNLMTQ 286 (343)
T ss_dssp EEEEESSCC-SSCSEEEECS-SCEEE------EEECSSSCEEEEEE-S---------------------SCEEEEESSSC
T ss_pred EEEEECCCC-cccceeecCC-CcEEE------EEECCCCCEEEEEC-C---------------------CCEEEEEeCCC
Confidence 556666332 1112222111 11222 88999998776544 1 15788888776
Q ss_pred ceeEEeeccch--hhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 405 SKERIWESNRE--KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 405 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
+...+...... ...............++|+|||+.|+... . -+.+.++++.+|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~-~---Dg~v~~w~~~~g 341 (343)
T 2xzm_R 287 SKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF-T---DGVIRTFSFETS 341 (343)
T ss_dssp CSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE-T---TSEEEEEEEEEE
T ss_pred CCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec-C---CceEEEEEEEcc
Confidence 54332111100 00000000011112368999999877543 2 245777776543
No 254
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.57 E-value=4.7e-14 Score=144.30 Aligned_cols=212 Identities=16% Similarity=0.092 Sum_probs=134.6
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
+|..+.+...-+ ++.|.||++||.+. +...|. .....|+ ..|.|++ +|.+|+|
T Consensus 15 ~g~~l~y~~~G~--------g~~~pvvllHG~~~-----------~~~~w~----~~~~~L~-~~~~via---~Dl~G~G 67 (316)
T 3afi_E 15 LGSSMAYRETGA--------QDAPVVLFLHGNPT-----------SSHIWR----NILPLVS-PVAHCIA---PDLIGFG 67 (316)
T ss_dssp TTEEEEEEEESC--------TTSCEEEEECCTTC-----------CGGGGT----TTHHHHT-TTSEEEE---ECCTTST
T ss_pred CCEEEEEEEeCC--------CCCCeEEEECCCCC-----------chHHHH----HHHHHHh-hCCEEEE---ECCCCCC
Confidence 566666655432 12358999999641 112222 2234444 4599999 6777888
Q ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC---CCCc--
Q 004475 570 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK---TLTP-- 642 (751)
Q Consensus 570 ~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~---~~~~-- 642 (751)
.+... ........+|+.++++.+ +.+++.|+||||||.+|+.+|.++|++++++|+.++.... ....
T Consensus 68 ~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 141 (316)
T 3afi_E 68 QSGKPDIAYRFFDHVRYLDAFIEQR------GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHT 141 (316)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc------CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccch
Confidence 87543 223556677777776654 2368999999999999999999999999999998863210 0000
Q ss_pred ------------------cCccc------------------c-cccch--hhHHHHHh-----------------cCc--
Q 004475 643 ------------------FGFQT------------------E-FRTLW--EATNVYIE-----------------MSP-- 664 (751)
Q Consensus 643 ------------------~~~~~------------------~-~~~~~--~~~~~~~~-----------------~~~-- 664 (751)
..... . ..... ...+.+.. ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (316)
T 3afi_E 142 EVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAG 221 (316)
T ss_dssp CCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTT
T ss_pred hhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccc
Confidence 00000 0 00000 00000100 000
Q ss_pred ------------ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHH
Q 004475 665 ------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 732 (751)
Q Consensus 665 ------------~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 732 (751)
...+.++++|+|+++|++|..+| ...++.+.+.++ ..++++++++||... .+....+.+.+
T Consensus 222 ~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~i 294 (316)
T 3afi_E 222 EPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRSV 294 (316)
T ss_dssp BSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHHH
Confidence 01123578999999999999998 777777766553 468999999999876 56678899999
Q ss_pred HHHHHHHhc
Q 004475 733 DRWLQKYCL 741 (751)
Q Consensus 733 ~~fl~~~l~ 741 (751)
.+||.+...
T Consensus 295 ~~fl~~~~~ 303 (316)
T 3afi_E 295 AGWIAGIEA 303 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhcCC
Confidence 999987654
No 255
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.57 E-value=4.9e-14 Score=140.57 Aligned_cols=243 Identities=15% Similarity=0.164 Sum_probs=143.5
Q ss_pred EEEEEEc-CCCceEEEEEEcCCCCCCC---CCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475 482 EMIKYQR-KDGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 557 (751)
Q Consensus 482 e~i~~~~-~~~~~i~~~~~~P~~~~~~---~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 557 (751)
.++++.+ .-+..+...+|+|+++... +++++|+|+++||.+ ++...|.... .....+.+.|.++
T Consensus 15 ~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~-----------~~~~~w~~~~-~~~~~~~~~~~~~ 82 (299)
T 4fol_A 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT-----------CTPDNASEKA-FWQFQADKYGFAI 82 (299)
T ss_dssp EEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTT-----------CCHHHHHHHS-CHHHHHHHHTCEE
T ss_pred EEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCC-----------CChHHHHHhc-hHhHHHHHcCchh
Confidence 4445554 3466899999999887532 345799999999963 2212221111 1223445678888
Q ss_pred EEcCCCCC----C---------CCCCCC----------CCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeCh
Q 004475 558 LAGPSIPI----I---------GEGDKL----------PNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSY 610 (751)
Q Consensus 558 ~~~~~~~~----~---------g~g~~~----------~~~~~~~~~~~d~~~~v~~l~~----~~~id~~~i~l~G~S~ 610 (751)
+.++.... . |.+... ....+...+.+++...|+.--. +...++++.+|.||||
T Consensus 83 v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SM 162 (299)
T 4fol_A 83 VFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISM 162 (299)
T ss_dssp EEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTH
T ss_pred hccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCc
Confidence 87443111 0 111100 0112344555655555543221 1123457899999999
Q ss_pred HHHHHHHHHHhC--CCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCccccc---CCC-CCCEEEEEcCCCC
Q 004475 611 GAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA---NKI-KKPILIIHGEVDD 684 (751)
Q Consensus 611 GG~~a~~~a~~~--p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~P~li~~G~~D~ 684 (751)
||+.|+.++.++ |+.+.++.+.+|..+....++...............+..+++...+ .+. ..++++-+|+.|.
T Consensus 163 GG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~ 242 (299)
T 4fol_A 163 GGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDP 242 (299)
T ss_dssp HHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETTCT
T ss_pred hHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCCCc
Confidence 999999999985 6788999999998765443332211111111112222333333222 222 3679999999998
Q ss_pred CCCCChH-HHHHHHHHHHhCCCc--EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 685 KVGLFPM-QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 685 ~vp~~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+.+ .. ....+.+++++++.+ ++++..||.+|.+.. +..++++-+.|..++|+
T Consensus 243 f~~--~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 243 FLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp THH--HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred chh--hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 753 11 135688888887765 789999998998654 55777888999988875
No 256
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.57 E-value=6.1e-14 Score=130.53 Aligned_cols=169 Identities=11% Similarity=-0.027 Sum_probs=111.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe---EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~ 588 (751)
.|+||++||.+. +...| ..+...|.++|| .|++ .+.+|+|.+.. ....+..+++..+
T Consensus 3 ~~~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~~~~v~~---~d~~g~g~s~~--~~~~~~~~~~~~~ 62 (181)
T 1isp_A 3 HNPVVMVHGIGG-----------ASFNF----AGIKSYLVSQGWSRDKLYA---VDFWDKTGTNY--NNGPVLSRFVQKV 62 (181)
T ss_dssp CCCEEEECCTTC-----------CGGGG----HHHHHHHHHTTCCGGGEEE---CCCSCTTCCHH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCcCC-----------CHhHH----HHHHHHHHHcCCCCccEEE---EecCCCCCchh--hhHHHHHHHHHHH
Confidence 478999999641 11112 245667888998 5888 45556665421 1222333333333
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCccc
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPIT 666 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (751)
++.+ +..+++++||||||.+++.++.++ |++++++|++++......... +. .
T Consensus 63 ~~~~------~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~-~~-------------------~ 116 (181)
T 1isp_A 63 LDET------GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA-LP-------------------G 116 (181)
T ss_dssp HHHH------CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC-CC-------------------C
T ss_pred HHHc------CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc-CC-------------------C
Confidence 3322 346899999999999999999987 889999999998743211100 00 0
Q ss_pred ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 667 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 667 ~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
.....++|+|+++|++|..+| +..++ -...+++++++++|.+.... .++.+.+.+||.+.
T Consensus 117 ~~~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 TDPNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLLYS--SQVNSLIKEGLNGG 176 (181)
T ss_dssp SCTTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGGGC--HHHHHHHHHHHTTT
T ss_pred CCCccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhccC--HHHHHHHHHHHhcc
Confidence 011235899999999999998 65321 23468999999999976433 36888889998764
No 257
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.57 E-value=9.9e-14 Score=140.78 Aligned_cols=209 Identities=16% Similarity=0.062 Sum_probs=132.8
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+....+- ..|+||++||.+. +...|. .....|+++ |.|++ ++.+|+
T Consensus 17 ~~g~~l~~~~~g----------~~~~vv~lHG~~~-----------~~~~~~----~~~~~L~~~-~~vi~---~D~~G~ 67 (301)
T 3kda_A 17 VDGVKLHYVKGG----------QGPLVMLVHGFGQ-----------TWYEWH----QLMPELAKR-FTVIA---PDLPGL 67 (301)
T ss_dssp ETTEEEEEEEEE----------SSSEEEEECCTTC-----------CGGGGT----TTHHHHTTT-SEEEE---ECCTTS
T ss_pred eCCeEEEEEEcC----------CCCEEEEECCCCc-----------chhHHH----HHHHHHHhc-CeEEE---EcCCCC
Confidence 467777766653 1478999999752 112222 335566666 99999 566677
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc--
Q 004475 569 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-- 643 (751)
Q Consensus 569 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~-- 643 (751)
|.+... .....+..+|+.++++.+ +.++ +.++||||||.+|+.++.++|++++++|++++.........
T Consensus 68 G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (301)
T 3kda_A 68 GQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFP 141 (301)
T ss_dssp TTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSB
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchh
Confidence 776433 234566777777777766 2346 99999999999999999999999999999998532110000
Q ss_pred ---------Cc--------cccc---------------------ccchhhH---HHH-----------------Hh----
Q 004475 644 ---------GF--------QTEF---------------------RTLWEAT---NVY-----------------IE---- 661 (751)
Q Consensus 644 ---------~~--------~~~~---------------------~~~~~~~---~~~-----------------~~---- 661 (751)
.+ .... ...+... +.+ ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (301)
T 3kda_A 142 AFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNES 221 (301)
T ss_dssp SEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHH
T ss_pred hhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccc
Confidence 00 0000 0000000 000 00
Q ss_pred ----cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 662 ----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 662 ----~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
......+.++++|+|+++|++| ++ ...+..+ .+.-..+++++++++||... .+..+.+.+.+.+|+.
T Consensus 222 ~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l~ 292 (301)
T 3kda_A 222 VRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQM----KAYAEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFLS 292 (301)
T ss_dssp HHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHHH----HTTBSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHHT
T ss_pred hhhcccchhhccccCcceEEEecCCC--CC--hhHHHHH----HhhcccCeEEEcCCCCcCch-hhCHHHHHHHHHHHHh
Confidence 0001122378999999999999 44 4554444 33335689999999999875 5667788888888887
Q ss_pred HHhc
Q 004475 738 KYCL 741 (751)
Q Consensus 738 ~~l~ 741 (751)
+.-+
T Consensus 293 ~~~~ 296 (301)
T 3kda_A 293 RGRH 296 (301)
T ss_dssp TSCC
T ss_pred hCch
Confidence 6543
No 258
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.57 E-value=2.6e-14 Score=145.24 Aligned_cols=210 Identities=10% Similarity=-0.043 Sum_probs=133.7
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+....+-+ .|+||++||.+.. ...|.. ....|+ +.|.|++ ++.+|+
T Consensus 16 ~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~~~----~~~~L~-~~~~vi~---~D~~G~ 66 (302)
T 1mj5_A 16 IKGRRMAYIDEGT----------GDPILFQHGNPTS-----------SYLWRN----IMPHCA-GLGRLIA---CDLIGM 66 (302)
T ss_dssp ETTEEEEEEEESC----------SSEEEEECCTTCC-----------GGGGTT----TGGGGT-TSSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcCC----------CCEEEEECCCCCc-----------hhhhHH----HHHHhc-cCCeEEE---EcCCCC
Confidence 4677776655421 3789999997521 122222 122333 4479999 566677
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475 569 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 641 (751)
Q Consensus 569 g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~id~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~ 641 (751)
|.+.... ....+..+|+.++++.+ +. .+++++|||+||.+|+.++.++|++++++|++++.......
T Consensus 67 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (302)
T 1mj5_A 67 GDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEW 140 (302)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCG
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhh
Confidence 7764432 23556667776666654 23 68999999999999999999999999999999986531100
Q ss_pred c-cC--c---------cc----------ccc--------cch----------------hhHHHH----Hhc---------
Q 004475 642 P-FG--F---------QT----------EFR--------TLW----------------EATNVY----IEM--------- 662 (751)
Q Consensus 642 ~-~~--~---------~~----------~~~--------~~~----------------~~~~~~----~~~--------- 662 (751)
. .. . .. ... ... .....+ ...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (302)
T 1mj5_A 141 ADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV 220 (302)
T ss_dssp GGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHH
T ss_pred hhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhh
Confidence 0 00 0 00 000 000 000000 000
Q ss_pred -----CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 663 -----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 663 -----~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
.....+.++++|+|+++|++|..+| +..++.+.+.+ .. +++++ +++|... .+....+.+.+.+||.
T Consensus 221 ~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~fl~ 291 (302)
T 1mj5_A 221 VAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAAFVR 291 (302)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHHHHH
Confidence 1123456789999999999999998 77666555433 34 78888 9999876 5668899999999999
Q ss_pred HHhcC
Q 004475 738 KYCLS 742 (751)
Q Consensus 738 ~~l~~ 742 (751)
.....
T Consensus 292 ~~~~~ 296 (302)
T 1mj5_A 292 RLRPA 296 (302)
T ss_dssp HHSCC
T ss_pred hhccc
Confidence 87653
No 259
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.56 E-value=2.6e-14 Score=142.08 Aligned_cols=209 Identities=16% Similarity=0.119 Sum_probs=126.9
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 569 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g 569 (751)
+|..+....+-+++ .|+||++||.+. +...|. .....| .++|.|++ ++.+|+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~-----------~~~~~~----~~~~~L-~~~~~v~~---~D~~G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQ-----------DHRLFK----NLAPLL-ARDFHVIC---PDWRGHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTC-----------CGGGGT----THHHHH-TTTSEEEE---ECCTTCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCC-----------cHhHHH----HHHHHH-HhcCcEEE---EccccCC
Confidence 55566655554422 479999999642 111221 233444 55699999 5666777
Q ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCCCcc---
Q 004475 570 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLTPF--- 643 (751)
Q Consensus 570 ~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~~~~--- 643 (751)
.+... .....+..+|+.++++.+ +..++.++||||||.+|+.+|.++ |++++++|++++... ....+
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~-~~~~~~~~ 132 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQ-PHPGFWQQ 132 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSS-CCHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCC-cChhhcch
Confidence 76532 234566677777766654 335899999999999999999999 999999999998651 10000
Q ss_pred --------Ccccc---cccch-------------------hhHHHHH------------hcCcccccCCCCCCEEEEEcC
Q 004475 644 --------GFQTE---FRTLW-------------------EATNVYI------------EMSPITHANKIKKPILIIHGE 681 (751)
Q Consensus 644 --------~~~~~---~~~~~-------------------~~~~~~~------------~~~~~~~~~~~~~P~li~~G~ 681 (751)
..... ....| .....+. .......+.++++|+|++||.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~ 212 (264)
T 3ibt_A 133 LAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIY 212 (264)
T ss_dssp HHHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEE
T ss_pred hhcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEec
Confidence 00000 00000 0000000 011224567889999999875
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 682 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 682 ~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
.|...+.+....+.+. +.-...+++++++++|... .+....+.+.+.+||+
T Consensus 213 ~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 213 SQPLSQDYRQLQLEFA----AGHSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CCSCCHHHHHHHHHHH----HHCTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHHHHH----HhCCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 5443320033333333 3334579999999999765 5667788888888875
No 260
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.56 E-value=1.7e-12 Score=139.84 Aligned_cols=176 Identities=9% Similarity=0.114 Sum_probs=100.9
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-CceeeeeccCCCCCCCCCccCCccCCCceeeeecCC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG 253 (751)
..+..++|+|||++|+.. . ...+.+||+. ++....+.... +..+......+..++|+|+|
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~-------------d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-D-------------DLRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-C-------------SSEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-C-------------CCeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCC
Confidence 667899999999988864 2 2368899998 33332221110 11122233456789999999
Q ss_pred CceEEEEEeccCCCCccccCcccceeeccCCCCCCCC-----ceEeEeece------------eEE-EEEecCCceEEEe
Q 004475 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-----PEILHKLDL------------RFS-VSWCDDSLALVNE 315 (751)
Q Consensus 254 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~l~~~~~------------~~~-~~~spdg~~l~~~ 315 (751)
..+|+..+ ..+.|.++++. ... ...+..... .+. +.|+|||+.|+..
T Consensus 239 ~~~l~s~~------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 239 CNTFVYSS------------SKGTIRLCDMR---ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp TTEEEEEE------------TTSCEEEEETT---TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEe------------CCCeEEEEECc---CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 44255543 23578888875 222 233433332 567 9999999998865
Q ss_pred eeecccceeEEEecCCCCCCcceeeeecccccc--------cCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCC
Q 004475 316 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV--------YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGF 387 (751)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~ 387 (751)
.. ..|.+.++.........+........ ........++|+|||++|+..+.+
T Consensus 304 ~~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d--------------- 363 (447)
T 3dw8_B 304 DY-----LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN--------------- 363 (447)
T ss_dssp ES-----SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST---------------
T ss_pred eC-----CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC---------------
Confidence 52 35666666542021222221110000 000001116899999999776632
Q ss_pred CCCCCCceeEEEecCCCceeEEe
Q 004475 388 TPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 388 ~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
..|++||+.+++...+.
T Consensus 364 ------g~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 364 ------NFFRMFDRNTKRDITLE 380 (447)
T ss_dssp ------TEEEEEETTTCCEEEEE
T ss_pred ------CEEEEEEcCCCcceeee
Confidence 37889999888765543
No 261
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.56 E-value=4.1e-15 Score=145.98 Aligned_cols=208 Identities=12% Similarity=0.054 Sum_probs=121.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCC------------------CCCCCCC
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII------------------GEGDKLP 573 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~------------------g~g~~~~ 573 (751)
.|+||++||.+. +...|......+...|..+||.|+.++.+... |+|....
T Consensus 5 ~~~vl~lHG~g~-----------~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 73 (243)
T 1ycd_A 5 IPKLLFLHGFLQ-----------NGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRA 73 (243)
T ss_dssp CCEEEEECCTTC-----------CHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEE
T ss_pred CceEEEeCCCCc-----------cHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcc
Confidence 689999999642 11222111113444566679999996654100 2222100
Q ss_pred -CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC------CceeEEEEccCCCCCCCCccCcc
Q 004475 574 -NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNKTLTPFGFQ 646 (751)
Q Consensus 574 -~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p------~~~~~~v~~~~~~d~~~~~~~~~ 646 (751)
..........|+.++++++.+....+..+|+|+||||||.+|+.++.+.+ ..+++++++++........ ...
T Consensus 74 w~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~~ 152 (243)
T 1ycd_A 74 WFYHSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EHP 152 (243)
T ss_dssp SSCCCSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TST
T ss_pred cccCCCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-ccc
Confidence 00000011344555666655432223468999999999999999998752 2467788777764311000 000
Q ss_pred cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC---CcEEEEEeCCCCCcCCccc
Q 004475 647 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG---ALSRLVLLPFEHHVYAARE 723 (751)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~ 723 (751)
.. ..+. ..+. .....+.++++|+|++||++|.++| +..++++++.+...+ ......++++++|.+...
T Consensus 153 ~~--~~~~--~~~~--~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~- 223 (243)
T 1ycd_A 153 GE--LRIT--EKFR--DSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK- 223 (243)
T ss_dssp TC--EEEC--GGGT--TTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC-
T ss_pred cc--cccc--hhHH--HhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch-
Confidence 00 0000 0010 1122356688999999999999999 999999999887641 112344566789987532
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 004475 724 NVMHVIWETDRWLQKYCLS 742 (751)
Q Consensus 724 ~~~~~~~~~~~fl~~~l~~ 742 (751)
..+.+.+.+||++++.+
T Consensus 224 --~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 224 --KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp --HHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHHHHHhhhh
Confidence 35889999999998864
No 262
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.56 E-value=5.4e-13 Score=138.90 Aligned_cols=299 Identities=8% Similarity=0.003 Sum_probs=171.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecC---CcEEEEeecCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN---STLLIFTIPSS 108 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD---g~~l~~~~~~~ 108 (751)
.+...+|||||++++.+...+ .+...|.++++.+++...+..... ...+..++|+|+ |+.|+....+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~d- 89 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDFG- 89 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEETT-
T ss_pred ceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecCC-
Confidence 688999999999888765210 135788999998887655432111 114778999999 6888877432
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC--ceecCCC-ceEEee----
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGTP-AVYTAV---- 180 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~--~~~lt~~-~~~~~~---- 180 (751)
..|.++++ +++ ...+..+ ..+..+
T Consensus 90 ------------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 90 ------------------------------------------------GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ------------------------------------------------SCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ------------------------------------------------CeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 46777787 443 4445444 555555
Q ss_pred --eeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce--eeeeccCCCCCCCCCccCCccCCCceee----eecC
Q 004475 181 --EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSIS----WRAD 252 (751)
Q Consensus 181 --~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~spd 252 (751)
+|+|||+.|+....+ ..+.+||+.++. ...+....... ...+..+. |+|+
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGEN---------KRDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSC---------CCCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCC---------CCceEEEEEEeccCCC
Confidence 679999998876543 358899998654 23332222110 11233445 8999
Q ss_pred CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEec---CCceEEEeeeecccceeEEEe
Q 004475 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCD---DSLALVNETWYKTSQTRTWLV 328 (751)
Q Consensus 253 G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~sp---dg~~l~~~~~~~~~~~~l~~~ 328 (751)
++. ++... ..+.|+++++. .............+. +.|+| +++.|+.+.. ...|.++
T Consensus 180 ~~~-l~~~~------------~d~~i~i~d~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----dg~i~i~ 239 (357)
T 3i2n_A 180 ERV-VCAGY------------DNGDIKLFDLR---NMALRWETNIKNGVCSLEFDRKDISMNKLVATSL----EGKFHVF 239 (357)
T ss_dssp CCE-EEEEE------------TTSEEEEEETT---TTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES----TTEEEEE
T ss_pred CCE-EEEEc------------cCCeEEEEECc---cCceeeecCCCCceEEEEcCCCCCCCCEEEEECC----CCeEEEE
Confidence 997 55543 23588999985 334444445566677 99999 9998887652 2345555
Q ss_pred cCCCCCCcceeee----ecccccccCCCCCCCeeeCCCCC-EEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCC
Q 004475 329 CPGSKDVAPRVLF----DRVFENVYSDPGSPMMTRTSTGT-NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 403 (751)
Q Consensus 329 ~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~spDG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 403 (751)
++.++ .....+. ......+.. ++|+|||+ .|+..+. ...|++||+.+
T Consensus 240 d~~~~-~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~l~~~~~---------------------dg~i~iwd~~~ 291 (357)
T 3i2n_A 240 DMRTQ-HPTKGFASVSEKAHKSTVWQ------VRHLPQNRELFLTAGG---------------------AGGLHLWKYEY 291 (357)
T ss_dssp EEEEE-ETTTEEEEEEEECCSSCEEE------EEEETTEEEEEEEEET---------------------TSEEEEEEEEC
T ss_pred eCcCC-CcccceeeeccCCCcCCEEE------EEECCCCCcEEEEEeC---------------------CCcEEEeecCC
Confidence 55443 1111111 112222222 78999998 4555442 22677778765
Q ss_pred CceeEEeeccch-h----hhhceeee---ecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 404 GSKERIWESNRE-K----YFETAVAL---VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 404 g~~~~l~~~~~~-~----~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
+........++. . .......+ ......++|+|||+.|+++... -+.+.++++.+.
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 292 PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET---TSEEEEEEECC-
T ss_pred CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC---CCcEEEEECCCc
Confidence 543221111000 0 00000000 1111236899999999876543 246888887653
No 263
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.55 E-value=4.3e-13 Score=143.34 Aligned_cols=235 Identities=9% Similarity=0.027 Sum_probs=149.4
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
...++|||||++|+.... ...|+++++.+++..+...... ......|+|||+.|+..+.+
T Consensus 59 ~~~~~~s~~g~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~d----- 118 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARL----------DGHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTTE----- 118 (420)
T ss_dssp CTTCEEEEEETTEEEEEE----------TTEEEEEECCSEETTTTSCSCC-----EEEEEEECSSSCEEEEEETT-----
T ss_pred ccceeeeecCCeEEEEEc----------CCcEEEEEecccceeeEEecCC-----ceEEEEEecCCCEEEEEECC-----
Confidence 357899999999998642 3688888988776555433332 24455799999999887442
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceec-CCC-ceEEeeeeCCCCceE
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-GTP-AVYTAVEPSPDQKYV 189 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~l-t~~-~~~~~~~~SpDG~~i 189 (751)
..|.++++ +++.... ..+ ..+..++|+|||++|
T Consensus 119 --------------------------------------------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 119 --------------------------------------------GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp --------------------------------------------SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred --------------------------------------------CCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 46777888 5544444 344 788999999999988
Q ss_pred EEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
+..+.+ ..+.+||+.+++. ..+.. ....+..++|+|||+. |+..+
T Consensus 155 ~s~s~d-------------~~i~iwd~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~-l~s~~------- 200 (420)
T 3vl1_A 155 ISSSQD-------------MQLKIWSVKDGSNPRTLIG-------------HRATVTDIAIIDRGRN-VLSAS------- 200 (420)
T ss_dssp EEEETT-------------SEEEEEETTTCCCCEEEEC-------------CSSCEEEEEEETTTTE-EEEEE-------
T ss_pred EEEeCC-------------CeEEEEeCCCCcCceEEcC-------------CCCcEEEEEEcCCCCE-EEEEc-------
Confidence 876543 3689999986543 33321 2234668999999997 55543
Q ss_pred ccccCcccceeeccCCCCCCCCc-eEeEe------------------------eceeEE-EEEecCCceEEEeeeecccc
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKP-EILHK------------------------LDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~-~~l~~------------------------~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
..+.|.++++. .+.. ..+.. ....+. +.|+|||+.|+.+.. .
T Consensus 201 -----~d~~v~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d 268 (420)
T 3vl1_A 201 -----LDGTIRLWECG---TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----S 268 (420)
T ss_dssp -----TTSCEEEEETT---TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET----T
T ss_pred -----CCCcEEEeECC---CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC----C
Confidence 22467777764 2211 11111 012233 567899998877652 2
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCC-EEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT-NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 401 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 401 (751)
..|.++++.++ .....+.......+.. ++|+|+|+ .|+..+. ...|++||+
T Consensus 269 g~i~i~d~~~~-~~~~~~~~~~~~~v~~------~~~~~~~~~~l~~g~~---------------------dg~i~vwd~ 320 (420)
T 3vl1_A 269 GVITVHNVFSK-EQTIQLPSKFTCSCNS------LTVDGNNANYIYAGYE---------------------NGMLAQWDL 320 (420)
T ss_dssp SCEEEEETTTC-CEEEEECCTTSSCEEE------EEECSSCTTEEEEEET---------------------TSEEEEEET
T ss_pred CeEEEEECCCC-ceeEEcccccCCCcee------EEEeCCCCCEEEEEeC---------------------CCeEEEEEc
Confidence 35677777664 2222222222222222 88999999 6666652 237899999
Q ss_pred CCCc
Q 004475 402 NTGS 405 (751)
Q Consensus 402 ~~g~ 405 (751)
.+++
T Consensus 321 ~~~~ 324 (420)
T 3vl1_A 321 RSPE 324 (420)
T ss_dssp TCTT
T ss_pred CCCc
Confidence 8764
No 264
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.55 E-value=3.5e-13 Score=136.31 Aligned_cols=206 Identities=12% Similarity=0.006 Sum_probs=126.8
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.....- + .|.||++||.+. ....| ......|++ .|.|++ +|.+|+
T Consensus 16 ~~g~~l~y~~~G--~--------g~~lvllHG~~~--------------~~~~w-~~~~~~L~~-~~~via---~Dl~G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG--A--------GPTLLLLHGWPG--------------FWWEW-SKVIGPLAE-HYDVIV---PDLRGF 66 (294)
T ss_dssp CSSCEEEEEEEE--C--------SSEEEEECCSSC--------------CGGGG-HHHHHHHHT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC--C--------CCEEEEECCCCc--------------chhhH-HHHHHHHhh-cCEEEe---cCCCCC
Confidence 466677665542 1 368999999641 11111 123345554 499999 677788
Q ss_pred CCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc
Q 004475 569 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 642 (751)
Q Consensus 569 g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~ 642 (751)
|.+.... .......+|+.++++.+ ..+++.++||||||.+|+.+|.++|++++++|++++........
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc------CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 8875542 23456667666666654 23589999999999999999999999999999998632110000
Q ss_pred ----------cC--c-----c-----ccc-----------------ccchhh--HHHHH-----------------hc--
Q 004475 643 ----------FG--F-----Q-----TEF-----------------RTLWEA--TNVYI-----------------EM-- 662 (751)
Q Consensus 643 ----------~~--~-----~-----~~~-----------------~~~~~~--~~~~~-----------------~~-- 662 (751)
+. + . ... ...+.. .+.+. ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR 220 (294)
T ss_dssp --------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS
T ss_pred hccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh
Confidence 00 0 0 000 000000 00010 00
Q ss_pred Cccc-----ccCCCCCCEEEEEcCCCCCCCCCh-HHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 663 SPIT-----HANKIKKPILIIHGEVDDKVGLFP-MQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 663 ~~~~-----~~~~~~~P~li~~G~~D~~vp~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
.... .+.++++|+|+++|++|..+| . .....+.+.+ ..+++++++++||... .+..+.+.+.+.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKYY----SNYTMETIEDCGHFLM-VEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHHB----SSEEEEEETTCCSCHH-HHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHHc----CCCceEEeCCCCCChh-hhCHHHHHHHHHHHh
Confidence 0000 123789999999999999876 4 3344443332 3579999999999865 566778888888886
No 265
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.55 E-value=6.4e-14 Score=142.44 Aligned_cols=196 Identities=15% Similarity=0.085 Sum_probs=123.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC--CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 589 (751)
.|.||++||.+. +...| ......|+++ ||.|++ ++.+|+|.+.... ...++++.+.+
T Consensus 36 ~~~vvllHG~~~-----------~~~~~----~~~~~~L~~~~~g~~vi~---~D~~G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFD-----------SSYSF----RHLLEYINETHPGTVVTV---LDLFDGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTC-----------CGGGG----HHHHHHHHHHSTTCCEEE---CCSSCSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------ChhHH----HHHHHHHHhcCCCcEEEE---eccCCCccchhhH---HHHHHHHHHHH
Confidence 578999999641 11111 2455677777 999999 5666777654332 23455555666
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCCCCCCCccCc-----cc----------------
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLTPFGF-----QT---------------- 647 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~d~~~~~~~~-----~~---------------- 647 (751)
..+.+.. ..++.++||||||.+|+.++.++|+ +++++|++++........... ..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGG
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHH
Confidence 5555443 3689999999999999999999999 799999998764322110000 00
Q ss_pred --ccccchhh---HHHHHhcC-----------------cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHH-------
Q 004475 648 --EFRTLWEA---TNVYIEMS-----------------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD------- 698 (751)
Q Consensus 648 --~~~~~~~~---~~~~~~~~-----------------~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~------- 698 (751)
.....|.. .+.+.... ....+.+++ |+|+++|++|.++| +..+..+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~~ 248 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANETV 248 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCCE
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCcccc
Confidence 00000000 01110000 123456788 99999999999998 776655532
Q ss_pred -----------------HHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 699 -----------------ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 699 -----------------~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
.+... .+++++++++++|... .+..+.+.+.+.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 249 LEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp ECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred cchhhhhhhhhhhhchhhHhhc-CCeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 12222 2489999999999876 556677777777775
No 266
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.55 E-value=5.8e-14 Score=141.48 Aligned_cols=213 Identities=13% Similarity=0.086 Sum_probs=129.0
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCc-cCC-CCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSG-MTPTSSLIFLARRFAVLAGPSIPIIG 567 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~G~~v~~~~~~~~~g 567 (751)
++.++....+-+++ ...|+||++||.+... .. +.. +.......|+ ++|.|++ ++.+|
T Consensus 19 ~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~-----------~~~~~~~~~~~~~~~L~-~~~~vi~---~D~~G 77 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK------PKRPAIFTYHDVGLNY-----------KSCFQPLFRFGDMQEII-QNFVRVH---VDAPG 77 (286)
T ss_dssp TTEEEEEEEESCCC------TTCCEEEEECCTTCCH-----------HHHHHHHHTSHHHHHHH-TTSCEEE---EECTT
T ss_pred CCeEEEEEeccCCC------CCCCeEEEeCCCCCCc-----------hhhhhhhhhhchhHHHh-cCCCEEE---ecCCC
Confidence 56677777665432 1258999999964110 10 110 0001333444 5799999 45556
Q ss_pred CCCCCC--Cch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475 568 EGDKLP--NDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 641 (751)
Q Consensus 568 ~g~~~~--~~~----~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~ 641 (751)
+|.+.. ... ...+..+|+.++++.+ +..++.++||||||.+|+.++.++|++++++|++++.......
T Consensus 78 ~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 151 (286)
T 2qmq_A 78 MEEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW 151 (286)
T ss_dssp TSTTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCH
T ss_pred CCCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccch
Confidence 654321 211 4566777777777766 2358999999999999999999999999999999986432110
Q ss_pred cc-----------C---------ccccc----ccchhh-------------HHHHH----hcCc----ccccCCCCCCEE
Q 004475 642 PF-----------G---------FQTEF----RTLWEA-------------TNVYI----EMSP----ITHANKIKKPIL 676 (751)
Q Consensus 642 ~~-----------~---------~~~~~----~~~~~~-------------~~~~~----~~~~----~~~~~~~~~P~l 676 (751)
.. . +.... ...... ...+. .... ...+.++++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 231 (286)
T 2qmq_A 152 MDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVM 231 (286)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEE
T ss_pred hhhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEE
Confidence 00 0 00000 000000 00000 0011 123567899999
Q ss_pred EEEcCCCCCCCCChHHHHHHHHHHHhCCC-cEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 677 IIHGEVDDKVGLFPMQAERFFDALKGHGA-LSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 677 i~~G~~D~~vp~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
+++|++|..+| . . .+.+..... .++++++++++|... .+....+.+.+.+||.
T Consensus 232 ii~G~~D~~~~--~-~----~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 232 LVVGDQAPHED--A-V----VECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEEETTSTTHH--H-H----HHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred EEecCCCcccc--H-H----HHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 99999999874 2 2 333344333 689999999999875 4557788888899884
No 267
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.55 E-value=1.5e-12 Score=152.06 Aligned_cols=243 Identities=12% Similarity=0.072 Sum_probs=155.2
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|.+|++.+ |+...... .....+..++|||||++||... ..+.|.++++.+++..........
T Consensus 35 g~v~iwd~~~----~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~~- 98 (814)
T 3mkq_A 35 GRVEIWNYET----QVEVRSIQ-VTETPVRAGKFIARKNWIIVGS----------DDFRIRVFNYNTGEKVVDFEAHPD- 98 (814)
T ss_dssp SEEEEEETTT----TEEEEEEE-CCSSCEEEEEEEGGGTEEEEEE----------TTSEEEEEETTTCCEEEEEECCSS-
T ss_pred CEEEEEECCC----CceEEEEe-cCCCcEEEEEEeCCCCEEEEEe----------CCCeEEEEECCCCcEEEEEecCCC-
Confidence 4689999987 76544321 2233688999999999999963 346888999888875443322211
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
.+..++|+|||+.|+..+.+ ..|.++++
T Consensus 99 ---~v~~~~~s~~~~~l~~~~~d-------------------------------------------------g~i~vw~~ 126 (814)
T 3mkq_A 99 ---YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLWNW 126 (814)
T ss_dssp ---CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEEG
T ss_pred ---CEEEEEEeCCCCEEEEEcCC-------------------------------------------------CEEEEEEC
Confidence 37789999999999877432 46677777
Q ss_pred -CC-C-ceecCCC-ceEEeeeeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 165 -DG-T-AKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 165 -~G-~-~~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
++ . ...+..+ ..+..++|+| ||+.|+....+ ..+.+|++.++.........
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~----------- 182 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTG----------- 182 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-------------SEEEEEETTCSSCSEEEECC-----------
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCcceeEEecC-----------
Confidence 33 2 3344444 6788999999 88887776443 36889998765433221111
Q ss_pred ccCCCceeeeec--CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEee
Q 004475 240 VREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNET 316 (751)
Q Consensus 240 ~~~~~~~~~~sp--dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~ 316 (751)
....+..+.|+| ||+. ++... ..+.|.++++.. +.....+......+. +.|+|+|+.|+...
T Consensus 183 ~~~~v~~~~~~~~~~~~~-l~~~~------------~dg~i~~~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 183 QERGVNYVDYYPLPDKPY-MITAS------------DDLTIKIWDYQT--KSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp CTTCCCEEEECCSTTCCE-EEEEC------------TTSEEEEEETTT--TEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCCEEEEEEEECCCCCE-EEEEe------------CCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 113355789999 8887 55533 235788888751 223334444556677 99999999887765
Q ss_pred eecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEE
Q 004475 317 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 366 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l 366 (751)
. ...|.+.+..++ ............++. ++|+|+|+.+
T Consensus 248 ~----dg~v~vwd~~~~--~~~~~~~~~~~~v~~------~~~~~~~~~~ 285 (814)
T 3mkq_A 248 E----DGTLKIWNSSTY--KVEKTLNVGLERSWC------IATHPTGRKN 285 (814)
T ss_dssp T----TSCEEEEETTTC--SEEEEECCSSSSEEE------EEECTTCGGG
T ss_pred C----CCeEEEEECCCC--cEEEEeecCCCcEEE------EEEccCCCce
Confidence 2 235666777664 222222222222333 7899999854
No 268
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.55 E-value=2.1e-12 Score=133.84 Aligned_cols=256 Identities=11% Similarity=0.068 Sum_probs=146.8
Q ss_pred cceeEEeecCCCCCCC---Cc-ccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 4 FTGIGIHRLLPDDSLG---PE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g---~~-~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
...|.+|++......+ .. +.+. .....+...+|||||+.|+..+ ....|.++++.+++......
T Consensus 48 D~~v~iWd~~~~~~~~~~~~~~~~l~--~h~~~V~~~~~~~~~~~l~s~s----------~D~~v~lwd~~~~~~~~~~~ 115 (343)
T 2xzm_R 48 DKTVMIWKLYEEEQNGYFGIPHKALT--GHNHFVSDLALSQENCFAISSS----------WDKTLRLWDLRTGTTYKRFV 115 (343)
T ss_dssp TSCEEEEEECSSCCSSBSEEEEEEEC--CCSSCEEEEEECSSTTEEEEEE----------TTSEEEEEETTSSCEEEEEE
T ss_pred CCEEEEEECCcCCcccccccccchhc--cCCCceEEEEECCCCCEEEEEc----------CCCcEEEEECCCCcEEEEEc
Confidence 3468999997611111 11 1222 1223578899999999988753 34678888998887543322
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
+... .+..++|+|||+.|+..+.+ ..|
T Consensus 116 ~h~~----~v~~v~~sp~~~~l~s~~~d-------------------------------------------------~~i 142 (343)
T 2xzm_R 116 GHQS----EVYSVAFSPDNRQILSAGAE-------------------------------------------------REI 142 (343)
T ss_dssp CCCS----CEEEEEECSSTTEEEEEETT-------------------------------------------------SCE
T ss_pred CCCC----cEEEEEECCCCCEEEEEcCC-------------------------------------------------CEE
Confidence 2211 37789999999999877432 356
Q ss_pred EEEcCCCCc-eecC---CC-ceEEeeeeCCCC----------ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee
Q 004475 160 VLGSLDGTA-KDFG---TP-AVYTAVEPSPDQ----------KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (751)
Q Consensus 160 ~~~~~~G~~-~~lt---~~-~~~~~~~~SpDG----------~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (751)
.++|+.++. ..+. .+ ..+..++|+|++ .+|+..+. ...+.+||........+
T Consensus 143 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~~~~~ 209 (343)
T 2xzm_R 143 KLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW-------------DGRLKVWNTNFQIRYTF 209 (343)
T ss_dssp EEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET-------------TSEEEEEETTTEEEEEE
T ss_pred EEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC-------------CCEEEEEcCCCceeEEE
Confidence 666774422 2221 22 567889999998 44544332 34688999655433333
Q ss_pred ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-E
Q 004475 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-V 303 (751)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~ 303 (751)
..+ ...+..++|+|||++ |+..+ ..+.|.++++.. .............+. +
T Consensus 210 ~~h-------------~~~v~~~~~s~~g~~-l~sgs------------~dg~v~iwd~~~--~~~~~~~~~~~~~v~~v 261 (343)
T 2xzm_R 210 KAH-------------ESNVNHLSISPNGKY-IATGG------------KDKKLLIWDILN--LTYPQREFDAGSTINQI 261 (343)
T ss_dssp ECC-------------SSCEEEEEECTTSSE-EEEEE------------TTCEEEEEESSC--CSSCSEEEECSSCEEEE
T ss_pred cCc-------------cccceEEEECCCCCE-EEEEc------------CCCeEEEEECCC--CcccceeecCCCcEEEE
Confidence 222 233568999999998 55543 235788888731 222222223344566 9
Q ss_pred EEecCCceEEEeeeecccceeEEEecCCCCCCcce-eeeecccccc---cCC-CCCCCeeeCCCCCEEEEee
Q 004475 304 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRVFENV---YSD-PGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 304 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~l~~~~~~~~---~~~-~~~~~~~~spDG~~l~~~~ 370 (751)
+|+|+++.|+.+. .. .+.+.++.++..... .+........ ... .....++|+|||+.|+..+
T Consensus 262 ~~sp~~~~la~~~---d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 262 AFNPKLQWVAVGT---DQ--GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EECSSSCEEEEEE---SS--CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred EECCCCCEEEEEC---CC--CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 9999999876543 22 344455544311111 1110000000 000 0011278999999998877
No 269
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.55 E-value=2.7e-12 Score=135.02 Aligned_cols=296 Identities=10% Similarity=0.019 Sum_probs=171.0
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++||..+ ....|.++++.+++.......... .+..++|+|||+.|+..+.+
T Consensus 68 ~V~~~~~sp~~~~l~s~s----------~D~~v~iWd~~~~~~~~~~~~h~~----~v~~~~~s~~g~~las~~~d---- 129 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSAS----------QDGRLIVWNALTSQKTHAIKLHCP----WVMECAFAPNGQSVACGGLD---- 129 (380)
T ss_dssp CEEEEEECTTSSCEEEEE----------TTSEEEEEETTTTEEEEEEECCCT----TCCCCEECTTSSEEEECCSS----
T ss_pred EEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCccceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 688999999999998863 346788889888765443322221 36788999999999876432
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-C-----C--C-ceecCCC-ceEEeee
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D-----G--T-AKDFGTP-AVYTAVE 181 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~-----G--~-~~~lt~~-~~~~~~~ 181 (751)
..+.++++ + + . .+.+..+ ..+..+.
T Consensus 130 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 130 ---------------------------------------------SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ---------------------------------------------SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred ---------------------------------------------CcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 22333343 1 1 1 1223334 5677889
Q ss_pred eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec-CCCceEEEE
Q 004475 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWV 260 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~~i~~~ 260 (751)
|+|++...+++... ...+.+||+.+++.......... ......+..+.|+| +++. ++..
T Consensus 165 ~~~~~~~~l~s~s~------------D~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~-l~sg 224 (380)
T 3iz6_a 165 YVPDQETRLITGSG------------DQTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINSLNANM-FISG 224 (380)
T ss_dssp CCSSSSSCEEEECT------------TSCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECSSSCCE-EEEE
T ss_pred EecCCCCEEEEECC------------CCcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeecCCCCE-EEEE
Confidence 99987554444322 34688999987754433221111 11123355788877 6664 4443
Q ss_pred EeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee
Q 004475 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 339 (751)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (751)
+ ..+.|.++|+. .++.....+......+. +.|+|||+.|+.++. ...|.+.|+.++ ....
T Consensus 225 s------------~D~~v~~wd~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~~~~--~~~~ 285 (380)
T 3iz6_a 225 S------------CDTTVRLWDLR-ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDMRTG--HQLQ 285 (380)
T ss_dssp E------------TTSCEEEEETT-TTCCCCEEECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEETTTT--EEEE
T ss_pred E------------CCCeEEEEECC-CCCcceEEECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEECCCC--cEEE
Confidence 3 23578888874 12234445555566677 999999998887652 235666677664 2222
Q ss_pred eeeccccccc-CCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhh
Q 004475 340 LFDRVFENVY-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 418 (751)
Q Consensus 340 l~~~~~~~~~-~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 418 (751)
.......... ..+....++|+|||+.|+.... ...|++||+.+++.......-..
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~---------------------dg~i~vwd~~~~~~~~~~~~~~~--- 341 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFAGYS---------------------NGDCYVWDTLLAEMVLNLGTLQN--- 341 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEEECT---------------------TSCEEEEETTTCCEEEEECCSCS---
T ss_pred EecccccccccccCceEEEEECCCCCEEEEEEC---------------------CCCEEEEECCCCceEEEEecccC---
Confidence 2221111000 0001122789999998887762 23788999987765433211000
Q ss_pred hceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 419 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 419 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
........++|||||+.|+-. .. -..+.++++.++
T Consensus 342 ----~h~~~v~~l~~s~dg~~l~sg-s~---D~~i~iW~~~~~ 376 (380)
T 3iz6_a 342 ----SHEGRISCLGLSSDGSALCTG-SW---DKNLKIWAFSGH 376 (380)
T ss_dssp ----SCCCCCCEEEECSSSSEEEEE-CT---TSCEEEEECCSS
T ss_pred ----CCCCceEEEEECCCCCEEEEe-eC---CCCEEEEecCCC
Confidence 001112336899999976643 22 234777777654
No 270
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.3e-14 Score=149.41 Aligned_cols=243 Identities=10% Similarity=-0.007 Sum_probs=150.6
Q ss_pred cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCC
Q 004475 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 30 ~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
...+...+|||||++||..+ ..+.+.+++.++ ....+. .....-...+..++|||||++|+..+.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s----------~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS----------NNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE----------TTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT--
T ss_pred CCcEEEEEECCCCCEEEEEe----------CCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC--
Confidence 44689999999999999874 335566677543 223332 1110001137799999999999988543
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc--------eec----CCC-c
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--------KDF----GTP-A 175 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~--------~~l----t~~-~ 175 (751)
+.|.++++ +|.. ..+ ..+ .
T Consensus 151 -----------------------------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~ 183 (588)
T 2j04_A 151 -----------------------------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKD 183 (588)
T ss_dssp -----------------------------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC
T ss_pred -----------------------------------------------CEEEEEECCCCccccccceeeeeeecccccccc
Confidence 46777777 4432 333 222 5
Q ss_pred eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee----eeccCCCCCCCCCccCCccCCCceeeeec
Q 004475 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR----ELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (751)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~sp 251 (751)
.+..++||||| |+..+.+ ..+++|+++++... .+... ....+..++|+
T Consensus 184 ~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs- 235 (588)
T 2j04_A 184 WVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV- 235 (588)
T ss_dssp CEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE-
T ss_pred cEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE-
Confidence 78899999999 5544333 35889999876532 12111 11235688999
Q ss_pred CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-eeceeEE-EEE--ecCCceEEEeeeecccceeEEE
Q 004475 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS-VSW--CDDSLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 252 dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~-~~~--spdg~~l~~~~~~~~~~~~l~~ 327 (751)
|+. |+.+. .+.|.+++++ ++....+. .....+. ++| |||++.|+.+.+ ++. +||.
T Consensus 236 -g~~-LASa~-------------~~tIkLWd~~---~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~e--dG~-klw~ 294 (588)
T 2j04_A 236 -DYK-VVLTC-------------PGYVHKIDLK---NYSISSLKTGSLENFHIIPLNHEKESTILLMSNK--TSY-KVLL 294 (588)
T ss_dssp -TTE-EEEEC-------------SSEEEEEETT---TTEEEEEECSCCSCCCEEEETTCSSCEEEEECSS--CEE-EEEE
T ss_pred -CCE-EEEEe-------------CCeEEEEECC---CCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcC--CCC-EEEe
Confidence 555 44432 1578999885 44442333 3444455 899 999988776552 233 6887
Q ss_pred ecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCcee
Q 004475 328 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 407 (751)
Q Consensus 328 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 407 (751)
.+ . ++++|||..+++.. ..+++|+..+++..
T Consensus 295 ~d-----------------~---------~~~spd~~l~a~~d-----------------------~~v~lW~~~g~~l~ 325 (588)
T 2j04_A 295 ED-----------------E---------LHVTADNIIAPYLE-----------------------KKFKKWSTIWNEFN 325 (588)
T ss_dssp SS-----------------S---------EEEECCCSSHHHHH-----------------------HHHHHTTTTTTSSS
T ss_pred ec-----------------c---------EEECCCceEEEEcC-----------------------CEEEEEECCCCcee
Confidence 65 1 55899998877752 15667777655432
Q ss_pred EEeeccchhhhhceeeeecCCcceeeccCCCEEEEEE
Q 004475 408 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 444 (751)
Q Consensus 408 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 444 (751)
.+ ... .. .+.+++||||+.++..+
T Consensus 326 ~~-~~~---------~~---I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 326 NY-ETT---------LV---IHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SS-CCE---------EE---EEEEEECTTSSEEEEEE
T ss_pred ee-ccc---------eE---EEEEEECCCCCEEEEEE
Confidence 11 111 11 12368999999888664
No 271
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.54 E-value=6.7e-13 Score=135.99 Aligned_cols=252 Identities=11% Similarity=0.085 Sum_probs=148.9
Q ss_pred cceeEEeecCCCCCCCCcc---cccCCC-CcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 4 FTGIGIHRLLPDDSLGPEK---EVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~---~l~~~~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
...|.+|++.+ ...+ .+..+. ....+...+|||||++|+..+ ....|.++++.+++..+...
T Consensus 39 D~~v~~W~~~~----~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s----------~D~~v~~wd~~~~~~~~~~~ 104 (319)
T 3frx_A 39 DKTLISWKLTG----DDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS----------WDKTLRLWDVATGETYQRFV 104 (319)
T ss_dssp TSEEEEEEEEE----ETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEE
T ss_pred CccEEEecCCC----CCccccccceEEeCCcccEEEEEECCCCCEEEEEe----------CCCEEEEEECCCCCeeEEEc
Confidence 34688898865 3221 111111 223578889999999998863 34678888998887544332
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
+... .+..++|+|+++.|+..+.+ ..|
T Consensus 105 ~h~~----~v~~~~~~~~~~~l~s~s~D-------------------------------------------------~~i 131 (319)
T 3frx_A 105 GHKS----DVMSVDIDKKASMIISGSRD-------------------------------------------------KTI 131 (319)
T ss_dssp CCSS----CEEEEEECTTSCEEEEEETT-------------------------------------------------SCE
T ss_pred cCCC----cEEEEEEcCCCCEEEEEeCC-------------------------------------------------CeE
Confidence 2221 37789999999998877543 356
Q ss_pred EEEcCCC-CceecCCC-ceEEeeeeCCCCc------eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC
Q 004475 160 VLGSLDG-TAKDFGTP-AVYTAVEPSPDQK------YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (751)
Q Consensus 160 ~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~------~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 231 (751)
.++++.+ ....+..+ ..+..+.|+|+++ .|+.... ...+.+||+.+.+.....
T Consensus 132 ~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-------------d~~i~~wd~~~~~~~~~~------ 192 (319)
T 3frx_A 132 KVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN-------------DKMVKAWNLNQFQIEADF------ 192 (319)
T ss_dssp EEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEET-------------TSCEEEEETTTTEEEEEE------
T ss_pred EEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC-------------CCEEEEEECCcchhheee------
Confidence 6677755 34444444 6778889998543 5554433 346889999876543211
Q ss_pred CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCc
Q 004475 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSL 310 (751)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~ 310 (751)
......+..++|+|||+. |+..+ ..+.|.++++. .............+. ++|+|||.
T Consensus 193 ------~~h~~~v~~~~~sp~g~~-l~s~~------------~dg~i~iwd~~---~~~~~~~~~~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 193 ------IGHNSNINTLTASPDGTL-IASAG------------KDGEIMLWNLA---AKKAMYTLSAQDEVFSLAFSPNRY 250 (319)
T ss_dssp ------CCCCSCEEEEEECTTSSE-EEEEE------------TTCEEEEEETT---TTEEEEEEECCSCEEEEEECSSSS
T ss_pred ------cCCCCcEEEEEEcCCCCE-EEEEe------------CCCeEEEEECC---CCcEEEEecCCCcEEEEEEcCCCC
Confidence 112234568999999997 55543 33578899885 222222223344566 99999999
Q ss_pred eEEEeeeecccceeEEEecCCCCCCcceeeeeccccccc--CCCCCCCeeeCCCCCEEEEee
Q 004475 311 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY--SDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 311 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~spDG~~l~~~~ 370 (751)
.|+.... ....+|.++ .. .............. .......++|||||++|+..+
T Consensus 251 ~la~~~~---~~i~v~~~~--~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 251 WLAAATA---TGIKVFSLD--PQ--YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EEEEEET---TEEEEEEET--TE--EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcC---CCcEEEEeC--cC--eeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 9887652 223455443 32 11111111100000 000011278999999998877
No 272
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.54 E-value=2.7e-12 Score=131.49 Aligned_cols=282 Identities=7% Similarity=0.033 Sum_probs=163.4
Q ss_pred cccceeecCCC-CeEEEEEeecccccccCCceeEEEEEcCCCCe------eeccCCCCccccceeeeeEEecCCcEEEEe
Q 004475 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (751)
Q Consensus 32 ~~~~p~~SPDG-~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~------~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 104 (751)
.+...+|||++ +.|+..+ ....|.++++.+.+. +.+..... .+..++|+|||++|+..
T Consensus 19 ~V~~l~~~~~~~~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSAS----------RDKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSA 83 (319)
T ss_dssp CEEEEEECSSCTTEEEEEE----------TTSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEE
T ss_pred eEEEEEccCCCccEEEEec----------CCccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEE
Confidence 57889999987 4555532 224555555543221 12221111 36788999999999877
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeee
Q 004475 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVE 181 (751)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~ 181 (751)
+.+ ..|.++|+ +|+ .+.+..+ ..+..++
T Consensus 84 s~D-------------------------------------------------~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 84 SWD-------------------------------------------------KTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp ETT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred eCC-------------------------------------------------CEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 543 47888888 673 4455555 7788999
Q ss_pred eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC------c
Q 004475 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP------S 255 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~------~ 255 (751)
|+|+|+.|+..+.+ ..+.+||+.+.....+..+. ..+..+.|+|+++ .
T Consensus 115 ~~~~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 115 IDKKASMIISGSRD-------------KTIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ECTTSCEEEEEETT-------------SCEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCE
T ss_pred EcCCCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccE
Confidence 99999998876544 35889999876555443222 2245678888543 3
Q ss_pred eEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCC
Q 004475 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 334 (751)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 334 (751)
++..+ ..+.|.++++.. ......+......+. +.|+|||+.|+.... ...|.+.++.++
T Consensus 169 -l~s~~------------~d~~i~~wd~~~--~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~- 228 (319)
T 3frx_A 169 -IISAG------------NDKMVKAWNLNQ--FQIEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAK- 228 (319)
T ss_dssp -EEEEE------------TTSCEEEEETTT--TEEEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTT-
T ss_pred -EEEEe------------CCCEEEEEECCc--chhheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC-
Confidence 33332 235788888751 112223334455677 999999998887652 245666777664
Q ss_pred CcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccc
Q 004475 335 VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 414 (751)
Q Consensus 335 ~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 414 (751)
........ ...+.. ++|+|||..|+..... .+.+|+++++..........
T Consensus 229 -~~~~~~~~-~~~v~~------~~~sp~~~~la~~~~~----------------------~i~v~~~~~~~~~~~~~~~~ 278 (319)
T 3frx_A 229 -KAMYTLSA-QDEVFS------LAFSPNRYWLAAATAT----------------------GIKVFSLDPQYLVDDLRPEF 278 (319)
T ss_dssp -EEEEEEEC-CSCEEE------EEECSSSSEEEEEETT----------------------EEEEEEETTEEEEEEECCCC
T ss_pred -cEEEEecC-CCcEEE------EEEcCCCCEEEEEcCC----------------------CcEEEEeCcCeeeeccCccc
Confidence 22222211 122222 8899999988876621 46667776544322221110
Q ss_pred hhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 415 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
... ..........++|||||+.|+... .. +.|.++++.+
T Consensus 279 ~~~---~~~~~~~v~~~~~spdg~~l~sg~-~D---g~i~vWd~~t 317 (319)
T 3frx_A 279 AGY---SKAAEPHAVSLAWSADGQTLFAGY-TD---NVIRVWQVMT 317 (319)
T ss_dssp TTC---CGGGCCCEEEEEECTTSSEEEEEE-TT---SCEEEEEEEE
T ss_pred ccc---ccCcCcceeEEEECCCCCEEEEee-cC---ceEEEEEEee
Confidence 000 000000111368999999887543 22 3466666543
No 273
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.54 E-value=2.8e-12 Score=133.46 Aligned_cols=266 Identities=11% Similarity=0.090 Sum_probs=160.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++||..+ ....|.+++..+++.......... .+..++|+|||+.|+....+
T Consensus 66 ~V~~~~~s~d~~~l~s~s----------~Dg~v~vWd~~~~~~~~~~~~~~~----~v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSS----------QDGKVIVWDSFTTNKEHAVTMPCT----WVMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSEEEEEETTTCCEEEEEECSSS----CCCEEEECTTSSEEEEESTT----
T ss_pred eEEEEEECCCCCEEEEEe----------CCCeEEEEECCCCCcceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 588999999999998863 346788888877764433222221 36788999999999877432
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC--CC------CceecCCC-ceEEeeee
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DG------TAKDFGTP-AVYTAVEP 182 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~G------~~~~lt~~-~~~~~~~~ 182 (751)
..+.++++ .. ....+..+ ..+..+.|
T Consensus 128 ---------------------------------------------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 128 ---------------------------------------------NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ---------------------------------------------SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred ---------------------------------------------CCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 23333333 11 11222223 56788999
Q ss_pred CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeec--CCCceEEE
Q 004475 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYW 259 (751)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~sp--dG~~~i~~ 259 (751)
+||++.|+..+.+ ..+.+||+++++.. .+..+ ...+..+.|+| +|+. ++.
T Consensus 163 ~~~~~~l~t~s~D-------------~~v~lwd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~g~~-l~s 215 (354)
T 2pbi_B 163 TNSDMQILTASGD-------------GTCALWDVESGQLLQSFHGH-------------GADVLCLDLAPSETGNT-FVS 215 (354)
T ss_dssp CSSSSEEEEEETT-------------SEEEEEETTTCCEEEEEECC-------------SSCEEEEEECCCSSCCE-EEE
T ss_pred eCCCCEEEEEeCC-------------CcEEEEeCCCCeEEEEEcCC-------------CCCeEEEEEEeCCCCCE-EEE
Confidence 9999998876543 36889999876543 22221 12244667766 5665 444
Q ss_pred EEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcce
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 338 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 338 (751)
.+ ..+.+.++++.. +.....+......+. ++|+|+|+.|+..+. . ..|.+.++... ...
T Consensus 216 gs------------~Dg~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--D--~~v~lwd~~~~--~~~ 275 (354)
T 2pbi_B 216 GG------------CDKKAMVWDMRS--GQCVQAFETHESDVNSVRYYPSGDAFASGSD--D--ATCRLYDLRAD--REV 275 (354)
T ss_dssp EE------------TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEET--T--SCEEEEETTTT--EEE
T ss_pred Ee------------CCCeEEEEECCC--CcEEEEecCCCCCeEEEEEeCCCCEEEEEeC--C--CeEEEEECCCC--cEE
Confidence 33 235788888751 222333444556677 999999998877652 2 34555566553 112
Q ss_pred eeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhh
Q 004475 339 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 418 (751)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 418 (751)
.+....... .....++|+|||+.|+....+ ..|.+||+.+++..........
T Consensus 276 ~~~~~~~~~----~~~~~~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~l~~h~~--- 327 (354)
T 2pbi_B 276 AIYSKESII----FGASSVDFSLSGRLLFAGYND---------------------YTINVWDVLKGSRVSILFGHEN--- 327 (354)
T ss_dssp EEECCTTCC----SCEEEEEECTTSSEEEEEETT---------------------SCEEEEETTTCSEEEEECCCSS---
T ss_pred EEEcCCCcc----cceeEEEEeCCCCEEEEEECC---------------------CcEEEEECCCCceEEEEECCCC---
Confidence 222111100 001117799999988887732 2788999987765433322111
Q ss_pred hceeeeecCCcceeeccCCCEEEEE
Q 004475 419 ETAVALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 419 ~~~~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
.+. .++|||||+.|+..
T Consensus 328 -~v~-------~l~~spdg~~l~sg 344 (354)
T 2pbi_B 328 -RVS-------TLRVSPDGTAFCSG 344 (354)
T ss_dssp -CEE-------EEEECTTSSCEEEE
T ss_pred -cEE-------EEEECCCCCEEEEE
Confidence 122 25899999977754
No 274
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.54 E-value=2.5e-12 Score=133.06 Aligned_cols=248 Identities=10% Similarity=0.066 Sum_probs=151.6
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--eeccCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--~~lt~~~ 81 (751)
...|.+||+.+ ++....... ....+...+|||||++||... ....+.++++.+++. +......
T Consensus 76 Dg~v~iWd~~~----~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~----------~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 76 DGKLIIWDSYT----TNKVHAIPL-RSSWVMTCAYAPSGNYVACGG----------LDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp TTEEEEEETTT----CCEEEEEEC-SSSCEEEEEECTTSSEEEEEE----------TTCEEEEEETTTCSBSCEEEEEEE
T ss_pred CCcEEEEECCC----CCcceEeec-CCccEEEEEECCCCCEEEEEe----------CCCeEEEEECccCCCcceeEEEec
Confidence 34689999877 665443211 222577889999999998853 335677777766531 1111101
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.+ ...+..+.|+|+++ |+..+.+ ..|.+
T Consensus 141 ~h--~~~v~~~~~~~~~~-l~s~s~d-------------------------------------------------~~i~~ 168 (340)
T 1got_B 141 GH--TGYLSCCRFLDDNQ-IVTSSGD-------------------------------------------------TTCAL 168 (340)
T ss_dssp CC--SSCEEEEEEEETTE-EEEEETT-------------------------------------------------SCEEE
T ss_pred CC--CccEEEEEECCCCc-EEEEECC-------------------------------------------------CcEEE
Confidence 11 11366789999997 5444321 46777
Q ss_pred EcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475 162 GSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (751)
Q Consensus 162 ~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (751)
+|+ +|+ ...+..+ ..+..++|+|||+.|+..+.+ ..+.+||+.++...... .
T Consensus 169 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~------------~ 223 (340)
T 1got_B 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD-------------ASAKLWDVREGMCRQTF------------T 223 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCSEEEEE------------C
T ss_pred EECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC-------------CcEEEEECCCCeeEEEE------------c
Confidence 888 663 3445545 778899999999988765443 35889999766433211 1
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec---eeEE-EEEecCCceEEE
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---LRFS-VSWCDDSLALVN 314 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~---~~~~-~~~spdg~~l~~ 314 (751)
.....+..++|+|||+. ++..+ ..+.|.++++. ........... ..+. ++|+|||+.|+.
T Consensus 224 ~h~~~v~~v~~~p~~~~-l~s~s------------~d~~v~iwd~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 224 GHESDINAICFFPNGNA-FATGS------------DDATCRLFDLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLA 287 (340)
T ss_dssp CCSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEETT---TTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred CCcCCEEEEEEcCCCCE-EEEEc------------CCCcEEEEECC---CCcEEEEEccCCcccceEEEEECCCCCEEEE
Confidence 12233668999999997 55543 23578888874 22211111111 2456 899999998887
Q ss_pred eeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 315 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
+.. ...|.+.+..++ ............+.. ++|+|||+.|+..+.
T Consensus 288 g~~----d~~i~vwd~~~~--~~~~~~~~h~~~v~~------~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 288 GYD----DFNCNVWDALKA--DRAGVLAGHDNRVSC------LGVTDDGMAVATGSW 332 (340)
T ss_dssp EET----TSEEEEEETTTC--CEEEEEECCSSCEEE------EEECTTSSCEEEEET
T ss_pred ECC----CCeEEEEEcccC--cEeeEeecCCCcEEE------EEEcCCCCEEEEEcC
Confidence 652 245666776663 222222222222322 789999999988873
No 275
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.53 E-value=9.4e-12 Score=134.23 Aligned_cols=216 Identities=6% Similarity=-0.053 Sum_probs=122.3
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCCCCccCCccCCCceeeeecC-
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRAD- 252 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~spd- 252 (751)
..+..++|+|||++|++... ...+++|++.++.... .. ..+......+..++|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~-------------~g~v~~~~~~~~~~~~~~~---------~~~~~h~~~v~~~~~sp~~ 207 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADK-------------FGDVYSIDINSIPEEKFTQ---------EPILGHVSMLTDVHLIKDS 207 (450)
T ss_dssp SCEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCCCSSCCC---------CCSEECSSCEEEEEEEECT
T ss_pred CCceEEEEcCCCCEEEEEeC-------------CCcEEEEecCCcccccccc---------eeeecccCceEEEEEcCCC
Confidence 66789999999999988643 2368899987654331 00 011112234678999999
Q ss_pred --CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE-eEeeceeEE-EEEecCCceEEEeeeecccceeEEEe
Q 004475 253 --KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLV 328 (751)
Q Consensus 253 --G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~ 328 (751)
|+. |+..+ ..+.|+++++.. +..... +......+. +.|+ ||+.|+... ....|.+.
T Consensus 208 ~~~~~-l~s~~------------~d~~i~vwd~~~--~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~----~d~~v~vw 267 (450)
T 2vdu_B 208 DGHQF-IITSD------------RDEHIKISHYPQ--CFIVDKWLFGHKHFVSSICCG-KDYLLLSAG----GDDKIFAW 267 (450)
T ss_dssp TSCEE-EEEEE------------TTSCEEEEEESC--TTCEEEECCCCSSCEEEEEEC-STTEEEEEE----SSSEEEEE
T ss_pred CCCcE-EEEEc------------CCCcEEEEECCC--CceeeeeecCCCCceEEEEEC-CCCEEEEEe----CCCeEEEE
Confidence 776 55543 235788888751 222333 334455667 9999 999988765 23467777
Q ss_pred cCCCCCCcceeeeecc--cccc-c---------------C-CCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCC
Q 004475 329 CPGSKDVAPRVLFDRV--FENV-Y---------------S-DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 389 (751)
Q Consensus 329 ~~~~~~~~~~~l~~~~--~~~~-~---------------~-~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~ 389 (751)
++.++ ......... .... . . ......++|+|||+.|++...
T Consensus 268 d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~------------------ 327 (450)
T 2vdu_B 268 DWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE------------------ 327 (450)
T ss_dssp ETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET------------------
T ss_pred ECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC------------------
Confidence 87774 222222110 0000 0 0 000012679999999888771
Q ss_pred CCCCceeEEEec--CCC-ceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCC------eEEEEEcCC
Q 004475 390 EGNIPFLDLFDI--NTG-SKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEIT------QYHILSWPL 460 (751)
Q Consensus 390 ~~~~~~l~~~d~--~~g-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~------~l~~~~~~~ 460 (751)
....|.+|++ .++ ....+-..... .....++|+|+ .++++..+...+. .+|.++..+
T Consensus 328 --~d~~i~iw~~~~~~~~~l~~~~~~~~~----------~~v~~~~~~~~--~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 328 --ATKCIIILEMSEKQKGDLALKQIITFP----------YNVISLSAHND--EFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp --TCSEEEEEEECSSSTTCEEEEEEEECS----------SCEEEEEEETT--EEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred --CCCeEEEEEeccCCCCceeeccEeccC----------CceEEEEecCC--cEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 1236788888 443 22222111100 11122578884 4555655555454 788888877
Q ss_pred CceeEee
Q 004475 461 KKSSQIT 467 (751)
Q Consensus 461 g~~~~lt 467 (751)
++.+ ++
T Consensus 394 ~~~~-~~ 399 (450)
T 2vdu_B 394 NSFV-VN 399 (450)
T ss_dssp TEEE-EC
T ss_pred CeEE-Ec
Confidence 7653 55
No 276
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.53 E-value=2.4e-12 Score=136.89 Aligned_cols=246 Identities=17% Similarity=0.130 Sum_probs=159.3
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|.+||+.+ |+...... .....+...+|+|||+.|+..+ ....|.++++.+++..+...+...
T Consensus 130 g~i~vwd~~~----~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs----------~D~~i~iwd~~~~~~~~~~~~h~~- 193 (410)
T 1vyh_C 130 ATIKVWDYET----GDFERTLK-GHTDSVQDISFDHSGKLLASCS----------ADMTIKLWDFQGFECIRTMHGHDH- 193 (410)
T ss_dssp SCEEEEETTT----CCCCEEEC-CCSSCEEEEEECTTSSEEEEEE----------TTSCCCEEETTSSCEEECCCCCSS-
T ss_pred CeEEEEECCC----CcEEEEEe-ccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCceeEEEcCCCC-
Confidence 4789999988 76654321 1223588899999999888753 335677778888775443332221
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
.+..++|+|||+.|+..+.+ ..|.++|+
T Consensus 194 ---~V~~v~~~p~~~~l~s~s~D-------------------------------------------------~~i~~wd~ 221 (410)
T 1vyh_C 194 ---NVSSVSIMPNGDHIVSASRD-------------------------------------------------KTIKMWEV 221 (410)
T ss_dssp ---CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred ---CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CeEEEEEC
Confidence 47889999999998877542 46788888
Q ss_pred -CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCCCCccCCc
Q 004475 165 -DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 165 -~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~ 240 (751)
+|. ...+..+ ..+..+.|+|||+.|+..+.+ ..+.+||+.+++... +..+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D-------------~~v~vwd~~~~~~~~~~~~h------------- 275 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND-------------QTVRVWVVATKECKAELREH------------- 275 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCC-------------
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCceeeEecCC-------------
Confidence 663 4455555 678889999999988876543 358899998765432 2111
Q ss_pred cCCCceeeeecCC--------------------CceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeecee
Q 004475 241 REGMRSISWRADK--------------------PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLR 300 (751)
Q Consensus 241 ~~~~~~~~~spdG--------------------~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~ 300 (751)
...+..+.|+|++ +. ++..+ ..+.|.++++.. +.....+......
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~sgs------------~D~~i~iwd~~~--~~~~~~~~~h~~~ 340 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPF-LLSGS------------RDKTIKMWDVST--GMCLMTLVGHDNW 340 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCE-EEEEE------------TTSEEEEEETTT--TEEEEEEECCSSC
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCE-EEEEe------------CCCeEEEEECCC--CceEEEEECCCCc
Confidence 1234578888874 33 33322 235788888751 2233444445556
Q ss_pred EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 301 FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 301 ~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
+. +.|+|+|++|+.++. ...|.+.+..++ .....+ ......+.. ++|+|+|..|+..+.
T Consensus 341 v~~v~~~~~g~~l~s~s~----D~~i~vwd~~~~-~~~~~~-~~h~~~v~~------l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCAD----DKTLRVWDYKNK-RCMKTL-NAHEHFVTS------LDFHKTAPYVVTGSV 400 (410)
T ss_dssp EEEEEECSSSSCEEEEET----TTEEEEECCTTS-CCCEEE-ECCSSCEEE------EEECSSSSCEEEEET
T ss_pred EEEEEEcCCCCEEEEEeC----CCeEEEEECCCC-ceEEEE-cCCCCcEEE------EEEcCCCCEEEEEeC
Confidence 77 999999999886552 245666677664 222223 222222333 889999999988773
No 277
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.52 E-value=2.3e-12 Score=133.64 Aligned_cols=290 Identities=10% Similarity=-0.020 Sum_probs=158.4
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 113 (751)
..++++++++.++.. .....|+++|+++++..+....+.. .....++|+|||+.+++....
T Consensus 3 ~g~~~~~~~~~~v~~----------~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~~------ 63 (349)
T 1jmx_B 3 TGPALKAGHEYMIVT----------NYPNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNNH------ 63 (349)
T ss_dssp -CCCCCTTCEEEEEE----------ETTTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEETT------
T ss_pred ccccccCCCEEEEEe----------CCCCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeCC------
Confidence 457788888665543 3457999999998876544332220 014678999999988776321
Q ss_pred CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce-ecCCCc-------eEEeeeeCC
Q 004475 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA-------VYTAVEPSP 184 (751)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt~~~-------~~~~~~~Sp 184 (751)
...|+++++ +|+.. .+.... ....++|||
T Consensus 64 ------------------------------------------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 64 ------------------------------------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 101 (349)
T ss_dssp ------------------------------------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT
T ss_pred ------------------------------------------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECC
Confidence 147888898 56433 332111 145789999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee-ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEec
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~ 263 (751)
||++|++........ ..........|++||+++++.... .... ....+..++|+|||+ +++..
T Consensus 102 dg~~l~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~s~dg~--l~~~~-- 165 (349)
T 1jmx_B 102 DGKEVYATVNPTQRL-NDHYVVKPPRLEVFSTADGLEAKPVRTFP-----------MPRQVYLMRAADDGS--LYVAG-- 165 (349)
T ss_dssp TSSEEEEEEEEEEEC-SSCEEECCCEEEEEEGGGGGGBCCSEEEE-----------CCSSCCCEEECTTSC--EEEES--
T ss_pred CCCEEEEEccccccc-ccccccCCCeEEEEECCCccccceeeecc-----------CCCcccceeECCCCc--EEEcc--
Confidence 999999876431000 000000135799999987543211 1000 012345778999998 33321
Q ss_pred cCCCCccccCcccceeeccCCCCCCCCceEeEeece-------------------------eEE-EEEecCCceEEEeee
Q 004475 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-------------------------RFS-VSWCDDSLALVNETW 317 (751)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~-------------------------~~~-~~~spdg~~l~~~~~ 317 (751)
..|++++++ ++.......... ... ..+++|+.......
T Consensus 166 ------------~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~- 229 (349)
T 1jmx_B 166 ------------PDIYKMDVK---TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA- 229 (349)
T ss_dssp ------------SSEEEECTT---TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC-
T ss_pred ------------CcEEEEeCC---CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc-
Confidence 237777774 222222111110 111 44555543322111
Q ss_pred ecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCC-CCCEEEEeeeecCCcceEEEEccCCCCCCCCCcee
Q 004475 318 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 396 (751)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 396 (751)
.....++.++..++ ..+.+....... ....++||| ||+.|++. . ..|
T Consensus 230 --~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~sp~dg~~l~~~--~---------------------~~v 277 (349)
T 1jmx_B 230 --DLLYGYLSVDLKTG--KTHTQEFADLTE-----LYFTGLRSPKDPNQIYGV--L---------------------NRL 277 (349)
T ss_dssp --EEEEEEEEEETTTC--CEEEEEEEECSS-----CEEEEEECSSCTTEEEEE--E---------------------SEE
T ss_pred --ccceeEEEEeccCC--cEEecccccCCC-----cceeeEecCCCCCEEEEE--c---------------------CeE
Confidence 11223444666664 222222111100 011177999 99988776 2 178
Q ss_pred EEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 397 DLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 397 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
++||+++++......... ....++|||||+.|+.. . ....|+++|+.+++..
T Consensus 278 ~~~d~~~~~~~~~~~~~~------------~~~~~~~s~dg~~l~~~--~--~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDH------------TYYCVAFDKKGDKLYLG--G--TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEEETTTTEEEEEEECSS------------CCCEEEECSSSSCEEEE--S--BSSEEEEEETTTTEEE
T ss_pred EEEECccCeEEEEEcCCC------------CccceEECCCCCEEEEe--c--CCCeEEEEecccccee
Confidence 999999887655543321 12346899999988873 2 2367999999887644
No 278
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.52 E-value=1.5e-12 Score=139.73 Aligned_cols=274 Identities=14% Similarity=0.096 Sum_probs=160.4
Q ss_pred cceeEEeecCCCCCCCCcccccCC-CCcccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
...|++||+.+ ++...+..+ .....+...+||| ||++|+.. .....|.++|++++..+.+....
T Consensus 141 dg~i~lWd~~~----~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~----------s~D~~v~iwd~~~~~~~~~~~~~ 206 (435)
T 4e54_B 141 GGDIMLWNFGI----KDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS----------SMEGTTRLQDFKGNILRVFASSD 206 (435)
T ss_dssp TSCEEEECSSC----CSCCEEECCCSSSCCCCEEEECSSCTTEEEEE----------CSSSCEEEEETTSCEEEEEECCS
T ss_pred CCEEEEEECCC----CCceeEEEccCCCCCEEEEEEeCCCCCEEEEE----------eCCCEEEEeeccCCceeEEeccC
Confidence 34799999988 665443322 2334689999999 67777764 23356778888877665554333
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. ...+..++|+|||+.|+....+ ..|.+
T Consensus 207 ~~--~~~~~~~~~~~~~~~l~~g~~d-------------------------------------------------g~i~~ 235 (435)
T 4e54_B 207 TI--NIWFCSLDVSASSRMVVTGDNV-------------------------------------------------GNVIL 235 (435)
T ss_dssp SC--SCCCCCEEEETTTTEEEEECSS-------------------------------------------------SBEEE
T ss_pred CC--CccEEEEEECCCCCEEEEEeCC-------------------------------------------------CcEee
Confidence 21 1124578999999999877432 46788
Q ss_pred EcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccC
Q 004475 162 GSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYN 238 (751)
Q Consensus 162 ~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~ 238 (751)
+|++| ....+..+ ..+..++|+|+++.++++... ...+.+||+...+.. .+.. ..
T Consensus 236 wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~------------d~~v~iwd~~~~~~~~~~~~----------~~ 293 (435)
T 4e54_B 236 LNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV------------DQTVKIWDLRQVRGKASFLY----------SL 293 (435)
T ss_dssp EESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET------------TSBCCEEETTTCCSSSCCSB----------CC
T ss_pred eccCcceeEEEecccceEEeeeecCCCceEEEEecC------------cceeeEEecccccccceEEE----------ee
Confidence 88866 44555545 778899999999977766543 235778998754322 1110 01
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec------eeEE-EEEecCCce
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFS-VSWCDDSLA 311 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~------~~~~-~~~spdg~~ 311 (751)
.....+..++|+|||++ |+..+ ..+.|.++++.. +.....+.... .... ..|+|++..
T Consensus 294 ~h~~~v~~~~~spdg~~-l~s~~------------~D~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
T 4e54_B 294 PHRHPVNAACFSPDGAR-LLTTD------------QKSEIRVYSASQ--WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL 358 (435)
T ss_dssp BCSSCEEECCBCTTSSE-EEEEE------------SSSCEEEEESSS--SSSEEEECCCCCCCCSSSCCCBCEECSSSSC
T ss_pred eccccccceeECCCCCe-eEEEc------------CCCEEEEEECCC--CccceEEecccccccccceeEEEEEcCCCCE
Confidence 12234668999999998 55543 235677777741 22222222111 0111 567888877
Q ss_pred EEEeeeec--------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEc
Q 004475 312 LVNETWYK--------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLN 383 (751)
Q Consensus 312 l~~~~~~~--------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~ 383 (751)
++...... .....|.+.+..++ .....+.......+.. ..+|||||+.|+..+ +
T Consensus 359 ~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-~~~~~l~~~~~~~v~s-----~~~fspdg~~lasg~-d----------- 420 (435)
T 4e54_B 359 IVVGRYPDPNFKSCTPYELRTIDVFDGNSG-KMMCQLYDPESSGISS-----LNEFNPMGDTLASAM-G----------- 420 (435)
T ss_dssp EEEECCCCTTSCCSSTTCCCCEEEECSSSC-CEEEEECCSSCCCCCC-----EEEECTTSSCEEEEC-S-----------
T ss_pred EEEEEcCCCCeEEEEecCCCEEEEEECCCC-cEEEEEeCCCCCcEEE-----EEEECCCCCEEEEEc-C-----------
Confidence 76554211 12235777777764 2222232222222211 136999999887654 1
Q ss_pred cCCCCCCCCCceeEEEecCCCcee
Q 004475 384 GRGFTPEGNIPFLDLFDINTGSKE 407 (751)
Q Consensus 384 ~~~~~~~~~~~~l~~~d~~~g~~~ 407 (751)
..|++|++++|+.+
T Consensus 421 ----------~~i~iW~~~~gk~r 434 (435)
T 4e54_B 421 ----------YHILIWSQQEARTR 434 (435)
T ss_dssp ----------SEEEECCCC-----
T ss_pred ----------CcEEEEECCcCeee
Confidence 16888999887653
No 279
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.52 E-value=2.6e-12 Score=135.38 Aligned_cols=250 Identities=12% Similarity=0.051 Sum_probs=151.3
Q ss_pred cceeEEeecCCCCCCCCcccccCC-CCcccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
...|.+|++.+ ++....... .....+....||| |++.|+... ....|.++++.+...+.+....
T Consensus 95 dg~i~iwd~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 95 GGDIILWDYDV----QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS----------IRGATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp TSCEEEEETTS----TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE----------TTTEEEEEETTSCEEEEEECCC
T ss_pred CCeEEEEeCCC----cccceeeecCCcCCceeEEEeCCCCCCEEEEEe----------CCCEEEEEECCCCceEEEeccC
Confidence 34789999988 776655432 2334688999999 667776642 3467888898876665554333
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. ...+..++|+||++.|+....+ ..|.+
T Consensus 161 ~~--~~~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~i~i 189 (383)
T 3ei3_B 161 SW--DYWYCCVDVSVSRQMLATGDST-------------------------------------------------GRLLL 189 (383)
T ss_dssp CS--SCCEEEEEEETTTTEEEEEETT-------------------------------------------------SEEEE
T ss_pred CC--CCCeEEEEECCCCCEEEEECCC-------------------------------------------------CCEEE
Confidence 21 1236789999999998877432 47888
Q ss_pred EcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc----eeeeeccCCCCCCCCC
Q 004475 162 GSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPAEDIPV 235 (751)
Q Consensus 162 ~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~~~~~~ 235 (751)
+|+++ ....+..+ ..+..++|+|||++++++... ...+.+||+.+. .......
T Consensus 190 ~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~~~--------- 248 (383)
T 3ei3_B 190 LGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV------------DATVKLWDLRNIKDKNSYIAEMP--------- 248 (383)
T ss_dssp EETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEET------------TSEEEEEEGGGCCSTTCEEEEEE---------
T ss_pred EECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC------------CCEEEEEeCCCCCcccceEEEec---------
Confidence 88866 44555555 778899999999954444332 346889998752 2221111
Q ss_pred ccCCccCCCceeeeec-CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec----------------
Q 004475 236 CYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------- 298 (751)
Q Consensus 236 ~~~~~~~~~~~~~~sp-dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~---------------- 298 (751)
....+..++|+| ||+. |+..+ ..+.|.++++.. +.....+....
T Consensus 249 ----~~~~v~~~~~s~~~~~~-l~~~~------------~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p 309 (383)
T 3ei3_B 249 ----HEKPVNAAYFNPTDSTK-LLTTD------------QRNEIRVYSSYD--WSKPDQIIIHPHRQFQHLTPIKATWHP 309 (383)
T ss_dssp ----CSSCEEEEEECTTTSCE-EEEEE------------SSSEEEEEETTB--TTSCSEEEECCBCCCTTSCCCCCEECS
T ss_pred ----CCCceEEEEEcCCCCCE-EEEEc------------CCCcEEEEECCC--CccccccccccccccccccceEEeccC
Confidence 123456899999 9997 55543 235788888742 22223333211
Q ss_pred -eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 299 -LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 299 -~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
+... +.|+|||+. + .+....|.+.++.++ .....+......... ..++|+|||+.|+..+
T Consensus 310 ~~~~~~~~~s~dg~~----s--~s~d~~i~iwd~~~~-~~~~~l~~~~~~~~~-----~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 310 MYDLIVAGRYPDDQL----L--LNDKRTIDIYDANSG-GLVHQLRDPNAAGII-----SLNKFSPTGDVLASGM 371 (383)
T ss_dssp SSSEEEEECBCCTTT----C--TTCCCCEEEEETTTC-CEEEEECBTTBCSCC-----CEEEECTTSSEEEEEE
T ss_pred CCCceEEEecCCccc----c--cCCCCeEEEEecCCC-ceeeeecCCCCCceE-----EEEEEecCccEEEEec
Confidence 1222 445555554 1 123456777888774 222223211111111 1158999999887775
No 280
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.52 E-value=6.5e-12 Score=129.86 Aligned_cols=244 Identities=8% Similarity=0.027 Sum_probs=152.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC----eeeccCCCCccccceeeeeEEecCCc-EEEEeec
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIP 106 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspDg~-~l~~~~~ 106 (751)
.+...+|||||++|+... ....|+++++.+++ .+.+..... .+..++|+|||+ .|+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~----------~d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITS----------WDGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEE----------TTSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEc----------CCCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcC
Confidence 588999999999998863 33677777777776 444432222 477899999999 8887743
Q ss_pred CCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-CceecCC--C-ceEEeee
Q 004475 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGT--P-AVYTAVE 181 (751)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~--~-~~~~~~~ 181 (751)
+ ..|.++++ .+ +...+.. + ..+..++
T Consensus 78 d-------------------------------------------------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 78 Q-------------------------------------------------GEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp T-------------------------------------------------SCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred C-------------------------------------------------CeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 2 46778887 55 6666665 5 7788999
Q ss_pred eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC---------ceeeeeccCCCCCCCCCccCCccCCCceeeeecC
Q 004475 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG---------KLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spd 252 (751)
|+| ++.|+....+ ..|.+||+.+ ++.... +. ....+..+.|+|+
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~------------~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLNSNN------------TK-VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESCSSS------------SS-SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCeeeE------------Ee-eCCceEEEEecCC
Confidence 999 8888766443 3688998864 322111 01 2234668999999
Q ss_pred CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCce-EeEeeceeEE-EEEec-CCceEEEeeeecccceeEEEec
Q 004475 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFS-VSWCD-DSLALVNETWYKTSQTRTWLVC 329 (751)
Q Consensus 253 G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l~~~~~~~~-~~~sp-dg~~l~~~~~~~~~~~~l~~~~ 329 (751)
+ ++... ..+.|+++++......... ........+. +.|+| |++.|+.... .+.-.||.++
T Consensus 162 ~---l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~--dg~i~i~~~~ 224 (342)
T 1yfq_A 162 R---LIVGM------------NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI--DGRVAVEFFD 224 (342)
T ss_dssp E---EEEEE------------STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET--TSEEEEEECC
T ss_pred c---EEEEe------------CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec--CCcEEEEEEc
Confidence 7 33332 2357888888520111122 2223345566 89999 9998887663 3334566565
Q ss_pred CCCCC--Ccceeeeecccc---------cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEE
Q 004475 330 PGSKD--VAPRVLFDRVFE---------NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL 398 (751)
Q Consensus 330 ~~~~~--~~~~~l~~~~~~---------~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 398 (751)
..+.. ............ .+.. ++|+|||+.|+..+.+ ..|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~d---------------------g~i~v 277 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS------IEFSPRHKFLYTAGSD---------------------GIISC 277 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE------EEECTTTCCEEEEETT---------------------SCEEE
T ss_pred CCCcccccccceeeecccccccccccceeEEE------EEEcCCCCEEEEecCC---------------------ceEEE
Confidence 54100 011222221111 1212 7899999998877722 26899
Q ss_pred EecCCCceeEEe
Q 004475 399 FDINTGSKERIW 410 (751)
Q Consensus 399 ~d~~~g~~~~l~ 410 (751)
||+.+++....+
T Consensus 278 wd~~~~~~~~~~ 289 (342)
T 1yfq_A 278 WNLQTRKKIKNF 289 (342)
T ss_dssp EETTTTEEEEEC
T ss_pred EcCccHhHhhhh
Confidence 999988764443
No 281
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.52 E-value=1.2e-11 Score=131.22 Aligned_cols=267 Identities=11% Similarity=0.076 Sum_probs=165.4
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|+++++.+++...+...... ..+..++|+|||+.|+..+.+
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~d--------------------------------- 155 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGN--------------------------------- 155 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETT---------------------------------
T ss_pred CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCC---------------------------------
Confidence 46899999999987666544221 147889999999999887542
Q ss_pred ccCCccchhhhhhheeeEEEEEcC-CC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (751)
+.|.++++ ++ ..+.+..+ ..+..++| +++.|+.... ...+.+||+.
T Consensus 156 ----------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------------dg~i~i~d~~ 204 (401)
T 4aez_A 156 ----------------GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR-------------SGAIHHHDVR 204 (401)
T ss_dssp ----------------SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET-------------TSEEEEEETT
T ss_pred ----------------CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC-------------CCCEEEEecc
Confidence 46777787 55 34455444 67788888 5666665543 3468899997
Q ss_pred Cc-e-eeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE
Q 004475 218 GK-L-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (751)
Q Consensus 218 ~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 295 (751)
.. . ...+.. ....+..+.|+|||+. ++... ..+.|.++++.. +.....+.
T Consensus 205 ~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~-l~s~~------------~d~~v~iwd~~~--~~~~~~~~ 256 (401)
T 4aez_A 205 IANHQIGTLQG-------------HSSEVCGLAWRSDGLQ-LASGG------------NDNVVQIWDARS--SIPKFTKT 256 (401)
T ss_dssp SSSCEEEEEEC-------------CSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEETTC--SSEEEEEC
T ss_pred cCcceeeEEcC-------------CCCCeeEEEEcCCCCE-EEEEe------------CCCeEEEccCCC--CCccEEec
Confidence 32 2 222222 1234568999999997 55543 235788888851 22223333
Q ss_pred eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecC
Q 004475 296 KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 374 (751)
Q Consensus 296 ~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 374 (751)
.....+. +.|+|++..++.+... .....|.++++.++ ......... ..+.. ++|+|||+.|+....
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~--~~~~~~~~~-~~v~~------~~~s~~~~~l~~~~g--- 323 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATG--ARVNTVDAG-SQVTS------LIWSPHSKEIMSTHG--- 323 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTC--CEEEEEECS-SCEEE------EEECSSSSEEEEEEC---
T ss_pred CCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCC--CEEEEEeCC-CcEEE------EEECCCCCeEEEEee---
Confidence 4455566 9999999887765521 12356888888774 222222221 11222 889999999888651
Q ss_pred CcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEE
Q 004475 375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 454 (751)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~ 454 (751)
.....|.+|++.+++...+...... ......++|+|||+.|+... . -+.|.
T Consensus 324 ----------------~~dg~i~v~~~~~~~~~~~~~~~~h---------~~~v~~~~~s~dg~~l~s~~-~---dg~i~ 374 (401)
T 4aez_A 324 ----------------FPDNNLSIWSYSSSGLTKQVDIPAH---------DTRVLYSALSPDGRILSTAA-S---DENLK 374 (401)
T ss_dssp ----------------TTTCEEEEEEEETTEEEEEEEEECC---------SSCCCEEEECTTSSEEEEEC-T---TSEEE
T ss_pred ----------------cCCCcEEEEecCCccceeEEEecCC---------CCCEEEEEECCCCCEEEEEe-C---CCcEE
Confidence 1233788899988766554332111 11122368999999777543 2 35789
Q ss_pred EEEcCCCcee
Q 004475 455 ILSWPLKKSS 464 (751)
Q Consensus 455 ~~~~~~g~~~ 464 (751)
++++.+++..
T Consensus 375 iw~~~~~~~~ 384 (401)
T 4aez_A 375 FWRVYDGDHV 384 (401)
T ss_dssp EEECCC----
T ss_pred EEECCCCccc
Confidence 9998877543
No 282
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.51 E-value=1.7e-13 Score=140.34 Aligned_cols=211 Identities=11% Similarity=-0.020 Sum_probs=124.4
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.+|..+.....-+ ++.|.||++||.+. +...|.. ....|+ ..|.|++ ++.+|+
T Consensus 28 ~~g~~l~y~~~G~--------g~~~~vvllHG~~~-----------~~~~w~~----~~~~L~-~~~~via---~Dl~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDSEK--------HAENAVIFLHGNAT-----------SSYLWRH----VVPHIE-PVARCII---PDLIGM 80 (318)
T ss_dssp ETTEEEEEEECCS--------CTTSEEEEECCTTC-----------CGGGGTT----TGGGTT-TTSEEEE---ECCTTS
T ss_pred eCCeEEEEEEcCC--------CCCCeEEEECCCCC-----------cHHHHHH----HHHHhh-hcCeEEE---EeCCCC
Confidence 3566665544321 12468999999642 1112221 122333 4578998 677788
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC----C
Q 004475 569 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT----L 640 (751)
Q Consensus 569 g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~----~ 640 (751)
|.+.... .......+|+.++++.+ +. .++.|+||||||.+|+.+|.++|++++++|++++..... .
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 154 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL------NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS------CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc------CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh
Confidence 8775431 22445555555554433 33 689999999999999999999999999999976432110 0
Q ss_pred CccC------cccc--------c-------------cc-chhhHHHH-----------------HhcCc-----------
Q 004475 641 TPFG------FQTE--------F-------------RT-LWEATNVY-----------------IEMSP----------- 664 (751)
Q Consensus 641 ~~~~------~~~~--------~-------------~~-~~~~~~~~-----------------~~~~~----------- 664 (751)
.+.. +... . .. .......+ ....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
T 2psd_A 155 WPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQ 234 (318)
T ss_dssp SCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHH
T ss_pred hhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHH
Confidence 0000 0000 0 00 00000000 00000
Q ss_pred -----ccccCCC-CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475 665 -----ITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 665 -----~~~~~~~-~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
...+.++ ++|+|+++|++| .++ . .++.+.+.+ ...+++++ +++|... .+....+.+.+.+||.+
T Consensus 235 ~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 235 IVRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKF----PNTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTS----SSEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhC----CCcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHH
Confidence 0123457 999999999999 876 5 555554333 34677778 6799765 67788999999999988
Q ss_pred HhcC
Q 004475 739 YCLS 742 (751)
Q Consensus 739 ~l~~ 742 (751)
....
T Consensus 305 ~~~~ 308 (318)
T 2psd_A 305 VLKN 308 (318)
T ss_dssp HHC-
T ss_pred hhcc
Confidence 7553
No 283
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.51 E-value=4e-14 Score=143.73 Aligned_cols=221 Identities=15% Similarity=0.121 Sum_probs=137.6
Q ss_pred ceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh------
Q 004475 480 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------ 552 (751)
Q Consensus 480 ~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 552 (751)
..+.+++.+. -+.....++|+|+++++. ..++|+|+++||..+ +.. .......+..
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~~ 73 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQI 73 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCSS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcCC
Confidence 4566667664 367899999999998653 246999999999421 100 0011223322
Q ss_pred CCeEEEEcCCCC----C---------CCCCC------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 004475 553 RRFAVLAGPSIP----I---------IGEGD------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF 613 (751)
Q Consensus 553 ~G~~v~~~~~~~----~---------~g~g~------~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~ 613 (751)
.+++||.++..+ + .|... ......+...+.+ +++.++.++..+++.+ +|+||||||+
T Consensus 74 ~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~---el~p~i~~~~~~~~~r-~i~G~S~GG~ 149 (331)
T 3gff_A 74 PKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEK---ELAPSIESQLRTNGIN-VLVGHSFGGL 149 (331)
T ss_dssp CCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHH---THHHHHHHHSCEEEEE-EEEEETHHHH
T ss_pred CCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHH---HHHHHHHHHCCCCCCe-EEEEECHHHH
Confidence 357777744310 0 01000 0011122222222 5566676766666644 7999999999
Q ss_pred HHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCC-------CC
Q 004475 614 MTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDD-------KV 686 (751)
Q Consensus 614 ~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~-------~v 686 (751)
+|+.++.++|+.|+++++++|.+.+... ......... +........|+++.||+.|. .+
T Consensus 150 ~al~~~~~~p~~F~~~~~~S~~~w~~~~---------~~~~~~~~~-----~~~~~~~~~~l~l~~G~~d~~~~~~~~~~ 215 (331)
T 3gff_A 150 VAMEALRTDRPLFSAYLALDTSLWFDSP---------HYLTLLEER-----VVKGDFKQKQLFMAIANNPLSPGFGVSSY 215 (331)
T ss_dssp HHHHHHHTTCSSCSEEEEESCCTTTTTT---------HHHHHHHHH-----HHHCCCSSEEEEEEECCCSEETTTEECCH
T ss_pred HHHHHHHhCchhhheeeEeCchhcCChH---------HHHHHHHHH-----hhcccCCCCeEEEEeCCCCCCCccchHHH
Confidence 9999999999999999999997532110 000000111 11112245899999999998 46
Q ss_pred CCChHHHHHHHHHHHhC---CCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 687 GLFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 687 p~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
+ ...+++++++|++. |.++++.++|+++|.... ...+...++||-....
T Consensus 216 ~--~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 216 H--KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp H--HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred H--HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 6 77889999999875 678999999999998642 2344555666655443
No 284
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.51 E-value=2.1e-12 Score=135.40 Aligned_cols=224 Identities=13% Similarity=0.061 Sum_probs=140.0
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC---eeeccCCCCccccceeeeeEEecCCcEEEEeecCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~---~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 108 (751)
.+...+|||||+.||+. .....|+++++++++ ...+..... .+..++|+|||+.|+..+.+
T Consensus 10 ~i~~~~~s~~~~~l~~~----------~~d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d- 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAIC----------PNNHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCGTD- 73 (372)
T ss_dssp CCCEEEECTTSSEEEEE----------CSSSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEETT-
T ss_pred CeEEEEECCCCCEEEEE----------eCCCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEcCC-
Confidence 58899999999999885 234678888888875 333322222 47789999999999887432
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecCCC-ceEEeeeeC
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPS 183 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt~~-~~~~~~~~S 183 (751)
..|.++++ +++. ..+..+ ..+..++|+
T Consensus 74 ------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 74 ------------------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ------------------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ------------------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 35666777 5532 222333 678899999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee----eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEE
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV----RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~ 259 (751)
|||++|+....+ ..+.+|+.+.+.. ..+.. .....+..+.|+|||+. ++.
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~-l~~ 159 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKK------------PIRSTVLSLDWHPNSVL-LAA 159 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECT------------TCCSCEEEEEECTTSSE-EEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeec------------ccCCCeeEEEEcCCCCE-EEE
Confidence 999999887543 3577888875542 11110 11234668999999987 555
Q ss_pred EEeccCCCCccccCcccceeeccCCC----------------CCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccc
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEP----------------AEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~----------------~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
.. ..+.++++++.. ..+.....+......+. +.|+|||+.|+.... .
T Consensus 160 ~~------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d 223 (372)
T 1k8k_C 160 GS------------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----D 223 (372)
T ss_dssp EE------------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----T
T ss_pred Ec------------CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC----C
Confidence 43 234677777420 01122223334455667 999999998887662 2
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEe
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 369 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~ 369 (751)
..|.++++.++ ............+.. ++|+|||+.|+..
T Consensus 224 ~~i~i~d~~~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 224 STVCLADADKK--MAVATLASETLPLLA------VTFITESSLVAAG 262 (372)
T ss_dssp TEEEEEEGGGT--TEEEEEECSSCCEEE------EEEEETTEEEEEE
T ss_pred CEEEEEECCCC--ceeEEEccCCCCeEE------EEEecCCCEEEEE
Confidence 35666777664 222222222222222 7899999876654
No 285
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.51 E-value=2.3e-12 Score=128.12 Aligned_cols=216 Identities=13% Similarity=0.118 Sum_probs=130.0
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCC--------CC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------IP 564 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~--------~~ 564 (751)
.+.+.+++|.+. ++|.|+||-+||+.+ ...+||+++..+. .+
T Consensus 91 ~~~~~i~lP~~~----~~p~Pvii~i~~~~~--------------------------~~~~G~a~~~~~~~~v~~~~~~g 140 (375)
T 3pic_A 91 SFTVTITYPSSG----TAPYPAIIGYGGGSL--------------------------PAPAGVAMINFNNDNIAAQVNTG 140 (375)
T ss_dssp EEEEEEECCSSS----CSSEEEEEEETTCSS--------------------------CCCTTCEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCCC----CCCccEEEEECCCcc--------------------------ccCCCeEEEEecccccccccCCC
Confidence 689999999763 357999999998521 0347999987432 11
Q ss_pred CCCCCCC------CCCchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 565 IIGEGDK------LPNDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 565 ~~g~g~~------~~~~~~~~~~~~d~~~~v~~l~~~~--~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
.+|+|.- ...........-++.++++||++++ .||++||+++|||+||.+|+++++.. ++|+++|+.++..
T Consensus 141 s~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 141 SRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGA 219 (375)
T ss_dssp GTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCT
T ss_pred CccceecccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCC
Confidence 2232210 0011112233568999999999998 89999999999999999999999999 6899999988643
Q ss_pred CCCCC-c-------cCcccc------cccchhhHHHHHhcC------ccc---ccCC-CCCCEEEEEcCCCCCCCCChHH
Q 004475 637 NKTLT-P-------FGFQTE------FRTLWEATNVYIEMS------PIT---HANK-IKKPILIIHGEVDDKVGLFPMQ 692 (751)
Q Consensus 637 d~~~~-~-------~~~~~~------~~~~~~~~~~~~~~~------~~~---~~~~-~~~P~li~~G~~D~~vp~~~~~ 692 (751)
+-... . ++.... ....|... .+..+. |+. .+.- ...|+|++.| +|..++ +..
T Consensus 220 ~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~-~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~~g 295 (375)
T 3pic_A 220 GGSACWRISDYLKSQGANIQTASEIIGEDPWFST-TFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--PQS 295 (375)
T ss_dssp TTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCG-GGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--HHH
T ss_pred CchhhhhhhhhhcccCccccccccccCccccccc-chhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--cHH
Confidence 31100 0 000000 00122211 111111 111 0111 2478999999 888877 665
Q ss_pred HHHHHHHH----HhCC--CcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCCCCCC
Q 004475 693 AERFFDAL----KGHG--ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDG 747 (751)
Q Consensus 693 ~~~~~~~l----~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~ 747 (751)
....+.++ +..| .++.+.+..+.+|... .. .....+.+||+++|+....+.
T Consensus 296 ~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~f-p~---~~~~~~~~F~~k~L~~~~~~t 352 (375)
T 3pic_A 296 CFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAF-PS---NQQSQLTAFVQKFLLGQSTNT 352 (375)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCC-CG---GGHHHHHHHHHHHTSCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeeCCCccccC-CH---HHHHHHHHHHHHHhCCCCCCC
Confidence 54443333 3334 3567765444556332 12 234688999999998754443
No 286
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.50 E-value=1.7e-12 Score=134.68 Aligned_cols=289 Identities=10% Similarity=-0.029 Sum_probs=154.2
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|+++|+.+ ++......++.......++|||||++++++. .....|+++++++++..........
T Consensus 20 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---------~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 20 PNNLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------NHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TTEEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCeEEEEECCC----CcEEEEEecCCCCCCceeEECCCCCEEEEEe---------CCCCcEEEEeCCCCcEEEEEEcccc
Confidence 45799999988 8776544333311467899999998887754 3457899999998875543222110
Q ss_pred --cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 84 --CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 84 --~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.....+..++|||||++|++......... ..+. .....|++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-----------------------~~~~--------------~~~~~i~~ 129 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLN-----------------------DHYV--------------VKPPRLEV 129 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECS-----------------------SCEE--------------ECCCEEEE
T ss_pred cccccccccceEECCCCCEEEEEcccccccc-----------------------cccc--------------cCCCeEEE
Confidence 00002457899999999998743100000 0000 01157889
Q ss_pred EcC-CCCcee----cCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCc
Q 004475 162 GSL-DGTAKD----FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (751)
Q Consensus 162 ~~~-~G~~~~----lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 236 (751)
+|+ +|+... +..+..+..++|+|||+ |++. ..++++||+.+++.......... ..+..
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~---------------~~~i~~~d~~~~~~~~~~~~~~~-~~~~~ 192 (349)
T 1jmx_B 130 FSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA---------------GPDIYKMDVKTGKYTVALPLRNW-NRKGY 192 (349)
T ss_dssp EEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE---------------SSSEEEECTTTCCEEEEECSTTC-CCTTB
T ss_pred EECCCccccceeeeccCCCcccceeECCCCc-EEEc---------------cCcEEEEeCCCCceecccccccc-CCccc
Confidence 998 553222 22224456777999999 6663 12488999987655432221110 00000
Q ss_pred cCCc---------cC----CCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe--eceeE
Q 004475 237 YNSV---------RE----GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRF 301 (751)
Q Consensus 237 ~~~~---------~~----~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~ 301 (751)
.... .. ....+.+++|+.. ... .......+..++.. .+..+.+.. .....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ-DPA-----------TADLLYGYLSVDLK---TGKTHTQEFADLTELY 257 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC--------C-----------CCEEEEEEEEEETT---TCCEEEEEEEECSSCE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcC-Ccc-----------ccccceeEEEEecc---CCcEEecccccCCCcc
Confidence 0000 00 0112334444322 000 00011123335543 233333221 22234
Q ss_pred E-EEEec-CCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceE
Q 004475 302 S-VSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 379 (751)
Q Consensus 302 ~-~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 379 (751)
. +.||| ||+.|+.. ...|+++++.++ +......... ... .++|+|||+.|++...
T Consensus 258 ~~~~~sp~dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~~-~~~------~~~~s~dg~~l~~~~~-------- 314 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV------LNRLAKYDLKQR--KLIKAANLDH-TYY------CVAFDKKGDKLYLGGT-------- 314 (349)
T ss_dssp EEEEECSSCTTEEEEE------ESEEEEEETTTT--EEEEEEECSS-CCC------EEEECSSSSCEEEESB--------
T ss_pred eeeEecCCCCCEEEEE------cCeEEEEECccC--eEEEEEcCCC-Ccc------ceEECCCCCEEEEecC--------
Confidence 4 88999 99988776 247999998874 2222222111 111 1789999998887441
Q ss_pred EEEccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 380 ILLNGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
...|.+||+++++....+
T Consensus 315 -------------~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 315 -------------FNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp -------------SSEEEEEETTTTEEEEEE
T ss_pred -------------CCeEEEEeccccceeeee
Confidence 237899999888754443
No 287
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.50 E-value=1.9e-13 Score=135.95 Aligned_cols=194 Identities=14% Similarity=0.144 Sum_probs=113.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCch-hHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVE 590 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~ 590 (751)
.|.||++||.+. +...| ......|+++||.|++ ++.+|+|.+..... ...+..+|+.+.++
T Consensus 16 ~~~vvllHG~~~-----------~~~~w----~~~~~~L~~~~~~vi~---~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~ 77 (264)
T 1r3d_A 16 TPLVVLVHGLLG-----------SGADW----QPVLSHLARTQCAALT---LDLPGHGTNPERHCDNFAEAVEMIEQTVQ 77 (264)
T ss_dssp BCEEEEECCTTC-----------CGGGG----HHHHHHHTTSSCEEEE---ECCTTCSSCC-------CHHHHHHHHHHH
T ss_pred CCcEEEEcCCCC-----------CHHHH----HHHHHHhcccCceEEE---ecCCCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 488999999641 11111 1334455558999999 67778888754221 12233333333333
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHH---HHHhCCCceeEEEEccCCCCCCCCc-----------cC--cc----cc--
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAH---LLAHAPHLFCCGIARSGSYNKTLTP-----------FG--FQ----TE-- 648 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~---~a~~~p~~~~~~v~~~~~~d~~~~~-----------~~--~~----~~-- 648 (751)
. . .++..++.|+||||||.+|+. +|.++|++++++|+.++........ +. +. ..
T Consensus 78 ~---l-~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1r3d_A 78 A---H-VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVL 153 (264)
T ss_dssp T---T-CCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred H---h-CcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHH
Confidence 2 2 222223999999999999999 8888999999999887643211000 00 00 00
Q ss_pred ----cccchh-----h------------H----HHHHhc------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH
Q 004475 649 ----FRTLWE-----A------------T----NVYIEM------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 697 (751)
Q Consensus 649 ----~~~~~~-----~------------~----~~~~~~------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~ 697 (751)
....+. . . ..+... .....+.++++|+|+++|++|..++ .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~ 226 (264)
T 1r3d_A 154 SDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLA 226 (264)
T ss_dssp HHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHH
T ss_pred HHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHH
Confidence 000000 0 0 000000 1112345789999999999997532 223
Q ss_pred HHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 698 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
+.+. +++++++++||... .+..+.+.+.+.+|+.++.
T Consensus 227 ~~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 227 ESSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 3321 46899999999875 5667889999999998754
No 288
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.50 E-value=7e-12 Score=133.90 Aligned_cols=267 Identities=13% Similarity=0.093 Sum_probs=165.2
Q ss_pred ceeEEeecCCCCCCCCcccccCCCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
..|++||+.+ |+..++-.+.. ...+...+|||||++||... ..+.|.++++.+++..+...+...
T Consensus 125 ~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs----------~Dg~v~iWd~~~~~~~~~~~~h~~ 190 (420)
T 4gga_A 125 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----------SSAEVQLWDVQQQKRLRNMTSHSA 190 (420)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEE----------CCCeEEEEEcCCCcEEEEEeCCCC
Confidence 4699999999 98877644433 33588999999999998853 346788888888775443332221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+. +++++++.|+..+.+ ..+++++
T Consensus 191 ----~v~--~~s~~~~~l~sgs~d-------------------------------------------------~~i~~~d 215 (420)
T 4gga_A 191 ----RVG--SLSWNSYILSSGSRS-------------------------------------------------GHIHHHD 215 (420)
T ss_dssp ----CEE--EEEEETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----ceE--EEeeCCCEEEEEeCC-------------------------------------------------CceeEee
Confidence 123 455577777766432 3566666
Q ss_pred C-CC--CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 164 L-DG--TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 164 ~-~G--~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
. .. ....+..+ ..+....|+|+|++++....+ ..+.+|+...++...... .....
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-------------~~v~i~~~~~~~~~~~~~--------~~~~~ 274 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPL--------QTFTQ 274 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCCSSCSCCS--------EEECC
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeecc-------------ccceEEeeccccccceee--------eeecc
Confidence 6 22 23344444 677889999999998876544 357788887653221000 00111
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY 318 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~ 318 (751)
....+..++|+|++..+++..... ..+.|.++++. .+...........+. ..|+|+++.|+.++..
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs----------~D~~I~iwd~~---t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGT----------SDRHIRIWNVC---SGACLSAVDAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECT----------TTCEEEEEETT---TTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceeeeeeCCCcccEEEEEeec----------CCCEEEEEeCC---ccccceeeccccceeeeeecCCCCeEEEEEec
Confidence 223356889999999844443311 23578888875 333333333344455 8899999999877632
Q ss_pred cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEE
Q 004475 319 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL 398 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 398 (751)
. ...|.+.+..++ ............+.. ++|||||+.|+..+.+ ..|++
T Consensus 342 ~--d~~I~iwd~~~~--~~v~~l~gH~~~V~~------l~~spdg~~l~S~s~D---------------------~tvri 390 (420)
T 4gga_A 342 A--QNQLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAAAD---------------------ETLRL 390 (420)
T ss_dssp T--TCCEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEETT---------------------TEEEE
T ss_pred C--CCEEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEecC---------------------CeEEE
Confidence 2 345777777764 222222222233333 8899999999887733 26888
Q ss_pred EecCCCc
Q 004475 399 FDINTGS 405 (751)
Q Consensus 399 ~d~~~g~ 405 (751)
||+....
T Consensus 391 Wdv~~~~ 397 (420)
T 4gga_A 391 WRCFELD 397 (420)
T ss_dssp ECCSCSS
T ss_pred EECCCCC
Confidence 8886543
No 289
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.50 E-value=9.8e-13 Score=139.77 Aligned_cols=184 Identities=10% Similarity=0.141 Sum_probs=109.4
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~ 254 (751)
..+..++|||||++|+..+.++ .+.+|+.++ ....+. +.. +. ....+..++|||||+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-------------~V~iwd~~~-~l~~l~-~~~----~~----~~~sv~svafSPDG~ 142 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-------------NVSVFKDNK-MLTNLD-SKG----NL----SSRTYHCFEWNPIES 142 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-------------CEEEEETTE-EEEECC-CSS----CS----TTTCEEEEEECSSSS
T ss_pred CcEEEEEECCCCCEEEEEeCCC-------------cEEEEeCCc-eeeecc-CCC----cc----ccccEEEEEEcCCCC
Confidence 6788999999999999886553 578898654 222221 110 00 012466899999999
Q ss_pred ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc--------eEeE----eeceeEE-EEEecCCceEEEeeeeccc
Q 004475 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP--------EILH----KLDLRFS-VSWCDDSLALVNETWYKTS 321 (751)
Q Consensus 255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~l~----~~~~~~~-~~~spdg~~l~~~~~~~~~ 321 (751)
. |+..+ ..+.|.++++. ++.. ..+. .+...+. ++||||| |+.++.
T Consensus 143 ~-LAsgs------------~DGtVkIWd~~---~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~---- 200 (588)
T 2j04_A 143 S-IVVGN------------EDGELQFFSIR---KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS---- 200 (588)
T ss_dssp C-EEEEE------------TTSEEEEEECC---CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----
T ss_pred E-EEEEc------------CCCEEEEEECC---CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC----
Confidence 8 67654 34688888886 3321 2221 1123455 9999999 544331
Q ss_pred ceeEEEecCCCCCCc--ceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEE
Q 004475 322 QTRTWLVCPGSKDVA--PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 399 (751)
Q Consensus 322 ~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 399 (751)
...+.+.+++++... .+.+.......+.. ++|+ |+.|+..+. ..|.+|
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s------vaFs--g~~LASa~~----------------------~tIkLW 250 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASRRKITD------LKIV--DYKVVLTCP----------------------GYVHKI 250 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCSSCCCC------EEEE--TTEEEEECS----------------------SEEEEE
T ss_pred CCeEEEEECCCCccccceeeecccccCcEEE------EEEE--CCEEEEEeC----------------------CeEEEE
Confidence 346667777774211 11232222233333 8899 677776651 279999
Q ss_pred ecCCCceeEEeeccchhhhhceeeeecCCcceee--ccCCCEEEEEE
Q 004475 400 DINTGSKERIWESNREKYFETAVALVFGQGEEDI--NLNQLKILTSK 444 (751)
Q Consensus 400 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~ 444 (751)
|+.+++...+.... ......+++ |||++.|+.+.
T Consensus 251 d~~~~~~~~~~~gh-----------~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 251 DLKNYSISSLKTGS-----------LENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp ETTTTEEEEEECSC-----------CSCCCEEEETTCSSCEEEEECS
T ss_pred ECCCCeEEEEEcCC-----------CceEEEEEeeeCCCCCEEEEEc
Confidence 99887764443221 111223578 99997766554
No 290
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.50 E-value=1.3e-11 Score=130.71 Aligned_cols=253 Identities=10% Similarity=-0.034 Sum_probs=152.2
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC-------eeeccCCCCccccceeeeeEEecC----C--
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNN----S-- 98 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-------~~~lt~~~~~~~~~~~~~~~wspD----g-- 98 (751)
.+...+|+| +.|+.. ...+.|.++++++++ ...+..... .+..++|+|+ |
T Consensus 18 ~i~~~~~~~--~~l~s~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSC----------SGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp CEEEEEECS--SEEEEE----------ETTSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred CeEEEEecC--CeEEEE----------cCCCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 578899999 666664 334688888988877 344432222 4778999999 9
Q ss_pred -cEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC------cee
Q 004475 99 -TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT------AKD 170 (751)
Q Consensus 99 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~------~~~ 170 (751)
+.|+..+.+ ..|.++++ +++ ...
T Consensus 81 ~~~l~s~~~d-------------------------------------------------g~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTSFS-------------------------------------------------GDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEETT-------------------------------------------------SCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEcCC-------------------------------------------------CCEEEEEccCCccccccccee
Confidence 888877432 35666676 443 455
Q ss_pred cCCC------ceEEeeeeC----CCCce-EEEEEecCCcccccccCCCceeEEEEeCCC------ceeeeeccC-CCCCC
Q 004475 171 FGTP------AVYTAVEPS----PDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELCDL-PPAED 232 (751)
Q Consensus 171 lt~~------~~~~~~~~S----pDG~~-i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------~~~~~l~~~-~~~~~ 232 (751)
+..+ ..+..++|+ |||+. |+....+ ..+++||+.+ ++...+... ....
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~- 177 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQG- 177 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEE-
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeee-
Confidence 5444 567899999 99999 7665433 3588898876 322210000 0000
Q ss_pred CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc-eEeEe---e---ceeEE-EE
Q 004475 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK---L---DLRFS-VS 304 (751)
Q Consensus 233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~---~---~~~~~-~~ 304 (751)
...........+..+.|+|+| . ++... ..+.|+++++. .... ..+.. . ...+. +.
T Consensus 178 ~~~~~~~~~~~i~~~~~~~~~-~-l~~~~------------~dg~i~i~d~~---~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 178 TVESPMTPSQFATSVDISERG-L-IATGF------------NNGTVQISELS---TLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp EECCSSSSCCCCCEEEECTTS-E-EEEEC------------TTSEEEEEETT---TTEEEEEEECCC---CCCCCEEEEE
T ss_pred eeccccCCCCCceEEEECCCc-e-EEEEe------------CCCcEEEEECC---CCceeEEEeccccccccCCccceEE
Confidence 000001123346789999999 5 66543 33678888885 2222 23333 3 55667 99
Q ss_pred EecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec-------------ccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-------------VFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
|+||++.|+..... +....|.++++.++ ........ ....+.. ++|+|||++|+..+.
T Consensus 241 ~~~~~~~l~~~~~d-~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 241 FSPQGSLLAIAHDS-NSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMS------LSFNDSGETLCSAGW 311 (397)
T ss_dssp ECSSTTEEEEEEEE-TTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEE------EEECSSSSEEEEEET
T ss_pred ECCCCCEEEEEecC-CCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEE------EEECCCCCEEEEEeC
Confidence 99999998876632 11146778887764 22222222 1122222 789999999888773
Q ss_pred ecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 372 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
+ ..|++||+.+++....+.
T Consensus 312 d---------------------g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 312 D---------------------GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp T---------------------SEEEEEETTTTEEEEEEE
T ss_pred C---------------------CeEEEEEcCCCceeEEEe
Confidence 2 378999998887655554
No 291
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.50 E-value=2.2e-12 Score=141.63 Aligned_cols=290 Identities=14% Similarity=0.089 Sum_probs=171.3
Q ss_pred ceeEEeec--CCCCCCCCcccccCCCCcccccceeecC----CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeecc
Q 004475 5 TGIGIHRL--LPDDSLGPEKEVHGYPDGAKINFVSWSP----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (751)
Q Consensus 5 ~~~~~~~~--~~~~~~g~~~~l~~~~~~~~~~~p~~SP----DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt 78 (751)
..|.++|+ .+ ++.... ++.+......+||| ||++|+.... ....|.++|..+++..+..
T Consensus 200 ~~V~v~D~~~~t----~~~~~~--i~~g~~p~~va~sp~~~~dg~~l~v~~~---------~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 200 ARIDMIDLWAKE----PTKVAE--IKIGIEARSVESSKFKGYEDRYTIAGAY---------WPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp SEEEEEETTSSS----CEEEEE--EECCSEEEEEEECCSTTCTTTEEEEEEE---------ESSEEEEEETTTCCEEEEE
T ss_pred CeEEEEECcCCC----CcEEEE--EecCCCcceEEeCCCcCCCCCEEEEEEc---------cCCeEEEEeccccccceee
Confidence 45889999 45 554332 33444678899999 9999877542 2367889999888765443
Q ss_pred CCCCc-----ccc--ceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhh
Q 004475 79 ESPDI-----CLN--AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (751)
Q Consensus 79 ~~~~~-----~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (751)
..... .++ +.+..+.+|||++.+++....
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-------------------------------------------- 300 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-------------------------------------------- 300 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT--------------------------------------------
T ss_pred cccCcccCccccccCCceEEEEECCCCCEEEEEECC--------------------------------------------
Confidence 22110 001 125678999999887776321
Q ss_pred hhheeeEEEEEcC-CCCc-e--ecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccC
Q 004475 152 DYYTTAQLVLGSL-DGTA-K--DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL 227 (751)
Q Consensus 152 ~~~~~~~l~~~~~-~G~~-~--~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 227 (751)
...|+++|+ +++. + .+........+.|+|||++|++.... ...|.+||+.+++.......
T Consensus 301 ----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~------------~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 301 ----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN------------SNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp ----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEEC
T ss_pred ----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC------------CCeEEEEECCCCeEEEeecc
Confidence 157888988 4432 2 33222456678999999999876543 34688999988765543221
Q ss_pred CCCCCCCCccCCccCCCceee-eecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC-----CCCceEeEeeceeE
Q 004475 228 PPAEDIPVCYNSVREGMRSIS-WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-----GEKPEILHKLDLRF 301 (751)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~l~~~~~~~ 301 (751)
. ..| ...+... ++|++.. ++.+... ..+.|.++++++.. ....+.+.......
T Consensus 365 g---~~p-------h~g~g~~~~~p~~g~-~~~s~~~----------~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~ 423 (543)
T 1nir_A 365 G---KTP-------HPGRGANFVHPKYGP-VWSTSHL----------GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS 423 (543)
T ss_dssp S---SSB-------CCTTCEEEEETTTEE-EEEEEBS----------SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred C---CCC-------CCCCCcccCCCCCcc-EEEeccC----------CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc
Confidence 0 001 0011233 4788766 5443311 12467888875311 11223333222233
Q ss_pred E-EEEecCCceEEEeeeecc---cceeEEEecCCCCCCcceeeee-------cccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 302 S-VSWCDDSLALVNETWYKT---SQTRTWLVCPGSKDVAPRVLFD-------RVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 302 ~-~~~spdg~~l~~~~~~~~---~~~~l~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
. +.++|||+.|+....... ....|.++|.++.+...+.+.- .....+.. +.|+|||+.|++..
T Consensus 424 ~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 424 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ------PEYNKRGDEVWFSV 497 (543)
T ss_dssp CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEE------EEECSSSSEEEEEE
T ss_pred eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEe------ccCCCCCCEEEEEe
Confidence 4 889999999987652111 2457888888876322123210 11122222 88999999999876
Q ss_pred eecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeec
Q 004475 371 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 412 (751)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 412 (751)
+.. ......|.+||.+|++.......
T Consensus 498 ~~~----------------~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 498 WNG----------------KNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp ECC----------------TTSCCEEEEEETTTTEEEEEECC
T ss_pred ecC----------------CCCCCeEEEEECCCceEEEeecC
Confidence 320 11234788999999988766553
No 292
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.49 E-value=3.1e-12 Score=156.65 Aligned_cols=340 Identities=10% Similarity=0.007 Sum_probs=191.3
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|.++++.+ +.............+...+|||||+.++.. ...+.|.++++.++.......+...
T Consensus 819 ~~v~~~d~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~----------~~dg~v~vwd~~~~~~~~~~~~h~~- 883 (1249)
T 3sfz_A 819 NKVLLFDIHT----SGLLAEIHTGHHSTIQYCDFSPYDHLAVIA----------LSQYCVELWNIDSRLKVADCRGHLS- 883 (1249)
T ss_dssp TEEEEEETTT----CCEEEEEECSSSSCCCEEEECSSTTEEEEE----------CSSSCEEEEETTTTEEEEEECCCSS-
T ss_pred CcEEEEEecC----CCceeEEcCCCCCceEEEEEcCCCCEEEEE----------eCCCeEEEEEcCCCceeeecCCCcc-
Confidence 4688899887 666544322334468899999999999885 3346788888888765443332221
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccc--cchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNII--ISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
.+..++|+|||+.|+..+.++.-.. ++ ........ ...........+.............+..+
T Consensus 884 ---~v~~v~~spdg~~l~s~s~dg~v~v---w~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1249)
T 3sfz_A 884 ---WVHGVMFSPDGSSFLTASDDQTIRV---WE--------TKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLI 949 (1249)
T ss_dssp ---CEEEEEECTTSSEEEEEETTSCEEE---EE--------HHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEE
T ss_pred ---ceEEEEECCCCCEEEEEeCCCeEEE---EE--------ccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEE
Confidence 4778999999999988765422110 00 00000000 00000000000000000000000011111
Q ss_pred cC-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475 163 SL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (751)
Q Consensus 163 ~~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (751)
.. ++..... ....+..++|||||+++++...+ ..+++|+..++...... ....
T Consensus 950 ~~~~~~~~~~-~~~~i~~~~~sp~g~~l~~g~~~-------------g~i~i~d~~~~~~~~~~------------~~h~ 1003 (1249)
T 3sfz_A 950 AGKTGQIDYL-PEAQVSCCCLSPHLEYVAFGDED-------------GAIKIIELPNNRVFSSG------------VGHK 1003 (1249)
T ss_dssp EESSCCEEEE-CCSCEEEEEECTTSSEEEEEETT-------------SCCEEEETTTTSCEEEC------------CCCS
T ss_pred ecCcceEEEc-ccCcEEEEEEcCCCCEEEEEcCC-------------CCEEEEEcCCCceeeec------------ccCC
Confidence 11 2221111 12457789999999999886543 35789998766443221 1122
Q ss_pred CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc
Q 004475 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT 320 (751)
Q Consensus 242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~ 320 (751)
..+..++|+|||+. ++..+ ..+.|.++++. .+....+......+. +.|+|+++.++.+.
T Consensus 1004 ~~v~~l~~s~dg~~-l~s~~------------~dg~i~vwd~~---~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~---- 1063 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKT-LISSS------------EDSVIQVWNWQ---TGDYVFLQAHQETVKDFRLLQDSRLLSWSF---- 1063 (1249)
T ss_dssp SCCCCEEECSSSSC-EEEEC------------SSSBEEEEETT---TTEEECCBCCSSCEEEEEECSSSEEEEEES----
T ss_pred CceEEEEECCCCCE-EEEEc------------CCCEEEEEECC---CCceEEEecCCCcEEEEEEcCCCcEEEEEC----
Confidence 34668999999998 55543 23578888875 333334445556667 89999887554433
Q ss_pred cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEe
Q 004475 321 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFD 400 (751)
Q Consensus 321 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 400 (751)
...|.+.+..++ ............+.. ++|||||+.|+..+.+ ..|++||
T Consensus 1064 -dg~v~vwd~~~~--~~~~~~~~~~~~v~~------~~~s~d~~~l~s~s~d---------------------~~v~iwd 1113 (1249)
T 3sfz_A 1064 -DGTVKVWNVITG--RIERDFTCHQGTVLS------CAISSDATKFSSTSAD---------------------KTAKIWS 1113 (1249)
T ss_dssp -SSEEEEEETTTT--CCCEEEECCSSCCCC------EEECSSSSSCEEECCS---------------------SCCCEEC
T ss_pred -CCcEEEEECCCC--ceeEEEcccCCcEEE------EEECCCCCEEEEEcCC---------------------CcEEEEE
Confidence 246777787775 222222222222222 8899999998887732 2688889
Q ss_pred cCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 401 INTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 401 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
+.+++.......... .+ ..++|||||+.|+.... -+.|.++|+.+++..
T Consensus 1114 ~~~~~~~~~l~~h~~----~v-------~~~~~s~dg~~lat~~~----dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1114 FDLLSPLHELKGHNG----CV-------RCSAFSLDGILLATGDD----NGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp SSSSSCSBCCCCCSS----CE-------EEEEECSSSSEEEEEET----TSCCCEEESSSSCCC
T ss_pred CCCcceeeeeccCCC----cE-------EEEEECCCCCEEEEEeC----CCEEEEEECCCCceE
Confidence 887765433222110 11 23589999998776542 244888898877643
No 293
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.49 E-value=4.3e-12 Score=131.54 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=152.0
Q ss_pred cceeEEeecCCCCCCCCcc--cccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEK--EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~--~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
...|.+|++.+ ++.. .+........+...+|||||++||..+. + ..+.++++.+++.+.+....
T Consensus 37 D~~i~iw~~~~----~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~--------D--~~v~iw~~~~~~~~~~~~~~ 102 (345)
T 3fm0_A 37 DRRIRIWGTEG----DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF--------D--ATTCIWKKNQDDFECVTTLE 102 (345)
T ss_dssp TSCEEEEEEET----TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET--------T--SCEEEEEECCC-EEEEEEEC
T ss_pred CCeEEEEEcCC----CcceeeeeeccccCCcEEEEEECCCCCEEEEEEC--------C--CcEEEEEccCCCeEEEEEcc
Confidence 34689999977 6432 1111122336889999999999988642 3 44555555555433222112
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.+ ...+..++|+|||+.|+..+.+ ..|.+
T Consensus 103 ~h--~~~v~~v~~sp~~~~l~s~s~D-------------------------------------------------~~v~i 131 (345)
T 3fm0_A 103 GH--ENEVKSVAWAPSGNLLATCSRD-------------------------------------------------KSVWV 131 (345)
T ss_dssp CC--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEE
T ss_pred CC--CCCceEEEEeCCCCEEEEEECC-------------------------------------------------CeEEE
Confidence 11 1147789999999999887543 34566
Q ss_pred EcC-CC-C---ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475 162 GSL-DG-T---AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (751)
Q Consensus 162 ~~~-~G-~---~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (751)
+++ ++ . ...+..+ ..+..++|+|||++|+..+.+ ..+.+|+..+++...+...
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-------------~~i~~w~~~~~~~~~~~~~-------- 190 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD-------------DTVKLYREEEDDWVCCATL-------- 190 (345)
T ss_dssp EEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT-------------SCEEEEEEETTEEEEEEEE--------
T ss_pred EECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC-------------CcEEEEEecCCCEEEEEEe--------
Confidence 666 33 2 2233344 678899999999998876544 2577888776543222111
Q ss_pred ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCC-CCCCC---------CceEeEe----eceeE
Q 004475 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAE-PAEGE---------KPEILHK----LDLRF 301 (751)
Q Consensus 236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~---------~~~~l~~----~~~~~ 301 (751)
......+..++|+|||+. |+..+ ..+.|.+++.. +.... ....+.. ....+
T Consensus 191 --~~h~~~v~~l~~sp~g~~-l~s~s------------~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 255 (345)
T 3fm0_A 191 --EGHESTVWSLAFDPSGQR-LASCS------------DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTI 255 (345)
T ss_dssp --CCCSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCE
T ss_pred --cCCCCceEEEEECCCCCE-EEEEe------------CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcE
Confidence 112234668999999997 55543 12345555431 00000 0011111 23345
Q ss_pred E-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee-ee----ecccccccCCCCCCCeeeCCCCC-EEEEeeeecC
Q 004475 302 S-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV-LF----DRVFENVYSDPGSPMMTRTSTGT-NVIAKIKKEN 374 (751)
Q Consensus 302 ~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~-l~----~~~~~~~~~~~~~~~~~~spDG~-~l~~~~~~~~ 374 (751)
. ++|+|++..|+.... ...-++|..+.......+.. +. ......+.. ++|+|++. .|+..+.+
T Consensus 256 ~~v~~~~~~~~l~s~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~------v~~~p~~~~~laS~s~D-- 325 (345)
T 3fm0_A 256 YDIAWCQLTGALATACG--DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNC------VAWNPKEPGLLASCSDD-- 325 (345)
T ss_dssp EEEEECTTTCCEEEEET--TSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEE------EEECSSSTTEEEEEETT--
T ss_pred EEEEEecCCCEEEEEeC--CCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeE------eEEeCCCceEEEEcCCC--
Confidence 6 899999999887663 33456776654332111111 11 111122222 88999985 66665522
Q ss_pred CcceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
..|++|++.+++
T Consensus 326 -------------------g~v~~W~~~~~~ 337 (345)
T 3fm0_A 326 -------------------GEVAFWKYQRPE 337 (345)
T ss_dssp -------------------SCEEEEEECC--
T ss_pred -------------------CcEEEEEecCCC
Confidence 268888887654
No 294
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.49 E-value=1.8e-11 Score=137.68 Aligned_cols=284 Identities=9% Similarity=0.081 Sum_probs=173.0
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCC----C-eeeccCCCCccccce-eeeeEEec--CCcEEEE
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----E-AKPLFESPDICLNAV-FGSFVWVN--NSTLLIF 103 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g----~-~~~lt~~~~~~~~~~-~~~~~wsp--Dg~~l~~ 103 (751)
.+...+|||||++||+.. ...|.+++++++ + .+.+..... . +..++||| ||++|+.
T Consensus 20 ~v~~~~~spdg~~l~~~~-----------~~~v~v~~~~~~~~~~~~~~~~~~h~~-----~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-----------GKSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-----------TTEEEEEECCSSCCSSCSEEEECTTTT-----SCEEEEEECSSTTCCEEEE
T ss_pred ceeEEEECCCCCEEEEec-----------CCeEEEEECCCCCCccccceEEecCCC-----ceEEEEEECcCCCCCEEEE
Confidence 578899999999999953 257888898877 4 344432222 4 68899999 9999988
Q ss_pred eecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC------C---ceecCC
Q 004475 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG------T---AKDFGT 173 (751)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G------~---~~~lt~ 173 (751)
...+ ..|.++++ +| + ...+..
T Consensus 84 ~~~d-------------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 84 GDES-------------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp EETT-------------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred ecCC-------------------------------------------------CEEEEEeCCCCcccccccccccchhhc
Confidence 7442 35666666 33 1 223333
Q ss_pred C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecC
Q 004475 174 P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (751)
Q Consensus 174 ~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spd 252 (751)
+ ..+..++|+|||++|+....+.. ....+++|+. +.....+.. ....+..+.|+|+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~---------~~~~v~~~d~-~~~~~~~~~-------------~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRD---------NFGVFISWDS-GNSLGEVSG-------------HSQRINACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSS---------CSEEEEETTT-CCEEEECCS-------------CSSCEEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCC---------CccEEEEEEC-CCcceeeec-------------CCccEEEEEECCC
Confidence 3 67889999999999998765421 1246788883 232333321 2234668999999
Q ss_pred CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece---eEE-EEEecC-CceEEEeeeecccceeEEE
Q 004475 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---RFS-VSWCDD-SLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 253 G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~---~~~-~~~spd-g~~l~~~~~~~~~~~~l~~ 327 (751)
|+.+++..+ ..+.+.++++.. +.....+..... .+. +.|+|| |+.|+.... ...|.+
T Consensus 172 ~~~~l~~~~------------~d~~v~vwd~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~v 233 (615)
T 1pgu_A 172 RPMRSMTVG------------DDGSVVFYQGPP--FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS----DRKISC 233 (615)
T ss_dssp SSCEEEEEE------------TTTEEEEEETTT--BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET----TCCEEE
T ss_pred CCcEEEEEe------------CCCcEEEEeCCC--cceeeeecccCCCCceEEEEEECCCCCCEEEEEeC----CCeEEE
Confidence 996344443 235788888741 122233333444 577 999999 998877652 246777
Q ss_pred ecCCCCCCcceeee-e---cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCC
Q 004475 328 VCPGSKDVAPRVLF-D---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 403 (751)
Q Consensus 328 ~~~~~~~~~~~~l~-~---~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 403 (751)
.++.++ +..... . .....+.. ++|+ ||+.|+..+.+ ..|.+||+.+
T Consensus 234 wd~~~~--~~~~~~~~~~~~~~~~v~~------~~~~-~~~~l~~~~~d---------------------~~i~~wd~~~ 283 (615)
T 1pgu_A 234 FDGKSG--EFLKYIEDDQEPVQGGIFA------LSWL-DSQKFATVGAD---------------------ATIRVWDVTT 283 (615)
T ss_dssp EETTTC--CEEEECCBTTBCCCSCEEE------EEES-SSSEEEEEETT---------------------SEEEEEETTT
T ss_pred EECCCC--CEeEEecccccccCCceEE------EEEc-CCCEEEEEcCC---------------------CcEEEEECCC
Confidence 777664 222222 1 22222222 7799 99988887732 3788999988
Q ss_pred CceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475 404 GSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 463 (751)
Q Consensus 404 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~ 463 (751)
++....+............. +.++ +++.++.... .+.++++|+.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~----~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVG-------VVAT-GNGRIISLSL----DGTLNFYELGHDEV 331 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEE-------EEEE-ETTEEEEEET----TSCEEEEETTEEEE
T ss_pred CcEEEEEcCCCCcccCceeE-------EEeC-CCCeEEEEEC----CCCEEEEECCCCcE
Confidence 87655544331100001111 2343 6666665432 34577788776543
No 295
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.49 E-value=1.1e-11 Score=128.89 Aligned_cols=246 Identities=9% Similarity=0.033 Sum_probs=149.3
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-------ee
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-------KP 76 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-------~~ 76 (751)
...|.+||+.+ ++.......+. ..+...+|||||+.||... ....+.++++..... +.
T Consensus 85 Dg~v~vWd~~~----~~~~~~~~~~~-~~v~~~~~sp~g~~lasg~----------~d~~i~v~~~~~~~~~~~~~~~~~ 149 (354)
T 2pbi_B 85 DGKVIVWDSFT----TNKEHAVTMPC-TWVMACAYAPSGCAIACGG----------LDNKCSVYPLTFDKNENMAAKKKS 149 (354)
T ss_dssp TSEEEEEETTT----CCEEEEEECSS-SCCCEEEECTTSSEEEEES----------TTSEEEEEECCCCTTCCSGGGCEE
T ss_pred CCeEEEEECCC----CCcceEEecCC-CCEEEEEECCCCCEEEEee----------CCCCEEEEEEecccccccccccee
Confidence 34688999877 66554332222 3588999999999998853 234555555543211 11
Q ss_pred ccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhee
Q 004475 77 LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (751)
Q Consensus 77 lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (751)
+.... ..+..++|+|+++.|+..+.+
T Consensus 150 ~~~h~-----~~v~~~~~~~~~~~l~t~s~D------------------------------------------------- 175 (354)
T 2pbi_B 150 VAMHT-----NYLSACSFTNSDMQILTASGD------------------------------------------------- 175 (354)
T ss_dssp EEECS-----SCEEEEEECSSSSEEEEEETT-------------------------------------------------
T ss_pred eeccC-----CcEEEEEEeCCCCEEEEEeCC-------------------------------------------------
Confidence 11111 136788999999988877542
Q ss_pred eEEEEEcC-CCCc-eecCCC-ceEEeeeeCC--CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC
Q 004475 157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (751)
Q Consensus 157 ~~l~~~~~-~G~~-~~lt~~-~~~~~~~~Sp--DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 231 (751)
..|.++|+ +|+. ..+..+ ..+..+.|+| +|+.|+..+.+ ..+.+||+.+++.....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D-------------g~v~~wd~~~~~~~~~~------ 236 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD-------------KKAMVWDMRSGQCVQAF------ 236 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT-------------SCEEEEETTTCCEEEEE------
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEe------
Confidence 46788888 6643 444444 5666777766 57777765443 36889999876543221
Q ss_pred CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee---ceeEE-EEEec
Q 004475 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFS-VSWCD 307 (751)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~---~~~~~-~~~sp 307 (751)
......+..++|+|+|+. ++..+ ..+.+.++++. ......+... ..... +.|+|
T Consensus 237 ------~~h~~~v~~v~~~p~~~~-l~s~s------------~D~~v~lwd~~---~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 237 ------ETHESDVNSVRYYPSGDA-FASGS------------DDATCRLYDLR---ADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp ------CCCSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEETT---TTEEEEEECCTTCCSCEEEEEECT
T ss_pred ------cCCCCCeEEEEEeCCCCE-EEEEe------------CCCeEEEEECC---CCcEEEEEcCCCcccceeEEEEeC
Confidence 112234668999999987 55543 23567888874 2221111111 12345 89999
Q ss_pred CCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 308 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 308 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
+|+.|+.... ...|.+.++.++ ............+.. ++|||||++|+..+.
T Consensus 295 ~g~~l~~g~~----d~~i~vwd~~~~--~~~~~l~~h~~~v~~------l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 295 SGRLLFAGYN----DYTINVWDVLKG--SRVSILFGHENRVST------LRVSPDGTAFCSGSW 346 (354)
T ss_dssp TSSEEEEEET----TSCEEEEETTTC--SEEEEECCCSSCEEE------EEECTTSSCEEEEET
T ss_pred CCCEEEEEEC----CCcEEEEECCCC--ceEEEEECCCCcEEE------EEECCCCCEEEEEcC
Confidence 9998877652 235666676554 222222222222333 889999999988873
No 296
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.49 E-value=6.9e-12 Score=132.57 Aligned_cols=238 Identities=16% Similarity=0.115 Sum_probs=141.8
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
+...+|||||++||... ....|.++++++++......+... .+..++|+|||+.|+..+.+
T Consensus 126 v~~v~~s~dg~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~d----- 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA----------EDRLIRIWDIENRKIVMILQGHEQ----DIYSLDYFPSGDKLVSGSGD----- 186 (393)
T ss_dssp EEEEEECTTSSEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETT-----
T ss_pred EEEEEECCCCCEEEEEc----------CCCeEEEEECCCCcEEEEEccCCC----CEEEEEEcCCCCEEEEecCC-----
Confidence 67889999999998853 346788889988876554433322 37789999999999877442
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCCceEEeeeeCC-CCceE
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSP-DQKYV 189 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~~~~~~~~~Sp-DG~~i 189 (751)
..|.++|+ +|+. ..+.....+..++|+| ||++|
T Consensus 187 --------------------------------------------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 187 --------------------------------------------RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp --------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred --------------------------------------------CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 46778888 6643 3333336778899999 89988
Q ss_pred EEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (751)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~ 269 (751)
+..+.+ ..+.+||..++........... ........+..++|+|||+. |+..+
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~-----~~~~h~~~v~~v~~~~~g~~-l~s~s-------- 275 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENE-----SGTGHKDSVYSVVFTRDGQS-VVSGS-------- 275 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC-----------CCCSSCEEEEEECTTSSE-EEEEE--------
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeeccccc-----CCCCCCCCEEEEEECCCCCE-EEEEe--------
Confidence 876543 3588999987653321111000 00112234678999999997 55543
Q ss_pred cccCcccceeeccCCCCC----------CCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcce
Q 004475 270 VEVSPRDIIYTQPAEPAE----------GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 338 (751)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~----------~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 338 (751)
..+.|.++++.... +.....+......+. +.|+|++++|+..+. ...|.+.+..++ ...
T Consensus 276 ----~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~----D~~v~iwd~~~~--~~~ 345 (393)
T 1erj_A 276 ----LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK----DRGVLFWDKKSG--NPL 345 (393)
T ss_dssp ----TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET----TSEEEEEETTTC--CEE
T ss_pred ----CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC----CCeEEEEECCCC--eEE
Confidence 23567777764110 000112223344456 899999998886552 246777777764 222
Q ss_pred eeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 339 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.........+......+...|+||++.|+..+
T Consensus 346 ~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 346 LMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp EEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred EEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 22222222222200001122456888887777
No 297
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.48 E-value=1.1e-12 Score=137.16 Aligned_cols=200 Identities=11% Similarity=0.054 Sum_probs=127.1
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
+...+|||||++||..+. .....|.++++++++......... .+..++|||||++|+..+.
T Consensus 136 ~~~v~fSpDg~~la~as~--------~~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~~l~s~s~------ 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASS--------KVPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGKVVAYITG------ 196 (365)
T ss_dssp EEEEEECTTSSCEEEEES--------CSSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSSEEEEECS------
T ss_pred EEEEEEcCCCCEEEEEEC--------CCCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCceEEeccc------
Confidence 456899999999998653 344789999999887655433322 3778999999999988743
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecC--CC-ceEEeeeeCCCCc
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG--TP-AVYTAVEPSPDQK 187 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt--~~-~~~~~~~~SpDG~ 187 (751)
..+.+++. +|+. ...+ .+ ..+..++|+|||+
T Consensus 197 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 197 --------------------------------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp --------------------------------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred --------------------------------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 13444444 6632 2222 22 5678999999999
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
.++..+.+.. ....++.|+........+.... +......+..++|||||+. |+..+
T Consensus 233 ~l~~~s~d~~---------~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~V~~~~~Spdg~~-lasgs------ 288 (365)
T 4h5i_A 233 VLIAASLKKG---------KGIVLTKISIKSGNTSVLRSKQ--------VTNRFKGITSMDVDMKGEL-AVLAS------ 288 (365)
T ss_dssp EEEEEEESSS---------CCEEEEEEEEETTEEEEEEEEE--------EESSCSCEEEEEECTTSCE-EEEEE------
T ss_pred EEEEEecCCc---------ceeEEeecccccceecceeeee--------ecCCCCCeEeEEECCCCCc-eEEEc------
Confidence 9988765532 1234667777654332111000 1111233568999999998 66654
Q ss_pred CccccCcccceeeccCCCCCCCC-ceEe-EeeceeEE-EEEecCCceEEEeeeecccceeEEEecC
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEK-PEIL-HKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCP 330 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~-~~~l-~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~ 330 (751)
..+.|.+++++ .+. ...+ ..+...+. ++|||||++|+..+. +..-+||.++.
T Consensus 289 ------~D~~V~iwd~~---~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~--D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 ------NDNSIALVKLK---DLSMSKIFKQAHSFAITEVTISPDSTYVASVSA--ANTIHIIKLPL 343 (365)
T ss_dssp ------TTSCEEEEETT---TTEEEEEETTSSSSCEEEEEECTTSCEEEEEET--TSEEEEEECCT
T ss_pred ------CCCEEEEEECC---CCcEEEEecCcccCCEEEEEECCCCCEEEEEeC--CCeEEEEEcCC
Confidence 23578889885 222 2222 23455677 999999999987663 33346666543
No 298
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.48 E-value=6.9e-14 Score=141.37 Aligned_cols=168 Identities=11% Similarity=0.105 Sum_probs=106.3
Q ss_pred hCCeEEEEcCCCCCCCCCCCC-CC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475 552 ARRFAVLAGPSIPIIGEGDKL-PN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 628 (751)
Q Consensus 552 ~~G~~v~~~~~~~~~g~g~~~-~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 628 (751)
.+||.|++ ++.+|+|.+. .. .....+..+|+.++++.+ ..+++.++||||||.+|+.+|.++|+++++
T Consensus 67 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILT---IDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEE---ECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEE---EcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 47999999 5666777765 22 223455666666665544 235899999999999999999999999999
Q ss_pred EEEccCCCCCCC----Cc---------cCcccc----------cccchh--------------hHHHHHhcCc-------
Q 004475 629 GIARSGSYNKTL----TP---------FGFQTE----------FRTLWE--------------ATNVYIEMSP------- 664 (751)
Q Consensus 629 ~v~~~~~~d~~~----~~---------~~~~~~----------~~~~~~--------------~~~~~~~~~~------- 664 (751)
+|+++|...... .. ...... ....|- ....+....+
T Consensus 138 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (292)
T 3l80_A 138 FIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIR 217 (292)
T ss_dssp EEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSS
T ss_pred EEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchh
Confidence 999994321000 00 000000 000000 0001111121
Q ss_pred --------ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHH
Q 004475 665 --------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 736 (751)
Q Consensus 665 --------~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 736 (751)
...+.+ ++|+|+++|++|..++ .. + .+. +.-...+ +++++++|.+. .+..+.+.+.+.+||
T Consensus 218 ~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~~----~~~~~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 218 LALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EYL----NKHTQTK-LILCGQHHYLH-WSETNSILEKVEQLL 286 (292)
T ss_dssp CCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TTC----CCCTTCE-EEECCSSSCHH-HHCHHHHHHHHHHHH
T ss_pred hhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HHh----ccCCCce-eeeCCCCCcch-hhCHHHHHHHHHHHH
Confidence 123345 8999999999999887 55 3 333 2223346 89999999875 466788899999999
Q ss_pred HHH
Q 004475 737 QKY 739 (751)
Q Consensus 737 ~~~ 739 (751)
+++
T Consensus 287 ~~~ 289 (292)
T 3l80_A 287 SNH 289 (292)
T ss_dssp HTC
T ss_pred Hhc
Confidence 854
No 299
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.48 E-value=3.3e-12 Score=128.17 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=130.3
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCC--------CC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------IP 564 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~--------~~ 564 (751)
.+.+.+++|.+ ++|.|+||.+||+. . ...+||+++..++ .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 46999999976 46799999999741 0 0357999988433 11
Q ss_pred CCCCCCC------CCCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475 565 IIGEGDK------LPNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 634 (751)
Q Consensus 565 ~~g~g~~------~~~~~~~~~~~~d~~~~v~~l~~----~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 634 (751)
.+|+|.- ...........-++.++++||.+ ++.||++||+++|||+||..|+++++.. ++|+++|+.++
T Consensus 173 srG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~s 251 (433)
T 4g4g_A 173 SRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQES 251 (433)
T ss_dssp GTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESC
T ss_pred cCCccccccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecC
Confidence 2232210 00111123345688999999999 8899999999999999999999999999 68999999886
Q ss_pred CCCCCCC-c-------cCcc--c----ccccchhhHHHHHhcC------ccccc---CC-CCCCEEEEEcCCCCCCCCCh
Q 004475 635 SYNKTLT-P-------FGFQ--T----EFRTLWEATNVYIEMS------PITHA---NK-IKKPILIIHGEVDDKVGLFP 690 (751)
Q Consensus 635 ~~d~~~~-~-------~~~~--~----~~~~~~~~~~~~~~~~------~~~~~---~~-~~~P~li~~G~~D~~vp~~~ 690 (751)
..+-... . .+.. . .....|-.+ .+..+. |+.+. .- ...|+|++.| +|...+ +
T Consensus 252 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~-~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~--p 327 (433)
T 4g4g_A 252 GAGGAACWRISDQQKAAGANIQTAAQIITENPWFSR-NFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG--P 327 (433)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCT-TTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--H
T ss_pred CCCchhhhhhchhhcccCcchhhhhcccCCccccch-hhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--c
Confidence 5331100 0 0000 0 000122111 111111 11110 00 1478999999 887776 6
Q ss_pred HHHHHHHHHH----H--hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCCCCCCC
Q 004475 691 MQAERFFDAL----K--GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGK 748 (751)
Q Consensus 691 ~~~~~~~~~l----~--~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~ 748 (751)
......+.++ + ....++.+.+.++.+|... .. .....+.+||+++|+....+.+
T Consensus 328 ~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~f-p~---~~r~~~~~F~~k~Lkg~~~~t~ 387 (433)
T 4g4g_A 328 VSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQF-PS---SQNQDLNSYINYFLLGQGSPSG 387 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCC-CG---GGHHHHHHHHHHHTTCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccC-CH---HHHHHHHHHHHHHhCCCCCCCc
Confidence 6544333332 1 2334677777666667542 22 2346788999999987655443
No 300
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.47 E-value=3.9e-14 Score=142.27 Aligned_cols=193 Identities=13% Similarity=0.011 Sum_probs=111.6
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 589 (751)
.|.||++||.+. ....| ..+...|.+ ||.|++ ++.+|+|.+... .....+..+++.+++
T Consensus 51 ~~~lvllHG~~~-----------~~~~~----~~l~~~L~~-~~~v~~---~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 111 (280)
T 3qmv_A 51 PLRLVCFPYAGG-----------TVSAF----RGWQERLGD-EVAVVP---VQLPGRGLRLRERPYDTMEPLAEAVADAL 111 (280)
T ss_dssp SEEEEEECCTTC-----------CGGGG----TTHHHHHCT-TEEEEE---CCCTTSGGGTTSCCCCSHHHHHHHHHHHH
T ss_pred CceEEEECCCCC-----------ChHHH----HHHHHhcCC-CceEEE---EeCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 488999999641 11222 133445554 999999 566677765332 223455566665555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee----EEEEccCCCCCCCCccCccccc----------------
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC----CGIARSGSYNKTLTPFGFQTEF---------------- 649 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~----~~v~~~~~~d~~~~~~~~~~~~---------------- 649 (751)
+.+. ...++.|+||||||.+|+.+|.++|+++. .+++..+...............
T Consensus 112 ~~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (280)
T 3qmv_A 112 EEHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDD 186 (280)
T ss_dssp HHTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC-
T ss_pred HHhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCCh
Confidence 5442 23689999999999999999999887665 5555443211000000000000
Q ss_pred ---------ccch----hhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004475 650 ---------RTLW----EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 716 (751)
Q Consensus 650 ---------~~~~----~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 716 (751)
.... ........+. ...+..+++|+|+++|++|..+| ...+..+.+.+ ...++++++++ +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~g-g 259 (280)
T 3qmv_A 187 ADTLGAAYFDRRLPVLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIAT--PEMVEAWRPYT---TGSFLRRHLPG-N 259 (280)
T ss_dssp --------CCTTHHHHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSC--HHHHHTTGGGB---SSCEEEEEEEE-E
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcC--hHHHHHHHHhc---CCceEEEEecC-C
Confidence 0000 0000111111 11246789999999999999998 77766555433 23467888886 8
Q ss_pred CcCCc-cccHHHHHHHHHHH
Q 004475 717 HVYAA-RENVMHVIWETDRW 735 (751)
Q Consensus 717 H~~~~-~~~~~~~~~~~~~f 735 (751)
|.... .+....+.+.+.+|
T Consensus 260 H~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 260 HFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp TTGGGSSHHHHHHHHHHHTT
T ss_pred CeEEcCchhHHHHHHHHHhh
Confidence 88753 24455566666555
No 301
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.47 E-value=7.9e-13 Score=132.18 Aligned_cols=198 Identities=15% Similarity=0.054 Sum_probs=120.4
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 589 (751)
.|.||++||.+. ....|. .+... ++.+|.|++ +|.+|+|.+... ........+|+.+++
T Consensus 27 ~p~vvllHG~~~--------------~~~~w~-~~~~~-L~~~~rvia---~DlrGhG~S~~~~~~~~~~~~a~dl~~ll 87 (276)
T 2wj6_A 27 GPAILLLPGWCH--------------DHRVYK-YLIQE-LDADFRVIV---PNWRGHGLSPSEVPDFGYQEQVKDALEIL 87 (276)
T ss_dssp SCEEEEECCTTC--------------CGGGGH-HHHHH-HTTTSCEEE---ECCTTCSSSCCCCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCC--------------cHHHHH-HHHHH-HhcCCEEEE---eCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 378999999541 111111 22333 446799999 677788887543 223567788888888
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEccCCCCCCCCc-----------cCccc---ccccchh
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLTP-----------FGFQT---EFRTLWE 654 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~d~~~~~-----------~~~~~---~~~~~~~ 654 (751)
+.+ +.+++.++||||||.+|+.+|.++ |++++++|++++........ ..+.. .....|.
T Consensus 88 ~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 2wj6_A 88 DQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWL 161 (276)
T ss_dssp HHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHH
T ss_pred HHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHHhh
Confidence 776 235899999999999999999999 99999999987642100000 00000 0000000
Q ss_pred ----h---------------HHH-----------HHh-cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhC
Q 004475 655 ----A---------------TNV-----------YIE-MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 703 (751)
Q Consensus 655 ----~---------------~~~-----------~~~-~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~ 703 (751)
. ... +.. ..+...+.++++|+++++|..|...+........+. +.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~----~~ 237 (276)
T 2wj6_A 162 DGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFA----EQ 237 (276)
T ss_dssp TTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHH----HH
T ss_pred cccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHH----hh
Confidence 0 000 000 011234567889999988754433220011222332 22
Q ss_pred CCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 704 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 704 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
-...+++++|++||... .+..+.+...+.+||.+.
T Consensus 238 ~p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 238 HPWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp CTTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 24579999999999865 566888999999999764
No 302
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.47 E-value=4.7e-13 Score=140.76 Aligned_cols=230 Identities=11% Similarity=0.062 Sum_probs=132.7
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||++||... ....|.++++.+++.+.+.....+ ...+..++|+|||++|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d---- 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT----------ATNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQD---- 76 (377)
T ss_dssp CCSCCEECSSSSEEECCC----------SSSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETT----
T ss_pred cEEEEEECCCCCEEEEec----------CCCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCC----
Confidence 578899999999998842 335666667667632332222221 1147789999999999887542
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC----ceecCCC-ceEEeeeeCCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFGTP-AVYTAVEPSPD 185 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~----~~~lt~~-~~~~~~~~SpD 185 (751)
..|.++++ +++ ...+..+ ..+..++|+||
T Consensus 77 ---------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 77 ---------------------------------------------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp ---------------------------------------------SSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred ---------------------------------------------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 35677777 444 3334444 77889999999
Q ss_pred CceEEEEEecCCcccccccCCCceeEEEEeCCCce----eeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
|++|+....+ ..+.+|++++++ .+.+.. .....+..++|+|||+. |+..+
T Consensus 112 ~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~-l~~~~ 165 (377)
T 3dwl_C 112 EDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKR------------PLRSTILSLDWHPNNVL-LAAGC 165 (377)
T ss_dssp SSCCEEEESS-------------SCEEECCC-----CCCCEEECS------------SCCSCEEEEEECTTSSE-EEEEE
T ss_pred CCEEEEEecC-------------CeEEEEEECCcccceeeeEeec------------ccCCCeEEEEEcCCCCE-EEEEe
Confidence 9999887543 358899988764 222221 02234668999999987 55543
Q ss_pred eccCCCCccccCcccceeeccCCCCC--CC----------C-ceEeE--eeceeEE-EEEecCCceEEEeeeecccceeE
Q 004475 262 AQDRGDANVEVSPRDIIYTQPAEPAE--GE----------K-PEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRT 325 (751)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~--~~----------~-~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l 325 (751)
..+.|.++++.... .. . ...+. .....+. +.|+|||+.|+.... ...|
T Consensus 166 ------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----d~~i 229 (377)
T 3dwl_C 166 ------------ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH----DSSV 229 (377)
T ss_dssp ------------SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET----TTEE
T ss_pred ------------CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC----CCcE
Confidence 22456777653100 00 0 01111 3344566 999999999887662 2355
Q ss_pred EEecCCCCCCcc--eeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 326 WLVCPGSKDVAP--RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 326 ~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.+.++.++.... ..........+.. ++|+|||+.|+...
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQLPLRS------LLWANESAIVAAGY 270 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSSSCEEE------EEEEETTEEEEEES
T ss_pred EEEECCCCCCcceeeEeecCCCCceEE------EEEcCCCCEEEEEc
Confidence 566665541111 1111121122222 78999999887655
No 303
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.47 E-value=6.4e-12 Score=133.35 Aligned_cols=292 Identities=11% Similarity=0.015 Sum_probs=167.1
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--eeccCCCCccccceeeeeEEec-CCcEEEEeecCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRR 110 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~ 110 (751)
...+++|+...+++.. ...+.|.++++..... ..+.....+ ...+..++|+| +++.|+..+.+
T Consensus 38 ~~~~~~~~~~~~~~~~---------~~~g~i~v~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~s~d--- 103 (402)
T 2aq5_A 38 GFCAVNPKFMALICEA---------SGGGAFLVLPLGKTGRVDKNVPLVCGH--TAPVLDIAWCPHNDNVIASGSED--- 103 (402)
T ss_dssp CSEEECSSEEEEEBCC---------SSSCCEEEEETTCCEECCTTCCCBCCC--SSCEEEEEECTTCTTEEEEEETT---
T ss_pred CcEEECCCeEEEEEEE---------cCCCEEEEEECccCCCCCCCCceEecC--CCCEEEEEeCCCCCCEEEEEeCC---
Confidence 3466777655544422 4457888888754321 111111111 12478899999 88888877442
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC--------ceecCCC-ceEEee
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--------AKDFGTP-AVYTAV 180 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~--------~~~lt~~-~~~~~~ 180 (751)
..|.++++ +++ ...+..+ ..+..+
T Consensus 104 ----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 137 (402)
T 2aq5_A 104 ----------------------------------------------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIV 137 (402)
T ss_dssp ----------------------------------------------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEE
T ss_pred ----------------------------------------------CeEEEEEccCCCCccccCCceEEecCCCCeEEEE
Confidence 35677777 441 2344444 678899
Q ss_pred eeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEE
Q 004475 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (751)
Q Consensus 181 ~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~ 260 (751)
+|+|||+.++++... ...+.+||+.+++....... ......+..++|+|||+. |+..
T Consensus 138 ~~~p~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~-l~~~ 194 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGC------------DNVILVWDVGTGAAVLTLGP----------DVHPDTIYSVDWSRDGAL-ICTS 194 (402)
T ss_dssp EECSSBTTEEEEEET------------TSCEEEEETTTTEEEEEECT----------TTCCSCEEEEEECTTSSC-EEEE
T ss_pred EECcCCCCEEEEEcC------------CCEEEEEECCCCCccEEEec----------CCCCCceEEEEECCCCCE-EEEE
Confidence 999999644444332 34689999987654432110 111233568999999998 5654
Q ss_pred EeccCCCCccccCcccceeeccCCCCCCCCceEe-Eeecee-EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcc
Q 004475 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-HKLDLR-FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 337 (751)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-~~~~~~-~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 337 (751)
. ..+.|+++++.. +.....+ ...... .. +.|+|||+.|+.+... .....|.+.++.+. ..+
T Consensus 195 ~------------~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~-~~d~~i~iwd~~~~-~~~ 258 (402)
T 2aq5_A 195 C------------RDKRVRVIEPRK--GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR-MSERQVALWDTKHL-EEP 258 (402)
T ss_dssp E------------TTSEEEEEETTT--TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT-TCCEEEEEEETTBC-SSC
T ss_pred e------------cCCcEEEEeCCC--CceeeeeccCCCCCcceEEEEcCCCcEEEEeccC-CCCceEEEEcCccc-cCC
Confidence 4 235788998851 2222222 122222 45 8999999988775311 23457778888764 222
Q ss_pred eeeee-cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc--eeEEeeccc
Q 004475 338 RVLFD-RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNR 414 (751)
Q Consensus 338 ~~l~~-~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~ 414 (751)
..+.. .....+.. ++|+|||+.|++... ....|.+||+.+++ ...+.....
T Consensus 259 ~~~~~~~~~~~v~~------~~~s~~~~~l~~~g~--------------------~dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 259 LSLQELDTSSGVLL------PFFDPDTNIVYLCGK--------------------GDSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp SEEEECCCCSSCEE------EEEETTTTEEEEEET--------------------TCSCEEEEEECSSTTCEEEEEEECC
T ss_pred ceEEeccCCCceeE------EEEcCCCCEEEEEEc--------------------CCCeEEEEEecCCCcceEeeccccc
Confidence 22222 11111222 789999999877661 12368889998876 333322211
Q ss_pred hhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475 415 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 466 (751)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l 466 (751)
......++|+||+..++. . -..+.++++.+++.+.+
T Consensus 313 ----------~~~v~~~~~sp~~~~~~s---~---~~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 313 ----------KESQRGMGYMPKRGLEVN---K---CEIARFYKLHERKCEPI 348 (402)
T ss_dssp ----------SSCCSEEEECCGGGSCGG---G---TEEEEEEEEETTEEEEE
T ss_pred ----------CCcccceEEeccccccee---c---ceeEEEEEcCCCcEEEE
Confidence 111233689999987552 1 12466666666655443
No 304
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.47 E-value=4e-11 Score=123.70 Aligned_cols=311 Identities=9% Similarity=0.024 Sum_probs=166.1
Q ss_pred eeEEeecCCCCCCCCcccccCCCC-cccccceeecCCC-CeEEEEEeecccccccCCceeEEEEEcCCCCe------eec
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------KPL 77 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG-~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~------~~l 77 (751)
++|++.... -+.+....|.+ ...+...+||||+ +.||..+ ....|.++++..++. +.+
T Consensus 17 ~~~~~~~~~----~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s----------~D~~i~vWd~~~~~~~~~~~~~~l 82 (340)
T 4aow_A 17 NLYFQSMMT----EQMTLRGTLKGHNGWVTQIATTPQFPDMILSAS----------RDKTIIMWKLTRDETNYGIPQRAL 82 (340)
T ss_dssp -------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEE----------TTSCEEEEEECCSSSCSEEEEEEE
T ss_pred cEEEEEccC----CceEEEEEECCccCCEEEEEEeCCCCCEEEEEc----------CCCeEEEEECCCCCcccceeeEEE
Confidence 566666655 33222111222 2368899999995 5666543 224566666655431 112
Q ss_pred cCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheee
Q 004475 78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (751)
Q Consensus 78 t~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (751)
..... .+..++|+|||+.|+..+.+ .
T Consensus 83 ~~h~~-----~V~~~~~s~dg~~l~s~~~d-------------------------------------------------~ 108 (340)
T 4aow_A 83 RGHSH-----FVSDVVISSDGQFALSGSWD-------------------------------------------------G 108 (340)
T ss_dssp CCCSS-----CEEEEEECTTSSEEEEEETT-------------------------------------------------S
T ss_pred eCCCC-----CEEEEEECCCCCEEEEEccc-------------------------------------------------c
Confidence 11111 47789999999999877442 3
Q ss_pred EEEEEcC-CC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 158 QLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 158 ~l~~~~~-~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
.|..++. .+ ........ .......++|+++.|+....+ ..+.+|+..+.........
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~------- 168 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDE------- 168 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSS-------
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-------------CeEEEEEeCCCceEEEEec-------
Confidence 5666666 33 22222222 566678899999998876543 3577888876544322111
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALV 313 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~ 313 (751)
.....+..+.|++++...+++... ..+.|.++++.. +.....+......+. +.|+|||+.|+
T Consensus 169 ----~~~~~v~~~~~~~~~~~~~~~s~~-----------~d~~i~i~d~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~ 231 (340)
T 4aow_A 169 ----SHSEWVSCVRFSPNSSNPIIVSCG-----------WDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSPDGSLCA 231 (340)
T ss_dssp ----SCSSCEEEEEECSCSSSCEEEEEE-----------TTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ----cccCcccceEEccCCCCcEEEEEc-----------CCCEEEEEECCC--CceeeEecCCCCcEEEEEECCCCCEEE
Confidence 112234577899998764444321 224677788741 222233334455677 99999999887
Q ss_pred EeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCC
Q 004475 314 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNI 393 (751)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (751)
.+.. ...|.+.++.+. ......... ..+.. +.|+|++..|+... +
T Consensus 232 s~s~----Dg~i~iwd~~~~--~~~~~~~~~-~~v~~------~~~~~~~~~~~~~~-d--------------------- 276 (340)
T 4aow_A 232 SGGK----DGQAMLWDLNEG--KHLYTLDGG-DIINA------LCFSPNRYWLCAAT-G--------------------- 276 (340)
T ss_dssp EEET----TCEEEEEETTTT--EEEEEEECS-SCEEE------EEECSSSSEEEEEE-T---------------------
T ss_pred EEeC----CCeEEEEEeccC--ceeeeecCC-ceEEe------eecCCCCceeeccC-C---------------------
Confidence 6552 245667777664 222222211 11111 67999987654433 1
Q ss_pred ceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCc
Q 004475 394 PFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 462 (751)
Q Consensus 394 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~ 462 (751)
..|.+||+.++........... .............++|||||+.|+... .. +.|+++++.+|+
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~sgs-~D---g~v~iW~~~tGt 339 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVI--STSSKAEPPQCTSLAWSADGQTLFAGY-TD---NLVRVWQVTIGT 339 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC---------CCCCCEEEEEECTTSSEEEEEE-TT---SCEEEEEEEC--
T ss_pred CEEEEEECCCCeEEEeccccce--eeeccCCCCCEEEEEECCCCCEEEEEe-CC---CEEEEEeCCCcC
Confidence 2688899987654333222110 000000011112368999999776543 22 458888888774
No 305
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.47 E-value=6e-12 Score=133.57 Aligned_cols=253 Identities=12% Similarity=-0.000 Sum_probs=149.3
Q ss_pred cceeEEeecCCCCCCCCc-ccccCCC-CcccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCe------
Q 004475 4 FTGIGIHRLLPDDSLGPE-KEVHGYP-DGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA------ 74 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~-~~l~~~~-~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~------ 74 (751)
...|.+|++.. . |+. ..+..+. ....+...+||| ||+.||..+ ..+.|.++++.+++.
T Consensus 56 ~g~i~v~~~~~--~-~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~dg~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 56 GGAFLVLPLGK--T-GRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS----------EDCTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp SCCEEEEETTC--C-EECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE----------TTSEEEEEECCTTCCSSCBCS
T ss_pred CCEEEEEECcc--C-CCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe----------CCCeEEEEEccCCCCccccCC
Confidence 34788999865 1 221 1222122 233688999999 888888753 336777788877632
Q ss_pred --eeccCCCCccccceeeeeEEecCCc-EEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhh
Q 004475 75 --KPLFESPDICLNAVFGSFVWVNNST-LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (751)
Q Consensus 75 --~~lt~~~~~~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (751)
..+..... .+..++|+|+|+ .|+..+.+
T Consensus 123 ~~~~~~~h~~-----~v~~~~~~p~~~~~l~s~~~d-------------------------------------------- 153 (402)
T 2aq5_A 123 PVITLEGHTK-----RVGIVAWHPTAQNVLLSAGCD-------------------------------------------- 153 (402)
T ss_dssp CSEEEECCSS-----CEEEEEECSSBTTEEEEEETT--------------------------------------------
T ss_pred ceEEecCCCC-----eEEEEEECcCCCCEEEEEcCC--------------------------------------------
Confidence 22221121 467899999995 55554322
Q ss_pred hhheeeEEEEEcC-CCC-ceec--CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeec-
Q 004475 152 DYYTTAQLVLGSL-DGT-AKDF--GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC- 225 (751)
Q Consensus 152 ~~~~~~~l~~~~~-~G~-~~~l--t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~- 225 (751)
..|.++|+ +++ ...+ ..+ ..+..++|+|||++|+....+ ..|.+||+.+++.....
T Consensus 154 -----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~ 215 (402)
T 2aq5_A 154 -----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKD 215 (402)
T ss_dssp -----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEE
T ss_pred -----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeec
Confidence 46778888 663 3444 334 778899999999999887543 36899999876543321
Q ss_pred cCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-
Q 004475 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS- 302 (751)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~- 302 (751)
.... ...+..+.|+|||+. ++.... ....+.|.++++.. ...+..+. .....+.
T Consensus 216 ~~~~-----------~~~~~~~~~~~~~~~-l~~g~~---------~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 216 RPHE-----------GTRPVHAVFVSEGKI-LTTGFS---------RMSERQVALWDTKH--LEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp CSSC-----------SSSCCEEEECSTTEE-EEEEEC---------TTCCEEEEEEETTB--CSSCSEEEECCCCSSCEE
T ss_pred cCCC-----------CCcceEEEEcCCCcE-EEEecc---------CCCCceEEEEcCcc--ccCCceEEeccCCCceeE
Confidence 1110 012457899999986 444310 01235888888852 12222222 2334455
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-cccccCCCCCCCeeeCCCCCEEEE
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIA 368 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spDG~~l~~ 368 (751)
+.|+|||+.|+.+.. ....|.++++.++......+.... ...+.. ++|+|||..++.
T Consensus 273 ~~~s~~~~~l~~~g~---~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~------~~~sp~~~~~~s 330 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGK---GDSSIRYFEITSEAPFLHYLSMFSSKESQRG------MGYMPKRGLEVN 330 (402)
T ss_dssp EEEETTTTEEEEEET---TCSCEEEEEECSSTTCEEEEEEECCSSCCSE------EEECCGGGSCGG
T ss_pred EEEcCCCCEEEEEEc---CCCeEEEEEecCCCcceEeecccccCCcccc------eEEeccccccee
Confidence 899999999876552 123566666666411123333221 122222 889999987653
No 306
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.46 E-value=1.1e-11 Score=151.76 Aligned_cols=280 Identities=10% Similarity=0.103 Sum_probs=173.7
Q ss_pred ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
..+...+|||||++||..+ ..+.|.++++.+++.......... .+..++|||||++|+..+.+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~----------~d~~i~vw~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~~~d--- 678 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCG----------ADKTLQVFKAETGEKLLDIKAHED----EVLCCAFSSDDSYIATCSAD--- 678 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETT---
T ss_pred ccEEEEEECCCCCEEEEEe----------CCCeEEEEECCCCCEEEEeccCCC----CEEEEEEecCCCEEEEEeCC---
Confidence 3678899999999998863 336788889988875443332221 47889999999999887432
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCc
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~ 187 (751)
..|.++|+ +|+ ...+..+ ..+..++|+|+++
T Consensus 679 ----------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 712 (1249)
T 3sfz_A 679 ----------------------------------------------KKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSN 712 (1249)
T ss_dssp ----------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred ----------------------------------------------CeEEEEECCCCceEEEEcCCCCcEEEEEEecCCC
Confidence 47888888 664 3445445 7788999999765
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
..++.+... ...+.+||+.+++...... .....+..++|+|||+. ++..+
T Consensus 713 ~~~l~sg~~-----------d~~v~vwd~~~~~~~~~~~------------~h~~~v~~~~~sp~~~~-l~s~s------ 762 (1249)
T 3sfz_A 713 HLLLATGSN-----------DFFLKLWDLNQKECRNTMF------------GHTNSVNHCRFSPDDEL-LASCS------ 762 (1249)
T ss_dssp CCEEEEEET-----------TSCEEEEETTSSSEEEEEC------------CCSSCEEEEEECSSTTE-EEEEE------
T ss_pred ceEEEEEeC-----------CCeEEEEECCCcchhheec------------CCCCCEEEEEEecCCCE-EEEEE------
Confidence 433332221 3468899998765432211 12233568999999997 55543
Q ss_pred CccccCcccceeeccCCCCCCCCceEeE-------------eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILH-------------KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~-------------~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
..+.|.++++.. +.....+. .....+. ++|+|||+.|+... ...+.+++..++
T Consensus 763 ------~dg~v~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-----~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 763 ------ADGTLRLWDVRS--ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-----KNKVLLFDIHTS 829 (1249)
T ss_dssp ------SSSEEEEEEGGG--TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-----TTEEEEEETTTC
T ss_pred ------CCCeEEEEeCCC--CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-----CCcEEEEEecCC
Confidence 234677777641 11111111 0111334 78999999988766 236777787774
Q ss_pred CCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475 334 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 413 (751)
Q Consensus 334 ~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 413 (751)
.....+.......+.. ++|+|+|+.++.... ...+.+||+.++.........
T Consensus 830 -~~~~~~~~~~~~~v~~------~~~sp~~~~l~~~~~---------------------dg~v~vwd~~~~~~~~~~~~h 881 (1249)
T 3sfz_A 830 -GLLAEIHTGHHSTIQY------CDFSPYDHLAVIALS---------------------QYCVELWNIDSRLKVADCRGH 881 (1249)
T ss_dssp -CEEEEEECSSSSCCCE------EEECSSTTEEEEECS---------------------SSCEEEEETTTTEEEEEECCC
T ss_pred -CceeEEcCCCCCceEE------EEEcCCCCEEEEEeC---------------------CCeEEEEEcCCCceeeecCCC
Confidence 2222222222222222 789999999888772 236889999887654443322
Q ss_pred chhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 414 REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
.. .+. .++|+|||+.++.... -+.+.++++.
T Consensus 882 ~~----~v~-------~v~~spdg~~l~s~s~----dg~v~vw~~~ 912 (1249)
T 3sfz_A 882 LS----WVH-------GVMFSPDGSSFLTASD----DQTIRVWETK 912 (1249)
T ss_dssp SS----CEE-------EEEECTTSSEEEEEET----TSCEEEEEHH
T ss_pred cc----ceE-------EEEECCCCCEEEEEeC----CCeEEEEEcc
Confidence 11 122 2589999998775532 2346666654
No 307
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.46 E-value=5.2e-12 Score=133.67 Aligned_cols=229 Identities=12% Similarity=0.012 Sum_probs=136.0
Q ss_pred cceeEEeecCCCCCCCC-------cccccCCCCcccccceeecCC----C---CeEEEEEeecccccccCCceeEEEEEc
Q 004475 4 FTGIGIHRLLPDDSLGP-------EKEVHGYPDGAKINFVSWSPD----G---KRIAFSVRVDEEDNVSSCKLRVWIADA 69 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~-------~~~l~~~~~~~~~~~p~~SPD----G---~~iaf~~~~~~~~~~~~~~~~l~i~~~ 69 (751)
...|++|++.+ ++ ...+. .....+...+|+|| | +.|+... ....|+++++
T Consensus 35 dg~i~iw~~~~----~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~g~~~~~l~s~~----------~dg~i~iw~~ 98 (397)
T 1sq9_A 35 DGYLKVWDNKL----LDNENPKDKSYSHF--VHKSGLHHVDVLQAIERDAFELCLVATTS----------FSGDLLFYRI 98 (397)
T ss_dssp TSEEEEEESBC----CTTCCGGGGEEEEE--CCTTCEEEEEEEEEEETTTEEEEEEEEEE----------TTSCEEEEEE
T ss_pred CCEEEEEECCC----cccccCCCcceEEe--cCCCcEEEEEEecccccCCccccEEEEEc----------CCCCEEEEEc
Confidence 45799999988 66 33333 22335889999999 9 8888863 2356777777
Q ss_pred CCCC------eeeccCCCCccccceeeeeEEe----cCCcE-EEEeecCCCCCCCCCCCCCCCCceeeccccccccchhh
Q 004475 70 ETGE------AKPLFESPDICLNAVFGSFVWV----NNSTL-LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (751)
Q Consensus 70 ~~g~------~~~lt~~~~~~~~~~~~~~~ws----pDg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (751)
.+++ .+.+...........+..++|+ |+|+. |+..+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------------------------------- 147 (397)
T 1sq9_A 99 TREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------------------------------- 147 (397)
T ss_dssp EECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------------------------
T ss_pred cCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------------------------
Confidence 7776 4444333210001247889999 99999 7776432
Q ss_pred hhccCCccchhhhhhheeeEEEEEcC-C------C-Cce-----ec-------CCC-ceEEeeeeCCCCceEEEEEecCC
Q 004475 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D------G-TAK-----DF-------GTP-AVYTAVEPSPDQKYVLITSMHRP 197 (751)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~------G-~~~-----~l-------t~~-~~~~~~~~SpDG~~i~~~~~~~~ 197 (751)
..|.++++ + + ... .+ ..+ ..+..++|+||| .|+....
T Consensus 148 ------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--- 205 (397)
T 1sq9_A 148 ------------------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN--- 205 (397)
T ss_dssp ------------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT---
T ss_pred ------------------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC---
Confidence 34555555 4 3 222 33 122 567789999999 6665432
Q ss_pred cccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccc
Q 004475 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (751)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~ 277 (751)
...+.+||+.+++........... ......+..+.|+|||+. |+... .+ ...+.
T Consensus 206 ----------dg~i~i~d~~~~~~~~~~~~~~~h------~~~~~~i~~i~~~~~~~~-l~~~~-~d--------~~~g~ 259 (397)
T 1sq9_A 206 ----------NGTVQISELSTLRPLYNFESQHSM------INNSNSIRSVKFSPQGSL-LAIAH-DS--------NSFGC 259 (397)
T ss_dssp ----------TSEEEEEETTTTEEEEEEECCC---------CCCCCEEEEEECSSTTE-EEEEE-EE--------TTEEE
T ss_pred ----------CCcEEEEECCCCceeEEEeccccc------cccCCccceEEECCCCCE-EEEEe-cC--------CCCce
Confidence 346889999866543322210000 000234668999999997 55443 10 01157
Q ss_pred eeeccCCCCCCCCceEeEe-------------eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 278 IYTQPAEPAEGEKPEILHK-------------LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 278 l~~~~~~~~~~~~~~~l~~-------------~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
|+++++.. +.....+.. ....+. +.|+|||+.|+.... ...|.++++.++
T Consensus 260 i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~ 323 (397)
T 1sq9_A 260 ITLYETEF--GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW----DGKLRFWDVKTK 323 (397)
T ss_dssp EEEEETTT--CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET----TSEEEEEETTTT
T ss_pred EEEEECCC--CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC----CCeEEEEEcCCC
Confidence 88888751 222333333 455667 999999998887652 346777787764
No 308
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.46 E-value=3.9e-11 Score=127.29 Aligned_cols=311 Identities=12% Similarity=0.097 Sum_probs=173.4
Q ss_pred eEEeecCCCCCCCCcccccCCCCcccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC---
Q 004475 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--- 82 (751)
Q Consensus 7 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~--- 82 (751)
+.++++.. ++.+.+.. .....+...+||| ||++||... ..+.|.++++.+++.........
T Consensus 25 ~~v~~~~~----~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~ 89 (408)
T 4a11_B 25 RRVLGLEL----NKDRDVER-IHGGGINTLDIEPVEGRYMLSGG----------SDGVIVLYDLENSSRQSYYTCKAVCS 89 (408)
T ss_dssp HHHHTEEE----CTTEEECC-CCSSCEEEEEECTTTCCEEEEEE----------TTSCEEEEECCCCSSSSCEEECEEEE
T ss_pred ceeecccc----Ccceeeee-ccCCcEEEEEEecCCCCEEEEEc----------CCCeEEEEECCCCcccceEecccccc
Confidence 44555555 55555542 2334688999999 999998863 33678888888776444322000
Q ss_pred ------ccccceeeeeEEec-CCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhe
Q 004475 83 ------ICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (751)
Q Consensus 83 ------~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (751)
......+..++|+| +++.|+..+.+
T Consensus 90 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------------------------------------------------ 121 (408)
T 4a11_B 90 IGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------------------------------------------------ 121 (408)
T ss_dssp ECTTCTTCCSSCEEEEEECTTCTTCEEEEETT------------------------------------------------
T ss_pred ccccccccCCCcEEEEEEccCCCcEEEEEeCC------------------------------------------------
Confidence 00112477899999 66677766332
Q ss_pred eeEEEEEcC-CCCce-ecCCCceEEeeeeCCCC---ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475 156 TAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQ---KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (751)
Q Consensus 156 ~~~l~~~~~-~G~~~-~lt~~~~~~~~~~SpDG---~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 230 (751)
..|.++++ +++.. .+.....+..+.|+|++ +.|+....+ ..+.+||+.+++.....
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~----- 182 (408)
T 4a11_B 122 -KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHIL----- 182 (408)
T ss_dssp -SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEE-----
T ss_pred -CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeee-----
Confidence 47888888 55433 33323566677777754 466665433 36889999866433221
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe---------------E
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL---------------H 295 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---------------~ 295 (751)
......+..++|+|+++++++... ..+.|.++++... ......+ .
T Consensus 183 -------~~~~~~v~~~~~~~~~~~ll~~~~------------~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 183 -------QGHRQEILAVSWSPRYDYILATAS------------ADSRVKLWDVRRA-SGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp -------CCCCSCEEEEEECSSCTTEEEEEE------------TTSCEEEEETTCS-SCCSEECCTTTTCSCCCTTTSSC
T ss_pred -------cCCCCcEEEEEECCCCCcEEEEEc------------CCCcEEEEECCCC-Ccccccccccccccceeeccccc
Confidence 112234668999999998333332 2245666666311 1111111 2
Q ss_pred eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeee-CCCCCEEEEeeeec
Q 004475 296 KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR-TSTGTNVIAKIKKE 373 (751)
Q Consensus 296 ~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-spDG~~l~~~~~~~ 373 (751)
.....+. +.|+|||+.|+.... ...|.+.++.++. ............ .. ......+ ...+..+++...+
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~-~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~- 313 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVGT----DNRMRLWNSSNGE-NTLVNYGKVCNN-SK--KGLKFTVSCGCSSEFVFVPYG- 313 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCC-BCCCCCCCCCCC-CS--SCCCCEECCSSSSCEEEEEET-
T ss_pred cccCceeEEEEcCCCCEEEEecC----CCeEEEEECCCCc-cceecccccccc-cc--ccceeEEecCCCceEEEEecC-
Confidence 3445566 999999999887652 2356677776641 111111110000 00 0000112 2233445554422
Q ss_pred CCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeE
Q 004475 374 NDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 453 (751)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l 453 (751)
..|.+||+.+++....+..... .+. .++|+||++.|+... . -+.|
T Consensus 314 --------------------~~i~v~d~~~~~~~~~~~~~~~----~v~-------~~~~s~~~~~l~s~~-~---dg~i 358 (408)
T 4a11_B 314 --------------------STIAVYTVYSGEQITMLKGHYK----TVD-------CCVFQSNFQELYSGS-R---DCNI 358 (408)
T ss_dssp --------------------TEEEEEETTTCCEEEEECCCSS----CEE-------EEEEETTTTEEEEEE-T---TSCE
T ss_pred --------------------CEEEEEECcCCcceeeeccCCC----eEE-------EEEEcCCCCEEEEEC-C---CCeE
Confidence 2789999998877555442211 122 258999998777543 2 2458
Q ss_pred EEEEcCCCce
Q 004475 454 HILSWPLKKS 463 (751)
Q Consensus 454 ~~~~~~~g~~ 463 (751)
.++++.+++.
T Consensus 359 ~iw~~~~~~~ 368 (408)
T 4a11_B 359 LAWVPSLYEP 368 (408)
T ss_dssp EEEEECC---
T ss_pred EEEeCCCCCc
Confidence 8888877653
No 309
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.45 E-value=2.8e-11 Score=138.21 Aligned_cols=290 Identities=10% Similarity=0.039 Sum_probs=170.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC------eeeccCCCCccccceeeeeEEecCCcEEEEee
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------AKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~------~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~ 105 (751)
.+...+|+||+..++.+. .....|.++++..+. .+.++.+.. .+..++|||||++|+..+
T Consensus 384 ~V~~v~~~~~~~~~l~s~---------s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSA---------SRDKSIILWKLTKDDKAYGVAQRRLTGHSH-----FVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CEEEEECCTTCCSEEEEE---------ETTSEEEEEECCCSTTCSCEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred eeEEEEecCCCCCEEEEE---------eCCCcEEEEEccCCCcccccccceecCCCC-----cEEEEEECCCCCEEEEEe
Confidence 578899999976555543 233566677765432 123332222 477899999999998775
Q ss_pred cCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-CceecCCC-ceEEeeee
Q 004475 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEP 182 (751)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~~-~~~~~~~~ 182 (751)
.+ ..|.++|+ +| ..+.+..+ ..+..++|
T Consensus 450 ~D-------------------------------------------------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 WD-------------------------------------------------GELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp TT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CC-------------------------------------------------CcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 43 47888888 66 44555555 77899999
Q ss_pred CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (751)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~ 262 (751)
||||++|+..+.+ ..+.+||..+.....+.... ......+..+.|+|++...++++..
T Consensus 481 s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 481 SLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGG---------EGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSST---------TSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred eCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCC---------CCCCCcEEEEEEeCCCCcceEEEEe
Confidence 9999999876544 35889998765443332111 1122336689999998532333221
Q ss_pred ccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
..+.|.++++.. ......+..+...+. +.|||||+.|+..+. ...|.+.++.++ +.+.
T Consensus 539 -----------~d~~v~vwd~~~--~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~----~~~~ 597 (694)
T 3dm0_A 539 -----------WDKTVKVWNLSN--CKLRSTLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEG----KKLY 597 (694)
T ss_dssp -----------TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTT----EEEE
T ss_pred -----------CCCeEEEEECCC--CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCC----ceEE
Confidence 235788888751 222334445566677 999999998887652 234556666664 2222
Q ss_pred eccc-ccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhh-
Q 004475 342 DRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE- 419 (751)
Q Consensus 342 ~~~~-~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~- 419 (751)
.... ..+.. ++||||+..|+.... ..|.+||+.+++..............
T Consensus 598 ~~~~~~~v~~------~~~sp~~~~l~~~~~----------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~ 649 (694)
T 3dm0_A 598 SLEANSVIHA------LCFSPNRYWLCAATE----------------------HGIKIWDLESKSIVEDLKVDLKAEAEK 649 (694)
T ss_dssp CCBCSSCEEE------EEECSSSSEEEEEET----------------------TEEEEEETTTTEEEEEECCCCC-----
T ss_pred EecCCCcEEE------EEEcCCCcEEEEEcC----------------------CCEEEEECCCCCChhhhcccccccccc
Confidence 1111 11111 789999988766551 25888999888764433221100000
Q ss_pred ----ceeeeec---CCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 420 ----TAVALVF---GQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 420 ----~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
....... ....++|||||+.|+... . -+.|.++++.
T Consensus 650 ~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs-~---Dg~i~iW~i~ 692 (694)
T 3dm0_A 650 ADNSGPAATKRKVIYCTSLNWSADGSTLFSGY-T---DGVIRVWGIG 692 (694)
T ss_dssp -----------CCCCEEEEEECTTSSEEEEEE-T---TSEEEEEEC-
T ss_pred ccccccccCCceeEEeeeEEEcCCCCEEEEEc-C---CCeEEEEecc
Confidence 0000000 012368999999877543 2 2457777653
No 310
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.18 E-value=6.1e-15 Score=149.86 Aligned_cols=198 Identities=11% Similarity=0.055 Sum_probs=120.3
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-------hhHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-------RFVEQLVSS 584 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-------~~~~~~~~d 584 (751)
.|+||++||.+. +...|. .+...|+ +||.|++ ++.+|+|.+.... ....+..+|
T Consensus 25 ~p~vv~lHG~~~-----------~~~~~~----~~~~~l~-~g~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 3b12_A 25 GPALLLLHGFPQ-----------NLHMWA----RVAPLLA-NEYTVVC---ADLRGYGGSSKPVGAPDHANYSFRAMASD 85 (304)
Confidence 478999999641 111221 2233444 8999999 6667887765431 123344566
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc---------------------c
Q 004475 585 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---------------------F 643 (751)
Q Consensus 585 ~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~---------------------~ 643 (751)
+.++++.+ +.++++++||||||.+|+.+|.++|++++++|++++........ .
T Consensus 86 l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3b12_A 86 QRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159 (304)
Confidence 66666554 33579999999999999999999999999999998754311000 0
Q ss_pred ----------Ccccc-ccc-------ch--hhHHHH-----------------Hhc---Cc----ccccCCCCCCEEEEE
Q 004475 644 ----------GFQTE-FRT-------LW--EATNVY-----------------IEM---SP----ITHANKIKKPILIIH 679 (751)
Q Consensus 644 ----------~~~~~-~~~-------~~--~~~~~~-----------------~~~---~~----~~~~~~~~~P~li~~ 679 (751)
.+... ... .. ...+.+ ... .. ...+.++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 239 (304)
T 3b12_A 160 PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS 239 (304)
Confidence 00000 000 00 000000 000 00 001567899999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 680 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 680 G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
|++|..++ +......+.+.+. .++++++ ++||... .+..+.+.+.+.+||.+...
T Consensus 240 G~~D~~~~-~~~~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 240 GSAGLMHS-LFEMQVVWAPRLA----NMRFASL-PGGHFFV-DRFPDDTARILREFLSDARS 294 (304)
Confidence 99996553 1344333333332 3567778 9999876 56677889999999988754
No 311
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.45 E-value=5.9e-12 Score=134.40 Aligned_cols=217 Identities=11% Similarity=0.084 Sum_probs=136.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|.+|+..+ .....+.. ....+....|+|||++|+... ....|.++++.+++...........
T Consensus 130 g~i~i~~~~~----~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 130 GELRLWNKTG----ALLNVLNF--HRAPIVSVKWNKDGTHIISMD----------VENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp SCEEEEETTS----CEEEEECC--CCSCEEEEEECTTSSEEEEEE----------TTCCEEEEETTTTEEEEEECCC---
T ss_pred CeEEEEeCCC----CeeeeccC--CCccEEEEEECCCCCEEEEEe----------cCCeEEEEECCCCcEEEEeeccccC
Confidence 4688888544 44444442 233688999999999998863 3467888898887754433322210
Q ss_pred c-----------cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhh
Q 004475 85 L-----------NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (751)
Q Consensus 85 ~-----------~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (751)
. ...+..+.|+|++. ++....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------------------------------------------- 225 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDK-FVIPGP----------------------------------------------- 225 (425)
T ss_dssp ------------CCCBSCCEEEETTE-EEEECG-----------------------------------------------
T ss_pred ccceeeccccCCcceeeEEEEcCCCE-EEEEcC-----------------------------------------------
Confidence 0 00056789999986 443321
Q ss_pred heeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475 154 YTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (751)
Q Consensus 154 ~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 230 (751)
...|+++++ +++ ...+..+ ..+..++|+|||++|+....+ ..+.+|++.+++......
T Consensus 226 --~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~---- 286 (425)
T 1r5m_A 226 --KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD-------------GTLRIWHGGNGNSQNCFY---- 286 (425)
T ss_dssp --GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT-------------SCEEEECSSSBSCSEEEC----
T ss_pred --CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCccceEec----
Confidence 146888888 553 3444444 778899999999988876533 358899988664432211
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDS 309 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg 309 (751)
.....+..+.|+||| . ++... ..+.|+++++.. +.....+......+. +.|+|||
T Consensus 287 --------~~~~~i~~~~~~~~~-~-l~~~~------------~d~~i~i~d~~~--~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 287 --------GHSQSIVSASWVGDD-K-VISCS------------MDGSVRLWSLKQ--NTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp --------CCSSCEEEEEEETTT-E-EEEEE------------TTSEEEEEETTT--TEEEEEEECTTCCEEEEEECTTS
T ss_pred --------CCCccEEEEEECCCC-E-EEEEe------------CCCcEEEEECCC--CcEeEecccCCccEEEEEEcCCC
Confidence 112335689999999 4 55544 335888898851 222233333455667 9999999
Q ss_pred ceEEEeeeecccceeEEEecCCC
Q 004475 310 LALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 310 ~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
+.|+.... ...|.++++.+
T Consensus 343 ~~l~~~~~----dg~i~i~~~~~ 361 (425)
T 1r5m_A 343 QKYAVAFM----DGQVNVYDLKK 361 (425)
T ss_dssp SEEEEEET----TSCEEEEECHH
T ss_pred CEEEEEEC----CCeEEEEECCC
Confidence 98887662 23455566654
No 312
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.44 E-value=6e-11 Score=120.92 Aligned_cols=245 Identities=12% Similarity=0.069 Sum_probs=153.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|.+|++.+ ++...... .....+...+|||||++|+... ....|.++++.+++..........
T Consensus 45 g~i~iw~~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~- 108 (312)
T 4ery_A 45 KLIKIWGAYD----GKFEKTIS-GHKLGISDVAWSSDSNLLVSAS----------DDKTLKIWDVSSGKCLKTLKGHSN- 108 (312)
T ss_dssp SCEEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTCCEEEEEECCSS-
T ss_pred CeEEEEeCCC----cccchhhc-cCCCceEEEEEcCCCCEEEEEC----------CCCEEEEEECCCCcEEEEEcCCCC-
Confidence 4688999977 76655431 2233578899999999998863 346788889988875443332221
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
.+..+.|+|+++.|+..+.+ ..|.++|+
T Consensus 109 ---~v~~~~~~~~~~~l~s~~~d-------------------------------------------------~~i~iwd~ 136 (312)
T 4ery_A 109 ---YVFCCNFNPQSNLIVSGSFD-------------------------------------------------ESVRIWDV 136 (312)
T ss_dssp ---CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEET
T ss_pred ---CEEEEEEcCCCCEEEEEeCC-------------------------------------------------CcEEEEEC
Confidence 36788999999998877442 46777888
Q ss_pred -CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCc
Q 004475 165 -DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 165 -~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~ 240 (751)
+++ ...+..+ ..+..+.|+|||+.|+....+ ..+.+||+.+++.. .+... .
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~~wd~~~~~~~~~~~~~------------~ 191 (312)
T 4ery_A 137 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-------------GLCRIWDTASGQCLKTLIDD------------D 191 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCS------------S
T ss_pred CCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCceeeEEecc------------C
Confidence 564 4455545 678899999999988776543 35889999865432 22111 1
Q ss_pred cCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC-ceEeEeecee--EE-EEEe-cCCceEEEe
Q 004475 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLR--FS-VSWC-DDSLALVNE 315 (751)
Q Consensus 241 ~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~--~~-~~~s-pdg~~l~~~ 315 (751)
...+..++|+|||+. ++... ..+.|.++++. .+. ...+...... .. ..++ +++++|+..
T Consensus 192 ~~~~~~~~~~~~~~~-l~~~~------------~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 192 NPPVSFVKFSPNGKY-ILAAT------------LDNTLKLWDYS---KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp CCCEEEEEECTTSSE-EEEEE------------TTTEEEEEETT---TTEEEEEECSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred CCceEEEEECCCCCE-EEEEc------------CCCeEEEEECC---CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEE
Confidence 122457899999998 55543 23578888875 222 1222211111 11 4455 566666654
Q ss_pred eeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 316 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
. ....|.+.++.++ +...........+.. ++|+|++..|+..+
T Consensus 256 ~----~dg~i~vwd~~~~--~~~~~~~~h~~~v~~------~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 256 S----EDNLVYIWNLQTK--EIVQKLQGHTDVVIS------TACHPTENIIASAA 298 (312)
T ss_dssp C----TTSCEEEEETTTC--CEEEEECCCSSCEEE------EEECSSSSEEEEEE
T ss_pred C----CCCEEEEEECCCc--hhhhhhhccCCcEEE------EeecCcCCceEEEE
Confidence 4 2345777777764 223322222232333 78999999888776
No 313
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.43 E-value=1.1e-11 Score=129.01 Aligned_cols=215 Identities=7% Similarity=0.020 Sum_probs=132.6
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCC---CCeEEEEEeecccccccCCceeEEEEEcCCCC-e-eecc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-A-KPLF 78 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPD---G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-~-~~lt 78 (751)
...|.+|++.+ ++...+........+...+|+|| |+.|+... ..+.|.++++.+++ . ..+.
T Consensus 43 d~~v~iw~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~ 108 (357)
T 3i2n_A 43 TGVIQLYEIQH----GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD----------FGGNLHIWNLEAPEMPVYSVK 108 (357)
T ss_dssp CEEEEEEEECS----SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE----------TTSCEEEECTTSCSSCSEEEC
T ss_pred CcEEEEEeCCC----CcccceeeecccCcEEEEEEcCCCCCCceEEEec----------CCCeEEEEeCCCCCccEEEEE
Confidence 45799999988 87765543333346889999999 68888753 34678888888776 3 3332
Q ss_pred CCCCccccceeeee------EEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhh
Q 004475 79 ESPDICLNAVFGSF------VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFD 152 (751)
Q Consensus 79 ~~~~~~~~~~~~~~------~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (751)
.... .+..+ +|+|||+.|+..+.+
T Consensus 109 ~~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d--------------------------------------------- 138 (357)
T 3i2n_A 109 GHKE-----IINAIDGIGGLGIGEGAPEIVTGSRD--------------------------------------------- 138 (357)
T ss_dssp CCSS-----CEEEEEEESGGGCC-CCCEEEEEETT---------------------------------------------
T ss_pred eccc-----ceEEEeeccccccCCCccEEEEEeCC---------------------------------------------
Confidence 2222 24444 568999998877442
Q ss_pred hheeeEEEEEcC-CCC--ceecCCC-----ceEEeee----eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce
Q 004475 153 YYTTAQLVLGSL-DGT--AKDFGTP-----AVYTAVE----PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (751)
Q Consensus 153 ~~~~~~l~~~~~-~G~--~~~lt~~-----~~~~~~~----~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (751)
..|.++++ +++ ...+... ..+..+. |+|||+.|+....+ ..+.+||+.+++
T Consensus 139 ----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~ 201 (357)
T 3i2n_A 139 ----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMA 201 (357)
T ss_dssp ----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTE
T ss_pred ----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCc
Confidence 35777777 442 3333322 2455555 89999998876543 368999999876
Q ss_pred eeeeccCCCCCCCCCccCCccCCCceeeeec---CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE--
Q 004475 221 VRELCDLPPAEDIPVCYNSVREGMRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-- 295 (751)
Q Consensus 221 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp---dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-- 295 (751)
........ ..+..+.|+| +++. ++... ..+.|+++++.. +.....+.
T Consensus 202 ~~~~~~~~-------------~~v~~~~~~~~~~~~~~-l~~~~------------~dg~i~i~d~~~--~~~~~~~~~~ 253 (357)
T 3i2n_A 202 LRWETNIK-------------NGVCSLEFDRKDISMNK-LVATS------------LEGKFHVFDMRT--QHPTKGFASV 253 (357)
T ss_dssp EEEEEECS-------------SCEEEEEESCSSSSCCE-EEEEE------------STTEEEEEEEEE--EETTTEEEEE
T ss_pred eeeecCCC-------------CceEEEEcCCCCCCCCE-EEEEC------------CCCeEEEEeCcC--CCcccceeee
Confidence 65432222 2356889999 8887 55543 235778887741 11222222
Q ss_pred ---eeceeEE-EEEecCCce-EEEeeeecccceeEEEec
Q 004475 296 ---KLDLRFS-VSWCDDSLA-LVNETWYKTSQTRTWLVC 329 (751)
Q Consensus 296 ---~~~~~~~-~~~spdg~~-l~~~~~~~~~~~~l~~~~ 329 (751)
.....+. +.|+|+++. |+... ..+.-.+|.+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~ 290 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAG--GAGGLHLWKYE 290 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEE--TTSEEEEEEEE
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEe--CCCcEEEeecC
Confidence 4455667 999999994 54443 12333455444
No 314
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.3e-10 Score=118.21 Aligned_cols=272 Identities=12% Similarity=0.060 Sum_probs=164.2
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+| |||++|+... ..+.|.++++.+++.......... .+..++|+|||+.|+....+
T Consensus 20 ~v~~~~~-~~~~~l~s~~----------~dg~v~vw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d---- 80 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVS----------RDGTVRLWSKDDQWLGTVVYTGQG----FLNSVCYDSEKELLLFGGKD---- 80 (313)
T ss_dssp CEEEEEE-EETTEEEEEE----------TTSEEEEEEESSSEEEEEEEECSS----CEEEEEEETTTTEEEEEETT----
T ss_pred CcEEEEe-cCCCEEEEEE----------cCCcEEEEECCCCEEEEEeecCCc----cEEEEEECCCCCEEEEecCC----
Confidence 5788899 9999988753 346788888877765444332221 47789999999999887543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC----CceecCCC-ceEEeeeeCCC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG----TAKDFGTP-AVYTAVEPSPD 185 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G----~~~~lt~~-~~~~~~~~SpD 185 (751)
..+.++++ +. ....+..+ ..+..+.| +
T Consensus 81 ---------------------------------------------g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 81 ---------------------------------------------TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp ---------------------------------------------SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred ---------------------------------------------CeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 24455555 22 23344434 66777888 6
Q ss_pred CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec-CCCceEEEEEecc
Q 004475 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (751)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~~i~~~~~~~ 264 (751)
++.|+....+ ..+.+|| .......+..+ ...+..+.|+| +++. ++...
T Consensus 114 ~~~l~~~~~d-------------~~i~~~d-~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~-l~~~~--- 162 (313)
T 3odt_A 114 DGVVISGSWD-------------KTAKVWK-EGSLVYNLQAH-------------NASVWDAKVVSFSENK-FLTAS--- 162 (313)
T ss_dssp TTEEEEEETT-------------SEEEEEE-TTEEEEEEECC-------------SSCEEEEEEEETTTTE-EEEEE---
T ss_pred CCEEEEEeCC-------------CCEEEEc-CCcEEEecccC-------------CCceeEEEEccCCCCE-EEEEE---
Confidence 7777765433 3588888 33333333222 12345788888 7776 55543
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEe-eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 342 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 342 (751)
..+.|.+++.. .....+.. ....+. +.|+|+++ |+... ....|.+.++.++ +......
T Consensus 163 ---------~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 163 ---------ADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp ---------TTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTC--CEEEEEE
T ss_pred ---------CCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCch--hhhhhhh
Confidence 23567777752 23333333 455566 99999999 55443 2346777788764 2233222
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhcee
Q 004475 343 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 422 (751)
Q Consensus 343 ~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 422 (751)
.....+.. ++|+|||+ |+..+. ...|++||+.+++.......... .+.
T Consensus 223 ~~~~~i~~------~~~~~~~~-l~~~~~---------------------dg~v~iwd~~~~~~~~~~~~~~~----~i~ 270 (313)
T 3odt_A 223 GHESFVYC------IKLLPNGD-IVSCGE---------------------DRTVRIWSKENGSLKQVITLPAI----SIW 270 (313)
T ss_dssp CCSSCEEE------EEECTTSC-EEEEET---------------------TSEEEEECTTTCCEEEEEECSSS----CEE
T ss_pred cCCceEEE------EEEecCCC-EEEEec---------------------CCEEEEEECCCCceeEEEeccCc----eEE
Confidence 22222222 78999994 665552 23799999998877655443221 122
Q ss_pred eeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 423 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 423 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
.++|+||++ ++. ... -+.++++++.+++..
T Consensus 271 -------~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 271 -------SVDCMSNGD-IIV-GSS---DNLVRIFSQEKSRWA 300 (313)
T ss_dssp -------EEEECTTSC-EEE-EET---TSCEEEEESCGGGCC
T ss_pred -------EEEEccCCC-EEE-EeC---CCcEEEEeCCCCcee
Confidence 258999998 332 222 346888998776543
No 315
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.41 E-value=7.3e-13 Score=132.71 Aligned_cols=144 Identities=16% Similarity=0.109 Sum_probs=98.4
Q ss_pred CCCCCCcEEEEEeChHHHHHHHHHHhCCCcee-EEEEccCCCCCCCCc-cCc--ccc---cccchhhHHHHHhcCccccc
Q 004475 596 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC-CGIARSGSYNKTLTP-FGF--QTE---FRTLWEATNVYIEMSPITHA 668 (751)
Q Consensus 596 ~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~-~~v~~~~~~d~~~~~-~~~--~~~---~~~~~~~~~~~~~~~~~~~~ 668 (751)
..+|++||+|+|+|+||+||+.+++.+|+.|+ +++++++........ ... ... ....+.........+++..+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 45899999999999999999999999999998 877776532111000 000 000 00001111111111344444
Q ss_pred CCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC--cEEEEEeCCCCCcCCcccc------------------HHH
Q 004475 669 NKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA--LSRLVLLPFEHHVYAAREN------------------VMH 727 (751)
Q Consensus 669 ~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~------------------~~~ 727 (751)
.+++ +|+|++||+.|.+|| +.++++++++|++.+. +++++++++++|.+..... -.+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred HcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 4443 699999999999999 9999999999998873 7999999999998753322 134
Q ss_pred HHHHHHHHHHHHhc
Q 004475 728 VIWETDRWLQKYCL 741 (751)
Q Consensus 728 ~~~~~~~fl~~~l~ 741 (751)
...+|++||...+.
T Consensus 164 ~~~~i~~ff~g~~~ 177 (318)
T 2d81_A 164 GAGAALKWIYGSLN 177 (318)
T ss_dssp HHHHHHHHHHSSCC
T ss_pred HHHHHHHHHhccCC
Confidence 56789999987664
No 316
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.41 E-value=1.8e-11 Score=128.13 Aligned_cols=229 Identities=14% Similarity=0.118 Sum_probs=135.4
Q ss_pred cceeEEeecCCCCCCCC---cccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCC
Q 004475 4 FTGIGIHRLLPDDSLGP---EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~---~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~ 80 (751)
...|++|++.+ ++ ...+.. ....+...+|+|||+.|+... ....|.++++.+++..+....
T Consensus 29 d~~v~i~~~~~----~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 29 NHEVHIYEKSG----NKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCG----------TDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp SSEEEEEEEET----TEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEE----------TTSCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEeCCC----CcEEeeeeecC--CCCcccEEEEeCCCCEEEEEc----------CCCeEEEEECCCCeeeeeEEe
Confidence 45799999988 74 333432 233688999999999998864 235677777777763332211
Q ss_pred CCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 81 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
... ...+..++|+|||+.|+....+ ..|.
T Consensus 93 ~~~--~~~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~v~ 121 (372)
T 1k8k_C 93 LRI--NRAARCVRWAPNEKKFAVGSGS-------------------------------------------------RVIS 121 (372)
T ss_dssp CCC--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SSEE
T ss_pred ecC--CCceeEEEECCCCCEEEEEeCC-------------------------------------------------CEEE
Confidence 111 1146789999999999887532 2455
Q ss_pred EEcC-CCC----ceec-CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeec-----cCC
Q 004475 161 LGSL-DGT----AKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC-----DLP 228 (751)
Q Consensus 161 ~~~~-~G~----~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-----~~~ 228 (751)
++++ .++ ...+ ..+ ..+..++|+|||++|+....+ ..+.+||+.......-. ...
T Consensus 122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~ 188 (372)
T 1k8k_C 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSK 188 (372)
T ss_dssp EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSC
T ss_pred EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------------CCEEEEEcccccccccccccccccc
Confidence 5555 332 2333 222 678899999999998876543 35788986422110000 000
Q ss_pred CCCCC-CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEe
Q 004475 229 PAEDI-PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWC 306 (751)
Q Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~s 306 (751)
..... ...+......+..+.|+|||+. |+... ..+.|.++++.. +.....+......+. +.|+
T Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~------------~d~~i~i~d~~~--~~~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 189 MPFGELMFESSSSCGWVHGVCFSANGSR-VAWVS------------HDSTVCLADADK--KMAVATLASETLPLLAVTFI 253 (372)
T ss_dssp CCTTCEEEECCCCSSCEEEEEECSSSSE-EEEEE------------TTTEEEEEEGGG--TTEEEEEECSSCCEEEEEEE
T ss_pred cchhhheEecCCCCCeEEEEEECCCCCE-EEEEe------------CCCEEEEEECCC--CceeEEEccCCCCeEEEEEe
Confidence 00000 0111122334668999999987 55543 235788888751 223344444455667 9999
Q ss_pred cCCceEEEeeeecccceeEEEecC
Q 004475 307 DDSLALVNETWYKTSQTRTWLVCP 330 (751)
Q Consensus 307 pdg~~l~~~~~~~~~~~~l~~~~~ 330 (751)
|||+.|+.+. .+.-.+|.++.
T Consensus 254 ~~~~~l~~~~---d~~i~i~~~~~ 274 (372)
T 1k8k_C 254 TESSLVAAGH---DCFPVLFTYDS 274 (372)
T ss_dssp ETTEEEEEET---TSSCEEEEEET
T ss_pred cCCCEEEEEe---CCeEEEEEccC
Confidence 9999776552 33345665544
No 317
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.41 E-value=9.7e-11 Score=119.54 Aligned_cols=254 Identities=12% Similarity=0.081 Sum_probs=155.3
Q ss_pred ceeEEeecCCCCCCCCcccccCCCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
..|++||+.+ |+..++-.+.. ...+...+|||||++||..+ ....|.++++++++..+...+..
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs----------~Dg~v~iw~~~~~~~~~~~~~h~- 109 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT----------SSAEVQLWDVQQQKRLRNMTSHS- 109 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECCS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE----------CCCcEEEeecCCceeEEEecCcc-
Confidence 4689999998 98776543322 33578999999999998753 34678888998887544433222
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.....++++++.|+..+.. ..+..++
T Consensus 110 -----~~~~~~~~~~~~l~s~~~~-------------------------------------------------~~~~~~~ 135 (318)
T 4ggc_A 110 -----ARVGSLSWNSYILSSGSRS-------------------------------------------------GHIHHHD 135 (318)
T ss_dssp -----SCEEEEEEETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred -----ceEEEeecCCCEEEEEecC-------------------------------------------------CceEeee
Confidence 2334677888877766432 2334444
Q ss_pred C-CC--CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 164 L-DG--TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 164 ~-~G--~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
. .+ ....+..+ ..+....|+++|++|+....+ ..+.+||+.+++....... ....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~--------~~~~ 194 (318)
T 4ggc_A 136 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQ--------TFTQ 194 (318)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSE--------EECC
T ss_pred cCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCccccccee--------eecc
Confidence 4 22 22333333 667788999999998866443 3588999976542211000 0011
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY 318 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~ 318 (751)
....+..+.|+|++..++...... ..+.|.+++.. .............+. ..|+|+++.++..+..
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~----------~~~~i~lwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGT----------SDRHIRIWNVC---SGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECT----------TTCEEEEEETT---TCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceEEEEecCCCCcEEEEEecC----------CCCEEEEEecc---cccccccccceeeeeeeeecccccceEEEEEc
Confidence 112345789999999844443311 22467777764 333333344455556 8999999998876632
Q ss_pred cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 319 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
....|.+.+..++ +...........+.. ++|||||+.|+..+.
T Consensus 262 --~d~~i~iwd~~~~--~~~~~l~gH~~~V~~------l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 262 --AQNQLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAAA 304 (318)
T ss_dssp --TTCCEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEET
T ss_pred --CCCEEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEec
Confidence 2346777787774 223222222333333 889999999988773
No 318
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.39 E-value=4.8e-11 Score=136.29 Aligned_cols=220 Identities=13% Similarity=0.078 Sum_probs=134.7
Q ss_pred cceeEEeecCCCCCC-CC-cccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 4 FTGIGIHRLLPDDSL-GP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~-g~-~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
...|.+|++..+... +. .+.+++ +...+...+|||||++|+..+ ....|.++++.+++..+...+.
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~~~~~--h~~~v~~v~~s~~g~~l~sgs----------~Dg~v~vwd~~~~~~~~~~~~h 471 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQRRLTG--HSHFVEDVVLSSDGQFALSGS----------WDGELRLWDLAAGVSTRRFVGH 471 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEEEEEC--CSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEEEccCCCcccccccceecC--CCCcEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCcceeEEeCC
Confidence 457899999761111 11 123332 223578899999999998753 3468888899887654433222
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. .+..++|||||+.|+..+.+ ..|.+
T Consensus 472 ~~----~v~~~~~s~~~~~l~s~s~D-------------------------------------------------~~i~i 498 (694)
T 3dm0_A 472 TK----DVLSVAFSLDNRQIVSASRD-------------------------------------------------RTIKL 498 (694)
T ss_dssp SS----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEEE
T ss_pred CC----CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CEEEE
Confidence 21 37789999999999877543 35666
Q ss_pred EcCCCC-ceecC----CC-ceEEeeeeCCCCce-EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 162 GSLDGT-AKDFG----TP-AVYTAVEPSPDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 162 ~~~~G~-~~~lt----~~-~~~~~~~~SpDG~~-i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
+++.+. ...+. .+ ..+..++|+|++.. ++++... ...|.+||+.+.+.....
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------------d~~v~vwd~~~~~~~~~~--------- 557 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW------------DKTVKVWNLSNCKLRSTL--------- 557 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET------------TSCEEEEETTTCCEEEEE---------
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC------------CCeEEEEECCCCcEEEEE---------
Confidence 676442 22221 12 55789999999842 3333322 346889999876543221
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALV 313 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~ 313 (751)
......+..++|||||+. |+..+ ..+.|.++++. .+...........+. +.||||+..|+
T Consensus 558 ---~~h~~~v~~v~~spdg~~-l~sg~------------~Dg~i~iwd~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 558 ---AGHTGYVSTVAVSPDGSL-CASGG------------KDGVVLLWDLA---EGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp ---CCCSSCEEEEEECTTSSE-EEEEE------------TTSBCEEEETT---TTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred ---cCCCCCEEEEEEeCCCCE-EEEEe------------CCCeEEEEECC---CCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 112233668999999997 55543 23578888875 222211122334466 89999999877
Q ss_pred EeeeecccceeEEEecCCCC
Q 004475 314 NETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~ 333 (751)
.... ..|.+.++.++
T Consensus 619 ~~~~-----~~i~iwd~~~~ 633 (694)
T 3dm0_A 619 AATE-----HGIKIWDLESK 633 (694)
T ss_dssp EEET-----TEEEEEETTTT
T ss_pred EEcC-----CCEEEEECCCC
Confidence 6542 23666676664
No 319
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.39 E-value=2.1e-11 Score=122.87 Aligned_cols=208 Identities=15% Similarity=0.110 Sum_probs=121.9
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 568 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~ 568 (751)
.++..+.....- ..|.||++||.+. +...|. .... .+..+|.|++ .+.+|+
T Consensus 12 ~~~~~~~~~~~g----------~g~~~vllHG~~~-----------~~~~w~----~~~~-~l~~~~~vi~---~Dl~G~ 62 (291)
T 3qyj_A 12 TTEARINLVKAG----------HGAPLLLLHGYPQ-----------THVMWH----KIAP-LLANNFTVVA---TDLRGY 62 (291)
T ss_dssp CSSCEEEEEEEC----------CSSEEEEECCTTC-----------CGGGGT----TTHH-HHTTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEEcC----------CCCeEEEECCCCC-----------CHHHHH----HHHH-HHhCCCEEEE---EcCCCC
Confidence 466667655431 1367999999641 112221 1222 3467999999 666788
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC----
Q 004475 569 GDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN---- 637 (751)
Q Consensus 569 g~~~~~~-------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d---- 637 (751)
|.+.... .......+|+.+.++.+ ...++.++||||||.+|+.+|.++|++++++|++++...
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~ 136 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL------GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMY 136 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHH
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc------CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhh
Confidence 7765432 12445556555555443 235799999999999999999999999999998864310
Q ss_pred -CC--------------CCccCccc----cc-------------c--cch------------hhH-------HHHHhcC-
Q 004475 638 -KT--------------LTPFGFQT----EF-------------R--TLW------------EAT-------NVYIEMS- 663 (751)
Q Consensus 638 -~~--------------~~~~~~~~----~~-------------~--~~~------------~~~-------~~~~~~~- 663 (751)
.. ..+..... .. . ... ..+ ..|....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 3qyj_A 137 RTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAAT 216 (291)
T ss_dssp HTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTT
T ss_pred hcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccc
Confidence 00 00000000 00 0 000 000 0011100
Q ss_pred ------cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475 664 ------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 737 (751)
Q Consensus 664 ------~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 737 (751)
....+.++++|+|+++|++|...+ ... ..+.+......++..+++ +||.+. .+..+++.+.+.+||.
T Consensus 217 ~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~--~~~---~~~~~~~~~~~~~~~~~~-~GH~~~-~E~P~~v~~~i~~fL~ 289 (291)
T 3qyj_A 217 IDLEHDELDMKQKISCPVLVLWGEKGIIGR--KYD---VLATWRERAIDVSGQSLP-CGHFLP-EEAPEETYQAIYNFLT 289 (291)
T ss_dssp HHHHHHHTTTTCCBCSCEEEEEETTSSHHH--HSC---HHHHHHTTBSSEEEEEES-SSSCHH-HHSHHHHHHHHHHHHH
T ss_pred cchhhcchhcCCccccceEEEecccccccc--hhh---HHHHHHhhcCCcceeecc-CCCCch-hhCHHHHHHHHHHHHh
Confidence 011246789999999999997532 111 122233333467778886 799765 7778899999999986
Q ss_pred H
Q 004475 738 K 738 (751)
Q Consensus 738 ~ 738 (751)
.
T Consensus 290 ~ 290 (291)
T 3qyj_A 290 H 290 (291)
T ss_dssp C
T ss_pred c
Confidence 3
No 320
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.38 E-value=1.8e-11 Score=125.10 Aligned_cols=197 Identities=14% Similarity=0.138 Sum_probs=118.9
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCC---chhHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEA 587 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~ 587 (751)
.|+||++||.+.. ...| ..+...|++ .+|.|++ ++.+|+|.+... .......++|+.+
T Consensus 38 ~p~lvllHG~~~~-----------~~~w----~~~~~~L~~~~~~~via---~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHS-----------ALSW----AVFTAAIISRVQCRIVA---LDLRSHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCC-----------GGGG----HHHHHHHHTTBCCEEEE---ECCTTSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCcc-----------cccH----HHHHHHHhhcCCeEEEE---ecCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 4789999996411 1111 123344554 2899999 677788877432 2346778889989
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCCCCC------------CccCcccc-----
Q 004475 588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYNKTL------------TPFGFQTE----- 648 (751)
Q Consensus 588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~d~~~------------~~~~~~~~----- 648 (751)
+++.+... + +.++.|+||||||.+|+.+|.+ +|+ ++++|++++...... .+..+...
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 98888431 1 2589999999999999999985 566 899988765310000 00000000
Q ss_pred ------cccchh-----hHHHHHh-------------------cC--------------cccccCCCCCCEEEEEcCCCC
Q 004475 649 ------FRTLWE-----ATNVYIE-------------------MS--------------PITHANKIKKPILIIHGEVDD 684 (751)
Q Consensus 649 ------~~~~~~-----~~~~~~~-------------------~~--------------~~~~~~~~~~P~li~~G~~D~ 684 (751)
...... .+..... .. ....+.++++|+|+++|+.|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 000000 0000000 00 001122578999999999998
Q ss_pred CCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475 685 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 740 (751)
Q Consensus 685 ~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 740 (751)
+.+ ... ...+. ..+++++++++||... .+..+.+...+.+||.+..
T Consensus 256 ~~~--~~~----~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 256 LDK--DLT----IGQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp CCH--HHH----HHHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHTT
T ss_pred ccc--HHH----HHhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhcc
Confidence 653 221 11221 2468999999999876 5667889999999997653
No 321
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.38 E-value=6.3e-11 Score=120.25 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=148.2
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|.+||+.+ ++....... ....+...+|+|||++|+..+ ....|.++++.+++..........
T Consensus 34 dg~v~lWd~~~----~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s----------~d~~i~vwd~~~~~~~~~~~~h~~ 98 (304)
T 2ynn_A 34 SGRVELWNYET----QVEVRSIQV-TETPVRAGKFIARKNWIIVGS----------DDFRIRVFNYNTGEKVVDFEAHPD 98 (304)
T ss_dssp TSEEEEEETTT----TEEEEEEEC-CSSCEEEEEEEGGGTEEEEEE----------TTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCcEEEEECCC----CceeEEeec-cCCcEEEEEEeCCCCEEEEEC----------CCCEEEEEECCCCcEEEEEeCCCC
Confidence 45789999988 665432211 223578899999999998853 346788889988875443322221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..++|+|+++.|+..+.+ ..|.++|
T Consensus 99 ----~v~~~~~~~~~~~l~sgs~D-------------------------------------------------~~v~lWd 125 (304)
T 2ynn_A 99 ----YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLWN 125 (304)
T ss_dssp ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEE
T ss_pred ----cEEEEEEcCCCCEEEEECCC-------------------------------------------------CeEEEEE
Confidence 37789999999998877543 3566777
Q ss_pred C-CC-Cc-eecCCC-ceEEeeeeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCcc
Q 004475 164 L-DG-TA-KDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCY 237 (751)
Q Consensus 164 ~-~G-~~-~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~ 237 (751)
+ ++ .. +.+..+ ..+..++|+| |++.|+..+.+ ..+.+||+...... .+...
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~---------- 182 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTG---------- 182 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT-------------SEEEEEETTCSSCSEEEECC----------
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC-------------CeEEEEECCCCCccceeccC----------
Confidence 7 44 33 234444 6788999999 56767655433 36889998754322 11111
Q ss_pred CCccCCCceeeeec--CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEE
Q 004475 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVN 314 (751)
Q Consensus 238 ~~~~~~~~~~~~sp--dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~ 314 (751)
....+..+.|+| |++. |+..+ ..+.|.++++.. +.....+......+. +.|+|+++.|+.
T Consensus 183 --~~~~v~~~~~~~~~~~~~-l~s~s------------~D~~i~iWd~~~--~~~~~~~~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 183 --QERGVNYVDYYPLPDKPY-MITAS------------DDLTIKIWDYQT--KSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp --CTTCEEEEEECCSTTCCE-EEEEE------------TTSEEEEEETTT--TEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred --CcCcEEEEEEEEcCCCCE-EEEEc------------CCCeEEEEeCCC--CccceeeCCCCCCEEEEEECCCCCEEEE
Confidence 112234567766 6665 44433 235788888851 223344445556677 899999998876
Q ss_pred eeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCE
Q 004475 315 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 365 (751)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~ 365 (751)
.+. ...|.+.+..+. +...........++. ++|+|+|..
T Consensus 246 ~s~----Dg~i~iWd~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~ 284 (304)
T 2ynn_A 246 GSE----DGTLKIWNSSTY--KVEKTLNVGLERSWC------IATHPTGRK 284 (304)
T ss_dssp EET----TSCEEEEETTTC--CEEEEECCSSSSEEE------EEECTTCGG
T ss_pred EcC----CCeEEEEECCCC--ceeeeccCCCccEEE------EEECCCCCc
Confidence 552 235666677664 222222222223333 778898863
No 322
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.38 E-value=4.8e-11 Score=128.67 Aligned_cols=184 Identities=10% Similarity=0.073 Sum_probs=116.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcC--CCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~--~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 109 (751)
.+...+|||||++|+++.. ....|.++++. +++..+..... .....+..++|+|||+.|+....+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~---------~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~-- 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD---------SDKSLLVFDVDKTSKNVLKLRKRF--CFSKRPNAISIAEDDTTVIIADKF-- 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG---------GGTEEEEEEECSSSSSCEEEEEEE--ECSSCEEEEEECTTSSEEEEEETT--
T ss_pred ceEEEEEcCCCCEEEEEEC---------CCCeEEEEECcCCCCceeeeeecc--cCCCCceEEEEcCCCCEEEEEeCC--
Confidence 3778899999999866542 23556666666 66544432110 001136789999999999887432
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce-----ecCCC-ceEEeeee
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-----DFGTP-AVYTAVEP 182 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-----~lt~~-~~~~~~~~ 182 (751)
..++++++ +++.. .+..+ ..+..++|
T Consensus 171 -----------------------------------------------g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 203 (450)
T 2vdu_B 171 -----------------------------------------------GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHL 203 (450)
T ss_dssp -----------------------------------------------SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEE
T ss_pred -----------------------------------------------CcEEEEecCCcccccccceeeecccCceEEEEE
Confidence 47888888 55332 23333 67889999
Q ss_pred CCC---CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEE
Q 004475 183 SPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (751)
Q Consensus 183 SpD---G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~ 259 (751)
+|| |++|+....+ ..|++||+.++...... +......+..++|+ ||+. |+.
T Consensus 204 sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~-----------~~~h~~~v~~~~~s-d~~~-l~s 257 (450)
T 2vdu_B 204 IKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKW-----------LFGHKHFVSSICCG-KDYL-LLS 257 (450)
T ss_dssp EECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEE-----------CCCCSSCEEEEEEC-STTE-EEE
T ss_pred cCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeee-----------ecCCCCceEEEEEC-CCCE-EEE
Confidence 999 8888776433 36889998765432210 01112345688999 9987 555
Q ss_pred EEeccCCCCccccCcccceeeccCCCCCCCC-ceEeE-------------------------eeceeEE-EEEecCCceE
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILH-------------------------KLDLRFS-VSWCDDSLAL 312 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~-------------------------~~~~~~~-~~~spdg~~l 312 (751)
.+ ..+.|.++++. .+. ...+. .....+. +.|+||++.|
T Consensus 258 ~~------------~d~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 258 AG------------GDDKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EE------------SSSEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred Ee------------CCCeEEEEECC---CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 43 23578888875 222 22222 1123456 8999999998
Q ss_pred EEee
Q 004475 313 VNET 316 (751)
Q Consensus 313 ~~~~ 316 (751)
+.+.
T Consensus 323 ~~~~ 326 (450)
T 2vdu_B 323 AFFV 326 (450)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 323
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.38 E-value=5.9e-11 Score=123.78 Aligned_cols=286 Identities=10% Similarity=0.080 Sum_probs=162.2
Q ss_pred cccceeecCC---CCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCCccccceeeeeEEecC----CcEEEE
Q 004475 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNN----STLLIF 103 (751)
Q Consensus 32 ~~~~p~~SPD---G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~~~~~~~~~~~~wspD----g~~l~~ 103 (751)
.+...+|||+ |..++++.. ....|.++++.+++. +.+...........+..++|+|+ |+.|+.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~---------~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATV---------GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEE---------ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEecccCCCCceEEEEC---------CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 5788999985 776666542 223788888876653 33321111111124778999999 667776
Q ss_pred eecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEee
Q 004475 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAV 180 (751)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~ 180 (751)
...+ ..|.++++ +++ ...+..+ ..+..+
T Consensus 91 ~~~d-------------------------------------------------g~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AGSR-------------------------------------------------GIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EETT-------------------------------------------------CEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ecCC-------------------------------------------------CEEEEEEchhceEeeeecCCCCcEEEE
Confidence 6432 47888888 564 3444434 778899
Q ss_pred eeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEE
Q 004475 181 EPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (751)
Q Consensus 181 ~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~ 259 (751)
+|+| |++.|+....+ ..|.+||+.+++....... +......+..+.|+|||+. ++.
T Consensus 122 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~-l~~ 178 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-------------HALRLWNIQTDTLVAIFGG---------VEGHRDEVLSADYDLLGEK-IMS 178 (366)
T ss_dssp EECSSCTTEEEEEETT-------------SCEEEEETTTTEEEEEECS---------TTSCSSCEEEEEECTTSSE-EEE
T ss_pred EECCCCCCEEEEEeCC-------------CeEEEEEeecCeEEEEecc---------cccccCceeEEEECCCCCE-EEE
Confidence 9999 88888776443 3689999987654433210 0112234678999999997 555
Q ss_pred EEeccCCCCccccCcccceeeccCCCCCCCCc-e----------------------------EeEeeceeEE-EEEecCC
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-E----------------------------ILHKLDLRFS-VSWCDDS 309 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~----------------------------~l~~~~~~~~-~~~spdg 309 (751)
.. ..+.|.++++. .... . ........+. +.|+ +
T Consensus 179 ~~------------~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 179 CG------------MDHSLKLWRIN---SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EE------------TTSCEEEEESC---SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred ec------------CCCCEEEEECC---CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 43 22466666664 1110 0 0001333445 7787 6
Q ss_pred ceEEEeeeecccceeEEEecCCCCCCc----------ceeee--ecccccccCCCCCCCeeeCCC--CCEEEEeeeecCC
Q 004475 310 LALVNETWYKTSQTRTWLVCPGSKDVA----------PRVLF--DRVFENVYSDPGSPMMTRTST--GTNVIAKIKKEND 375 (751)
Q Consensus 310 ~~l~~~~~~~~~~~~l~~~~~~~~~~~----------~~~l~--~~~~~~~~~~~~~~~~~~spD--G~~l~~~~~~~~~ 375 (751)
+.|+.... ...|.+.++.+.... ...+. ......+.. ++|+|| |+.|+....+
T Consensus 242 ~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~~~l~~~~~d--- 308 (366)
T 3k26_A 242 DLILSKSC----ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY------MRFSMDFWQKMLALGNQV--- 308 (366)
T ss_dssp TEEEEECS----SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC------CCCEECTTSSEEEEECTT---
T ss_pred CEEEEEec----CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEE------EEEcCCCCCcEEEEEecC---
Confidence 66665542 234555555443110 01111 111111222 779999 9988877622
Q ss_pred cceEEEEccCCCCCCCCCceeEEEecCCCceeE----EeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCC
Q 004475 376 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKER----IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEIT 451 (751)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 451 (751)
..|++||+.+++... .+..... ...+ ..++|+||++.|+... . -+
T Consensus 309 ------------------g~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v-------~~~~~s~~~~~l~s~~-~---dg 357 (366)
T 3k26_A 309 ------------------GKLYVWDLEVEDPHKAKCTTLTHHKC--GAAI-------RQTSFSRDSSILIAVC-D---DA 357 (366)
T ss_dssp ------------------SCEEEEECCSSSGGGCEEEEECCTTC--CSCE-------EEEEECTTSSEEEEEE-T---TS
T ss_pred ------------------CcEEEEECCCCCCccccceEEccccc--CCce-------EEEEeCCCCCeEEEEe-C---CC
Confidence 378899998875421 1111100 0011 2258999999877553 2 24
Q ss_pred eEEEEEcC
Q 004475 452 QYHILSWP 459 (751)
Q Consensus 452 ~l~~~~~~ 459 (751)
.|+++|+.
T Consensus 358 ~i~iwd~~ 365 (366)
T 3k26_A 358 SIWRWDRL 365 (366)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEec
Confidence 67777763
No 324
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.38 E-value=2e-11 Score=127.72 Aligned_cols=213 Identities=12% Similarity=0.003 Sum_probs=129.9
Q ss_pred CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC---------CeEEEE
Q 004475 489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVLA 559 (751)
Q Consensus 489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------G~~v~~ 559 (751)
.+|..|+...+.+.. +..|.||++||.+. + ...+. .....|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~-----------s---~~~~~-~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPG-----------T---PVEFL-DIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTC-----------C---GGGGH-HHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCC-----------C---HHHHH-HHHHHHhCcccccCCCCCCeEEEE
Confidence 468888887776543 12578999999641 1 11111 334455554 999999
Q ss_pred cCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 560 GPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 560 ~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
++.+|+|.+.... ....+..+++.++++.+ ..++++++||||||.+|+.+|.++|++++++++.++..
T Consensus 134 ---~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 134 ---PSLPGFGLSGPLKSAGWELGRIAMAWSKLMASL------GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ---ECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHT------TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred ---EcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 5566777664432 23445555555554432 33589999999999999999999999999999998643
Q ss_pred CCCCCcc---Cccccc----------------------------------------------ccchhh------------
Q 004475 637 NKTLTPF---GFQTEF----------------------------------------------RTLWEA------------ 655 (751)
Q Consensus 637 d~~~~~~---~~~~~~----------------------------------------------~~~~~~------------ 655 (751)
.....+. .+.... ...|..
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d 284 (388)
T 4i19_A 205 NLSGEPGELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRD 284 (388)
T ss_dssp CBCCCGGGGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHH
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHH
Confidence 2111000 000000 000000
Q ss_pred ------------------HHHHHhcC---c----ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475 656 ------------------TNVYIEMS---P----ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 710 (751)
Q Consensus 656 ------------------~~~~~~~~---~----~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~ 710 (751)
...|.+.. . ...+.++++|+++++|.+|...+ +.. +.+.+. ..-+++.
T Consensus 285 ~ll~~~~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~--p~~---~~~~~~--~~~~~~~ 357 (388)
T 4i19_A 285 LMLTHISLFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQP--VRS---LAERDF--KQIVHWA 357 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCC--CHH---HHHHHB--TTEEEEE
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccc--cHH---HHHHhC--CCeEEEE
Confidence 00111111 0 01344578999999999996554 332 222221 1236788
Q ss_pred EeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 711 LLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 711 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
+++++||... .+..+.+.+.+.+||.+.
T Consensus 358 ~~~~gGHf~~-~E~Pe~~~~~l~~fl~~~ 385 (388)
T 4i19_A 358 ELDRGGHFSA-MEEPDLFVDDLRTFNRTL 385 (388)
T ss_dssp ECSSCBSSHH-HHCHHHHHHHHHHHHHHH
T ss_pred ECCCCcCccc-hhcHHHHHHHHHHHHHHH
Confidence 8999999876 677889999999999864
No 325
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.37 E-value=1.3e-10 Score=117.60 Aligned_cols=231 Identities=13% Similarity=0.121 Sum_probs=131.4
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecC--CcEEEEeecCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~ 109 (751)
.+...+|||||++||..+ ....|.+++++++..+.+.....+ ...+..++|+|+ |+.|+..+.+
T Consensus 11 ~V~~~~~s~~g~~las~s----------~D~~v~iw~~~~~~~~~~~~l~gH--~~~V~~v~~s~~~~g~~l~s~s~D-- 76 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS----------SDKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYD-- 76 (297)
T ss_dssp CEEEEEECTTSSEEEEEE----------TTSCEEEEEBCSSCBCCCEEECCC--SSCEEEEEECCGGGCSEEEEEETT--
T ss_pred ceEEEEECCCCCEEEEEe----------CCCEEEEEecCCCCcEEEEEEccc--cCCeEEEEecCCCcCCEEEEEcCC--
Confidence 578899999999998864 235666677765432222111111 114778899864 8888877543
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC---ceecCCC-ceEEeeeeCC
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPSP 184 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~---~~~lt~~-~~~~~~~~Sp 184 (751)
..|.++++ +|+ ...+..+ ..+..++|+|
T Consensus 77 -----------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p 109 (297)
T 2pm7_B 77 -----------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (297)
T ss_dssp -----------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECC
T ss_pred -----------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCc
Confidence 36777777 553 2233334 6788999999
Q ss_pred C--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCC---------
Q 004475 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK--------- 253 (751)
Q Consensus 185 D--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG--------- 253 (751)
+ |+.|+..+.+ ..+.+|++.++..... ..+......+..++|+|++
T Consensus 110 ~~~g~~l~s~s~d-------------~~v~~wd~~~~~~~~~----------~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 110 HEYGPMLLVASSD-------------GKVSVVEFKENGTTSP----------IIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp GGGCSEEEEEETT-------------SEEEEEEBCSSSCBCC----------EEEECCSSCEEEEEECCCC---------
T ss_pred CCCCcEEEEEECC-------------CcEEEEEecCCCceee----------eeeecccCccceEeecCCcccccccCCC
Confidence 8 7887765443 3688899875421100 0011122345688999984
Q ss_pred ----CceEEEEEeccCCCCccccCcccceeeccCCCCCCCC----ceEeEeeceeEE-EEEecCC---ceEEEeeeeccc
Q 004475 254 ----PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----PEILHKLDLRFS-VSWCDDS---LALVNETWYKTS 321 (751)
Q Consensus 254 ----~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~l~~~~~~~~-~~~spdg---~~l~~~~~~~~~ 321 (751)
+. |+..+ ..+.|.++++.. +.. ...+......+. ++|+|++ +.|+..+ ...
T Consensus 167 ~~~~~~-l~sgs------------~D~~v~lwd~~~--~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~ 229 (297)
T 2pm7_B 167 TKESRK-FVTGG------------ADNLVKIWKYNS--DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDR 229 (297)
T ss_dssp ---CCE-EEEEE------------TTSCEEEEEEET--TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTS
T ss_pred CCCcce-EEEEc------------CCCcEEEEEEcC--CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCC
Confidence 33 44433 234677777641 111 122333455567 9999996 6666554 233
Q ss_pred ceeEEEecCCCCCCcceeeee--cccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 322 QTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 322 ~~~l~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.-.||.++.... .....+.. .....++. ++|+|||+.|+..+
T Consensus 230 ~v~iWd~~~~~~-~~~~~~~~~~~~~~~v~~------~~~s~~g~~las~~ 273 (297)
T 2pm7_B 230 TCIIWTQDNEQG-PWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (297)
T ss_dssp CEEEEEESSTTS-CCEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred cEEEEEeCCCCC-ccceeeeecccCCCcEEE------EEECCCCCEEEEEc
Confidence 345665543221 11112221 11112222 78999999998877
No 326
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.37 E-value=3.1e-10 Score=121.04 Aligned_cols=280 Identities=14% Similarity=0.151 Sum_probs=167.0
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 113 (751)
.-..||+++ .||.. ....|+++++.+|+..++.....+. ..+..++|||||++|+..+.+
T Consensus 109 ~~l~wS~~n-~lAvg-----------ld~tV~lWd~~tg~~~~~~~~~~~~--~~V~sv~fspdg~~lasgs~D------ 168 (420)
T 4gga_A 109 NLVDWSSGN-VLAVA-----------LDNSVYLWSASSGDILQLLQMEQPG--EYISSVAWIKEGNYLAVGTSS------ 168 (420)
T ss_dssp BCEEECTTS-EEEEE-----------ETTEEEEEETTTCCEEEEEECCSTT--CCEEEEEECTTSSEEEEEETT------
T ss_pred eeEEECCCC-EEEEE-----------eCCEEEEEECCCCCEEEEEEecCCC--CcEEEEEECCCCCEEEEEECC------
Confidence 457899875 67763 2378999999999877665433221 137899999999999987543
Q ss_pred CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCceEE
Q 004475 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVL 190 (751)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~ 190 (751)
..|.++++ +++ .+.+..+ ..+..+ ++|++.|+
T Consensus 169 -------------------------------------------g~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~l~ 203 (420)
T 4gga_A 169 -------------------------------------------AEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYILS 203 (420)
T ss_dssp -------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEE--EEETTEEE
T ss_pred -------------------------------------------CeEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCEEE
Confidence 45777787 663 3444444 444444 44677666
Q ss_pred EEEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
....+ ..+.+|+...... ..+..+ ...+..+.|+|+|+. ++...
T Consensus 204 sgs~d-------------~~i~~~d~~~~~~~~~~~~~h-------------~~~~~~~~~~~~g~~-l~s~~------- 249 (420)
T 4gga_A 204 SGSRS-------------GHIHHHDVRVAEHHVATLSGH-------------SQEVCGLRWAPDGRH-LASGG------- 249 (420)
T ss_dssp EEETT-------------SEEEEEETTSSSCEEEEEECC-------------SSCEEEEEECTTSSE-EEEEE-------
T ss_pred EEeCC-------------CceeEeeecccceeeEEeccc-------------ccceeeeeecCCCCe-eeeee-------
Confidence 54332 3577787764322 222111 223457899999997 54433
Q ss_pred ccccCcccceeeccCCCCCCC--CceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeeccc
Q 004475 269 NVEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 345 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 345 (751)
..+.+.+++....... ...........+. ..|+|++..++..... +....|.+.++.++ ..........
T Consensus 250 -----~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~--~~~~~~~~~~ 321 (420)
T 4gga_A 250 -----NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSG--ACLSAVDAHS 321 (420)
T ss_dssp -----TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTT--EEEEEEECSS
T ss_pred -----ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCcc--ccceeecccc
Confidence 2346777776421111 1223334455666 8999998877655422 22346777787774 2222222211
Q ss_pred ccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeee
Q 004475 346 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 425 (751)
Q Consensus 346 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 425 (751)
. +.. ..|+|+++.|+..+. .....|++||..+++....+..... .+..
T Consensus 322 ~-v~~------~~~~~~~~~lv~~sg-------------------~~d~~I~iwd~~~~~~v~~l~gH~~----~V~~-- 369 (420)
T 4gga_A 322 Q-VCS------ILWSPHYKELISGHG-------------------FAQNQLVIWKYPTMAKVAELKGHTS----RVLS-- 369 (420)
T ss_dssp C-EEE------EEEETTTTEEEEEEC-------------------TTTCCEEEEETTTCCEEEEECCCSS----CEEE--
T ss_pred c-eee------eeecCCCCeEEEEEe-------------------cCCCEEEEEECCCCcEEEEEcCCCC----CEEE--
Confidence 1 111 679999999988761 1234799999998876544432111 1222
Q ss_pred cCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 426 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 426 ~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
++|||||+.|+-. ... ..|.++|+.+.
T Consensus 370 -----l~~spdg~~l~S~-s~D---~tvriWdv~~~ 396 (420)
T 4gga_A 370 -----LTMSPDGATVASA-AAD---ETLRLWRCFEL 396 (420)
T ss_dssp -----EEECTTSSCEEEE-ETT---TEEEEECCSCS
T ss_pred -----EEEcCCCCEEEEE-ecC---CeEEEEECCCC
Confidence 5899999977643 332 35777777543
No 327
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.37 E-value=1.6e-10 Score=119.16 Aligned_cols=263 Identities=11% Similarity=0.038 Sum_probs=155.0
Q ss_pred cceeEEeecCCCCCCCCcc---cccCCC-CcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 4 FTGIGIHRLLPDDSLGPEK---EVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~---~l~~~~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
...|.+||+.. ++.. .+..+. ....+....|||||++|+... ....|.+++...+.......
T Consensus 60 D~~i~vWd~~~----~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~----------~d~~i~~~~~~~~~~~~~~~ 125 (340)
T 4aow_A 60 DKTIIMWKLTR----DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS----------WDGTLRLWDLTTGTTTRRFV 125 (340)
T ss_dssp TSCEEEEEECC----SSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCC----CCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc----------ccccceEEeecccceeeeec
Confidence 34689999987 4322 111111 233688899999999998753 33577888877765444433
Q ss_pred CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEE
Q 004475 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (751)
Q Consensus 80 ~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (751)
.... ......|+|+++.|+..+.+ ..+
T Consensus 126 ~~~~----~~~~~~~~~~~~~l~s~s~d-------------------------------------------------~~~ 152 (340)
T 4aow_A 126 GHTK----DVLSVAFSSDNRQIVSGSRD-------------------------------------------------KTI 152 (340)
T ss_dssp CCSS----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCE
T ss_pred CCCC----ceeEEEEeecCccceeecCC-------------------------------------------------CeE
Confidence 2221 24567899999998877442 345
Q ss_pred EEEcCCC-Cc-e-ecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475 160 VLGSLDG-TA-K-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (751)
Q Consensus 160 ~~~~~~G-~~-~-~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (751)
.++++.+ .. . .+..+ ..+...+|++++...++..... ...+.+||..+++......
T Consensus 153 ~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~-----------d~~i~i~d~~~~~~~~~~~--------- 212 (340)
T 4aow_A 153 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW-----------DKLVKVWNLANCKLKTNHI--------- 212 (340)
T ss_dssp EEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET-----------TSCEEEEETTTTEEEEEEC---------
T ss_pred EEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC-----------CCEEEEEECCCCceeeEec---------
Confidence 6667633 21 1 12222 5677888999886544333221 3458899998765543211
Q ss_pred ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEE
Q 004475 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVN 314 (751)
Q Consensus 236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~ 314 (751)
.....+..++|+|||+. |+..+ ..+.|.++++. .............+. +.|+|++..++.
T Consensus 213 ---~h~~~v~~~~~s~~~~~-l~s~s------------~Dg~i~iwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 213 ---GHTGYLNTVTVSPDGSL-CASGG------------KDGQAMLWDLN---EGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp ---CCSSCEEEEEECTTSSE-EEEEE------------TTCEEEEEETT---TTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred ---CCCCcEEEEEECCCCCE-EEEEe------------CCCeEEEEEec---cCceeeeecCCceEEeeecCCCCceeec
Confidence 11233568999999997 55543 23578888875 222222233344556 899999886654
Q ss_pred eeeecccceeEEEecCCCCCCcceeeee--------cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCC
Q 004475 315 ETWYKTSQTRTWLVCPGSKDVAPRVLFD--------RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 386 (751)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~ 386 (751)
+. ...|.+.++.++ .....+.. .....+. .++|+|||++|+..+.+
T Consensus 274 ~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~h~~~v~------~l~~s~dg~~l~sgs~D-------------- 327 (340)
T 4aow_A 274 AT-----GPSIKIWDLEGK-IIVDELKQEVISTSSKAEPPQCT------SLAWSADGQTLFAGYTD-------------- 327 (340)
T ss_dssp EE-----TTEEEEEETTTT-EEEEEECCC-------CCCCCEE------EEEECTTSSEEEEEETT--------------
T ss_pred cC-----CCEEEEEECCCC-eEEEeccccceeeeccCCCCCEE------EEEECCCCCEEEEEeCC--------------
Confidence 43 235666677663 11111110 0111111 17899999998887732
Q ss_pred CCCCCCCceeEEEecCCCc
Q 004475 387 FTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 387 ~~~~~~~~~l~~~d~~~g~ 405 (751)
..|++||+++|+
T Consensus 328 -------g~v~iW~~~tGt 339 (340)
T 4aow_A 328 -------NLVRVWQVTIGT 339 (340)
T ss_dssp -------SCEEEEEEEC--
T ss_pred -------CEEEEEeCCCcC
Confidence 268899998885
No 328
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.36 E-value=2.2e-11 Score=117.95 Aligned_cols=153 Identities=14% Similarity=0.089 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEccCCCCCCCCc---cC--ccc
Q 004475 578 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTP---FG--FQT 647 (751)
Q Consensus 578 ~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~d~~~~~---~~--~~~ 647 (751)
.....+++.++++++.++.. .+++.++||||||.+++.++.++|+ +++.+|++++.++-.... .. ...
T Consensus 76 ~~~~~~~l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~ 153 (249)
T 3fle_A 76 FKENAYWIKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVD 153 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhc
Confidence 34567888899999987643 3589999999999999999998864 799999999876532110 00 000
Q ss_pred ccccchhhHHHHHhcC-cccccCCCCCCEEEEEcC------CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC--CCCc
Q 004475 648 EFRTLWEATNVYIEMS-PITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHV 718 (751)
Q Consensus 648 ~~~~~~~~~~~~~~~~-~~~~~~~~~~P~li~~G~------~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~ 718 (751)
....+......|.+.- ....+++.++|+|.|+|+ .|..|| ...++.+...++......+.++++| +.|.
T Consensus 154 ~~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs 231 (249)
T 3fle_A 154 KQGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHS 231 (249)
T ss_dssp TTCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTG
T ss_pred ccCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchh
Confidence 1111222122333321 122345467899999998 699999 8888888777777666667777766 8898
Q ss_pred CCccccHHHHHHHHHHHH
Q 004475 719 YAARENVMHVIWETDRWL 736 (751)
Q Consensus 719 ~~~~~~~~~~~~~~~~fl 736 (751)
.... ..++.+.+.+||
T Consensus 232 ~l~~--n~~V~~~I~~FL 247 (249)
T 3fle_A 232 QLHE--NKDVANEIIQFL 247 (249)
T ss_dssp GGGG--CHHHHHHHHHHH
T ss_pred cccc--CHHHHHHHHHHh
Confidence 7633 347888888887
No 329
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.2e-10 Score=122.17 Aligned_cols=227 Identities=13% Similarity=0.117 Sum_probs=134.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCC--Cee-eccCCCCccccceeeeeEEecC--CcEEEEeec
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--EAK-PLFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g--~~~-~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~ 106 (751)
.+...+|||||++||... ..+.|.++++.++ +.. .+..... .+..++|+|+ ++.|+..+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCS----------SDKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEE----------CCCcEEEEecCCCcceeeeEecCCCC-----cEEEEEeCCCCCCCEEEEecc
Confidence 588899999999998863 2245566666533 332 2222221 4778999987 888887744
Q ss_pred CCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC---ceecCCC-ceEEeee
Q 004475 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVE 181 (751)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~---~~~lt~~-~~~~~~~ 181 (751)
+ ..|.++++ +++ ...+..+ ..+..++
T Consensus 78 d-------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 78 D-------------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp T-------------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred C-------------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 2 35667777 553 3334434 7788999
Q ss_pred eCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec--------
Q 004475 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-------- 251 (751)
Q Consensus 182 ~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-------- 251 (751)
|+|+ |+.|+....+ ..+.+||+.+........ +......+..+.|+|
T Consensus 109 ~~~~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPII----------IDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp ECCGGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEE----------EECCTTCEEEEEECCCC------
T ss_pred eCCCCCCCEEEEecCC-------------CcEEEEecCCCCceeeEE----------ecCCCCceEEEEEcCcccccccc
Confidence 9999 8888876543 368899987653211100 111223456889999
Q ss_pred -----CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc----eEeEeeceeEE-EEEecC---CceEEEeeee
Q 004475 252 -----DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP----EILHKLDLRFS-VSWCDD---SLALVNETWY 318 (751)
Q Consensus 252 -----dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~l~~~~~~~~-~~~spd---g~~l~~~~~~ 318 (751)
|++. ++... ..+.|+++++.. +... ..+......+. +.|+|+ ++.|+....
T Consensus 166 ~~~~~~~~~-l~~~~------------~dg~i~i~d~~~--~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~- 229 (379)
T 3jrp_A 166 HNGTKESRK-FVTGG------------ADNLVKIWKYNS--DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ- 229 (379)
T ss_dssp ----CTTCE-EEEEE------------TTSCEEEEEEET--TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-
T ss_pred ccCCCCCCE-EEEEe------------CCCeEEEEEecC--CCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-
Confidence 6776 55543 235788888741 1111 12223455667 999999 787776552
Q ss_pred cccceeEEEecCCCCCCc-ceeeeec--ccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 319 KTSQTRTWLVCPGSKDVA-PRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~-~~~l~~~--~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.+ .|.++++.++... ...+... ....+.. ++|+|||+.|+..+
T Consensus 230 -dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 230 -DR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 275 (379)
T ss_dssp -TS--CEEEEEESSTTSCCEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred -CC--EEEEEeCCCCCccceeeeeccccCCCcEEE------EEEcCCCCEEEEec
Confidence 23 3444444443111 1122211 1111222 78999999998877
No 330
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.36 E-value=1.1e-11 Score=126.41 Aligned_cols=203 Identities=16% Similarity=0.077 Sum_probs=121.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.||++||.+.. +....| ..+...| ..||.|++ ++.+|+|.+...........+++.+.++.
T Consensus 81 ~~~lv~lhG~~~~---------~~~~~~----~~~~~~L-~~~~~v~~---~d~~G~G~~~~~~~~~~~~~~~~~~~l~~ 143 (319)
T 3lcr_A 81 GPQLILVCPTVMT---------TGPQVY----SRLAEEL-DAGRRVSA---LVPPGFHGGQALPATLTVLVRSLADVVQA 143 (319)
T ss_dssp SCEEEEECCSSTT---------CSGGGG----HHHHHHH-CTTSEEEE---EECTTSSTTCCEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcC---------CCHHHH----HHHHHHh-CCCceEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5889999993100 010111 1233344 78999999 56667776554444456666666666655
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCC-cc-Cccccc-cc--------------
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLT-PF-GFQTEF-RT-------------- 651 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~d~~~~-~~-~~~~~~-~~-------------- 651 (751)
+.. ..++.|+||||||.+|+.+|.+. |++++++|++++....... .. .+.... ..
T Consensus 144 ~~~-----~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (319)
T 3lcr_A 144 EVA-----DGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNL 218 (319)
T ss_dssp HHT-----TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_pred hcC-----CCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCch
Confidence 432 25799999999999999999887 7889999998875432210 00 000000 00
Q ss_pred --chhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475 652 --LWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 729 (751)
Q Consensus 652 --~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (751)
.......+...........+++|+|+++|++| .++ +.....+.+.+.. .++++++++..|.+...+....+.
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~~-~~~--~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va 292 (319)
T 3lcr_A 219 SQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQP-LVE--QEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTA 292 (319)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESSC-SSS--CCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCCC-CCC--cccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHH
Confidence 00000001111111122578899999999984 454 4555666665553 357888887544443335788999
Q ss_pred HHHHHHHHHHhcC
Q 004475 730 WETDRWLQKYCLS 742 (751)
Q Consensus 730 ~~~~~fl~~~l~~ 742 (751)
+.+.+||.+....
T Consensus 293 ~~i~~fL~~~~~~ 305 (319)
T 3lcr_A 293 HIVGDWLREAHAH 305 (319)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHhcccc
Confidence 9999999987643
No 331
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.36 E-value=4.4e-10 Score=116.77 Aligned_cols=303 Identities=14% Similarity=0.073 Sum_probs=155.1
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCCCcc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDIC 84 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~~~~ 84 (751)
.|+++|+.+ ++.... ++.+... ..++||||++|+.+.........++....|.++|+++++... +.-.....
T Consensus 32 ~v~v~D~~t----~~~~~~--i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 32 RVHVYDYTN----GKFLGM--VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp EEEEEETTT----CCEEEE--EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred eEEEEECCC----CeEEEE--ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 678888877 776543 2344334 889999999987765311000111234578999998876433 32111100
Q ss_pred -ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 85 -LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 85 -~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.......+++||||++|+..... ....|.++|
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~-----------------------------------------------~~~~v~v~d 137 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNAS-----------------------------------------------PATSIGIVD 137 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEES-----------------------------------------------SSEEEEEEE
T ss_pred ccCCCcceEEECCCCCEEEEECCC-----------------------------------------------CCCeEEEEE
Confidence 00013577999999999887321 014678888
Q ss_pred C-CCCc-ee-cCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC-ceeeeeccCCCCCCCCCccCC
Q 004475 164 L-DGTA-KD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 164 ~-~G~~-~~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~~~~ 239 (751)
+ +++. .. +.- .....+.+.|+|+..++.... ...+..++.+. ++........ ..+.
T Consensus 138 ~~~~~~~~~~i~~-~~~~~v~~~p~~~~~~~~~~~------------dg~~~~v~~~~~g~~~~~~~~~------~~~~- 197 (361)
T 2oiz_A 138 VAKGDYVEDVTAA-AGCWSVIPQPNRPRSFMTICG------------DGGLLTINLGEDGKVASQSRSK------QMFS- 197 (361)
T ss_dssp TTTTEEEEEEGGG-TTEEEEEECTTSSSEEEEEET------------TSSEEEEEECTTSSEEEEEECC------CCSC-
T ss_pred CCCCcEEEEEecC-CCcceeEEcCCCCeeEEEECC------------CCcEEEEEECCCCcEeeecccc------ceEc-
Confidence 8 5533 33 321 222224456666443333222 11233333321 2111000000 0000
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-------------eceeEE-EEE
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------------LDLRFS-VSW 305 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------------~~~~~~-~~~ 305 (751)
.......+.++|||+. +++.+ ..+.++++++. +.....+.. ...... +++
T Consensus 198 ~~~~~~~~~~~~~g~~-~~~~~------------~~~~v~v~d~~---~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 198 VKDDPIFIAPALDKDK-AHFVS------------YYGNVYSADFS---GDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TTTSCBCSCCEECSSE-EEEEB------------TTSEEEEEECS---SSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCCCceEEEecccCCE-EEEEe------------CCCeEEEEEec---CCCceecccccccCccccccccccCCeeEEEE
Confidence 0011224466899887 56643 22468888874 222222111 011112 588
Q ss_pred ecCCceEEEeeeec-------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcce
Q 004475 306 CDDSLALVNETWYK-------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 378 (751)
Q Consensus 306 spdg~~l~~~~~~~-------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 378 (751)
+|||+.++...... .....|+++|+.+. .....+.... .+. ++|||||++|+...
T Consensus 262 ~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~---p~~------ia~spdg~~l~v~n-------- 323 (361)
T 2oiz_A 262 HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD---ALS------MTIDQQRNLMLTLD-------- 323 (361)
T ss_dssp ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT---CCE------EEEETTTTEEEEEC--------
T ss_pred ecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC---eeE------EEECCCCCEEEEeC--------
Confidence 99999877654211 12358999999885 1112222222 222 88999999776443
Q ss_pred EEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCE
Q 004475 379 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLK 439 (751)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 439 (751)
. ..|.+||+++++++.+-.... .-..+..++++|||++
T Consensus 324 -------------~-~~v~v~D~~t~~l~~~~~i~~---------~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 324 -------------G-GNVNVYDISQPEPKLLRTIEG---------AAEASLQVQFHPVGGT 361 (361)
T ss_dssp -------------S-SCEEEEECSSSSCEEEEEETT---------SCSSEEEEEECCCSCC
T ss_pred -------------C-CeEEEEECCCCcceeeEEecc---------CCCCcEEEEecCCCCC
Confidence 1 478999999983333322100 0011233588999863
No 332
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.36 E-value=1.8e-09 Score=112.34 Aligned_cols=307 Identities=10% Similarity=0.020 Sum_probs=157.5
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 115 (751)
...+|||++ +|+.+.. ..+....|+++|+++++...-..... .- .+++||||++|++.........
T Consensus 26 ~~~~~~~~~-~yv~~~~----~~~~~~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spDg~~lyv~n~~~~~~~--- 91 (373)
T 2mad_H 26 EAPGADGRR-SYINLPA----HHSAIIQQWVLDAGSGSILGHVNGGF-----LP-NPVAAHSGSEFALASTSFSRIA--- 91 (373)
T ss_pred ccCCCCCCE-EEEeCCc----ccCCccEEEEEECCCCeEEEEecCCC-----CC-CeEECCCCCEEEEEeccccccc---
Confidence 345589966 5654310 00111188999999887543221111 12 7799999999998843100000
Q ss_pred CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCC--------CceEEeeeeCCC
Q 004475 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT--------PAVYTAVEPSPD 185 (751)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~--------~~~~~~~~~SpD 185 (751)
.+ .....|.++|. +++. ..+.- ......+.||||
T Consensus 92 -------------rg-----------------------~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 92 -------------KG-----------------------KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred -------------cC-----------------------CCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC
Confidence 00 00135667777 4432 22211 112347899999
Q ss_pred CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee-ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
|++|++..... ...|.++| ++++.... ...+. .+.+.|+|++ .+++..
T Consensus 136 G~~l~v~n~~~-----------~~~v~viD-~t~~~~~~~i~~~~----------------~~~~~~~~~~-~~~~~~-- 184 (373)
T 2mad_H 136 NADLLFFQFAA-----------GPAVGLVV-QGGSSDDQLLSSPT----------------CYHIHPGAPS-TFYLLC-- 184 (373)
T ss_pred CCEEEEEecCC-----------CCeEEEEE-CCCCEEeEEcCCCc----------------eEEEEeCCCc-eEEEEc--
Confidence 99999975321 24688999 87755422 22211 2345566665 333221
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEe------EeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcc
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEIL------HKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 337 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l------~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 337 (751)
..+.+..++.. +.....+ ........ +.+++++..++|.+. ...++++|..+. ..
T Consensus 185 ---------~dg~~~~vd~~---g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~v~vid~~~~--~~ 246 (373)
T 2mad_H 185 ---------AQGGLAKTDHA---GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY----SGKILQADISAA--GA 246 (373)
T ss_pred ---------CCCCEEEEECC---CcEEEEEeccccccCCcceeecceeEecCCEEEEEcC----CceEEEEeccCC--cc
Confidence 11233334331 2111111 11111123 678888888877662 247999998764 22
Q ss_pred eeeeecccc--cccC---CC-CCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 338 RVLFDRVFE--NVYS---DP-GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 338 ~~l~~~~~~--~~~~---~~-~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
+.+...... .... .+ +...++++|||+.|+..... +...+.......|+++|+++++...-+.
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~-----------~~~~~~~~~~~~V~VID~~t~~vv~~i~ 315 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE-----------QSAWKLHAAAKEVTSVTGLVGQTSSQIS 315 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEecc-----------CCcccccCCCCeEEEEECCCCEEEEEEE
Confidence 222211100 0000 00 00114466666666554421 0000111123579999999887744333
Q ss_pred ccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475 412 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 466 (751)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l 466 (751)
... .+..++|||||++++|+.... ...++++|+.+++....
T Consensus 316 ~g~------------~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 316 LGH------------DVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCC------------CcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCCCEEee
Confidence 221 234468999999766664322 35799999999876643
No 333
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.36 E-value=1e-09 Score=120.08 Aligned_cols=325 Identities=10% Similarity=-0.022 Sum_probs=180.5
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcC--CCCe-eeccCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEA-KPLFESP 81 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~--~g~~-~~lt~~~ 81 (751)
..|.++|+.+ ++..... +.+.....+.+||||++++... ....|.++|+. +++. ..+..+.
T Consensus 177 ~~V~viD~~t----~~v~~~i--~~g~~p~~v~~SpDGr~lyv~~----------~dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 177 GQIALIDGST----YEIKTVL--DTGYAVHISRLSASGRYLFVIG----------RDGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp TEEEEEETTT----CCEEEEE--ECSSCEEEEEECTTSCEEEEEE----------TTSEEEEEETTSSSCCEEEEEECCS
T ss_pred CeEEEEECCC----CeEEEEE--eCCCCccceEECCCCCEEEEEc----------CCCeEEEEECCCCCCcEeEEEecCC
Confidence 3688999988 8766432 3333456889999999876542 23579999985 5542 2332111
Q ss_pred CccccceeeeeEEe----cCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheee
Q 004475 82 DICLNAVFGSFVWV----NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (751)
Q Consensus 82 ~~~~~~~~~~~~ws----pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (751)
....+++| |||++|+..... ..
T Consensus 241 ------~P~~ia~s~~~~pDGk~l~v~n~~------------------------------------------------~~ 266 (567)
T 1qks_A 241 ------EARSIETSKMEGWEDKYAIAGAYW------------------------------------------------PP 266 (567)
T ss_dssp ------EEEEEEECCSTTCTTTEEEEEEEE------------------------------------------------TT
T ss_pred ------CCceeEEccccCCCCCEEEEEEcc------------------------------------------------CC
Confidence 23578999 799999887432 13
Q ss_pred EEEEEcC-CCCcee-cCCC------------ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee
Q 004475 158 QLVLGSL-DGTAKD-FGTP------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (751)
Q Consensus 158 ~l~~~~~-~G~~~~-lt~~------------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 223 (751)
++.++|. +.+... +.-. ..+..+..|+++..+++.... ...|+++|....+...
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLK 334 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCccce
Confidence 5666666 443222 1100 134567788988877665432 4578888876543222
Q ss_pred eccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee--cee-
Q 004475 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLR- 300 (751)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~~~- 300 (751)
++..+. ......+.|+|||++ ++.+.. ..+.|.++|++ .......... ...
T Consensus 335 v~~i~~-----------~~~~~d~~~~pdgr~-~~va~~-----------~sn~V~ViD~~---t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 335 TTEISA-----------ERFLHDGGLDGSHRY-FITAAN-----------ARNKLVVIDTK---EGKLVAIEDTGGQTPH 388 (567)
T ss_dssp EEEEEC-----------CSSEEEEEECTTSCE-EEEEEG-----------GGTEEEEEETT---TTEEEEEEECSSSSBC
T ss_pred eeeeec-----------cccccCceECCCCCE-EEEEeC-----------CCCeEEEEECC---CCcEEEEEeccCcCCC
Confidence 211111 112346799999998 555431 23578888885 2222221121 111
Q ss_pred E-E-EE-EecCCceEEEeeeecccceeEEEecCCCCCC---cceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecC
Q 004475 301 F-S-VS-WCDDSLALVNETWYKTSQTRTWLVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 374 (751)
Q Consensus 301 ~-~-~~-~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 374 (751)
. . +. ++|++..++++.+.. ...|-+++.+.... ..+.+....... .+...+..+|||++|+.....
T Consensus 389 pg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~~~~~~~~~kvv~~i~~~g----~g~~~i~~~p~~~~l~v~~~~-- 460 (567)
T 1qks_A 389 PGRGANFVHPTFGPVWATSHMG--DDSVALIGTDPEGHPDNAWKILDSFPALG----GGSLFIKTHPNSQYLYVDATL-- 460 (567)
T ss_dssp CTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCSEEEEECTT--
T ss_pred CccceeeECCCCCcEEEeCCCC--CCeEEEecCCCCCCccccCEEEEEEecCC----CCCEEEEeCCCCCeEEEecCC--
Confidence 1 1 33 478888776655322 24577777765311 012222111111 111226689999998775511
Q ss_pred CcceEEEEccCCCCCC-CCCceeEEEecCCC-----ce--eEEeeccchhh---hhceeeeecCCcceeeccCCCEEEEE
Q 004475 375 DEQIYILLNGRGFTPE-GNIPFLDLFDINTG-----SK--ERIWESNREKY---FETAVALVFGQGEEDINLNQLKILTS 443 (751)
Q Consensus 375 ~~~~~~~~~~~~~~~~-~~~~~l~~~d~~~g-----~~--~~l~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~ 443 (751)
.++ .....|.++|.++. .. ..+.-.++... -.++. .+.|++||++++++
T Consensus 461 -------------~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~G~~~~~s 520 (567)
T 1qks_A 461 -------------NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV-------QGEFNKDGTEVWFS 520 (567)
T ss_dssp -------------CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE-------EEEECTTSSEEEEE
T ss_pred -------------CCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE-------eeeECCCCCEEEEE
Confidence 010 01237888898766 21 22211100000 00112 25899999999998
Q ss_pred EecC-CCCCeEEEEEcCCCceeE
Q 004475 444 KESK-TEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 444 ~~~~-~~~~~l~~~~~~~g~~~~ 465 (751)
.++. .....|.++|..++++..
T Consensus 521 ~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 521 VWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EECCTTSCCEEEEEETTTTEEEE
T ss_pred eecCCCCCCcEEEEECCCceEEE
Confidence 7653 346789999998887653
No 334
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.35 E-value=1.7e-10 Score=120.27 Aligned_cols=267 Identities=12% Similarity=0.091 Sum_probs=151.0
Q ss_pred ccccceeecCC---CCeEEEEEeecccccccCCceeEEEEEcCC-CCe--eeccCCCCccccceeeeeEEecCCcEEEEe
Q 004475 31 AKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (751)
Q Consensus 31 ~~~~~p~~SPD---G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~-g~~--~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 104 (751)
..+...+|||| |++|+... ..+.|.++++.+ ++. +.+..... .+..++|+|||++|+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGS----------WANDVRCWEVQDSGQTIPKAQQMHTG-----PVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEE----------TTSEEEEEEECTTSCEEEEEEEECSS-----CEEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEEC----------CCCcEEEEEcCCCCceeEEEeccccC-----CEEEEEECcCCCEEEEE
Confidence 36899999999 68888753 335677777776 433 23322222 47789999999999877
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeee
Q 004475 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEP 182 (751)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~ 182 (751)
+.+ ..|.++++ +++...+..+ ..+..+.|
T Consensus 105 ~~d-------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 105 SCD-------------------------------------------------KTAKMWDLSSNQAIQIAQHDAPVKTIHW 135 (368)
T ss_dssp ETT-------------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred cCC-------------------------------------------------CcEEEEEcCCCCceeeccccCceEEEEE
Confidence 432 47888888 6655555444 77889999
Q ss_pred --CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEE
Q 004475 183 --SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (751)
Q Consensus 183 --SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~ 260 (751)
+|||+.|+....+ ..+.+||+.+++......... ....+.+.+.. ++..
T Consensus 136 ~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~ 186 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWD-------------KTLKFWDTRSSNPMMVLQLPE---------------RCYCADVIYPM-AVVA 186 (368)
T ss_dssp EECSSCEEEEEEETT-------------SEEEEECSSCSSCSEEEECSS---------------CEEEEEEETTE-EEEE
T ss_pred EeCCCCCEEEEccCC-------------CcEEEEECCCCcEEEEEecCC---------------CceEEEecCCe-eEEE
Confidence 9999988876543 368899998665433222111 12233444444 3433
Q ss_pred EeccCCCCccccCcccceeeccCCCCCCCCceEeEe-eceeEE-EEEecCCce----EEEeeeecccceeEEEecCCCCC
Q 004475 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFS-VSWCDDSLA----LVNETWYKTSQTRTWLVCPGSKD 334 (751)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~~~~~~-~~~spdg~~----l~~~~~~~~~~~~l~~~~~~~~~ 334 (751)
. ..+.+.++++... ......+.. ...... ..+.+++.. ++... .. ..|.+.+.....
T Consensus 187 ~------------~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d--g~i~i~~~~~~~ 249 (368)
T 3mmy_A 187 T------------AERGLIVYQLENQ-PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IE--GRVAIHYINPPN 249 (368)
T ss_dssp E------------GGGCEEEEECSSS-CEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TT--SEEEEEESSCSC
T ss_pred e------------CCCcEEEEEeccc-cchhhhccccccCCCceEEEcccCCCCCCeEEEec--CC--CcEEEEecCCCC
Confidence 2 2246667766411 111111111 112223 444444443 54443 22 344445554431
Q ss_pred C-cceeeeecccc------------cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec
Q 004475 335 V-APRVLFDRVFE------------NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 401 (751)
Q Consensus 335 ~-~~~~l~~~~~~------------~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 401 (751)
. ........... .+.. ++|+|||++|+..+.+ ..|++||+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~sp~~~~l~s~~~d---------------------g~i~iwd~ 302 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNG------IAFHPVHGTLATVGSD---------------------GRFSFWDK 302 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEE------EEECTTTCCEEEEETT---------------------SCEEEEET
T ss_pred ccccceeeeeeecccccccccccccceEE------EEEecCCCEEEEEccC---------------------CeEEEEEC
Confidence 1 11111111111 1222 7899999999887732 26999999
Q ss_pred CCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEe
Q 004475 402 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 445 (751)
Q Consensus 402 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 445 (751)
.+++.......... .+ ..++|||||+.|+....
T Consensus 303 ~~~~~~~~~~~~~~----~v-------~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 303 DARTKLKTSEQLDQ----PI-------SACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTTEEEEECCCCSS----CE-------EEEEECTTSSCEEEEEC
T ss_pred CCCcEEEEecCCCC----Cc-------eEEEECCCCCeEEEEec
Confidence 98876544332111 12 22589999998887753
No 335
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.35 E-value=2.7e-10 Score=128.15 Aligned_cols=224 Identities=11% Similarity=0.038 Sum_probs=139.7
Q ss_pred ceeEEeecCCCCCCC----Ccc-cccCCCCccc-ccceeecC--CCCeEEEEEeecccccccCCceeEEEEEcCCC----
Q 004475 5 TGIGIHRLLPDDSLG----PEK-EVHGYPDGAK-INFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETG---- 72 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g----~~~-~l~~~~~~~~-~~~p~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g---- 72 (751)
..|.+|++.+ + +.. .+. ..... +...+||| ||++||... ..+.|.++++.++
T Consensus 39 ~~v~v~~~~~----~~~~~~~~~~~~--~h~~~~v~~~~~sp~~~~~~l~s~~----------~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 39 KSAFVRCLDD----GDSKVPPVVQFT--GHGSSVVTTVKFSPIKGSQYLCSGD----------ESGKVIVWGWTFDKESN 102 (615)
T ss_dssp TEEEEEECCS----SCCSSCSEEEEC--TTTTSCEEEEEECSSTTCCEEEEEE----------TTSEEEEEEEEEEGGGT
T ss_pred CeEEEEECCC----CCCccccceEEe--cCCCceEEEEEECcCCCCCEEEEec----------CCCEEEEEeCCCCcccc
Confidence 3689999987 6 333 333 22335 78999999 999999864 2356777777554
Q ss_pred --CeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhh
Q 004475 73 --EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESL 150 (751)
Q Consensus 73 --~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (751)
+.+.+.....+ ...+..++|+|||++|+....+...
T Consensus 103 ~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~~---------------------------------------- 140 (615)
T 1pgu_A 103 SVEVNVKSEFQVL--AGPISDISWDFEGRRLCVVGEGRDN---------------------------------------- 140 (615)
T ss_dssp EEEEEEEEEEECC--SSCEEEEEECTTSSEEEEEECCSSC----------------------------------------
T ss_pred cccccccchhhcc--cccEEEEEEeCCCCEEEEeccCCCC----------------------------------------
Confidence 22222111111 1147789999999999988543211
Q ss_pred hhhheeeEEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCC
Q 004475 151 FDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLP 228 (751)
Q Consensus 151 ~~~~~~~~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~ 228 (751)
...|++++.......+..+ ..+..++|+|||+.++++... ...+.+||..+++... +..+.
T Consensus 141 -----~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 141 -----FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD------------DGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp -----SEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET------------TTEEEEEETTTBEEEEEECSSS
T ss_pred -----ccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeC------------CCcEEEEeCCCcceeeeecccC
Confidence 1578888843344555555 778899999999955554433 3468899988765432 21111
Q ss_pred CCCCCCCccCCccCCCceeeeecC-CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe-E---eeceeEE-
Q 004475 229 PAEDIPVCYNSVREGMRSISWRAD-KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-H---KLDLRFS- 302 (751)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~spd-G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-~---~~~~~~~- 302 (751)
. ....+..++|+|| |+. ++... ..+.|+++++.. +.....+ . .....+.
T Consensus 204 ~----------~~~~v~~~~~~~~~~~~-l~~~~------------~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 204 K----------QGSFVRDVEFSPDSGEF-VITVG------------SDRKISCFDGKS--GEFLKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp C----------TTCCEEEEEECSTTCCE-EEEEE------------TTCCEEEEETTT--CCEEEECCBTTBCCCSCEEE
T ss_pred C----------CCceEEEEEECCCCCCE-EEEEe------------CCCeEEEEECCC--CCEeEEecccccccCCceEE
Confidence 1 0013668999999 887 55543 235788888751 2223333 2 4455666
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
+.|+ +++.|+.... ...|.+.++.++
T Consensus 259 ~~~~-~~~~l~~~~~----d~~i~~wd~~~~ 284 (615)
T 1pgu_A 259 LSWL-DSQKFATVGA----DATIRVWDVTTS 284 (615)
T ss_dssp EEES-SSSEEEEEET----TSEEEEEETTTT
T ss_pred EEEc-CCCEEEEEcC----CCcEEEEECCCC
Confidence 8999 9998877652 245667777664
No 336
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.35 E-value=1.2e-10 Score=122.37 Aligned_cols=258 Identities=11% Similarity=0.025 Sum_probs=149.5
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--------e
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--------K 75 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--------~ 75 (751)
...|.+||+.+ ++...... .....+...+|||||++||... ....+.++++.++.. +
T Consensus 87 D~~v~iWd~~~----~~~~~~~~-~h~~~v~~~~~s~~g~~las~~----------~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 87 DGRLIVWNALT----SQKTHAIK-LHCPWVMECAFAPNGQSVACGG----------LDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp TSEEEEEETTT----TEEEEEEE-CCCTTCCCCEECTTSSEEEECC----------SSSCCEEEECCCCSSCCCSSTTCC
T ss_pred CCeEEEEECCC----CccceEEe-cCCCCEEEEEECCCCCEEEEee----------CCCcEEEEECCCCccccCCcccee
Confidence 45799999988 66554321 1233578899999999998853 234455555543221 1
Q ss_pred eccCCCCccccceeeeeEEecCCc-EEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhh
Q 004475 76 PLFESPDICLNAVFGSFVWVNNST-LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (751)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (751)
.++... ..+..+.|+|++. .|+..+.+
T Consensus 152 ~~~gh~-----~~v~~~~~~~~~~~~l~s~s~D----------------------------------------------- 179 (380)
T 3iz6_a 152 VLTGHK-----GYASSCQYVPDQETRLITGSGD----------------------------------------------- 179 (380)
T ss_dssp BCCCCS-----SCCCCCBCCSSSSSCEEEECTT-----------------------------------------------
T ss_pred eccCCC-----cceEEEEEecCCCCEEEEECCC-----------------------------------------------
Confidence 121111 1356778999865 45554322
Q ss_pred eeeEEEEEcC-CCCce-ec-----CCC-ceEEeeeeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCC-ce-eee
Q 004475 155 TTAQLVLGSL-DGTAK-DF-----GTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KL-VRE 223 (751)
Q Consensus 155 ~~~~l~~~~~-~G~~~-~l-----t~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~-~~~ 223 (751)
..|.++|+ +|+.. .+ ..+ ..+..+.|+| |++.|+..+.+ ..+.+||+.. +. .+.
T Consensus 180 --~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-------------~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 180 --QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-------------TTVRLWDLRITSRAVRT 244 (380)
T ss_dssp --SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------------SCEEEEETTTTCCCCEE
T ss_pred --CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------------CeEEEEECCCCCcceEE
Confidence 46777788 66432 22 122 5677888877 77777655433 3688999863 22 222
Q ss_pred eccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE-eEee-----
Q 004475 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL----- 297 (751)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~~----- 297 (751)
+.. ....+..++|+|||+. ++..+ ..+.|.++++. .+.... +...
T Consensus 245 ~~~-------------h~~~v~~v~~~p~~~~-l~s~s------------~D~~i~lwd~~---~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 245 YHG-------------HEGDINSVKFFPDGQR-FGTGS------------DDGTCRLFDMR---TGHQLQVYNREPDRND 295 (380)
T ss_dssp ECC-------------CSSCCCEEEECTTSSE-EEEEC------------SSSCEEEEETT---TTEEEEEECCCCSSSC
T ss_pred ECC-------------cCCCeEEEEEecCCCe-EEEEc------------CCCeEEEEECC---CCcEEEEecccccccc
Confidence 211 2234668999999997 55543 23567788774 222111 1111
Q ss_pred --ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee---ecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 298 --DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF---DRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 298 --~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
...+. ++|||+|+.|+.... ...|++.|...+ .....+. ......+.. ++|||||+.|+..+.
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~----dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYS----NGDCYVWDTLLA-EMVLNLGTLQNSHEGRISC------LGLSSDGSALCTGSW 364 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECT----TSCEEEEETTTC-CEEEEECCSCSSCCCCCCE------EEECSSSSEEEEECT
T ss_pred cccCceEEEEECCCCCEEEEEEC----CCCEEEEECCCC-ceEEEEecccCCCCCceEE------EEECCCCCEEEEeeC
Confidence 01234 899999998887552 346777777654 1111221 111112222 789999999888773
Q ss_pred ecCCcceEEEEccCCCCCCCCCceeEEEecCCC
Q 004475 372 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 404 (751)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 404 (751)
+ ..|.+|++.++
T Consensus 365 D---------------------~~i~iW~~~~~ 376 (380)
T 3iz6_a 365 D---------------------KNLKIWAFSGH 376 (380)
T ss_dssp T---------------------SCEEEEECCSS
T ss_pred C---------------------CCEEEEecCCC
Confidence 3 26888888754
No 337
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.34 E-value=5.5e-13 Score=143.30 Aligned_cols=211 Identities=18% Similarity=0.090 Sum_probs=131.7
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC-eEEEEcCCC-CCCCCCC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGEGD 570 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~~~~-~~~g~g~ 570 (751)
-+...+|.|... ..++|+||++|||||..++.. ... .....|+++| ++|+.++|+ +..|++.
T Consensus 82 cL~l~v~~P~~~----~~~~PviV~iHGGg~~~g~~~--------~~~----~~~~~la~~g~~vvv~~nYRlg~~Gf~~ 145 (489)
T 1qe3_A 82 CLYVNVFAPDTP----SQNLPVMVWIHGGAFYLGAGS--------EPL----YDGSKLAAQGEVIVVTLNYRLGPFGFLH 145 (489)
T ss_dssp CCEEEEEEECSS----CCSEEEEEEECCSTTTSCCTT--------SGG----GCCHHHHHHHTCEEEEECCCCHHHHSCC
T ss_pred CCEEEEEeCCCC----CCCCCEEEEECCCccccCCCC--------Ccc----cCHHHHHhcCCEEEEecCccCcccccCc
Confidence 467778888652 124899999999987543321 110 1134566665 999998886 2234433
Q ss_pred CCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCCCCCCcc
Q 004475 571 KLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPF 643 (751)
Q Consensus 571 ~~~--~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d~~~~~~ 643 (751)
... ........+.|+..+++|+++.. ..|+++|.|+|+|+||++++.++... ++.|+++|+.+|..+......
T Consensus 146 ~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~ 225 (489)
T 1qe3_A 146 LSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQ 225 (489)
T ss_dssp CTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHH
T ss_pred cccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHH
Confidence 211 01112234788899999998752 35899999999999999998887653 568999999999763211000
Q ss_pred C------cccccccchhhHHH---------HHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 004475 644 G------FQTEFRTLWEATNV---------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 708 (751)
Q Consensus 644 ~------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~ 708 (751)
. +....+......+. +...+++.+......|.+++++..|..+. +.+..+++++.+..++++.
T Consensus 226 ~~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~ 303 (489)
T 1qe3_A 226 AASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLL 303 (489)
T ss_dssp HHHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEE
Confidence 0 00000000000111 11111111111234557788999998887 7888888887777889999
Q ss_pred EEEeCCCCCcCCc
Q 004475 709 LVLLPFEHHVYAA 721 (751)
Q Consensus 709 ~~~~~~~~H~~~~ 721 (751)
+-..++++|.+..
T Consensus 304 ~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 304 IGTTRDEGYLFFT 316 (489)
T ss_dssp EEEETTGGGGTCC
T ss_pred EeeecchhHhhcc
Confidence 9999999998754
No 338
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.33 E-value=2.3e-11 Score=119.59 Aligned_cols=156 Identities=15% Similarity=0.064 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEccCCCCCCCCccC---ccc-
Q 004475 577 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTPFG---FQT- 647 (751)
Q Consensus 577 ~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~d~~~~~~~---~~~- 647 (751)
......+++..+++.+.++..+ .++.++||||||.+++.++.++|+ +++++|++++.++....... ...
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~ 149 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFK 149 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccc
Confidence 3566788888889998876433 689999999999999999999988 89999999987663211000 000
Q ss_pred ccccchhhHHHHHhcCcccccCCCCCCEEEEEcC------CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC--CCCcC
Q 004475 648 EFRTLWEATNVYIEMSPITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHVY 719 (751)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~------~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~ 719 (751)
...........+... ...+.+ ++|+|.|+|. .|.+|| ...++.+...+.......+..++.+ ++|..
T Consensus 150 ~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~ 224 (254)
T 3ds8_A 150 KLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDAVHQT 224 (254)
T ss_dssp SCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGGCGGG
T ss_pred cCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCCchhc
Confidence 000001111111111 112222 6899999999 999999 8888877776665544566666766 66886
Q ss_pred CccccHHHHHHHHHHHHHHHhc
Q 004475 720 AARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 720 ~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
.. ++ .++.+.+..||.+...
T Consensus 225 l~-~~-~~v~~~i~~fL~~~~~ 244 (254)
T 3ds8_A 225 LH-ET-PKSIEKTYWFLEKFKT 244 (254)
T ss_dssp GG-GS-HHHHHHHHHHHHTCCC
T ss_pred cc-CC-HHHHHHHHHHHHHhcC
Confidence 53 33 3588899999988754
No 339
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=2.2e-10 Score=119.64 Aligned_cols=175 Identities=11% Similarity=0.077 Sum_probs=89.4
Q ss_pred CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-----ceeEE-EEEecCCceEEEeee
Q 004475 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRFS-VSWCDDSLALVNETW 317 (751)
Q Consensus 244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-----~~~~~-~~~spdg~~l~~~~~ 317 (751)
+..++|||||++ ++.+.. ..+.|+++++++ ++ ....+... ..... ++|||||++|+....
T Consensus 147 ~~~~~~spdG~~-l~~~~~-----------~~~~v~~~~~~~-~g-~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 147 IHGMVFDPTETY-LYSADL-----------TANKLWTHRKLA-SG-EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEECTTSSE-EEEEET-----------TTTEEEEEEECT-TS-CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred ceEEEECCCCCE-EEEEcC-----------CCCEEEEEEECC-CC-CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 457899999998 655431 124788888742 22 33222221 22345 899999998877653
Q ss_pred ecccceeEEEecCCCCCCcc--eeeeecccccccCCC-------CCCCee-eCCCCCEEEEeeeecCCcceEEEEccCCC
Q 004475 318 YKTSQTRTWLVCPGSKDVAP--RVLFDRVFENVYSDP-------GSPMMT-RTSTGTNVIAKIKKENDEQIYILLNGRGF 387 (751)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~~~--~~l~~~~~~~~~~~~-------~~~~~~-~spDG~~l~~~~~~~~~~~~~~~~~~~~~ 387 (751)
. +..-.+|.++..++.... ..+...... ..... ....++ |||||++|+......+
T Consensus 213 ~-~~~v~v~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~------------- 277 (365)
T 1jof_A 213 A-GNRICEYVIDPATHMPVYTHHSFPLIPPG-IPDRDPETGKGLYRADVCALTFSGKYMFASSRANK------------- 277 (365)
T ss_dssp T-TTEEEEEEECTTTCCEEEEEEEEESSCTT-CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS-------------
T ss_pred C-CCeEEEEEEeCCCCcEEEccceEEcCCCC-cCCcccccccccccccEEEECCCCCEEEEECCCCC-------------
Confidence 2 233456666665531110 111111000 00000 011278 9999998876552210
Q ss_pred CCCCCCceeEEEecC-CCceeEEee-ccchhhhhceeeeecCCcceeecc---CCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 388 TPEGNIPFLDLFDIN-TGSKERIWE-SNREKYFETAVALVFGQGEEDINL---NQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 388 ~~~~~~~~l~~~d~~-~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~s~---dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
......|.+|+++ +|+...+.. ... ....+..++||| ||++|++.... ...+.+++++..
T Consensus 278 --~~~~~~i~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~a~sp~~~dg~~l~v~~~~---~~~v~v~~~~~~ 342 (365)
T 1jof_A 278 --FELQGYIAGFKLRDCGSIEKQLFLSPT---------PTSGGHSNAVSPCPWSDEWMAITDDQ---EGWLEIYRWKDE 342 (365)
T ss_dssp --TTSCCEEEEEEECTTSCEEEEEEEEEC---------SSCCTTCCCEEECTTCTTEEEEECSS---SCEEEEEEEETT
T ss_pred --CCCCCeEEEEEECCCCCEEEeeeeeec---------CCCCcccceecCCCcCCCEEEEEEcC---CCeEEEEEEchh
Confidence 0011257777775 566654321 110 011234468999 89988766322 234555555443
No 340
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=1.5e-09 Score=112.96 Aligned_cols=281 Identities=10% Similarity=-0.044 Sum_probs=149.1
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC--Cc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP--DI 83 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~--~~ 83 (751)
.|+++|+.+ ++... .++.+... .+++||||++|+++...............|.++|+++.+...-.... ..
T Consensus 48 ~v~v~D~~t----~~~~~--~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GSILG--HVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----CeEEE--EecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 568888887 77653 24455434 89999999999886531111111123467889999876643321111 00
Q ss_pred cc-cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 84 CL-NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 84 ~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
.. ......++|||||++|++..... ...|.++
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~~-----------------------------------------------~~~v~vi 153 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFAA-----------------------------------------------GPAVGLV 153 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecCC-----------------------------------------------CCeEEEE
Confidence 00 00124679999999999874310 0357777
Q ss_pred cCCC-Cce-e-cCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCC-CCCCCCcc
Q 004475 163 SLDG-TAK-D-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPP-AEDIPVCY 237 (751)
Q Consensus 163 ~~~G-~~~-~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~-~~~~~~~~ 237 (751)
| .. +.. . +.-+.. +.+.|+|++.++.... ...+..++. +++.. .....+. ....|
T Consensus 154 D-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~------------dg~~~~vd~-~g~~~~~~~~~~~~~~~~p--- 213 (373)
T 2mad_H 154 V-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCA------------QGGLAKTDH-AGGAAGAGLVGAMLTAAQN--- 213 (373)
T ss_pred E-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcC------------CCCEEEEEC-CCcEEEEEeccccccCCcc---
Confidence 7 44 332 2 221121 3445666655544222 223455555 33222 1110000 00000
Q ss_pred CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-------------eceeEE-E
Q 004475 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------------LDLRFS-V 303 (751)
Q Consensus 238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------------~~~~~~-~ 303 (751)
-.....+++++.. +++.+ ..+.++++++. +...+.+.. ...... +
T Consensus 214 -----~~~~~~~~~~~~~-~~~~~------------~~~~v~vid~~---~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 214 -----LLTQPAQANKSGR-IVWPV------------YSGKILQADIS---AAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred -----eeecceeEecCCE-EEEEc------------CCceEEEEecc---CCcceEeeeeeecCCcccccceecCceEeE
Confidence 0012467888877 55543 22478888874 222111111 122233 5
Q ss_pred EEecCCceEEEeeeec------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcc
Q 004475 304 SWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 377 (751)
Q Consensus 304 ~~spdg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 377 (751)
.++|||+.|+...... ....+|+++|+.+. .....+.... . .+. ++|||||+.++|....
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-~vv~~i~~g~-~-p~~------i~~s~Dg~~~l~v~~~----- 338 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-QTSSQISLGH-D-VDA------ISVAQDGGPDLYALSA----- 338 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-EEEEEEECCC-C-cCe------EEECCCCCeEEEEEcC-----
Confidence 7899999887755321 12358999999885 1112232111 1 111 8899999966666621
Q ss_pred eEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 378 IYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
....|.++|+++++....
T Consensus 339 --------------~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 339 --------------GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred --------------CCCeEEEEECCCCCEEee
Confidence 124799999999887544
No 341
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.32 E-value=1.3e-11 Score=124.85 Aligned_cols=200 Identities=17% Similarity=0.088 Sum_probs=115.9
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 590 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 590 (751)
..|.||++||.+... .+. .+.........+|.|+. ++.+|+|.+...........+++.+
T Consensus 66 ~~~~lvllhG~~~~~---------~~~-----~~~~~~~~l~~~~~v~~---~d~~G~G~s~~~~~~~~~~a~~~~~--- 125 (300)
T 1kez_A 66 GEVTVICCAGTAAIS---------GPH-----EFTRLAGALRGIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQAD--- 125 (300)
T ss_dssp CSSEEEECCCSSTTC---------STT-----TTHHHHHHTSSSCCBCC---CCCTTSSTTCCBCSSHHHHHHHHHH---
T ss_pred CCCeEEEECCCcccC---------cHH-----HHHHHHHhcCCCceEEE---ecCCCCCCCCCCCCCHHHHHHHHHH---
Confidence 368999999964110 001 11222222345799988 5667777765444344555555443
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCCCCCCCCcc---------C-ccccc--ccc--h
Q 004475 591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTPF---------G-FQTEF--RTL--W 653 (751)
Q Consensus 591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~d~~~~~~---------~-~~~~~--~~~--~ 653 (751)
.+.+. .+..+++++||||||.+|+.++.++| ++++++|++++......... . +.... ... .
T Consensus 126 ~l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
T 1kez_A 126 AVIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRL 203 (300)
T ss_dssp HHHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHH
T ss_pred HHHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHH
Confidence 33332 23468999999999999999999987 48999999888643211000 0 00000 000 0
Q ss_pred hhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCCcCCccccHHHHHHHH
Q 004475 654 EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWET 732 (751)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 732 (751)
.....+..........++++|+|+++|+ |..++ +.. .. +.. ....++++++++ +|.....+....+...+
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i 274 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHI 274 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHH
Confidence 0001111111111246789999999995 55655 332 11 222 223578999999 89886446778889999
Q ss_pred HHHHHHHhc
Q 004475 733 DRWLQKYCL 741 (751)
Q Consensus 733 ~~fl~~~l~ 741 (751)
.+||.+...
T Consensus 275 ~~fl~~~~~ 283 (300)
T 1kez_A 275 DAWLGGGNS 283 (300)
T ss_dssp HHHHTCC--
T ss_pred HHHHHhccC
Confidence 999976543
No 342
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.32 E-value=3.8e-11 Score=126.03 Aligned_cols=216 Identities=10% Similarity=0.117 Sum_probs=129.6
Q ss_pred cceeEEeecCCCCCCCCcccccCCCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC----eeecc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLF 78 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~----~~~lt 78 (751)
...|.+|++.+ +..+.+..+.. ...+...+|||||++|+..+ ....|.++++.+++ ...+.
T Consensus 32 d~~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----------~d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 32 TNQVELYEQDG----NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS----------QDRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SSCBCEEEEET----TEEEECCCBCCCSSCEEEEEECTTTCCEEEEE----------TTSSEEEC------CCCCEEECC
T ss_pred CCEEEEEEccC----CceEEEEEEecCCceEEEEEEeCCCCEEEEEe----------CCCeEEEEEcCCCCceeeeeEec
Confidence 45789999987 63233322222 33688999999999998864 23567777777766 22232
Q ss_pred CCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeE
Q 004475 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (751)
Q Consensus 79 ~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (751)
.... .+..++|+|||+.|+..+.+ ..
T Consensus 98 ~~~~-----~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~ 123 (377)
T 3dwl_C 98 RLNR-----AATFVRWSPNEDKFAVGSGA-------------------------------------------------RV 123 (377)
T ss_dssp CCSS-----CEEEEECCTTSSCCEEEESS-------------------------------------------------SC
T ss_pred ccCC-----ceEEEEECCCCCEEEEEecC-------------------------------------------------Ce
Confidence 2222 47789999999999887542 35
Q ss_pred EEEEcC-CCC----ceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeecc-CCCC
Q 004475 159 LVLGSL-DGT----AKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD-LPPA 230 (751)
Q Consensus 159 l~~~~~-~G~----~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~ 230 (751)
|.++++ +++ .+.+.. + ..+..++|+|||++|+....+ ..+.+||+..+....-.. .+..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccc
Confidence 677777 443 455654 4 778899999999998876543 357888886432111000 0000
Q ss_pred C----CC-CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC----ceEeEeeceeE
Q 004475 231 E----DI-PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----PEILHKLDLRF 301 (751)
Q Consensus 231 ~----~~-~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~l~~~~~~~ 301 (751)
. .. ...+ .....+..++|+|||+. |+..+ ..+.|.++++.. +.. ...+......+
T Consensus 191 ~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~------------~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 191 SRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAG------------HDSSVTIAYPSA--PEQPPRALITVKLSQLPL 254 (377)
T ss_dssp SCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEE------------TTTEEC-CEECS--TTSCEEECCCEECSSSCE
T ss_pred cccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEe------------CCCcEEEEECCC--CCCcceeeEeecCCCCce
Confidence 0 00 0111 23344678999999998 66654 235788888752 222 34445555667
Q ss_pred E-EEEecCCceEEEee
Q 004475 302 S-VSWCDDSLALVNET 316 (751)
Q Consensus 302 ~-~~~spdg~~l~~~~ 316 (751)
. +.|+|||+.|+...
T Consensus 255 ~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 255 RSLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEEEETTEEEEEES
T ss_pred EEEEEcCCCCEEEEEc
Confidence 7 99999999887654
No 343
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.31 E-value=6.6e-11 Score=123.39 Aligned_cols=260 Identities=11% Similarity=0.096 Sum_probs=150.7
Q ss_pred eeEEeecCCCCCCCCcc-cccCCC---CcccccceeecCC----CCeEEEEEeecccccccCCceeEEEEEcCCCCeeec
Q 004475 6 GIGIHRLLPDDSLGPEK-EVHGYP---DGAKINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL 77 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~l~~~~---~~~~~~~p~~SPD----G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~l 77 (751)
.|.+|++.+ ++.. .+.... ....+...+|||| |+.|+.. ...+.|.++++.+++....
T Consensus 45 ~v~vw~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~----------~~dg~i~v~d~~~~~~~~~ 110 (366)
T 3k26_A 45 RVTLYECHS----QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA----------GSRGIIRIINPITMQCIKH 110 (366)
T ss_dssp EEEEEEECG----GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE----------ETTCEEEEECTTTCCEEEE
T ss_pred EEEEEEcCC----CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe----------cCCCEEEEEEchhceEeee
Confidence 689999986 5443 332111 2235788999999 5567764 3346899999988875544
Q ss_pred cCCCCccccceeeeeEEec-CCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhee
Q 004475 78 FESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (751)
Q Consensus 78 t~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (751)
...... .+..++|+| +++.|+..+.+
T Consensus 111 ~~~~~~----~i~~~~~~~~~~~~l~s~~~d------------------------------------------------- 137 (366)
T 3k26_A 111 YVGHGN----AINELKFHPRDPNLLLSVSKD------------------------------------------------- 137 (366)
T ss_dssp EESCCS----CEEEEEECSSCTTEEEEEETT-------------------------------------------------
T ss_pred ecCCCC----cEEEEEECCCCCCEEEEEeCC-------------------------------------------------
Confidence 332221 478899999 89888877432
Q ss_pred eEEEEEcC-CCCc-eec---CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccC---
Q 004475 157 AQLVLGSL-DGTA-KDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL--- 227 (751)
Q Consensus 157 ~~l~~~~~-~G~~-~~l---t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~--- 227 (751)
..|.++|+ +++. ..+ ..+ ..+..++|+|||++|+....+ ..+.+||+.+++.......
T Consensus 138 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~ 204 (366)
T 3k26_A 138 HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKRMMNAIKESYD 204 (366)
T ss_dssp SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHHHHHHHHHHHT
T ss_pred CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCccccccceeEE
Confidence 46778888 5633 333 234 778899999999998876543 3588999987643211110
Q ss_pred --CCCCC---------CC--CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCC------
Q 004475 228 --PPAED---------IP--VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG------ 288 (751)
Q Consensus 228 --~~~~~---------~~--~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------ 288 (751)
+.... .+ .........+..+.|+ |+. ++... ..+.|.++++.....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~~~~------------~d~~i~~wd~~~~~~~~~~~~ 269 (366)
T 3k26_A 205 YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL-ILSKS------------CENAIVCWKPGKMEDDIDKIK 269 (366)
T ss_dssp CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE-EEEEC------------SSSEEEEEEESSTTCCGGGCC
T ss_pred ecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE-EEEEe------------cCCEEEEEeCCCccccccccc
Confidence 00000 00 0011133446688888 554 44432 234677777641110
Q ss_pred ---CCceEeE---eeceeEE-EEEecC--CceEEEeeeecccceeEEEecCCCCCCcceee--eecc--cccccCCCCCC
Q 004475 289 ---EKPEILH---KLDLRFS-VSWCDD--SLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRV--FENVYSDPGSP 355 (751)
Q Consensus 289 ---~~~~~l~---~~~~~~~-~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l--~~~~--~~~~~~~~~~~ 355 (751)
.....+. .....+. +.|+|| |+.|+.... ...|.+.++.++......+ .... ...+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~----- 340 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ----VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ----- 340 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT----TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEE-----
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec----CCcEEEEECCCCCCccccceEEcccccCCceEE-----
Confidence 0111222 2233445 789999 998887652 2456667776642111111 1111 122222
Q ss_pred CeeeCCCCCEEEEee
Q 004475 356 MMTRTSTGTNVIAKI 370 (751)
Q Consensus 356 ~~~~spDG~~l~~~~ 370 (751)
++|+|||+.|+..+
T Consensus 341 -~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 341 -TSFSRDSSILIAVC 354 (366)
T ss_dssp -EEECTTSSEEEEEE
T ss_pred -EEeCCCCCeEEEEe
Confidence 78999999998877
No 344
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.31 E-value=2.5e-10 Score=122.78 Aligned_cols=126 Identities=8% Similarity=0.097 Sum_probs=72.4
Q ss_pred ceEEeeeeCCCC-ceEEEEEecCCcccccccCCCceeEEEEeCCCcee-----eeeccCCCCCCCCCccCCccCCCceee
Q 004475 175 AVYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-----RELCDLPPAEDIPVCYNSVREGMRSIS 248 (751)
Q Consensus 175 ~~~~~~~~SpDG-~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~ 248 (751)
..+..++|+||| +.|+....+ ..|.+||+.+++. ..+...... .....+......+..++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~ 292 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDP-SNRSFFSEIISSISDVK 292 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEE
T ss_pred cceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCc-cccccccccCceEEEEE
Confidence 668899999999 777665433 3688999987653 222211110 00000001112467899
Q ss_pred eecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece---------------eEE-EEEecCCceE
Q 004475 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---------------RFS-VSWCDDSLAL 312 (751)
Q Consensus 249 ~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~---------------~~~-~~~spdg~~l 312 (751)
|+|||+. |+..+ . +.|.++++. ..+.....+..... ... +.|+|||+.|
T Consensus 293 ~s~~g~~-l~~~~------------~-~~v~iwd~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l 357 (447)
T 3dw8_B 293 FSHSGRY-MMTRD------------Y-LSVKVWDLN-MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV 357 (447)
T ss_dssp ECTTSSE-EEEEE------------S-SEEEEEETT-CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE
T ss_pred ECCCCCE-EEEee------------C-CeEEEEeCC-CCccccceeeccccccccccccccccccccceEEEECCCCCEE
Confidence 9999998 55543 2 578888874 11222333332221 022 6899999998
Q ss_pred EEeeeecccceeEEEecCCCC
Q 004475 313 VNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 313 ~~~~~~~~~~~~l~~~~~~~~ 333 (751)
+..+. ...|.+.++.++
T Consensus 358 ~s~s~----dg~v~iwd~~~~ 374 (447)
T 3dw8_B 358 MTGSY----NNFFRMFDRNTK 374 (447)
T ss_dssp EEECS----TTEEEEEETTTC
T ss_pred EEecc----CCEEEEEEcCCC
Confidence 66552 346777777664
No 345
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=4e-10 Score=118.07 Aligned_cols=243 Identities=9% Similarity=0.037 Sum_probs=142.7
Q ss_pred eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC-C
Q 004475 88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G 166 (751)
Q Consensus 88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-G 166 (751)
.+..++|+|||++|+....+ ..|.++++. +
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d-------------------------------------------------g~i~iw~~~~~ 43 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSD-------------------------------------------------KTIKIFEVEGE 43 (379)
T ss_dssp CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEECC-------------------------------------------------CcEEEEecCCC
Confidence 47788999999999887432 345555552 2
Q ss_pred ---CceecCCC-ceEEeeeeCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCc
Q 004475 167 ---TAKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 167 ---~~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
....+..+ ..+..++|+|+ +++|+....+ ..+.+||+.+++...+.... ..
T Consensus 44 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~----------~~ 100 (379)
T 3jrp_A 44 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------------GKVLIWKEENGRWSQIAVHA----------VH 100 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------------SCEEEEEEETTEEEEEEEEC----------CC
T ss_pred cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------------CEEEEEEcCCCceeEeeeec----------CC
Confidence 23344445 77889999988 8888776543 35889999877532221111 11
Q ss_pred cCCCceeeeecC--CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEec----------
Q 004475 241 REGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCD---------- 307 (751)
Q Consensus 241 ~~~~~~~~~spd--G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~sp---------- 307 (751)
...+..++|+|+ |+. ++... ..+.|.++++..........+......+. +.|+|
T Consensus 101 ~~~v~~~~~~~~~~~~~-l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPL-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp SSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--------
T ss_pred CcceEEEEeCCCCCCCE-EEEec------------CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccccc
Confidence 234668999999 776 55543 23578888885221122333444556677 99999
Q ss_pred ---CCceEEEeeeecccceeEEEecCCCCCCcceee--eecccccccCCCCCCCeeeCCC---CCEEEEeeeecCCcceE
Q 004475 308 ---DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTST---GTNVIAKIKKENDEQIY 379 (751)
Q Consensus 308 ---dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~spD---G~~l~~~~~~~~~~~~~ 379 (751)
|++.|+.... . ..|.++++.++......+ .......+.. ++|+|| |+.|+..+.+
T Consensus 168 ~~~~~~~l~~~~~--d--g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~------~~~sp~~~~~~~l~s~~~d------- 230 (379)
T 3jrp_A 168 GTKESRKFVTGGA--D--NLVKIWKYNSDAQTYVLESTLEGHSDWVRD------VAWSPTVLLRSYLASVSQD------- 230 (379)
T ss_dssp --CTTCEEEEEET--T--SCEEEEEEETTTTEEEEEEEECCCSSCEEE------EEECCCCSSSEEEEEEETT-------
T ss_pred CCCCCCEEEEEeC--C--CeEEEEEecCCCcceeeEEEEecccCcEeE------EEECCCCCCCCeEEEEeCC-------
Confidence 6888877662 2 245555554431111111 1111222222 889999 7888777632
Q ss_pred EEEccCCCCCCCCCceeEEEecCCCce---eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEE
Q 004475 380 ILLNGRGFTPEGNIPFLDLFDINTGSK---ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 456 (751)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~ 456 (751)
..|.+||+.+++. ..+...... ......++|+|||+.|+.... -+.++++
T Consensus 231 --------------g~i~iwd~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~g~~l~~~~~----dg~i~iw 283 (379)
T 3jrp_A 231 --------------RTCIIWTQDNEQGPWKKTLLKEEKF---------PDVLWRASWSLSGNVLALSGG----DNKVTLW 283 (379)
T ss_dssp --------------SCEEEEEESSTTSCCEEEESSSSCC---------SSCEEEEEECSSSCCEEEEES----SSSEEEE
T ss_pred --------------CEEEEEeCCCCCccceeeeeccccC---------CCcEEEEEEcCCCCEEEEecC----CCcEEEE
Confidence 2688889887642 222221100 011123589999998876643 2346666
Q ss_pred EcC
Q 004475 457 SWP 459 (751)
Q Consensus 457 ~~~ 459 (751)
++.
T Consensus 284 ~~~ 286 (379)
T 3jrp_A 284 KEN 286 (379)
T ss_dssp EEE
T ss_pred eCC
Confidence 655
No 346
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.30 E-value=2.8e-10 Score=121.76 Aligned_cols=206 Identities=12% Similarity=0.102 Sum_probs=119.0
Q ss_pred CcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCC--------CeeeccCCCCccccceeeeeEEecCCc-
Q 004475 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--------EAKPLFESPDICLNAVFGSFVWVNNST- 99 (751)
Q Consensus 29 ~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g--------~~~~lt~~~~~~~~~~~~~~~wspDg~- 99 (751)
....+...+|+|++..++++. ...+.|+++++... +.+.+.....+ ...+..++|+|+++
T Consensus 127 h~~~v~~l~~~p~~~~~lat~---------~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATK---------TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--QKEGYGLSWNPNLNG 195 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEE---------CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC--SSCCCCEEECTTSTT
T ss_pred CCCcEEEEEECCCCCcEEEEE---------CCCCcEEEEECCCcccccCccccCCCcEEecCC--CCCeEEEEeCCCCCC
Confidence 333688999999855554443 23357888887652 11121111111 11356889999998
Q ss_pred EEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-C-------cee
Q 004475 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-T-------AKD 170 (751)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~-------~~~ 170 (751)
.|+....+ +.|.++++ ++ . ...
T Consensus 196 ~l~s~~~d-------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 196 YLLSASDD-------------------------------------------------HTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp EEEEECTT-------------------------------------------------SCEEEEETTSCCBGGGEEECSEE
T ss_pred eEEEEeCC-------------------------------------------------CeEEEEeCCCCCCCCceecccee
Confidence 66655322 35666666 32 1 223
Q ss_pred cCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceee
Q 004475 171 FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSIS 248 (751)
Q Consensus 171 lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ 248 (751)
+..+ ..+..++|+|++..++++... ...|.+||+.++.. +.+. .+......++.++
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~------------dg~i~i~d~~~~~~~~~~~----------~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVAD------------DQKLMIWDTRNNNTSKPSH----------TVDAHTAEVNCLS 284 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCSCSSSCSE----------EEECCSSCEEEEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeC------------CCeEEEEECCCCCCCccee----------EeecCCCCeEEEE
Confidence 3334 678899999966555554433 34689999986521 1110 0112223467899
Q ss_pred eecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEE
Q 004475 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 249 ~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~ 327 (751)
|+|+++++++..+ ..+.|.++++.. .......+......+. +.|+|+++.++++... .+.-.||.
T Consensus 285 ~~p~~~~~l~tg~------------~dg~v~vwd~~~-~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~-d~~i~iwd 350 (430)
T 2xyi_A 285 FNPYSEFILATGS------------ADKTVALWDLRN-LKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWD 350 (430)
T ss_dssp ECSSCTTEEEEEE------------TTSEEEEEETTC-TTSCSEEEECCSSCEEEEEECSSCTTEEEEEET-TSCCEEEE
T ss_pred eCCCCCCEEEEEe------------CCCeEEEEeCCC-CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC-CCcEEEEe
Confidence 9999998344433 235788888851 1223445555566777 9999999875554422 23345555
Q ss_pred ecC
Q 004475 328 VCP 330 (751)
Q Consensus 328 ~~~ 330 (751)
+..
T Consensus 351 ~~~ 353 (430)
T 2xyi_A 351 LSK 353 (430)
T ss_dssp GGG
T ss_pred CCC
Confidence 443
No 347
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.29 E-value=5.3e-10 Score=115.39 Aligned_cols=245 Identities=5% Similarity=-0.024 Sum_probs=152.6
Q ss_pred cceeEEeecCCCCCCCC----cccccCCCCcccccceeecCCCC-eEEEEEeecccccccCCceeEEEEEc-CCCCeeec
Q 004475 4 FTGIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA-ETGEAKPL 77 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~----~~~l~~~~~~~~~~~p~~SPDG~-~iaf~~~~~~~~~~~~~~~~l~i~~~-~~g~~~~l 77 (751)
...|++|++.+ ++ .+.+. .....+...+|+|||+ .|+... ..+.|+++++ .+++...+
T Consensus 32 d~~v~iw~~~~----~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~~wd~~~~~~~~~~ 95 (342)
T 1yfq_A 32 DGSLTVYKFDI----QAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGT----------VQGEILKVDLIGSPSFQAL 95 (342)
T ss_dssp TSEEEEEEEET----TTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEE----------TTSCEEEECSSSSSSEEEC
T ss_pred CCeEEEEEeCC----CCccccceeee--ecCCceEEEEECCCCCcEEEEEc----------CCCeEEEEEeccCCceEec
Confidence 35789999988 66 44444 2333688999999999 887753 3468889999 88888777
Q ss_pred cC--CCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhe
Q 004475 78 FE--SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (751)
Q Consensus 78 t~--~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (751)
.. ... .+..++|+| ++.|+..+.+
T Consensus 96 ~~~~~~~-----~v~~l~~~~-~~~l~s~~~d------------------------------------------------ 121 (342)
T 1yfq_A 96 TNNEANL-----GICRICKYG-DDKLIAASWD------------------------------------------------ 121 (342)
T ss_dssp BSCCCCS-----CEEEEEEET-TTEEEEEETT------------------------------------------------
T ss_pred cccCCCC-----ceEEEEeCC-CCEEEEEcCC------------------------------------------------
Confidence 54 332 477899999 8888877432
Q ss_pred eeEEEEEcC-C---------CC-ceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC-ceee-
Q 004475 156 TAQLVLGSL-D---------GT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVR- 222 (751)
Q Consensus 156 ~~~l~~~~~-~---------G~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~- 222 (751)
..|.++++ + ++ ...+.....+..++|+|++ |++... ...+.+||+.+ ....
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~-------------d~~i~i~d~~~~~~~~~ 185 (342)
T 1yfq_A 122 -GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMN-------------NSQVQWFRLPLCEDDNG 185 (342)
T ss_dssp -SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEES-------------TTEEEEEESSCCTTCCC
T ss_pred -CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeC-------------CCeEEEEECCccccccc
Confidence 46777777 4 53 2233323778899999998 554432 23688999986 4321
Q ss_pred eeccCCCCCCCCCccCCccCCCceeeeec-CCCceEEEEEeccCCCCccccCcccceeeccCCCC--C--CCCceEeEee
Q 004475 223 ELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPA--E--GEKPEILHKL 297 (751)
Q Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~--~~~~~~l~~~ 297 (751)
..... .....+..+.|+| ||+. ++... ..+.+.+++++.. + ......+...
T Consensus 186 ~~~~~-----------~~~~~i~~i~~~~~~~~~-l~~~~------------~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 186 TIEES-----------GLKYQIRDVALLPKEQEG-YACSS------------IDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEEC-----------SCSSCEEEEEECSGGGCE-EEEEE------------TTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred eeeec-----------CCCCceeEEEECCCCCCE-EEEEe------------cCCcEEEEEEcCCCcccccccceeeecc
Confidence 11111 1122356899999 9987 55543 2346677666421 0 1223333333
Q ss_pred ce---------eEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-cccccCCCCCCCeeeCCCCCEE
Q 004475 298 DL---------RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNV 366 (751)
Q Consensus 298 ~~---------~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spDG~~l 366 (751)
.. .+. +.|+|||+.|+.... ...|.++++.++ ......... ...+.. ++ |||+.|
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~--~~~~~~~~~h~~~v~~------~~--~~~~~l 307 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGS----DGIISCWNLQTR--KKIKNFAKFNEDSVVK------IA--CSDNIL 307 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEET----TSCEEEEETTTT--EEEEECCCCSSSEEEE------EE--ECSSEE
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecC----CceEEEEcCccH--hHhhhhhcccCCCceE------ec--CCCCeE
Confidence 22 566 999999999886652 246777788764 222222211 222211 33 999999
Q ss_pred EEeeee
Q 004475 367 IAKIKK 372 (751)
Q Consensus 367 ~~~~~~ 372 (751)
+..+.+
T Consensus 308 ~s~s~D 313 (342)
T 1yfq_A 308 CLATSD 313 (342)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 988854
No 348
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.28 E-value=2.5e-09 Score=108.87 Aligned_cols=281 Identities=14% Similarity=0.144 Sum_probs=160.8
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 113 (751)
....|||++ .||.. ....|+++|+++|+..++.....+. ..+..++|+|||++|+..+.+
T Consensus 29 ~~l~WS~~~-~lAvg-----------~D~tV~iWd~~tg~~~~~~~~~~~~--~~V~~v~~~~~~~~l~sgs~D------ 88 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-----------LDNSVYLWSASSGDILQLLQMEQPG--EYISSVAWIKEGNYLAVGTSS------ 88 (318)
T ss_dssp BCEEECTTS-EEEEE-----------ETTEEEEEETTTCCEEEEEECCSTT--CCEEEEEECTTSSEEEEEETT------
T ss_pred eEEEECCCC-EEEEE-----------eCCEEEEEECCCCCEEEEEEecCCC--CeEEEEEECCCCCEEEEEECC------
Confidence 447899997 67763 2367999999999876654332221 137789999999999887543
Q ss_pred CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCCceEEeeeeCCCCceEEE
Q 004475 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLI 191 (751)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~i~~ 191 (751)
..|.++++ +|+ .+.+..+ ......++++++.|+.
T Consensus 89 -------------------------------------------g~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 89 -------------------------------------------AEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILSS 124 (318)
T ss_dssp -------------------------------------------SEEEEEETTTTEEEEEEECC-SSCEEEEEEETTEEEE
T ss_pred -------------------------------------------CcEEEeecCCceeEEEecCc-cceEEEeecCCCEEEE
Confidence 46777888 663 3333333 1122346677777665
Q ss_pred EEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (751)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~ 269 (751)
.... ..+..++...... ..+..+ ...+..+.|+++|+. ++...
T Consensus 125 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-l~s~~-------- 169 (318)
T 4ggc_A 125 GSRS-------------GHIHHHDVRVAEHHVATLSGH-------------SQEVCGLRWAPDGRH-LASGG-------- 169 (318)
T ss_dssp EETT-------------SEEEEEETTSSSCEEEEEECC-------------SSCEEEEEECTTSSE-EEEEE--------
T ss_pred EecC-------------CceEeeecCCCceeEEEEcCc-------------cCceEEEEEcCCCCE-EEEEe--------
Confidence 4432 2345565554322 222111 122447799999997 55433
Q ss_pred cccCcccceeeccCCCCCCC--CceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccc
Q 004475 270 VEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 346 (751)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 346 (751)
..+.+.++++...... ...........+. ..++|++..++..... .....|.+.+.... ........ ..
T Consensus 170 ----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~--~~~~~~~~-~~ 241 (318)
T 4ggc_A 170 ----NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSG--ACLSAVDA-HS 241 (318)
T ss_dssp ----TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTC--CEEEEEEC-SS
T ss_pred ----cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEecccc--cccccccc-ee
Confidence 2356777777421111 1122223344566 8899998887655422 22345555566553 11222111 11
Q ss_pred cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeec
Q 004475 347 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 426 (751)
Q Consensus 347 ~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 426 (751)
.+.. ..|+|+++.++..+. .....|++||+.+++....+..... .+..
T Consensus 242 ~v~~------~~~~~~~~~~~~~sg-------------------~~d~~i~iwd~~~~~~~~~l~gH~~----~V~~--- 289 (318)
T 4ggc_A 242 QVCS------ILWSPHYKELISGHG-------------------FAQNQLVIWKYPTMAKVAELKGHTS----RVLS--- 289 (318)
T ss_dssp CEEE------EEEETTTTEEEEEEC-------------------TTTCCEEEEETTTCCEEEEECCCSS----CEEE---
T ss_pred eeee------eeecccccceEEEEE-------------------cCCCEEEEEECCCCcEEEEEcCCCC----CEEE---
Confidence 1111 679999999887661 1234789999998877554432211 1222
Q ss_pred CCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCC
Q 004475 427 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 461 (751)
Q Consensus 427 ~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g 461 (751)
++|||||+.|+-. ... +.|.++|+.+.
T Consensus 290 ----l~~spdg~~l~S~-s~D---~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 ----LTMSPDGATVASA-AAD---ETLRLWRCFEL 316 (318)
T ss_dssp ----EEECTTSSCEEEE-ETT---TEEEEECCSCC
T ss_pred ----EEEcCCCCEEEEE-ecC---CeEEEEECCCC
Confidence 5899999977643 322 35777776543
No 349
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.28 E-value=5.1e-10 Score=115.49 Aligned_cols=206 Identities=9% Similarity=0.060 Sum_probs=115.0
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--eeccCCCCccccceeeeeEEec--CCcEEEEeecC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWVN--NSTLLIFTIPS 107 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--~~lt~~~~~~~~~~~~~~~wsp--Dg~~l~~~~~~ 107 (751)
.+...+|||||++||... ..+.|.++++.++.. +.+.....+ ...+..++|+| |++.|+..+.+
T Consensus 13 ~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCS----------SDQHIKVFKLDKDTSNWELSDSWRAH--DSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CEEEEEECSSSSEEEEEE----------TTSEEEEEEECSSSCCEEEEEEEECC--SSCEEEEEECCGGGCSEEEEEETT
T ss_pred ceeEEEEcCCCCEEEEee----------CCCeEEEEECCCCCCcceecceeccC--CCcEEEEEEcCCCCCCEEEEEcCC
Confidence 588999999999998863 235677777765431 222111111 11477899999 69888877543
Q ss_pred CCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC----------ceecCCC-c
Q 004475 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----------AKDFGTP-A 175 (751)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~----------~~~lt~~-~ 175 (751)
..|.++++ +++ ...+..+ .
T Consensus 81 -------------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 111 (351)
T 3f3f_A 81 -------------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKG 111 (351)
T ss_dssp -------------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEECCCSS
T ss_pred -------------------------------------------------CeEEEEecCCCcccccccCcceeeeecccCC
Confidence 34555565 331 2333444 6
Q ss_pred eEEeeeeCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC-CCCCCccCCccCCCceeeeecC
Q 004475 176 VYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA-EDIPVCYNSVREGMRSISWRAD 252 (751)
Q Consensus 176 ~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~spd 252 (751)
.+..++|+|+ |++|+....+ ..+.+||+.+++.......... .............+..+.|+|+
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 178 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGND-------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPS 178 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETT-------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCC
T ss_pred ceeEEEEcCCCCCcEEEEecCC-------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccC
Confidence 7889999999 9988876543 3688999876543211110000 0000001122334668999998
Q ss_pred ---CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe---EeeceeEE-EEEecCC----ceEEEeeeeccc
Q 004475 253 ---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL---HKLDLRFS-VSWCDDS----LALVNETWYKTS 321 (751)
Q Consensus 253 ---G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---~~~~~~~~-~~~spdg----~~l~~~~~~~~~ 321 (751)
++. ++... ..+.+...... .+....+ ......+. +.|+|++ +.|+... ..+
T Consensus 179 ~~~~~~-l~~~~------------~~~~~~~~~~~---~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg 240 (351)
T 3f3f_A 179 RFSPEK-LAVSA------------LEQAIIYQRGK---DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC--KDG 240 (351)
T ss_dssp SSSCCE-EEEEE------------TTEEEEEEECT---TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE--TTS
T ss_pred CCCCcE-EEEec------------CCCcEEEEccC---CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc--CCC
Confidence 665 55443 11233333332 2232222 23445667 9999998 6666554 223
Q ss_pred ceeEEEec
Q 004475 322 QTRTWLVC 329 (751)
Q Consensus 322 ~~~l~~~~ 329 (751)
.-.+|.+.
T Consensus 241 ~i~iwd~~ 248 (351)
T 3f3f_A 241 RIRIFKIT 248 (351)
T ss_dssp CEEEEEEE
T ss_pred eEEEEeCC
Confidence 34455443
No 350
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2.9e-10 Score=116.80 Aligned_cols=254 Identities=11% Similarity=0.027 Sum_probs=131.8
Q ss_pred cceeEEeecCCCCCCCCcccccCC--C-CcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC-----ee
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGY--P-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-----AK 75 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~--~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-----~~ 75 (751)
...|.+|++.+ +..+.+..+ . ....+...+|||||+.||..+ ....|.+++++.+. .+
T Consensus 33 D~~i~lw~~~~----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s----------~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 33 DRKIKLVSVKY----DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS----------FDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp SSCEEEEECSS----SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE----------TTSCEEEEEC-------CCCE
T ss_pred CCEEEEEEecC----CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe----------CCCcEEEEEcccCcCccccce
Confidence 34688999977 543332212 1 233688999999999998764 22455666654321 11
Q ss_pred eccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhe
Q 004475 76 PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (751)
Q Consensus 76 ~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (751)
.+.....+ ...+..++|||||++|+..+.+
T Consensus 99 ~~~~~~~h--~~~V~~v~~sp~g~~las~s~D------------------------------------------------ 128 (330)
T 2hes_X 99 LLAIIEGH--ENEVKGVAWSNDGYYLATCSRD------------------------------------------------ 128 (330)
T ss_dssp EEEEEC------CEEEEEECTTSCEEEEEETT------------------------------------------------
T ss_pred eEEEEcCC--CCcEEEEEECCCCCEEEEEeCC------------------------------------------------
Confidence 11101111 1136789999999999887543
Q ss_pred eeEEEEEcC-C-CC----ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCC
Q 004475 156 TAQLVLGSL-D-GT----AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (751)
Q Consensus 156 ~~~l~~~~~-~-G~----~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 228 (751)
..|.++++ + ++ ...+..+ ..+..++|+|||+.|+..+.+ ..+.+|+..++..+.+...
T Consensus 129 -~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------------~~i~iW~~~~~~~~~~~~~- 193 (330)
T 2hes_X 129 -KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------------DTVRIWKDYDDDWECVAVL- 193 (330)
T ss_dssp -SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------------SCEEEEEEETTEEEEEEEE-
T ss_pred -CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCCeeEEEEc-
Confidence 34555665 2 21 2234444 678899999999988876543 3577888765432222111
Q ss_pred CCCCCCCccCCccCCCceeeeecCCCce-EEEEEeccCCCCccccCcccceeeccCCCCCCCCc---eE---eEe-ecee
Q 004475 229 PAEDIPVCYNSVREGMRSISWRADKPST-LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EI---LHK-LDLR 300 (751)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~spdG~~~-i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~---l~~-~~~~ 300 (751)
......+..+.|+|++... |+..+ ..+.|.++++........ .. +.. ....
T Consensus 194 ---------~~h~~~v~~~~~~~~~~~~~l~s~s------------~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (330)
T 2hes_X 194 ---------NGHEGTVWSSDFDKTEGVFRLCSGS------------DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ 252 (330)
T ss_dssp ---------CCCSSCEEEEEECCSSSSCEEEEEE------------TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC
T ss_pred ---------cCCCCcEEEEEecCCCCeeEEEEEe------------CCCeEEEEEecCCCccccceeEEeeecccccccc
Confidence 1112335688999994321 33322 224566666531100000 11 111 3345
Q ss_pred EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee---ecccc-cccCCCCCCCeeeCC--CCCEEEEee
Q 004475 301 FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF---DRVFE-NVYSDPGSPMMTRTS--TGTNVIAKI 370 (751)
Q Consensus 301 ~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~---~~~~~-~~~~~~~~~~~~~sp--DG~~l~~~~ 370 (751)
+. ++|++++ .|+... ..+.-.||. ..++ ..+.+. ..... .+.. ++|+| ||+.|+..+
T Consensus 253 v~~v~~s~~~-~l~s~~--~dg~v~iw~--~~~~--~~~~~~~~~~~h~~~~v~~------v~~~~~~~~~~las~s 316 (330)
T 2hes_X 253 VYNVAWGFNG-LIASVG--ADGVLAVYE--EVDG--EWKVFAKRALCHGVYEINV------VKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECTTS-CEEEEE--TTSCEEEEE--EETT--EEEEEEEESCTTTTSCEEE------EEEC-----CCEEEEE
T ss_pred eEEEEEcCCC-EEEEEe--CCCEEEEEE--cCCC--ceEEEeccccccccceEEE------EEEecCCCceEEEEec
Confidence 66 8999776 455444 223334554 3332 111111 11111 1222 77999 788888777
No 351
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.2e-09 Score=112.16 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=111.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee---ccCCCCccccceeeeeEEecCCcEEEEeecCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~---lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 108 (751)
.+....|||| .||..+ ....|.++++.+++.+. +..... ...+..++|+|||+.|+..+.+
T Consensus 16 ~v~~~~~s~~--~las~~----------~D~~i~lw~~~~~~~~~~~~~~~~~h---~~~v~~v~~sp~~~~las~s~D- 79 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGS----------TDRKIKLVSVKYDDFTLIDVLDETAH---KKAIRSVAWRPHTSLLAAGSFD- 79 (330)
T ss_dssp CEEEEEEETT--EEEEEE----------SSSCEEEEECSSSCCEEEEEECTTCC---CSCEEEEEECTTSSEEEEEETT-
T ss_pred ceeeeccCCC--EEEEEc----------CCCEEEEEEecCCCeEEEEEEecCCc---cCCEEEEEECCCCCEEEEEeCC-
Confidence 5778889998 666542 33567777877654322 211101 1147889999999998877543
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC--------CC-ceecCCC-ceEE
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD--------GT-AKDFGTP-AVYT 178 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------G~-~~~lt~~-~~~~ 178 (751)
..|.++++. ++ ...+..+ ..+.
T Consensus 80 ------------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 80 ------------------------------------------------STVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp ------------------------------------------------SCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred ------------------------------------------------CcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 234444441 11 1223334 6788
Q ss_pred eeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-Cce-eeeeccCCCCCCCCCccCCccCCCceeeeecCCCce
Q 004475 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (751)
Q Consensus 179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~ 256 (751)
.++|+|||++|+..+.+ ..+.+||+. ++. .+.+.. +......+..+.|+|||+.
T Consensus 112 ~v~~sp~g~~las~s~D-------------~~v~iwd~~~~~~~~~~~~~----------~~~h~~~v~~v~~~p~~~~- 167 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRD-------------KSVWIWETDESGEEYECISV----------LQEHSQDVKHVIWHPSEAL- 167 (330)
T ss_dssp EEEECTTSCEEEEEETT-------------SCEEEEECCTTCCCCEEEEE----------ECCCSSCEEEEEECSSSSE-
T ss_pred EEEECCCCCEEEEEeCC-------------CEEEEEeccCCCCCeEEEEE----------eccCCCceEEEEECCCCCE-
Confidence 99999999998876544 358899984 221 111111 1112234668999999987
Q ss_pred EEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecC--CceEEEeeeecccceeEEEec
Q 004475 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDD--SLALVNETWYKTSQTRTWLVC 329 (751)
Q Consensus 257 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spd--g~~l~~~~~~~~~~~~l~~~~ 329 (751)
|+..+ ..+.|.+++....+......+......+. +.|+|+ +..|+..+ ....-.||.+.
T Consensus 168 l~s~s------------~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~~~ 229 (330)
T 2hes_X 168 LASSS------------YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWKYM 229 (330)
T ss_dssp EEEEE------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEEEE
T ss_pred EEEEc------------CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEEec
Confidence 55543 23467777653100012223334455666 899999 55565544 23344666554
No 352
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.27 E-value=2.6e-10 Score=116.43 Aligned_cols=230 Identities=13% Similarity=0.112 Sum_probs=129.7
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEec--CCcEEEEeecCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN--NSTLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp--Dg~~l~~~~~~~~ 109 (751)
.+...+|||||++||..+ ....|.++++.+++...+.....+ ...+..++|+| +|+.|+..+.+
T Consensus 15 ~V~~v~~s~~g~~lasgs----------~D~~v~lwd~~~~~~~~~~~l~gH--~~~V~~v~~~~~~~~~~l~s~s~D-- 80 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCS----------SDRSVKIFDVRNGGQILIADLRGH--EGPVWQVAWAHPMYGNILASCSYD-- 80 (316)
T ss_dssp CEEEEEECGGGCEEEEEE----------TTTEEEEEEEETTEEEEEEEEECC--SSCEEEEEECCGGGSSCEEEEETT--
T ss_pred eEEEeeEcCCCCEEEEEe----------CCCeEEEEEecCCCcEEEEEEcCC--CccEEEEEeCCCCCCCEEEEEECC--
Confidence 578899999999998864 235666667766643322111111 11477889986 48888877543
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecCCC-ceEEeeeeCC
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPSP 184 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt~~-~~~~~~~~Sp 184 (751)
..|.++|+ +|+. ..+..+ ..+..++|+|
T Consensus 81 -----------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p 113 (316)
T 3bg1_A 81 -----------------------------------------------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAP 113 (316)
T ss_dssp -----------------------------------------------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECC
T ss_pred -----------------------------------------------CEEEEEECCCCcceEEEEccCCCCceEEEEECC
Confidence 35677777 5532 233334 6678999999
Q ss_pred C--CceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCC--------
Q 004475 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADK-------- 253 (751)
Q Consensus 185 D--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG-------- 253 (751)
| |+.|+..+.+ ..+.+|+..++.. ..... +......+..+.|+|++
T Consensus 114 ~~~g~~lasgs~D-------------~~i~lwd~~~~~~~~~~~~----------~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 114 HDYGLILACGSSD-------------GAISLLTYTGEGQWEVKKI----------NNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp TTTCSCEEEECSS-------------SCEEEEEECSSSCEEECCB----------TTSSSSCBCCCEECCCCCC------
T ss_pred CCCCcEEEEEcCC-------------CCEEEEecCCCCCcceeee----------eccccCCcceEEEccccCCcccccc
Confidence 8 7777765433 3578888875421 11111 11112235578999984
Q ss_pred ---------CceEEEEEeccCCCCccccCcccceeeccCCCCCCCC---ceEeEeeceeEE-EEEecCC----ceEEEee
Q 004475 254 ---------PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDLRFS-VSWCDDS----LALVNET 316 (751)
Q Consensus 254 ---------~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~~~~~~-~~~spdg----~~l~~~~ 316 (751)
+. ++.. ...+.|.++++.. +.. ...+......+. ++|+|++ +.|+..+
T Consensus 171 ~~~~~~~~~~~-l~sg------------s~D~~v~lWd~~~--~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 171 PSGQKPNYIKR-FASG------------GCDNLIKLWKEEE--DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CCSCCCCCCCB-EECC------------BTTSBCCEEEECT--TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred ccccCccccce-EEEe------------cCCCeEEEEEeCC--CCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 22 2221 1234677777641 111 122333445567 9999997 6666554
Q ss_pred eecccceeEEEecCCCC---CCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 317 WYKTSQTRTWLVCPGSK---DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 317 ~~~~~~~~l~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
. . ..|.+.++.+. ....+.+... ...++. ++|+|||+.|+..+.
T Consensus 236 ~--D--~~v~iw~~~~~~~~~~~~~~~~~~-~~~v~~------v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 236 Q--D--GRVFIWTCDDASSNTWSPKLLHKF-NDVVWH------VSWSITANILAVSGG 282 (316)
T ss_dssp T--T--CEEEEEECSSTTCCCCBCCEEEEC-SSCEEE------EEECTTTCCEEEEES
T ss_pred C--C--CeEEEEEccCccccchhhhhhhcC-CCcEEE------EEEcCCCCEEEEEcC
Confidence 2 2 24444444431 0111223211 222333 889999999988773
No 353
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.27 E-value=7.9e-11 Score=116.75 Aligned_cols=198 Identities=13% Similarity=0.052 Sum_probs=112.8
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.||++||+|. +...|..+ .. +..+|.|++++ .+|++.+...........+++.+.++.
T Consensus 21 ~~~lv~lhg~~~-----------~~~~~~~~----~~--l~~~~~v~~~d---~~G~~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGG-----------SAFSYASL----PR--LKSDTAVVGLN---CPYARDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTC-----------CGGGGTTS----CC--CSSSEEEEEEE---CTTTTCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCC-----------CHHHHHHH----Hh--cCCCCEEEEEE---CCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 588999999752 11223322 12 36789999944 445544433333455666666666654
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEccCCCCCCCCcc--------------Cc-------cc
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLTPF--------------GF-------QT 647 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~~~~d~~~~~~--------------~~-------~~ 647 (751)
+. ...++.++||||||.+|+.++. ..|++++++|++++......... +. ..
T Consensus 81 ~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3ils_A 81 RQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGS 155 (265)
T ss_dssp HC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSC
T ss_pred hC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCC
Confidence 42 1257999999999999999998 67788999998876532111110 00 00
Q ss_pred ccccchhhH---HHHHhcCc--ccccCCCCCCEE-EEEcCC---CCCCCC------------ChHHHHHHHHHHHhCCCc
Q 004475 648 EFRTLWEAT---NVYIEMSP--ITHANKIKKPIL-IIHGEV---DDKVGL------------FPMQAERFFDALKGHGAL 706 (751)
Q Consensus 648 ~~~~~~~~~---~~~~~~~~--~~~~~~~~~P~l-i~~G~~---D~~vp~------------~~~~~~~~~~~l~~~~~~ 706 (751)
.....+-.+ ..+..... .....++++|++ +++|++ |..++. +........+.+ .+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~~~ 233 (265)
T 3ils_A 156 TEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM--PGAS 233 (265)
T ss_dssp SCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS--TTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC--Cccc
Confidence 000001000 11111111 112346889987 999999 987720 022222222211 1147
Q ss_pred EEEEEeCCCCCcCCc-cccHHHHHHHHHHHH
Q 004475 707 SRLVLLPFEHHVYAA-RENVMHVIWETDRWL 736 (751)
Q Consensus 707 ~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl 736 (751)
++++++++++|.+.. .+....+.+.+.+||
T Consensus 234 ~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 234 FDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred eeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 899999999998753 345566666677665
No 354
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.26 E-value=2.2e-09 Score=108.34 Aligned_cols=251 Identities=9% Similarity=0.084 Sum_probs=137.6
Q ss_pred eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-
Q 004475 88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG- 166 (751)
Q Consensus 88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G- 166 (751)
.+..++|||||++|+..+.+ ..|.++++.+
T Consensus 11 ~V~~~~~s~~g~~las~s~D-------------------------------------------------~~v~iw~~~~~ 41 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSD-------------------------------------------------KTIKIFEVEGE 41 (297)
T ss_dssp CEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEEBCSS
T ss_pred ceEEEEECCCCCEEEEEeCC-------------------------------------------------CEEEEEecCCC
Confidence 36788999999999887543 3455666632
Q ss_pred ---CceecCCC-ceEEeeeeCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCc
Q 004475 167 ---TAKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 167 ---~~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
....+..+ ..+..++|+|+ |+.|+..+.+ ..+.+||+.+++...+... ...
T Consensus 42 ~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------------~~v~iWd~~~~~~~~~~~~----------~~h 98 (297)
T 2pm7_B 42 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------------GKVMIWKEENGRWSQIAVH----------AVH 98 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------------TEEEEEEBSSSCBCCCEEE----------CCC
T ss_pred CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-------------CEEEEEEcCCCceEEEEEe----------ecC
Confidence 23455555 77889999975 7877765543 3688999986643222111 112
Q ss_pred cCCCceeeeecC--CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecC---------
Q 004475 241 REGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDD--------- 308 (751)
Q Consensus 241 ~~~~~~~~~spd--G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spd--------- 308 (751)
...+..++|+|+ |+. |+..+ ..+.+.++++..........+......+. +.|+|+
T Consensus 99 ~~~v~~v~~~p~~~g~~-l~s~s------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPM-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp SSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCceeEEEeCcCCCCcE-EEEEE------------CCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCC
Confidence 234668999998 665 45443 23577788774211111333444555666 899997
Q ss_pred ----CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCC---CEEEEeeeecCCcceEEE
Q 004475 309 ----SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG---TNVIAKIKKENDEQIYIL 381 (751)
Q Consensus 309 ----g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG---~~l~~~~~~~~~~~~~~~ 381 (751)
++.|+.++ .+..-.||.++..................+.. ++|+||+ ++|+..+.+
T Consensus 166 ~~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~------v~~sp~~~~~~~las~s~D--------- 228 (297)
T 2pm7_B 166 GTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD------VAWSPTVLLRSYMASVSQD--------- 228 (297)
T ss_dssp ----CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEE------EEECCCCSSSEEEEEEETT---------
T ss_pred CCCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEE------EEECCCCCCceEEEEEECC---------
Confidence 45666554 22334555544322100011111222222333 8899996 667666632
Q ss_pred EccCCCCCCCCCceeEEEecCCCce---eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475 382 LNGRGFTPEGNIPFLDLFDINTGSK---ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 458 (751)
Q Consensus 382 ~~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~ 458 (751)
..|.+||+.++.. ..+..... . ......++|||||+.|+..... ..+.+++.
T Consensus 229 ------------~~v~iWd~~~~~~~~~~~~~~~~~--~-------~~~v~~~~~s~~g~~las~~~D----~~v~lw~~ 283 (297)
T 2pm7_B 229 ------------RTCIIWTQDNEQGPWKKTLLKEEK--F-------PDVLWRASWSLSGNVLALSGGD----NKVTLWKE 283 (297)
T ss_dssp ------------SCEEEEEESSTTSCCEEEESSSSC--C-------SSCEEEEEECSSSCCEEEEETT----SCEEEEEE
T ss_pred ------------CcEEEEEeCCCCCccceeeeeccc--C-------CCcEEEEEECCCCCEEEEEcCC----CcEEEEEE
Confidence 2678888865431 12221110 0 0111236899999988765422 23555554
Q ss_pred C-CCceeE
Q 004475 459 P-LKKSSQ 465 (751)
Q Consensus 459 ~-~g~~~~ 465 (751)
. .|+...
T Consensus 284 ~~~g~w~~ 291 (297)
T 2pm7_B 284 NLEGKWEP 291 (297)
T ss_dssp CTTSCEEE
T ss_pred CCCCcEEe
Confidence 3 244443
No 355
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.25 E-value=1.5e-09 Score=114.91 Aligned_cols=274 Identities=14% Similarity=0.098 Sum_probs=158.2
Q ss_pred ceeEEeecCCCCCCCCcccccCC------------CCcccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGY------------PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET 71 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~------------~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~ 71 (751)
..|.+|++.+ ++....... .....+...+|+| +++.|+.. ...+.|.++++.+
T Consensus 66 g~i~iw~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----------~~d~~i~iwd~~~ 131 (408)
T 4a11_B 66 GVIVLYDLEN----SSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS----------SFDKTLKVWDTNT 131 (408)
T ss_dssp SCEEEEECCC----CSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE----------ETTSEEEEEETTT
T ss_pred CeEEEEECCC----CcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE----------eCCCeEEEeeCCC
Confidence 4689999988 655443210 1233688999999 66677664 2346888899988
Q ss_pred CCeeeccCCCCccccceeeeeEEecCC---cEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccch
Q 004475 72 GEAKPLFESPDICLNAVFGSFVWVNNS---TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE 148 (751)
Q Consensus 72 g~~~~lt~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (751)
++......... .+..+.|+|++ +.|+....+
T Consensus 132 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------- 165 (408)
T 4a11_B 132 LQTADVFNFEE-----TVYSHHMSPVSTKHCLVAVGTRG----------------------------------------- 165 (408)
T ss_dssp TEEEEEEECSS-----CEEEEEECSSCSSCCEEEEEESS-----------------------------------------
T ss_pred CccceeccCCC-----ceeeeEeecCCCCCcEEEEEcCC-----------------------------------------
Confidence 87666544333 35677888754 467766332
Q ss_pred hhhhhheeeEEEEEcC-CC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce--eee
Q 004475 149 SLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRE 223 (751)
Q Consensus 149 ~~~~~~~~~~l~~~~~-~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~ 223 (751)
..|.++++ ++ ....+..+ ..+..++|+|||++++++... ...+.+||+..+. ...
T Consensus 166 --------~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~------------dg~i~i~d~~~~~~~~~~ 225 (408)
T 4a11_B 166 --------PKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA------------DSRVKLWDVRRASGCLIT 225 (408)
T ss_dssp --------SSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET------------TSCEEEEETTCSSCCSEE
T ss_pred --------CeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC------------CCcEEEEECCCCCccccc
Confidence 46778888 55 34555545 778899999999986655443 3468899997653 222
Q ss_pred eccCCCCC--CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-----
Q 004475 224 LCDLPPAE--DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK----- 296 (751)
Q Consensus 224 l~~~~~~~--~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~----- 296 (751)
+....... .....+......+..++|+|||+. |+... ..+.|.++++.. +........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~------------~dg~i~vwd~~~--~~~~~~~~~~~~~~ 290 (408)
T 4a11_B 226 LDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH-LLTVG------------TDNRMRLWNSSN--GENTLVNYGKVCNN 290 (408)
T ss_dssp CCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE-EEEEE------------TTSCEEEEETTT--CCBCCCCCCCCCCC
T ss_pred ccccccccceeeccccccccCceeEEEEcCCCCE-EEEec------------CCCeEEEEECCC--Cccceecccccccc
Confidence 21111110 011112233445778999999998 55543 235688888752 111111110
Q ss_pred eceeEEEEE-ecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCC
Q 004475 297 LDLRFSVSW-CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 375 (751)
Q Consensus 297 ~~~~~~~~~-spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 375 (751)
........+ ...+..+++... ...|.++++.++ ............+.. ++|+|||+.|+..+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~d--- 355 (408)
T 4a11_B 291 SKKGLKFTVSCGCSSEFVFVPY----GSTIAVYTVYSG--EQITMLKGHYKTVDC------CVFQSNFQELYSGSRD--- 355 (408)
T ss_dssp CSSCCCCEECCSSSSCEEEEEE----TTEEEEEETTTC--CEEEEECCCSSCEEE------EEEETTTTEEEEEETT---
T ss_pred ccccceeEEecCCCceEEEEec----CCEEEEEECcCC--cceeeeccCCCeEEE------EEEcCCCCEEEEECCC---
Confidence 011111222 233444555442 246777887774 223322222222222 7899999998887732
Q ss_pred cceEEEEccCCCCCCCCCceeEEEecCCCce
Q 004475 376 EQIYILLNGRGFTPEGNIPFLDLFDINTGSK 406 (751)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 406 (751)
..|.+|++.+++.
T Consensus 356 ------------------g~i~iw~~~~~~~ 368 (408)
T 4a11_B 356 ------------------CNILAWVPSLYEP 368 (408)
T ss_dssp ------------------SCEEEEEECC---
T ss_pred ------------------CeEEEEeCCCCCc
Confidence 2788899987764
No 356
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.25 E-value=9.2e-09 Score=105.34 Aligned_cols=311 Identities=12% Similarity=0.082 Sum_probs=163.4
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecC-CCCCCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPK 114 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~-~~~~~~~ 114 (751)
....|||++++.+.. ........|+++|+++++...-..... . -. ++.||||++|+..... .+..
T Consensus 38 ~~~~pd~~~vyV~~~-----~~~~~~~~V~ViD~~t~~v~~~I~vG~---~--P~-va~spDG~~lyVan~~~~r~~--- 103 (386)
T 3sjl_D 38 EAPAPDARRVYVNDP-----AHFAAVTQQFVIDGEAGRVIGMIDGGF---L--PN-PVVADDGSFIAHASTVFSRIA--- 103 (386)
T ss_dssp CCCCCCTTEEEEEEC-----GGGCSSEEEEEEETTTTEEEEEEEECS---S--CE-EEECTTSSCEEEEEEEEEETT---
T ss_pred eccCCCCCEEEEEcC-----cccCCCCEEEEEECCCCeEEEEEECCC---C--Cc-EEECCCCCEEEEEcccccccc---
Confidence 455799999865431 101224799999999887443222111 1 23 8999999999887320 0000
Q ss_pred CCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eec--CC------CceEEeeeeCC
Q 004475 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDF--GT------PAVYTAVEPSP 184 (751)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~l--t~------~~~~~~~~~Sp 184 (751)
.+ .....|.++|. +++. ..+ .. ......+.+||
T Consensus 104 --------------~G-----------------------~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 104 --------------RG-----------------------ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp --------------EE-----------------------EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred --------------cC-----------------------CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 00 01246888898 6643 223 11 01344689999
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCc-eeeeecCCCceEEEEEec
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~spdG~~~i~~~~~~ 263 (751)
||+++++..... ...+.++|+.+.+...-...++.... ...+.+ -++.++||+. +++....
T Consensus 147 DGk~lyVan~~~-----------~~~VsVID~~t~~vv~tI~v~g~~~~------~P~g~~~~~~~~~DG~~-~~v~~~~ 208 (386)
T 3sjl_D 147 DGKTLLFYQFSP-----------APAVGVVDLEGKAFKRMLDVPDCYHI------FPTAPDTFFMHCRDGSL-AKVAFGT 208 (386)
T ss_dssp TSSEEEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEEE------EEEETTEEEEEETTSCE-EEEECCS
T ss_pred CCCEEEEEEcCC-----------CCeEEEEECCCCcEEEEEECCCccee------ecCCCceeEEECCCCCE-EEEECCC
Confidence 999999874321 24688999988765432233322110 001111 2477888875 4443211
Q ss_pred cCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEe-cCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~s-pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
.+. .. ..+.. .++.+ ...... +.|. +||+ ++|.+. ..+++.+|..++ ..+.+.
T Consensus 209 ~g~-v~---~~~~~--~~~~~------------~~~~~~~~~~~~~dG~-~~~vs~----~g~V~v~d~~~~--~~~v~~ 263 (386)
T 3sjl_D 209 EGT-PE---ITHTE--VFHPE------------DEFLINHPAYSQKAGR-LVWPTY----TGKIHQIDLSSG--DAKFLP 263 (386)
T ss_dssp SSC-CE---EEECC--CCSCT------------TSCBCSCCEEETTTTE-EEEEBT----TSEEEEEECTTS--SCEECC
T ss_pred CCe-EE---Eeecc--eeccc------------cccccccceeEcCCCc-EEEEeC----CCEEEEEECCCC--cceeec
Confidence 010 00 00000 01110 011111 4664 7886 455442 347999999774 222221
Q ss_pred ecc------cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccch
Q 004475 342 DRV------FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 415 (751)
Q Consensus 342 ~~~------~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 415 (751)
... ...-+.-.+...++++||++.|+...... ...++...-..|+++|+++++...-+....
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~-----------~~~~hk~~~~~V~viD~~t~kv~~~i~vg~- 331 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR-----------DEWRHKTASRFVVVLDAKTGERLAKFEMGH- 331 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC-----------CTTCTTSCEEEEEEEETTTCCEEEEEEEEE-
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccc-----------cccccCCCCCEEEEEECCCCeEEEEEECCC-
Confidence 111 00000000111266788888887765321 111222233589999999998765544321
Q ss_pred hhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 416 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
....+++|+|++.++|+... ....+.++|..+++..+
T Consensus 332 -----------~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 332 -----------EIDSINVSQDEKPLLYALST--GDKTLYIHDAESGEELR 368 (386)
T ss_dssp -----------EECEEEECSSSSCEEEEEET--TTTEEEEEETTTCCEEE
T ss_pred -----------CcceEEECCCCCeEEEEEcC--CCCeEEEEECCCCcEEE
Confidence 12236899999856655432 24579999999987554
No 357
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.24 E-value=6.4e-11 Score=114.65 Aligned_cols=146 Identities=13% Similarity=0.042 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeEEEEccCCCCCCCCccCcccccccc
Q 004475 578 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYNKTLTPFGFQTEFRTL 652 (751)
Q Consensus 578 ~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~ 652 (751)
.....+++..+++.+.++.. ..++.++||||||.++..++.++ |++++.+|++++.++-..... ....
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---~~~~-- 149 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---TAKT-- 149 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS---SCCC--
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc---cccC--
Confidence 45668899999999987643 46899999999999999999876 678999999998765322110 0000
Q ss_pred hhhHHHHHhcCcccccCCCCCCEEEEEcC----CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC--CCCCcCCccccHH
Q 004475 653 WEATNVYIEMSPITHANKIKKPILIIHGE----VDDKVGLFPMQAERFFDALKGHGALSRLVLLP--FEHHVYAARENVM 726 (751)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~P~li~~G~----~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~H~~~~~~~~~ 726 (751)
.....+... ...+.+ ++|+|+|+|+ .|..|| ...++.+...++..........+. +++|..+. ++.
T Consensus 150 -~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~-e~~- 221 (250)
T 3lp5_A 150 -SMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLP-QNK- 221 (250)
T ss_dssp -HHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHH-HHH-
T ss_pred -HHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcch-hCH-
Confidence 111112111 122333 6999999999 899999 888877777776543444444554 46798763 333
Q ss_pred HHHHHHHHHHHH
Q 004475 727 HVIWETDRWLQK 738 (751)
Q Consensus 727 ~~~~~~~~fl~~ 738 (751)
++.+.+.+||.+
T Consensus 222 ~v~~~I~~FL~~ 233 (250)
T 3lp5_A 222 QIVSLIRQYLLA 233 (250)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHhc
Confidence 778888888854
No 358
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.23 E-value=4.3e-10 Score=122.40 Aligned_cols=219 Identities=6% Similarity=-0.008 Sum_probs=130.3
Q ss_pred CcceeEEeecCCCCCCCCccc-----ccCCCCcccccceeecCC------CCeEEEEEeecccccccCCceeEEEEEcCC
Q 004475 3 FFTGIGIHRLLPDDSLGPEKE-----VHGYPDGAKINFVSWSPD------GKRIAFSVRVDEEDNVSSCKLRVWIADAET 71 (751)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~-----l~~~~~~~~~~~p~~SPD------G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~ 71 (751)
+...|.+|++.+ ++... +.. ....+...+|||+ |+.||..+ ..+.|.++++.+
T Consensus 181 ~D~tI~iWd~~~----~~~~~~~~~~l~~--~~~~V~~v~wsp~~~~~~~~~~LAs~s----------~DgtvrlWd~~~ 244 (524)
T 2j04_B 181 HSSCIQIFKMNT----STLHCVKVQTIVH--SFGEVWDLKWHEGCHAPHLVGCLSFVS----------QEGTINFLEIID 244 (524)
T ss_dssp -CEEEEEEEEET----TTCCEEEEEEEEE--CCCSEEEEEECSSCCCSSSSCEEEEEE----------TTSCEEEEECCC
T ss_pred CCceEEEEEccC----CCCCceEEEEEEe--cCCcEEEEEECCCCCCCCCCceEEEEe----------cCCeEEEEEcCC
Confidence 445688999988 65421 221 1124778899997 56787754 235666677766
Q ss_pred CCee-----ecc----CCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhcc
Q 004475 72 GEAK-----PLF----ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLL 142 (751)
Q Consensus 72 g~~~-----~lt----~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (751)
++.. .+. ....+ ...+..++|+|++ .|+..+.+
T Consensus 245 ~~~~~~~~~~~~~p~~~l~~h--~~~v~sv~~s~~~-~lasgs~D----------------------------------- 286 (524)
T 2j04_B 245 NATDVHVFKMCEKPSLTLSLA--DSLITTFDFLSPT-TVVCGFKN----------------------------------- 286 (524)
T ss_dssp CSSSSSEEECCCSCSEEECCT--TTCEEEEEESSSS-EEEEEETT-----------------------------------
T ss_pred CccccccceeecCceEEEEcC--CCCEEEEEecCCC-eEEEEeCC-----------------------------------
Confidence 5421 110 00111 1246789999876 57766432
Q ss_pred CCccchhhhhhheeeEEEEEcC-CC-Cc-eecCCC-ceEEee--eeCCCC-ceEEEEEecCCcccccccCCCceeEEEEe
Q 004475 143 KDEYDESLFDYYTTAQLVLGSL-DG-TA-KDFGTP-AVYTAV--EPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (751)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~~~~-~G-~~-~~lt~~-~~~~~~--~~SpDG-~~i~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (751)
..|.++|+ ++ .+ ..+..+ ..+..+ .|+||| +.|+..+.+ ..+.+||
T Consensus 287 --------------gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------------~tvklWD 339 (524)
T 2j04_B 287 --------------GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------------GYFYIFN 339 (524)
T ss_dssp --------------SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------------SEEEEEC
T ss_pred --------------CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------------CeEEEEE
Confidence 47788888 45 22 234444 667777 689999 555554433 3688999
Q ss_pred CCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe
Q 004475 216 TDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (751)
Q Consensus 216 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (751)
+.+++.. .+..... ...+..++|||||+. ++..+ ..+.+.++++.. +.....+
T Consensus 340 ~~~~~~~~~~~~~~~-----------~~~v~~v~fsp~~~~-l~s~~------------~d~tv~lwd~~~--~~~~~~l 393 (524)
T 2j04_B 340 PKDIATTKTTVSRFR-----------GSNLVPVVYCPQIYS-YIYSD------------GASSLRAVPSRA--AFAVHPL 393 (524)
T ss_dssp GGGHHHHCEEEEECS-----------CCSCCCEEEETTTTE-EEEEC------------SSSEEEEEETTC--TTCCEEE
T ss_pred CCCCCcccccccccc-----------cCcccceEeCCCcCe-EEEeC------------CCCcEEEEECcc--cccceee
Confidence 8765432 1111100 012457899999987 44432 223677888741 3344566
Q ss_pred EeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 295 HKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 295 ~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
......+. ++|||||+.|+.++. ...|.+.++..
T Consensus 394 ~gH~~~V~sva~Sp~g~~l~Sgs~----Dgtv~lwd~~~ 428 (524)
T 2j04_B 394 VSRETTITAIGVSRLHPMVLAGSA----DGSLIITNAAR 428 (524)
T ss_dssp EECSSCEEEEECCSSCCBCEEEET----TTEEECCBSCS
T ss_pred ecCCCceEEEEeCCCCCeEEEEEC----CCEEEEEechH
Confidence 67777777 999999998876552 23555566544
No 359
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.23 E-value=6.1e-09 Score=121.61 Aligned_cols=89 Identities=10% Similarity=-0.033 Sum_probs=53.7
Q ss_pred ceeEEeecCCCCCCCCcccc---------cCC-CCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe
Q 004475 5 TGIGIHRLLPDDSLGPEKEV---------HGY-PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA 74 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l---------~~~-~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~ 74 (751)
..|.+||+.+ ++.... ..+ .....+...+|||++..++.+. .....| ++|+.+++.
T Consensus 120 g~V~lwd~~~----~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g---------~~dg~v-lWd~~~~~~ 185 (902)
T 2oaj_A 120 GSMIVYDIDR----DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS---------YEYVTL-TYSLVENEI 185 (902)
T ss_dssp SCEEEEETTT----TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE---------CSSCEE-EEETTTTEE
T ss_pred CcEEEEECCC----CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE---------eCCCcE-EEECCCCce
Confidence 4689999988 664211 101 1122588999999764443333 334667 889988775
Q ss_pred eeccCCC------C--------ccccceeeeeEEecCCcEEEEeecC
Q 004475 75 KPLFESP------D--------ICLNAVFGSFVWVNNSTLLIFTIPS 107 (751)
Q Consensus 75 ~~lt~~~------~--------~~~~~~~~~~~wspDg~~l~~~~~~ 107 (751)
.+..... . ......+..++|||||++|+..+.+
T Consensus 186 ~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 186 KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 4332211 0 0001247789999999999887543
No 360
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.22 E-value=4.1e-09 Score=108.35 Aligned_cols=244 Identities=7% Similarity=-0.017 Sum_probs=129.8
Q ss_pred eEEEEEcC-CCCceecC-CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCC
Q 004475 157 AQLVLGSL-DGTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (751)
Q Consensus 157 ~~l~~~~~-~G~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 233 (751)
..|++++. +|+.+.+. .. ..+..++|+|||+.++.. .... .....|++++.+++..+.+.....
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~-~~~~--------~~~~~i~~~d~~~~~~~~~~~~~~---- 132 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCY-LGDF--------KSTGGIFAATENGDNLQDIIEDLS---- 132 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEE-CTTS--------SSCCEEEEECTTSCSCEEEECSSS----
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEe-CCCC--------CCCceEEEEeCCCCEEEEEEccCc----
Confidence 47899999 56666554 23 667889999999754443 2210 012468999998876653322110
Q ss_pred CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceE
Q 004475 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLAL 312 (751)
Q Consensus 234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l 312 (751)
....+..+.++|||+ ++++..... .......|++++.+ ++....+........ +.|+|||+.|
T Consensus 133 ------~~~~~~~i~~d~~g~--l~v~~~~~~-----~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 133 ------TAYCIDDMVFDSKGG--FYFTDFRGY-----STNPLGGVYYVSPD---FRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp ------SCCCEEEEEECTTSC--EEEEECCCB-----TTBCCEEEEEECTT---SCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred ------cCCcccceEECCCCC--EEEEecccc-----ccCCCceEEEEeCC---CCEEEEeecCCCcccceEECCCCCEE
Confidence 012345789999996 455431100 01123578988875 444545444333345 8999999988
Q ss_pred EEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCC
Q 004475 313 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 392 (751)
Q Consensus 313 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (751)
++... ....|++++.++.......+................+++++||+.++... .
T Consensus 197 ~v~~~---~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~---------------------~ 252 (333)
T 2dg1_A 197 WVTET---TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY---------------------G 252 (333)
T ss_dssp EEEEG---GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE---------------------T
T ss_pred EEEeC---CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc---------------------C
Confidence 77652 23478888875320111111100000000000000167888887433322 1
Q ss_pred CceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecC--CCCCeEEEEEcC
Q 004475 393 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK--TEITQYHILSWP 459 (751)
Q Consensus 393 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~l~~~~~~ 459 (751)
...|++||.+ ++....+..... ..........++|++|++.|+++.... .....||.+++.
T Consensus 253 ~~~v~~~d~~-g~~~~~~~~~~~-----~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 253 QGRVLVFNKR-GYPIGQILIPGR-----DEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TTEEEEECTT-SCEEEEEECTTG-----GGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCEEEEECCC-CCEEEEEEcCCC-----ccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 2368888885 443333222110 000000133468899998888776543 224568888865
No 361
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=9e-09 Score=112.64 Aligned_cols=300 Identities=9% Similarity=-0.055 Sum_probs=168.6
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCee-eccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
..+.|+.|...++|+.. .....|+++|+++++.. .+..+. ....+.+||||++|+....+
T Consensus 157 ~~~~~~~d~~~~~~V~~--------~~~~~V~viD~~t~~v~~~i~~g~------~p~~v~~SpDGr~lyv~~~d----- 217 (567)
T 1qks_A 157 TQQMNDWDLENLFSVTL--------RDAGQIALIDGSTYEIKTVLDTGY------AVHISRLSASGRYLFVIGRD----- 217 (567)
T ss_dssp SSCCSCCCGGGEEEEEE--------TTTTEEEEEETTTCCEEEEEECSS------CEEEEEECTTSCEEEEEETT-----
T ss_pred cccccccCCCceEEEEe--------CCCCeEEEEECCCCeEEEEEeCCC------CccceEECCCCCEEEEEcCC-----
Confidence 35778888778888875 45579999999998754 342222 24578999999998876321
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC---CCC-ceecCCCceEEeeeeC----C
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL---DGT-AKDFGTPAVYTAVEPS----P 184 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~G~-~~~lt~~~~~~~~~~S----p 184 (751)
..|.++|+ +++ ..++........++|| |
T Consensus 218 --------------------------------------------g~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~p 253 (567)
T 1qks_A 218 --------------------------------------------GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGW 253 (567)
T ss_dssp --------------------------------------------SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTC
T ss_pred --------------------------------------------CeEEEEECCCCCCcEeEEEecCCCCceeEEccccCC
Confidence 46888888 332 3344334456688999 7
Q ss_pred CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~ 264 (751)
|||++++.... ...+.++|..+.++...............+. ....+..+..|+++.. +++.
T Consensus 254 DGk~l~v~n~~------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~-p~~rva~i~~s~~~~~-~vv~---- 315 (567)
T 1qks_A 254 EDKYAIAGAYW------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYH-PEPRVAAILASHYRPE-FIVN---- 315 (567)
T ss_dssp TTTEEEEEEEE------------TTEEEEEETTTCCEEEEEECCEECTTTCCEE-SCCCEEEEEECSSSSE-EEEE----
T ss_pred CCCEEEEEEcc------------CCeEEEEECCCCcEEEEEecccccccccccc-CCCceEEEEEcCCCCE-EEEE----
Confidence 99999987554 3467788987765443222111000000000 0012346778888876 3332
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEe--eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
+...++|.+++.. ......++. ...... ..|+|||++++.+.+. ...|.++|+.++ +.....
T Consensus 316 -------~~~~g~v~~vd~~---~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~--kl~~~i 380 (567)
T 1qks_A 316 -------VKETGKILLVDYT---DLNNLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEG--KLVAIE 380 (567)
T ss_dssp -------ETTTTEEEEEETT---CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTT--EEEEEE
T ss_pred -------ecCCCeEEEEecC---CCccceeeeeeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCC--cEEEEE
Confidence 1234688888875 211111221 122234 7899999988776632 357889999885 222222
Q ss_pred ec-ccccccCCCCCCCee-eCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc-----eeEEeeccc
Q 004475 342 DR-VFENVYSDPGSPMMT-RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-----KERIWESNR 414 (751)
Q Consensus 342 ~~-~~~~~~~~~~~~~~~-~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-----~~~l~~~~~ 414 (751)
.. .... .++.. .. ++||+..+++..+. ....|.++|.++++ .+.+-....
T Consensus 381 ~vgg~~P---hpg~g-~~~~~p~~g~v~~t~~~-------------------g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 381 DTGGQTP---HPGRG-ANFVHPTFGPVWATSHM-------------------GDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp ECSSSSB---CCTTC-EEEEETTTEEEEEEEBS-------------------SSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred eccCcCC---CCccc-eeeECCCCCcEEEeCCC-------------------CCCeEEEecCCCCCCccccCEEEEEEec
Confidence 22 1110 11211 22 47887777665521 12257777776532 111111100
Q ss_pred hhhhhceeeeecCCcceeeccCCCEEEEEEe-cCC--CCCeEEEEEcCCC
Q 004475 415 EKYFETAVALVFGQGEEDINLNQLKILTSKE-SKT--EITQYHILSWPLK 461 (751)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~--~~~~l~~~~~~~g 461 (751)
.....-.+..+|||++|++... ++. ....|.++|+.+.
T Consensus 438 ---------~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 438 ---------LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp ---------SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred ---------CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 0011122577999998877542 221 1347999998765
No 362
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.21 E-value=3.4e-10 Score=118.71 Aligned_cols=215 Identities=11% Similarity=0.029 Sum_probs=126.6
Q ss_pred CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh------CCeEEEEcCCC
Q 004475 490 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLAGPSI 563 (751)
Q Consensus 490 ~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~G~~v~~~~~~ 563 (751)
+|..|+.....+.. ...|.||++||.+. ....| ......|++ .||.|++ +
T Consensus 93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~--------------s~~~~-~~~~~~L~~~~~~~~~gf~vv~---~ 148 (408)
T 3g02_A 93 EGLTIHFAALFSER------EDAVPIALLHGWPG--------------SFVEF-YPILQLFREEYTPETLPFHLVV---P 148 (408)
T ss_dssp TTEEEEEEEECCSC------TTCEEEEEECCSSC--------------CGGGG-HHHHHHHHHHCCTTTCCEEEEE---E
T ss_pred CCEEEEEEEecCCC------CCCCeEEEECCCCC--------------cHHHH-HHHHHHHhcccccccCceEEEE---E
Confidence 78888888876543 12477999999641 11111 133445665 5999999 6
Q ss_pred CCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475 564 PIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPS-RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 638 (751)
Q Consensus 564 ~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~-~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~ 638 (751)
+.+|+|.+.... .......+++..+++.+ ..+ +++++||||||.+|+.+|.++|+.+..++..++....
T Consensus 149 DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 149 SLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL------GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp CCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHT------TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 667887765432 23445555555555443 234 8999999999999999999997755555544433221
Q ss_pred CCCc--cCccccc---------------c-------------------------------cchh-----hHH--------
Q 004475 639 TLTP--FGFQTEF---------------R-------------------------------TLWE-----ATN-------- 657 (751)
Q Consensus 639 ~~~~--~~~~~~~---------------~-------------------------------~~~~-----~~~-------- 657 (751)
.... ..+.... . ..|. ..+
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 1000 0000000 0 0000 000
Q ss_pred -----------HHHhcCc---cc-------ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 004475 658 -----------VYIEMSP---IT-------HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 716 (751)
Q Consensus 658 -----------~~~~~~~---~~-------~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 716 (751)
.|.+... .. .+..+++|+++++|.+|...+ +.. +.+.. ..-+.+.+++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~~---~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PRS---WIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CHH---HHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cHH---HHHhc---CCeeEEEECCCCc
Confidence 0111000 00 234578999999999997665 332 22222 2247889999999
Q ss_pred CcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475 717 HVYAARENVMHVIWETDRWLQKYCLSN 743 (751)
Q Consensus 717 H~~~~~~~~~~~~~~~~~fl~~~l~~~ 743 (751)
|... .+..+.+...+.+||...-..+
T Consensus 375 Hf~~-lE~Pe~~~~~l~~fl~~~~~~~ 400 (408)
T 3g02_A 375 HFAA-LERPRELKTDLTAFVEQVWQKG 400 (408)
T ss_dssp SCHH-HHCHHHHHHHHHHHHHHHC---
T ss_pred Cchh-hhCHHHHHHHHHHHHHHHHHcC
Confidence 9876 6778899999999998765443
No 363
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.21 E-value=2.2e-09 Score=109.02 Aligned_cols=258 Identities=9% Similarity=0.074 Sum_probs=152.7
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPD 82 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~ 82 (751)
...|++|++.+ ++...... .....+...+|||||+.|+... ....|.++++..... +.+.....
T Consensus 38 dg~v~vw~~~~----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 38 DGTVRLWSKDD----QWLGTVVY-TGQGFLNSVCYDSEKELLLFGG----------KDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp TSEEEEEEESS----SEEEEEEE-ECSSCEEEEEEETTTTEEEEEE----------TTSCEEEEETTCCTTSCC-CEECC
T ss_pred CCcEEEEECCC----CEEEEEee-cCCccEEEEEECCCCCEEEEec----------CCCeEEEEEeeecCCCCcccchhh
Confidence 34699999977 76554432 2233688999999999998864 335666666655421 11111111
Q ss_pred ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (751)
+ ...+..+.| +++.|+..+.+ ..|.++
T Consensus 103 ~--~~~i~~~~~--~~~~l~~~~~d-------------------------------------------------~~i~~~ 129 (313)
T 3odt_A 103 H--QGNVCSLSF--QDGVVISGSWD-------------------------------------------------KTAKVW 129 (313)
T ss_dssp C--SSCEEEEEE--ETTEEEEEETT-------------------------------------------------SEEEEE
T ss_pred c--ccCEEEEEe--cCCEEEEEeCC-------------------------------------------------CCEEEE
Confidence 1 113556677 67777766432 356666
Q ss_pred cCCC-CceecCCC-ceEEeeeeCC-CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475 163 SLDG-TAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 163 ~~~G-~~~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 239 (751)
+ .+ ....+..+ ..+..+.|+| +++.|+....+ ..+.+||... ....+...
T Consensus 130 d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~-~~~~~~~~------------ 182 (313)
T 3odt_A 130 K-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD-------------KTIKLWQNDK-VIKTFSGI------------ 182 (313)
T ss_dssp E-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT-------------SCEEEEETTE-EEEEECSS------------
T ss_pred c-CCcEEEecccCCCceeEEEEccCCCCEEEEEECC-------------CCEEEEecCc-eEEEEecc------------
Confidence 6 34 33444444 6777888888 88888776543 3578888432 22222110
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY 318 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~ 318 (751)
....+..+.|+|+|+ ++... ..+.|+++++.. +.....+......+. +.|+|+|+ |+...
T Consensus 183 ~~~~i~~~~~~~~~~--~~~~~------------~dg~i~i~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~-- 243 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH--FISCS------------NDGLIKLVDMHT--GDVLRTYEGHESFVYCIKLLPNGD-IVSCG-- 243 (313)
T ss_dssp CSSCEEEEEEEETTE--EEEEE------------TTSEEEEEETTT--CCEEEEEECCSSCEEEEEECTTSC-EEEEE--
T ss_pred CcccEEEEEEcCCCe--EEEcc------------CCCeEEEEECCc--hhhhhhhhcCCceEEEEEEecCCC-EEEEe--
Confidence 123356899999998 33332 235788888851 223344444566677 99999995 55433
Q ss_pred cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEE
Q 004475 319 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL 398 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 398 (751)
....|.+.++.++ ............+.. ++|+|||+ ++..+. ...|++
T Consensus 244 --~dg~v~iwd~~~~--~~~~~~~~~~~~i~~------~~~~~~~~-~~~~~~---------------------dg~i~i 291 (313)
T 3odt_A 244 --EDRTVRIWSKENG--SLKQVITLPAISIWS------VDCMSNGD-IIVGSS---------------------DNLVRI 291 (313)
T ss_dssp --TTSEEEEECTTTC--CEEEEEECSSSCEEE------EEECTTSC-EEEEET---------------------TSCEEE
T ss_pred --cCCEEEEEECCCC--ceeEEEeccCceEEE------EEEccCCC-EEEEeC---------------------CCcEEE
Confidence 2357888888774 333333222222222 78999998 444441 236888
Q ss_pred EecCCCcee
Q 004475 399 FDINTGSKE 407 (751)
Q Consensus 399 ~d~~~g~~~ 407 (751)
|++.+++..
T Consensus 292 w~~~~~~~~ 300 (313)
T 3odt_A 292 FSQEKSRWA 300 (313)
T ss_dssp EESCGGGCC
T ss_pred EeCCCCcee
Confidence 999876543
No 364
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.19 E-value=1.3e-08 Score=109.88 Aligned_cols=283 Identities=8% Similarity=0.005 Sum_probs=163.9
Q ss_pred eecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCC
Q 004475 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (751)
Q Consensus 37 ~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 116 (751)
.+++||++|+..+ ..+.|.++++.+++......+... .+..++|+|++ .|+..+.+
T Consensus 127 ~~~~~~~~l~sgs----------~dg~i~vwd~~~~~~~~~~~~h~~----~V~~l~~~~~~-~l~s~s~d--------- 182 (464)
T 3v7d_B 127 CLQFEDNYVITGA----------DDKMIRVYDSINKKFLLQLSGHDG----GVWALKYAHGG-ILVSGSTD--------- 182 (464)
T ss_dssp EEEEETTEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS----CEEEEEECSTT-EEEEEETT---------
T ss_pred EEEECCCEEEEEc----------CCCcEEEEECCCCcEEEEEeCCCc----CEEEEEEcCCC-EEEEEeCC---------
Confidence 5777888887753 346788889888875443332221 47889999999 56555332
Q ss_pred CCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeC--CCCceEEE
Q 004475 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPS--PDQKYVLI 191 (751)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~S--pDG~~i~~ 191 (751)
..|.++|+ +|+ ...+..+ ..+..++|+ +|+++|+.
T Consensus 183 ----------------------------------------g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s 222 (464)
T 3v7d_B 183 ----------------------------------------RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT 222 (464)
T ss_dssp ----------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEE
T ss_pred ----------------------------------------CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEE
Confidence 46777888 663 3444434 667777777 68888877
Q ss_pred EEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC--------CCC---CccCCccCCCceeeeecCCCceEEEE
Q 004475 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE--------DIP---VCYNSVREGMRSISWRADKPSTLYWV 260 (751)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~--------~~~---~~~~~~~~~~~~~~~spdG~~~i~~~ 260 (751)
.+.+ ..+.+||+.++............ ..+ ..+.. ....-..++++++. ++..
T Consensus 223 ~s~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~ 286 (464)
T 3v7d_B 223 GSRD-------------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG--HMASVRTVSGHGNI-VVSG 286 (464)
T ss_dssp EETT-------------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC--CSSCEEEEEEETTE-EEEE
T ss_pred EcCC-------------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC--ccceEEEEcCCCCE-EEEE
Confidence 6543 35888998765432111000000 000 00001 11123456888887 5554
Q ss_pred EeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee
Q 004475 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 339 (751)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (751)
. ..+.|.++++.. +.....+......+. +.|+|+|+.|+.++. ...|.+.++.++ ....
T Consensus 287 ~------------~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~--~~~~ 346 (464)
T 3v7d_B 287 S------------YDNTLIVWDVAQ--MKCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIWDLENG--ELMY 346 (464)
T ss_dssp E------------TTSCEEEEETTT--TEEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEEETTTT--EEEE
T ss_pred e------------CCCeEEEEECCC--CcEEEEecCCCCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--cEEE
Confidence 3 235788888851 222333334455666 999999998887652 245777777764 2222
Q ss_pred eeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhh
Q 004475 340 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 419 (751)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 419 (751)
........+.. ++|+ ++.|+..+.+ ..|.+||+.+++.........
T Consensus 347 ~~~~h~~~v~~------~~~~--~~~l~s~s~d---------------------g~v~vwd~~~~~~~~~~~~~~----- 392 (464)
T 3v7d_B 347 TLQGHTALVGL------LRLS--DKFLVSAAAD---------------------GSIRGWDANDYSRKFSYHHTN----- 392 (464)
T ss_dssp EECCCSSCEEE------EEEC--SSEEEEEETT---------------------SEEEEEETTTCCEEEEEECTT-----
T ss_pred EEeCCCCcEEE------EEEc--CCEEEEEeCC---------------------CcEEEEECCCCceeeeecCCC-----
Confidence 22222222211 4454 6777776632 278999998776443332211
Q ss_pred ceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 420 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 420 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
.....+++++++.++... -+.+.++|+.+|+..+
T Consensus 393 -------~~~~~~~~~~~~~l~~~~-----dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 393 -------LSAITTFYVSDNILVSGS-----ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------CCCEEEEEECSSEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred -------CccEEEEEeCCCEEEEec-----CCeEEEEECCCCcEEe
Confidence 112257899998776543 2579999999887654
No 365
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.18 E-value=2.4e-09 Score=108.02 Aligned_cols=256 Identities=9% Similarity=0.024 Sum_probs=148.5
Q ss_pred CCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCC
Q 004475 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (751)
Q Consensus 19 g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg 98 (751)
.+.+.+.. .......|+|+|||+.|+++. .....|++++++++ .+.+..... ....++++|||
T Consensus 18 ~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~---------~~~~~i~~~~~~~~-~~~~~~~~~-----~~~~l~~~~dg 80 (296)
T 3e5z_A 18 AEARRLAD--GFTWTEGPVYVPARSAVIFSD---------VRQNRTWAWSDDGQ-LSPEMHPSH-----HQNGHCLNKQG 80 (296)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEE---------GGGTEEEEEETTSC-EEEEESSCS-----SEEEEEECTTC
T ss_pred CcEEEEec--CCccccCCeEeCCCCEEEEEe---------CCCCEEEEEECCCC-eEEEECCCC-----CcceeeECCCC
Confidence 45555542 222456899999999888875 33468999999888 666543322 25678999999
Q ss_pred cEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC---
Q 004475 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--- 174 (751)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~--- 174 (751)
+.++.... ...|++++. +|+.+.+...
T Consensus 81 ~l~v~~~~-------------------------------------------------~~~i~~~d~~~g~~~~~~~~~~~ 111 (296)
T 3e5z_A 81 HLIACSHG-------------------------------------------------LRRLERQREPGGEWESIADSFEG 111 (296)
T ss_dssp CEEEEETT-------------------------------------------------TTEEEEECSTTCCEEEEECEETT
T ss_pred cEEEEecC-------------------------------------------------CCeEEEEcCCCCcEEEEeeccCC
Confidence 85543311 046888998 8876655332
Q ss_pred ---ceEEeeeeCCCCceEEEEEec-CC---cc-cccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCce
Q 004475 175 ---AVYTAVEPSPDQKYVLITSMH-RP---YS-YKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRS 246 (751)
Q Consensus 175 ---~~~~~~~~SpDG~~i~~~~~~-~~---~~-~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 246 (751)
.....++++|||+ |+++... .. .. ...........||.++.+ ++.+.+.... .....
T Consensus 112 ~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~g 176 (296)
T 3e5z_A 112 KKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPNG 176 (296)
T ss_dssp EECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEEE
T ss_pred CCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCcc
Confidence 1234689999997 4554211 00 00 000000012478899887 4444432211 12347
Q ss_pred eeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC---ceEeEeeceeEE-EEEecCCceEEEeeeecccc
Q 004475 247 ISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 247 ~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
++|+|||+. + ++.. ..+.|++++++ .++.. ...+........ +.+++||+ |+.+. .
T Consensus 177 i~~s~dg~~-l-v~~~-----------~~~~i~~~~~~-~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~-----~ 236 (296)
T 3e5z_A 177 LAFLPSGNL-L-VSDT-----------GDNATHRYCLN-ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA-----G 236 (296)
T ss_dssp EEECTTSCE-E-EEET-----------TTTEEEEEEEC-SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-----T
T ss_pred EEECCCCCE-E-EEeC-----------CCCeEEEEEEC-CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-----C
Confidence 899999997 5 5431 23478888874 11221 112211122234 78999998 44433 2
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeee-CCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR-TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 401 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 401 (751)
..|++++.++. ....+..... ... ++| +|||+.|++.+. ..|++++.
T Consensus 237 ~~v~~~~~~g~--~~~~~~~~~~--~~~------~~f~~~d~~~L~v~t~----------------------~~l~~~~~ 284 (296)
T 3e5z_A 237 DGVHVLTPDGD--ELGRVLTPQT--TSN------LCFGGPEGRTLYMTVS----------------------TEFWSIET 284 (296)
T ss_dssp TEEEEECTTSC--EEEEEECSSC--CCE------EEEESTTSCEEEEEET----------------------TEEEEEEC
T ss_pred CeEEEECCCCC--EEEEEECCCC--cee------EEEECCCCCEEEEEcC----------------------CeEEEEEc
Confidence 46888998752 2222221111 111 667 689998888772 26899999
Q ss_pred CCCcee
Q 004475 402 NTGSKE 407 (751)
Q Consensus 402 ~~g~~~ 407 (751)
++++++
T Consensus 285 ~~~~~~ 290 (296)
T 3e5z_A 285 NVRGLE 290 (296)
T ss_dssp SCCBCC
T ss_pred cccccc
Confidence 877654
No 366
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=8.9e-09 Score=107.50 Aligned_cols=309 Identities=12% Similarity=0.059 Sum_probs=159.1
Q ss_pred cCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCC
Q 004475 39 SPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMV 118 (751)
Q Consensus 39 SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 118 (751)
.||++++ |+.+.. .......|.++|+++++...-..... .- .+++||||++|+.........
T Consensus 81 ~~~~~~v-yV~n~~----~~~~~~~VsVID~~t~~vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~~~~------- 142 (426)
T 3c75_H 81 APDARRV-YIQDPA----HFAAITQQFVIDGSTGRILGMTDGGF-----LP-HPVAAEDGSFFAQASTVFERI------- 142 (426)
T ss_dssp CCCTTEE-EEEECT----TTCSSEEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEET-------
T ss_pred CCCCCEE-EEECCC----cCCCCCeEEEEECCCCEEEEEEECCC-----CC-ceEECCCCCEEEEEecccccc-------
Confidence 3788775 554311 00111799999999887443222121 12 679999999998874210000
Q ss_pred CCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecC-C-------CceEEeeeeCCCCce
Q 004475 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-T-------PAVYTAVEPSPDQKY 188 (751)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt-~-------~~~~~~~~~SpDG~~ 188 (751)
........|.++|. +++. ..+. . ......+.+||||++
T Consensus 143 --------------------------------~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 143 --------------------------------ARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp --------------------------------TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE
T ss_pred --------------------------------ccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 00001257888998 6643 2331 1 123357899999999
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++..... ...+.++|+.+.+...-...+.... ........-+++++||+. +++.. ..+ ..
T Consensus 191 lyV~n~~~-----------~~~VsVID~~t~kvv~~I~v~g~~~-----~~p~g~~~~v~~~~dG~~-~~V~~-~~~-~v 251 (426)
T 3c75_H 191 LLFYQFSP-----------APAVGVVDLEGKTFDRMLDVPDCYH-----IFPASPTVFYMNCRDGSL-ARVDF-ADG-ET 251 (426)
T ss_dssp EEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEE-----EEEEETTEEEEEETTSSE-EEEEC-CTT-CC
T ss_pred EEEEecCC-----------CCeEEEEECCCCeEEEEEEcCCcee-----eccCCCcEEEEEcCCCCE-EEEEC-CCC-cE
Confidence 99874321 3468899998776542212211100 000000112456666654 33321 100 00
Q ss_pred ccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc---
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV--- 344 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~--- 344 (751)
.. +.. ..++.+ . ..... +.+++|++.++|.+. ...++++|..+. ..+.+....
T Consensus 252 ~~----~~~-~~~~v~---~---------~p~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~--~~~v~~~~~~~~ 308 (426)
T 3c75_H 252 KV----TNT-EVFHTE---D---------ELLINHPAFSLRSGRLVWPTY----TGKIFQADLTAE--GATFRAPIEALT 308 (426)
T ss_dssp EE----EEC-CCCSCT---T---------SCBCSCCEECTTTCEEEEEBT----TSEEEEEEECSS--CEEECCCEESSC
T ss_pred EE----Eee-eeeccC---C---------CceeeEeeecCCCCEEEEEeC----CCcEEEEeccCC--ceEEeeeeeecc
Confidence 00 000 111211 0 00111 578999999988763 247999998763 211111100
Q ss_pred --cccc-cCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhce
Q 004475 345 --FENV-YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 421 (751)
Q Consensus 345 --~~~~-~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 421 (751)
.... +.-.+...++++|||+.|++..... ...++......|.++|+++++...-+....
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~-----------~~gthk~~s~~VsVID~~T~kvv~~I~vg~------- 370 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQR-----------DEWKHKAASRFVVVLNAETGERINKIELGH------- 370 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC-----------CTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEeccc-----------ccccccCCCCEEEEEECCCCeEEEEEECCC-------
Confidence 0000 0000111267899998887765210 000111123479999999987755443321
Q ss_pred eeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 422 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 422 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
.+..++|+|||+.++|+.... ...+.++|+.+++..
T Consensus 371 -----~P~gia~spDg~~~lyv~n~~--s~~VsVID~~t~kvv 406 (426)
T 3c75_H 371 -----EIDSINVSQDAEPLLYALSAG--TQTLHIYDAATGEEL 406 (426)
T ss_dssp -----EECEEEECCSSSCEEEEEETT--TTEEEEEETTTCCEE
T ss_pred -----CcCeEEEccCCCEEEEEEcCC--CCeEEEEECCCCCEE
Confidence 133468999999555554321 357999999998765
No 367
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.18 E-value=1.7e-08 Score=101.72 Aligned_cols=229 Identities=9% Similarity=0.019 Sum_probs=127.6
Q ss_pred eEEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475 157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (751)
Q Consensus 157 ~~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (751)
..|++++.++..+.+... .....++++|||+.+ +.... ...|++|+..+++.+.+......
T Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~-v~~~~------------~~~i~~~d~~~g~~~~~~~~~~~----- 111 (296)
T 3e5z_A 50 NRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLI-ACSHG------------LRRLERQREPGGEWESIADSFEG----- 111 (296)
T ss_dssp TEEEEEETTSCEEEEESSCSSEEEEEECTTCCEE-EEETT------------TTEEEEECSTTCCEEEEECEETT-----
T ss_pred CEEEEEECCCCeEEEECCCCCcceeeECCCCcEE-EEecC------------CCeEEEEcCCCCcEEEEeeccCC-----
Confidence 478999985445555544 567789999999854 43221 23688999976666554321100
Q ss_pred ccCCccCCCceeeeecCCCceEEEEEeccCC------CCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecC
Q 004475 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRG------DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDD 308 (751)
Q Consensus 236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spd 308 (751)
.....+..++++|||+ ++++....+. .........+.||.++.+ +....+........ ++|+||
T Consensus 112 ---~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 112 ---KKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----GTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp ---EECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----SCEEEEECCCSSEEEEEECTT
T ss_pred ---CCCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEECCC----CCEEEeecCCCCCccEEECCC
Confidence 0011245789999997 5554311000 000001113478888763 33444444333445 899999
Q ss_pred CceEEEeeeecccceeEEEecCCCCCCcc---eeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGSKDVAP---RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 385 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~ 385 (751)
|+.| ++. .....|++++++.. +.. ..+...... ..-.+++++||+ |++.. .
T Consensus 183 g~~l-v~~---~~~~~i~~~~~~~~-g~~~~~~~~~~~~~~------~p~~i~~d~~G~-l~v~~-~------------- 236 (296)
T 3e5z_A 183 GNLL-VSD---TGDNATHRYCLNAR-GETEYQGVHFTVEPG------KTDGLRVDAGGL-IWASA-G------------- 236 (296)
T ss_dssp SCEE-EEE---TTTTEEEEEEECSS-SCEEEEEEEECCSSS------CCCSEEEBTTSC-EEEEE-T-------------
T ss_pred CCEE-EEe---CCCCeEEEEEECCC-CcCcCCCeEeeCCCC------CCCeEEECCCCC-EEEEc-C-------------
Confidence 9988 544 22357888877521 222 222211111 111278899997 33333 1
Q ss_pred CCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceee-ccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 386 GFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 386 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
..|++|+.+ |+......... . ...++| ++|++.|+.+. ...||++++.+++.+
T Consensus 237 --------~~v~~~~~~-g~~~~~~~~~~-----------~-~~~~~f~~~d~~~L~v~t-----~~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 237 --------DGVHVLTPD-GDELGRVLTPQ-----------T-TSNLCFGGPEGRTLYMTV-----STEFWSIETNVRGLE 290 (296)
T ss_dssp --------TEEEEECTT-SCEEEEEECSS-----------C-CCEEEEESTTSCEEEEEE-----TTEEEEEECSCCBCC
T ss_pred --------CeEEEECCC-CCEEEEEECCC-----------C-ceeEEEECCCCCEEEEEc-----CCeEEEEEccccccc
Confidence 268888886 44433322221 1 223567 58888888775 247999998776544
No 368
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.17 E-value=1.3e-08 Score=109.94 Aligned_cols=257 Identities=11% Similarity=0.052 Sum_probs=151.5
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|.+||+.+ ++...... .....+...+|+||+ .|+.. ...+.|.++++.+++..........
T Consensus 141 dg~i~vwd~~~----~~~~~~~~-~h~~~V~~l~~~~~~-~l~s~----------s~dg~i~vwd~~~~~~~~~~~~h~~ 204 (464)
T 3v7d_B 141 DKMIRVYDSIN----KKFLLQLS-GHDGGVWALKYAHGG-ILVSG----------STDRTVRVWDIKKGCCTHVFEGHNS 204 (464)
T ss_dssp TSCEEEEETTT----TEEEEEEC-CCSSCEEEEEECSTT-EEEEE----------ETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCcEEEEECCC----CcEEEEEe-CCCcCEEEEEEcCCC-EEEEE----------eCCCCEEEEECCCCcEEEEECCCCC
Confidence 45799999988 76554321 233368899999999 55553 3346788889988875554332221
Q ss_pred cccceeeeeEEe--cCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 84 CLNAVFGSFVWV--NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 84 ~~~~~~~~~~ws--pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.+..++|+ |+++.|+..+.++ .|.+
T Consensus 205 ----~v~~l~~~~~~~~~~l~s~s~d~-------------------------------------------------~i~v 231 (464)
T 3v7d_B 205 ----TVRCLDIVEYKNIKYIVTGSRDN-------------------------------------------------TLHV 231 (464)
T ss_dssp ----CEEEEEEEESSSCEEEEEEETTS-------------------------------------------------CEEE
T ss_pred ----ccEEEEEecCCCCCEEEEEcCCC-------------------------------------------------cEEE
Confidence 36677787 5788888775432 2223
Q ss_pred EcC-CCC------------------------ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEe
Q 004475 162 GSL-DGT------------------------AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (751)
Q Consensus 162 ~~~-~G~------------------------~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d 215 (751)
+++ +++ ...+..+ ..+ ..++++|++|+....+ ..+.+||
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d-------------~~i~vwd 296 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYD-------------NTLIVWD 296 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETT-------------SCEEEEE
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCC-------------CeEEEEE
Confidence 333 111 1111111 222 2357889888876543 3588999
Q ss_pred CCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE
Q 004475 216 TDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (751)
Q Consensus 216 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 295 (751)
+.+++...... .....+..+.|+|||+. ++..+ ..+.|+++++.. +.....+.
T Consensus 297 ~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~-l~sg~------------~dg~i~vwd~~~--~~~~~~~~ 349 (464)
T 3v7d_B 297 VAQMKCLYILS------------GHTDRIYSTIYDHERKR-CISAS------------MDTTIRIWDLEN--GELMYTLQ 349 (464)
T ss_dssp TTTTEEEEEEC------------CCSSCEEEEEEETTTTE-EEEEE------------TTSCEEEEETTT--TEEEEEEC
T ss_pred CCCCcEEEEec------------CCCCCEEEEEEcCCCCE-EEEEe------------CCCcEEEEECCC--CcEEEEEe
Confidence 98765432211 12234568999999998 55543 235788888751 22233343
Q ss_pred eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecC
Q 004475 296 KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 374 (751)
Q Consensus 296 ~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 374 (751)
.....+. +.|+ ++.|+..+. ...|.+.++.+. ....... .... ....+|++||+.|+..+ +
T Consensus 350 ~h~~~v~~~~~~--~~~l~s~s~----dg~v~vwd~~~~--~~~~~~~-~~~~------~~~~~~~~~~~~l~~~~-d-- 411 (464)
T 3v7d_B 350 GHTALVGLLRLS--DKFLVSAAA----DGSIRGWDANDY--SRKFSYH-HTNL------SAITTFYVSDNILVSGS-E-- 411 (464)
T ss_dssp CCSSCEEEEEEC--SSEEEEEET----TSEEEEEETTTC--CEEEEEE-CTTC------CCEEEEEECSSEEEEEE-T--
T ss_pred CCCCcEEEEEEc--CCEEEEEeC----CCcEEEEECCCC--ceeeeec-CCCC------ccEEEEEeCCCEEEEec-C--
Confidence 4455566 7776 566665542 245666777664 2122111 1111 11267999999887766 1
Q ss_pred CcceEEEEccCCCCCCCCCceeEEEecCCCceeE
Q 004475 375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 408 (751)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 408 (751)
..|.+||+.+|+...
T Consensus 412 -------------------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 -------------------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------------------TEEEEEETTTCCEEE
T ss_pred -------------------CeEEEEECCCCcEEe
Confidence 278999999887643
No 369
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.15 E-value=1.1e-08 Score=106.07 Aligned_cols=314 Identities=9% Similarity=-0.018 Sum_probs=153.7
Q ss_pred CCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCC
Q 004475 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVP 119 (751)
Q Consensus 40 PDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 119 (751)
||++++ |+.+.. ........|+++|+++++......... .- .+++||||++|+..........
T Consensus 13 ~~~~~~-yv~~~~---~~~~~d~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spdg~~lyv~~~~~~~~~------- 75 (361)
T 2oiz_A 13 PQENRI-YVMDSV---FMHLTESRVHVYDYTNGKFLGMVPTAF-----NG-HVQVSNDGKKIYTMTTYHERIT------- 75 (361)
T ss_dssp CGGGEE-EEEECC---GGGGGGCEEEEEETTTCCEEEEEECCE-----EE-EEEECTTSSEEEEEEEEETTSS-------
T ss_pred CCCCEE-EEECCC---CCccccCeEEEEECCCCeEEEEecCCC-----CC-ceEECCCCCEEEEEEecccccc-------
Confidence 578775 544311 011224689999998887543222111 12 7899999999988743100000
Q ss_pred CCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecC--C-----CceEEeeeeCCCCceEE
Q 004475 120 LGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG--T-----PAVYTAVEPSPDQKYVL 190 (751)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt--~-----~~~~~~~~~SpDG~~i~ 190 (751)
.+ .....|.++|+ +++. ..+. . ......+++||||++|+
T Consensus 76 ---------~g-----------------------~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 76 ---------RG-----------------------KRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp ---------SS-----------------------CEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred ---------cC-----------------------CCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 00 01145778888 5533 2221 1 12345789999999999
Q ss_pred EEEecCCcccccccCCCceeEEEEeCCCceeeee-ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (751)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~ 269 (751)
+..... ...+.+||+++++...- ...+.... ..+... ...+-++.++||+. +++....++ ...
T Consensus 124 v~n~~~-----------~~~v~v~d~~~~~~~~~~i~~~~~~~--v~~~p~-~~~~~~~~~~dg~~-~~v~~~~~g-~~~ 187 (361)
T 2oiz_A 124 LQNASP-----------ATSIGIVDVAKGDYVEDVTAAAGCWS--VIPQPN-RPRSFMTICGDGGL-LTINLGEDG-KVA 187 (361)
T ss_dssp EEEESS-----------SEEEEEEETTTTEEEEEEGGGTTEEE--EEECTT-SSSEEEEEETTSSE-EEEEECTTS-SEE
T ss_pred EECCCC-----------CCeEEEEECCCCcEEEEEecCCCcce--eEEcCC-CCeeEEEECCCCcE-EEEEECCCC-cEe
Confidence 875421 24688999987654321 11111100 000000 01123455666654 333211000 000
Q ss_pred cccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-----
Q 004475 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV----- 344 (751)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~----- 344 (751)
.. . ....+++.. ........++||+.+++.+. ...++.++..+. ....+....
T Consensus 188 -~~-~-~~~~~~~~~-------------~~~~~~~~~~~g~~~~~~~~----~~~v~v~d~~~~--~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 188 -SQ-S-RSKQMFSVK-------------DDPIFIAPALDKDKAHFVSY----YGNVYSADFSGD--EVKVDGPWSLLNDE 245 (361)
T ss_dssp -EE-E-ECCCCSCTT-------------TSCBCSCCEECSSEEEEEBT----TSEEEEEECSSS--SCEEEEEEESCCHH
T ss_pred -ee-c-cccceEcCC-------------CCceEEEecccCCEEEEEeC----CCeEEEEEecCC--CceecccccccCcc
Confidence 00 0 000011110 00011234788888777652 246888888663 212111100
Q ss_pred -cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceee
Q 004475 345 -FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 423 (751)
Q Consensus 345 -~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 423 (751)
....+...+...++++|||+.++...... ..++. .......|++||+++++...-....
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~---------~~~~~-~~~~~~~v~viD~~t~~~v~~i~~~---------- 305 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPD---------GKEGT-HKFPAAEIWVMDTKTKQRVARIPGR---------- 305 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESS---------CCTTC-TTCCCSEEEEEETTTTEEEEEEECT----------
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccC---------CCccc-ccCCCceEEEEECCCCcEEEEEecC----------
Confidence 00000000111267899998877655200 00000 1112348999999988764433221
Q ss_pred eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 004475 424 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 468 (751)
Q Consensus 424 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~ 468 (751)
. +..++|||||++|+.+ . . ..+.++|+.+++++.+..
T Consensus 306 --~-p~~ia~spdg~~l~v~-n---~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 306 --D-ALSMTIDQQRNLMLTL-D---G-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp --T-CCEEEEETTTTEEEEE-C---S-SCEEEEECSSSSCEEEEE
T ss_pred --C-eeEEEECCCCCEEEEe-C---C-CeEEEEECCCCcceeeEE
Confidence 1 4457999999966543 2 2 679999999984444433
No 370
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.15 E-value=7.4e-11 Score=119.34 Aligned_cols=212 Identities=10% Similarity=-0.082 Sum_probs=120.2
Q ss_pred ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCC
Q 004475 492 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 571 (751)
Q Consensus 492 ~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~ 571 (751)
..+...++.|..+..+ ..+.||++||.+.. ... .|...+...|.++||.|+.+ +++|+|.+
T Consensus 14 ~~l~~~i~~p~~~~~~---~~~~VvllHG~~~~-----------~~~--~~~~~l~~~L~~~G~~v~~~---d~~g~g~~ 74 (317)
T 1tca_A 14 SVLDAGLTCQGASPSS---VSKPILLVPGTGTT-----------GPQ--SFDSNWIPLSTQLGYTPCWI---SPPPFMLN 74 (317)
T ss_dssp HHHHHTEEETTBCTTS---CSSEEEEECCTTCC-----------HHH--HHTTTHHHHHHTTTCEEEEE---CCTTTTCS
T ss_pred HHHhheeeCCCCCCCC---CCCeEEEECCCCCC-----------cch--hhHHHHHHHHHhCCCEEEEE---CCCCCCCC
Confidence 3455667777654322 24679999996411 111 01113456777889999994 45566543
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCCCCCCCCcc-----
Q 004475 572 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTPF----- 643 (751)
Q Consensus 572 ~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~d~~~~~~----- 643 (751)
. .....+++.+.++++.+... ..++.++||||||.++..++...| ++++++|++++.........
T Consensus 75 ~-----~~~~~~~l~~~i~~~~~~~g--~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~~ 147 (317)
T 1tca_A 75 D-----TQVNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDAL 147 (317)
T ss_dssp C-----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHT
T ss_pred c-----HHHHHHHHHHHHHHHHHHhC--CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhhh
Confidence 1 23446777888888876532 368999999999999999888765 78999999998754221100
Q ss_pred C-cccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHH--HHHHHHHHHhCCCcEEEEEe-------C
Q 004475 644 G-FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ--AERFFDALKGHGALSRLVLL-------P 713 (751)
Q Consensus 644 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~--~~~~~~~l~~~~~~~~~~~~-------~ 713 (751)
. .................... .......+|+++++|+.|.+|+ +.. +......+.. . +...+ +
T Consensus 148 ~~~~~~~~~~~~~s~f~~~L~~-~~~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~~--a--~~~~~~~~~~~~~ 220 (317)
T 1tca_A 148 AVSAPSVWQQTTGSALTTALRN-AGGLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLFN--G--KNVQAQAVCGPLF 220 (317)
T ss_dssp TCBCHHHHHTBTTCHHHHHHHH-TTTTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCBT--S--EEEEHHHHHCTTC
T ss_pred hhcCchHHhhCcCcHHHHHHHh-cCCCCCCCCEEEEEeCCCCeEC--CccccccchhhhccC--C--ccEEeeeccCCCC
Confidence 0 00000000000000111000 0001246899999999999987 443 1111111211 1 22222 5
Q ss_pred CCCCcCCccccHHHHHHHHHHHHHH
Q 004475 714 FEHHVYAARENVMHVIWETDRWLQK 738 (751)
Q Consensus 714 ~~~H~~~~~~~~~~~~~~~~~fl~~ 738 (751)
+.+|.... .+. ..+..+++||+.
T Consensus 221 ~~gH~~~l-~~p-~~~~~v~~~L~~ 243 (317)
T 1tca_A 221 VIDHAGSL-TSQ-FSYVVGRSALRS 243 (317)
T ss_dssp CCCTTHHH-HBH-HHHHHHHHHHHC
T ss_pred ccCccccc-CCH-HHHHHHHHHhcC
Confidence 78898643 222 456788999986
No 371
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=1.2e-08 Score=102.78 Aligned_cols=223 Identities=8% Similarity=-0.050 Sum_probs=125.2
Q ss_pred eEEEEEcC-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475 157 AQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (751)
Q Consensus 157 ~~l~~~~~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (751)
..|++++. +++.+.+.....+..++++|||+ |++.. . ..|+++|.++++.+.+...... .+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~-------------~~l~~~d~~~g~~~~~~~~~~~--~~- 96 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G-------------TKFCALNWKEQSAVVLATVDND--KK- 96 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T-------------TEEEEEETTTTEEEEEEECCTT--CS-
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C-------------CeEEEEECCCCcEEEEEecCCC--CC-
Confidence 47899998 45555554446677899999999 44442 1 2588999988877766443211 00
Q ss_pred ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEE
Q 004475 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVN 314 (751)
Q Consensus 236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~ 314 (751)
...+..+.++|||+ +++................+.||.++.+ + ....+........ ++|+|||+.|++
T Consensus 97 -----~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g-~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 97 -----NNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFPD---H-HVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp -----SEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECTT---S-CEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred -----CCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEECC---C-CEEEEeeccccccceEEcCCCCEEEE
Confidence 11245789999998 4554322111100011233578888864 3 3333333333334 899999998877
Q ss_pred eeeecccceeEEEecCC--CCCCc-ceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCC
Q 004475 315 ETWYKTSQTRTWLVCPG--SKDVA-PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEG 391 (751)
Q Consensus 315 ~~~~~~~~~~l~~~~~~--~~~~~-~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (751)
... ....|++++.+ ++... .+.+....... . ..-.+++++||+ |++....
T Consensus 166 ~~~---~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~--~--~p~g~~~d~~G~-lwva~~~------------------- 218 (297)
T 3g4e_A 166 IDS---LSYSVDAFDYDLQTGQISNRRSVYKLEKEE--Q--IPDGMCIDAEGK-LWVACYN------------------- 218 (297)
T ss_dssp EEG---GGTEEEEEEECTTTCCEEEEEEEEECCGGG--C--EEEEEEEBTTSC-EEEEEET-------------------
T ss_pred ecC---CCCcEEEEeccCCCCcccCcEEEEECCCCC--C--CCCeeEECCCCC-EEEEEcC-------------------
Confidence 652 23467777653 32111 11222111100 0 000167888885 4444321
Q ss_pred CCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeec-cCCCEEEEEEecC
Q 004475 392 NIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN-LNQLKILTSKESK 447 (751)
Q Consensus 392 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~ 447 (751)
...|++||.++|+.......... .+ ..++|+ ||+++|+++....
T Consensus 219 -~~~v~~~d~~tG~~~~~i~~p~~----~~-------t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 -GGRVIRLDPVTGKRLQTVKLPVD----KT-------TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -TTEEEEECTTTCCEEEEEECSSS----BE-------EEEEEESGGGCEEEEEEBCT
T ss_pred -CCEEEEEcCCCceEEEEEECCCC----Cc-------eEEEEeCCCCCEEEEEcCCc
Confidence 12689999988876555443311 12 225787 8999998887543
No 372
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.8e-09 Score=124.03 Aligned_cols=230 Identities=13% Similarity=0.109 Sum_probs=136.8
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecC--CcEEEEeecCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPSSR 109 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~~ 109 (751)
.+...+|||||++|+... ..+.|.++++.++..+.+.....+ ...+..++|+|+ |+.|+..+.+
T Consensus 11 ~V~~l~~s~dg~~latg~----------~dg~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~D-- 76 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCS----------SDKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYD-- 76 (753)
T ss_dssp CEEEECCCSSSCCEEEEE----------TTTEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETT--
T ss_pred eeEEEEECCCCCeEEEEE----------CCCcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCC--
Confidence 588899999999998863 235666667664433332211211 114778999998 8888887543
Q ss_pred CCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC---ceecCCC-ceEEeeeeCC
Q 004475 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPSP 184 (751)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~---~~~lt~~-~~~~~~~~Sp 184 (751)
+.|.++++ +++ ...+..+ ..+..++|+|
T Consensus 77 -----------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 77 -----------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp -----------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred -----------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 35677777 553 3334444 7788999999
Q ss_pred C--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec-----------
Q 004475 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA----------- 251 (751)
Q Consensus 185 D--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp----------- 251 (751)
+ |+.|+....+ ..+.+||+.++...... .+......+..+.|+|
T Consensus 110 ~~~~~~l~sgs~d-------------g~I~vwdl~~~~~~~~~----------~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 110 HEYGPLLLVASSD-------------GKVSVVEFKENGTTSPI----------IIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp GGGCSEEEEEETT-------------SEEEEEECCSSSCCCCE----------EEECCSSCEEEEEECCCC---------
T ss_pred CCCCCEEEEEeCC-------------CcEEEEEeecCCCccee----------EeecCCCceEEEEecCccccccccccc
Confidence 9 8888876543 36889998765321110 0111223466889999
Q ss_pred --CCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc----eEeEeeceeEE-EEEecC---CceEEEeeeeccc
Q 004475 252 --DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP----EILHKLDLRFS-VSWCDD---SLALVNETWYKTS 321 (751)
Q Consensus 252 --dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~l~~~~~~~~-~~~spd---g~~l~~~~~~~~~ 321 (751)
||+. ++... ..+.|.++++.. +... ..+......+. +.|+|+ |+.|+.+.. .
T Consensus 167 ~~d~~~-l~sgs------------~dg~I~iwd~~~--~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~--D- 228 (753)
T 3jro_A 167 TKESRK-FVTGG------------ADNLVKIWKYNS--DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ--D- 228 (753)
T ss_dssp CGGGCC-EEEEE------------TTSCEEEEEEET--TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES--S-
T ss_pred CCCCCE-EEEEE------------CCCeEEEEeccC--CcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec--C-
Confidence 5777 55543 235788887741 1111 12223455677 999999 787776552 2
Q ss_pred ceeEEEecCCCCCCcc-eeeeec--ccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 322 QTRTWLVCPGSKDVAP-RVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 322 ~~~l~~~~~~~~~~~~-~~l~~~--~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
..|.+.++.++.... ..+... ....+.. ++|+|||+.|+..+
T Consensus 229 -g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~------l~~spdg~~l~s~s 273 (753)
T 3jro_A 229 -RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (753)
T ss_dssp -SCEEEEEESSSSSCCBCCBSSSSCCSSCCCC------EEECTTTCCEEEEC
T ss_pred -CEEEEecCCCCCCcceeEEeccCCCCCceEE------EEEcCCCCEEEEEc
Confidence 234444544431111 111111 1111222 78999999988877
No 373
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=1.3e-08 Score=104.23 Aligned_cols=280 Identities=11% Similarity=-0.020 Sum_probs=148.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCC-C
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESP-D 82 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~-~ 82 (751)
..|+++|+.+ ++..... +.+... ..++||||++++...........++....|.++|+++++... +.-.. .
T Consensus 59 ~~V~ViD~~t----~~v~~~I--~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEA----GRVIGMI--DGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEEETTT----TEEEEEE--EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CEEEEEECCC----CeEEEEE--ECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 4688999887 7765433 333333 499999999987764310000000123679999999987433 31111 0
Q ss_pred cc-ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 83 IC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 83 ~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
+. ....-..+++||||++|++.... ....|.+
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~~-----------------------------------------------~~~~VsV 164 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQFS-----------------------------------------------PAPAVGV 164 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECS-----------------------------------------------SSCEEEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEcC-----------------------------------------------CCCeEEE
Confidence 00 00012467999999999887321 0146888
Q ss_pred EcC-CCC-ceecCCCc--eE------EeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC
Q 004475 162 GSL-DGT-AKDFGTPA--VY------TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (751)
Q Consensus 162 ~~~-~G~-~~~lt~~~--~~------~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 231 (751)
+|+ +++ ...+.-++ .+ ..++.++||+.+++...... .+ . +..+ . +. ...
T Consensus 165 ID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g------------~v-~-~~~~---~-~~---~~~ 223 (386)
T 3sjl_D 165 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG------------TP-E-ITHT---E-VF---HPE 223 (386)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS------------CC-E-EEEC---C-CC---SCT
T ss_pred EECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCC------------eE-E-Eeec---c-ee---ccc
Confidence 888 663 23332211 11 12367778876666532210 11 0 0000 0 00 000
Q ss_pred CCCCccCCccCCCceeeee-cCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-------------e
Q 004475 232 DIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------------L 297 (751)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~s-pdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------------~ 297 (751)
..+. .....|. +||+ ++|.+ ..+++|++++. +...+.+.. .
T Consensus 224 ~~~~--------~~~~~~~~~dG~--~~~vs------------~~g~V~v~d~~---~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 224 DEFL--------INHPAYSQKAGR--LVWPT------------YTGKIHQIDLS---SGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp TSCB--------CSCCEEETTTTE--EEEEB------------TTSEEEEEECT---TSSCEECCCEESSCHHHHHTTEE
T ss_pred cccc--------cccceeEcCCCc--EEEEe------------CCCEEEEEECC---CCcceeecceecccccccccccc
Confidence 0010 0123664 7875 45544 23579999885 333222211 1
Q ss_pred ceeEE-EEEecCCceEEEeeeec------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 298 DLRFS-VSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 298 ~~~~~-~~~spdg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.+... ++++|++++|+...... ....+||++|+.+.+. .+.+.-.. ..+. +++|+||+.++|..
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv-~~~i~vg~--~~~~------lavs~D~~~~ly~t 349 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER-LAKFEMGH--EIDS------INVSQDEKPLLYAL 349 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEEEE--EECE------EEECSSSSCEEEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-EEEEECCC--Ccce------EEECCCCCeEEEEE
Confidence 22233 67899999988765321 2346899999998621 22222111 1222 88999998555555
Q ss_pred eecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeec
Q 004475 371 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 412 (751)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 412 (751)
.. ....|.++|..+++...-+..
T Consensus 350 n~-------------------~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 350 ST-------------------GDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp ET-------------------TTTEEEEEETTTCCEEEEECC
T ss_pred cC-------------------CCCeEEEEECCCCcEEEEecC
Confidence 22 233788999999887554443
No 374
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.14 E-value=1.1e-08 Score=106.19 Aligned_cols=230 Identities=9% Similarity=0.003 Sum_probs=137.2
Q ss_pred ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
..+...+|||||+.||... +. .+.++++++++........ .+..+.|+++++.+++....
T Consensus 20 ~~V~~v~fs~dg~~la~g~---------~~--~~~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--- 79 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILST---------LK--SFEIYNVHPVAHIMSQEMR------HLSKVRMLHRTNYVAFVTGV--- 79 (355)
T ss_dssp CCCCEEEECTTSSEEEEEC---------SS--EEEEEEETTEEEEEEEECS------CCCEEEECTTSSEEEEECSS---
T ss_pred CceEEEEECCCCCEEEEEc---------CC--EEEEEecCCcceeeeeecC------CeEEEEEcCCCCEEEEEECC---
Confidence 3688999999999998742 22 2456666665443322111 24567899999988776321
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCCceEEeeeeCCCCce
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKY 188 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~ 188 (751)
...|.++|+ +|+ ...+.....+..+.|++++.
T Consensus 80 ---------------------------------------------d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~- 113 (355)
T 3vu4_A 80 ---------------------------------------------KEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFI- 113 (355)
T ss_dssp ---------------------------------------------TTEEEEEETTTTEEEEEEECSSCEEEEEECSSEE-
T ss_pred ---------------------------------------------ccEEEEEECCCCcEEEEEECCCceEEEEEcCCEE-
Confidence 036778888 663 33444346778899998753
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCc-e-eeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-L-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
++.. ...+++||+.+. + ...+.. ....+++++ +. +++.+..
T Consensus 114 -~~~~--------------~~~i~i~d~~~~~~~~~~~~~----------------~~~~~~~s~--~~-la~~sg~--- 156 (355)
T 3vu4_A 114 -VVSY--------------GDVISVFKFGNPWKRITDDIR----------------FGGVCEFSN--GL-LVYSNEF--- 156 (355)
T ss_dssp -EEEE--------------TTEEEEEESSTTCCBSSCCEE----------------EEEEEEEET--TE-EEEEESS---
T ss_pred -EEEE--------------cCEEEEEECCCCceeeEEecc----------------CCceEEEEc--cE-EEEeCCC---
Confidence 3322 235889999865 2 221111 011346666 33 5554211
Q ss_pred CCccccCcccceeeccCCCCCCCC-----------------ceEeEeeceeEE-EEEecCCceEEEeeeeccccee-EEE
Q 004475 267 DANVEVSPRDIIYTQPAEPAEGEK-----------------PEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTR-TWL 327 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~-----------------~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~-l~~ 327 (751)
..+.|.++++. .+. ...+......+. ++|+|||+.|+.++. ... |.+
T Consensus 157 -------~~g~v~iwd~~---~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~----d~~~v~i 222 (355)
T 3vu4_A 157 -------NLGQIHITKLQ---SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ----DGTIIRV 222 (355)
T ss_dssp -------CTTCEEEEECC---C------------------CCEEECCCSSCEEEEEECTTSSEEEEEET----TCSEEEE
T ss_pred -------cCcEEEEEECC---CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC----CCCEEEE
Confidence 23578888875 211 344555666777 999999998887662 234 666
Q ss_pred ecCCCCCCcceeeeec-ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 328 VCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 328 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
.++.++ .....+... ....+.. ++|||||++|+..+.+ ..|.+||+..+.
T Consensus 223 wd~~~~-~~~~~~~~g~h~~~v~~------~~~s~~~~~l~s~s~d---------------------~~v~iw~~~~~~ 273 (355)
T 3vu4_A 223 FKTEDG-VLVREFRRGLDRADVVD------MKWSTDGSKLAVVSDK---------------------WTLHVFEIFNDQ 273 (355)
T ss_dssp EETTTC-CEEEEEECTTCCSCEEE------EEECTTSCEEEEEETT---------------------CEEEEEESSCCS
T ss_pred EECCCC-cEEEEEEcCCCCCcEEE------EEECCCCCEEEEEECC---------------------CEEEEEEccCCC
Confidence 677664 222222211 2233333 8899999999888732 267888886543
No 375
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=5.4e-09 Score=105.93 Aligned_cols=245 Identities=9% Similarity=-0.007 Sum_probs=138.6
Q ss_pred CCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCC
Q 004475 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (751)
Q Consensus 19 g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg 98 (751)
.+.+.|.. .......|.|+|||+.|+|+. .....|++++. +|+.+.+..... ....++|+|||
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d---------~~~~~i~~~~~-~g~~~~~~~~~~-----~~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSD---------LVGRRVLGWRE-DGTVDVLLDATA-----FTNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEE---------TTTTEEEEEET-TSCEEEEEESCS-----CEEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEE---------CCCCEEEEEeC-CCCEEEEeCCCC-----ccceeeECCCC
Confidence 44555552 223456899999999999975 34467898987 555555543332 25678999999
Q ss_pred cEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCceecCCC----
Q 004475 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTP---- 174 (751)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~~lt~~---- 174 (751)
+.++.. .. ...|++++.+|+.+.+...
T Consensus 98 ~l~v~~-~~------------------------------------------------~~~v~~~~~~g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 98 RLVHCE-HG------------------------------------------------RRAITRSDADGQAHLLVGRYAGK 128 (305)
T ss_dssp CEEEEE-TT------------------------------------------------TTEEEEECTTSCEEEEECEETTE
T ss_pred CEEEEE-CC------------------------------------------------CCEEEEECCCCCEEEEEeccCCC
Confidence 855443 10 0367777777765555332
Q ss_pred --ceEEeeeeCCCCceEEEEEecCC--ccc---ccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCcee
Q 004475 175 --AVYTAVEPSPDQKYVLITSMHRP--YSY---KVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (751)
Q Consensus 175 --~~~~~~~~SpDG~~i~~~~~~~~--~~~---~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (751)
.....++++|||+ |+++...-. ..+ ..........||+++.++++.+.+. .. .....+
T Consensus 129 ~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~------------~~p~gl 193 (305)
T 3dr2_A 129 RLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL------------DHPNGL 193 (305)
T ss_dssp ECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE------------SSEEEE
T ss_pred ccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC------------CCCcce
Confidence 1234689999997 555421000 000 0000011357999999877666553 10 123478
Q ss_pred eeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc---eEeEe-eceeEE-EEEecCCceEEEeeeecccc
Q 004475 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHK-LDLRFS-VSWCDDSLALVNETWYKTSQ 322 (751)
Q Consensus 248 ~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~l~~-~~~~~~-~~~spdg~~l~~~~~~~~~~ 322 (751)
+|+|||+. |+++..... ......|++++++ +... +.+.. ..+... +.++++|+ |+.+. .
T Consensus 194 ~~spdg~~-lyv~~~~~~------~~~~~~i~~~~~~---~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-----~ 257 (305)
T 3dr2_A 194 AFSPDEQT-LYVSQTPEQ------GHGSVEITAFAWR---DGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS-----G 257 (305)
T ss_dssp EECTTSSE-EEEEECCC---------CCCEEEEEEEE---TTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC-----S
T ss_pred EEcCCCCE-EEEEecCCc------CCCCCEEEEEEec---CCCccCCeEEEECCCCCCCeEEECCCCC-EEEec-----C
Confidence 99999998 666542100 0012468888774 2111 11111 122223 78889998 54433 1
Q ss_pred eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
..|++++.++. ....+.... .... ++|++|++.|++.+
T Consensus 258 ~gv~~~~~~g~--~~~~~~~~~--~~~~------~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 258 TGVCVFDSDGQ--LLGHIPTPG--TASN------CTFDQAQQRLFITG 295 (305)
T ss_dssp SEEEEECTTSC--EEEEEECSS--CCCE------EEECTTSCEEEEEE
T ss_pred CcEEEECCCCC--EEEEEECCC--ceeE------EEEeCCCCEEEEEc
Confidence 24889998663 222222111 1111 77999999888877
No 376
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=4.8e-09 Score=109.50 Aligned_cols=276 Identities=11% Similarity=-0.031 Sum_probs=147.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCC-CC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFES-PD 82 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~-~~ 82 (751)
..|.++|+.+ ++...-. +-+..- ...+||||++|+...........+.....|.++|+.+++... +.-. ..
T Consensus 99 ~~VsVID~~t----~~vv~~I--~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGST----GRILGMT--DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTT----TEEEEEE--EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCC----CEEEEEE--ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 4788999888 7666433 333334 899999999997764210000001234689999999887533 3211 10
Q ss_pred cc-ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 83 IC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 83 ~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. .......+++||||++|+..... ....|.+
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~-----------------------------------------------~~~~VsV 204 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFS-----------------------------------------------PAPAVGV 204 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECS-----------------------------------------------SSCEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEecC-----------------------------------------------CCCeEEE
Confidence 00 00012467999999999987321 0147888
Q ss_pred EcC-CCCc-eecCCCce--------EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC-
Q 004475 162 GSL-DGTA-KDFGTPAV--------YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA- 230 (751)
Q Consensus 162 ~~~-~G~~-~~lt~~~~--------~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~- 230 (751)
+|+ +++. .++.-++. ...+.+++||+.+++.. .+++..........
T Consensus 205 ID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-----------------------~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 205 VDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-----------------------ADGETKVTNTEVFHT 261 (426)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC-----------------------CTTCCEEEECCCCSC
T ss_pred EECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-----------------------CCCcEEEEeeeeecc
Confidence 888 6533 33332211 11244556666555543 21111100000000
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-------------ee
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-------------KL 297 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-------------~~ 297 (751)
...| -...+.+++||++ +++.. ..+.++++|.. +.....+. ..
T Consensus 262 ~~~p--------~~~~~~~~~dg~~-~~~~s------------~~g~V~ViD~~---~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 262 EDEL--------LINHPAFSLRSGR-LVWPT------------YTGKIFQADLT---AEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TTSC--------BCSCCEECTTTCE-EEEEB------------TTSEEEEEEEC---SSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCc--------eeeEeeecCCCCE-EEEEe------------CCCcEEEEecc---CCceEEeeeeeeccccccccccc
Confidence 0000 0013578999998 66654 12468888874 22211111 01
Q ss_pred ceeEE-EEEecCCceEEEeeeec------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475 298 DLRFS-VSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 298 ~~~~~-~~~spdg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
..... ..++|||++++...... ....+|+++|+.+. .....+.-... -+. +.|+|||+.++|..
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-kvv~~I~vg~~--P~g------ia~spDg~~~lyv~ 388 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-ERINKIELGHE--IDS------INVSQDAEPLLYAL 388 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-CEEEEEEEEEE--ECE------EEECCSSSCEEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC-eEEEEEECCCC--cCe------EEEccCCCEEEEEE
Confidence 12222 57899999887654221 12468999999885 22222221111 111 88999999555555
Q ss_pred eecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 371 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
+. ....|.++|+.+++...-
T Consensus 389 n~-------------------~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 389 SA-------------------GTQTLHIYDAATGEELRS 408 (426)
T ss_dssp ET-------------------TTTEEEEEETTTCCEEEE
T ss_pred cC-------------------CCCeEEEEECCCCCEEEE
Confidence 31 234799999999887544
No 377
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.13 E-value=5.9e-09 Score=111.70 Aligned_cols=197 Identities=11% Similarity=0.026 Sum_probs=114.5
Q ss_pred ccccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCC---CCee--eccCCCCccccceeeeeEEecCCcEEEEe
Q 004475 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (751)
Q Consensus 31 ~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~---g~~~--~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 104 (751)
..+...+||| ||++||..+ ..+.|.++++.+ +... .++... ...+..++|+||++.|+..
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s----------~dg~v~vwd~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGS----------DQGVIKIWNLKEIIVGEVYSSSLTYDC----SSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEE----------TTSEEEEEEHHHHHTTCCCSCSEEEEC----SSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCCEEEEec----------CCceEEEeECcccccCcccceeeeccC----CCCEEEEEEeCCCCEEEEE
Confidence 3688999999 999998864 335777778766 4311 111111 1247889999999999887
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC----CCCceecC--------
Q 004475 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL----DGTAKDFG-------- 172 (751)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~G~~~~lt-------- 172 (751)
+.+ ..|.++++ +|+..+..
T Consensus 130 s~d-------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~ 160 (437)
T 3gre_A 130 SKD-------------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKI 160 (437)
T ss_dssp ETT-------------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred eCC-------------------------------------------------CEEEEEEeccccCCceeeccccceeEEE
Confidence 543 23333333 23221111
Q ss_pred ------CCceEEee--eeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCC
Q 004475 173 ------TPAVYTAV--EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGM 244 (751)
Q Consensus 173 ------~~~~~~~~--~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (751)
....+..+ .++||++.|+....+ ..|.+||+.+++.......+ .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~----------~h~~~v 217 (437)
T 3gre_A 161 NLKNFGKNEYAVRMRAFVNEEKSLLVALTNL-------------SRVIIFDIRTLERLQIIENS----------PRHGAV 217 (437)
T ss_dssp EGGGGSSCCCEEEEEEEECSSCEEEEEEETT-------------SEEEEEETTTCCEEEEEECC----------GGGCCE
T ss_pred EccCcccccCceEEEEEEcCCCCEEEEEeCC-------------CeEEEEeCCCCeeeEEEccC----------CCCCce
Confidence 11222222 377888888776543 46899999876543221111 012346
Q ss_pred ceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc-eEeE-eeceeEE-E----EEecCCceEEEeee
Q 004475 245 RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH-KLDLRFS-V----SWCDDSLALVNETW 317 (751)
Q Consensus 245 ~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~-~~~~~~~-~----~~spdg~~l~~~~~ 317 (751)
..++|+|||+. ++..+ ..+.|.++++. .+.. ..+. .....+. + .|+||++.|+.+.
T Consensus 218 ~~~~~s~~~~~-l~s~~------------~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~- 280 (437)
T 3gre_A 218 SSICIDEECCV-LILGT------------TRGIIDIWDIR---FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS- 280 (437)
T ss_dssp EEEEECTTSCE-EEEEE------------TTSCEEEEETT---TTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES-
T ss_pred EEEEECCCCCE-EEEEc------------CCCeEEEEEcC---CccEEEEEecCCCCceEEEEeccccCCCccEEEEEc-
Confidence 68999999997 55543 23578888885 2222 2222 2233455 6 4456777777654
Q ss_pred ecccceeEEEecCCCC
Q 004475 318 YKTSQTRTWLVCPGSK 333 (751)
Q Consensus 318 ~~~~~~~l~~~~~~~~ 333 (751)
....|.+.++.++
T Consensus 281 ---~dg~i~iwd~~~~ 293 (437)
T 3gre_A 281 ---SKTFLTIWNFVKG 293 (437)
T ss_dssp ---TTEEEEEEETTTT
T ss_pred ---CCCcEEEEEcCCC
Confidence 2346777777764
No 378
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.12 E-value=2.2e-08 Score=101.36 Aligned_cols=261 Identities=9% Similarity=0.008 Sum_probs=145.7
Q ss_pred CCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchh
Q 004475 70 ETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (751)
Q Consensus 70 ~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (751)
.+.+.++|+.+.. ....++|+|||+.|++....
T Consensus 33 ~~~~~~~l~~~~~-----~~egp~~~~~g~~l~~~d~~------------------------------------------ 65 (305)
T 3dr2_A 33 GDARLLTLYDQAT-----WSEGPAWWEAQRTLVWSDLV------------------------------------------ 65 (305)
T ss_dssp TTCCCEEEECCCS-----SEEEEEEEGGGTEEEEEETT------------------------------------------
T ss_pred CCCceEEEecCCc-----CccCCeEeCCCCEEEEEECC------------------------------------------
Confidence 3556777765544 24688999999988887321
Q ss_pred hhhhheeeEEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCC
Q 004475 150 LFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (751)
Q Consensus 150 ~~~~~~~~~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 228 (751)
...|++++.+|+.+.+... .....++++|||+.+ +.... ...|++++.+ ++.+.+....
T Consensus 66 ------~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~-v~~~~------------~~~v~~~~~~-g~~~~~~~~~ 125 (305)
T 3dr2_A 66 ------GRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLV-HCEHG------------RRAITRSDAD-GQAHLLVGRY 125 (305)
T ss_dssp ------TTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEE-EEETT------------TTEEEEECTT-SCEEEEECEE
T ss_pred ------CCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEE-EEECC------------CCEEEEECCC-CCEEEEEecc
Confidence 1468888887766655544 566789999999844 43222 2358888887 4444443211
Q ss_pred CCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC------CCccccCcccceeeccCCCCCCCCceEeEeeceeEE
Q 004475 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG------DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS 302 (751)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 302 (751)
.. . ....+..+.++|||+ |+++...-+. ...........||+++.+ ++..+.+. ......
T Consensus 126 ~~--~------~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~~~-~~~~p~ 191 (305)
T 3dr2_A 126 AG--K------RLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQRMA-DLDHPN 191 (305)
T ss_dssp TT--E------ECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEEEE-EESSEE
T ss_pred CC--C------ccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEEEe-cCCCCc
Confidence 00 0 011245789999997 5664211000 000001123579999874 44555554 333334
Q ss_pred -EEEecCCceEEEeeeec--ccceeEEEecCCCCCCc-ceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcce
Q 004475 303 -VSWCDDSLALVNETWYK--TSQTRTWLVCPGSKDVA-PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 378 (751)
Q Consensus 303 -~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 378 (751)
++|+|||+.|++..... .....|++++.+++... .+.+...... ..-.+++++||+ |++..
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~------~pdgi~~d~~G~-lwv~~-------- 256 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG------LPDGFCVDRGGW-LWSSS-------- 256 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS------CCCSEEECTTSC-EEECC--------
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC------CCCeEEECCCCC-EEEec--------
Confidence 89999999887765321 01257888887653100 0111111000 011166788887 43333
Q ss_pred EEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475 379 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 458 (751)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~ 458 (751)
...|++|+.+ |+......... ....++|++|++.|+++.. ..||.+++
T Consensus 257 --------------~~gv~~~~~~-g~~~~~~~~~~------------~~~~~~f~~d~~~L~it~~-----~~l~~~~~ 304 (305)
T 3dr2_A 257 --------------GTGVCVFDSD-GQLLGHIPTPG------------TASNCTFDQAQQRLFITGG-----PCLWMLPL 304 (305)
T ss_dssp --------------SSEEEEECTT-SCEEEEEECSS------------CCCEEEECTTSCEEEEEET-----TEEEEEEC
T ss_pred --------------CCcEEEECCC-CCEEEEEECCC------------ceeEEEEeCCCCEEEEEcC-----CeEEEEEC
Confidence 1148888885 44333222211 1233678889998887752 36887764
No 379
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.12 E-value=1.1e-08 Score=103.06 Aligned_cols=232 Identities=11% Similarity=0.085 Sum_probs=136.6
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 113 (751)
..|.|+|+++.|+|+. .....|+++++++++.+.+... . .+..++|+|||+ |++...
T Consensus 16 Egp~w~~~~~~l~~~d---------~~~~~i~~~d~~~~~~~~~~~~-~-----~~~~i~~~~dG~-l~v~~~------- 72 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVD---------IPAKKVCRWDSFTKQVQRVTMD-A-----PVSSVALRQSGG-YVATIG------- 72 (297)
T ss_dssp EEEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEECS-S-----CEEEEEEBTTSS-EEEEET-------
T ss_pred cCCeEECCCCEEEEEE---------CCCCEEEEEECCCCcEEEEeCC-C-----ceEEEEECCCCC-EEEEEC-------
Confidence 4799999999999974 3457899999998876554322 2 357889999999 444321
Q ss_pred CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCC-----C-ceEEeeeeCCCC
Q 004475 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT-----P-AVYTAVEPSPDQ 186 (751)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~-----~-~~~~~~~~SpDG 186 (751)
..|++++. +|+.+.+.. . .....++++|||
T Consensus 73 -------------------------------------------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG 109 (297)
T 3g4e_A 73 -------------------------------------------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG 109 (297)
T ss_dssp -------------------------------------------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS
T ss_pred -------------------------------------------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC
Confidence 36788888 565544422 1 345689999999
Q ss_pred ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
+ |++........... .......||+++.++.. ..+... ......++|+|||+. ++++..
T Consensus 110 ~-l~~~~~~~~~~~~~-~~~~~~~l~~~d~~g~~-~~~~~~-------------~~~pngi~~spdg~~-lyv~~~---- 168 (297)
T 3g4e_A 110 R-YFAGTMAEETAPAV-LERHQGALYSLFPDHHV-KKYFDQ-------------VDISNGLDWSLDHKI-FYYIDS---- 168 (297)
T ss_dssp C-EEEEEEECCSBTTB-CCTTCEEEEEECTTSCE-EEEEEE-------------ESBEEEEEECTTSCE-EEEEEG----
T ss_pred C-EEEecCCccccccc-ccCCCcEEEEEECCCCE-EEEeec-------------cccccceEEcCCCCE-EEEecC----
Confidence 8 55654332110000 00113578888887543 222111 012347899999998 666542
Q ss_pred CCccccCcccceeeccCCCCCCCC--ceEeEee---ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceee
Q 004475 267 DANVEVSPRDIIYTQPAEPAEGEK--PEILHKL---DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 340 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~--~~~l~~~---~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l 340 (751)
..+.|+++++++.++.. .+.+... .+... +.++++|+ |+.+.. ....|++++++++ +....
T Consensus 169 -------~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~---~~~~v~~~d~~tG--~~~~~ 235 (297)
T 3g4e_A 169 -------LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACY---NGGRVIRLDPVTG--KRLQT 235 (297)
T ss_dssp -------GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEE---TTTEEEEECTTTC--CEEEE
T ss_pred -------CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEc---CCCEEEEEcCCCc--eEEEE
Confidence 23578888763222221 1222221 23344 88999996 544442 2246999999864 22222
Q ss_pred eecccccccCCCCCCCeeeC-CCCCEEEEeee
Q 004475 341 FDRVFENVYSDPGSPMMTRT-STGTNVIAKIK 371 (751)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~s-pDG~~l~~~~~ 371 (751)
.......... ++|+ ||++.|++.+.
T Consensus 236 i~~p~~~~t~------~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 236 VKLPVDKTTS------CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EECSSSBEEE------EEEESGGGCEEEEEEB
T ss_pred EECCCCCceE------EEEeCCCCCEEEEEcC
Confidence 2222111111 7788 89999888773
No 380
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.10 E-value=1.2e-08 Score=106.02 Aligned_cols=251 Identities=9% Similarity=0.051 Sum_probs=142.2
Q ss_pred cceeEEeecCCCCCCCCcccccCC-CCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~-~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~ 82 (751)
...|.+|++.+ +.......+ .....+...+|||||++|+... ..+.|.++++.+++...+.....
T Consensus 63 dg~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~ 128 (368)
T 3mmy_A 63 ANDVRCWEVQD----SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS----------CDKTAKMWDLSSNQAIQIAQHDA 128 (368)
T ss_dssp TSEEEEEEECT----TSCEEEEEEEECSSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTTEEEEEEECSS
T ss_pred CCcEEEEEcCC----CCceeEEEeccccCCEEEEEECcCCCEEEEEc----------CCCcEEEEEcCCCCceeeccccC
Confidence 34689999976 333221111 1233688999999999999753 34688889999888776644333
Q ss_pred ccccceeeeeEE--ecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475 83 ICLNAVFGSFVW--VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (751)
Q Consensus 83 ~~~~~~~~~~~w--spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (751)
.+..++| +|+|+.|+..+.+ ..|.
T Consensus 129 -----~v~~~~~~~~~~~~~l~~~~~d-------------------------------------------------g~i~ 154 (368)
T 3mmy_A 129 -----PVKTIHWIKAPNYSCVMTGSWD-------------------------------------------------KTLK 154 (368)
T ss_dssp -----CEEEEEEEECSSCEEEEEEETT-------------------------------------------------SEEE
T ss_pred -----ceEEEEEEeCCCCCEEEEccCC-------------------------------------------------CcEE
Confidence 4778899 8999988877442 4788
Q ss_pred EEcC-CCC-ceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475 161 LGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (751)
Q Consensus 161 ~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (751)
++|+ +++ ...+..+.....+.++++ .+++...+ ..+.+|+..............
T Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~i~~~~~~~~~~~~~~~~~~--------- 210 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPERCYCADVIYP--MAVVATAE-------------RGLIVYQLENQPSEFRRIESP--------- 210 (368)
T ss_dssp EECSSCSSCSEEEECSSCEEEEEEETT--EEEEEEGG-------------GCEEEEECSSSCEEEEECCCS---------
T ss_pred EEECCCCcEEEEEecCCCceEEEecCC--eeEEEeCC-------------CcEEEEEeccccchhhhcccc---------
Confidence 8898 663 334443344445555543 44444332 357788887543221110000
Q ss_pred CccCCCceeeeecCCCc--e-EEEEEeccCCCCccccCcccceeeccCCCCCC-CCceEeEeece------------eEE
Q 004475 239 SVREGMRSISWRADKPS--T-LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEILHKLDL------------RFS 302 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~--~-i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~------------~~~ 302 (751)
.......+.+.+++.. . ++... ..+.+.++++..... .....+..... .+.
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~------------~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 277 (368)
T 3mmy_A 211 -LKHQHRCVAIFKDKQNKPTGFALGS------------IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVN 277 (368)
T ss_dssp -CSSCEEEEEEEECTTSCEEEEEEEE------------TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEE
T ss_pred -ccCCCceEEEcccCCCCCCeEEEec------------CCCcEEEEecCCCCccccceeeeeeecccccccccccccceE
Confidence 0111234455544432 0 22221 235677777642110 11122222222 466
Q ss_pred -EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 303 -VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 303 -~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
+.|+|||+.|+.+.. ...|.+.++.++ ............+.. ++|+|||++|+..+.
T Consensus 278 ~~~~sp~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~~~~~~v~~------~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGS----DGRFSFWDKDAR--TKLKTSEQLDQPISA------CCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEECTTTCCEEEEET----TSCEEEEETTTT--EEEEECCCCSSCEEE------EEECTTSSCEEEEEC
T ss_pred EEEEecCCCEEEEEcc----CCeEEEEECCCC--cEEEEecCCCCCceE------EEECCCCCeEEEEec
Confidence 999999999887652 245777777764 222222222222222 889999999999883
No 381
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.10 E-value=4.1e-10 Score=109.99 Aligned_cols=193 Identities=15% Similarity=0.093 Sum_probs=103.5
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.||++||.|.. ...| ..+... +..+|.|++ .+.+|+|.+.... .+|+.+.++.
T Consensus 13 ~~~lv~lhg~g~~-----------~~~~----~~~~~~-L~~~~~vi~---~Dl~GhG~S~~~~------~~~~~~~~~~ 67 (242)
T 2k2q_B 13 KTQLICFPFAGGY-----------SASF----RPLHAF-LQGECEMLA---AEPPGHGTNQTSA------IEDLEELTDL 67 (242)
T ss_dssp CCEEESSCCCCHH-----------HHHH----HHHHHH-HCCSCCCEE---EECCSSCCSCCCT------TTHHHHHHHH
T ss_pred CceEEEECCCCCC-----------HHHH----HHHHHh-CCCCeEEEE---EeCCCCCCCCCCC------cCCHHHHHHH
Confidence 5789999996411 0111 112223 356799999 6677888764321 2344455555
Q ss_pred HHHcCCCC-CCcEEEEEeChHHHHHHHHHHh------CCCceeEEEEccCCCCCCC-CccC-------c---ccccccch
Q 004475 592 VVRRGVAD-PSRIAVGGHSYGAFMTAHLLAH------APHLFCCGIARSGSYNKTL-TPFG-------F---QTEFRTLW 653 (751)
Q Consensus 592 l~~~~~id-~~~i~l~G~S~GG~~a~~~a~~------~p~~~~~~v~~~~~~d~~~-~~~~-------~---~~~~~~~~ 653 (751)
+.+.-.+. ..++.++||||||.+|+.+|.+ +|+.+.......+...... .... + ........
T Consensus 68 ~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (242)
T 2k2q_B 68 YKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELV 147 (242)
T ss_dssp TTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTT
T ss_pred HHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHh
Confidence 44332222 2589999999999999999986 5665321111111111000 0000 0 00000000
Q ss_pred hh-----------HHHHH---hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475 654 EA-----------TNVYI---EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 719 (751)
Q Consensus 654 ~~-----------~~~~~---~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 719 (751)
.. ...+. .... ..+.++++|+|+++|++|..++ .... .+.+.-...+++++++ +|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~---~~~~----~~~~~~~~~~~~~~~~-gH~~ 218 (242)
T 2k2q_B 148 ENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI---RDAE----GWKKWAKDITFHQFDG-GHMF 218 (242)
T ss_dssp HHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH---HHHH----HHHTTCCCSEEEEEEC-CCSH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH---HHHH----HHHHHhcCCeEEEEeC-Ccee
Confidence 00 00111 1111 1256789999999999998753 2222 2333222345788875 8976
Q ss_pred CccccHHHHHHHHHHHHHHH
Q 004475 720 AARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 720 ~~~~~~~~~~~~~~~fl~~~ 739 (751)
. .+..+.+.+.+.+||.+.
T Consensus 219 ~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 219 L-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp H-HHHCHHHHHHHHHHHHTT
T ss_pred E-cCCHHHHHHHHHHHhhcc
Confidence 5 455678888999999754
No 382
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.10 E-value=4e-08 Score=104.89 Aligned_cols=212 Identities=10% Similarity=0.087 Sum_probs=116.3
Q ss_pred ceEEeeeeCCCCc-eEEEEEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCCCCCCCCccCCccCCCceeeeec
Q 004475 175 AVYTAVEPSPDQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (751)
Q Consensus 175 ~~~~~~~~SpDG~-~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp 251 (751)
..+..++|+|+++ .|+.... ...|.+|++.++.. ..+... ..+......+..++|+|
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~-------------dg~i~vwd~~~~~~~~~~~~~~-------~~~~~h~~~v~~v~~~p 241 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASD-------------DHTICLWDINATPKEHRVIDAK-------NIFTGHTAVVEDVAWHL 241 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECT-------------TSCEEEEETTSCCBGGGEEECS-------EEECCCSSCEEEEEECS
T ss_pred CCeEEEEeCCCCCCeEEEEeC-------------CCeEEEEeCCCCCCCCceeccc-------eeecCCCCCEeeeEEeC
Confidence 5677899999999 5544322 34688999976321 111000 01112223466899999
Q ss_pred CCCceEEEEEeccCCCCccccCcccceeeccCCCCC-CCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEec
Q 004475 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVC 329 (751)
Q Consensus 252 dG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~ 329 (751)
++..+++... ..+.|+++++.... ......+......+. +.|+|+++.++++... ...|.+++
T Consensus 242 ~~~~~l~s~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~---dg~v~vwd 306 (430)
T 2xyi_A 242 LHESLFGSVA------------DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA---DKTVALWD 306 (430)
T ss_dssp SCTTEEEEEE------------TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET---TSEEEEEE
T ss_pred CCCCEEEEEe------------CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC---CCeEEEEe
Confidence 7766344433 33678888885211 123344445556677 9999999975544422 24566677
Q ss_pred CCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce---
Q 004475 330 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK--- 406 (751)
Q Consensus 330 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--- 406 (751)
+... ..+..........+.. ++|+|+|+.+++... ....|.+||+.....
T Consensus 307 ~~~~-~~~~~~~~~h~~~v~~------i~~sp~~~~~l~s~~--------------------~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 307 LRNL-KLKLHSFESHKDEIFQ------VQWSPHNETILASSG--------------------TDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp TTCT-TSCSEEEECCSSCEEE------EEECSSCTTEEEEEE--------------------TTSCCEEEEGGGTTCCCC
T ss_pred CCCC-CCCeEEeecCCCCEEE------EEECCCCCCEEEEEe--------------------CCCcEEEEeCCCCccccC
Confidence 6653 1222222222222222 889999986555441 123688888875221
Q ss_pred ---------eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 407 ---------ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 407 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
..+...... ......++|+|++++++++.... ..|.++++..
T Consensus 360 ~~~~~~~~~~~~~~~~~h---------~~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~~~ 410 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGH---------TAKISDFSWNPNEPWIICSVSED---NIMQVWQMAE 410 (430)
T ss_dssp HHHHHHCCTTEEEECCCC---------SSCEEEEEECSSSTTEEEEEETT---SEEEEEEECH
T ss_pred ccccccCCcceEEEcCCC---------CCCceEEEECCCCCCEEEEEECC---CCEEEeEccc
Confidence 111111110 01122368999999666665432 4566666654
No 383
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=3.9e-08 Score=97.39 Aligned_cols=239 Identities=16% Similarity=0.125 Sum_probs=144.0
Q ss_pred CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc-ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCC
Q 004475 42 GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (751)
Q Consensus 42 G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 120 (751)
|++|+|.. ...|++++++++..+.+....... -......++|+|+++.|+++...
T Consensus 1 ~~~l~~~~-----------~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------------- 56 (267)
T 1npe_A 1 GTHLLFAQ-----------TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------- 56 (267)
T ss_dssp CEEEEEEE-----------EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-------------
T ss_pred CcEEEEEc-----------CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC-------------
Confidence 56788853 258999999877654321100000 00124578999999899987321
Q ss_pred CCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecC-CC-ceEEeeeeCCCCceEEEEEecCC
Q 004475 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRP 197 (751)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~ 197 (751)
...|++++++| ..+.+. .. .....++++|+++.|+++...
T Consensus 57 -----------------------------------~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~-- 99 (267)
T 1npe_A 57 -----------------------------------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ-- 99 (267)
T ss_dssp -----------------------------------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--
T ss_pred -----------------------------------CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--
Confidence 14788888866 334333 22 466789999999999887533
Q ss_pred cccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccc
Q 004475 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (751)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~ 277 (751)
...|++++.++...+.+.... ....+.++++|++.+ |+++... ...+.
T Consensus 100 ----------~~~I~~~~~~g~~~~~~~~~~------------~~~P~~i~vd~~~g~-lyv~~~~---------~~~~~ 147 (267)
T 1npe_A 100 ----------LDRIEVAKMDGTQRRVLFDTG------------LVNPRGIVTDPVRGN-LYWTDWN---------RDNPK 147 (267)
T ss_dssp ----------TTEEEEEETTSCSCEEEECSS------------CSSEEEEEEETTTTE-EEEEECC---------SSSCE
T ss_pred ----------CCEEEEEEcCCCCEEEEEECC------------CCCccEEEEeeCCCE-EEEEECC---------CCCcE
Confidence 346888998876544332111 123458899998887 7776511 01257
Q ss_pred eeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCC
Q 004475 278 IYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 355 (751)
Q Consensus 278 l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 355 (751)
|++++.+ +...+.+.... .... ++++|+++.|+++.. ....|+++++++. ..+.+.... ..|
T Consensus 148 I~~~~~d---g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~---~~~~I~~~~~~g~--~~~~~~~~~--------~~P 211 (267)
T 1npe_A 148 IETSHMD---GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA---GTHRAECLNPAQP--GRRKVLEGL--------QYP 211 (267)
T ss_dssp EEEEETT---SCCCEEEECTTCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTEE--EEEEEEECC--------CSE
T ss_pred EEEEecC---CCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC---CCCEEEEEecCCC--ceEEEecCC--------CCc
Confidence 8888875 44444443222 2234 899999998887662 3458999999873 222332211 111
Q ss_pred CeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475 356 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 410 (751)
Q Consensus 356 ~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 410 (751)
...++|+..|++... ....|+++|.++|+....+
T Consensus 212 -~gi~~d~~~lyva~~--------------------~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 212 -FAVTSYGKNLYYTDW--------------------KTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp -EEEEEETTEEEEEET--------------------TTTEEEEEETTTTEEEEEE
T ss_pred -eEEEEeCCEEEEEEC--------------------CCCeEEEEeCCCCCceEEE
Confidence 223456667766552 2347899999888765443
No 384
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.07 E-value=1.7e-08 Score=102.87 Aligned_cols=250 Identities=10% Similarity=0.052 Sum_probs=135.5
Q ss_pred eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC
Q 004475 88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG 166 (751)
Q Consensus 88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G 166 (751)
.+..++|+|||++|+..+.+ ..|.++|+ ++
T Consensus 15 ~V~~v~~s~~g~~lasgs~D-------------------------------------------------~~v~lwd~~~~ 45 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSD-------------------------------------------------RSVKIFDVRNG 45 (316)
T ss_dssp CEEEEEECGGGCEEEEEETT-------------------------------------------------TEEEEEEEETT
T ss_pred eEEEeeEcCCCCEEEEEeCC-------------------------------------------------CeEEEEEecCC
Confidence 36788999999999887543 35666777 55
Q ss_pred C---ceecCCC-ceEEeeeeCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCc
Q 004475 167 T---AKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 167 ~---~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
+ ...+..+ ..+..++|+|+ |+.|+..+.+ ..+.+||+.++..+.+... ...
T Consensus 46 ~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-------------~~v~iWd~~~~~~~~~~~~----------~~h 102 (316)
T 3bg1_A 46 GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-------------RKVIIWREENGTWEKSHEH----------AGH 102 (316)
T ss_dssp EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-------------SCEEEECCSSSCCCEEEEE----------CCC
T ss_pred CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-------------CEEEEEECCCCcceEEEEc----------cCC
Confidence 3 2344445 77889999874 8887766543 3588999986532222111 112
Q ss_pred cCCCceeeeecC--CCceEEEEEeccCCCCccccCcccceeeccCCCCCCC-Cc---eEeEeeceeEE-EEEecCC----
Q 004475 241 REGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KP---EILHKLDLRFS-VSWCDDS---- 309 (751)
Q Consensus 241 ~~~~~~~~~spd--G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~l~~~~~~~~-~~~spdg---- 309 (751)
...+..++|+|+ |.. |+..+ ..+.|.++++. .. .. ..+......+. +.|+|++
T Consensus 103 ~~~V~~v~~~p~~~g~~-lasgs------------~D~~i~lwd~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLI-LACGS------------SDGAISLLTYT---GEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp SSCCCEEEECCTTTCSC-EEEEC------------SSSCEEEEEEC---SSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCceEEEEECCCCCCcE-EEEEc------------CCCCEEEEecC---CCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 234668999998 555 44432 23467777764 21 11 11112233445 7899883
Q ss_pred -------------ceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCC----CEEEEeeee
Q 004475 310 -------------LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG----TNVIAKIKK 372 (751)
Q Consensus 310 -------------~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG----~~l~~~~~~ 372 (751)
+.|+..+ .+..-.||.+..... .............+.. ++|+|++ +.|+..+.+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~-~~~~~~l~~h~~~V~~------v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQ-WKEEQKLEAHSDWVRD------VAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp ----CCSCCCCCCCBEECCB--TTSBCCEEEECTTSC-EEEEECCBCCSSCEEE------EECCCCSSCSCCEEEEEETT
T ss_pred ccccccccCccccceEEEec--CCCeEEEEEeCCCCc-cceeeecccCCCceEE------EEecCCCCCCCceEEEEcCC
Confidence 5555443 223345665532210 0111111222222222 7899997 677776632
Q ss_pred cCCcceEEEEccCCCCCCCCCceeEEEecCCCce----eEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCC
Q 004475 373 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK----ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT 448 (751)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 448 (751)
..|.+|++.+... ..+... .......++|||||+.|+.....
T Consensus 238 ---------------------~~v~iw~~~~~~~~~~~~~~~~~-----------~~~~v~~v~~sp~g~~las~~~D-- 283 (316)
T 3bg1_A 238 ---------------------GRVFIWTCDDASSNTWSPKLLHK-----------FNDVVWHVSWSITANILAVSGGD-- 283 (316)
T ss_dssp ---------------------CEEEEEECSSTTCCCCBCCEEEE-----------CSSCEEEEEECTTTCCEEEEESS--
T ss_pred ---------------------CeEEEEEccCccccchhhhhhhc-----------CCCcEEEEEEcCCCCEEEEEcCC--
Confidence 2688888865311 111111 01111236899999987765422
Q ss_pred CCCeEEEEEcC-CCceeEeecCC
Q 004475 449 EITQYHILSWP-LKKSSQITNFP 470 (751)
Q Consensus 449 ~~~~l~~~~~~-~g~~~~lt~~~ 470 (751)
..+.+++.. .|+...+....
T Consensus 284 --~~v~lw~~~~~g~~~~~~~~~ 304 (316)
T 3bg1_A 284 --NKVTLWKESVDGQWVCISDVN 304 (316)
T ss_dssp --SCEEEEEECTTSCEEEEEECC
T ss_pred --CeEEEEEECCCCcEEEeeecc
Confidence 235555543 35555554443
No 385
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.2e-08 Score=119.03 Aligned_cols=203 Identities=12% Similarity=0.062 Sum_probs=125.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.+...+|||||+.||... ..+.|++++..+++......... .+..++|+| |++|+..+.+
T Consensus 19 ~V~~lafspdg~~lAsgs----------~Dg~I~lw~~~~~~~~~~~~~~~-----~V~~l~fsp-g~~L~S~s~D---- 78 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT----------VTGEVHIYGQQQVEVVIKLEDRS-----AIKEMRFVK-GIYLVVINAK---- 78 (902)
T ss_dssp CEEEEEEETTTTEEEEEE----------TTSEEEEECSTTCEEEEECSSCC-----CEEEEEEET-TTEEEEEETT----
T ss_pred CcEEEEECCCCCEEEEEe----------CCCEEEEEeCCCcEEEEEcCCCC-----CEEEEEEcC-CCEEEEEECc----
Confidence 578899999999999853 33678888887765443322221 478999999 8877766432
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCCceEEeeeeCCCCceE
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYV 189 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~i 189 (751)
..|.++|+ +|+ ...+.....+..++|+|||++|
T Consensus 79 ---------------------------------------------~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 79 ---------------------------------------------DTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp ---------------------------------------------CEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEE
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 46788888 563 3444434678899999999999
Q ss_pred EEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (751)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~ 269 (751)
+....+ ..+.+||++++............. ...+......+..++|+|++...++...
T Consensus 114 ~sgs~d-------------g~V~lwd~~~~~~~~~~i~~~~~~-~~~~~~h~~~V~sl~~sp~~~~~l~~g~-------- 171 (902)
T 2oaj_A 114 LIGLQN-------------GSMIVYDIDRDQLSSFKLDNLQKS-SFFPAARLSPIVSIQWNPRDIGTVLISY-------- 171 (902)
T ss_dssp EEEETT-------------SCEEEEETTTTEEEEEEECCHHHH-HTCSSSCCCCCCEEEEETTEEEEEEEEC--------
T ss_pred EEEcCC-------------CcEEEEECCCCccccceecccccc-ccccccCCCCeEEEEEccCCCCEEEEEe--------
Confidence 876543 368899998876432110000000 0001122234678999998655244432
Q ss_pred cccCcccceeeccCCCCCCCCce-EeEee------------------ceeEE-EEEecCCceEEEeeeecccceeEEEec
Q 004475 270 VEVSPRDIIYTQPAEPAEGEKPE-ILHKL------------------DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVC 329 (751)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~-~l~~~------------------~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~ 329 (751)
..+.+ ++++. ..... .+... ...+. ++|+|||+.|+.... ...|.+.|
T Consensus 172 ----~dg~v-lWd~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~----Dg~i~lWd 239 (902)
T 2oaj_A 172 ----EYVTL-TYSLV---ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE----DNSLVFWD 239 (902)
T ss_dssp ----SSCEE-EEETT---TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET----TCCEEEEE
T ss_pred ----CCCcE-EEECC---CCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC----CCeEEEEE
Confidence 23467 78775 22221 11111 13466 999999998887662 23566666
Q ss_pred CCCC
Q 004475 330 PGSK 333 (751)
Q Consensus 330 ~~~~ 333 (751)
+.++
T Consensus 240 ~~~g 243 (902)
T 2oaj_A 240 ANSG 243 (902)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 6653
No 386
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.07 E-value=2.5e-08 Score=103.42 Aligned_cols=208 Identities=10% Similarity=0.016 Sum_probs=119.0
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~ 85 (751)
++.+|++.+ ++........ .+....++++++.++.+. .+...|.++|+.+++.........
T Consensus 41 ~~~iw~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~d~~v~iWd~~~~~~~~~~~~~~--- 101 (355)
T 3vu4_A 41 SFEIYNVHP----VAHIMSQEMR---HLSKVRMLHRTNYVAFVT---------GVKEVVHIWDDVKKQDVSRIKVDA--- 101 (355)
T ss_dssp EEEEEEETT----EEEEEEEECS---CCCEEEECTTSSEEEEEC---------SSTTEEEEEETTTTEEEEEEECSS---
T ss_pred EEEEEecCC----cceeeeeecC---CeEEEEEcCCCCEEEEEE---------CCccEEEEEECCCCcEEEEEECCC---
Confidence 577888877 6554433221 366788999999998864 233589999998887544322222
Q ss_pred cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-
Q 004475 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (751)
Q Consensus 86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 164 (751)
.+..+.|++++..+ ... ..|+++++
T Consensus 102 --~v~~v~~~~~~~~~--~~~--------------------------------------------------~~i~i~d~~ 127 (355)
T 3vu4_A 102 --PVKDLFLSREFIVV--SYG--------------------------------------------------DVISVFKFG 127 (355)
T ss_dssp --CEEEEEECSSEEEE--EET--------------------------------------------------TEEEEEESS
T ss_pred --ceEEEEEcCCEEEE--EEc--------------------------------------------------CEEEEEECC
Confidence 36778888876333 211 36778888
Q ss_pred CC-C-ceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCC--CCCCC--CccC
Q 004475 165 DG-T-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP--AEDIP--VCYN 238 (751)
Q Consensus 165 ~G-~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--~~~~~--~~~~ 238 (751)
++ + ...+. ......++++ +.+++.+... ...+.+||+.++.......... ....| ..+.
T Consensus 128 ~~~~~~~~~~--~~~~~~~~s~--~~la~~sg~~-----------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~ 192 (355)
T 3vu4_A 128 NPWKRITDDI--RFGGVCEFSN--GLLVYSNEFN-----------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK 192 (355)
T ss_dssp TTCCBSSCCE--EEEEEEEEET--TEEEEEESSC-----------TTCEEEEECCC------------------CCEEEC
T ss_pred CCceeeEEec--cCCceEEEEc--cEEEEeCCCc-----------CcEEEEEECCCCCccccccccccccccCcccEEEE
Confidence 43 2 22221 1233455666 6777752221 3468899998654100000000 00000 1122
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccc-eeeccCCCCCCCCceEeE-e-eceeEE-EEEecCCceEEE
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI-IYTQPAEPAEGEKPEILH-K-LDLRFS-VSWCDDSLALVN 314 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~l~-~-~~~~~~-~~~spdg~~l~~ 314 (751)
.....+..++|||||+. |+..+ ..+. +.++++.. +.....+. . ....+. ++|||||+.|+.
T Consensus 193 ~h~~~v~~~~~s~~g~~-l~s~s------------~d~~~v~iwd~~~--~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s 257 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDM-VATCS------------QDGTIIRVFKTED--GVLVREFRRGLDRADVVDMKWSTDGSKLAV 257 (355)
T ss_dssp CCSSCEEEEEECTTSSE-EEEEE------------TTCSEEEEEETTT--CCEEEEEECTTCCSCEEEEEECTTSCEEEE
T ss_pred ccCCceEEEEECCCCCE-EEEEe------------CCCCEEEEEECCC--CcEEEEEEcCCCCCcEEEEEECCCCCEEEE
Confidence 33345778999999997 55544 2355 88888851 23334444 1 455677 999999999887
Q ss_pred ee
Q 004475 315 ET 316 (751)
Q Consensus 315 ~~ 316 (751)
.+
T Consensus 258 ~s 259 (355)
T 3vu4_A 258 VS 259 (355)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 387
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.06 E-value=3.4e-08 Score=101.62 Aligned_cols=191 Identities=9% Similarity=0.028 Sum_probs=105.3
Q ss_pred eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC
Q 004475 88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG 166 (751)
Q Consensus 88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G 166 (751)
.+..++|+|||++|+..+.+ ..|.++++ ++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~d-------------------------------------------------g~i~iw~~~~~ 43 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSD-------------------------------------------------QHIKVFKLDKD 43 (351)
T ss_dssp CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEEECSS
T ss_pred ceeEEEEcCCCCEEEEeeCC-------------------------------------------------CeEEEEECCCC
Confidence 47889999999999887432 35666666 33
Q ss_pred --C---ceecCCC-ceEEeeeeCC--CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475 167 --T---AKDFGTP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (751)
Q Consensus 167 --~---~~~lt~~-~~~~~~~~Sp--DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (751)
. ...+..+ ..+..++|+| ||++|+....+ ..+.+||+.+++........ .....+.
T Consensus 44 ~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-------------g~v~vwd~~~~~~~~~~~~~---~~~~~~~ 107 (351)
T 3f3f_A 44 TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-------------KTVKLWEEDPDQEECSGRRW---NKLCTLN 107 (351)
T ss_dssp SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-------------SCEEEEEECTTSCTTSSCSE---EEEEEEC
T ss_pred CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-------------CeEEEEecCCCcccccccCc---ceeeeec
Confidence 1 1223334 7788999999 68888876543 35889998765321000000 0000111
Q ss_pred CccCCCceeeeecC--CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE-------------eeceeEE-
Q 004475 239 SVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-------------KLDLRFS- 302 (751)
Q Consensus 239 ~~~~~~~~~~~spd--G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-------------~~~~~~~- 302 (751)
.....+..+.|+|+ ++. ++... ..+.|+++++.. +.....+. .....+.
T Consensus 108 ~~~~~v~~~~~~~~~~~~~-l~~~~------------~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLK-LACLG------------NDGILRLYDALE--PSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp CCSSCEEEEEECCGGGCSE-EEEEE------------TTCEEEEEECSS--TTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred ccCCceeEEEEcCCCCCcE-EEEec------------CCCcEEEecCCC--hHHhccccccccccccccccCCcccceeE
Confidence 22234668999999 887 55543 235788888742 11111111 1223345
Q ss_pred EEEecC---CceEEEeeeecccceeEEEecCCCCCCcceeee--ecccccccCCCCCCCeeeCCCC----CEEEEee
Q 004475 303 VSWCDD---SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTG----TNVIAKI 370 (751)
Q Consensus 303 ~~~spd---g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~spDG----~~l~~~~ 370 (751)
+.|+|+ +..|+..... ..+.......+ ....+. ......+.. ++|+|+| +.|+..+
T Consensus 173 ~~~~p~~~~~~~l~~~~~~----~~~~~~~~~~~--~~~~~~~~~~h~~~i~~------~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALE----QAIIYQRGKDG--KLHVAAKLPGHKSLIRS------ISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp EEECCCSSSCCEEEEEETT----EEEEEEECTTS--CEEEEEECCCCCSCEEE------EEECCCSSCSSEEEEEEE
T ss_pred EEeccCCCCCcEEEEecCC----CcEEEEccCCC--ceeeeeecCCCCcceeE------EEECCCCCCcceEEEEEc
Confidence 899998 7877766522 22333333332 222221 112222222 7899998 6676666
No 388
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=6.6e-09 Score=119.41 Aligned_cols=247 Identities=9% Similarity=0.019 Sum_probs=145.3
Q ss_pred eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC
Q 004475 88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG 166 (751)
Q Consensus 88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G 166 (751)
.+..++|+|||++|+....+ +.|.++++ ++
T Consensus 11 ~V~~l~~s~dg~~latg~~d-------------------------------------------------g~I~vwd~~~~ 41 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD-------------------------------------------------KTIKIFEVEGE 41 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT-------------------------------------------------TEEEEEEEETT
T ss_pred eeEEEEECCCCCeEEEEECC-------------------------------------------------CcEEEEecCCC
Confidence 47788999999998887432 35666666 33
Q ss_pred ---CceecCCC-ceEEeeeeCCC--CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCc
Q 004475 167 ---TAKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 167 ---~~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
....+..+ ..+..++|+|+ |++|+..+.+ ..|.+||+.++....+... ...
T Consensus 42 ~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------------g~I~vwd~~~~~~~~~~~~----------~~h 98 (753)
T 3jro_A 42 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------------GKVLIWKEENGRWSQIAVH----------AVH 98 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-------------SCEEEEEEETTEEEEEEEE----------CCC
T ss_pred CCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-------------CeEEEEECCCCcccccccc----------cCC
Confidence 23344444 77889999998 8888876543 3688999987753322111 112
Q ss_pred cCCCceeeeecC--CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEec----------
Q 004475 241 REGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCD---------- 307 (751)
Q Consensus 241 ~~~~~~~~~spd--G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~sp---------- 307 (751)
...+..+.|+|+ |+. ++... ..+.|.++++...+......+......+. +.|+|
T Consensus 99 ~~~V~~v~~sp~~~~~~-l~sgs------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPL-LLVAS------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp SSCEEEEEECCGGGCSE-EEEEE------------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCCeEEEEECCCCCCCE-EEEEe------------CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 234668999999 776 55543 33578888885222223344445566677 99999
Q ss_pred ---CCceEEEeeeecccceeEEEecCCCCCCcceee--eecccccccCCCCCCCeeeCCC---CCEEEEeeeecCCcceE
Q 004475 308 ---DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTST---GTNVIAKIKKENDEQIY 379 (751)
Q Consensus 308 ---dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~spD---G~~l~~~~~~~~~~~~~ 379 (751)
|++.|+.+.. .+ .|.+.++.++......+ .......+.. ++|+|+ |+.|+..+.+
T Consensus 166 ~~~d~~~l~sgs~--dg--~I~iwd~~~~~~~~~~~~~~~~h~~~V~~------l~~sp~~~~~~~l~s~s~D------- 228 (753)
T 3jro_A 166 GTKESRKFVTGGA--DN--LVKIWKYNSDAQTYVLESTLEGHSDWVRD------VAWSPTVLLRSYLASVSQD------- 228 (753)
T ss_dssp -CGGGCCEEEEET--TS--CEEEEEEETTTTEEEEEEEECCCSSCEEE------EEECCCCSSSEEEEEEESS-------
T ss_pred cCCCCCEEEEEEC--CC--eEEEEeccCCcccceeeeeecCCCCcEEE------EEeccCCCCCCEEEEEecC-------
Confidence 5888877663 23 34444444321111121 1122222222 889999 8888777732
Q ss_pred EEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 380 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
..|.+||+.+++......... ..........++|+|||+.++... . -+.++++++.
T Consensus 229 --------------g~I~iwd~~~~~~~~~~~~~~------~~~~~~~v~~l~~spdg~~l~s~s-~---Dg~I~vwd~~ 284 (753)
T 3jro_A 229 --------------RTCIIWTQDNEQGPWKKTLLK------EEKFPDVLWRASWSLSGNVLALSG-G---DNKVTLWKEN 284 (753)
T ss_dssp --------------SCEEEEEESSSSSCCBCCBSS------SSCCSSCCCCEEECTTTCCEEEEC-S---SSCEECCBCC
T ss_pred --------------CEEEEecCCCCCCcceeEEec------cCCCCCceEEEEEcCCCCEEEEEc-C---CCEEEEEecC
Confidence 268888988764221111000 000111223468999998776543 2 2457777776
Q ss_pred C
Q 004475 460 L 460 (751)
Q Consensus 460 ~ 460 (751)
+
T Consensus 285 ~ 285 (753)
T 3jro_A 285 L 285 (753)
T ss_dssp S
T ss_pred C
Confidence 4
No 389
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.9e-08 Score=107.79 Aligned_cols=299 Identities=12% Similarity=0.051 Sum_probs=159.2
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEec-CCcEEEEeecCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRD 111 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~ 111 (751)
...+.|+|||+.++... . ++..+.....+..+... .+..++|+| ||++|+..+.+
T Consensus 30 ~~~~~f~~~~~~~~~~~--------------~--w~~~g~~~~~~~~~h~~----~V~~~~~s~~~~~~l~s~s~d---- 85 (437)
T 3gre_A 30 RDYKEFGPIQEIVRSPN--------------M--GNLRGKLIATLMENEPN----SITSSAVSPGETPYLITGSDQ---- 85 (437)
T ss_dssp GGCGGGCCCCCCCCCCC--------------G--GGCCCCEEEEECTTTTS----CEEEEEEECSSSCEEEEEETT----
T ss_pred hchhhcCCccccccccc--------------c--ccccceEEeeeccCCCC----ceEEEEECCCCCCEEEEecCC----
Confidence 35678999999988732 1 23323223333222211 478899999 99999887543
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-C---CC-c---eecCCCceEEeeeeC
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---GT-A---KDFGTPAVYTAVEPS 183 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---G~-~---~~lt~~~~~~~~~~S 183 (751)
..|.++++ + +. . ..+.....+..++|+
T Consensus 86 ---------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 120 (437)
T 3gre_A 86 ---------------------------------------------GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMI 120 (437)
T ss_dssp ---------------------------------------------SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEEC
T ss_pred ---------------------------------------------ceEEEeECcccccCcccceeeeccCCCCEEEEEEe
Confidence 35666666 3 32 1 111222678899999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCC---Ccee-eeeccCCCCCCCCCccCC--ccCCCceee--eecCCCc
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD---GKLV-RELCDLPPAEDIPVCYNS--VREGMRSIS--WRADKPS 255 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~---~~~~-~~l~~~~~~~~~~~~~~~--~~~~~~~~~--~spdG~~ 255 (751)
||++.|+..+.+ ..+.+||++ .++. +.+...... ...+.. ....+..+. ++||++.
T Consensus 121 ~~~~~l~s~s~d-------------g~i~vwd~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T 3gre_A 121 PNFDAFAVSSKD-------------GQIIVLKVNHYQQESEVKFLNCECIR---KINLKNFGKNEYAVRMRAFVNEEKSL 184 (437)
T ss_dssp TTSSEEEEEETT-------------SEEEEEEEEEEEETTEEEEEEEEEEE---EEEGGGGSSCCCEEEEEEEECSSCEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEeccccCCceeeccccceeE---EEEccCcccccCceEEEEEEcCCCCE
Confidence 999998876543 357788874 2211 111100000 000000 111222333 6678876
Q ss_pred eEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe--eceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
++... ..+.|.++++.. +.....+.. ....+. +.|+|+++.|+.+.. ...|.+.++.+
T Consensus 185 -l~~~~------------~d~~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----dg~i~iwd~~~ 245 (437)
T 3gre_A 185 -LVALT------------NLSRVIIFDIRT--LERLQIIENSPRHGAVSSICIDEECCVLILGTT----RGIIDIWDIRF 245 (437)
T ss_dssp -EEEEE------------TTSEEEEEETTT--CCEEEEEECCGGGCCEEEEEECTTSCEEEEEET----TSCEEEEETTT
T ss_pred -EEEEe------------CCCeEEEEeCCC--CeeeEEEccCCCCCceEEEEECCCCCEEEEEcC----CCeEEEEEcCC
Confidence 55543 336889999851 222333333 345677 999999998887662 23566667666
Q ss_pred CCCcceeeee-cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475 333 KDVAPRVLFD-RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 411 (751)
Q Consensus 333 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 411 (751)
+ ....... .....+...... +.|+|||+.|+..+.+ ..|++||+.+++....+.
T Consensus 246 ~--~~~~~~~~~~~~~v~~~~~~--~~~s~~~~~l~s~~~d---------------------g~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 246 N--VLIRSWSFGDHAPITHVEVC--QFYGKNSVIVVGGSSK---------------------TFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp T--EEEEEEBCTTCEEEEEEEEC--TTTCTTEEEEEEESTT---------------------EEEEEEETTTTEEEEEEE
T ss_pred c--cEEEEEecCCCCceEEEEec--cccCCCccEEEEEcCC---------------------CcEEEEEcCCCcEEEEEE
Confidence 3 2222111 111111110000 2577888888776632 378999998887655443
Q ss_pred ccch-hh-hh-ce----------ee--eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 412 SNRE-KY-FE-TA----------VA--LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 412 ~~~~-~~-~~-~~----------~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
.... .. .. .. .. .......++|+ ++ .++++... -+.|.++|+.+++..+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~---d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEA---TSSIVMFSLNELSSSK 364 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGG---GTEEEEEETTCGGGCE
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCC---CCeEEEEECCCcccce
Confidence 2210 00 00 00 00 00111225777 55 44445433 3479999998876443
No 390
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=7e-08 Score=98.64 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=134.4
Q ss_pred cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (751)
Q Consensus 34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 113 (751)
..|+|+||++.++|+. .....|+++++++++.+.+.. +. .+..++|+|||+.++.. .
T Consensus 52 egp~~~~~~~~l~~~d---------~~~~~i~~~d~~~~~~~~~~~-~~-----~v~~i~~~~dg~l~v~~-~------- 108 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFN---------ILERELHELHLASGRKTVHAL-PF-----MGSALAKISDSKQLIAS-D------- 108 (326)
T ss_dssp EEEEEETTTTEEEEEE---------GGGTEEEEEETTTTEEEEEEC-SS-----CEEEEEEEETTEEEEEE-T-------
T ss_pred cCCeEeCCCCEEEEEE---------CCCCEEEEEECCCCcEEEEEC-CC-----cceEEEEeCCCeEEEEE-C-------
Confidence 5799999999998874 234689999999887766543 22 35778999999866643 1
Q ss_pred CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC------ceEEeeeeCCCC
Q 004475 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPDQ 186 (751)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~------~~~~~~~~SpDG 186 (751)
..|++++. +|+.+.+... ..+..+.++|||
T Consensus 109 -------------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 145 (326)
T 2ghs_A 109 -------------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG 145 (326)
T ss_dssp -------------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS
T ss_pred -------------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC
Confidence 25888888 6666555321 346789999999
Q ss_pred ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
+ |++...... .......||+++ + ++.+.+.... .....++|+|||+. ++++..
T Consensus 146 ~-l~v~~~~~~------~~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~-lyv~~~---- 198 (326)
T 2ghs_A 146 A-LWIGTMGRK------AETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTT-GYFVDT---- 198 (326)
T ss_dssp C-EEEEEEETT------CCTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCE-EEEEET----
T ss_pred C-EEEEeCCCc------CCCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCE-EEEEEC----
Confidence 8 455443211 001135788888 4 4444432110 11337899999998 666541
Q ss_pred CCccccCcccceeeccCCCCCC-C--CceEeEee---ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee
Q 004475 267 DANVEVSPRDIIYTQPAEPAEG-E--KPEILHKL---DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 339 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~-~--~~~~l~~~---~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (751)
..+.|++++++..++ . ..+.+... .+... +.++++|. |+++.. ....|+++++++. ....
T Consensus 199 -------~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~---~~~~v~~~d~~g~--~~~~ 265 (326)
T 2ghs_A 199 -------KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARW---GEGAVDRYDTDGN--HIAR 265 (326)
T ss_dssp -------TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEE---TTTEEEEECTTCC--EEEE
T ss_pred -------CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEe---CCCEEEEECCCCC--EEEE
Confidence 125788888641122 1 12223221 23344 78899997 443331 1247888988542 2222
Q ss_pred eeecccccccCCCCCCCeeeC-CCCCEEEEeee
Q 004475 340 LFDRVFENVYSDPGSPMMTRT-STGTNVIAKIK 371 (751)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~s-pDG~~l~~~~~ 371 (751)
+. ........ ++|+ +|++.|++...
T Consensus 266 i~-~~~~~~~~------~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 266 YE-VPGKQTTC------PAFIGPDASRLLVTSA 291 (326)
T ss_dssp EE-CSCSBEEE------EEEESTTSCEEEEEEB
T ss_pred EE-CCCCCcEE------EEEecCCCCEEEEEec
Confidence 22 11111111 7787 89988877763
No 391
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.02 E-value=2.7e-10 Score=123.36 Aligned_cols=211 Identities=16% Similarity=0.061 Sum_probs=121.4
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH-HhCCeEEEEcCCCC-CCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIP-IIGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~v~~~~~~~-~~g~g~~ 571 (751)
+...+|.|...... .++|+||++|||||..++. ..+. ...... ..+|++|+.++|+- ..|++..
T Consensus 86 l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~----~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~ 151 (522)
T 1ukc_A 86 LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSN--------ANYN----GTQVIQASDDVIVFVTFNYRVGALGFLAS 151 (522)
T ss_dssp CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCS--------CSCC----CHHHHHHTTSCCEEEEECCCCHHHHHCCC
T ss_pred CEEEEEECCCCCCC--CCCCEEEEECCCccccCCc--------cccC----cHHHHHhcCCcEEEEEecccccccccccc
Confidence 56778888754322 3589999999998765432 1111 111211 25699999988863 2244332
Q ss_pred CCC--chhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEccCCCCCCCCc
Q 004475 572 LPN--DRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLTP 642 (751)
Q Consensus 572 ~~~--~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~~d~~~~~ 642 (751)
... .......+.|+..+++|++++. ..|+++|.|+|+|+||+++..++... +..|+++|+.+|........
T Consensus 152 ~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~ 231 (522)
T 1ukc_A 152 EKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTV 231 (522)
T ss_dssp HHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCS
T ss_pred hhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCH
Confidence 110 0012456889999999998852 36899999999999999888777653 56899999999975422111
Q ss_pred cCccc-------ccccc--hhhHHHHHhcCccc---------ccCCCCCC--EEEEEcCCCCCCCCChHHHHHHHHHHHh
Q 004475 643 FGFQT-------EFRTL--WEATNVYIEMSPIT---------HANKIKKP--ILIIHGEVDDKVGLFPMQAERFFDALKG 702 (751)
Q Consensus 643 ~~~~~-------~~~~~--~~~~~~~~~~~~~~---------~~~~~~~P--~li~~G~~D~~vp~~~~~~~~~~~~l~~ 702 (751)
..... ..... -...+.+...+... .......| .+.++...|..+. +....++.+.-..
T Consensus 232 ~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~p~~~~~~g~~ 309 (522)
T 1ukc_A 232 SEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDELYNAFDAGNF 309 (522)
T ss_dssp GGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSCHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCCHHHHHhcCCC
Confidence 00000 00000 00111222222111 01112233 4556677776664 5666666655444
Q ss_pred CCCcEEEEEeCCCCCcCC
Q 004475 703 HGALSRLVLLPFEHHVYA 720 (751)
Q Consensus 703 ~~~~~~~~~~~~~~H~~~ 720 (751)
.++++-+-...+++|.+.
T Consensus 310 ~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 310 IKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp CCCCEEEEEETBGGGGTS
T ss_pred CCCCEEEEeecchhHHhh
Confidence 556666667788888764
No 392
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.01 E-value=8.9e-08 Score=98.73 Aligned_cols=240 Identities=8% Similarity=-0.027 Sum_probs=133.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCC-------CCeEEEEEeecccccccCCceeEEEEEcCCCC-eee
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD-------GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-AKP 76 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPD-------G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-~~~ 76 (751)
..|++||+.+ |+...... ...+....|+|+ |...++ +....+.+++..+++ .+.
T Consensus 58 g~v~iwd~~~----~~~~~~~~---~~~v~~~~~~~~~~s~s~D~~i~~w-----------~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 58 GALHFTQLKD----SKTITTIT---TPNPRTGGEHPAIISRGPCNRLLLL-----------YPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp TEEEEEEESS----SSCEEEEE---EECCCTTCCCCSEEEECSTTEEEEE-----------ETTTEEEEEETTTCCEEEE
T ss_pred CcEEEEECCC----CcEEEEEe---cCCceeeeeCCceEEecCCCeEEEE-----------EccCceEEeecCCcceeEE
Confidence 4689999988 76543221 123455556665 322222 222344455666665 333
Q ss_pred ccCCCCccccceeeeeEEec--CCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhh
Q 004475 77 LFESPDICLNAVFGSFVWVN--NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (751)
Q Consensus 77 lt~~~~~~~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (751)
+..... ..+..++|+| +|+.|+..+.+
T Consensus 120 ~~~~~~----~~v~~~~~~~~~~~~~l~s~s~d----------------------------------------------- 148 (343)
T 3lrv_A 120 IEVDSA----NEIIYMYGHNEVNTEYFIWADNR----------------------------------------------- 148 (343)
T ss_dssp EECCCS----SCEEEEECCC---CCEEEEEETT-----------------------------------------------
T ss_pred eecCCC----CCEEEEEcCCCCCCCEEEEEeCC-----------------------------------------------
Confidence 321111 1367889999 99998877542
Q ss_pred eeeEEEEEcC-CCCceecC-C-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee--eeccCC
Q 004475 155 TTAQLVLGSL-DGTAKDFG-T-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR--ELCDLP 228 (751)
Q Consensus 155 ~~~~l~~~~~-~G~~~~lt-~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l~~~~ 228 (751)
..|.++|+ +++...+. . . ..+..++|+|||+.|+....+ ..|.+||+.+++.. .+..
T Consensus 149 --g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~~-- 211 (343)
T 3lrv_A 149 --GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------------GILDVYNLSSPDQASSRFPV-- 211 (343)
T ss_dssp --CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------------SCEEEEESSCTTSCCEECCC--
T ss_pred --CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCCCCccEEec--
Confidence 46777888 66543332 2 2 457899999999988875433 46889999876533 2211
Q ss_pred CCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe---eceeE--E-
Q 004475 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LDLRF--S- 302 (751)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~---~~~~~--~- 302 (751)
.....+..++|+|||+. |+..+ .+.|.++|+.. ......+.. ....+ .
T Consensus 212 ----------~h~~~v~~l~fs~~g~~-l~s~~-------------~~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 212 ----------DEEAKIKEVKFADNGYW-MVVEC-------------DQTVVCFDLRK--DVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp ----------CTTSCEEEEEECTTSSE-EEEEE-------------SSBEEEEETTS--STTCBSSCCCBC-----CCEE
T ss_pred ----------cCCCCEEEEEEeCCCCE-EEEEe-------------CCeEEEEEcCC--CCcceeecccccccccccceE
Confidence 01234678999999997 55543 12678888752 111111111 11111 3
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCC---CCCEEEEeee
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS---TGTNVIAKIK 371 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp---DG~~l~~~~~ 371 (751)
++|+|+|++|+..+.. +..-.||.++.... ... . ..... .+|++ +++.|++.+.
T Consensus 266 ~~~~~~g~~l~~~s~~-d~~i~v~~~~~~~~--~~~-~--~~~~~---------~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNE-SNSLTIYKFDKKTK--NWT-K--DEESA---------LCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp EEECTTSSEEEEEETT-TTEEEEEEECTTTC--SEE-E--EEEEE---------CCC----CCCCEEEEEEE
T ss_pred EEECCCCCEEEEecCC-CCcEEEEEEccccc--ceE-e--cCcee---------EecCccccccceeEEEec
Confidence 7899999998875521 23345666544332 111 1 11111 44677 8888777773
No 393
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.00 E-value=9.7e-09 Score=111.74 Aligned_cols=144 Identities=9% Similarity=-0.024 Sum_probs=84.0
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce-ee-eeccCCCCCCCCCccCCccCCCcee--eee
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VR-ELCDLPPAEDIPVCYNSVREGMRSI--SWR 250 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~--~~s 250 (751)
..+..++|+|++ .|+..+. +..+.+||+.++. .. .+. .....+..+ .|+
T Consensus 267 ~~v~sv~~s~~~-~lasgs~-------------DgtV~lWD~~~~~~~~~~~~-------------~H~~~V~sv~~~~s 319 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFK-------------NGFVAEFDLTDPEVPSFYDQ-------------VHDSYILSVSTAYS 319 (524)
T ss_dssp TCEEEEEESSSS-EEEEEET-------------TSEEEEEETTBCSSCSEEEE-------------CSSSCEEEEEEECC
T ss_pred CCEEEEEecCCC-eEEEEeC-------------CCEEEEEECCCCCCceEEee-------------cccccEEEEEEEcC
Confidence 678899999875 5655433 3468899998542 11 121 122335666 689
Q ss_pred cCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec--eeEE-EEEecCCceEEEeeeecccceeEEE
Q 004475 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFS-VSWCDDSLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 251 pdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~-~~~spdg~~l~~~~~~~~~~~~l~~ 327 (751)
|+|..+|+-++ ..+.+.++|+.. +.....+.... ..+. ++|+||++.|+.+.. ...|.+
T Consensus 320 ~~g~~~laS~S------------~D~tvklWD~~~--~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~----d~tv~l 381 (524)
T 2j04_B 320 DFEDTVVSTVA------------VDGYFYIFNPKD--IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG----ASSLRA 381 (524)
T ss_dssp TTSCCEEEEEE------------TTSEEEEECGGG--HHHHCEEEEECSCCSCCCEEEETTTTEEEEECS----SSEEEE
T ss_pred CCCCeEEEEec------------cCCeEEEEECCC--CCcccccccccccCcccceEeCCCcCeEEEeCC----CCcEEE
Confidence 99854244443 335788888741 11222333222 2345 899999998776542 234566
Q ss_pred ecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 328 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 328 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
.++.++ .....+.. ....+.. ++|||||+.|+..+.
T Consensus 382 wd~~~~-~~~~~l~g-H~~~V~s------va~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 382 VPSRAA-FAVHPLVS-RETTITA------IGVSRLHPMVLAGSA 417 (524)
T ss_dssp EETTCT-TCCEEEEE-CSSCEEE------EECCSSCCBCEEEET
T ss_pred EECccc-ccceeeec-CCCceEE------EEeCCCCCeEEEEEC
Confidence 666654 22233332 3333333 889999999887773
No 394
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.00 E-value=4e-08 Score=100.44 Aligned_cols=213 Identities=11% Similarity=0.047 Sum_probs=129.7
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|++++..+ ++.+.+. .+ ..+....|+|||+.++.. . ..|+++++++|+.+.+.......
T Consensus 71 ~~i~~~d~~~----~~~~~~~-~~--~~v~~i~~~~dg~l~v~~----------~--~gl~~~d~~~g~~~~~~~~~~~~ 131 (326)
T 2ghs_A 71 RELHELHLAS----GRKTVHA-LP--FMGSALAKISDSKQLIAS----------D--DGLFLRDTATGVLTLHAELESDL 131 (326)
T ss_dssp TEEEEEETTT----TEEEEEE-CS--SCEEEEEEEETTEEEEEE----------T--TEEEEEETTTCCEEEEECSSTTC
T ss_pred CEEEEEECCC----CcEEEEE-CC--CcceEEEEeCCCeEEEEE----------C--CCEEEEECCCCcEEEEeeCCCCC
Confidence 4688888877 7766554 23 246778899999876652 1 34999999999877765432111
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
....+..++++|||+ |++......... ....||+++
T Consensus 132 ~~~~~~~i~~d~~G~-l~v~~~~~~~~~------------------------------------------~~~~l~~~~- 167 (326)
T 2ghs_A 132 PGNRSNDGRMHPSGA-LWIGTMGRKAET------------------------------------------GAGSIYHVA- 167 (326)
T ss_dssp TTEEEEEEEECTTSC-EEEEEEETTCCT------------------------------------------TCEEEEEEE-
T ss_pred CCCCCCCEEECCCCC-EEEEeCCCcCCC------------------------------------------CceEEEEEe-
Confidence 011356889999998 555432110000 115789998
Q ss_pred CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC--Cc-ee---eeeccCCCCCCCCCcc
Q 004475 165 DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GK-LV---RELCDLPPAEDIPVCY 237 (751)
Q Consensus 165 ~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~-~~---~~l~~~~~~~~~~~~~ 237 (751)
+|+.+.+... .....++|||||+.|++.... ...|++++.+ ++ .. +.+.....
T Consensus 168 ~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-------- 227 (326)
T 2ghs_A 168 KGKVTKLFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLDARTGLPTGKAEVFIDSTG-------- 227 (326)
T ss_dssp TTEEEEEEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBCTTTCCBSSCCEEEEECTT--------
T ss_pred CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC------------CCEEEEEEcccccCCcccCceEEEECCC--------
Confidence 7866665433 445688999999999886432 3468899875 44 32 11111110
Q ss_pred CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEe-cCCceEEEe
Q 004475 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWC-DDSLALVNE 315 (751)
Q Consensus 238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~s-pdg~~l~~~ 315 (751)
....+..+.+++||+ |+++.. ..+.|++++.+ +.....+........ ++|+ ||++.|+++
T Consensus 228 --~~~~p~gi~~d~~G~--lwva~~-----------~~~~v~~~d~~---g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 228 --IKGGMDGSVCDAEGH--IWNARW-----------GEGAVDRYDTD---GNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp --SSSEEEEEEECTTSC--EEEEEE-----------TTTEEEEECTT---CCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred --CCCCCCeeEECCCCC--EEEEEe-----------CCCEEEEECCC---CCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 111234788999996 444321 12468888764 433344433333455 8898 999988776
Q ss_pred eee
Q 004475 316 TWY 318 (751)
Q Consensus 316 ~~~ 318 (751)
+..
T Consensus 290 ~~~ 292 (326)
T 2ghs_A 290 SAR 292 (326)
T ss_dssp EBC
T ss_pred ecC
Confidence 643
No 395
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.99 E-value=6.4e-10 Score=117.53 Aligned_cols=184 Identities=9% Similarity=0.012 Sum_probs=111.5
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCCc--hhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~ 588 (751)
.|+||++||.+. +. ...|.......|++ .||.|++ .+.+|+|.+.... .......+|+.++
T Consensus 70 ~~~vvllHG~~~-----------s~--~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~g~s~~~~~~~~~~~~~~dl~~~ 133 (432)
T 1gpl_A 70 RKTRFIIHGFTD-----------SG--ENSWLSDMCKNMFQVEKVNCIC---VDWKGGSKAQYSQASQNIRVVGAEVAYL 133 (432)
T ss_dssp SEEEEEECCTTC-----------CT--TSHHHHHHHHHHHHHCCEEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------CC--CchHHHHHHHHHHhcCCcEEEE---EECccccCccchhhHhhHHHHHHHHHHH
Confidence 689999999631 11 01111123455665 7999999 5556666653211 1234556888899
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCccccc
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA 668 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (751)
++++.++..++.++|.++||||||++|+.++.++|+++++++++.|........ . +...+
T Consensus 134 i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~----~----------------~~~~l 193 (432)
T 1gpl_A 134 VQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT----P----------------EEVRL 193 (432)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC----C----------------TTTSC
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC----C----------------hhhcc
Confidence 999976544567899999999999999999999999999999888753211000 0 00000
Q ss_pred -CCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc-cHHHHHHHHHHHHHHHh
Q 004475 669 -NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYC 740 (751)
Q Consensus 669 -~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~~l 740 (751)
.....++.+||+..|.+|| ... +.... .-.++..||+++|....-. .......+...|+.+.+
T Consensus 194 ~~~da~~V~vIHt~~d~lVP--~~~----~g~~~---~lg~~dfypngg~~qpgc~~~~~Csh~ra~~~~~esi 258 (432)
T 1gpl_A 194 DPSDAKFVDVIHTDISPILP--SLG----FGMSQ---KVGHMDFFPNGGKDMPGCKTGISCNHHRSIEYYHSSI 258 (432)
T ss_dssp CGGGSSEEEEECSCCSCHHH--HCC----CBCSS---CCSSEEEEEGGGSSCTTCSSCTTHHHHHHHHHHHHHH
T ss_pred CcCCCceEEEEEcCCccccc--ccc----ccccc---cccceEEccCCCCCCCCCCcccccchhhHHHHHHHHc
Confidence 1234689999999999987 300 00001 1124667899888532111 02233344555554443
No 396
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.99 E-value=2.1e-08 Score=105.62 Aligned_cols=112 Identities=11% Similarity=-0.011 Sum_probs=68.0
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee---ccCCCCccccceeeeeEEec--------CCcEEEEe
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVN--------NSTLLIFT 104 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~---lt~~~~~~~~~~~~~~~wsp--------Dg~~l~~~ 104 (751)
..++|+++.||..+ ....|.++++++++... +....++ ...+..++|+| ||+.|+-.
T Consensus 95 ~~~~~~~~~las~~----------~d~~v~lw~~~~~~~~~~~~~~~~~gH--~~~v~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 95 NSSPVYSLFLACVC----------QDNTVRLIITKNETIITQHVLGGKSGH--HNFVNDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp --CCEEEEEEEEEE----------TTSCEEEEEEETTEEEEEEEECTTTSC--SSCEEEEEEEEEECTTCSEEEEEEEEE
T ss_pred eecCCCCCEEEEEe----------CCCcEEEEECCCCccceeeeecccCCC--CCceEEEEEccccccccCCCCCEEEEE
Confidence 34566676777653 23455566666665322 2111221 12478999998 89999887
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-CceecCCC-ceEEeee
Q 004475 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVE 181 (751)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~lt~~-~~~~~~~ 181 (751)
+.+ ..|.++|+ ++ ....+..+ ..+..++
T Consensus 163 s~D-------------------------------------------------~tv~~Wd~~~~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 163 GDD-------------------------------------------------CTLIIWRLTDEGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp ETT-------------------------------------------------SEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred ECC-------------------------------------------------CeEEEEECCCCceeeeecCCCCCcEEEE
Confidence 553 36677777 44 33333333 6778999
Q ss_pred eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce
Q 004475 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 220 (751)
|+|++..++++... ...+.+||+.+++
T Consensus 194 ~~p~~~~~l~~~~~------------d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 194 FRPSNPNQLIVGER------------NGNIRIFDWTLNL 220 (393)
T ss_dssp EETTEEEEEEEEET------------TSEEEEEETTCCC
T ss_pred ECCCCCceEEecCC------------CCEEEEEECCCCc
Confidence 99999765554433 3468899987654
No 397
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.97 E-value=6.8e-08 Score=99.65 Aligned_cols=182 Identities=10% Similarity=-0.002 Sum_probs=113.0
Q ss_pred ccccceeecC--CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCC
Q 004475 31 AKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (751)
Q Consensus 31 ~~~~~p~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 108 (751)
..+...+|+| +|++|+..+ ....|.++++.+++..++...... ..+..++|+|||+.|+..+.+
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s----------~dg~i~~wd~~~~~~~~~~~~~~~---~~i~~~~~~pdg~~lasg~~d- 191 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWAD----------NRGTIGFQSYEDDSQYIVHSAKSD---VEYSSGVLHKDSLLLALYSPD- 191 (343)
T ss_dssp SCEEEEECCC---CCEEEEEE----------TTCCEEEEESSSSCEEEEECCCSS---CCCCEEEECTTSCEEEEECTT-
T ss_pred CCEEEEEcCCCCCCCEEEEEe----------CCCcEEEEECCCCcEEEEEecCCC---CceEEEEECCCCCEEEEEcCC-
Confidence 3588999999 999998753 346788889988887554432221 136788999999998876432
Q ss_pred CCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-c-eecCC-C-ceEEeeeeC
Q 004475 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-A-KDFGT-P-AVYTAVEPS 183 (751)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~-~~lt~-~-~~~~~~~~S 183 (751)
..|.++|+ +++ . ..+.. + ..+..++|+
T Consensus 192 ------------------------------------------------g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 192 ------------------------------------------------GILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp ------------------------------------------------SCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred ------------------------------------------------CEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 46788888 664 3 45655 4 788999999
Q ss_pred CCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCC--ceeeeecCCCceEEEE
Q 004475 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGM--RSISWRADKPSTLYWV 260 (751)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~--~~~~~spdG~~~i~~~ 260 (751)
|||++|+..+.+ .+.+||+.+.+.. .+..... ....+ ..++|+|+|++ |+..
T Consensus 224 ~~g~~l~s~~~~--------------~v~iwd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~-l~~~ 278 (343)
T 3lrv_A 224 DNGYWMVVECDQ--------------TVVCFDLRKDVGTLAYPTYTI----------PEFKTGTVTYDIDDSGKN-MIAY 278 (343)
T ss_dssp TTSSEEEEEESS--------------BEEEEETTSSTTCBSSCCCBC---------------CCEEEEECTTSSE-EEEE
T ss_pred CCCCEEEEEeCC--------------eEEEEEcCCCCcceeeccccc----------ccccccceEEEECCCCCE-EEEe
Confidence 999999887522 5889999865432 1211100 00111 35899999998 5554
Q ss_pred EeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEec---CCceEEEee
Q 004475 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCD---DSLALVNET 316 (751)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~sp---dg~~l~~~~ 316 (751)
+. ..+.+.+++.+. +...... .... ..|++ +++.|++..
T Consensus 279 s~-----------~d~~i~v~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 279 SN-----------ESNSLTIYKFDK--KTKNWTK----DEESALCLQSDTADFTDMDVVC 321 (343)
T ss_dssp ET-----------TTTEEEEEEECT--TTCSEEE----EEEEECCC----CCCCEEEEEE
T ss_pred cC-----------CCCcEEEEEEcc--cccceEe----cCceeEecCccccccceeEEEe
Confidence 31 023566666531 1111121 2333 56777 777777655
No 398
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.97 E-value=8.7e-08 Score=98.31 Aligned_cols=238 Identities=12% Similarity=0.042 Sum_probs=137.4
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|++++..+ ++.+.+.. .....+...+|+|||+.++.... .......|++++.++++.+.+......
T Consensus 66 ~~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~------~~~~~~~i~~~d~~~~~~~~~~~~~~~- 133 (333)
T 2dg1_A 66 GNIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLG------DFKSTGGIFAATENGDNLQDIIEDLST- 133 (333)
T ss_dssp CEEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECT------TSSSCCEEEEECTTSCSCEEEECSSSS-
T ss_pred CEEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCC------CCCCCceEEEEeCCCCEEEEEEccCcc-
Confidence 4688888887 88776542 12234778899999975544211 001225899999998876643221111
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
...+..++++|||+ |++........ .....||+++.
T Consensus 134 -~~~~~~i~~d~~g~-l~v~~~~~~~~------------------------------------------~~~~~l~~~~~ 169 (333)
T 2dg1_A 134 -AYCIDDMVFDSKGG-FYFTDFRGYST------------------------------------------NPLGGVYYVSP 169 (333)
T ss_dssp -CCCEEEEEECTTSC-EEEEECCCBTT------------------------------------------BCCEEEEEECT
T ss_pred -CCcccceEECCCCC-EEEEecccccc------------------------------------------CCCceEEEEeC
Confidence 11356789999996 44443210000 01257999998
Q ss_pred C-CCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC--ceeeeeccCCCCCCCCCccCCc
Q 004475 165 D-GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG--KLVRELCDLPPAEDIPVCYNSV 240 (751)
Q Consensus 165 ~-G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~ 240 (751)
+ ++.+.+... .....++|+|||++|++.... ...|++|+.++ +....+...... .+. .
T Consensus 170 ~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~------------~~~i~~~d~~~~g~~~~~~~~~~~~-----~~~-~ 231 (333)
T 2dg1_A 170 DFRTVTPIIQNISVANGIALSTDEKVLWVTETT------------ANRLHRIALEDDGVTIQPFGATIPY-----YFT-G 231 (333)
T ss_dssp TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEECTTSSSEEEEEEEEEE-----ECC-S
T ss_pred CCCEEEEeecCCCcccceEECCCCCEEEEEeCC------------CCeEEEEEecCCCcCcccccceEEE-----ecC-C
Confidence 5 466655433 456689999999998886432 24688888853 222221100000 000 0
Q ss_pred cCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece------eEE-EEEecCCceEE
Q 004475 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFS-VSWCDDSLALV 313 (751)
Q Consensus 241 ~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~------~~~-~~~spdg~~l~ 313 (751)
...+..+.+++||+ ++++.. ..+.|++++.+ +.....+..... ... +.|+|||+.|+
T Consensus 232 ~~~~~~i~~d~~G~--l~v~~~-----------~~~~v~~~d~~---g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 232 HEGPDSCCIDSDDN--LYVAMY-----------GQGRVLVFNKR---GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp SSEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECTT---SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred CCCCCceEECCCCC--EEEEEc-----------CCCEEEEECCC---CCEEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 01245789999997 344321 12468888764 433333332211 344 88999998888
Q ss_pred Eeeeec--ccceeEEEecCCC
Q 004475 314 NETWYK--TSQTRTWLVCPGS 332 (751)
Q Consensus 314 ~~~~~~--~~~~~l~~~~~~~ 332 (751)
+++... .....||.++...
T Consensus 296 v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 296 ICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEEECGGGTCCEEEEEEECSS
T ss_pred EEeCccCCCCCceEEEEeccc
Confidence 777542 2345788888764
No 399
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.97 E-value=8.9e-10 Score=120.00 Aligned_cols=128 Identities=20% Similarity=0.188 Sum_probs=87.7
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCC-CCCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PIIGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~-~~~g~g~~ 571 (751)
+...+|.|...... .++|+||++|||||..++. ..+.. ..|+ .+|++|+.++|+ +..|+...
T Consensus 99 l~lnv~~P~~~~~~--~~~Pv~v~iHGG~~~~g~~--------~~~~~------~~la~~~g~vvv~~nYRlg~~gf~~~ 162 (542)
T 2h7c_A 99 LYLNIYTPADLTKK--NRLPVMVWIHGGGLMVGAA--------STYDG------LALAAHENVVVVTIQYRLGIWGFFST 162 (542)
T ss_dssp CEEEEEECSCTTSC--CCEEEEEEECCSTTTSCCS--------TTSCC------HHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred cEEEEEECCCCCCC--CCCCEEEEECCCcccCCCc--------cccCH------HHHHhcCCEEEEecCCCCccccCCCC
Confidence 55668889764332 3589999999998754432 11111 1244 479999998886 22233222
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCC
Q 004475 572 LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 637 (751)
Q Consensus 572 ~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~d 637 (751)
..........+.|+..+++|+++. -..|+++|.|+|+|+||+++..++.. .+..|+++|+.+|...
T Consensus 163 ~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 163 GDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 111111123467899999999875 24689999999999999999998876 3578999999998754
No 400
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.97 E-value=5.2e-07 Score=96.70 Aligned_cols=299 Identities=14% Similarity=0.033 Sum_probs=167.4
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|.+|++.+ ++...... .....+....|+ ++.|+.. ...+.|.++++.+++..........
T Consensus 138 dg~i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~--~~~l~s~----------~~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 138 DNTLKVWSAVT----GKCLRTLV-GHTGGVWSSQMR--DNIIISG----------STDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp TSCEEEEETTT----CCEEEECC-CCSSCEEEEEEE--TTEEEEE----------ETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCcEEEEECCC----CcEEEEEc-CCCCCEEEEEec--CCEEEEE----------eCCCeEEEEECCcCcEEEEECCCCC
Confidence 45789999988 77654321 222356777776 5566664 3346788889888875444332221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..+.|+ ++.|+..+.+ ..|.++|
T Consensus 201 ----~v~~~~~~--~~~l~s~s~d-------------------------------------------------g~i~~wd 225 (445)
T 2ovr_B 201 ----TVRCMHLH--EKRVVSGSRD-------------------------------------------------ATLRVWD 225 (445)
T ss_dssp ----CEEEEEEE--TTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----cEEEEEec--CCEEEEEeCC-------------------------------------------------CEEEEEE
Confidence 35566674 5667766432 4788888
Q ss_pred C-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCC
Q 004475 164 L-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNS 239 (751)
Q Consensus 164 ~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~ 239 (751)
+ +++ ...+..+ ..+..+.| ||+.|+....+ ..+.+||+.+++.. .+..+
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~------------ 278 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-------------FMVKVWDPETETCLHTLQGH------------ 278 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-------------SCEEEEEGGGTEEEEEECCC------------
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-------------CEEEEEECCCCcEeEEecCC------------
Confidence 8 564 3344334 66677777 88888776543 35889998766433 22111
Q ss_pred ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeec
Q 004475 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYK 319 (751)
Q Consensus 240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~ 319 (751)
...+..+.| ||+. ++... ..+.|.++++.. +.....+......+. .++++++.|+...
T Consensus 279 -~~~v~~~~~--~~~~-l~~~~------------~d~~i~i~d~~~--~~~~~~~~~~~~~v~-~~~~~~~~l~~~~--- 336 (445)
T 2ovr_B 279 -TNRVYSLQF--DGIH-VVSGS------------LDTSIRVWDVET--GNCIHTLTGHQSLTS-GMELKDNILVSGN--- 336 (445)
T ss_dssp -SSCEEEEEE--CSSE-EEEEE------------TTSCEEEEETTT--CCEEEEECCCCSCEE-EEEEETTEEEEEE---
T ss_pred -CCceEEEEE--CCCE-EEEEe------------CCCeEEEEECCC--CCEEEEEcCCcccEE-EEEEeCCEEEEEe---
Confidence 122345566 7776 55543 235788888751 222233333333333 4455677776654
Q ss_pred ccceeEEEecCCCCCCcceeeeec-ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEE
Q 004475 320 TSQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL 398 (751)
Q Consensus 320 ~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 398 (751)
....|.+.++.++ ........ ... ..+..+.+.+++.|+..+.+ ..|.+
T Consensus 337 -~dg~i~vwd~~~~--~~~~~~~~~~~~------~~~v~~~~~~~~~l~s~~~d---------------------g~v~i 386 (445)
T 2ovr_B 337 -ADSTVKIWDIKTG--QCLQTLQGPNKH------QSAVTCLQFNKNFVITSSDD---------------------GTVKL 386 (445)
T ss_dssp -TTSCEEEEETTTC--CEEEEECSTTSC------SSCEEEEEECSSEEEEEETT---------------------SEEEE
T ss_pred -CCCeEEEEECCCC--cEEEEEccCCCC------CCCEEEEEECCCEEEEEeCC---------------------CeEEE
Confidence 2245666777664 22222211 101 01112233467777776622 37999
Q ss_pred EecCCCceeEEeec-cchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 399 FDINTGSKERIWES-NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 399 ~d~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
||+.+++....... ........+ ..++|+|++..++...........++++|+..
T Consensus 387 wd~~~~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 387 WDLKTGEFIRNLVTLESGGSGGVV-------WRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EETTTCCEEEEEEECTTGGGTCEE-------EEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EECCCCceeeeeeccccCCCCceE-------EEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99998876544321 100000011 12589999987776655544566788888764
No 401
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.95 E-value=4.1e-09 Score=104.55 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=56.1
Q ss_pred HHHHHHhC--CeEEEEcCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004475 546 SSLIFLAR--RFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 622 (751)
Q Consensus 546 ~~~~~~~~--G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~ 622 (751)
....|.+. |+.|+++ +. |+|.+... ..+.....+++..+++++...... .+++.++||||||.+|..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~~---d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLSL---EI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEEC---CC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEEE---Ee-CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 44555554 8899994 43 66653210 111122344455555666542212 26899999999999999999999
Q ss_pred CCc-eeEEEEccCCC
Q 004475 623 PHL-FCCGIARSGSY 636 (751)
Q Consensus 623 p~~-~~~~v~~~~~~ 636 (751)
|+. ++.+|++++..
T Consensus 102 ~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 102 PSPPMVNLISVGGQH 116 (279)
T ss_dssp CSSCEEEEEEESCCT
T ss_pred CCcccceEEEecCcc
Confidence 984 99999888653
No 402
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.95 E-value=3.9e-06 Score=86.40 Aligned_cols=265 Identities=9% Similarity=-0.024 Sum_probs=126.9
Q ss_pred EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCce
Q 004475 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (751)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~ 256 (751)
...+..+||| |+++..... .+.....+.++|.++.++..-...... + ..-...+.|+|+++.
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~~------~g~~~g~v~vlD~~T~~v~~~~~~~~~---~------~~~~Yd~~~~p~~~~- 201 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGNE------EGEGPGGILMLDHYSFEPLGKWEIDRG---D------QYLAYDFWWNLPNEV- 201 (462)
T ss_dssp EEEEEECSSC--EEEEEEEET------TSCSCCEEEEECTTTCCEEEECCSBCT---T------CCCCCCEEEETTTTE-
T ss_pred ccceeECCCe--EEEEcCCCc------CCCCCCeEEEEECCCCeEEEEEccCCC---C------ccccceEEECCCCCE-
Confidence 3456789999 777665532 233357899999997765432221100 0 011236889999995
Q ss_pred EEEEEec-------cCCCCcc-ccCcccceeeccCCCCCCCC-ceEeEee-c--eeEE--EEEecCCceEEEeeee--cc
Q 004475 257 LYWVEAQ-------DRGDANV-EVSPRDIIYTQPAEPAEGEK-PEILHKL-D--LRFS--VSWCDDSLALVNETWY--KT 320 (751)
Q Consensus 257 i~~~~~~-------~~~~~~~-~~~~~~~l~~~~~~~~~~~~-~~~l~~~-~--~~~~--~~~spdg~~l~~~~~~--~~ 320 (751)
++++.. .+-.... ......+|++++++ +.+ ...+.-. . +... +.++|||++++..... ..
T Consensus 202 -mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~---~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~ 277 (462)
T 2ece_A 202 -LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR---KRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKD 277 (462)
T ss_dssp -EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT---TTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTT
T ss_pred -EEEccCcCccccccccchhhhhhccCCEEEEEECC---CCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccC
Confidence 443310 0000000 00124689999985 222 2222222 1 1222 3459999987766540 11
Q ss_pred cceeEEEecCCCCCCcceeeeecccccc-cC-----------CCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475 321 SQTRTWLVCPGSKDVAPRVLFDRVFENV-YS-----------DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 388 (751)
Q Consensus 321 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~-----------~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~ 388 (751)
..+.|+++..+.+.....++.+.....+ .. ......+.+||||++|++....
T Consensus 278 Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg---------------- 341 (462)
T 2ece_A 278 LSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG---------------- 341 (462)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT----------------
T ss_pred CCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC----------------
Confidence 2345655444333122222211111000 00 0112237899999998887632
Q ss_pred CCCCCceeEEEecC-CCceeEEeeccchhhh---hce--eeeecCCcceeeccCCCEEEEEEe-------c---CCCCCe
Q 004475 389 PEGNIPFLDLFDIN-TGSKERIWESNREKYF---ETA--VALVFGQGEEDINLNQLKILTSKE-------S---KTEITQ 452 (751)
Q Consensus 389 ~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~---~~~--~~~~~~~~~~~~s~dg~~l~~~~~-------~---~~~~~~ 452 (751)
...|.++|+. .++.+.+-....+..+ +.+ ..+...+..+++||||++|+++.+ . ......
T Consensus 342 ----~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~ 417 (462)
T 2ece_A 342 ----IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGW 417 (462)
T ss_dssp ----TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCE
T ss_pred ----CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceE
Confidence 2367777874 3333222111100000 000 011123556899999999998751 1 123455
Q ss_pred EEEE--EcCCCceeEeecCCCCCCCccCCceEEEEEE
Q 004475 453 YHIL--SWPLKKSSQITNFPHPYPTLASLQKEMIKYQ 487 (751)
Q Consensus 453 l~~~--~~~~g~~~~lt~~~~~~~~~~~~~~e~i~~~ 487 (751)
++.+ |.++| .+ ++. +...++......+++++
T Consensus 418 ~~~~~vd~~~G-L~-~~~--~f~vdf~~~~~h~~r~~ 450 (462)
T 2ece_A 418 MVKLNANPSGG-LE-IDK--EFFVDFGEARSHQVRLS 450 (462)
T ss_dssp EEEEEECTTSC-EE-EEE--EEEEECTTSEEEEEEET
T ss_pred EEEEEecCCCC-ce-eCC--CEEeecccCcceeeecC
Confidence 7655 55556 44 332 12223322445555555
No 403
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.93 E-value=1.9e-09 Score=116.07 Aligned_cols=128 Identities=20% Similarity=0.147 Sum_probs=88.4
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC-eEEEEcCCCCC-CCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPI-IGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~~~~~~-~g~g~~ 571 (751)
+...+|.|.. . ..++|+||++|||||..++... .. .....|+++| ++|+.++|+-. .|++..
T Consensus 85 l~l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~~--------~~----~~~~~la~~~~~vvv~~nYRlg~~Gf~~~ 148 (498)
T 2ogt_A 85 LYLNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGSS--------PW----YDGTAFAKHGDVVVVTINYRMNVFGFLHL 148 (498)
T ss_dssp CEEEEEESCS--S--SCCEEEEEEECCSTTTSCCTTC--------GG----GCCHHHHHHHTCEEEEECCCCHHHHCCCC
T ss_pred cEEEEEecCC--C--CCCCcEEEEEcCCccCCCCCCC--------Cc----CCHHHHHhCCCEEEEeCCCcCchhhccCc
Confidence 5566778863 1 2358999999999875443211 10 1134567666 99999888622 244333
Q ss_pred CC-----CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004475 572 LP-----NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 637 (751)
Q Consensus 572 ~~-----~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d 637 (751)
.. ........+.|+..+++|++++. ..|+++|.|+|+|+||.+++.++... +..|+++|+.+|...
T Consensus 149 ~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 149 GDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred hhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 21 11223456889999999998862 36899999999999999998888753 457999999999754
No 404
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.90 E-value=1.2e-09 Score=118.99 Aligned_cols=128 Identities=17% Similarity=0.146 Sum_probs=86.2
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCC-CCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-IIGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~-~~g~g~~ 571 (751)
+...+|.|.... +.++|+||++|||||..++.... . .....|+. .|++|+.++|+- ..|++..
T Consensus 97 l~l~v~~P~~~~---~~~~Pviv~iHGGg~~~g~~~~~------~------~~~~~la~~~g~vvv~~nYRlg~~Gf~~~ 161 (543)
T 2ha2_A 97 LYLNVWTPYPRP---ASPTPVLIWIYGGGFYSGAASLD------V------YDGRFLAQVEGAVLVSMNYRVGTFGFLAL 161 (543)
T ss_dssp CEEEEEEESSCC---SSCEEEEEEECCSTTTCCCTTSG------G------GCTHHHHHHHCCEEEEECCCCHHHHHCCC
T ss_pred CeEEEeecCCCC---CCCCeEEEEECCCccccCCCCCC------c------CChHHHHhcCCEEEEEecccccccccccC
Confidence 455667786421 23589999999998755432110 0 11234554 799999988862 2233322
Q ss_pred C-CCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004475 572 L-PNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 636 (751)
Q Consensus 572 ~-~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~ 636 (751)
. .........+.|+..+++|++++. ..|+++|.|+|+|+||++++.++... +..|+++|+.+|..
T Consensus 162 ~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 162 PGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 1 111112345789999999998852 36899999999999999998887653 46799999999853
No 405
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.89 E-value=9.2e-09 Score=104.81 Aligned_cols=175 Identities=13% Similarity=0.118 Sum_probs=104.1
Q ss_pred HhCCeEEEEcCCCCCCCCCCC-----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---
Q 004475 551 LARRFAVLAGPSIPIIGEGDK-----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--- 622 (751)
Q Consensus 551 ~~~G~~v~~~~~~~~~g~g~~-----~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~--- 622 (751)
...+|.|+. .+.+|+|.+ ...........+++.+.++.+.. ..++.++|||+||.+|..+|.+.
T Consensus 114 L~~~~~v~~---~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~~l~G~S~GG~vA~~~A~~l~~~ 185 (319)
T 2hfk_A 114 FQEERDFLA---VPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPVVLLGHAGGALLAHELAFRLERA 185 (319)
T ss_dssp TTTTCCEEE---ECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEE---ecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHHh
Confidence 347899998 555666654 33333456666666666654431 25799999999999999999875
Q ss_pred -CCceeEEEEccCCCCCCCCcc-Ccc-------------cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCC
Q 004475 623 -PHLFCCGIARSGSYNKTLTPF-GFQ-------------TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 687 (751)
Q Consensus 623 -p~~~~~~v~~~~~~d~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp 687 (751)
++.+++++++++......... .+. ............|...........+++|+++++| .|..++
T Consensus 186 ~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~ 264 (319)
T 2hfk_A 186 HGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD 264 (319)
T ss_dssp HSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC
T ss_pred hCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC
Confidence 356899998887532110000 000 0000000000111110000123678899999999 999887
Q ss_pred CChHH-HHHHHHHHHhC-CCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475 688 LFPMQ-AERFFDALKGH-GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 741 (751)
Q Consensus 688 ~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 741 (751)
... .. .+... ...++++.++ ++|.....+....+.+.+.+||.+...
T Consensus 265 --~~~~~~----~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 265 --WQEERG----DWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp --CCGGGC----CCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred --cccccc----chhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 443 11 12221 2357889999 489854335778889999999987654
No 406
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.88 E-value=6.4e-07 Score=91.49 Aligned_cols=275 Identities=10% Similarity=-0.024 Sum_probs=149.6
Q ss_pred cceeEEeecCCCCCCCCccccc-----CCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eec
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVH-----GYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPL 77 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~-----~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~l 77 (751)
...|.++|..+ ++.++-. ..+-+....... .|+.+++.+. .....|.++|+++++. +.+
T Consensus 16 ~~~l~~~d~~t----~~~~~~i~~~~n~~~lg~~~~~i~--~~~~~lyv~~---------~~~~~v~viD~~t~~~~~~i 80 (328)
T 3dsm_A 16 NATLSYYDPAT----CEVENEVFYRANGFKLGDVAQSMV--IRDGIGWIVV---------NNSHVIFAIDINTFKEVGRI 80 (328)
T ss_dssp CBEEEEEETTT----TEEECSHHHHHHSSCCBSCEEEEE--EETTEEEEEE---------GGGTEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCC----CEEhhhhHhhhcCcccCccceEEE--EECCEEEEEE---------cCCCEEEEEECcccEEEEEc
Confidence 56788888887 7765421 001111122333 3666766654 3347899999998886 445
Q ss_pred cCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheee
Q 004475 78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (751)
Q Consensus 78 t~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (751)
.... ....++++||| .|+++... ..
T Consensus 81 ~~~~------~p~~i~~~~~g-~lyv~~~~------------------------------------------------~~ 105 (328)
T 3dsm_A 81 TGFT------SPRYIHFLSDE-KAYVTQIW------------------------------------------------DY 105 (328)
T ss_dssp ECCS------SEEEEEEEETT-EEEEEEBS------------------------------------------------CS
T ss_pred CCCC------CCcEEEEeCCC-eEEEEECC------------------------------------------------CC
Confidence 3221 24677899999 57665311 14
Q ss_pred EEEEEcC-CCCce-ecCCCc------eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCC
Q 004475 158 QLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (751)
Q Consensus 158 ~l~~~~~-~G~~~-~lt~~~------~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 229 (751)
.|+++|+ +++.. .+.-.. ....+++ ++++|++.... ....|.++|+++++.......
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~-----------~~~~v~viD~~t~~~~~~i~~-- 170 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS-----------YQNRILKIDTETDKVVDELTI-- 170 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT-----------TCCEEEEEETTTTEEEEEEEC--
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC-----------CCCEEEEEECCCCeEEEEEEc--
Confidence 7888888 56433 332222 3445566 67778776421 134689999987764432111
Q ss_pred CCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCce-EeEee-ceeEE-EEEe
Q 004475 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL-DLRFS-VSWC 306 (751)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~l~~~-~~~~~-~~~s 306 (751)
...+..+.++|||+ ++++...+...... ....+.|+++|.+ +.... .+.-. ..... ++++
T Consensus 171 -----------g~~p~~i~~~~dG~--l~v~~~~~~~~~~~-~~~~~~v~~id~~---t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 171 -----------GIQPTSLVMDKYNK--MWTITDGGYEGSPY-GYEAPSLYRIDAE---TFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp -----------SSCBCCCEECTTSE--EEEEBCCBCTTCSS-CBCCCEEEEEETT---TTEEEEEEECCTTCCCEEEEEC
T ss_pred -----------CCCccceEEcCCCC--EEEEECCCccCCcc-ccCCceEEEEECC---CCeEEEEEecCCCCCceeEEEe
Confidence 11234789999997 44433211100000 0012579999875 33322 22211 11344 8999
Q ss_pred cCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCC
Q 004475 307 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 386 (751)
Q Consensus 307 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~ 386 (751)
||++.|++... .|+++|+.++...............+ .++++|++..|+.....
T Consensus 234 ~d~~~lyv~~~------~v~~~d~~t~~~~~~~~~~~~~~~p~------gi~vdp~~g~lyva~~~-------------- 287 (328)
T 3dsm_A 234 GTRDTLYWINN------DIWRMPVEADRVPVRPFLEFRDTKYY------GLTVNPNNGEVYVADAI-------------- 287 (328)
T ss_dssp TTSCEEEEESS------SEEEEETTCSSCCSSCSBCCCSSCEE------EEEECTTTCCEEEEECT--------------
T ss_pred cCCCEEEEEcc------EEEEEECCCCceeeeeeecCCCCceE------EEEEcCCCCeEEEEccc--------------
Confidence 99998877541 79999998752111111111011111 17799977666665410
Q ss_pred CCCCCCCceeEEEecCCCceeEE
Q 004475 387 FTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 387 ~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
.......|.+||.+ |+....
T Consensus 288 --~y~~~~~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 288 --DYQQQGIVYRYSPQ-GKLIDE 307 (328)
T ss_dssp --TSSSEEEEEEECTT-CCEEEE
T ss_pred --ccccCCEEEEECCC-CCEEEE
Confidence 00123478889997 655433
No 407
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.87 E-value=4.8e-07 Score=92.47 Aligned_cols=228 Identities=7% Similarity=-0.124 Sum_probs=128.4
Q ss_pred eEEEEEcC-CCCc-eecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCC
Q 004475 157 AQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDI 233 (751)
Q Consensus 157 ~~l~~~~~-~G~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~ 233 (751)
..|.++|. +++. .++........++++||| +|+++... ...|+++|+++++... +.......
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~------------~~~v~~iD~~t~~~~~~i~~g~~~~-- 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW------------DYRIFIINPKTYEITGYIECPDMDM-- 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS------------CSEEEEEETTTTEEEEEEECTTCCT--
T ss_pred CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC------------CCeEEEEECCCCeEEEEEEcCCccc--
Confidence 47889999 6754 556444667788999999 67665422 3468999998876542 32111000
Q ss_pred CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCc-eEeEeeceeEE-EEEecCCce
Q 004475 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFS-VSWCDDSLA 311 (751)
Q Consensus 234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~~~~~-~~~spdg~~ 311 (751)
....+..+++ ++++ ++.+.. ...+.|.++|++ +... ..+.. ..... +.++|||+
T Consensus 129 ------~~~~p~~i~~--~~~~-lyv~~~----------~~~~~v~viD~~---t~~~~~~i~~-g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 129 ------ESGSTEQMVQ--YGKY-VYVNCW----------SYQNRILKIDTE---TDKVVDELTI-GIQPTSLVMDKYNK- 184 (328)
T ss_dssp ------TTCBCCCEEE--ETTE-EEEEEC----------TTCCEEEEEETT---TTEEEEEEEC-SSCBCCCEECTTSE-
T ss_pred ------cCCCcceEEE--ECCE-EEEEcC----------CCCCEEEEEECC---CCeEEEEEEc-CCCccceEEcCCCC-
Confidence 0012335666 5565 555431 013578889875 2222 22222 22234 78899998
Q ss_pred EEEeeeecc-------cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEcc
Q 004475 312 LVNETWYKT-------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 384 (751)
Q Consensus 312 l~~~~~~~~-------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~ 384 (751)
+++...... ....|+++|+.++ +........... ....++++|||+.|++..
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~-----~p~~la~~~d~~~lyv~~-------------- 243 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGD-----WPSEVQLNGTRDTLYWIN-------------- 243 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTC-----CCEEEEECTTSCEEEEES--------------
T ss_pred EEEEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCC-----CceeEEEecCCCEEEEEc--------------
Confidence 555543220 0258999999875 222222111000 011188999999887755
Q ss_pred CCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEe-cCCCCCeEEEEEcCCCce
Q 004475 385 RGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE-SKTEITQYHILSWPLKKS 463 (751)
Q Consensus 385 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~~l~~~~~~~g~~ 463 (751)
. .|+++|.++++......... . ...+..++++|+++.|+++.. .......|+++|++ |+.
T Consensus 244 -------~--~v~~~d~~t~~~~~~~~~~~--------~-~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 244 -------N--DIWRMPVEADRVPVRPFLEF--------R-DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp -------S--SEEEEETTCSSCCSSCSBCC--------C-SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred -------c--EEEEEECCCCceeeeeeecC--------C-CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 1 68899998887521100000 0 112234689997777777642 22345679999987 653
No 408
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.86 E-value=2.4e-09 Score=116.37 Aligned_cols=128 Identities=19% Similarity=0.194 Sum_probs=87.0
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCC-CCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPI-IGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~-~g~g~~ 571 (751)
+...+|.|.... .++|+||++|||||..++..... .....|++ .|++|+.++|+-. .|+...
T Consensus 93 l~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~~------------~~~~~la~~~~~vvv~~nYRlg~~Gf~~~ 156 (529)
T 1p0i_A 93 LYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSSLHV------------YDGKFLARVERVIVVSMNYRVGALGFLAL 156 (529)
T ss_dssp CEEEEEEESSCC----SSEEEEEEECCSTTTSCCTTCGG------------GCTHHHHHHHCCEEEEECCCCHHHHHCCC
T ss_pred CeEEEeeCCCCC----CCCeEEEEECCCccccCCCCccc------------cChHHHhccCCeEEEEecccccccccccC
Confidence 556677886531 35899999999987654321110 11234555 7999999888622 232221
Q ss_pred -CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004475 572 -LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 637 (751)
Q Consensus 572 -~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d 637 (751)
..........+.|+..+++|++++. ..|+++|.|+|+|+||.+++.++... +..|+++|+.+|...
T Consensus 157 ~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 157 PGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp TTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 0111112345788999999998852 36899999999999999999888764 457999999999753
No 409
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.86 E-value=8e-08 Score=98.64 Aligned_cols=93 Identities=12% Similarity=-0.083 Sum_probs=55.9
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC-Ccc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~-~~~ 84 (751)
.|+++|+.+ ++...-. +-+..- .+.+||||++++...........++....|.++|+.+++...-...+ ...
T Consensus 47 ~vsvID~~t----~~v~~~i--~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC----GVTLGHS--LGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT----TEEEEEE--EECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC----CeEEEEE--eCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 677888877 7766533 333333 79999999998776421000001123578999999998743322111 000
Q ss_pred c--cceeeeeEEecCCcEEEEee
Q 004475 85 L--NAVFGSFVWVNNSTLLIFTI 105 (751)
Q Consensus 85 ~--~~~~~~~~wspDg~~l~~~~ 105 (751)
+ -.....+++||||++|+...
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEc
Confidence 0 00124779999999999874
No 410
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.85 E-value=1.4e-09 Score=118.59 Aligned_cols=132 Identities=17% Similarity=0.110 Sum_probs=86.1
Q ss_pred eEEEEEEcC-----CCCCCCC-CCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC-
Q 004475 493 PLTATLYLP-----PGYDQSK-DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI- 565 (751)
Q Consensus 493 ~i~~~~~~P-----~~~~~~~-~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~- 565 (751)
-+...+|.| ......+ ..++|+||++|||||..++..... + ....|+++|++|+.++|+..
T Consensus 90 cL~lnv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~------~------~~~~l~~~g~vvv~~nYRl~~ 157 (551)
T 2fj0_A 90 CIHANIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDL------H------GPEYLVSKDVIVITFNYRLNV 157 (551)
T ss_dssp CCEEEEEEEGGGCCCC--------CEEEEEEECCSTTTSCCSCTTT------C------BCTTGGGGSCEEEEECCCCHH
T ss_pred CeEEEEEecCccccccccccCcCCCCCEEEEEcCCccccCCCcccc------c------CHHHHHhCCeEEEEeCCcCCc
Confidence 356777788 3211110 013899999999987654432110 0 12345678999999888632
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCC
Q 004475 566 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 636 (751)
Q Consensus 566 ~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~ 636 (751)
.|+.............+.|+..+++|++++. ..|+++|.|+|+|+||.+++.++.. .+..|+++|+.+|..
T Consensus 158 ~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 158 YGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 2322211111112345788999999998862 3689999999999999999988876 356899999999863
No 411
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.85 E-value=2.8e-09 Score=115.82 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=86.7
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCC-CCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPI-IGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~-~g~g~~ 571 (751)
+...+|.|... ..++|+||++|||||..++..... .....|+ ..|++|+.++|+-. .|+...
T Consensus 95 l~lnv~~P~~~----~~~~Pv~v~iHGG~~~~g~~~~~~------------~~~~~la~~~~~vvv~~nYRlg~~Gf~~~ 158 (537)
T 1ea5_A 95 LYLNIWVPSPR----PKSTTVMVWIYGGGFYSGSSTLDV------------YNGKYLAYTEEVVLVSLSYRVGAFGFLAL 158 (537)
T ss_dssp CEEEEEECSSC----CSSEEEEEEECCSTTTCCCTTCGG------------GCTHHHHHHHTCEEEECCCCCHHHHHCCC
T ss_pred CeEEEeccCCC----CCCCeEEEEECCCcccCCCCCCCc------------cChHHHHhcCCEEEEEeccCccccccccC
Confidence 55667788653 135899999999987654332110 1123455 78999999888622 232221
Q ss_pred -CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCCC
Q 004475 572 -LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 637 (751)
Q Consensus 572 -~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~d 637 (751)
..........+.|...+++|++++. ..|+++|.|+|+|+||.+++.++.. .+..|+++|+.+|...
T Consensus 159 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 159 HGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp TTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 0011112345789999999998862 3689999999999999999888765 2357999999998653
No 412
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.84 E-value=7.4e-07 Score=88.07 Aligned_cols=222 Identities=12% Similarity=0.032 Sum_probs=137.5
Q ss_pred eeEEeecCCCCCCCCcccccC---CCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475 6 GIGIHRLLPDDSLGPEKEVHG---YPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~---~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~ 81 (751)
.|+++++++ +..+.+.. +.. ......++|+|++++|+++. .....|++++++++..+.+....
T Consensus 11 ~I~~~~~~g----~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d---------~~~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 11 KIERLPLER----NTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD---------ISEPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEESS----SCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE---------TTTTEEEEEESSSCCCEEEECTT
T ss_pred eEEEEEecC----cccccccceeeecCCCCcEEEEEEecCCCEEEEEE---------CCCCEEEEEecCCCCcEEEEECC
Confidence 688899887 55443211 011 12356889999999998864 34578999999887655443221
Q ss_pred CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (751)
Q Consensus 82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (751)
.. ....++++|+++.|+++... ...|++
T Consensus 78 ~~----~p~~ia~d~~~~~lyv~d~~------------------------------------------------~~~I~~ 105 (267)
T 1npe_A 78 LG----SPEGIALDHLGRTIFWTDSQ------------------------------------------------LDRIEV 105 (267)
T ss_dssp CC----CEEEEEEETTTTEEEEEETT------------------------------------------------TTEEEE
T ss_pred CC----CccEEEEEecCCeEEEEECC------------------------------------------------CCEEEE
Confidence 10 24678999998889887321 147888
Q ss_pred EcCCCC-ceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475 162 GSLDGT-AKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (751)
Q Consensus 162 ~~~~G~-~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 238 (751)
++++|. .+.+.. . .....++++|++.+|+++.... ....|+++++++...+.+....
T Consensus 106 ~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~----------~~~~I~~~~~dg~~~~~~~~~~---------- 165 (267)
T 1npe_A 106 AKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR----------DNPKIETSHMDGTNRRILAQDN---------- 165 (267)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS----------SSCEEEEEETTSCCCEEEECTT----------
T ss_pred EEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC----------CCcEEEEEecCCCCcEEEEECC----------
Confidence 888773 333322 2 4567889999998998875321 1346888888876544432211
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeee
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWY 318 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~ 318 (751)
......++++||+++ |+++.. ..+.|++++.+ +.....+....... ...+.|+..|+++..
T Consensus 166 --~~~P~gia~d~~~~~-lyv~d~-----------~~~~I~~~~~~---g~~~~~~~~~~~~P-~gi~~d~~~lyva~~- 226 (267)
T 1npe_A 166 --LGLPNGLTFDAFSSQ-LCWVDA-----------GTHRAECLNPA---QPGRRKVLEGLQYP-FAVTSYGKNLYYTDW- 226 (267)
T ss_dssp --CSCEEEEEEETTTTE-EEEEET-----------TTTEEEEEETT---EEEEEEEEECCCSE-EEEEEETTEEEEEET-
T ss_pred --CCCCcEEEEcCCCCE-EEEEEC-----------CCCEEEEEecC---CCceEEEecCCCCc-eEEEEeCCEEEEEEC-
Confidence 112458999999998 777652 23578888885 33333332221111 234456777776542
Q ss_pred cccceeEEEecCCCC
Q 004475 319 KTSQTRTWLVCPGSK 333 (751)
Q Consensus 319 ~~~~~~l~~~~~~~~ 333 (751)
....|++++.+++
T Consensus 227 --~~~~v~~~d~~~g 239 (267)
T 1npe_A 227 --KTNSVIAMDLAIS 239 (267)
T ss_dssp --TTTEEEEEETTTT
T ss_pred --CCCeEEEEeCCCC
Confidence 2357999999875
No 413
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.83 E-value=2.3e-07 Score=95.15 Aligned_cols=126 Identities=5% Similarity=-0.088 Sum_probs=70.4
Q ss_pred ecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccc------cccCCCCCCCeeeCCCCCEEEEeeeecCCcceE
Q 004475 306 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE------NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 379 (751)
Q Consensus 306 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 379 (751)
+++++.++|.+. ..++.+|..+. ..+.+...... ..+.-.+...++++|||+.|++.....
T Consensus 219 ~~~~~~~~~vs~-----~~V~viD~~~~--~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~------ 285 (368)
T 1mda_H 219 ANYPGMLVWAVA-----SSILQGDIPAA--GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH------ 285 (368)
T ss_dssp ETTTTEEEECBS-----SCCEEEECCSS--CCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC------
T ss_pred cccCCEEEEEcC-----CEEEEEECCCC--cceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc------
Confidence 788888888774 47888888663 11221111000 000000111156999999988765200
Q ss_pred EEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 380 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 380 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
.+... .....+.++|+++++...-+.... .+..++++|||++++++.... ...+.++|+.
T Consensus 286 -----~~~~~-~~~~~~~ViD~~t~~vv~~i~vg~------------~p~gi~~s~Dg~~l~va~~~~--~~~VsVID~~ 345 (368)
T 1mda_H 286 -----SRSCL-AAAENTSSVTASVGQTSGPISNGH------------DSDAIIAAQDGASDNYANSAG--TEVLDIYDAA 345 (368)
T ss_dssp -----SSCTT-SCEEEEEEEESSSCCEEECCEEEE------------EECEEEECCSSSCEEEEEETT--TTEEEEEESS
T ss_pred -----cCccc-ccCCCEEEEECCCCeEEEEEECCC------------CcceEEECCCCCEEEEEccCC--CCeEEEEECC
Confidence 00000 001135588999887644333221 133468999999888876411 3579999999
Q ss_pred CCcee
Q 004475 460 LKKSS 464 (751)
Q Consensus 460 ~g~~~ 464 (751)
+++..
T Consensus 346 t~kvv 350 (368)
T 1mda_H 346 SDQDQ 350 (368)
T ss_dssp SCEEE
T ss_pred CCcEE
Confidence 88754
No 414
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.79 E-value=2.3e-08 Score=97.35 Aligned_cols=188 Identities=14% Similarity=-0.022 Sum_probs=102.8
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.|+++||.+. ....| .........+|.|+.++ .+|++. ..+++.+.++.
T Consensus 22 ~~~l~~~hg~~~-----------~~~~~-----~~~~~~l~~~~~v~~~d---~~g~~~----------~~~~~~~~i~~ 72 (244)
T 2cb9_A 22 GKNLFCFPPISG-----------FGIYF-----KDLALQLNHKAAVYGFH---FIEEDS----------RIEQYVSRITE 72 (244)
T ss_dssp SSEEEEECCTTC-----------CGGGG-----HHHHHHTTTTSEEEEEC---CCCSTT----------HHHHHHHHHHH
T ss_pred CCCEEEECCCCC-----------CHHHH-----HHHHHHhCCCceEEEEc---CCCHHH----------HHHHHHHHHHH
Confidence 478999999641 11111 11222234689999944 445421 23444444443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCCc-cCcccccc---cchh------hHHH
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLTP-FGFQTEFR---TLWE------ATNV 658 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~d~~~~~-~~~~~~~~---~~~~------~~~~ 658 (751)
+ . ...++.++||||||.+|..++.+. ++++.+++++++........ ........ .+.. ....
T Consensus 73 ~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (244)
T 2cb9_A 73 I---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRC 147 (244)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHH
T ss_pred h---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 1 125799999999999999999765 56788888887653211000 00000000 0000 0001
Q ss_pred HHhcCc-ccccCCCCCCEEEEEcC--CCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCCc-CCccccHHHHHHHHH
Q 004475 659 YIEMSP-ITHANKIKKPILIIHGE--VDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHV-YAARENVMHVIWETD 733 (751)
Q Consensus 659 ~~~~~~-~~~~~~~~~P~li~~G~--~D~~vp~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~~ 733 (751)
+..+.. ......+++|+++++|+ .|.. + .... ..+.. ....++++++++ +|. +...+....+...+.
T Consensus 148 ~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~--~~~~----~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~ 219 (244)
T 2cb9_A 148 YQEYWAQLINEGRIKSNIHFIEAGIQTETS-G--AMVL----QKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIIL 219 (244)
T ss_dssp HHHHHHHCCCCSCBSSEEEEEECSBCSCCC-H--HHHT----TSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCcCCCEEEEEccCccccc-c--ccch----hHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHH
Confidence 111110 12346788999999999 8873 3 3322 12222 123689999997 783 333455667788888
Q ss_pred HHHHHHhc
Q 004475 734 RWLQKYCL 741 (751)
Q Consensus 734 ~fl~~~l~ 741 (751)
+||.....
T Consensus 220 ~~L~~~~~ 227 (244)
T 2cb9_A 220 NILDKINS 227 (244)
T ss_dssp HHHHTC--
T ss_pred HHHhcCcc
Confidence 88876543
No 415
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.79 E-value=3.8e-08 Score=99.26 Aligned_cols=105 Identities=13% Similarity=0.028 Sum_probs=74.2
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccC--CCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFS--GMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 589 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 589 (751)
.|+||++||.+.. ...+. .........|.++||.|++ .+.+|+|.+........+..+++.+++
T Consensus 8 ~~~vVlvHG~~~~-----------~~~~~~~~~w~~l~~~L~~~G~~V~~---~d~~g~g~s~~~~~~~~~l~~~i~~~l 73 (320)
T 1ys1_X 8 RYPIILVHGLTGT-----------DKYAGVLEYWYGIQEDLQQRGATVYV---ANLSGFQSDDGPNGRGEQLLAYVKTVL 73 (320)
T ss_dssp SSCEEEECCTTCC-----------SEETTTEESSTTHHHHHHHTTCCEEE---CCCCSSCCSSSTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCC-----------ccccchHHHHHHHHHHHHhCCCEEEE---EcCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5789999996421 10000 1122456788889999999 556677766443444455566666555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
+.+ +..++.++||||||.++..++.++|++++++|++++..
T Consensus 74 ~~~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 74 AAT------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HHH------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred HHh------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 544 34689999999999999999999999999999999864
No 416
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.78 E-value=1.5e-08 Score=103.68 Aligned_cols=194 Identities=14% Similarity=0.058 Sum_probs=104.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.|+++||.+. ....|.. +... ...+|.|+. .+.+|+|.+...........+++.+.+..
T Consensus 101 ~~~l~~lhg~~~-----------~~~~~~~----l~~~-L~~~~~v~~---~d~~g~~~~~~~~~~~~~~a~~~~~~i~~ 161 (329)
T 3tej_A 101 GPTLFCFHPASG-----------FAWQFSV----LSRY-LDPQWSIIG---IQSPRPNGPMQTAANLDEVCEAHLATLLE 161 (329)
T ss_dssp SCEEEEECCTTS-----------CCGGGGG----GGGT-SCTTCEEEE---ECCCTTTSHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcc-----------cchHHHH----HHHh-cCCCCeEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 478999999641 1112211 1122 256899999 45556655322222234444444444433
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CCCceeEEEEccCCCCCCC----C-ccCccccc--------------
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCCGIARSGSYNKTL----T-PFGFQTEF-------------- 649 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~---~p~~~~~~v~~~~~~d~~~----~-~~~~~~~~-------------- 649 (751)
+ . ...++.++||||||.+|..+|.+ .|+++.+++++.+...... . ........
T Consensus 162 ~---~--~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (329)
T 3tej_A 162 Q---Q--PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA 236 (329)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHT
T ss_pred h---C--CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHh
Confidence 2 1 12579999999999999999998 8999999998887543100 0 00000000
Q ss_pred ------ccchhh-HHHHHhc-C--cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475 650 ------RTLWEA-TNVYIEM-S--PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 719 (751)
Q Consensus 650 ------~~~~~~-~~~~~~~-~--~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 719 (751)
...... ...+... . .......+.+|++++.|+.|..++ ..... .+...-..++++.+++ +|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~--~~~~~----~w~~~~~~~~~~~v~g-~H~~ 309 (329)
T 3tej_A 237 QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEG--MSPER----AWSPWIAELDIYRQDC-AHVD 309 (329)
T ss_dssp TCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTT--CCHHH----HHTTTEEEEEEEEESS-CGGG
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCC--CCchh----hHHHhcCCcEEEEecC-ChHH
Confidence 000000 0000000 0 001134567999999999998776 33322 2222224688899985 6764
Q ss_pred C-ccccHHHHHHHHHHHH
Q 004475 720 A-ARENVMHVIWETDRWL 736 (751)
Q Consensus 720 ~-~~~~~~~~~~~~~~fl 736 (751)
+ ..+........+.+||
T Consensus 310 ~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 310 IISPGTFEKIGPIIRATL 327 (329)
T ss_dssp GGSTTTHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHh
Confidence 3 3333455555666665
No 417
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.77 E-value=8.4e-09 Score=109.23 Aligned_cols=109 Identities=8% Similarity=-0.070 Sum_probs=77.5
Q ss_pred CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHH
Q 004475 511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEA 587 (751)
Q Consensus 511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~ 587 (751)
..|+||++||.+. . ....|.......|++ .||.|++ .+.+|+|.+... ........+|+.+
T Consensus 69 ~~p~vvliHG~~~-----------~--~~~~w~~~l~~~l~~~~~~~Vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~ 132 (452)
T 1bu8_A 69 DRKTRFIVHGFID-----------K--GEDGWLLDMCKKMFQVEKVNCIC---VDWRRGSRTEYTQASYNTRVVGAEIAF 132 (452)
T ss_dssp TSEEEEEECCSCC-----------T--TCTTHHHHHHHHHHTTCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCC-----------C--CCchHHHHHHHHHHhhCCCEEEE---EechhcccCchhHhHhhHHHHHHHHHH
Confidence 3689999999641 1 111121123455665 4999999 556677665421 1112355678888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
++++|.++..++.++|.|+||||||++|+.++.++|+++++++++.|.
T Consensus 133 li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1bu8_A 133 LVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (452)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCC
Confidence 999997654456689999999999999999999999999999998875
No 418
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.77 E-value=2.3e-06 Score=90.06 Aligned_cols=198 Identities=7% Similarity=-0.028 Sum_probs=120.6
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 112 (751)
....+|+|||+ |+++. .....|++++++++..+.+...... .. ++|+|+|+.|+......
T Consensus 133 P~~la~d~~g~-lyv~d---------~~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~~~---- 192 (409)
T 3hrp_A 133 MWGIAAVGNNT-VLAYQ---------RDDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGWEG---- 192 (409)
T ss_dssp EEEEEECSTTE-EEEEE---------TTTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBSST----
T ss_pred ceEEEEeCCCC-EEEEe---------cCCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEecCC----
Confidence 45778999997 54542 3457899999998887766543221 23 89999999888773310
Q ss_pred CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC-C-Cceec----C-CCceEEeeeeCCC
Q 004475 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G-TAKDF----G-TPAVYTAVEPSPD 185 (751)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-G-~~~~l----t-~~~~~~~~~~SpD 185 (751)
...|++++.. + ..+.+ . .......++++|+
T Consensus 193 -------------------------------------------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 193 -------------------------------------------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp -------------------------------------------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred -------------------------------------------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 0268888873 3 22333 2 2255668999997
Q ss_pred CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCc-eeeeecCCCceEEEEEecc
Q 004475 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQD 264 (751)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~spdG~~~i~~~~~~~ 264 (751)
+..|++. .. ...|++++.+++....+........ ....+. .++|+|++.. |+++..
T Consensus 230 ~g~lyv~-d~------------~~~I~~~d~~~~~~~~~~~~~~~g~-------~~~~P~~~ia~~p~~g~-lyv~d~-- 286 (409)
T 3hrp_A 230 EEWLYFV-DS------------NKNFGRFNVKTQEVTLIKQLELSGS-------LGTNPGPYLIYYFVDSN-FYMSDQ-- 286 (409)
T ss_dssp SSEEEEE-CT------------TCEEEEEETTTCCEEEEEECCCCSC-------CCCSSCCEEEEETTTTE-EEEEET--
T ss_pred CCeEEEE-EC------------CCcEEEEECCCCCEEEEecccccCC-------CCCCccccEEEeCCCCE-EEEEeC--
Confidence 7778874 22 3468999998776544422111100 011123 8999998776 666541
Q ss_pred CCCCccccCcccceeeccCCCCCCCCceEeEeec---------------eeEE-EEEecCCceEEEeeeecc-cceeEEE
Q 004475 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------LRFS-VSWCDDSLALVNETWYKT-SQTRTWL 327 (751)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~---------------~~~~-~~~spdg~~l~~~~~~~~-~~~~l~~ 327 (751)
....|++++.+ +. ...+.... .... ++++|||+ |+++. . ...+|.+
T Consensus 287 ---------~~~~I~~~~~~---g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad---~~~~~~I~~ 349 (409)
T 3hrp_A 287 ---------NLSSVYKITPD---GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD---GFKGYCLRK 349 (409)
T ss_dssp ---------TTTEEEEECTT---CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE---TTTTCEEEE
T ss_pred ---------CCCEEEEEecC---CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe---CCCCCEEEE
Confidence 23478888774 32 33332211 1134 88999998 55543 2 3468999
Q ss_pred ecCCCC
Q 004475 328 VCPGSK 333 (751)
Q Consensus 328 ~~~~~~ 333 (751)
+++.++
T Consensus 350 ~~~~~G 355 (409)
T 3hrp_A 350 LDILDG 355 (409)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 986553
No 419
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.75 E-value=3.4e-07 Score=96.30 Aligned_cols=83 Identities=10% Similarity=-0.112 Sum_probs=52.2
Q ss_pred cceeEEeecCCCCCCCCccc---ccCCCC-cccccceeecC--------CCCeEEEEEeecccccccCCceeEEEEEcCC
Q 004475 4 FTGIGIHRLLPDDSLGPEKE---VHGYPD-GAKINFVSWSP--------DGKRIAFSVRVDEEDNVSSCKLRVWIADAET 71 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~---l~~~~~-~~~~~~p~~SP--------DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~ 71 (751)
...|.+|++.+ ++... +..+.+ ...+...+||| ||+.||-.+ ....|.++|+.+
T Consensus 110 d~~v~lw~~~~----~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s----------~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 110 DNTVRLIITKN----ETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG----------DDCTLIIWRLTD 175 (393)
T ss_dssp TSCEEEEEEET----TEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE----------TTSEEEEEEEET
T ss_pred CCcEEEEECCC----CccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE----------CCCeEEEEECCC
Confidence 34688999987 65432 222332 23688999998 999999875 235666667655
Q ss_pred CCe-eeccCCCCccccceeeeeEEecCCcE-EEEee
Q 004475 72 GEA-KPLFESPDICLNAVFGSFVWVNNSTL-LIFTI 105 (751)
Q Consensus 72 g~~-~~lt~~~~~~~~~~~~~~~wspDg~~-l~~~~ 105 (751)
+.. ..+..... .+..++|+|++.. |+..+
T Consensus 176 ~~~~~~~~~~~~-----~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 176 EGPILAGYPLSS-----PGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp TEEEEEEEECSS-----CEEEEEEETTEEEEEEEEE
T ss_pred CceeeeecCCCC-----CcEEEEECCCCCceEEecC
Confidence 543 33322222 3678899999864 55443
No 420
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.75 E-value=1.4e-08 Score=110.37 Aligned_cols=130 Identities=19% Similarity=0.246 Sum_probs=84.8
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHH-HHH-hCCeEEEEcCCCCCC-CCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IFL-ARRFAVLAGPSIPII-GEGD 570 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~G~~v~~~~~~~~~-g~g~ 570 (751)
+...+|.|...... .++|+||++|||||..++. ..+.. ..+.. .++ ..|++|+.++|+... |+..
T Consensus 106 l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~~--~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~ 173 (544)
T 1thg_A 106 LYLNVFRPAGTKPD--AKLPVMVWIYGGAFVYGSS--------AAYPG--NSYVKESINMGQPVVFVSINYRTGPFGFLG 173 (544)
T ss_dssp CEEEEEEETTCCTT--CCEEEEEEECCCTTCCSGG--------GGCCS--HHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEeCCCCCCC--CCCcEEEEECCCccccCCc--------cccCc--hHHHHHHhhcCCCEEEEeCCCCCCcccCCC
Confidence 56677888754322 3589999999998765432 11111 11222 222 358999998886332 2111
Q ss_pred CCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEccCC
Q 004475 571 KLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS 635 (751)
Q Consensus 571 ~~~--~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~ 635 (751)
... ........+.|+..+++|++++. ..|+++|.|+|+|+||++++.+++.. +..|+++|+.+|.
T Consensus 174 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 174 GDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 000 00011245789999999998852 36899999999999999998887752 4579999999984
No 421
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.74 E-value=8.3e-09 Score=111.89 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=85.6
Q ss_pred eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHH-HH-HhCCeEEEEcCCCCCC-CCC
Q 004475 493 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IF-LARRFAVLAGPSIPII-GEG 569 (751)
Q Consensus 493 ~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~G~~v~~~~~~~~~-g~g 569 (751)
-+...+|.|...... .++|+||++|||||..++. ..+. ...+.. .+ ...|++|+.++|+-.. |+.
T Consensus 97 cl~l~v~~P~~~~~~--~~~Pv~v~iHGGg~~~g~~--------~~~~--~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~ 164 (534)
T 1llf_A 97 CLTINVVRPPGTKAG--ANLPVMLWIFGGGFEIGSP--------TIFP--PAQMVTKSVLMGKPIIHVAVNYRVASWGFL 164 (534)
T ss_dssp CCEEEEEECTTCCTT--CCEEEEEEECCSTTTSCCG--------GGSC--CHHHHHHHHHTTCCCEEEEECCCCHHHHHC
T ss_pred CeEEEEEECCCCCCC--CCceEEEEEeCCCcccCCC--------cccC--chHHHHHHHhcCCCEEEEEeCCCCCCCCCC
Confidence 367788889764322 3589999999998765432 1111 111111 22 2468999998886332 221
Q ss_pred CCCC--CchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEccCC
Q 004475 570 DKLP--NDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS 635 (751)
Q Consensus 570 ~~~~--~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~ 635 (751)
.... ........+.|+..+++|++++ -..|+++|.|+|+|+||++++.+++.. +..|+++|+.+|.
T Consensus 165 ~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 165 AGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp CSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 1100 0001234578999999999885 236899999999999999888777653 4579999999984
No 422
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.73 E-value=5.3e-06 Score=88.74 Aligned_cols=268 Identities=12% Similarity=0.040 Sum_probs=152.0
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 115 (751)
-.+++||++|+..+ ..+.|.++++.+++......+... .+..+.|+ ++.|+..+.+
T Consensus 123 ~~~~~~g~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~--~~~l~s~~~d-------- 178 (445)
T 2ovr_B 123 TCLQFCGNRIVSGS----------DDNTLKVWSAVTGKCLRTLVGHTG----GVWSSQMR--DNIIISGSTD-------- 178 (445)
T ss_dssp EEEEEETTEEEEEE----------TTSCEEEEETTTCCEEEECCCCSS----CEEEEEEE--TTEEEEEETT--------
T ss_pred EEEEEcCCEEEEEE----------CCCcEEEEECCCCcEEEEEcCCCC----CEEEEEec--CCEEEEEeCC--------
Confidence 36889999998853 346788889888875544332221 35677776 5566666432
Q ss_pred CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEE
Q 004475 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLIT 192 (751)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~ 192 (751)
..|.++++ +|+ ...+..+ ..+..+.|+ ++.|+..
T Consensus 179 -----------------------------------------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~ 215 (445)
T 2ovr_B 179 -----------------------------------------RTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSG 215 (445)
T ss_dssp -----------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEE
T ss_pred -----------------------------------------CeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEE
Confidence 46777888 663 3444444 667777774 5666665
Q ss_pred EecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccc
Q 004475 193 SMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (751)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~ 271 (751)
+. ...+.+||+.+++.. .+..+ ...+..+.| ||+. ++...
T Consensus 216 s~-------------dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~~~~--~~~~-l~~~~---------- 256 (445)
T 2ovr_B 216 SR-------------DATLRVWDIETGQCLHVLMGH-------------VAAVRCVQY--DGRR-VVSGA---------- 256 (445)
T ss_dssp ET-------------TSEEEEEESSSCCEEEEEECC-------------SSCEEEEEE--CSSC-EEEEE----------
T ss_pred eC-------------CCEEEEEECCCCcEEEEEcCC-------------cccEEEEEE--CCCE-EEEEc----------
Confidence 43 346889999866543 22211 122345566 7777 55543
Q ss_pred cCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccC
Q 004475 272 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 350 (751)
Q Consensus 272 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 350 (751)
..+.|.++++.. +.....+......+. +.| |++.|+.... ...|.+.++.++ ............
T Consensus 257 --~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~i~d~~~~--~~~~~~~~~~~~--- 321 (445)
T 2ovr_B 257 --YDFMVKVWDPET--ETCLHTLQGHTNRVYSLQF--DGIHVVSGSL----DTSIRVWDVETG--NCIHTLTGHQSL--- 321 (445)
T ss_dssp --TTSCEEEEEGGG--TEEEEEECCCSSCEEEEEE--CSSEEEEEET----TSCEEEEETTTC--CEEEEECCCCSC---
T ss_pred --CCCEEEEEECCC--CcEeEEecCCCCceEEEEE--CCCEEEEEeC----CCeEEEEECCCC--CEEEEEcCCccc---
Confidence 235788888741 222223333344455 666 8888776552 245777777664 222222111111
Q ss_pred CCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcc
Q 004475 351 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 430 (751)
Q Consensus 351 ~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 430 (751)
...++++++.|+..+.+ ..|.+||+.+++.......... ....+.
T Consensus 322 -----v~~~~~~~~~l~~~~~d---------------------g~i~vwd~~~~~~~~~~~~~~~-~~~~v~-------- 366 (445)
T 2ovr_B 322 -----TSGMELKDNILVSGNAD---------------------STVKIWDIKTGQCLQTLQGPNK-HQSAVT-------- 366 (445)
T ss_dssp -----EEEEEEETTEEEEEETT---------------------SCEEEEETTTCCEEEEECSTTS-CSSCEE--------
T ss_pred -----EEEEEEeCCEEEEEeCC---------------------CeEEEEECCCCcEEEEEccCCC-CCCCEE--------
Confidence 13466678877776622 3788999988876544432110 000111
Q ss_pred eeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 431 EDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 431 ~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
+++.+++.|+... . -+.+.++|+.+++..
T Consensus 367 -~~~~~~~~l~s~~-~---dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 367 -CLQFNKNFVITSS-D---DGTVKLWDLKTGEFI 395 (445)
T ss_dssp -EEEECSSEEEEEE-T---TSEEEEEETTTCCEE
T ss_pred -EEEECCCEEEEEe-C---CCeEEEEECCCCcee
Confidence 2333566555442 2 357999999887654
No 423
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.73 E-value=5.5e-07 Score=96.10 Aligned_cols=208 Identities=9% Similarity=-0.019 Sum_probs=113.1
Q ss_pred ccceeecC-----CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEE-e-cCCcEEEEee
Q 004475 33 INFVSWSP-----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-V-NNSTLLIFTI 105 (751)
Q Consensus 33 ~~~p~~SP-----DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pDg~~l~~~~ 105 (751)
..+|..|. ||++++. .. .....|.++|+++.+..+++..+... ....+++ + ||+++|+...
T Consensus 87 ~hh~~~s~t~g~~DG~~lfV-nd--------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFLFM-ND--------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp BCCEEEEEETTEEEEEEEEE-EE--------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCccccCCCCCCcCCCEEEE-Ec--------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 45699999 9987755 32 55688999999998866654433211 2456676 5 9999997774
Q ss_pred cCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhh--hheeeEEEEEcC-CCC-ceecCCCceEEeee
Q 004475 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFD--YYTTAQLVLGSL-DGT-AKDFGTPAVYTAVE 181 (751)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~-~G~-~~~lt~~~~~~~~~ 181 (751)
...... +.|+..+. ......+-++|. +.+ ..++.-++....++
T Consensus 155 ~~~~p~---------------------------------~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~ 201 (595)
T 1fwx_A 155 EDETPL---------------------------------VNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCD 201 (595)
T ss_dssp CSCEES---------------------------------SCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEE
T ss_pred cccccc---------------------------------CCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceE
Confidence 321100 00110000 002356778888 442 23333223445678
Q ss_pred eCCCCceEEEEEecCCccccc--ccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEE
Q 004475 182 PSPDQKYVLITSMHRPYSYKV--PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (751)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~--~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~ 259 (751)
.||||+++++++.+.+..... ........+.+.+... .....++|++ .+.
T Consensus 202 ~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~---------------------------~~~~v~~Gk~-~~i 253 (595)
T 1fwx_A 202 ADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE---------------------------IEKAIAAGDY-QEL 253 (595)
T ss_dssp ECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH---------------------------HHHHHHHTCS-EEE
T ss_pred ECCCCCEEEEEecCcccCcchhhccccccceEEEeeccc---------------------------eeEeccCCCe-eEE
Confidence 999999999987654311100 0001112334444221 1245677876 333
Q ss_pred EEeccCCCCccccCcccceeeccCCCCCCCC-ceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
+.+-++|.....+.. ...+........+.+||||++++.+. ....++.+++..+
T Consensus 254 ----------------~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~---~~s~~VsVid~~~ 308 (595)
T 1fwx_A 254 ----------------NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG---KLSPTVTVLDVTR 308 (595)
T ss_dssp ----------------TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC---TTSSBEEEEEGGG
T ss_pred ----------------CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC---CCCCeEEEEECcc
Confidence 247777764110112 22333322222278999999877654 2335677777764
No 424
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.72 E-value=1.5e-08 Score=107.22 Aligned_cols=108 Identities=7% Similarity=-0.037 Sum_probs=76.5
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-CeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 588 (751)
.|+||++||.+. . ....|.......|+++ ||.|++ .+.+|+|.+... ........+|+.++
T Consensus 70 ~p~vvliHG~~~-----------~--~~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRD-----------R--GEDSWPSDMCKKILQVETTNCIS---VDWSSGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTC-----------C--SSSSHHHHHHHHHHTTSCCEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCC-----------C--CCchHHHHHHHHHHhhCCCEEEE---EecccccccccHHHHHhHHHHHHHHHHH
Confidence 689999999531 1 1011221234556654 999999 556677665321 11223456788888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
+++|.++..++.+++.|+||||||++|+.++.++|+++++++++.|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccc
Confidence 89887653345679999999999999999999999999999998875
No 425
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=2.2e-06 Score=89.41 Aligned_cols=179 Identities=11% Similarity=0.087 Sum_probs=119.4
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|+.+++++++...+..... ....++|.+.++.|+++-..
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~-----~~~gl~~d~~~~~ly~~D~~--------------------------------- 136 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLE-----NAIALDFHHRRELVFWSDVT--------------------------------- 136 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCS-----CEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CccceeeccCCCcEEEEecCCC-----ccEEEEEecCCCeEEEEeCC---------------------------------
Confidence 3678999998877666654333 24678999988899987321
Q ss_pred ccCCccchhhhhhheeeEEEEEcCCC-CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (751)
...|++++++| ..+.+.. . .....+++.+.+..|+++... ...|++++++
T Consensus 137 ---------------~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~------------~~~I~~~~~d 189 (386)
T 3v65_B 137 ---------------LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 189 (386)
T ss_dssp ---------------TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT------------TTEEEECBTT
T ss_pred ---------------CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC------------CCeEEEEeCC
Confidence 14788999866 4444422 2 344578888888888887443 3468888888
Q ss_pred CceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee
Q 004475 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (751)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 297 (751)
+...+.+.... -..+++++++|++.. |+++... ....|++++.+ +...+.+...
T Consensus 190 g~~~~~l~~~~------------l~~P~giavdp~~g~-ly~td~~----------~~~~I~r~~~d---G~~~~~~~~~ 243 (386)
T 3v65_B 190 GAHRKVLLWQS------------LEKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSMD---GSGRRIIADT 243 (386)
T ss_dssp SCSCEEEECSS------------CSCEEEEEEETTTTE-EEEEECS----------SSCEEEEEETT---SCSCEEEECS
T ss_pred CCceEEeecCC------------CCCCcEEEEEcCCCe-EEEeccC----------CCCEEEEEeCC---CCCcEEEEEC
Confidence 76544442211 123468899999887 8886411 12579999986 5555555433
Q ss_pred cee-EE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 298 DLR-FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 298 ~~~-~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
... .. ++|+|+++.|+++. .....|+++++++.
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD---~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVD---AKHHVIERANLDGS 278 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEE---TTTTEEEEECTTSC
T ss_pred CCCCeeeEEEeCCCCEEEEEE---CCCCEEEEEeCCCC
Confidence 322 34 89999999888865 33468999999874
No 426
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=6.7e-06 Score=85.74 Aligned_cols=222 Identities=9% Similarity=0.025 Sum_probs=138.0
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
..|+.++++| +...+... .....++|.++++.|+++... ...|++++++++..+.+.....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~----- 158 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL----- 158 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSC-----
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCC-----
Confidence 4788899966 55555444 667889999999899887433 3478999999876554422111
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLAL 312 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l 312 (751)
....++++++.+.. ||++.. ....|++++++ +...+.+.... .... +++.|++..|
T Consensus 159 -------~~p~glavd~~~g~-lY~~d~-----------~~~~I~~~~~d---g~~~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 159 -------ESPGGLAVDWVHDK-LYWTDS-----------GTSRIEVANLD---GAHRKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp -------SCCCCEEEETTTTE-EEEEET-----------TTTEEEECBTT---SCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred -------CCccEEEEEeCCCe-EEEEcC-----------CCCeEEEEeCC---CCceEEeecCCCCCCcEEEEEcCCCeE
Confidence 12347899988887 888652 23478888886 55555554332 2334 7889999888
Q ss_pred EEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCC
Q 004475 313 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 392 (751)
Q Consensus 313 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (751)
+++.... ...|+++++++. ..+.+.......-. .++++|+++.|++... .
T Consensus 217 y~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~Pn------Glavd~~~~~lY~aD~--------------------~ 266 (386)
T 3v65_B 217 YWTDWGN--TPRIEASSMDGS--GRRIIADTHLFWPN------GLTIDYAGRRMYWVDA--------------------K 266 (386)
T ss_dssp EEEECSS--SCEEEEEETTSC--SCEEEECSSCSCEE------EEEEEGGGTEEEEEET--------------------T
T ss_pred EEeccCC--CCEEEEEeCCCC--CcEEEEECCCCCee------eEEEeCCCCEEEEEEC--------------------C
Confidence 8865322 368999999884 33444332222111 1889999988988772 3
Q ss_pred CceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475 393 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 463 (751)
Q Consensus 393 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~ 463 (751)
...|++++++++..+.+..... .++.+ +++ +++.|+++.+. ...|++++..+|+.
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~----~~P~g-------iav--~~~~ly~td~~---~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGL----PHPFA-------ITV--FEDSLYWTDWH---TKSINSANKFTGKN 321 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSC----SSEEE-------EEE--ETTEEEEEETT---TTEEEEEETTTCCS
T ss_pred CCEEEEEeCCCCeeEEEEECCC----CCceE-------EEE--ECCEEEEeeCC---CCeEEEEECCCCcc
Confidence 3478899987654444433221 01222 233 45567776532 45688888555543
No 427
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.70 E-value=8.8e-08 Score=92.37 Aligned_cols=182 Identities=10% Similarity=0.018 Sum_probs=97.7
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|.|+++||.+. ....| ..+...+ .. |.|+.++ .+|++. ..+++.+.++.
T Consensus 17 ~~~l~~~hg~~~-----------~~~~~----~~~~~~l-~~-~~v~~~d---~~g~~~----------~~~~~~~~i~~ 66 (230)
T 1jmk_C 17 EQIIFAFPPVLG-----------YGLMY----QNLSSRL-PS-YKLCAFD---FIEEED----------RLDRYADLIQK 66 (230)
T ss_dssp SEEEEEECCTTC-----------CGGGG----HHHHHHC-TT-EEEEEEC---CCCSTT----------HHHHHHHHHHH
T ss_pred CCCEEEECCCCC-----------chHHH----HHHHHhc-CC-CeEEEec---CCCHHH----------HHHHHHHHHHH
Confidence 478999999641 11111 1223333 34 9999844 445432 23444455544
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCCCCCCccC---ccc----------ccc---cc
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLTPFG---FQT----------EFR---TL 652 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~d~~~~~~~---~~~----------~~~---~~ 652 (751)
+. ...++.++|||+||.+|..++.+. ++.+++++++++........+. ... ... ..
T Consensus 67 ~~-----~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
T 1jmk_C 67 LQ-----PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSE 141 (230)
T ss_dssp HC-----CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSH
T ss_pred hC-----CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhH
Confidence 42 125799999999999999998765 3568888887764321100000 000 000 00
Q ss_pred hh--hH----HHHHhcCc-ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCC--cCCcc
Q 004475 653 WE--AT----NVYIEMSP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHH--VYAAR 722 (751)
Q Consensus 653 ~~--~~----~~~~~~~~-~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H--~~~~~ 722 (751)
.- .. ..+..+.. .....++++|+++++|++|..+| .. . ..+.. ....++++.+++ +| .+. .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~-~----~~w~~~~~~~~~~~~i~g-~H~~~~~-~ 212 (230)
T 1jmk_C 142 AVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--EW-L----ASWEEATTGAYRMKRGFG-THAEMLQ-G 212 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--TT-E----ECSGGGBSSCEEEEECSS-CGGGTTS-H
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc--cc-c----chHHHhcCCCeEEEEecC-ChHHHcC-c
Confidence 00 00 00111100 02346788999999999999875 22 1 11222 224588999997 78 443 3
Q ss_pred ccHHHHHHHHHHHHH
Q 004475 723 ENVMHVIWETDRWLQ 737 (751)
Q Consensus 723 ~~~~~~~~~~~~fl~ 737 (751)
+....+...+.+||.
T Consensus 213 ~~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 213 ETLDRNAGILLEFLN 227 (230)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHh
Confidence 444455555666653
No 428
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.70 E-value=1.8e-08 Score=110.62 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=77.6
Q ss_pred CCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCC-CCCCCCCC-------CCCchhHHH
Q 004475 510 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PIIGEGDK-------LPNDRFVEQ 580 (751)
Q Consensus 510 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~-~~~g~g~~-------~~~~~~~~~ 580 (751)
.++|+||++|||||..++.... .+ ....|+. .|++|+.++|+ +..|+... .........
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~------~~------~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~ 206 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLD------IY------NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 206 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCG------GG------CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCCEEEEECCCcccCCCCCCC------CC------CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcc
Confidence 3589999999998765432110 01 1234454 69999998886 22232211 000111233
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004475 581 LVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 636 (751)
Q Consensus 581 ~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~ 636 (751)
.+.|+..+++|+++.- ..|+++|.|+|+|+||+++..++... ...|+++|+.+|..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 5789999999999862 35899999999999999998887653 35799999999864
No 429
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.70 E-value=2e-06 Score=91.39 Aligned_cols=101 Identities=9% Similarity=0.091 Sum_probs=62.4
Q ss_pred ceEEeeeeCCC-CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCC
Q 004475 175 AVYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (751)
Q Consensus 175 ~~~~~~~~SpD-G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG 253 (751)
..+..++|+|+ ++.|+..+.+ ..+.+||+.++....... .....+..++|||||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~~------------~~~~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCATL------------PSTVAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEEE------------CGGGCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeecc------------CCCCceeEEEEcCCC
Confidence 67889999998 5666655433 368899998763321110 112346689999999
Q ss_pred CceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-------ceeEE-EEEecCCceEEEee
Q 004475 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-------DLRFS-VSWCDDSLALVNET 316 (751)
Q Consensus 254 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------~~~~~-~~~spdg~~l~~~~ 316 (751)
+. |+... ..+.|.+++.. +.....+... ...+. +.|++++..++...
T Consensus 205 ~~-lasgs------------~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 205 KQ-LAVGK------------QNGTVVQYLPT---LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp SC-EEEEE------------TTSCEEEECTT---CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred CE-EEEEc------------CCCcEEEEccC---CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 98 66544 23577888774 2222222211 12455 99999998876544
No 430
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.70 E-value=5.4e-06 Score=81.79 Aligned_cols=222 Identities=11% Similarity=-0.004 Sum_probs=121.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.....+++|||+ |+++.. .....|++++..++..+.+...... ....++++|||+ |++....
T Consensus 25 ~p~~i~~~~~g~-l~v~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~----~p~~i~~~~~g~-l~v~~~~---- 86 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE--------GMYGRVVKLATGSTGTTVLPFNGLY----QPQGLAVDGAGT-VYVTDFN---- 86 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC--------SSSCEEEEECC-----EECCCCSCC----SCCCEEECTTCC-EEEEETT----
T ss_pred CccceEECCCCC-EEEEcc--------CCCCcEEEecCCCcccceEeeCCcC----CcceeEECCCCC-EEEEcCC----
Confidence 355678999997 444132 3446888998766655544322111 245789999998 6555210
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC--ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~--~~~~~~~~SpDG~~ 188 (751)
..|++++.+| ....+... .....++++|||+
T Consensus 87 ---------------------------------------------~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~- 120 (270)
T 1rwi_B 87 ---------------------------------------------NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA- 120 (270)
T ss_dssp ---------------------------------------------TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-
T ss_pred ---------------------------------------------CEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-
Confidence 4688888866 33333322 4567899999997
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++.... ...|++++..+....... .. ....+..++++|||+ ++++..
T Consensus 121 l~v~~~~------------~~~i~~~~~~~~~~~~~~-~~-----------~~~~p~~i~~~~~g~--l~v~~~------ 168 (270)
T 1rwi_B 121 VYVADRG------------NNRVVKLAAGSKTQTVLP-FT-----------GLNDPDGVAVDNSGN--VYVTDT------ 168 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTCCSCEECC-CC-----------SCCSCCCEEECTTCC--EEEEEG------
T ss_pred EEEEECC------------CCEEEEEECCCceeEeec-cc-----------cCCCceeEEEeCCCC--EEEEEC------
Confidence 6555322 235778865543222110 00 012345789999996 555431
Q ss_pred ccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccc
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 346 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 346 (751)
..+.|++++.+ +.......... .... +.++++| .|+++.. ....|++++.++. ....+......
T Consensus 169 -----~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~---~~~~v~~~~~~~~--~~~~~~~~~~~ 234 (270)
T 1rwi_B 169 -----DNNRVVKLEAE---SNNQVVLPFTDITAPWGIAVDEAG-TVYVTEH---NTNQVVKLLAGST--TSTVLPFTGLN 234 (270)
T ss_dssp -----GGTEEEEECTT---TCCEEECCCSSCCSEEEEEECTTC-CEEEEET---TTSCEEEECTTCS--CCEECCCCSCS
T ss_pred -----CCCEEEEEecC---CCceEeecccCCCCceEEEECCCC-CEEEEEC---CCCcEEEEcCCCC--cceeeccCCCC
Confidence 12478888875 33222221111 2344 8899999 4555442 2357888988774 22222111111
Q ss_pred cccCCCCCCCeeeCCCCCEEEEee
Q 004475 347 NVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 347 ~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
... .+++++||+ |++..
T Consensus 235 ~p~------~i~~~~~g~-l~v~~ 251 (270)
T 1rwi_B 235 TPL------AVAVDSDRT-VYVAD 251 (270)
T ss_dssp CEE------EEEECTTCC-EEEEE
T ss_pred Cce------eEEECCCCC-EEEEE
Confidence 111 177899996 55554
No 431
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=1.3e-05 Score=82.38 Aligned_cols=221 Identities=9% Similarity=0.028 Sum_probs=135.9
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
..|+.++++| ....+... .....++|+++++.|+++... ...|++++++++..+.+....
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~------ 114 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTG------ 114 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSS------
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc------------CCceEEEecCCCCceEEEeCC------
Confidence 4688889977 44444444 667789999999999887433 346899999887655442211
Q ss_pred CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLAL 312 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l 312 (751)
.....++++.+.+.. ||++.. ....|++++++ +...+.+.... .... +++.|++..|
T Consensus 115 ------~~~p~glavd~~~g~-ly~~d~-----------~~~~I~~~~~d---G~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 115 ------LESPGGLAVDWVHDK-LYWTDS-----------GTSRIEVANLD---GAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp ------CSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred ------CCCccEEEEecCCCe-EEEEcC-----------CCCeEEEEcCC---CCceEEEEeCCCCCcceEEEecCcCeE
Confidence 012347899988887 888652 23578888886 55555554322 2334 7899988888
Q ss_pred EEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCC
Q 004475 313 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN 392 (751)
Q Consensus 313 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (751)
+++.... ...|+++++++. ..+.+....... ...++++|++..|++... .
T Consensus 174 y~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~------PnGla~d~~~~~lY~aD~--------------------~ 223 (349)
T 3v64_C 174 YWTDWGN--TPRIEASSMDGS--GRRIIADTHLFW------PNGLTIDYAGRRMYWVDA--------------------K 223 (349)
T ss_dssp EEEECSS--SCEEEEEETTSC--SCEESCCSSCSC------EEEEEEETTTTEEEEEET--------------------T
T ss_pred EEeccCC--CCEEEEEeCCCC--CcEEEEECCCCC------cceEEEeCCCCEEEEEEC--------------------C
Confidence 8876322 368999999884 334443322211 111889999999988772 2
Q ss_pred CceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCc
Q 004475 393 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 462 (751)
Q Consensus 393 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~ 462 (751)
...|++++++++..+.+..... ..+.+ +++ +++.|+++.+. ...|++++..+|+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~~----~~P~g-------iav--~~~~ly~td~~---~~~V~~~~~~~G~ 277 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVISQGL----PHPFA-------ITV--FEDSLYWTDWH---TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSC----SSEEE-------EEE--ETTEEEEEETT---TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCceEEEEeCCC----CCceE-------EEE--ECCEEEEecCC---CCeEEEEEccCCC
Confidence 3478999987654444433221 11222 233 34566666433 3467777754444
No 432
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.69 E-value=1.4e-08 Score=110.75 Aligned_cols=135 Identities=18% Similarity=0.151 Sum_probs=83.3
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCC-CCCCCCC
Q 004475 494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-IIGEGDK 571 (751)
Q Consensus 494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~-~~g~g~~ 571 (751)
+...+|.|..... ...++|+||++|||||..++..... +..........|+. .|++|+.++|+- ..|+...
T Consensus 81 l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~~------~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~ 153 (579)
T 2bce_A 81 LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGAN------FLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCccc------cccccccChHHHhcCCCEEEEEeCCccccccCCcC
Confidence 5666778865321 1235899999999987654332100 00000011234444 579999988862 2232211
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCC
Q 004475 572 LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGS 635 (751)
Q Consensus 572 ~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~ 635 (751)
..........+.|+..+++|++++. ..|+++|.|+|+|+||+++..++.. ....|+++|+.+|.
T Consensus 154 ~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 154 GDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1000011224678999999998752 3689999999999999999988765 34689999998874
No 433
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.68 E-value=4.9e-06 Score=85.49 Aligned_cols=179 Identities=11% Similarity=0.090 Sum_probs=118.9
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|+.+++++.+...+..... ....++|.+.++.|+++-..
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~-----~~~~l~~d~~~~~ly~~D~~--------------------------------- 93 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLE-----NAIALDFHHRRELVFWSDVT--------------------------------- 93 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCS-----CEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred ccceEEEeCCCCeeEEeecCCC-----ceEEEEEeccccEEEEEecc---------------------------------
Confidence 3678899988877666644332 24678999988899987321
Q ss_pred ccCCccchhhhhhheeeEEEEEcCCC-CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (751)
...|++++++| ..+.+.. . .....+++.+.+..|+++... ...|++++++
T Consensus 94 ---------------~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~d 146 (349)
T 3v64_C 94 ---------------LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 146 (349)
T ss_dssp ---------------TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETT
T ss_pred ---------------CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC------------CCeEEEEcCC
Confidence 14788899866 4444432 2 445678888888888887443 3468899998
Q ss_pred CceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee
Q 004475 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (751)
Q Consensus 218 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 297 (751)
+...+.+.... -..+++++++|++.. |+++... ....|++++++ +...+.+...
T Consensus 147 G~~~~~l~~~~------------l~~P~~iavdp~~g~-ly~td~~----------~~~~I~r~~~d---G~~~~~~~~~ 200 (349)
T 3v64_C 147 GAHRKVLLWQS------------LEKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSMD---GSGRRIIADT 200 (349)
T ss_dssp SCSCEEEECTT------------CSCEEEEEEETTTTE-EEEEECS----------SSCEEEEEETT---SCSCEESCCS
T ss_pred CCceEEEEeCC------------CCCcceEEEecCcCe-EEEeccC----------CCCEEEEEeCC---CCCcEEEEEC
Confidence 77554442211 123468899998887 8886521 12579999886 5555554332
Q ss_pred ce-eEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 298 DL-RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 298 ~~-~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
.. ... ++++|+++.|+++. .....|+.+++++.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD---~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVD---AKHHVIERANLDGS 235 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred CCCCcceEEEeCCCCEEEEEE---CCCCEEEEEeCCCC
Confidence 22 234 89999999998865 23458999999874
No 434
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.68 E-value=5e-06 Score=82.88 Aligned_cols=60 Identities=8% Similarity=0.048 Sum_probs=35.7
Q ss_pred eEEeeeeCC---CCceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeec
Q 004475 176 VYTAVEPSP---DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (751)
Q Consensus 176 ~~~~~~~Sp---DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp 251 (751)
.+..++||| ||+.|+-.+.+ ..|.+||+++++. +.+..+... ...+..++|||
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D-------------~TIkIWDl~TGk~l~tL~g~~~~----------v~~v~~vafSp 236 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIM-------------NNIVIWNLKTGQLLKKMHIDDSY----------QASVCHKAYSE 236 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETT-------------SEEEEEETTTCCEEEEEECCC-------------CCCEEEEEEE
T ss_pred ceeeEEeeccCCCCceEEEecCC-------------CcEEEEECCCCcEEEEEcCCCcc----------eeeeEEEEECC
Confidence 344567777 66777665443 4688999997753 444321110 01234568999
Q ss_pred CCCceEEE
Q 004475 252 DKPSTLYW 259 (751)
Q Consensus 252 dG~~~i~~ 259 (751)
||+. ++.
T Consensus 237 dG~~-lvs 243 (356)
T 2w18_A 237 MGLL-FIV 243 (356)
T ss_dssp TTEE-EEE
T ss_pred CCCE-EEE
Confidence 9987 443
No 435
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.68 E-value=1.3e-07 Score=93.59 Aligned_cols=103 Identities=8% Similarity=-0.114 Sum_probs=71.3
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.+.||++||.+. +. ...|...+...|.++||.|+. .+.+|+|... .....+++.+.++.
T Consensus 65 ~~pVVLvHG~~~-----------~~--~~~w~~~l~~~L~~~Gy~V~a---~DlpG~G~~~-----~~~~~~~la~~I~~ 123 (316)
T 3icv_A 65 SKPILLVPGTGT-----------TG--PQSFDSNWIPLSAQLGYTPCW---ISPPPFMLND-----TQVNTEYMVNAITT 123 (316)
T ss_dssp SSEEEEECCTTC-----------CH--HHHHTTTHHHHHHHTTCEEEE---ECCTTTTCSC-----HHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------Cc--HHHHHHHHHHHHHHCCCeEEE---ecCCCCCCCc-----HHHHHHHHHHHHHH
Confidence 467999999531 10 011111345677889999998 4455665431 23446677788888
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEccCCCC
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYN 637 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~d 637 (751)
+.+... .+++.|+||||||.++.+++..+ +++++.+|++++...
T Consensus 124 l~~~~g--~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 124 LYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHhC--CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 876532 36899999999999997777764 589999999998754
No 436
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.66 E-value=4.2e-08 Score=102.43 Aligned_cols=167 Identities=16% Similarity=0.197 Sum_probs=104.1
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe---EEEEcCCCCCCCCCCC-----C---C-------
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDK-----L---P------- 573 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~v~~~~~~~~~g~g~~-----~---~------- 573 (751)
.|.||++||.+. +...| ..+...|+++|| .|++ .+..|+|.+ . .
T Consensus 22 ~ppVVLlHG~g~-----------s~~~w----~~la~~La~~Gy~~~~Via---~DlpG~G~S~~~~~Dv~~~G~~~~~G 83 (484)
T 2zyr_A 22 FRPVVFVHGLAG-----------SAGQF----ESQGMRFAANGYPAEYVKT---FEYDTISWALVVETDMLFSGLGSEFG 83 (484)
T ss_dssp CCCEEEECCTTC-----------CGGGG----HHHHHHHHHTTCCGGGEEE---ECCCHHHHHHHTTTSTTTTTGGGHHH
T ss_pred CCEEEEECCCCC-----------CHHHH----HHHHHHHHHcCCCcceEEE---EECCCCCccccccccccccccccccc
Confidence 578999999641 11111 245667888999 6888 445565532 0 0
Q ss_pred -------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEE
Q 004475 574 -------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIA 631 (751)
Q Consensus 574 -------------------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~ 631 (751)
.........+++.+.++.+.++. +..++.++||||||.+++.++.++| ++++++|+
T Consensus 84 ~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVl 161 (484)
T 2zyr_A 84 LNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLIL 161 (484)
T ss_dssp HHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEE
T ss_pred cccccccccccccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEE
Confidence 00122344667777777776653 2368999999999999999999987 48999999
Q ss_pred ccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCC--CCCChHHHHHHHHHHHhCCCcEEE
Q 004475 632 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDK--VGLFPMQAERFFDALKGHGALSRL 709 (751)
Q Consensus 632 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~--vp~~~~~~~~~~~~l~~~~~~~~~ 709 (751)
+++..+.. . ....++|.+.|..|.. ++.+.. .+. ...+.
T Consensus 162 Iapp~~~d----------------------------~-p~g~~~L~ilG~~d~~p~V~~pss-------~L~---~ga~~ 202 (484)
T 2zyr_A 162 LDGVWGVD----------------------------A-PEGIPTLAVFGNPKALPALGLPEE-------KVV---YNATN 202 (484)
T ss_dssp ESCCCSEE----------------------------C-CTTSCEEEEEECGGGSCCSSCCSS-------CCE---ETSEE
T ss_pred ECCccccc----------------------------c-CcCCHHHHHhCCCCcCCcccChhH-------hcC---CCceE
Confidence 99875410 0 0235677777765531 110011 111 02356
Q ss_pred EEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475 710 VLLPFEHHVYAARENVMHVIWETDRWLQKY 739 (751)
Q Consensus 710 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 739 (751)
+++++++|..... ..+.+..+++||...
T Consensus 203 v~i~~a~H~~ll~--dp~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 203 VYFNNMTHVQLCT--SPETFAVMFEFINGY 230 (484)
T ss_dssp EEETTCCHHHHHH--CHHHHHHHHHHHHSS
T ss_pred EEECCCCcccccc--CHHHHHHHHHHhccc
Confidence 6789999986522 235666789999853
No 437
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.64 E-value=1.7e-07 Score=98.25 Aligned_cols=86 Identities=19% Similarity=0.190 Sum_probs=66.9
Q ss_pred HHHh-CCeEEEEcCCCCCCCCCCCCCCch------------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHHH
Q 004475 549 IFLA-RRFAVLAGPSIPIIGEGDKLPNDR------------FVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFM 614 (751)
Q Consensus 549 ~~~~-~G~~v~~~~~~~~~g~g~~~~~~~------------~~~~~~~d~~~~v~~l~~~~-~id~~~i~l~G~S~GG~~ 614 (751)
.+++ .|+.|++ .+.+|+|.+..... ..++.++|+...+++++... .....+++++||||||.+
T Consensus 63 ~lA~~~~~~Vi~---~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~l 139 (446)
T 3n2z_B 63 DVAEELKAMLVF---AEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGML 139 (446)
T ss_dssp HHHHHHTEEEEE---ECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHH
T ss_pred HHHHHhCCcEEE---EecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHH
Confidence 4444 4889999 67778888743211 25678999999999998752 223468999999999999
Q ss_pred HHHHHHhCCCceeEEEEccCCCC
Q 004475 615 TAHLLAHAPHLFCCGIARSGSYN 637 (751)
Q Consensus 615 a~~~a~~~p~~~~~~v~~~~~~d 637 (751)
|++++.++|+.+.++|+.++++.
T Consensus 140 A~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 140 AAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHhhhccccEEEEeccchh
Confidence 99999999999999998876543
No 438
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.64 E-value=1e-05 Score=81.86 Aligned_cols=179 Identities=12% Similarity=-0.024 Sum_probs=115.4
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|.++++++++...+..... ....++|+++++.|+++...
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~-----~p~g~~~d~~~~~ly~~D~~--------------------------------- 50 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS--------------------------------- 50 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCeEEEEECCCcceEehhcCCC-----ceEEEEEEeCCCEEEEEECC---------------------------------
Confidence 3679999999887665543222 24678999998899988321
Q ss_pred ccCCccchhhhhhheeeEEEEEcCCC-----CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-----~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
...|++++++| ..+.+.. . .....+++.+.++.|+++... ...|.+
T Consensus 51 ---------------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~------------~~~I~~ 103 (316)
T 1ijq_A 51 ---------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 103 (316)
T ss_dssp ---------------TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred ---------------CCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC------------CCEEEE
Confidence 14788888754 2233322 2 344678888888888887433 346888
Q ss_pred EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (751)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (751)
+++++...+.+.... ...+++++.+|++.+ |+++... ....|++++.+ +...+.
T Consensus 104 ~~~~g~~~~~~~~~~------------~~~P~~iavdp~~g~-ly~~d~~----------~~~~I~~~~~d---G~~~~~ 157 (316)
T 1ijq_A 104 ADTKGVKRKTLFREN------------GSKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGLN---GVDIYS 157 (316)
T ss_dssp EETTSSSEEEEEECT------------TCCEEEEEEETTTTE-EEEEECS----------SSCEEEEEETT---SCCEEE
T ss_pred EeCCCCceEEEEECC------------CCCcceEEeCCCCCE-EEEEccC----------CCCeEEEEcCC---CCCeEE
Confidence 999877555443211 123458899998887 7886411 12579998886 545544
Q ss_pred eEeece-eEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 294 LHKLDL-RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 294 l~~~~~-~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
+..... ... ++|+++++.|+++. .....|+.+++++.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D---~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 196 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred EEECCCCCceEEEEeccCCEEEEEE---CCCCeEEEEecCCC
Confidence 433222 233 89999999998865 23458999999873
No 439
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.63 E-value=1e-05 Score=84.73 Aligned_cols=185 Identities=12% Similarity=-0.017 Sum_probs=121.1
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|+.+++++++...+..... ....++|++.++.|+++...
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~-----~~~~l~~d~~~~~lywsD~~--------------------------------- 132 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS--------------------------------- 132 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCS-----CEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred cceeEEEccCCcceeEeccccC-----cceEEeeeeccCceEEEecC---------------------------------
Confidence 3789999998887666644332 25688999988899988321
Q ss_pred ccCCccchhhhhhheeeEEEEEcCCC-----CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-----~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
...|++++++| ..+.+.. . .....+++.+.++.|+++... ...|++
T Consensus 133 ---------------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~ 185 (400)
T 3p5b_L 133 ---------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 185 (400)
T ss_dssp ---------------TTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred ---------------CCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEE
Confidence 14677787755 2333332 2 456678888878888887433 346889
Q ss_pred EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (751)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (751)
++++++..+.+.... ...+++++..|.+.+ |+++.. .....|++++++ +...+.
T Consensus 186 ~~~~g~~~~~l~~~~------------~~~P~~iavdp~~g~-ly~td~----------~~~~~I~~~~~d---G~~~~~ 239 (400)
T 3p5b_L 186 ADTKGVKRKTLFREN------------GSKPRAIVVDPVHGF-MYWTDW----------GTPAKIKKGGLN---GVDIYS 239 (400)
T ss_dssp ECTTTCSEEEEEECS------------SCCEEEEEEETTTTE-EEEEEC----------SSSCCEEEEETT---SCSCEE
T ss_pred EeCCCCceEEEEeCC------------CCCcceEEEecccCe-EEEEeC----------CCCCEEEEEeCC---CCccEE
Confidence 999887655543211 123568899998887 888641 112579999886 555555
Q ss_pred eEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 294 LHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 294 l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
+.... ..-. ++++++++.|+++- .....|+.+++++. ..+.+.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d~dG~--~~~~~~ 284 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG--NRKTIL 284 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--CCEEEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEeCCCC--ccEEEE
Confidence 54433 2234 89999999988865 23468999999884 344444
No 440
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.62 E-value=1.5e-07 Score=93.67 Aligned_cols=103 Identities=14% Similarity=-0.015 Sum_probs=68.9
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 591 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 591 (751)
.|+||++||.+.... .. ... ........|.++||.|++ .+.+|+|.+. ....+..+++.++++.
T Consensus 7 ~~~vvlvHG~~~~~~-----~~----~~~-~~~~~~~~L~~~G~~v~~---~d~~g~g~s~---~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDN-----IL----GVD-YWFGIPSALRRDGAQVYV---TEVSQLDTSE---VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSE-----ET----TEE-SSTTHHHHHHHTTCCEEE---ECCCSSSCHH---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCcc-----cc----ccc-cHHHHHHHHHhCCCEEEE---EeCCCCCCch---hhHHHHHHHHHHHHHH
Confidence 578999999631100 00 001 112456678889999999 4555665531 1233444444444443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475 592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 636 (751)
Q Consensus 592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 636 (751)
+ +..++.++||||||.++..++.++|++++++|++++..
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 34689999999999999999999999999999999853
No 441
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.59 E-value=3.3e-05 Score=78.09 Aligned_cols=224 Identities=8% Similarity=0.021 Sum_probs=133.4
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC----ceeeeeccCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~~ 230 (751)
..|..+++++ +...+... .....++|+++++.|+++... ...|+++++++ ...+.+...
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~--- 74 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISR--- 74 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECS---
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeC---
Confidence 4688889855 44444333 667789999999999887443 34788999886 222322110
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE-EEEecC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS-VSWCDD 308 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~-~~~spd 308 (751)
.-..+.++++++.+.. ||++.. ....|.+++++ +...+.+... ..... ++..|+
T Consensus 75 ---------~~~~p~glavd~~~~~-ly~~d~-----------~~~~I~~~~~~---g~~~~~~~~~~~~~P~~iavdp~ 130 (316)
T 1ijq_A 75 ---------DIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADTK---GVKRKTLFRENGSKPRAIVVDPV 130 (316)
T ss_dssp ---------SCSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SSSEEEEEECTTCCEEEEEEETT
T ss_pred ---------CCCCcCEEEEeecCCe-EEEEEC-----------CCCEEEEEeCC---CCceEEEEECCCCCcceEEeCCC
Confidence 0112347899888777 788652 23578888875 5455555442 23344 788998
Q ss_pred CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 388 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~ 388 (751)
+..|+++... ....|+++++++. ..+.+....... ...++++++++.|++...
T Consensus 131 ~g~ly~~d~~--~~~~I~~~~~dG~--~~~~~~~~~~~~------P~gla~d~~~~~lY~~D~----------------- 183 (316)
T 1ijq_A 131 HGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQW------PNGITLDLLSGRLYWVDS----------------- 183 (316)
T ss_dssp TTEEEEEECS--SSCEEEEEETTSC--CEEEEECSSCSC------EEEEEEETTTTEEEEEET-----------------
T ss_pred CCEEEEEccC--CCCeEEEEcCCCC--CeEEEEECCCCC------ceEEEEeccCCEEEEEEC-----------------
Confidence 8888876532 1258999999874 333343222211 111789999999988772
Q ss_pred CCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475 389 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 463 (751)
Q Consensus 389 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~ 463 (751)
....|.++|+++...+.+..... .+..+.+ +++ +++.|+++... ...|++++..+|+.
T Consensus 184 ---~~~~I~~~d~dg~~~~~~~~~~~--~~~~P~g-------iav--~~~~ly~~d~~---~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 184 ---KLHSISSIDVNGGNRKTILEDEK--RLAHPFS-------LAV--FEDKVFWTDII---NEAIFSANRLTGSD 241 (316)
T ss_dssp ---TTTEEEEEETTSCSCEEEEECTT--TTSSEEE-------EEE--ETTEEEEEETT---TTEEEEEETTTCCC
T ss_pred ---CCCeEEEEecCCCceEEEeecCC--ccCCcEE-------EEE--ECCEEEEEECC---CCeEEEEeCCCCcc
Confidence 23478999998655444433211 1111222 233 45677776532 45788888766553
No 442
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.58 E-value=4.7e-08 Score=107.02 Aligned_cols=128 Identities=21% Similarity=0.192 Sum_probs=82.9
Q ss_pred EEEEEEcCCCCCC-CCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhC-CeEEEEcCCCCCC-CCCC
Q 004475 494 LTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPII-GEGD 570 (751)
Q Consensus 494 i~~~~~~P~~~~~-~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~-g~g~ 570 (751)
+...+|.|..... ....++|+||++|||||..++. ..+.. ..|+++ |++|+.++|+-.. |+..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~--------~~~~~------~~la~~~~~vvv~~~YRl~~~Gfl~ 177 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTG--------NLYDG------SVLASYGNVIVITVNYRLGVLGFLS 177 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCG--------GGSCC------HHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCC--------CccCc------hhhhccCCEEEEEeCCcCcccccCc
Confidence 5677888865321 1123589999999998765432 11111 235554 7999998886322 2211
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEccCC
Q 004475 571 KLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 635 (751)
Q Consensus 571 ~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~ 635 (751)
...........+.|+..+++|++++. ..|+++|.|+|+|+||.++..++.... ..|.++|+.+|.
T Consensus 178 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 178 TGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 11111111345789999999998852 368999999999999999998887543 468999998864
No 443
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.58 E-value=3.1e-05 Score=78.94 Aligned_cols=236 Identities=7% Similarity=-0.033 Sum_probs=123.6
Q ss_pred eEEEEEcC-CCCceecCC-C--ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc--eeeeeccCCCC
Q 004475 157 AQLVLGSL-DGTAKDFGT-P--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~-~G~~~~lt~-~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~ 230 (751)
..|+++|. +|+...... . .....++++|||+ |+++... ...|++|+.++. ....+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~------------~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVA------------LHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETT------------TTEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECC------------CCEEEEEeCCCCeEEEEEecccCCC
Confidence 57999999 686543322 2 4567899999999 6665332 346889998876 33333211000
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-------e---e
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-------L---R 300 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-------~---~ 300 (751)
+. -...-..+..++++|++.. |+++.. .....|++++.+ +.....+.... . .
T Consensus 136 -g~---~~~~~~~P~~ia~~~~~g~-lyv~d~----------~~~~~I~~~~~~---g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 136 -GS---DQNHFCQPTDVAVEPSTGA-VFVSDG----------YCNSRIVQFSPS---GKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp -CC---STTCCSSEEEEEECTTTCC-EEEEEC----------SSCCEEEEECTT---SCEEEEECEECCSSSCCTTEESC
T ss_pred -CC---CccccCCCcEEEEeCCCCe-EEEEeC----------CCCCeEEEEcCC---CCEEEEeccCCCCCCCCCcccCC
Confidence 00 0011123568999994444 666541 012467777754 43333332111 1 1
Q ss_pred EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-cccccCCCCCCCeeeCCCCCEEEEeeeecCCcce
Q 004475 301 FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 378 (751)
Q Consensus 301 ~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 378 (751)
.. ++++|++..|+++. ....+|.+++.+++ .-...+.... ....+. ++++| |. + +... +.
T Consensus 198 p~gia~d~~~g~l~v~d---~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~------~~~~p-g~-~-~~~~-----g~ 259 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVAD---RENGRIQCFKTDTK-EFVREIKHASFGRNVFA------ISYIP-GF-L-FAVN-----GK 259 (329)
T ss_dssp EEEEEEETTTTEEEEEE---TTTTEEEEEETTTC-CEEEEECCTTTTTCEEE------EEEET-TE-E-EEEE-----CC
T ss_pred CcEEEEECCCCEEEEEE---CCCCEEEEEECCCC-cEEEEEeccccCCCcce------eeecC-CE-E-EEeC-----CC
Confidence 34 88999966666544 23457888888753 1112221111 111111 56777 42 2 2221 11
Q ss_pred EEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475 379 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 458 (751)
Q Consensus 379 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~ 458 (751)
..-.+.....+++|+..+|+....+..... . ...+..++++||| .|+++... ...|+++++
T Consensus 260 -------~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-~-------~~~p~~ia~~~dG-~lyvad~~---~~~I~~~~~ 320 (329)
T 3fvz_A 260 -------PYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-H-------FDMPHDIVASEDG-TVYIGDAH---TNTVWKFTL 320 (329)
T ss_dssp -------CCTTCSCCCCEEEEETTTCCEEEEECCSSS-C-------CSSEEEEEECTTS-EEEEEESS---SCCEEEEEE
T ss_pred -------EEeccCCCcEEEEEEcCCCeEEEEEcCCCC-c-------cCCeeEEEECCCC-CEEEEECC---CCEEEEEeC
Confidence 011122345789999988887665532111 1 1123346899999 56655433 336887776
Q ss_pred CC
Q 004475 459 PL 460 (751)
Q Consensus 459 ~~ 460 (751)
+.
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 444
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.58 E-value=5.8e-05 Score=75.40 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=108.7
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
......++|||+ |.+.. .....|++++.+ ++.+.+...... ..+..++++|||+ |++....
T Consensus 16 ~~~~i~~d~~g~-l~v~~---------~~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~-l~v~~~~---- 76 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWITQ---------HKANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGE-VWFTENA---- 76 (299)
T ss_dssp CEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSC-EEEEETT----
T ss_pred CccceEECCCCC-EEEEe---------cCCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCC-EEEeCCC----
Confidence 467888999997 33321 334689999987 665554321111 1356788999997 4444210
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCceecCC--C-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~~lt~--~-~~~~~~~~SpDG~~ 188 (751)
...|++++.+|+.+.+.. . .....++++|||+
T Consensus 77 --------------------------------------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~- 111 (299)
T 2z2n_A 77 --------------------------------------------ANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD- 111 (299)
T ss_dssp --------------------------------------------TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC-
T ss_pred --------------------------------------------CCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC-
Confidence 036788887765444431 2 4567889999996
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++.... ...+++++.++ +...+.. +. ....+..++++|||+ ++++..
T Consensus 112 l~v~~~~------------~~~i~~~d~~g-~~~~~~~-~~----------~~~~~~~i~~~~~g~--l~v~~~------ 159 (299)
T 2z2n_A 112 IWFTEMN------------GNRIGRITDDG-KIREYEL-PN----------KGSYPSFITLGSDNA--LWFTEN------ 159 (299)
T ss_dssp EEEEETT------------TTEEEEECTTC-CEEEEEC-SS----------TTCCEEEEEECTTSC--EEEEET------
T ss_pred EEEEecC------------CceEEEECCCC-CEEEecC-CC----------CCCCCceEEEcCCCC--EEEEeC------
Confidence 5554322 23588888843 3333211 10 112345789999985 555431
Q ss_pred ccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecC
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCP 330 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~ 330 (751)
..+.|++++.+ + ....+. ....... +.++++|+ |+++.. ....|++++.
T Consensus 160 -----~~~~i~~~~~~---g-~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~~~ 211 (299)
T 2z2n_A 160 -----QNNAIGRITES---G-DITEFKIPTPASGPVGITKGNDDA-LWFVEI---IGNKIGRITT 211 (299)
T ss_dssp -----TTTEEEEECTT---C-CEEEEECSSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECT
T ss_pred -----CCCEEEEEcCC---C-cEEEeeCCCCCCcceeEEECCCCC-EEEEcc---CCceEEEECC
Confidence 12467877762 2 222221 1122344 78899988 444331 2347888988
No 445
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.57 E-value=1.5e-07 Score=95.25 Aligned_cols=88 Identities=13% Similarity=0.086 Sum_probs=63.2
Q ss_pred hHHHHHHhCCeE---EEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 004475 545 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 619 (751)
Q Consensus 545 ~~~~~~~~~G~~---v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a 619 (751)
.+...|.++||. |+++ ++.|+|.+... ........+++.+.++.+.+.. ..++|.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~~---D~~g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFGV---TYLSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEEE---CCSCHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEE---eCCCCCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 456778889998 8884 44455443211 1112345677777777776653 236899999999999999999
Q ss_pred HhC--CCceeEEEEccCCCC
Q 004475 620 AHA--PHLFCCGIARSGSYN 637 (751)
Q Consensus 620 ~~~--p~~~~~~v~~~~~~d 637 (751)
.++ |++++++|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 988 899999999987643
No 446
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.56 E-value=9.2e-08 Score=100.56 Aligned_cols=108 Identities=9% Similarity=-0.067 Sum_probs=74.0
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH-HhCCeEEEEcCCCCCCCCCCCCCCc--hhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~ 588 (751)
.|+||++||.+. +....|.......| ...+|.|++ .|.+|+|.+.... .......+++.++
T Consensus 69 ~p~vvliHG~~~-------------s~~~~w~~~l~~~ll~~~~~~VI~---vD~~g~g~s~y~~~~~~~~~v~~~la~l 132 (449)
T 1hpl_A 69 RKTRFIIHGFID-------------KGEESWLSTMCQNMFKVESVNCIC---VDWKSGSRTAYSQASQNVRIVGAEVAYL 132 (449)
T ss_dssp SEEEEEECCCCC-------------TTCTTHHHHHHHHHHHHCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCC-------------CCCccHHHHHHHHHHhcCCeEEEE---EeCCcccCCccHHHHHHHHHHHHHHHHH
Confidence 689999999531 11111221233344 357999999 5556666543111 1123445778888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
+++|.+...++.+++.|+||||||++|+.++.++|++++.++++.|.
T Consensus 133 l~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 133 VGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 88886543356689999999999999999999999999999988775
No 447
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.56 E-value=3.7e-05 Score=77.57 Aligned_cols=234 Identities=10% Similarity=0.080 Sum_probs=123.6
Q ss_pred eEEEEEcC-CCCceecCC-----C-ceEEeeeeCCC-CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee-ccC
Q 004475 157 AQLVLGSL-DGTAKDFGT-----P-AVYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDL 227 (751)
Q Consensus 157 ~~l~~~~~-~G~~~~lt~-----~-~~~~~~~~SpD-G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~ 227 (751)
..|++++. +|+.+.+.. . ..+..+++++| |+ |++.... ..|++++.+ ++.+.+ ...
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~-------------~~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMR-------------LGLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETT-------------TEEEEEETT-SCEEECCSBC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECC-------------CCEEEEeCC-CCEEEEEecc
Confidence 47888997 776665543 2 45678899999 65 5554321 258899988 555544 221
Q ss_pred CCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC----CCccccCcccceeeccCCCCCCCCceEeEeeceeEE-
Q 004475 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG----DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS- 302 (751)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~- 302 (751)
... .....+..++++|||+ ++++...+.. .........+.|++++.+ + ....+........
T Consensus 111 ~~~--------~~~~~~~~i~~d~~g~--l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g-~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 111 SEG--------RRMQGCNDCAFDYEGN--LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD---G-QMIQVDTAFQFPNG 176 (314)
T ss_dssp TTS--------CBCBCCCEEEECTTSC--EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT---S-CEEEEEEEESSEEE
T ss_pred CCC--------ccccCCcCEEECCCCC--EEEEecCcccccccccccccCCCCeEEEECCC---C-CEEEeccCCCCcce
Confidence 100 0112356899999996 5554422100 000001112478888763 2 3333333222334
Q ss_pred EEEe----cCCceEEEeeeecccceeEEEecCC-CCCCcce-eeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCc
Q 004475 303 VSWC----DDSLALVNETWYKTSQTRTWLVCPG-SKDVAPR-VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 376 (751)
Q Consensus 303 ~~~s----pdg~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 376 (751)
+.|+ |||+.|+++.. ....|++++.+ ++..... .+....... .. ....+++++||+.++...
T Consensus 177 i~~~~~~d~dg~~l~v~~~---~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~--~p~~i~~d~~G~l~v~~~------ 244 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAET---PTKKLWSYDIKGPAKIENKKVWGHIPGTH-EG--GADGMDFDEDNNLLVANW------ 244 (314)
T ss_dssp EEEEECTTSCEEEEEEEET---TTTEEEEEEEEETTEEEEEEEEEECCCCS-SC--EEEEEEEBTTCCEEEEEE------
T ss_pred EEEecccCCCCCEEEEEEC---CCCeEEEEECCCCCccccceEEEECCCCC-CC--CCCceEECCCCCEEEEEc------
Confidence 7899 99987776542 23467777765 2200001 111111000 00 000167888886433322
Q ss_pred ceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEE
Q 004475 377 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 456 (751)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~ 456 (751)
....|.+||.++++......... .....+++++||+.|++.... ...|+++
T Consensus 245 ---------------~~~~i~~~d~~~g~~~~~~~~~~-----------~~~~~i~~~~dg~~l~v~~~~---~~~l~~~ 295 (314)
T 1pjx_A 245 ---------------GSSHIEVFGPDGGQPKMRIRCPF-----------EKPSNLHFKPQTKTIFVTEHE---NNAVWKF 295 (314)
T ss_dssp ---------------TTTEEEEECTTCBSCSEEEECSS-----------SCEEEEEECTTSSEEEEEETT---TTEEEEE
T ss_pred ---------------CCCEEEEEcCCCCcEeEEEeCCC-----------CCceeEEECCCCCEEEEEeCC---CCeEEEE
Confidence 12368888988666543332221 112235789999877766522 3579999
Q ss_pred EcCC
Q 004475 457 SWPL 460 (751)
Q Consensus 457 ~~~~ 460 (751)
++..
T Consensus 296 ~~~~ 299 (314)
T 1pjx_A 296 EWQR 299 (314)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 8764
No 448
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=3.8e-05 Score=80.35 Aligned_cols=225 Identities=8% Similarity=0.016 Sum_probs=137.3
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce----eeeeccCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~ 230 (751)
..|..+++++ ....+... .....++|++++..|+++... ...|+++++++.. ...+...
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~------------~~~I~~~~~~g~~~~~~~~~~~~~--- 156 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISR--- 156 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEEC------CCCEEEECS---
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecC------------CCeEEEEEcccCCCCCcceEEEeC---
Confidence 5789999966 44555444 677899999999999887433 3468888887632 2222111
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDD 308 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spd 308 (751)
....+.++++.+.++. ||++.. ....|.+++++ +...+.+.... .... ++..|.
T Consensus 157 ---------~~~~p~glavD~~~~~-lY~~d~-----------~~~~I~~~~~~---g~~~~~l~~~~~~~P~~iavdp~ 212 (400)
T 3p5b_L 157 ---------DIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADTK---GVKRKTLFRENGSKPRAIVVDPV 212 (400)
T ss_dssp ---------SCSCEEEEEEETTTTE-EEEEET-----------TTTEEEEECTT---TCSEEEEEECSSCCEEEEEEETT
T ss_pred ---------CCCCcccEEEEecCCc-eEEEEC-----------CCCeEEEEeCC---CCceEEEEeCCCCCcceEEEecc
Confidence 1122447888887777 888652 23578888886 55555555432 2234 788998
Q ss_pred CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 388 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~ 388 (751)
+..|+++.... ...|+++++++. ..+.+.......-. .++++++++.|++..
T Consensus 213 ~g~ly~td~~~--~~~I~~~~~dG~--~~~~~~~~~l~~P~------glavd~~~~~lY~aD------------------ 264 (400)
T 3p5b_L 213 HGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWPN------GITLDLLSGRLYWVD------------------ 264 (400)
T ss_dssp TTEEEEEECSS--SCCEEEEETTSC--SCEEEECSSCSCEE------EEEEETTTTEEEEEE------------------
T ss_pred cCeEEEEeCCC--CCEEEEEeCCCC--ccEEEEECCCCceE------EEEEEeCCCEEEEEE------------------
Confidence 88888765322 357999999884 34444433221111 178999999998876
Q ss_pred CCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 389 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 389 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
.....|+++|++++..+.+..... .+.++ ..++.+++.|+++.+. ...|++++..+|+..
T Consensus 265 --~~~~~I~~~d~dG~~~~~~~~~~~--~l~~P---------~gl~v~~~~lywtd~~---~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 265 --SKLHSISSIDVNGGNRKTILEDEK--RLAHP---------FSLAVFEDKVFWTDII---NEAIFSANRLTGSDV 324 (400)
T ss_dssp --TTTTEEEEEETTSCCCEEEEECSS--TTSSE---------EEEEEETTEEEEEESS---SCSEEEEESSSCCCC
T ss_pred --CCCCEEEEEeCCCCccEEEEeCCC--CCCCC---------EEEEEeCCEEEEecCC---CCeEEEEEcCCCCce
Confidence 234579999998665555543321 11112 2333466778877633 345888886665433
No 449
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.55 E-value=9.3e-08 Score=100.56 Aligned_cols=107 Identities=9% Similarity=-0.030 Sum_probs=71.9
Q ss_pred ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 004475 512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 588 (751)
Q Consensus 512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 588 (751)
.|+||++||.+ + +....|.......+++ .+|.|+++ |.+|.|.+... ........+++.++
T Consensus 70 ~p~vvliHG~~-----------~--s~~~~w~~~l~~~ll~~~~~~VI~v---D~~g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFI-----------D--KGEENWLLDMCKNMFKVEEVNCICV---DWKKGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCC-----------C--TTCTTHHHHHHHHHTTTCCEEEEEE---ECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCC-----------C--CCCcchHHHHHHHHHhcCCeEEEEE---eCccccCCcchHHHHHHHHHHHHHHHH
Confidence 68999999953 1 1111121123334554 48999994 45555543211 11233456778888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475 589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 635 (751)
Q Consensus 589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 635 (751)
+++|.++..++.+++.|+||||||++|+.++.+.|+ +..++++.|.
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 888864433566799999999999999999999998 9999988775
No 450
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.54 E-value=1e-05 Score=83.28 Aligned_cols=252 Identities=13% Similarity=0.062 Sum_probs=121.4
Q ss_pred ceeEEeecCCCCCCCCcccccCCC-C------c-ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYP-D------G-AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP 76 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~-~------~-~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~ 76 (751)
..|+++|+.+|- ++.+.+..+. . + ........+||| +|++.-+. ..+.+.+.|.++|.++++.+.
T Consensus 106 ~~I~viD~~t~p--~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG---i~Vs~~g~--~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 106 SRIYIIDTKPNP--REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA---IYISALGN--EEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp CCEEEEECCSCT--TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC---EEEEEEEE--TTSCSCCEEEEECTTTCCEEE
T ss_pred CeEEEEECCCCC--CCceeeeeechhhcccccCCCcccceeECCCe---EEEEcCCC--cCCCCCCeEEEEECCCCeEEE
Confidence 469999997611 2222222110 0 1 122334689999 34443211 123556899999999887443
Q ss_pred -ccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhhe
Q 004475 77 -LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (751)
Q Consensus 77 -lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (751)
+..+... ...-..+.|+||++.++.+........ ..+.. .. .... ..
T Consensus 179 ~~~~~~~~--~~~~Yd~~~~p~~~~mvsS~wg~p~~~---------------~~g~~------------~~--~~~~-~~ 226 (462)
T 2ece_A 179 KWEIDRGD--QYLAYDFWWNLPNEVLVSSEWAVPNTI---------------EDGLK------------LE--HLKD-RY 226 (462)
T ss_dssp ECCSBCTT--CCCCCCEEEETTTTEEEECBCCCHHHH---------------TTCCC------------TT--THHH-HS
T ss_pred EEccCCCC--ccccceEEECCCCCEEEEccCcCcccc---------------ccccc------------hh--hhhh-cc
Confidence 3222111 001125789999996655421100000 00000 00 0000 12
Q ss_pred eeEEEEEcC-CCC-ceecCCC---ceEEe--eeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeecc--
Q 004475 156 TAQLVLGSL-DGT-AKDFGTP---AVYTA--VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD-- 226 (751)
Q Consensus 156 ~~~l~~~~~-~G~-~~~lt~~---~~~~~--~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-- 226 (751)
...|.++|+ +++ .+.+.-+ ..... ++++|||+++++...... ....+.++++..+.++...+..
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-------~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-------KDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-------TTCCEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-------cCCCceEEEEEecCCceeEEEEEe
Confidence 368899998 553 2333221 22333 456999999988765110 0013455554444333221111
Q ss_pred CC---CCCCCC---CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee--c
Q 004475 227 LP---PAEDIP---VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--D 298 (751)
Q Consensus 227 ~~---~~~~~~---~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--~ 298 (751)
.+ .....| ..+.........+.+||||++ ||++. +..+.|.++++.+ .+..+.+... .
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf-LYVSn-----------rg~d~VavfdV~d--~~~~~lv~~I~tG 365 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKF-LYLSL-----------WGIGEVRQYDISN--PFKPVLTGKVKLG 365 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCE-EEEEE-----------TTTTEEEEEECSS--TTSCEEEEEEECB
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCE-EEEEe-----------CCCCEEEEEEecC--CCCcEEEEEEEeC
Confidence 11 010111 111111233568999999998 66643 2335777777631 2233333221 1
Q ss_pred e---------------eEE-EEEecCCceEEEee
Q 004475 299 L---------------RFS-VSWCDDSLALVNET 316 (751)
Q Consensus 299 ~---------------~~~-~~~spdg~~l~~~~ 316 (751)
+ .-. +.+||||++|+.+.
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1 124 89999999987765
No 451
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.51 E-value=1.8e-05 Score=79.77 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=116.9
Q ss_pred CceeEEEEEcCCCC--eeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchh
Q 004475 60 CKLRVWIADAETGE--AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRM 137 (751)
Q Consensus 60 ~~~~l~i~~~~~g~--~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (751)
....|.+++++++. ...+..... ....+.|.+.++.|+++-..
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~-----~~~~ld~d~~~~~lyw~D~~------------------------------ 55 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLE-----DAAAVDFVFSHGLIYWSDVS------------------------------ 55 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEE-----EEEEEEEEGGGTEEEEEETT------------------------------
T ss_pred ccCeEEEEECCCCceEEEEEecCCC-----ccEEEEEEeCCCEEEEEECC------------------------------
Confidence 34789999998763 222211111 23477899988889988221
Q ss_pred hhhccCCccchhhhhhheeeEEEEEcCCCCc--e-ecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 138 TDNLLKDEYDESLFDYYTTAQLVLGSLDGTA--K-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~--~-~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
...|++++++|.. + .+... .....+++.+.+..|+++... ...|++
T Consensus 56 ------------------~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~ 105 (318)
T 3sov_A 56 ------------------EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEV 105 (318)
T ss_dssp ------------------TTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred ------------------CCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEE
Confidence 1478888886631 2 22222 344568888888888887433 346889
Q ss_pred EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (751)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (751)
+++++...+.+... ....+++++..|.+.. |+++.. .....|++++++ +...+.
T Consensus 106 ~~~dG~~~~~l~~~------------~~~~P~giavdp~~g~-ly~td~----------~~~~~I~r~~~d---G~~~~~ 159 (318)
T 3sov_A 106 SNLDGSLRKVLFWQ------------ELDQPRAIALDPSSGF-MYWTDW----------GEVPKIERAGMD---GSSRFI 159 (318)
T ss_dssp EETTSCSCEEEECS------------SCSSEEEEEEEGGGTE-EEEEEC----------SSSCEEEEEETT---SCSCEE
T ss_pred EECCCCcEEEEEeC------------CCCCccEEEEeCCCCE-EEEEec----------CCCCEEEEEEcC---CCCeEE
Confidence 99988755544221 1123458899998877 788641 123579999886 555555
Q ss_pred eEeece-eEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475 294 LHKLDL-RFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 341 (751)
Q Consensus 294 l~~~~~-~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 341 (751)
+..... .-. ++|+|+++.|+++- .....|+++++++. ..+.+.
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD---~~~~~I~~~d~dG~--~~~~~~ 204 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNLDGT--NRQAVV 204 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEE---CCCCEEEEEcCCCC--ceEEEe
Confidence 543322 223 89999999998865 33468999999873 334444
No 452
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.51 E-value=3.8e-05 Score=77.45 Aligned_cols=223 Identities=7% Similarity=-0.023 Sum_probs=135.6
Q ss_pred eEEEEEcCCCC---ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCC
Q 004475 157 AQLVLGSLDGT---AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAE 231 (751)
Q Consensus 157 ~~l~~~~~~G~---~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~ 231 (751)
..|..+++++. ...+... .....+.|.+.+..|+++... ...|++++++++.. +.+....
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~------------~~~I~r~~~~g~~~~~~~~~~~--- 77 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS------------EEAIKRTEFNKTESVQNVVVSG--- 77 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSSSCCCEEEEEC---
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC------------CCcEEEEEccCCCceEEEEcCC---
Confidence 58899999663 2222222 456688999988889887433 34688999887632 1111100
Q ss_pred CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE-EEEecCC
Q 004475 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS-VSWCDDS 309 (751)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~-~~~spdg 309 (751)
-..+.++++.+.+.. ||++.. ....|.+++++ +...+.+... ..... +++.|.+
T Consensus 78 ---------l~~p~glavd~~~g~-ly~~d~-----------~~~~I~~~~~d---G~~~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 78 ---------LLSPDGLACDWLGEK-LYWTDS-----------ETNRIEVSNLD---GSLRKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp ---------CSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SCSCEEEECSSCSSEEEEEEEGGG
T ss_pred ---------CCCccEEEEEcCCCe-EEEEEC-----------CCCEEEEEECC---CCcEEEEEeCCCCCccEEEEeCCC
Confidence 012347889887777 788652 23578888886 5555555432 22334 7889988
Q ss_pred ceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCC
Q 004475 310 LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 389 (751)
Q Consensus 310 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~ 389 (751)
..|+++... ....|+++++++. ..+.+....... +..++++|+++.|++..
T Consensus 134 g~ly~td~~--~~~~I~r~~~dG~--~~~~~~~~~l~~------Pnglavd~~~~~lY~aD------------------- 184 (318)
T 3sov_A 134 GFMYWTDWG--EVPKIERAGMDGS--SRFIIINSEIYW------PNGLTLDYEEQKLYWAD------------------- 184 (318)
T ss_dssp TEEEEEECS--SSCEEEEEETTSC--SCEEEECSSCSC------EEEEEEETTTTEEEEEE-------------------
T ss_pred CEEEEEecC--CCCEEEEEEcCCC--CeEEEEECCCCC------ccEEEEeccCCEEEEEE-------------------
Confidence 888776532 2358999999874 334443322211 11188999999998877
Q ss_pred CCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475 390 EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 464 (751)
Q Consensus 390 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~ 464 (751)
.....|+++|++++..+.+..... ..+.+ +++ +++.++++.+ ....|++++..+|+..
T Consensus 185 -~~~~~I~~~d~dG~~~~~~~~~~~----~~P~g-------lav--~~~~lywtd~---~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 185 -AKLNFIHKSNLDGTNRQAVVKGSL----PHPFA-------LTL--FEDILYWTDW---STHSILACNKYTGEGL 242 (318)
T ss_dssp -TTTTEEEEEETTSCSCEEEECSCC----SCEEE-------EEE--ETTEEEEEET---TTTEEEEEETTTCCSC
T ss_pred -CCCCEEEEEcCCCCceEEEecCCC----CCceE-------EEE--eCCEEEEEec---CCCeEEEEECCCCCce
Confidence 234579999997655544433111 11222 233 5667887743 3567999998776543
No 453
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.49 E-value=0.0003 Score=77.76 Aligned_cols=121 Identities=2% Similarity=-0.119 Sum_probs=74.3
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 382 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 382 (751)
+.|.+.+..|+++.. ....|+++++++. ..+.+......... -+++...+..|++..
T Consensus 354 ld~d~~~~~ly~sD~---~~~~I~r~~~~g~--~~~~v~~~~~~~p~------GlAvD~~~~~lY~tD------------ 410 (619)
T 3s94_A 354 IDYDPVEGYIYWTDD---EVRAIRRSFIDGS--GSQFVVTAQIAHPD------GIAVDWVARNLYWTD------------ 410 (619)
T ss_dssp EEEETTTTEEEEEET---TTTEEEEEETTSC--SCEEEECSSCSCCC------EEEEETTTTEEEEEE------------
T ss_pred EEEEcCCCeEEEEeC---CCCeEEEEEcCCC--ccEEEEECCCCCcC------ceEEecccCcEEEEe------------
Confidence 778887777877652 3457999998874 33344332211111 166776667777765
Q ss_pred ccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCc
Q 004475 383 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 462 (751)
Q Consensus 383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~ 462 (751)
.....|.+.++++...+.+.... ...+..+++.|..+.|+|+.+.. .+.|+++++++..
T Consensus 411 --------~~~~~I~v~~~~G~~~~~l~~~~-----------l~~P~~iavdp~~G~ly~tD~g~--~~~I~r~~~dG~~ 469 (619)
T 3s94_A 411 --------TGTDRIEVTRLNGTMRKILISED-----------LEEPRAIVLDPMVGYMYWTDWGE--IPKIERAALDGSD 469 (619)
T ss_dssp --------TTTTEEEEEETTSCSCEEEECTT-----------CCSEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCS
T ss_pred --------CCCCcEEEEeCCCCeEEEEEECC-----------CCCeeeEEEEcCCCcEEEecCCC--CCEEEEEccCCCc
Confidence 12347888888765444443221 11233468888878899887543 5789999988755
Q ss_pred eeEee
Q 004475 463 SSQIT 467 (751)
Q Consensus 463 ~~~lt 467 (751)
.+.+.
T Consensus 470 ~~~l~ 474 (619)
T 3s94_A 470 RVVLV 474 (619)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 55554
No 454
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.48 E-value=1.8e-05 Score=79.89 Aligned_cols=238 Identities=10% Similarity=0.077 Sum_probs=131.6
Q ss_pred ceeEEeecCCCCCCCCcccccCCC----CcccccceeecCC-CCeEEEEEeecccccccCCceeEEEEEcCCCCeeec-c
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYP----DGAKINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-F 78 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~----~~~~~~~p~~SPD-G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~l-t 78 (751)
..|+++++.+ |+.+.+.. + .........++|| |+ |.++. ....|++++.+ |+.+.+ .
T Consensus 46 ~~i~~~d~~~----g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~-l~v~~----------~~~~l~~~d~~-g~~~~~~~ 108 (314)
T 1pjx_A 46 GEILRIDLKT----GKKTVICK-PEVNGYGGIPAGCQCDRDANQ-LFVAD----------MRLGLLVVQTD-GTFEEIAK 108 (314)
T ss_dssp CEEEEECTTT----CCEEEEEC-CEETTEECCEEEEEECSSSSE-EEEEE----------TTTEEEEEETT-SCEEECCS
T ss_pred CEEEEEeCCC----CcEEEEEe-cccCCCCCCCceEEEecCCCc-EEEEE----------CCCCEEEEeCC-CCEEEEEe
Confidence 3588888877 88776642 1 1124567889999 64 43331 12379999998 777666 4
Q ss_pred CCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeE
Q 004475 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (751)
Q Consensus 79 ~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (751)
..........+..++++|||+ |+++........ . .. .... ......
T Consensus 109 ~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~-~--~~------~~~~------------------------~~~~~~ 154 (314)
T 1pjx_A 109 KDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAP-A--DY------TRSM------------------------QEKFGS 154 (314)
T ss_dssp BCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTT-S--CC------CBTT------------------------SSSCEE
T ss_pred ccCCCccccCCcCEEECCCCC-EEEEecCccccc-c--cc------cccc------------------------cCCCCe
Confidence 322110011256789999996 455432110000 0 00 0000 002257
Q ss_pred EEEEcCCCCceecCCC-ceEEeeeeC----CCCceEEEEEecCCcccccccCCCceeEEEEeCC-Cceee---eeccCCC
Q 004475 159 LVLGSLDGTAKDFGTP-AVYTAVEPS----PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVR---ELCDLPP 229 (751)
Q Consensus 159 l~~~~~~G~~~~lt~~-~~~~~~~~S----pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~---~l~~~~~ 229 (751)
|+.++.+|+.+.+... .....++|+ |||+.|++.... ...|++++.+ .+... .+...+.
T Consensus 155 l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 155 IYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp EEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred EEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCccccceEEEECCC
Confidence 8999887765554333 445678999 999988876432 2468888865 33221 1111111
Q ss_pred CCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecC
Q 004475 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDD 308 (751)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spd 308 (751)
.. ...+..+++++||+ ++++.. ..+.|++++.+ ++.....+........ +.++||
T Consensus 223 ~~---------~~~p~~i~~d~~G~--l~v~~~-----------~~~~i~~~d~~--~g~~~~~~~~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 223 TH---------EGGADGMDFDEDNN--LLVANW-----------GSSHIEVFGPD--GGQPKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp CS---------SCEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECTT--CBSCSEEEECSSSCEEEEEECTT
T ss_pred CC---------CCCCCceEECCCCC--EEEEEc-----------CCCEEEEEcCC--CCcEeEEEeCCCCCceeEEECCC
Confidence 10 01245789999996 444321 12468888764 1222333332223445 788999
Q ss_pred CceEEEeeeecccceeEEEecCCC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
|+.|+++... ...|++++++.
T Consensus 279 g~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 279 TKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp SSEEEEEETT---TTEEEEEECSS
T ss_pred CCEEEEEeCC---CCeEEEEeCCC
Confidence 9988776522 24688888765
No 455
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.48 E-value=2.5e-05 Score=83.23 Aligned_cols=227 Identities=11% Similarity=0.068 Sum_probs=129.9
Q ss_pred eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (751)
Q Consensus 36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 115 (751)
-++++||++|+... ..+.|.++++.+++......+... .+..++| |++.|+..+.+
T Consensus 137 ~~~~~d~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~h~~----~v~~l~~--~~~~l~sg~~d-------- 192 (435)
T 1p22_A 137 YCLQYDDQKIVSGL----------RDNTIKIWDKNTLECKRILTGHTG----SVLCLQY--DERVIITGSSD-------- 192 (435)
T ss_dssp EEEECCSSEEEEEE----------SSSCEEEEESSSCCEEEEECCCSS----CEEEEEC--CSSEEEEEETT--------
T ss_pred EEEEECCCEEEEEe----------CCCeEEEEeCCCCeEEEEEcCCCC----cEEEEEE--CCCEEEEEcCC--------
Confidence 36778999998863 346788889888876554433221 3556666 88888877442
Q ss_pred CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCceEEEE
Q 004475 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLIT 192 (751)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~ 192 (751)
+.|.++|+ +|+ ...+..+ ..+..+.|++ ..|+..
T Consensus 193 -----------------------------------------g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~ 229 (435)
T 1p22_A 193 -----------------------------------------STVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTC 229 (435)
T ss_dssp -----------------------------------------SCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEE
T ss_pred -----------------------------------------CeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEe
Confidence 46777888 663 3444444 6788888874 355554
Q ss_pred EecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCcccc
Q 004475 193 SMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEV 272 (751)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~ 272 (751)
+. ...+.+||+.++....+... +......+..+.| +|+. ++..+
T Consensus 230 s~-------------dg~i~vwd~~~~~~~~~~~~---------~~~~~~~v~~~~~--~~~~-l~s~~----------- 273 (435)
T 1p22_A 230 SK-------------DRSIAVWDMASPTDITLRRV---------LVGHRAAVNVVDF--DDKY-IVSAS----------- 273 (435)
T ss_dssp ET-------------TSCEEEEECSSSSCCEEEEE---------ECCCSSCEEEEEE--ETTE-EEEEE-----------
T ss_pred eC-------------CCcEEEEeCCCCCCceeeeE---------ecCCCCcEEEEEe--CCCE-EEEEe-----------
Confidence 33 24688999976543211000 0111122345566 7776 55543
Q ss_pred CcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCC
Q 004475 273 SPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 351 (751)
Q Consensus 273 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 351 (751)
..+.|.++++.. +.....+......+. +.| +++.|+.+.. ...|.+.++.++ ............+
T Consensus 274 -~dg~i~vwd~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~----dg~i~iwd~~~~--~~~~~~~~h~~~v--- 339 (435)
T 1p22_A 274 -GDRTIKVWNTST--CEFVRTLNGHKRGIACLQY--RDRLVVSGSS----DNTIRLWDIECG--ACLRVLEGHEELV--- 339 (435)
T ss_dssp -TTSEEEEEETTT--CCEEEEEECCSSCEEEEEE--ETTEEEEEET----TSCEEEEETTTC--CEEEEECCCSSCE---
T ss_pred -CCCeEEEEECCc--CcEEEEEcCCCCcEEEEEe--CCCEEEEEeC----CCeEEEEECCCC--CEEEEEeCCcCcE---
Confidence 235788888851 223333444444555 666 5677766552 245777777764 2222222222222
Q ss_pred CCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCc
Q 004475 352 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 405 (751)
Q Consensus 352 ~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 405 (751)
.+.+.||+.|+..+.+ ..|.+||+.+++
T Consensus 340 -----~~~~~~~~~l~sg~~d---------------------g~i~vwd~~~~~ 367 (435)
T 1p22_A 340 -----RCIRFDNKRIVSGAYD---------------------GKIKVWDLVAAL 367 (435)
T ss_dssp -----EEEECCSSEEEEEETT---------------------SCEEEEEHHHHT
T ss_pred -----EEEEecCCEEEEEeCC---------------------CcEEEEECCCCC
Confidence 2233488888877732 268888886543
No 456
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.47 E-value=1.4e-05 Score=85.11 Aligned_cols=194 Identities=15% Similarity=0.143 Sum_probs=113.5
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (751)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~ 83 (751)
...|.+||+.+ ++...... .....+...+| ||+.|+... ..+.|.++++.+++..........
T Consensus 152 dg~i~iwd~~~----~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h~~ 214 (435)
T 1p22_A 152 DNTIKIWDKNT----LECKRILT-GHTGSVLCLQY--DERVIITGS----------SDSTVRVWDVNTGEMLNTLIHHCE 214 (435)
T ss_dssp SSCEEEEESSS----CCEEEEEC-CCSSCEEEEEC--CSSEEEEEE----------TTSCEEEEESSSCCEEEEECCCCS
T ss_pred CCeEEEEeCCC----CeEEEEEc-CCCCcEEEEEE--CCCEEEEEc----------CCCeEEEEECCCCcEEEEEcCCCC
Confidence 34789999988 77665431 12224555555 888887753 346788889888875443332221
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.+..+.|++ +.|+..+.+ ..|.++|
T Consensus 215 ----~v~~l~~~~--~~l~s~s~d-------------------------------------------------g~i~vwd 239 (435)
T 1p22_A 215 ----AVLHLRFNN--GMMVTCSKD-------------------------------------------------RSIAVWD 239 (435)
T ss_dssp ----CEEEEECCT--TEEEEEETT-------------------------------------------------SCEEEEE
T ss_pred ----cEEEEEEcC--CEEEEeeCC-------------------------------------------------CcEEEEe
Confidence 366778864 466665432 3567777
Q ss_pred C-CCCc----eecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCc
Q 004475 164 L-DGTA----KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVC 236 (751)
Q Consensus 164 ~-~G~~----~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~ 236 (751)
+ +++. ..+..+ ..+..+.| ||++|+....+ ..+.+||+.+++.. .+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~--------- 295 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD-------------RTIKVWNTSTCEFVRTLNGH--------- 295 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT-------------SEEEEEETTTCCEEEEEECC---------
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC-------------CeEEEEECCcCcEEEEEcCC---------
Confidence 7 4432 233333 56777777 88888776543 36889999876543 22211
Q ss_pred cCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEe
Q 004475 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNE 315 (751)
Q Consensus 237 ~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~ 315 (751)
...+..+.| +++. ++... ..+.|.++++.. +.....+......+. +.| |++.|+.+
T Consensus 296 ----~~~v~~~~~--~~~~-l~~g~------------~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 296 ----KRGIACLQY--RDRL-VVSGS------------SDNTIRLWDIEC--GACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp ----SSCEEEEEE--ETTE-EEEEE------------TTSCEEEEETTT--CCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred ----CCcEEEEEe--CCCE-EEEEe------------CCCeEEEEECCC--CCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 122345566 4555 44433 235788888751 223333444444555 666 88887776
Q ss_pred e
Q 004475 316 T 316 (751)
Q Consensus 316 ~ 316 (751)
+
T Consensus 353 ~ 353 (435)
T 1p22_A 353 A 353 (435)
T ss_dssp E
T ss_pred e
Confidence 5
No 457
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.45 E-value=5.1e-05 Score=75.45 Aligned_cols=227 Identities=12% Similarity=0.071 Sum_probs=122.7
Q ss_pred ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-ccccceeeeeEEe-cCCcEEEEeecCCCC
Q 004475 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWV-NNSTLLIFTIPSSRR 110 (751)
Q Consensus 33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-~~~~~~~~~~~ws-pDg~~l~~~~~~~~~ 110 (751)
....+++|||+ |+++. .....|++++.++...+.+..... .........++++ ++|+ |++....
T Consensus 32 p~~v~~~~~g~-l~v~~---------~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~--- 97 (286)
T 1q7f_A 32 PSGVAVNAQND-IIVAD---------TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS--- 97 (286)
T ss_dssp EEEEEECTTCC-EEEEE---------GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG---
T ss_pred CceEEECCCCC-EEEEE---------CCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC---
Confidence 56678999996 43332 234678899987544444422110 0000124567885 5664 5554210
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCc-eecCCC--ceEEeeeeCCCCc
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA-KDFGTP--AVYTAVEPSPDQK 187 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~-~~lt~~--~~~~~~~~SpDG~ 187 (751)
....|++++.+|+. +.+... .....++++|||+
T Consensus 98 --------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 133 (286)
T 1q7f_A 98 --------------------------------------------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR 133 (286)
T ss_dssp --------------------------------------------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC
T ss_pred --------------------------------------------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC
Confidence 01468888887743 334322 4567899999997
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~ 267 (751)
|++.... ...|++|+.++.....+.... ....++.++++|||+ ++++..
T Consensus 134 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~-----------~~~~p~~i~~~~~g~--l~v~~~----- 182 (286)
T 1q7f_A 134 -IIVVECK------------VMRVIIFDQNGNVLHKFGCSK-----------HLEFPNGVVVNDKQE--IFISDN----- 182 (286)
T ss_dssp -EEEEETT------------TTEEEEECTTSCEEEEEECTT-----------TCSSEEEEEECSSSE--EEEEEG-----
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEeCCCC-----------ccCCcEEEEECCCCC--EEEEEC-----
Confidence 5555322 346889998776554442110 012345899999987 455431
Q ss_pred CccccCcccceeeccCCCCCCCCceEeEeec--eeEE-EEEecCCceEEEeeeecccce-eEEEecCCCCCCcceeeeec
Q 004475 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFS-VSWCDDSLALVNETWYKTSQT-RTWLVCPGSKDVAPRVLFDR 343 (751)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~-~~~spdg~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~~ 343 (751)
....|++++.+ +.....+.... .... +++++||+. +++.. ... .|.+++.++. ....+...
T Consensus 183 ------~~~~i~~~~~~---g~~~~~~~~~g~~~~p~~i~~d~~G~l-~v~~~---~~~~~i~~~~~~g~--~~~~~~~~ 247 (286)
T 1q7f_A 183 ------RAHCVKVFNYE---GQYLRQIGGEGITNYPIGVGINSNGEI-LIADN---HNNFNLTIFTQDGQ--LISALESK 247 (286)
T ss_dssp ------GGTEEEEEETT---CCEEEEESCTTTSCSEEEEEECTTCCE-EEEEC---SSSCEEEEECTTSC--EEEEEEES
T ss_pred ------CCCEEEEEcCC---CCEEEEEccCCccCCCcEEEECCCCCE-EEEeC---CCCEEEEEECCCCC--EEEEEccc
Confidence 23578888864 33223332211 2344 889999974 33331 222 7888887652 22222221
Q ss_pred cc-ccccCCCCCCCeeeCCCCCEEEEee
Q 004475 344 VF-ENVYSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 344 ~~-~~~~~~~~~~~~~~spDG~~l~~~~ 370 (751)
.. .... .++++|||+ |++..
T Consensus 248 ~~~~~~~------~i~~~~~g~-l~vs~ 268 (286)
T 1q7f_A 248 VKHAQCF------DVALMDDGS-VVLAS 268 (286)
T ss_dssp SCCSCEE------EEEEETTTE-EEEEE
T ss_pred CCCCcce------eEEECCCCc-EEEEC
Confidence 11 1111 177899996 44444
No 458
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.45 E-value=2.2e-06 Score=96.46 Aligned_cols=180 Identities=12% Similarity=-0.018 Sum_probs=111.4
Q ss_pred CceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhh
Q 004475 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (751)
Q Consensus 60 ~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (751)
....|+++++++++...+..... ....++|+++++.|+++-..
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~-----~p~gla~d~~~~~Ly~sD~~-------------------------------- 426 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS-------------------------------- 426 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCT-----TCCCCEEETTTTEEEECCTT--------------------------------
T ss_pred CccceEEEeCCCCcceeeeccCc-----ceEEEccccccCeEEEEecC--------------------------------
Confidence 33678889988877766643332 24578999998889887221
Q ss_pred hccCCccchhhhhhheeeEEEEEcCCC-----CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEE
Q 004475 140 NLLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQ 212 (751)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~~~~G-----~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~ 212 (751)
...|++++++| ....+.. . .....+++.+.++.|+++... ...|+
T Consensus 427 ----------------~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~------------~~~I~ 478 (699)
T 1n7d_A 427 ----------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVS 478 (699)
T ss_dssp ----------------TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT------------TSCEE
T ss_pred ----------------CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc------------CCeEE
Confidence 03566777743 2222222 1 234467888777788775322 34688
Q ss_pred EEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCce
Q 004475 213 VWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE 292 (751)
Q Consensus 213 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 292 (751)
+++++++..+.+.... ...++.++++|++.+ ||++.. .....|++++++ +...+
T Consensus 479 v~d~dg~~~~~l~~~~------------~~~P~giavDp~~g~-ly~td~----------~~~~~I~~~~~d---G~~~~ 532 (699)
T 1n7d_A 479 VADTKGVKRKTLFREQ------------GSKPRAIVVDPVHGF-MYWTDW----------GTPAKIKKGGLN---GVDIY 532 (699)
T ss_dssp EEBSSSCCEEEECCCS------------SCCCCCEECCSSSSC-CEECCC----------SSSCCEEBCCSS---SCCCC
T ss_pred EEecCCCceEEEEeCC------------CCCcceEEEccCCCc-EEEccc----------CCCCeEEEEeCC---CCCee
Confidence 9999887655543211 122457899998887 777531 112578888886 44444
Q ss_pred EeEeecee-EE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 293 ILHKLDLR-FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 293 ~l~~~~~~-~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
.+...... .. ++|+|+++.|+++. .....|+++++++.
T Consensus 533 ~l~~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG 572 (699)
T ss_dssp EESCSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECSSSS
T ss_pred EEEeCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEccCCC
Confidence 44332222 23 89999999998866 23468999999873
No 459
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=3.3e-05 Score=87.39 Aligned_cols=227 Identities=12% Similarity=-0.029 Sum_probs=140.2
Q ss_pred ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (751)
Q Consensus 61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (751)
...|+.+++++++..++..... ....++|.+.++.|+++...
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~-----~~~gl~~d~~~~~lY~sD~~--------------------------------- 444 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS--------------------------------- 444 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred ccceeEeeccCCcceeeecCCC-----ceEEEeecccCCeeEEeecc---------------------------------
Confidence 3678888888777666654332 24678899988889887321
Q ss_pred ccCCccchhhhhhheeeEEEEEcCCC-----CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475 141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (751)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-----~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~ 213 (751)
...|++++++| ..+.+.. . .....+++.+.++.||++... ...|++
T Consensus 445 ---------------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v 497 (791)
T 3m0c_C 445 ---------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 497 (791)
T ss_dssp ---------------TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred ---------------ceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEE
Confidence 13677777754 2233332 2 445678888899999887433 347899
Q ss_pred EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (751)
Q Consensus 214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (751)
++++++..+.|....+ ..++++++.|.+.+ |||+... ....|++++++ +...+.
T Consensus 498 ~~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~-LYwtD~g----------~~~~I~~~~~d---G~~~~~ 551 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGLN---GVDIYS 551 (791)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEETT---SCCEEE
T ss_pred EeCCCCeEEEEEeCCC------------CCcceEEEecCCCC-EEEecCC----------CCCeEEEEecC---CCceEE
Confidence 9999876665533211 23568999999887 8886511 12578899886 655555
Q ss_pred eEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475 294 LHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 371 (751)
Q Consensus 294 l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~ 371 (751)
+.... ..-. ++++++++.||++- .....|+++++++. ..+.+....... ..| +..+.++..|++...
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~dG~--~~~~v~~~~~~l-----~~P-~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG--NRKTILEDEKRL-----AHP-FSLAVFEDKVFWTDI 620 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEEECTTTT-----SSE-EEEEEETTEEEEEET
T ss_pred EEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEecCCC--ceEEEecCCCcc-----CCC-CEEEEeCCEEEEEEC
Confidence 55433 2234 88899999888865 23458999999884 344444321111 111 334446667766652
Q ss_pred ecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475 372 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 409 (751)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 409 (751)
....|++++..+|+...+
T Consensus 621 --------------------~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 621 --------------------INEAIFSANRLTGSDVNL 638 (791)
T ss_dssp --------------------TTTEEEEEETTTCCCCEE
T ss_pred --------------------CCCEEEEEeCCCCcceEE
Confidence 334777788766654433
No 460
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.41 E-value=1.1e-05 Score=85.84 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=91.5
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCC-----Ce-ee---ccCCCCccccceeeeeEEecC-CcEE
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-----EA-KP---LFESPDICLNAVFGSFVWVNN-STLL 101 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g-----~~-~~---lt~~~~~~~~~~~~~~~wspD-g~~l 101 (751)
.+...+|||||++||..... +.....|.++++.++ +. +. +.....+ ...+..++|+|+ ++.|
T Consensus 94 ~v~~l~~spdg~~lav~~~s------gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS------SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA--GGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE------TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG--GGSEEEEEECSSCTTEE
T ss_pred cccEEEEcCCCCEEEEEEec------cCCCceEEEEEccccccCCcCCcceeeeeeccCCC--CCceEEEEECCCCCCEE
Confidence 47889999999999863210 044578888888764 11 11 1111111 124778999998 6777
Q ss_pred EEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCC-ceEE
Q 004475 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP-AVYT 178 (751)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~-~~~~ 178 (751)
+..+.+ ..|.++|+ ++.. .....+ ..+.
T Consensus 166 as~s~D-------------------------------------------------g~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 166 AVCLAD-------------------------------------------------GSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEETT-------------------------------------------------SCEEEEEESSSEEEEEEECGGGCEE
T ss_pred EEEECC-------------------------------------------------CeEEEEEcCCCcceeeccCCCCcee
Confidence 766432 45777777 4522 222223 6788
Q ss_pred eeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEE
Q 004475 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (751)
Q Consensus 179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~ 258 (751)
.++|||||++|+....+ ..+.+||.++...+.+....... ......+..+.|++++..+++
T Consensus 197 ~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~~~~~~~~------~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVIPCPPFYE------SDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp EEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEECCCTTCC------TTSCEEEEEEEEEETTEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccccCCcccC------CCCceeEEEEEEecCceEEEE
Confidence 99999999999887543 36889999854343332221110 001123568999999877334
Q ss_pred E
Q 004475 259 W 259 (751)
Q Consensus 259 ~ 259 (751)
+
T Consensus 258 ~ 258 (434)
T 2oit_A 258 Y 258 (434)
T ss_dssp E
T ss_pred E
Confidence 4
No 461
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.40 E-value=8.5e-05 Score=76.14 Aligned_cols=142 Identities=9% Similarity=0.017 Sum_probs=77.8
Q ss_pred CCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC---CccccceeeeeEEe
Q 004475 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP---DICLNAVFGSFVWV 95 (751)
Q Consensus 19 g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~---~~~~~~~~~~~~ws 95 (751)
|+.+.+.... ......+++|||+.++-..+. . .+...||.++ +|+.+++.... ...+ .....++++
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~----~--~~~~~l~~~~--~g~~~~~p~~~~~~~~~~-~~p~gv~~d 75 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGRLFLSLHQF----Y--QPEMQVAELT--QDGLIPFPPQSGNAIITF-DTVLGIKSD 75 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSCEEEEECGG----G--CCSCSEEEEE--TTEEEESCCCCSSCCCCC-SCEEEEEEC
T ss_pred ceeEEEEEcC--CCcceEEECCCCCEEEEeCCC----C--CCceEEEEEC--CCCeecCCCcccCcccce-eEeeEEEEc
Confidence 5555555333 246778999999754332110 0 1125888888 56555442211 0011 135678999
Q ss_pred cCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCC
Q 004475 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT 173 (751)
Q Consensus 96 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~ 173 (751)
|+|+ |++...... . .....|+++|+ +|+ .+.+.-
T Consensus 76 ~~g~-L~v~D~g~~----------------------------~---------------~~~~~i~~~d~~tg~~~~~~~~ 111 (343)
T 2qe8_A 76 GNGI-VWMLDNGNQ----------------------------S---------------KSVPKLVAWDTLNNQLSRVIYL 111 (343)
T ss_dssp SSSE-EEEEECHHH----------------------------H---------------TSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCc-EEEEcCCCC----------------------------c---------------CCCCeEEEEECCCCeEEEEEEC
Confidence 9986 655521000 0 01147888998 675 333321
Q ss_pred ------C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee
Q 004475 174 ------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (751)
Q Consensus 174 ------~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 224 (751)
. ....+++++|++..++++.... .....|+++|+++++..++
T Consensus 112 ~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---------~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 112 PPPITLSNSFVNDLAVDLIHNFVYISDPAP---------DDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp CTTTSCTTCCCCEEEEETTTTEEEEEECCS---------GGGCEEEEEETTTCCEEEE
T ss_pred ChhhcccccccceEEEecCCCEEEEEcCcc---------CCCCeEEEEECCCCCEEEE
Confidence 1 2346889999887887764310 0145789999987665554
No 462
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.38 E-value=0.00019 Score=70.86 Aligned_cols=181 Identities=14% Similarity=0.050 Sum_probs=107.2
Q ss_pred CCceeEEEEEcCCCCee-eccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchh
Q 004475 59 SCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRM 137 (751)
Q Consensus 59 ~~~~~l~i~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (751)
.....|++++.++|+.. ++...... ....+.++|||+.|+ . ..
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~----~~~~~~~~pdG~ilv-s-~~------------------------------ 55 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAGEILF-S-YS------------------------------ 55 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTC----CCCEEEECTTSCEEE-E-CB------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccC----CCcCeEECCCCCEEE-e-CC------------------------------
Confidence 45688999998777743 33222100 245678999998666 3 11
Q ss_pred hhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC--ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEE
Q 004475 138 TDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (751)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (751)
..|+.+|.+| ...++..+ ..+..+.++|||+.|+..... +..++.+
T Consensus 56 -------------------~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~v 104 (276)
T 3no2_A 56 -------------------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILEV 104 (276)
T ss_dssp -------------------SEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEEE
T ss_pred -------------------CCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEEE
Confidence 3577777766 33444433 356688899999988765431 2357788
Q ss_pred eCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe
Q 004475 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (751)
Q Consensus 215 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 294 (751)
+.+++.+..+.-...... .....+.+..++||+. ++... ..+.|+.++.+ ++.....
T Consensus 105 d~~Gk~l~~~~~~~~~~~-------~~~~~~~v~~~~~G~~-lv~~~------------~~~~v~~~d~~---G~~~w~~ 161 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIER-------PHAQFRQINKNKKGNY-LVPLF------------ATSEVREIAPN---GQLLNSV 161 (276)
T ss_dssp CTTSCEEEEEEECCSCSS-------GGGSCSCCEECTTSCE-EEEET------------TTTEEEEECTT---SCEEEEE
T ss_pred eCCCCEEEEEeccCCCCc-------ccccccCceECCCCCE-EEEec------------CCCEEEEECCC---CCEEEEE
Confidence 887776555432111000 0112345678999996 44321 23578888875 5444443
Q ss_pred EeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 295 HKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 295 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
............++|+.|+... ...+|+.++++++
T Consensus 162 ~~~~~~~~~~~~~~g~~~v~~~----~~~~v~~~d~~tG 196 (276)
T 3no2_A 162 KLSGTPFSSAFLDNGDCLVACG----DAHCFVQLNLESN 196 (276)
T ss_dssp ECSSCCCEEEECTTSCEEEECB----TTSEEEEECTTTC
T ss_pred ECCCCccceeEcCCCCEEEEeC----CCCeEEEEeCcCC
Confidence 3322223355689999776544 2347999999865
No 463
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.38 E-value=2.3e-06 Score=73.92 Aligned_cols=64 Identities=16% Similarity=0.057 Sum_probs=45.8
Q ss_pred hCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475 552 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 624 (751)
Q Consensus 552 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~ 624 (751)
.++|.|++ ++.+|+|.+........+..+++.++++.+ +.+++.++|||+||.+|+.++.++|.
T Consensus 40 ~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYL---LDLPGYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEE---ECCTTSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEE---ECCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 34599999 556677776443322455556555555544 34689999999999999999999984
No 464
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.36 E-value=5.6e-05 Score=79.44 Aligned_cols=189 Identities=10% Similarity=-0.002 Sum_probs=106.7
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCCc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDI 83 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~~ 83 (751)
..|+++++.+ ++.+.+... ..... ++|+|||+.|+.+.. .+...||+++..++.. +.+......
T Consensus 152 ~~I~~id~~~----g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~--------~~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 152 PRVRLISVDD----NKVTTVHPG--FKGGK-PAVTKDKQRVYSIGW--------EGTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp TEEEEEETTT----TEEEEEEET--CCBCB-CEECTTSSEEEEEBS--------STTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CcEEEEECCC----CEEEEeecc--CCCCc-eeEecCCCcEEEEec--------CCCceEEEEEcCCCceeEEeeeccch
Confidence 4577888877 777766532 22233 999999998877531 2223899999887653 333100000
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
... ....++++|++..|++... . ..|++++
T Consensus 217 ~~~-~p~~iav~p~~g~lyv~d~----~---------------------------------------------~~I~~~d 246 (409)
T 3hrp_A 217 FSG-KIGAVALDETEEWLYFVDS----N---------------------------------------------KNFGRFN 246 (409)
T ss_dssp SCS-CCCBCEECTTSSEEEEECT----T---------------------------------------------CEEEEEE
T ss_pred hcC-CcEEEEEeCCCCeEEEEEC----C---------------------------------------------CcEEEEE
Confidence 001 2457799996667877411 0 4788888
Q ss_pred CC-CCceec----CCC--ceE-E-eeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCC
Q 004475 164 LD-GTAKDF----GTP--AVY-T-AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (751)
Q Consensus 164 ~~-G~~~~l----t~~--~~~-~-~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 234 (751)
++ +....+ ... ... . .++|+|++..|+++... ...|++++.++. ...+.......+..
T Consensus 247 ~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~-~~~~~g~~~~~g~~ 313 (409)
T 3hrp_A 247 VKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGE-CEWFCGSATQKTVQ 313 (409)
T ss_dssp TTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCC-EEEEEECTTCCSCB
T ss_pred CCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCC-EEEEEeCCCCCCcC
Confidence 84 443333 222 112 2 89999988888886433 346889998876 33332221000000
Q ss_pred C--ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccC
Q 004475 235 V--CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPA 283 (751)
Q Consensus 235 ~--~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~ 283 (751)
. .....-..+.+++++|||+ |+++.. .....|+++++
T Consensus 314 dg~~~~~~~~~P~gia~d~dG~--lyvad~----------~~~~~I~~~~~ 352 (409)
T 3hrp_A 314 DGLREEALFAQPNGMTVDEDGN--FYIVDG----------FKGYCLRKLDI 352 (409)
T ss_dssp CEEGGGCBCSSEEEEEECTTCC--EEEEET----------TTTCEEEEEET
T ss_pred CCcccccEeCCCeEEEEeCCCC--EEEEeC----------CCCCEEEEEEC
Confidence 0 0000012356899999997 566541 01246777774
No 465
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.35 E-value=0.00017 Score=81.68 Aligned_cols=224 Identities=8% Similarity=0.017 Sum_probs=136.6
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc----eeeeeccCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~ 230 (751)
..|..+++++ +...+... .....++|.+.+.+|+++... ...|+++++++. ..+.+...
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~------------~~~I~~~~l~g~~~~~~~~~vi~~--- 468 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISR--- 468 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECS---
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecc------------ceeEEEEeccCCCCCcceeEEEec---
Confidence 4677888854 44555444 667789999988888887443 346888888763 22222111
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDD 308 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spd 308 (751)
....+.++++.+.++. ||++.. ....|++++++ +...+.+.... .... +++.|.
T Consensus 469 ---------~l~~P~GLAvD~~~~~-LY~tD~-----------~~~~I~v~~ld---G~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 469 ---------DIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADTK---GVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp ---------SCSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SSSEEEEEECTTCCEEEEEEETT
T ss_pred ---------CCCCcceeeeeecCCc-EEEEec-----------CCCeEEEEeCC---CCeEEEEEeCCCCCcceEEEecC
Confidence 1123457899999988 888652 23589999986 55555555432 2344 889999
Q ss_pred CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 388 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~ 388 (751)
+..|+++.... ...|+++++++. ..+.+.......-. .+++++++..|++..
T Consensus 525 ~g~LYwtD~g~--~~~I~~~~~dG~--~~~~lv~~~l~~P~------GLavD~~~~~LYwaD------------------ 576 (791)
T 3m0c_C 525 HGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWPN------GITLDLLSGRLYWVD------------------ 576 (791)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSC--CEEEEECSSCSCEE------EEEEETTTTEEEEEE------------------
T ss_pred CCCEEEecCCC--CCeEEEEecCCC--ceEEEEeCCCCCce------EEEEecCCCeEEEEe------------------
Confidence 88888866322 257999999884 44444433222111 177888888888876
Q ss_pred CCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475 389 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 463 (751)
Q Consensus 389 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~ 463 (751)
.....|+++++++...+.+..... .+.+. ++++.++++|+++.+. ...|++++..+|+.
T Consensus 577 --~~~~~I~~~d~dG~~~~~v~~~~~--~l~~P---------~glav~~~~lYwtD~~---~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 577 --SKLHSISSIDVNGGNRKTILEDEK--RLAHP---------FSLAVFEDKVFWTDII---NEAIFSANRLTGSD 635 (791)
T ss_dssp --TTTTEEEEEETTSCSCEEEEECTT--TTSSE---------EEEEEETTEEEEEETT---TTEEEEEETTTCCC
T ss_pred --CCCCcEEEEecCCCceEEEecCCC--ccCCC---------CEEEEeCCEEEEEECC---CCEEEEEeCCCCcc
Confidence 233478999998766555544321 11111 2344456777777533 45788888766643
No 466
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.35 E-value=0.00014 Score=71.51 Aligned_cols=215 Identities=9% Similarity=-0.065 Sum_probs=120.7
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~ 84 (751)
..|++++..+ +..+.+. ..........+++|||+ |+++. . ...|++++.+++..+.+......
T Consensus 46 ~~i~~~~~~~----~~~~~~~-~~~~~~p~~i~~~~~g~-l~v~~---------~-~~~i~~~d~~~~~~~~~~~~~~~- 108 (270)
T 1rwi_B 46 GRVVKLATGS----TGTTVLP-FNGLYQPQGLAVDGAGT-VYVTD---------F-NNRVVTLAAGSNNQTVLPFDGLN- 108 (270)
T ss_dssp CEEEEECC---------EECC-CCSCCSCCCEEECTTCC-EEEEE---------T-TTEEEEECTTCSCCEECCCCSCS-
T ss_pred CcEEEecCCC----cccceEe-eCCcCCcceeEECCCCC-EEEEc---------C-CCEEEEEeCCCceEeeeecCCcC-
Confidence 3567776655 4444332 12222467789999998 44431 2 46899999887765554322111
Q ss_pred ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (751)
Q Consensus 85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 164 (751)
....++++|||+ |++... ....|++++.
T Consensus 109 ---~p~~i~~~~~g~-l~v~~~------------------------------------------------~~~~i~~~~~ 136 (270)
T 1rwi_B 109 ---YPEGLAVDTQGA-VYVADR------------------------------------------------GNNRVVKLAA 136 (270)
T ss_dssp ---SEEEEEECTTCC-EEEEEG------------------------------------------------GGTEEEEECT
T ss_pred ---CCcceEECCCCC-EEEEEC------------------------------------------------CCCEEEEEEC
Confidence 246788999997 555421 0136777766
Q ss_pred CC-CceecCCC--ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475 165 DG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (751)
Q Consensus 165 ~G-~~~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (751)
.+ ........ .....++++|||+ |++.... ...|++++.++.......... .
T Consensus 137 ~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~------------~ 191 (270)
T 1rwi_B 137 GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD------------NNRVVKLEAESNNQVVLPFTD------------I 191 (270)
T ss_dssp TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG------------GTEEEEECTTTCCEEECCCSS------------C
T ss_pred CCceeEeeccccCCCceeEEEeCCCC-EEEEECC------------CCEEEEEecCCCceEeecccC------------C
Confidence 33 22222211 3456789999997 6665332 246889998876543321110 0
Q ss_pred CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceEEEeeeec
Q 004475 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLALVNETWYK 319 (751)
Q Consensus 242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~ 319 (751)
..+..++++++| . ++++.. ..+.|++++.+ +.....+.... .... +.+++||+ |+++.
T Consensus 192 ~~p~~i~~d~~g-~-l~v~~~-----------~~~~v~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~--- 251 (270)
T 1rwi_B 192 TAPWGIAVDEAG-T-VYVTEH-----------NTNQVVKLLAG---STTSTVLPFTGLNTPLAVAVDSDRT-VYVAD--- 251 (270)
T ss_dssp CSEEEEEECTTC-C-EEEEET-----------TTSCEEEECTT---CSCCEECCCCSCSCEEEEEECTTCC-EEEEE---
T ss_pred CCceEEEECCCC-C-EEEEEC-----------CCCcEEEEcCC---CCcceeeccCCCCCceeEEECCCCC-EEEEE---
Confidence 234578999999 4 666541 12468888875 33333222211 2344 88999997 55544
Q ss_pred ccceeEEEecCCCC
Q 004475 320 TSQTRTWLVCPGSK 333 (751)
Q Consensus 320 ~~~~~l~~~~~~~~ 333 (751)
.....|.++++...
T Consensus 252 ~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 252 RGNDRVVKLTSLEH 265 (270)
T ss_dssp GGGTEEEEECCCGG
T ss_pred CCCCEEEEEcCCCc
Confidence 23357888887663
No 467
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.35 E-value=0.0015 Score=72.26 Aligned_cols=123 Identities=4% Similarity=-0.063 Sum_probs=73.2
Q ss_pred EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec------ccccccCCCCCCCeeeCCCCCEEEEeeeecCCc
Q 004475 303 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR------VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 376 (751)
Q Consensus 303 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 376 (751)
+.|.+..+.|+++. .....|+++++++. ....+... ...... -+++...++.|++...
T Consensus 345 ld~d~~~~~iy~sD---~~~~~I~r~~~~g~--~~~~v~~~~~~~~~~~~~p~------glAvD~~~~nLY~td~----- 408 (628)
T 4a0p_A 345 IDYDPLDKQLYWID---SRQNMIRKAQEDGS--QGFTVVVSSVPSQNLEIQPY------DLSIDIYSRYIYWTCE----- 408 (628)
T ss_dssp EEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEEC--------CCCEE------EEEEETTTTEEEEEET-----
T ss_pred EEEecCCCeEEEEe---cCcceEEEEEcCCC--CceEEEEcccccccccCCcc------eEEeeccCCeEEEEcC-----
Confidence 78888888888765 23457888888774 22333221 011111 1677778888877661
Q ss_pred ceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEE
Q 004475 377 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 456 (751)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~ 456 (751)
....|.+.++++.....+..... .. +..+++.|..+.|+|+.+... ++.|++.
T Consensus 409 ---------------~~~~I~v~~~~G~~~~~l~~~~l----~~-------Pr~iavdp~~g~ly~tD~g~~-~~~I~r~ 461 (628)
T 4a0p_A 409 ---------------ATNVINVTRLDGRSVGVVLKGEQ----DR-------PRAVVVNPEKGYMYFTNLQER-SPKIERA 461 (628)
T ss_dssp ---------------TTTEEEEEETTSCEEEEEEECTT----CC-------EEEEEEETTTTEEEEEEEETT-EEEEEEE
T ss_pred ---------------CCCEEEEEECCCCeEEEEEeCCC----Cc-------eeeEEEecCCCeEEEeecCCC-CCeEEEE
Confidence 23467777886433333332211 12 233578887778998876533 3489999
Q ss_pred EcCCCceeEeec
Q 004475 457 SWPLKKSSQITN 468 (751)
Q Consensus 457 ~~~~g~~~~lt~ 468 (751)
++++...+.|..
T Consensus 462 ~~dG~~~~~l~~ 473 (628)
T 4a0p_A 462 ALDGTEREVLFF 473 (628)
T ss_dssp ETTSCSCEEEEC
T ss_pred eCCCCCcEEEEe
Confidence 998766555554
No 468
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.35 E-value=2.7e-05 Score=77.64 Aligned_cols=144 Identities=12% Similarity=0.023 Sum_probs=71.9
Q ss_pred eEEEEEcC-CCC-ceecCCC----ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475 157 AQLVLGSL-DGT-AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~-~G~-~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 230 (751)
..|.++|+ +|+ .+.+..+ ..+...+|||||+.++....... ......+.....+.+||+.+++...+......
T Consensus 203 ~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~-~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 203 NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA-KESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC-cceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 57888999 785 4555432 23445689999999877553211 11122344567788999987764322110000
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDD 308 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spd 308 (751)
.+ ....-+..+.+|.. ++-.+ ..+.|.++|+. ++.....+.... .... ++||||
T Consensus 282 ~G---------h~~~~lsg~~sg~~-lASgS------------~DgTIkIWDl~--tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 282 PG---------QAGRFLEGDVKDHC-AAAIL------------TSGTIAIWDLL--LGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp TT---------CCCCEEEEEEETTE-EEEEE------------TTSCEEEEETT--TCSEEEEECCC--CCCCEEEECSS
T ss_pred CC---------CcceeEccccCCCE-EEEEc------------CCCcEEEEECC--CCcEEEEecCCCCCeEEEEEECCC
Confidence 00 00001122222333 22222 23578889985 132334444332 2344 789999
Q ss_pred CceEEEeeeecccceeEEE
Q 004475 309 SLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~ 327 (751)
|++|+..+. +..-.||.
T Consensus 338 G~~LaSGS~--D~TIklWd 354 (356)
T 2w18_A 338 DSHLLAGQK--DGNIFVYH 354 (356)
T ss_dssp SSEEEEECT--TSCEEEEE
T ss_pred CCEEEEEEC--CCcEEEec
Confidence 999887662 23345554
No 469
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.34 E-value=0.0029 Score=69.86 Aligned_cols=165 Identities=8% Similarity=0.055 Sum_probs=102.0
Q ss_pred CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceEEEeeeeccc
Q 004475 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLALVNETWYKTS 321 (751)
Q Consensus 244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~ 321 (751)
+.++.|.+.+.. ||++.. ....|++++.+ +...+.+.... .... +++.+.++.|+++. ..
T Consensus 351 ~~~ld~d~~~~~-ly~sD~-----------~~~~I~r~~~~---g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD---~~ 412 (619)
T 3s94_A 351 AIAIDYDPVEGY-IYWTDD-----------EVRAIRRSFID---GSGSQFVVTAQIAHPDGIAVDWVARNLYWTD---TG 412 (619)
T ss_dssp EEEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTTEEEEEE---TT
T ss_pred cEEEEEEcCCCe-EEEEeC-----------CCCeEEEEEcC---CCccEEEEECCCCCcCceEEecccCcEEEEe---CC
Confidence 457889987777 888652 23578888886 44444444332 2333 77887788887764 33
Q ss_pred ceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEec
Q 004475 322 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 401 (751)
Q Consensus 322 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 401 (751)
...|.++++++. ..+.+.......-. .+++.|....|++.... ...+|++.++
T Consensus 413 ~~~I~v~~~~G~--~~~~l~~~~l~~P~------~iavdp~~G~ly~tD~g-------------------~~~~I~r~~~ 465 (619)
T 3s94_A 413 TDRIEVTRLNGT--MRKILISEDLEEPR------AIVLDPMVGYMYWTDWG-------------------EIPKIERAAL 465 (619)
T ss_dssp TTEEEEEETTSC--SCEEEECTTCCSEE------EEEEETTTTEEEEEECS-------------------SSCEEEEEET
T ss_pred CCcEEEEeCCCC--eEEEEEECCCCCee------eEEEEcCCCcEEEecCC-------------------CCCEEEEEcc
Confidence 468999999884 33455433222111 16678875577776632 2357888888
Q ss_pred CCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 004475 402 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 467 (751)
Q Consensus 402 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt 467 (751)
++...+.+..... .. +..+++++++++|+++... ...|+.+++++...+.+.
T Consensus 466 dG~~~~~l~~~~l----~~-------P~GlalD~~~~~LY~aD~~---~~~I~~~~~dG~~~~~~~ 517 (619)
T 3s94_A 466 DGSDRVVLVNTSL----GW-------PNGLALDYDEGKIYWGDAK---TDKIEVMNTDGTGRRVLV 517 (619)
T ss_dssp TSCSCEEEECSSC----SC-------EEEEEEETTTTEEEEEETT---TTEEEEEESSSCCCEEEE
T ss_pred CCCccEEEEeCCC----CC-------CeeeEEcccCCEEEEEECC---CCEEEEEecCCCceEEEe
Confidence 7655444433211 11 2335888889999988633 457999998876555443
No 470
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.32 E-value=5e-06 Score=88.82 Aligned_cols=218 Identities=12% Similarity=0.006 Sum_probs=116.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceee-c-CCCCeEEEEEeeccc---------ccccCCceeEEEEEcCCCC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSW-S-PDGKRIAFSVRVDEE---------DNVSSCKLRVWIADAETGE 73 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~-S-PDG~~iaf~~~~~~~---------~~~~~~~~~l~i~~~~~g~ 73 (751)
..|.+.|+.+ .+..++..+|.+......++ + |||++| |+..+... .....+...+-++|.++.+
T Consensus 112 ~rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v-~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 112 TRVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYV-FCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp TEEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEE-EEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred CEEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEE-EEecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 3588999998 88888777887766666676 6 999998 44421000 0012456789999998866
Q ss_pred -eeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCC-CCCCCCCCceeeccccccccchhhhhccCCccchhhh
Q 004475 74 -AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK-KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (751)
Q Consensus 74 -~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (751)
..++.-+.. ...++.||||++++.++......... .........+.... ..+..... .++..
T Consensus 187 v~~qI~Vgg~------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~------~~~~~~~v---~~Gk~- 250 (595)
T 1fwx_A 187 VAWQVLVSGN------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFN------IAEIEKAI---AAGDY- 250 (595)
T ss_dssp EEEEEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEE------HHHHHHHH---HHTCS-
T ss_pred EEEEEEeCCC------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEee------ccceeEec---cCCCe-
Confidence 344422111 25668999999999987653322100 00000000000000 00000000 00100
Q ss_pred hhheeeEEEEEcC-C--CC--ceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeecc
Q 004475 152 DYYTTAQLVLGSL-D--GT--AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (751)
Q Consensus 152 ~~~~~~~l~~~~~-~--G~--~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 226 (751)
. ....+.++|. + ++ ...+..+.....+.+|||||+++++... ...+.++|.++.+.. ..
T Consensus 251 ~--~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~~~~--~~ 314 (595)
T 1fwx_A 251 Q--ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRFDAV--FY 314 (595)
T ss_dssp E--EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGHHHH--HH
T ss_pred e--EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECcccccc--cc
Confidence 0 1135788888 4 32 2344333456689999999999987443 457888988754210 00
Q ss_pred CCCCCCC-CCccCCccCCCceeeeecCCCceEEEEE
Q 004475 227 LPPAEDI-PVCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
..+.... ...-.....+.+.++|+||| + +|.+.
T Consensus 315 ~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~-aY~t~ 348 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGLGPLHTAFDGRG-N-AYTSL 348 (595)
T ss_dssp SCCCGGGGEEECCBCCSCEEEEEECTTS-E-EEEEE
T ss_pred cccCcccceEEEcCCCCCcceEEECCCC-e-EEEEE
Confidence 0000000 00011223457799999999 6 55543
No 471
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.32 E-value=0.00016 Score=80.08 Aligned_cols=182 Identities=10% Similarity=0.015 Sum_probs=119.7
Q ss_pred CceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhh
Q 004475 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (751)
Q Consensus 60 ~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (751)
...+|..+++++.+...+..... +. ....++|.++++.|+++...
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~--~~-~~~~l~~d~~~~~lywtD~~-------------------------------- 57 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTG--VK-EASALDFDVTDNRIYWTDIS-------------------------------- 57 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCS--CS-CEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred eCCcEEEEECCCCCcceEEEcCC--CC-ceEEEEEECCCCEEEEEECC--------------------------------
Confidence 34789999998765433321111 11 24578999998899988321
Q ss_pred hccCCccchhhhhhheeeEEEEEcCCC-CceecCC-C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeC
Q 004475 140 NLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (751)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (751)
...|++++++| ..+.+.. . .....+++.+.++.|+++... ...|.+.++
T Consensus 58 ----------------~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~------------~~~I~v~~~ 109 (628)
T 4a0p_A 58 ----------------LKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG------------TNRIEVSKL 109 (628)
T ss_dssp ----------------TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEET
T ss_pred ----------------CCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC------------CCEEEEEec
Confidence 14788888876 4444433 2 345578888888889887432 347889999
Q ss_pred CCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe
Q 004475 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (751)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 296 (751)
+++..+.|.... -..+++++..|.... ||++.. .....|++++++ +...+.+..
T Consensus 110 dG~~~~~l~~~~------------l~~P~~iavdp~~G~-lY~tD~----------g~~~~I~r~~~d---G~~~~~l~~ 163 (628)
T 4a0p_A 110 DGQHRQVLVWKD------------LDSPRALALDPAEGF-MYWTEW----------GGKPKIDRAAMD---GSERTTLVP 163 (628)
T ss_dssp TSTTCEEEECSS------------CCCEEEEEEETTTTE-EEEEEC----------SSSCEEEEEETT---SCSCEEEEC
T ss_pred CCCcEEEEEeCC------------CCCcccEEEccCCCe-EEEeCC----------CCCCEEEEEeCC---CCceEEEEC
Confidence 887655543211 123568999997766 888641 123589999986 666666654
Q ss_pred eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475 297 LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 333 (751)
Q Consensus 297 ~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 333 (751)
.-.... ++++++++.|+++- .....|+.+++++.
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD---~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTD---LDTNLIESSNMLGL 198 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred CCCCcceEEEccccCEEEEEE---CCCCEEEEEcCCCC
Confidence 333344 88999999988865 23458999999884
No 472
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.29 E-value=1.3e-05 Score=90.38 Aligned_cols=226 Identities=8% Similarity=0.022 Sum_probs=131.7
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc----eeeeeccCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK----LVRELCDLPPA 230 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~~~~l~~~~~~ 230 (751)
..|+++++++ +...+... .....++|++++..|+++... ...|+++++++. ....+..
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~------------~~~I~~~~~~g~~~~~~~~~~i~---- 449 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVIS---- 449 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTT------------TTSBEEEESCCCCC-CCCCCBCC----
T ss_pred cceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecC------------CCeEEEEecCCCCCCcceEEEEe----
Confidence 4678888855 44444433 556688999999888886332 346888888762 2211110
Q ss_pred CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecC
Q 004475 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDD 308 (751)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spd 308 (751)
.....+..+++.+.+.. ||++.. ..+.|++++++ +...+.+.... .... ++++|+
T Consensus 450 --------~~~~~P~glavD~~~g~-LY~tD~-----------~~~~I~v~d~d---g~~~~~l~~~~~~~P~giavDp~ 506 (699)
T 1n7d_A 450 --------RDIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADTK---GVKRKTLFREQGSKPRAIVVDPV 506 (699)
T ss_dssp --------SCC--CCCEECCCSSSB-CEECCT-----------TTSCEEEEBSS---SCCEEEECCCSSCCCCCEECCSS
T ss_pred --------CCCCCcceEEEEeeCCc-EEEEec-----------cCCeEEEEecC---CCceEEEEeCCCCCcceEEEccC
Confidence 01112346788877777 677431 23578888875 54444444322 2233 789998
Q ss_pred CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475 309 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT 388 (751)
Q Consensus 309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~ 388 (751)
+..|+++... ....|+++++++. ..+.+...... ....++|+|+++.|++...
T Consensus 507 ~g~ly~td~~--~~~~I~~~~~dG~--~~~~l~~~~l~------~PnGlavd~~~~~LY~aD~----------------- 559 (699)
T 1n7d_A 507 HGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQ------WPNGITLDLLSGRLYWVDS----------------- 559 (699)
T ss_dssp SSCCEECCCS--SSCCEEBCCSSSC--CCCEESCSSCS------SCCCEEECTTTCCEEEEET-----------------
T ss_pred CCcEEEcccC--CCCeEEEEeCCCC--CeeEEEeCCCC------CccEEEEeccCCEEEEEec-----------------
Confidence 8888776532 1257999998874 33333322221 1122889999998988772
Q ss_pred CCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475 389 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 465 (751)
Q Consensus 389 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~ 465 (751)
....|+++++++...+.+...... . .....++.|++.|+++.+. ...|++++..+|+..+
T Consensus 560 ---~~~~I~~~d~dG~~~~~~~~~~~~---------~--~~P~glavd~~~lywtd~~---~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 560 ---KLHSISSIDVNGGNRKTILEDEKR---------L--AHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSDVN 619 (699)
T ss_dssp ---TTTEEEEECSSSSCCEEECCCSSS---------C--SSCCCCEEETTEEEEECST---TTCEEEEETTTEEEEE
T ss_pred ---CCCeEEEEccCCCceEEEEecCCc---------C--CCceEeEEECCEEEEEeCC---CCeEEEEEccCCCceE
Confidence 234788899876544444332110 0 1112334466778777532 4579999987776543
No 473
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.29 E-value=0.0002 Score=72.78 Aligned_cols=229 Identities=13% Similarity=0.050 Sum_probs=121.9
Q ss_pred eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC--eeeccCCC--
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPLFESP-- 81 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~--~~~lt~~~-- 81 (751)
.|+++|..+ |+................+++|||+ |+++. .....|++++.++.. ...+....
T Consensus 70 ~i~~~d~~~----g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d---------~~~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 70 TILVIDPNN----AEILQSSGKNLFYLPHGLSIDTDGN-YWVTD---------VALHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CEEEECTTT----CCEEEEECTTTCSSEEEEEECTTSC-EEEEE---------TTTTEEEEECTTCSSCCSEEESBTTBC
T ss_pred cEEEEECCC----CeEEeccCCCccCCceEEEECCCCC-EEEEE---------CCCCEEEEEeCCCCeEEEEEecccCCC
Confidence 588888877 7776543211112456788999998 54432 345789999986652 33331100
Q ss_pred ---CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeE
Q 004475 82 ---DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (751)
Q Consensus 82 ---~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (751)
...+. ....++++|++..|+++... ....
T Consensus 136 g~~~~~~~-~P~~ia~~~~~g~lyv~d~~-----------------------------------------------~~~~ 167 (329)
T 3fvz_A 136 GSDQNHFC-QPTDVAVEPSTGAVFVSDGY-----------------------------------------------CNSR 167 (329)
T ss_dssp CCSTTCCS-SEEEEEECTTTCCEEEEECS-----------------------------------------------SCCE
T ss_pred CCCccccC-CCcEEEEeCCCCeEEEEeCC-----------------------------------------------CCCe
Confidence 01111 24578999944456655210 0146
Q ss_pred EEEEcCCCCce-ecCC----------C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce-eeeec
Q 004475 159 LVLGSLDGTAK-DFGT----------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELC 225 (751)
Q Consensus 159 l~~~~~~G~~~-~lt~----------~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~ 225 (751)
|++++.+|+.. .+.. . .....++++||+..|+++... ...|.+|+.++++ ...+.
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEEC
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEe
Confidence 67777766332 2211 1 236689999997778876433 3478899998443 33332
Q ss_pred cCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE---eeceeEE
Q 004475 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH---KLDLRFS 302 (751)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~---~~~~~~~ 302 (751)
... ....+..++++| | +++.... ...........+++++... +.....+. .......
T Consensus 236 ~~~-----------~~~~~~~~~~~p-g---~~~~~~g---~~~v~~~~~~~v~~~~~~~--g~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 236 HAS-----------FGRNVFAISYIP-G---FLFAVNG---KPYFGDQEPVQGFVMNFSS--GEIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp CTT-----------TTTCEEEEEEET-T---EEEEEEC---CCCTTCSCCCCEEEEETTT--CCEEEEECCSSSCCSSEE
T ss_pred ccc-----------cCCCcceeeecC-C---EEEEeCC---CEEeccCCCcEEEEEEcCC--CeEEEEEcCCCCccCCee
Confidence 111 112345788999 3 3343211 1111222334778887641 22222221 1112234
Q ss_pred -EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 303 -VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 303 -~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
++++||| .|+.+. ....+|+++++++
T Consensus 296 ~ia~~~dG-~lyvad---~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 296 DIVASEDG-TVYIGD---AHTNTVWKFTLTE 322 (329)
T ss_dssp EEEECTTS-EEEEEE---SSSCCEEEEEEEE
T ss_pred EEEECCCC-CEEEEE---CCCCEEEEEeCCc
Confidence 8899999 454433 2234677777655
No 474
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.28 E-value=0.00022 Score=71.63 Aligned_cols=209 Identities=12% Similarity=0.053 Sum_probs=106.2
Q ss_pred eEEEEEcCCCCceec-CCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475 157 AQLVLGSLDGTAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (751)
Q Consensus 157 ~~l~~~~~~G~~~~l-t~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 235 (751)
..|++++.+|+...+ ........++++|||+ |++...... ...++.++..+++.+.+...+.. .
T Consensus 53 ~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~-l~vad~~~~----------~~~v~~~d~~~g~~~~~~~~~~~-~--- 117 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWNAD----------SIPVVSLVKSDGTVETLLTLPDA-I--- 117 (306)
T ss_dssp TEEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEECTT----------SCEEEEEECTTSCEEEEEECTTC-S---
T ss_pred CeEEEECCCCceEEEEeCCCCceeEEEcCCCc-EEEEeccCC----------cceEEEEcCCCCeEEEEEeCCCc-c---
Confidence 478888887744333 2235667899999998 555432210 12477888777766655433211 0
Q ss_pred ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe--E------e--ec-eeEEEE
Q 004475 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL--H------K--LD-LRFSVS 304 (751)
Q Consensus 236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l--~------~--~~-~~~~~~ 304 (751)
....++..+++ . ++++.. ..+.||+++.+ ++..+.. . . .. .... .
T Consensus 118 -------~~~g~~~~~~~-~-~~v~d~-----------~~g~i~~~d~~---~~~~~v~~~~~~~~~~~~~~~~~~pn-g 173 (306)
T 2p4o_A 118 -------FLNGITPLSDT-Q-YLTADS-----------YRGAIWLIDVV---QPSGSIWLEHPMLARSNSESVFPAAN-G 173 (306)
T ss_dssp -------CEEEEEESSSS-E-EEEEET-----------TTTEEEEEETT---TTEEEEEEECGGGSCSSTTCCSCSEE-E
T ss_pred -------ccCcccccCCC-c-EEEEEC-----------CCCeEEEEeCC---CCcEeEEEECCccccccccCCCCcCC-C
Confidence 01123333433 3 444321 23577877763 2111110 0 0 01 1112 2
Q ss_pred EecCCceEEEeeeecccceeEEEecCCC-CCC-cceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPGS-KDV-APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 382 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 382 (751)
.+|||+.|+++.. ...+|++++.++ +.. ..+.+.... ..--+++++||+ |++...
T Consensus 174 is~dg~~lyv~d~---~~~~I~~~~~~~~g~~~~~~~~~~~~--------~P~gi~vd~dG~-l~va~~----------- 230 (306)
T 2p4o_A 174 LKRFGNFLYVSNT---EKMLLLRIPVDSTDKPGEPEIFVEQT--------NIDDFAFDVEGN-LYGATH----------- 230 (306)
T ss_dssp EEEETTEEEEEET---TTTEEEEEEBCTTSCBCCCEEEEESC--------CCSSEEEBTTCC-EEEECB-----------
T ss_pred cCcCCCEEEEEeC---CCCEEEEEEeCCCCCCCccEEEeccC--------CCCCeEECCCCC-EEEEeC-----------
Confidence 3899998877652 345788888765 211 112222111 111178899996 444331
Q ss_pred ccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeec---cCCCEEEEEEec
Q 004475 383 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN---LNQLKILTSKES 446 (751)
Q Consensus 383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~ 446 (751)
....|.+++.+ |+...+...... ...+..++|+ +|+++|+++...
T Consensus 231 ---------~~~~V~~~~~~-G~~~~~~~~~~~---------~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 ---------IYNSVVRIAPD-RSTTIIAQAEQG---------VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ---------TTCCEEEECTT-CCEEEEECGGGT---------CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ---------CCCeEEEECCC-CCEEEEeecccc---------cCCceEEEEecccCCCCEEEEECCC
Confidence 12368888875 655444222110 1112235777 788888887643
No 475
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.27 E-value=0.00085 Score=66.78 Aligned_cols=272 Identities=12% Similarity=0.023 Sum_probs=146.1
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
......++|||+ |.++. .....|.+++.+ ++.+.+..... ......++++++|+ |++....
T Consensus 21 ~p~~i~~d~~g~-l~v~~---------~~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~-l~v~~~~---- 81 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWFTQ---------HKANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGD-IWFTENG---- 81 (300)
T ss_dssp CEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC-EEEEETT----
T ss_pred CcceeeECCCCC-EEEEc---------CCCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCC-EEEEecC----
Confidence 456778999997 33321 344688899987 66554422111 01356778889997 5544210
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCceecCC--C-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~~lt~--~-~~~~~~~~SpDG~~ 188 (751)
...|++++.+|+.+.+.. . .....++++++|+
T Consensus 82 --------------------------------------------~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~- 116 (300)
T 2qc5_A 82 --------------------------------------------ANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGD- 116 (300)
T ss_dssp --------------------------------------------TTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTC-
T ss_pred --------------------------------------------CCeEEEECCCCCeEEecCCCCCCCCccceECCCCC-
Confidence 136788887775544322 2 4567888999997
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++.... ...|++++.+ ++...+. .+. ....+..+.++++|+ ++++..
T Consensus 117 l~v~~~~------------~~~i~~~~~~-g~~~~~~-~~~----------~~~~~~~i~~d~~g~--l~v~~~------ 164 (300)
T 2qc5_A 117 IWFTQLN------------GDRIGKLTAD-GTIYEYD-LPN----------KGSYPAFITLGSDNA--LWFTEN------ 164 (300)
T ss_dssp EEEEETT------------TTEEEEECTT-SCEEEEE-CSS----------TTCCEEEEEECTTSS--EEEEET------
T ss_pred EEEEccC------------CCeEEEECCC-CCEEEcc-CCC----------CCCCceeEEECCCCC--EEEEec------
Confidence 5554322 2358888887 4343321 110 112345789999997 455431
Q ss_pred ccccCcccceeeccCCCCCCCCceEeEe--eceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec-c
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-V 344 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-~ 344 (751)
..+.|++++.+ + ....+.. ...... +.++++|+ |+++.. ....|++++.++ ........ .
T Consensus 165 -----~~~~i~~~~~~---g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~~g---~~~~~~~~~~ 228 (300)
T 2qc5_A 165 -----QNNSIGRITNT---G-KLEEYPLPTNAAAPVGITSGNDGA-LWFVEI---MGNKIGRITTTG---EISEYDIPTP 228 (300)
T ss_dssp -----TTTEEEEECTT---C-CEEEEECSSTTCCEEEEEECTTSS-EEEEET---TTTEEEEECTTC---CEEEEECSST
T ss_pred -----CCCeEEEECCC---C-cEEEeeCCCCCCCcceEEECCCCC-EEEEcc---CCCEEEEEcCCC---cEEEEECCCC
Confidence 12467777763 2 2222221 112334 78889886 544431 234688888843 22222111 1
Q ss_pred cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeee
Q 004475 345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 424 (751)
Q Consensus 345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 424 (751)
..... .++++++|+ |++... ....|.+++. +++...+.....
T Consensus 229 ~~~~~------~i~~d~~g~-l~v~~~--------------------~~~~i~~~~~-~g~~~~~~~~~~---------- 270 (300)
T 2qc5_A 229 NARPH------AITAGKNSE-IWFTEW--------------------GANQIGRITN-DNTIQEYQLQTE---------- 270 (300)
T ss_dssp TCCEE------EEEECSTTC-EEEEET--------------------TTTEEEEECT-TSCEEEEECCST----------
T ss_pred CCCce------EEEECCCCC-EEEecc--------------------CCCeEEEECC-CCcEEEEECCcc----------
Confidence 11111 167888887 544441 1236888888 455443321111
Q ss_pred ecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 425 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 425 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
......+.++++|+ |++.. . . .|+++++.
T Consensus 271 ~~~~~~i~~~~~g~-l~v~~-~---~-~i~~~~p~ 299 (300)
T 2qc5_A 271 NAEPHGITFGKDGS-VWFAL-K---C-KIGKLNLN 299 (300)
T ss_dssp TCCCCCEEECTTSC-EEEEC-S---S-EEEEEEEC
T ss_pred CCccceeEeCCCCC-EEEEc-c---C-ceEEeCCC
Confidence 11133467788886 44432 2 2 67777753
No 476
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.25 E-value=1.4e-06 Score=86.74 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=44.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcee---E
Q 004475 555 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFC---C 628 (751)
Q Consensus 555 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~---~ 628 (751)
+.|++++. .+. ..........+++.+.++.+ . ...++.++||||||.+|+.+|.+. |+++. +
T Consensus 49 ~~v~~~d~---~~~----~~~~~~~~~a~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~ 116 (283)
T 3tjm_A 49 IPTYGLQC---TRA----APLDSIHSLAAYYIDCIRQV---Q--PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 116 (283)
T ss_dssp SCEEEECC---CTT----SCCSCHHHHHHHHHHHHTTT---C--CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred ceEEEEec---CCC----CCCCCHHHHHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccce
Confidence 78888444 221 11223445555444444322 1 125799999999999999999865 77788 8
Q ss_pred EEEccCC
Q 004475 629 GIARSGS 635 (751)
Q Consensus 629 ~v~~~~~ 635 (751)
++++++.
T Consensus 117 lvlid~~ 123 (283)
T 3tjm_A 117 LFLFDGS 123 (283)
T ss_dssp EEEESCC
T ss_pred EEEEcCC
Confidence 8888764
No 477
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.23 E-value=0.00026 Score=71.15 Aligned_cols=244 Identities=13% Similarity=0.092 Sum_probs=124.8
Q ss_pred cccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcE
Q 004475 21 EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTL 100 (751)
Q Consensus 21 ~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~ 100 (751)
.+.+.+++.+.....++|+|||+ |+++. .....|++++.+++..+.+ .... ....++++|||+
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~-lyv~d---------~~~~~I~~~d~~g~~~~~~-~~~~-----~p~gia~~~dG~- 84 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGT-IFVTN---------HEVGEIVSITPDGNQQIHA-TVEG-----KVSGLAFTSNGD- 84 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSC-EEEEE---------TTTTEEEEECTTCCEEEEE-ECSS-----EEEEEEECTTSC-
T ss_pred ceEeEeCCCCCCcceEEECCCCC-EEEEe---------CCCCeEEEECCCCceEEEE-eCCC-----CceeEEEcCCCc-
Confidence 34444455444556789999997 65542 2457899999876533332 2222 246789999998
Q ss_pred EEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC---ce
Q 004475 101 LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP---AV 176 (751)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~---~~ 176 (751)
|++...... ...|+.++. +|+.+.+... ..
T Consensus 85 l~vad~~~~----------------------------------------------~~~v~~~d~~~g~~~~~~~~~~~~~ 118 (306)
T 2p4o_A 85 LVATGWNAD----------------------------------------------SIPVVSLVKSDGTVETLLTLPDAIF 118 (306)
T ss_dssp EEEEEECTT----------------------------------------------SCEEEEEECTTSCEEEEEECTTCSC
T ss_pred EEEEeccCC----------------------------------------------cceEEEEcCCCCeEEEEEeCCCccc
Confidence 555421100 025777776 6765544321 22
Q ss_pred EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeee-ccCCCCCCCCCccCCccCCCceeeeecCCCc
Q 004475 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (751)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~ 255 (751)
...++..+++ .+++.... ...||++|.+++..+.. ....+....+ ...-.....+ +|||++
T Consensus 119 ~~g~~~~~~~-~~~v~d~~------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~---~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 119 LNGITPLSDT-QYLTADSY------------RGAIWLIDVVQPSGSIWLEHPMLARSNS---ESVFPAANGL--KRFGNF 180 (306)
T ss_dssp EEEEEESSSS-EEEEEETT------------TTEEEEEETTTTEEEEEEECGGGSCSST---TCCSCSEEEE--EEETTE
T ss_pred cCcccccCCC-cEEEEECC------------CCeEEEEeCCCCcEeEEEECCccccccc---cCCCCcCCCc--CcCCCE
Confidence 2334444454 45443211 34789999876432211 0000000000 0000122344 999988
Q ss_pred eEEEEEeccCCCCccccCcccceeeccCCCCCCC--CceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
||++.. ....|++++++. ++. ....+... .... +++++||+ | |.++. ....|.+++.++
T Consensus 181 -lyv~d~-----------~~~~I~~~~~~~-~g~~~~~~~~~~~-~~P~gi~vd~dG~-l-~va~~--~~~~V~~~~~~G 242 (306)
T 2p4o_A 181 -LYVSNT-----------EKMLLLRIPVDS-TDKPGEPEIFVEQ-TNIDDFAFDVEGN-L-YGATH--IYNSVVRIAPDR 242 (306)
T ss_dssp -EEEEET-----------TTTEEEEEEBCT-TSCBCCCEEEEES-CCCSSEEEBTTCC-E-EEECB--TTCCEEEECTTC
T ss_pred -EEEEeC-----------CCCEEEEEEeCC-CCCCCccEEEecc-CCCCCeEECCCCC-E-EEEeC--CCCeEEEECCCC
Confidence 777541 235788888752 111 12222222 2223 78999996 4 33322 235788898865
Q ss_pred CCCcceeeeecccccccCCCCCCCeeeC---CCCCEEEEee
Q 004475 333 KDVAPRVLFDRVFENVYSDPGSPMMTRT---STGTNVIAKI 370 (751)
Q Consensus 333 ~~~~~~~l~~~~~~~~~~~~~~~~~~~s---pDG~~l~~~~ 370 (751)
. ...+....... .....++|+ ||++.|++..
T Consensus 243 ~---~~~~~~~~~~~----~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 243 S---TTIIAQAEQGV----IGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp C---EEEEECGGGTC----TTEEEEEECCSTTTTTEEEEEE
T ss_pred C---EEEEeeccccc----CCceEEEEecccCCCCEEEEEC
Confidence 2 12221111100 001116788 8998888877
No 478
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.00047 Score=72.73 Aligned_cols=158 Identities=11% Similarity=0.136 Sum_probs=96.8
Q ss_pred ccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 33 ~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
....+++| ++..|+++. .. ..|++++++++..+.+..... ....++|+++|++|+++.......
T Consensus 139 P~~lavdp~~~g~Lyv~d---------~~-~~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVG---------EQ-HPTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCEEEEETTEEEEEEEEE---------BT-EEEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCEEEECCCCCCeEEEEe---------CC-CcEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeCCCCcc
Confidence 45678999 566766642 12 789999998887766644222 246789999999888874321110
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCc---eecCCCceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~---~~lt~~~~~~~~~~SpDG~~ 188 (751)
...++.++.+|.. +.+........++++|++.+
T Consensus 204 --------------------------------------------~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 204 --------------------------------------------RPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp --------------------------------------------SEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred --------------------------------------------cceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 0234445554422 22222234457889996667
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|+++... ...|++++.+++....+..... ....+.++|+|||++ |+++..
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~-----------~~~P~gia~~pdG~~-lyv~d~------ 289 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQD-----------SGWEFHIQFHPSGNY-AYIVVV------ 289 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSS-----------SSCCEEEEECTTSSE-EEEEET------
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCC-----------CCcceeEEEcCCCCE-EEEEEC------
Confidence 8776433 3479999998876544322211 123458999999998 677541
Q ss_pred ccccCcccceeeccCC
Q 004475 269 NVEVSPRDIIYTQPAE 284 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~ 284 (751)
....|++++.+
T Consensus 290 -----~~~~I~~~~~d 300 (430)
T 3tc9_A 290 -----NQHYILRSDYD 300 (430)
T ss_dssp -----TTTEEEEEEEE
T ss_pred -----CCCEEEEEeCC
Confidence 22467776654
No 479
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.11 E-value=0.00029 Score=68.06 Aligned_cols=212 Identities=8% Similarity=-0.026 Sum_probs=115.2
Q ss_pred EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCce
Q 004475 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (751)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~ 256 (751)
.+.+.|+||| +|+++.... ..+.|.++|+.+++...-...+. ......+.++|++
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~----------~~s~v~~iD~~tg~v~~~i~l~~-------------~~fgeGi~~~g~~- 77 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLY----------GRSSVRQVALQTGKVENIHKMDD-------------SYFGEGLTLLNEK- 77 (266)
T ss_dssp EEEEEECSTT-EEEEEECST----------TTCEEEEEETTTCCEEEEEECCT-------------TCCEEEEEEETTE-
T ss_pred cccEEEeCCC-eEEEECCCC----------CCCEEEEEECCCCCEEEEEecCC-------------CcceEEEEEeCCE-
Confidence 4678899996 677654321 13579999999876543322111 1112245556777
Q ss_pred EEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCCc
Q 004475 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 336 (751)
Q Consensus 257 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 336 (751)
|+.+. ...+.++++|.+. ......+... .......++||++|+.+. +...|+.+|+.+. ..
T Consensus 78 lyv~t-----------~~~~~v~viD~~t--~~v~~~i~~g-~~~g~glt~Dg~~l~vs~----gs~~l~viD~~t~-~v 138 (266)
T 2iwa_A 78 LYQVV-----------WLKNIGFIYDRRT--LSNIKNFTHQ-MKDGWGLATDGKILYGSD----GTSILYEIDPHTF-KL 138 (266)
T ss_dssp EEEEE-----------TTCSEEEEEETTT--TEEEEEEECC-SSSCCEEEECSSSEEEEC----SSSEEEEECTTTC-CE
T ss_pred EEEEE-----------ecCCEEEEEECCC--CcEEEEEECC-CCCeEEEEECCCEEEEEC----CCCeEEEEECCCC-cE
Confidence 66654 1336899999751 1122223222 011145788999887543 2468999999885 22
Q ss_pred ceeeeecc-cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccch
Q 004475 337 PRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 415 (751)
Q Consensus 337 ~~~l~~~~-~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 415 (751)
...+.-.. ...+. ....+.|. || .|+...+ ....|.++|.++++....+...+-
T Consensus 139 ~~~I~Vg~~~~p~~---~~nele~~-dg-~lyvn~~--------------------~~~~V~vID~~tg~V~~~I~~~g~ 193 (266)
T 2iwa_A 139 IKKHNVKYNGHRVI---RLNELEYI-NG-EVWANIW--------------------QTDCIARISAKDGTLLGWILLPNL 193 (266)
T ss_dssp EEEEECEETTEECC---CEEEEEEE-TT-EEEEEET--------------------TSSEEEEEETTTCCEEEEEECHHH
T ss_pred EEEEEECCCCcccc---cceeEEEE-CC-EEEEecC--------------------CCCeEEEEECCCCcEEEEEECCCc
Confidence 22222111 01000 00014566 66 4554441 234799999999988666553210
Q ss_pred -hh-hhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475 416 -KY-FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 460 (751)
Q Consensus 416 -~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~ 460 (751)
.. ...........+.++++|++++++++... -+.++++++..
T Consensus 194 ~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---~~~v~~i~l~~ 237 (266)
T 2iwa_A 194 RKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---WPKLFEIKLHL 237 (266)
T ss_dssp HHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---CSEEEEEEEEE
T ss_pred ccccccccccccCceEEEEEcCCCCEEEEECCC---CCeEEEEEEec
Confidence 00 00000001123458999999999888644 35688888654
No 480
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.08 E-value=0.00084 Score=66.48 Aligned_cols=118 Identities=14% Similarity=0.203 Sum_probs=69.1
Q ss_pred eEEEEEcCCCCc-eecC--CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC
Q 004475 157 AQLVLGSLDGTA-KDFG--TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (751)
Q Consensus 157 ~~l~~~~~~G~~-~~lt--~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 232 (751)
..|++++.+|+. ..+. .. .....++++|||+ |+++... ...|++|+.++.....+... +.
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~-g~-- 205 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIGGE-GI-- 205 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEESCT-TT--
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC------------CCEEEEEcCCCCEEEEEccC-Cc--
Confidence 467888887743 3332 12 4567899999998 5554322 34688999877655544221 10
Q ss_pred CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCccc-ceeeccCCCCCCCCceEeEeece--eEE-EEEecC
Q 004475 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILHKLDL--RFS-VSWCDD 308 (751)
Q Consensus 233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~l~~~~~--~~~-~~~spd 308 (751)
...+..++++|||+ ++++.. ..+ .|.+++.+ +.....+..... ... ++++||
T Consensus 206 --------~~~p~~i~~d~~G~--l~v~~~-----------~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 206 --------TNYPIGVGINSNGE--ILIADN-----------HNNFNLTIFTQD---GQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp --------SCSEEEEEECTTCC--EEEEEC-----------SSSCEEEEECTT---SCEEEEEEESSCCSCEEEEEEETT
T ss_pred --------cCCCcEEEECCCCC--EEEEeC-----------CCCEEEEEECCC---CCEEEEEcccCCCCcceeEEECCC
Confidence 02345789999996 455431 122 68888764 433344433221 244 889999
Q ss_pred CceEEEe
Q 004475 309 SLALVNE 315 (751)
Q Consensus 309 g~~l~~~ 315 (751)
|+ |+++
T Consensus 262 g~-l~vs 267 (286)
T 1q7f_A 262 GS-VVLA 267 (286)
T ss_dssp TE-EEEE
T ss_pred Cc-EEEE
Confidence 97 4444
No 481
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.06 E-value=0.0015 Score=64.84 Aligned_cols=192 Identities=14% Similarity=0.106 Sum_probs=107.6
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.....+++|||+ |.++. .....|++++.+ ++.+.+..... ......++++|||+ |++....
T Consensus 58 ~~~~i~~~~~g~-l~v~~---------~~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g~-l~v~~~~---- 118 (299)
T 2z2n_A 58 KVMCLTISSDGE-VWFTE---------NAANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNGD-IWFTEMN---- 118 (299)
T ss_dssp CEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC-EEEEETT----
T ss_pred ceeeEEECCCCC-EEEeC---------CCCCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCCC-EEEEecC----
Confidence 456778899986 33332 234678888876 44444431111 01246778889986 5554211
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCceecCC--C-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~~lt~--~-~~~~~~~~SpDG~~ 188 (751)
...|++++.+|+...+.. . .....++++|||+
T Consensus 119 --------------------------------------------~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~- 153 (299)
T 2z2n_A 119 --------------------------------------------GNRIGRITDDGKIREYELPNKGSYPSFITLGSDNA- 153 (299)
T ss_dssp --------------------------------------------TTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-
T ss_pred --------------------------------------------CceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-
Confidence 046788888775544322 2 4567889999995
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++.... ...|++++. +++...+. .+. ....+..+.++++|+ ++++..
T Consensus 154 l~v~~~~------------~~~i~~~~~-~g~~~~~~-~~~----------~~~~~~~i~~~~~g~--l~v~~~------ 201 (299)
T 2z2n_A 154 LWFTENQ------------NNAIGRITE-SGDITEFK-IPT----------PASGPVGITKGNDDA--LWFVEI------ 201 (299)
T ss_dssp EEEEETT------------TTEEEEECT-TCCEEEEE-CSS----------TTCCEEEEEECTTSS--EEEEET------
T ss_pred EEEEeCC------------CCEEEEEcC-CCcEEEee-CCC----------CCCcceeEEECCCCC--EEEEcc------
Confidence 5554322 246888988 44444321 110 112345789999987 455431
Q ss_pred ccccCcccceeeccCCCCCCCCceEeEe--eceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
..+.|++++.. + ....+.. ...... +.++++|+ |+++. .....|++++.++
T Consensus 202 -----~~~~i~~~~~~---g-~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~---~~~~~i~~~d~~g 255 (299)
T 2z2n_A 202 -----IGNKIGRITTS---G-EITEFKIPTPNARPHAITAGAGID-LWFTE---WGANKIGRLTSNN 255 (299)
T ss_dssp -----TTTEEEEECTT---C-CEEEEECSSTTCCEEEEEECSTTC-EEEEE---TTTTEEEEEETTT
T ss_pred -----CCceEEEECCC---C-cEEEEECCCCCCCceeEEECCCCC-EEEec---cCCceEEEECCCC
Confidence 12467777762 3 2222211 123344 78899988 54443 1234788888843
No 482
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.05 E-value=0.00062 Score=67.04 Aligned_cols=82 Identities=10% Similarity=-0.071 Sum_probs=53.1
Q ss_pred CcceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (751)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~ 82 (751)
....|+++|..+ |+...-...........+.++|||+.|+. . ...|+.++.++....++.....
T Consensus 13 ~~~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-----------~~~V~~~d~~G~~~W~~~~~~~ 76 (276)
T 3no2_A 13 GWNKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILFS-Y-----------SKGAKMITRDGRELWNIAAPAG 76 (276)
T ss_dssp TCSEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEEE-C-----------BSEEEEECTTSCEEEEEECCTT
T ss_pred CCCEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEEe-C-----------CCCEEEECCCCCEEEEEcCCCC
Confidence 456789999977 88875443322224778899999986662 1 2468888884333444433211
Q ss_pred ccccceeeeeEEecCCcEEEEe
Q 004475 83 ICLNAVFGSFVWVNNSTLLIFT 104 (751)
Q Consensus 83 ~~~~~~~~~~~wspDg~~l~~~ 104 (751)
. .+..+.++|||+.|+..
T Consensus 77 ~----~~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 77 C----EMQTARILPDGNALVAW 94 (276)
T ss_dssp C----EEEEEEECTTSCEEEEE
T ss_pred c----cccccEECCCCCEEEEe
Confidence 1 25577899999987765
No 483
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.03 E-value=0.00077 Score=65.07 Aligned_cols=165 Identities=5% Similarity=-0.058 Sum_probs=88.9
Q ss_pred eEEEEEcC-CCCce-ecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCC
Q 004475 157 AQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDI 233 (751)
Q Consensus 157 ~~l~~~~~-~G~~~-~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~ 233 (751)
+.|..+|+ +|+.. .+.-+.......++++|++|++.... ...++++|+++.+.. ++... .
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~------------~~~v~viD~~t~~v~~~i~~g-----~ 106 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL------------KNIGFIYDRRTLSNIKNFTHQ-----M 106 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT------------CSEEEEEETTTTEEEEEEECC-----S
T ss_pred CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec------------CCEEEEEECCCCcEEEEEECC-----C
Confidence 58999999 78543 22212212222344457788877432 457999999876543 33111 0
Q ss_pred CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec--e---eEE-EEEec
Q 004475 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--L---RFS-VSWCD 307 (751)
Q Consensus 234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~---~~~-~~~sp 307 (751)
...+..++||++ ++.+. ..+.|+++|.+. ......+.-.. . ... +.|.
T Consensus 107 ----------~~g~glt~Dg~~-l~vs~------------gs~~l~viD~~t--~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 107 ----------KDGWGLATDGKI-LYGSD------------GTSILYEIDPHT--FKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp ----------SSCCEEEECSSS-EEEEC------------SSSEEEEECTTT--CCEEEEEECEETTEECCCEEEEEEE-
T ss_pred ----------CCeEEEEECCCE-EEEEC------------CCCeEEEEECCC--CcEEEEEEECCCCcccccceeEEEE-
Confidence 113578889998 66542 235899998752 12233333221 1 233 6777
Q ss_pred CCceEEEeeeecccceeEEEecCCCCCCcceeeeecc-c--c---cc-cCCCCCCCeeeCCCCCEEEEee
Q 004475 308 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-F--E---NV-YSDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 308 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~--~---~~-~~~~~~~~~~~spDG~~l~~~~ 370 (751)
|| .|+ .... ....|.++|+.++ +........ . . .. ........++|+|||+.|+...
T Consensus 161 dg-~ly-vn~~--~~~~V~vID~~tg--~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 161 NG-EVW-ANIW--QTDCIARISAKDG--TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TT-EEE-EEET--TSSEEEEEETTTC--CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CC-EEE-EecC--CCCeEEEEECCCC--cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 77 454 3322 2358999999886 222222211 0 0 00 0000011278999999888777
No 484
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.99 E-value=0.0035 Score=62.23 Aligned_cols=192 Identities=16% Similarity=0.108 Sum_probs=108.8
Q ss_pred cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (751)
Q Consensus 32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 111 (751)
.....+++|||+ |+++. .....|++++.+ ++.+.+...... .....++.+|+|+ |++....
T Consensus 63 ~~~~i~~~~~g~-l~v~~---------~~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~-l~v~~~~---- 123 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTE---------NGANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGD-IWFTQLN---- 123 (300)
T ss_dssp CEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTC-EEEEETT----
T ss_pred cceeEEECCCCC-EEEEe---------cCCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCC-EEEEccC----
Confidence 456677889886 43332 334678899887 665544321111 1246778888886 4444211
Q ss_pred CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCceec--CCC-ceEEeeeeCCCCce
Q 004475 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDF--GTP-AVYTAVEPSPDQKY 188 (751)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~~l--t~~-~~~~~~~~SpDG~~ 188 (751)
...|+.++.+|+...+ ... .....+++++||+
T Consensus 124 --------------------------------------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~- 158 (300)
T 2qc5_A 124 --------------------------------------------GDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA- 158 (300)
T ss_dssp --------------------------------------------TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-
T ss_pred --------------------------------------------CCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-
Confidence 1467888887755433 212 5567889999998
Q ss_pred EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (751)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~ 268 (751)
|++.... ...|++++.++. ...+. .+. ....+..+.++++|+ |+++..
T Consensus 159 l~v~~~~------------~~~i~~~~~~g~-~~~~~-~~~----------~~~~~~~i~~d~~g~--l~v~~~------ 206 (300)
T 2qc5_A 159 LWFTENQ------------NNSIGRITNTGK-LEEYP-LPT----------NAAAPVGITSGNDGA--LWFVEI------ 206 (300)
T ss_dssp EEEEETT------------TTEEEEECTTCC-EEEEE-CSS----------TTCCEEEEEECTTSS--EEEEET------
T ss_pred EEEEecC------------CCeEEEECCCCc-EEEee-CCC----------CCCCcceEEECCCCC--EEEEcc------
Confidence 6665432 235888888433 33321 111 112345788999985 555431
Q ss_pred ccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
..+.|++++.+ + ...... ....... +.++++|+ |+++.. ....|++++.++
T Consensus 207 -----~~~~i~~~~~~---g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~~g 260 (300)
T 2qc5_A 207 -----MGNKIGRITTT---G-EISEYDIPTPNARPHAITAGKNSE-IWFTEW---GANQIGRITNDN 260 (300)
T ss_dssp -----TTTEEEEECTT---C-CEEEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEECTTS
T ss_pred -----CCCEEEEEcCC---C-cEEEEECCCCCCCceEEEECCCCC-EEEecc---CCCeEEEECCCC
Confidence 12467777763 2 222221 1122344 78899988 554441 235788888844
No 485
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.97 E-value=3.4e-05 Score=79.02 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=31.1
Q ss_pred CCcEEEEEeChHHHHHHHHHHh-------------------CC------CceeEEEEccCCC
Q 004475 600 PSRIAVGGHSYGAFMTAHLLAH-------------------AP------HLFCCGIARSGSY 636 (751)
Q Consensus 600 ~~~i~l~G~S~GG~~a~~~a~~-------------------~p------~~~~~~v~~~~~~ 636 (751)
..++.|+||||||.++..++.+ +| ++++.+|++++..
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 4689999999999999999872 35 6899999988753
No 486
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.97 E-value=0.0033 Score=63.44 Aligned_cols=147 Identities=14% Similarity=0.015 Sum_probs=79.7
Q ss_pred EEEEEcCC-CCceecCCC------ceEEeeeeCC-CCceEEEEEecCCccc-----ccccCCCceeEEEEeCCCceeeee
Q 004475 158 QLVLGSLD-GTAKDFGTP------AVYTAVEPSP-DQKYVLITSMHRPYSY-----KVPCARFSQKVQVWTTDGKLVREL 224 (751)
Q Consensus 158 ~l~~~~~~-G~~~~lt~~------~~~~~~~~Sp-DG~~i~~~~~~~~~~~-----~~~~~~~~~~l~~~d~~~~~~~~l 224 (751)
.|++++.+ |+.+.+... .....+++.| ||+ |+++........ ..........|++++.++++.+.+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 36777774 444444221 2345789999 885 666543211000 000011235799999987765543
Q ss_pred ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-E
Q 004475 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-V 303 (751)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~ 303 (751)
... ......++|+|||+. |+++.. ....|++++++....+..+.+....+ .. +
T Consensus 181 ~~~-------------~~~p~gia~~~dg~~-lyv~d~-----------~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi 234 (322)
T 2fp8_A 181 LKE-------------LHVPGGAEVSADSSF-VLVAEF-----------LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI 234 (322)
T ss_dssp EEE-------------ESCCCEEEECTTSSE-EEEEEG-----------GGTEEEEEESSSTTTTCEEEEEECSS-EEEE
T ss_pred ccC-------------CccCcceEECCCCCE-EEEEeC-----------CCCeEEEEECCCCcCCccceEEeCCC-CCCe
Confidence 211 012347899999997 676542 23578888875211122333333333 44 8
Q ss_pred EEecCCceEEEeeeec-------ccceeEEEecCCC
Q 004475 304 SWCDDSLALVNETWYK-------TSQTRTWLVCPGS 332 (751)
Q Consensus 304 ~~spdg~~l~~~~~~~-------~~~~~l~~~~~~~ 332 (751)
.++++|+ |+.+.... .....|++++.++
T Consensus 235 ~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 235 KRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred EECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 8899997 44443220 1135788888865
No 487
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.95 E-value=4.2e-05 Score=79.65 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=31.9
Q ss_pred CcEEEEEeChHHHHHHHHHHh--------------------------CCCceeEEEEccCCC
Q 004475 601 SRIAVGGHSYGAFMTAHLLAH--------------------------APHLFCCGIARSGSY 636 (751)
Q Consensus 601 ~~i~l~G~S~GG~~a~~~a~~--------------------------~p~~~~~~v~~~~~~ 636 (751)
.++.|+||||||.+|..++.. +|+++.++|++++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPH 212 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCC
Confidence 689999999999999998876 688999999998764
No 488
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.89 E-value=0.0012 Score=62.99 Aligned_cols=205 Identities=8% Similarity=-0.033 Sum_probs=112.6
Q ss_pred EEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCce
Q 004475 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (751)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~ 256 (751)
.+.+.|+ || .|+.+..... .+.|.++|+++++...-...+. ........++|++
T Consensus 45 tqGL~~~-~~-~LyestG~~g----------~S~v~~vD~~Tgkv~~~~~l~~-------------~~FgeGit~~g~~- 98 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNG----------RSSIRKVDIESGKTLQQIELGK-------------RYFGEGISDWKDK- 98 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETT----------EEEEEEECTTTCCEEEEEECCT-------------TCCEEEEEEETTE-
T ss_pred cceEEEE-CC-EEEEECCCCC----------CceEEEEECCCCcEEEEEecCC-------------ccceeEEEEeCCE-
Confidence 4578888 65 6666543321 3578899999876543322211 1123345667887
Q ss_pred EEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCC
Q 004475 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV 335 (751)
Q Consensus 257 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~ 335 (751)
|+.+. +..+.++++|.+. ......+.-. .. ...++||+.|+.+. +...|+.+|+.+. .
T Consensus 99 ly~lt-----------w~~~~v~v~D~~t--~~~~~ti~~~---~eG~glt~dg~~L~~Sd----Gs~~i~~iDp~T~-~ 157 (262)
T 3nol_A 99 IVGLT-----------WKNGLGFVWNIRN--LRQVRSFNYD---GEGWGLTHNDQYLIMSD----GTPVLRFLDPESL-T 157 (262)
T ss_dssp EEEEE-----------SSSSEEEEEETTT--CCEEEEEECS---SCCCCEEECSSCEEECC----SSSEEEEECTTTC-S
T ss_pred EEEEE-----------eeCCEEEEEECcc--CcEEEEEECC---CCceEEecCCCEEEEEC----CCCeEEEEcCCCC-e
Confidence 66643 1336899999852 1222222221 12 35568898877654 2468999999885 1
Q ss_pred cceeeeec-ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccc
Q 004475 336 APRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 414 (751)
Q Consensus 336 ~~~~l~~~-~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 414 (751)
....+.-. ....+. ..+.+.|. ||+ |+...+ ....|.++|.++|+....+...+
T Consensus 158 v~~~I~V~~~g~~~~---~lNELe~~-~G~-lyan~w--------------------~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 158 PVRTITVTAHGEELP---ELNELEWV-DGE-IFANVW--------------------QTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp EEEEEECEETTEECC---CEEEEEEE-TTE-EEEEET--------------------TSSEEEEECTTTCBEEEEEECTT
T ss_pred EEEEEEeccCCcccc---ccceeEEE-CCE-EEEEEc--------------------cCCeEEEEECCCCcEEEEEECCc
Confidence 11222111 001100 00014455 674 555442 23479999999999877766532
Q ss_pred hhhhhce---eeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475 415 EKYFETA---VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 458 (751)
Q Consensus 415 ~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~ 458 (751)
..... .......+.++++|++++|+++...+. .+|.+.+
T Consensus 213 --L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp---~~~ev~~ 254 (262)
T 3nol_A 213 --ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP---KVFEITL 254 (262)
T ss_dssp --GGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS---EEEEEEE
T ss_pred --CccccccccCcCCceEEEEEcCCCCEEEEECCCCC---ceEEEEE
Confidence 11000 011122356899999999999876654 4565544
No 489
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.86 E-value=0.0036 Score=59.95 Aligned_cols=180 Identities=9% Similarity=0.076 Sum_probs=91.2
Q ss_pred eEEEEEcCCCCc-eecC-CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce-eeeeccCCCCCC
Q 004475 157 AQLVLGSLDGTA-KDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAED 232 (751)
Q Consensus 157 ~~l~~~~~~G~~-~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~ 232 (751)
..|+.+|++|+. +++. .. .+...+++.++|++ +++... ...+++++++... ...+......
T Consensus 49 ~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~-~vs~E~------------~~~l~~~~v~~~~~i~~~~~~~~~-- 113 (255)
T 3qqz_A 49 AAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQF-VISDER------------DYAIYVISLTPNSEVKILKKIKIP-- 113 (255)
T ss_dssp EEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEE-EEEETT------------TTEEEEEEECTTCCEEEEEEEECC--
T ss_pred CeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEE-EEEECC------------CCcEEEEEcCCCCeeeeeeeeccc--
Confidence 589999998843 3332 22 67888999999964 343222 2457777665322 1211111100
Q ss_pred CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-------eceeEE-EE
Q 004475 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------LDLRFS-VS 304 (751)
Q Consensus 233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~~~-~~ 304 (751)
......+.+.-+++|+|++++ ++.+...+ ...||.++-- ..+...+.+.. .-...+ ++
T Consensus 114 --~~~~~~N~g~EGLA~d~~~~~-L~va~E~~----------p~~i~~~~g~-~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 114 --LQESPTNCGFEGLAYSRQDHT-FWFFKEKN----------PIEVYKVNGL-LSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp --CSSCCCSSCCEEEEEETTTTE-EEEEEESS----------SEEEEEEEST-TCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred --cccccccCCcceEEEeCCCCE-EEEEECcC----------CceEEEEccc-ccCCceeeecchhhccccccCCceeEE
Confidence 000112344568999999998 55544221 1256666510 00112222211 112345 88
Q ss_pred EecCCceEEEeeeecccceeEEEecCCCCCCcceeeeeccccccc-CCCCCCCeeeCCCCCEEEEee
Q 004475 305 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY-SDPGSPMMTRTSTGTNVIAKI 370 (751)
Q Consensus 305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~spDG~~l~~~~ 370 (751)
+.|....|+..+. ....|..+|.++.......|.. ...... ..+..--+++.++|+ |+..+
T Consensus 180 ~dp~tg~lliLS~---~s~~L~~~d~~g~~~~~~~L~~-g~~~l~~~~~qpEGia~d~~G~-lyIvs 241 (255)
T 3qqz_A 180 FNQQKNTLLVLSH---ESRALQEVTLVGEVIGEMSLTK-GSRGLSHNIKQAEGVAMDASGN-IYIVS 241 (255)
T ss_dssp EETTTTEEEEEET---TTTEEEEECTTCCEEEEEECST-TGGGCSSCCCSEEEEEECTTCC-EEEEE
T ss_pred EcCCCCeEEEEEC---CCCeEEEEcCCCCEEEEEEcCC-ccCCcccccCCCCeeEECCCCC-EEEEc
Confidence 8898888777662 3457888998873111111221 111110 011111278999996 55555
No 490
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.78 E-value=0.0052 Score=58.89 Aligned_cols=214 Identities=9% Similarity=0.043 Sum_probs=114.7
Q ss_pred ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (751)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~ 254 (751)
..+..++|.||++.|+...+. ...|+.+|++++..+.+.- .+. ...-++++.++|.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~g~v~~~i~l-~g~-----------~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------------PAAIVEMTTNGDLIRTIPL-DFV-----------KDLETIEYIGDNQ 82 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------------TEEEEEEETTCCEEEEEEC-SSC-----------SSEEEEEECSTTE
T ss_pred cCcceeEEeCCCCEEEEEECC------------CCeEEEEeCCCCEEEEEec-CCC-----------CChHHeEEeCCCE
Confidence 568899999999988887655 4579999999665555421 111 1122678887775
Q ss_pred ceEEEEEeccCCCCccccCcccceeeccCCCCCCC--CceEeE------eeceeEE-EEEecCCceEEEeeeecccceeE
Q 004475 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEILH------KLDLRFS-VSWCDDSLALVNETWYKTSQTRT 325 (751)
Q Consensus 255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~------~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l 325 (751)
. ++++ + .+..|+++++... +. ....+. ..+..+. ++|+|++++|+....+. ...|
T Consensus 83 ~--~vs~-E----------~~~~l~~~~v~~~-~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i 146 (255)
T 3qqz_A 83 F--VISD-E----------RDYAIYVISLTPN-SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEV 146 (255)
T ss_dssp E--EEEE-T----------TTTEEEEEEECTT-CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEE
T ss_pred E--EEEE-C----------CCCcEEEEEcCCC-CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC--CceE
Confidence 3 3332 1 1246777766421 11 011111 1233346 99999999988876543 3478
Q ss_pred EEecC--CCCCCcceeeeecccc-cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475 326 WLVCP--GSKDVAPRVLFDRVFE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN 402 (751)
Q Consensus 326 ~~~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 402 (751)
|.++. .+ ...+.+...... .... .....+++.|.-..|++.+. ....|..+|.+
T Consensus 147 ~~~~g~~~~--~~l~i~~~~~~~~~~~~-~d~S~l~~dp~tg~lliLS~--------------------~s~~L~~~d~~ 203 (255)
T 3qqz_A 147 YKVNGLLSS--NELHISKDKALQRQFTL-DDVSGAEFNQQKNTLLVLSH--------------------ESRALQEVTLV 203 (255)
T ss_dssp EEEESTTCS--SCCEEEECHHHHHTCCS-SCCCEEEEETTTTEEEEEET--------------------TTTEEEEECTT
T ss_pred EEEcccccC--Cceeeecchhhcccccc-CCceeEEEcCCCCeEEEEEC--------------------CCCeEEEEcCC
Confidence 88872 11 111222110000 0000 01112667777666666662 34578888886
Q ss_pred CCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 403 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 403 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
|+.......... ..........+..++++++|+ |+.+ +. |-.+|++...
T Consensus 204 -g~~~~~~~L~~g--~~~l~~~~~qpEGia~d~~G~-lyIv-sE---~n~~y~f~~~ 252 (255)
T 3qqz_A 204 -GEVIGEMSLTKG--SRGLSHNIKQAEGVAMDASGN-IYIV-SE---PNRFYRFTPQ 252 (255)
T ss_dssp -CCEEEEEECSTT--GGGCSSCCCSEEEEEECTTCC-EEEE-ET---TTEEEEEEC-
T ss_pred -CCEEEEEEcCCc--cCCcccccCCCCeeEECCCCC-EEEE-cC---CceEEEEEec
Confidence 445444443321 001111133455689999997 4444 33 3468877644
No 491
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.0032 Score=66.33 Aligned_cols=136 Identities=7% Similarity=-0.038 Sum_probs=80.6
Q ss_pred eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee--eeeccCCCCCC
Q 004475 157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAED 232 (751)
Q Consensus 157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~ 232 (751)
..|.++++++ ..+.+... .....++|++||++|+++..... .....++.++.++.-. +.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~--------~~~~~v~~~~~~g~~~~~~~l~~------ 224 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN--------NDRPNNYILTRESGFKVITELTK------ 224 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC--------TTSEEEEEEEGGGTSCSEEEEEE------
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC--------cccceEEEEeCCCceeeeeeecc------
Confidence 3688889855 55555444 55778999999999988754321 1122355555554321 12211
Q ss_pred CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec--eeEE-EEEecCC
Q 004475 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFS-VSWCDDS 309 (751)
Q Consensus 233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~~~-~~~spdg 309 (751)
......++++|++.. |+++.. ..++|++++.+ +.....+.... .... ++|+|+|
T Consensus 225 --------~~~p~giavdp~~g~-lyv~d~-----------~~~~V~~~~~~---~~~~~~~~~~~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 225 --------GQNCNGAETHPINGE-LYFNSW-----------NAGQVFRYDFT---TQETTPLFTIQDSGWEFHIQFHPSG 281 (430)
T ss_dssp --------CSSCCCEEECTTTCC-EEEEET-----------TTTEEEEEETT---TTEEEEEEECSSSSCCEEEEECTTS
T ss_pred --------CCCceEEEEeCCCCE-EEEEEC-----------CCCEEEEEECC---CCcEEEEEEcCCCCcceeEEEcCCC
Confidence 122447899995555 777541 23578998875 33332333221 1233 8999999
Q ss_pred ceEEEeeeecccceeEEEecCCC
Q 004475 310 LALVNETWYKTSQTRTWLVCPGS 332 (751)
Q Consensus 310 ~~l~~~~~~~~~~~~l~~~~~~~ 332 (751)
++|++.. .....|++++.++
T Consensus 282 ~~lyv~d---~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 282 NYAYIVV---VNQHYILRSDYDW 301 (430)
T ss_dssp SEEEEEE---TTTTEEEEEEEET
T ss_pred CEEEEEE---CCCCEEEEEeCCc
Confidence 9887765 2345788877664
No 492
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.73 E-value=0.0054 Score=64.61 Aligned_cols=157 Identities=10% Similarity=0.043 Sum_probs=91.5
Q ss_pred ccceeecCC--CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCC
Q 004475 33 INFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (751)
Q Consensus 33 ~~~p~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 110 (751)
....+|+|| +..|+++. .. ..|+++++++++.+.+..... ....++|+|||+ |+++......
T Consensus 141 P~gvavd~~s~~g~Lyv~D---------~~-~~I~~id~~~g~v~~~~~~~~-----~P~giavd~dG~-lyVad~~~~~ 204 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVG---------QR-DAFRHVDFVNQYVDIKTTNIG-----QCADVNFTLNGD-MVVVDDQSSD 204 (433)
T ss_dssp CCEEEECTTTTTCEEEEEC---------BT-SCEEEEETTTTEEEEECCCCS-----CEEEEEECTTCC-EEEEECCSCT
T ss_pred CceEEEccccCCCEEEEEe---------CC-CCEEEEECCCCEEEEeecCCC-----CccEEEECCCCC-EEEEcCCCCc
Confidence 456789995 55665542 11 789999998888777654222 246889999999 7776332100
Q ss_pred CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCCCc---eecCCCceEEeeeeCCCCc
Q 004475 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQK 187 (751)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~---~~lt~~~~~~~~~~SpDG~ 187 (751)
. ...++.++.++.. ..+........++++|++.
T Consensus 205 ~--------------------------------------------~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G 240 (433)
T 4hw6_A 205 T--------------------------------------------NTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNG 240 (433)
T ss_dssp T--------------------------------------------SEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTC
T ss_pred c--------------------------------------------cceEEEEECCCCeeccccccccCCCCEEEEeCCCC
Confidence 0 0234444443311 1222113345688999666
Q ss_pred eEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (751)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~ 266 (751)
.|++.... ...|++++.+++.. +.+...... .....++|+|||++ ||++..
T Consensus 241 ~lyv~d~~------------~~~V~~~d~~~g~~~~~~~~~~~~-----------~~~~~ia~dpdG~~-LYvad~---- 292 (433)
T 4hw6_A 241 KIYYTRYH------------HAMISSYDPATGTLTEEEVMMDTK-----------GSNFHIVWHPTGDW-AYIIYN---- 292 (433)
T ss_dssp CEEECBTT------------CSEEEEECTTTCCEEEEEEECSCC-----------SSCEEEEECTTSSE-EEEEET----
T ss_pred eEEEEECC------------CCEEEEEECCCCeEEEEEeccCCC-----------CCcccEEEeCCCCE-EEEEeC----
Confidence 78776432 34689999986654 333211110 11125899999998 777541
Q ss_pred CCccccCcccceeeccCC
Q 004475 267 DANVEVSPRDIIYTQPAE 284 (751)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~ 284 (751)
....|++++.+
T Consensus 293 -------~~~~I~~~~~d 303 (433)
T 4hw6_A 293 -------GKHCIYRVDYN 303 (433)
T ss_dssp -------TTTEEEEEEBC
T ss_pred -------CCCEEEEEeCC
Confidence 23467776654
No 493
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.69 E-value=0.0081 Score=60.55 Aligned_cols=129 Identities=8% Similarity=0.001 Sum_probs=69.7
Q ss_pred eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeec-CCC
Q 004475 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKP 254 (751)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~ 254 (751)
....+++++++..|++.... ..+++++.+++..+.+...... . .......+++.| +|+
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-------------~~i~~~d~~~g~~~~~~~~~~~--~------~~~~p~~i~~d~~~G~ 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-------------YHLSVVGSEGGHATQLATSVDG--V------PFKWLYAVTVDQRTGI 139 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-------------TEEEEECTTCEECEEEESEETT--E------ECSCEEEEEECTTTCC
T ss_pred CCceEEEcCCCCcEEEEECC-------------CCEEEEeCCCCEEEEecccCCC--C------cccccceEEEecCCCE
Confidence 35678888843456665322 2378888887765554321100 0 001234789999 885
Q ss_pred ceEEEEEeccCCCCc------cccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEE
Q 004475 255 STLYWVEAQDRGDAN------VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWL 327 (751)
Q Consensus 255 ~~i~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~ 327 (751)
|+++......... ......+.|++++.+ ++....+........ ++|+|||+.|+++.. ...+|++
T Consensus 140 --l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~---~~~~I~~ 211 (322)
T 2fp8_A 140 --VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS---TKETTLLLKELHVPGGAEVSADSSFVLVAEF---LSHQIVK 211 (322)
T ss_dssp --EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT---TTEEEEEEEEESCCCEEEECTTSSEEEEEEG---GGTEEEE
T ss_pred --EEEECCcccccccccceehcccCCCceEEEEeCC---CCEEEEeccCCccCcceEECCCCCEEEEEeC---CCCeEEE
Confidence 6665422110000 000123578888864 333333322212223 789999998877652 2357888
Q ss_pred ecCCCC
Q 004475 328 VCPGSK 333 (751)
Q Consensus 328 ~~~~~~ 333 (751)
+++++.
T Consensus 212 ~~~~~~ 217 (322)
T 2fp8_A 212 YWLEGP 217 (322)
T ss_dssp EESSST
T ss_pred EECCCC
Confidence 888763
No 494
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=0.0071 Score=63.88 Aligned_cols=164 Identities=10% Similarity=0.063 Sum_probs=96.5
Q ss_pred cceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEE-------ecCCcEEEEee
Q 004475 34 NFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-------VNNSTLLIFTI 105 (751)
Q Consensus 34 ~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~w-------spDg~~l~~~~ 105 (751)
...+++| |+..|+.+. .....|+++|++++..+.+.......++ ....++| +++|++|++..
T Consensus 142 ~~la~dp~~~~~Lyv~~---------~~~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyvad 211 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICY---------DGHKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVAI 211 (496)
T ss_dssp EEEEEETTEEEEEEEEE---------ETEEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEEE
T ss_pred CEEEEccCCCCEEEEEE---------CCCCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEEe
Confidence 4568899 466665543 2346799999999887776544321111 2467899 99999888874
Q ss_pred cCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC--CCCc------eecCCCceE
Q 004475 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTA------KDFGTPAVY 177 (751)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~G~~------~~lt~~~~~ 177 (751)
...... .....++.++. +|+. +.+......
T Consensus 212 ~~~~~~------------------------------------------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p 249 (496)
T 3kya_A 212 DYDGKG------------------------------------------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQC 249 (496)
T ss_dssp CCCTTG------------------------------------------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCC
T ss_pred CCCCCc------------------------------------------ccCceEEEEecCCCCceeecccceeeccCCCc
Confidence 432100 00124555544 3432 223211334
Q ss_pred EeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC-------Ccee------------eeeccCCCCCCCCCccC
Q 004475 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-------GKLV------------RELCDLPPAEDIPVCYN 238 (751)
Q Consensus 178 ~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~-------~~~~------------~~l~~~~~~~~~~~~~~ 238 (751)
..++.+|++++|+++... ...|+++|++ ++.. +++...+
T Consensus 250 ~giavdp~~g~LYvtd~~------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~---------- 307 (496)
T 3kya_A 250 NGATIHPINGELYFNSYE------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA---------- 307 (496)
T ss_dssp CCEEECTTTCCEEEEETT------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS----------
T ss_pred eEEEEcCCCCeEEEEECC------------CCEEEEEecccccccccCceeecccccccccccceeEecC----------
Confidence 567889999999987543 3468999987 4543 1111111
Q ss_pred CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCC
Q 004475 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAE 284 (751)
Q Consensus 239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~ 284 (751)
.....+.++|+|+|+. ||++.. ...+|+.++.+
T Consensus 308 -~~~~p~~ia~~p~G~~-lYvaD~-----------~~h~I~kid~d 340 (496)
T 3kya_A 308 -DPSWEFQIFIHPTGKY-AYFGVI-----------NNHYFMRSDYD 340 (496)
T ss_dssp -SSSCCEEEEECTTSSE-EEEEET-----------TTTEEEEEEEE
T ss_pred -CCCCceEEEEcCCCCE-EEEEeC-----------CCCEEEEEecC
Confidence 1122458999999997 666541 23467776654
No 495
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.59 E-value=0.0014 Score=66.89 Aligned_cols=92 Identities=13% Similarity=0.007 Sum_probs=55.3
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCc-----ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccC
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDG-----AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~-----~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~ 79 (751)
..|+++|+.+ |+..+...++.. ......+++|++..++++... ......|+++++++++..++..
T Consensus 93 ~~i~~~d~~t----g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~------~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 93 PKLVAWDTLN----NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA------PDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp CEEEEEETTT----TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC------SGGGCEEEEEETTTCCEEEECT
T ss_pred CeEEEEECCC----CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCc------cCCCCeEEEEECCCCCEEEEec
Confidence 4788899888 874332223221 134678899987666553210 0145789999998887666432
Q ss_pred CC-C------------cc------------ccceeeeeEEecCCcEEEEeec
Q 004475 80 SP-D------------IC------------LNAVFGSFVWVNNSTLLIFTIP 106 (751)
Q Consensus 80 ~~-~------------~~------------~~~~~~~~~wspDg~~l~~~~~ 106 (751)
.. . .. +......++|||||+.|++...
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 20 0 00 0012457899999999988743
No 496
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.58 E-value=0.029 Score=57.18 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=63.5
Q ss_pred ceEEeeeeCCC---CceEEEEEecCCcccccccCCCceeEEEEeCCCce---eeee-ccCCCCCCCCCccCCccCCCcee
Q 004475 175 AVYTAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---VREL-CDLPPAEDIPVCYNSVREGMRSI 247 (751)
Q Consensus 175 ~~~~~~~~SpD---G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~~l-~~~~~~~~~~~~~~~~~~~~~~~ 247 (751)
.....++++|| +++|++....... .....|++++.+++. .+.+ ...+.. .........+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~-------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~-------~~~~h~~~~l 140 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEG-------GLRNQVVRLRHLGERGVLDRVVLDGIPAR-------PHGLHSGGRI 140 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTT-------SSEEEEEEEEECSSCEEEEEEEEEEECCC-------TTCCCCCCCE
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCC-------CCccEEEEEEeCCCCcCceEEEEEeCCCC-------CCCCcCCceE
Confidence 46678999999 7788776543210 112568888877542 2222 112210 0011234589
Q ss_pred eeecCCCceEEEEEeccCCCCcc---ccCcccceeeccCCCCCC-------------CCceEeEeeceeEE-EEEecCCc
Q 004475 248 SWRADKPSTLYWVEAQDRGDANV---EVSPRDIIYTQPAEPAEG-------------EKPEILHKLDLRFS-VSWCDDSL 310 (751)
Q Consensus 248 ~~spdG~~~i~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~-------------~~~~~l~~~~~~~~-~~~spdg~ 310 (751)
+|+||| + ||++... .+.... .....+.|++++.+ + ...+.....-.... ++|+|+..
T Consensus 141 ~~~pdG-~-Lyv~~G~-~~~~~~~~d~~~~~g~I~ri~~d---G~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g 214 (352)
T 2ism_A 141 AFGPDG-M-LYVTTGE-VYERELAQDLASLGGKILRLTPE---GEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTG 214 (352)
T ss_dssp EECTTS-C-EEEECCC-TTCGGGGGCTTCSSSEEEEECTT---SSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTC
T ss_pred EECCCC-C-EEEEECC-CCCCccccCCCCCceEEEEEcCC---CCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCC
Confidence 999999 4 6665422 111100 01233688888875 3 12333333333334 88999544
Q ss_pred eEEEee
Q 004475 311 ALVNET 316 (751)
Q Consensus 311 ~l~~~~ 316 (751)
.|+.+.
T Consensus 215 ~l~v~d 220 (352)
T 2ism_A 215 ELFSSE 220 (352)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 455544
No 497
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.56 E-value=0.0058 Score=61.76 Aligned_cols=160 Identities=18% Similarity=0.057 Sum_probs=89.2
Q ss_pred eeEEeecCCCCCCCCcccccCCC---Ccc--cccceeecC--CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeecc
Q 004475 6 GIGIHRLLPDDSLGPEKEVHGYP---DGA--KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (751)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~l~~~~---~~~--~~~~p~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt 78 (751)
.|+++|+++ .+++.++|.... ... ......+.+ ||+.-.|+.+.. .......||.++.+++..+.+.
T Consensus 84 ~I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~----~~~s~ielf~~d~~~~~~~~~~ 157 (355)
T 3sre_A 84 KILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP----GSSSTVEVFKFQEEEKSLLHLK 157 (355)
T ss_dssp EEEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS----TTCCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC----CCCCeEEEEEEECCCCEEEEEe
Confidence 599999875 335655554211 101 122333433 687666776522 1245578888888776666664
Q ss_pred CCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeE
Q 004475 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (751)
Q Consensus 79 ~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (751)
......++ ..+.++..+||. ++++....-.. ..+.. .. .+.....+.
T Consensus 158 ~~~g~~~~-~pND~~v~~~G~-fyvt~~~~ftd------------------------~~~~~------~e-~~~~~~~g~ 204 (355)
T 3sre_A 158 TIRHKLLP-SVNDIVAVGPEH-FYATNDHYFID------------------------PYLKS------WE-MHLGLAWSF 204 (355)
T ss_dssp EECCTTCS-SEEEEEEEETTE-EEEEESCSCSS------------------------HHHHH------HH-HHTTCCCEE
T ss_pred ccccCCCC-CCceEEEeCCCC-EEecCCcEeCC------------------------ccccc------ch-hhccCCccE
Confidence 44433333 356888999996 44442210000 00000 00 000012368
Q ss_pred EEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC
Q 004475 159 LVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (751)
Q Consensus 159 l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (751)
||.++. ++.+.+... .....++|||||++|+++... ...|++++.+
T Consensus 205 vyr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt~------------~~~I~~~~~~ 251 (355)
T 3sre_A 205 VTYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELL------------AHKIHVYEKH 251 (355)
T ss_dssp EEEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEEC
T ss_pred EEEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeCC------------CCeEEEEEEC
Confidence 999887 455555444 455689999999999997543 3468888875
No 498
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.55 E-value=0.021 Score=58.20 Aligned_cols=152 Identities=18% Similarity=0.182 Sum_probs=77.1
Q ss_pred eEEEEEcCCCCceecC------CC-ceEEeeeeCCC---CceEEEEEec-CCcccccccCCCceeEEEEeCCCc-----e
Q 004475 157 AQLVLGSLDGTAKDFG------TP-AVYTAVEPSPD---QKYVLITSMH-RPYSYKVPCARFSQKVQVWTTDGK-----L 220 (751)
Q Consensus 157 ~~l~~~~~~G~~~~lt------~~-~~~~~~~~SpD---G~~i~~~~~~-~~~~~~~~~~~~~~~l~~~d~~~~-----~ 220 (751)
..|++++.+|+ +.+. .. .....++++|| +.+|++.... ... ......|++++.++. .
T Consensus 49 g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~------~~~~~~v~r~~~~~~~~~~~~ 121 (354)
T 3a9g_A 49 GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG------GHIRNRVIRGRLDGSTFKLKE 121 (354)
T ss_dssp TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG------GCEEEEEEEEEECSSSCCEEE
T ss_pred CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC------CCcceEEEEEEECCCCcCcCc
Confidence 36777766665 3321 12 45678999998 7777776432 100 001246888887654 1
Q ss_pred eeee-ccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCcc---ccCcccceeeccCCCCCCC-------
Q 004475 221 VREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV---EVSPRDIIYTQPAEPAEGE------- 289 (751)
Q Consensus 221 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~------- 289 (751)
.+.+ ...+. ........+.|.|||+ ||++... .+.... .....+.|++++.+ +.
T Consensus 122 ~~~l~~~~~~---------~~~h~~~~l~~~pDG~--Lyvt~G~-~~~~~~~~d~~~~~G~I~ri~~d---G~~p~~npf 186 (354)
T 3a9g_A 122 VKTLIDGIPG---------AYIHNGGRIRFGPDGM--LYITTGD-AADPRLAQDLSSLAGKILRVDEE---GRPPADNPF 186 (354)
T ss_dssp EEEEEEEEEC---------CSSCCCCCEEECTTSC--EEEECCC-TTCGGGGTCTTCCSSEEEEECTT---SCCCTTSSS
T ss_pred cEEEEEcCCC---------CCCcCCceEEECCCCc--EEEEECC-CCCCccccCCCCCCeEEEEEcCC---CCCCCCCCC
Confidence 2222 11110 1112345799999995 6665322 111100 11234688998875 33
Q ss_pred -CceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecC
Q 004475 290 -KPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCP 330 (751)
Q Consensus 290 -~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~ 330 (751)
..+.....-.... ++|+|+...|+++........+|.++..
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 1233333322333 8899954446555433223345666543
No 499
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.50 E-value=0.011 Score=55.83 Aligned_cols=207 Identities=6% Similarity=-0.070 Sum_probs=112.2
Q ss_pred eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCc
Q 004475 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (751)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~ 255 (751)
-.+.+.|++ .+|+.+..... .+.|..+|+++++..+-...+.. .......++|++
T Consensus 22 ftqGL~~~~--~~LyestG~~g----------~S~v~~vD~~tgkv~~~~~l~~~-------------~fgeGi~~~~~~ 76 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETG----------RSSVRKVDLETGRILQRAEVPPP-------------YFGAGIVAWRDR 76 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTT----------SCEEEEEETTTCCEEEEEECCTT-------------CCEEEEEEETTE
T ss_pred ccccEEEEC--CEEEEECCCCC----------CceEEEEECCCCCEEEEEeCCCC-------------cceeEEEEeCCE
Confidence 345778874 56766543311 35789999998866543222211 123345566777
Q ss_pred eEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCC
Q 004475 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 334 (751)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 334 (751)
|+.+. +..+.++++|.+ ..+.+......-. ...++|++.|+.+. +...|+.+|+.+.
T Consensus 77 -ly~lt-----------w~~~~v~v~D~~-----tl~~~~ti~~~~~Gwglt~dg~~L~vSd----gs~~l~~iDp~t~- 134 (243)
T 3mbr_X 77 -LIQLT-----------WRNHEGFVYDLA-----TLTPRARFRYPGEGWALTSDDSHLYMSD----GTAVIRKLDPDTL- 134 (243)
T ss_dssp -EEEEE-----------SSSSEEEEEETT-----TTEEEEEEECSSCCCEEEECSSCEEEEC----SSSEEEEECTTTC-
T ss_pred -EEEEE-----------eeCCEEEEEECC-----cCcEEEEEeCCCCceEEeeCCCEEEEEC----CCCeEEEEeCCCC-
Confidence 55543 133689999975 2223322221112 35568898877653 2458999999885
Q ss_pred Ccceeeeec-ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475 335 VAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 413 (751)
Q Consensus 335 ~~~~~l~~~-~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 413 (751)
.....+.-. ....+. ..+.+.|. +|+ |+...+ ....|.++|.++|+....+...
T Consensus 135 ~~~~~I~V~~~g~~~~---~lNeLe~~-~G~-lyanvw--------------------~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 135 QQVGSIKVTAGGRPLD---NLNELEWV-NGE-LLANVW--------------------LTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp CEEEEEECEETTEECC---CEEEEEEE-TTE-EEEEET--------------------TTTEEEEECTTTCBEEEEEECG
T ss_pred eEEEEEEEccCCcccc---cceeeEEe-CCE-EEEEEC--------------------CCCeEEEEECCCCCEEEEEECC
Confidence 211222111 100000 00012233 664 544442 2347999999999987766543
Q ss_pred chhhhhcee----eeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475 414 REKYFETAV----ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 459 (751)
Q Consensus 414 ~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~ 459 (751)
+ ...... ......+.++++|++++|+++...+ +.+|.+.+.
T Consensus 190 ~--l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 190 A--LVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp G--GSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC---SEEEEEEEC
T ss_pred c--CccccccccCCcCCceEEEEEcCCCCEEEEECCCC---CcEEEEEEe
Confidence 2 000000 0111235589999999999887554 457776653
No 500
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.49 E-value=0.0036 Score=59.65 Aligned_cols=169 Identities=12% Similarity=0.043 Sum_probs=99.6
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCCc
Q 004475 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDI 83 (751)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~~ 83 (751)
+.|.++|+.+ |+..+-..++. ....-.++++|++|+.+. .....++++|+++.+. .++....
T Consensus 65 S~v~~vD~~T----gkv~~~~~l~~--~~FgeGit~~g~~ly~lt---------w~~~~v~v~D~~t~~~~~ti~~~~-- 127 (262)
T 3nol_A 65 SSIRKVDIES----GKTLQQIELGK--RYFGEGISDWKDKIVGLT---------WKNGLGFVWNIRNLRQVRSFNYDG-- 127 (262)
T ss_dssp EEEEEECTTT----CCEEEEEECCT--TCCEEEEEEETTEEEEEE---------SSSSEEEEEETTTCCEEEEEECSS--
T ss_pred ceEEEEECCC----CcEEEEEecCC--ccceeEEEEeCCEEEEEE---------eeCCEEEEEECccCcEEEEEECCC--
Confidence 4688889988 98876544443 233445778898886543 4558999999998774 3443222
Q ss_pred cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (751)
Q Consensus 84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 163 (751)
.....++||++|+.+. +...|+.+|
T Consensus 128 ------eG~glt~dg~~L~~Sd-------------------------------------------------Gs~~i~~iD 152 (262)
T 3nol_A 128 ------EGWGLTHNDQYLIMSD-------------------------------------------------GTPVLRFLD 152 (262)
T ss_dssp ------CCCCEEECSSCEEECC-------------------------------------------------SSSEEEEEC
T ss_pred ------CceEEecCCCEEEEEC-------------------------------------------------CCCeEEEEc
Confidence 1224567998887651 114788888
Q ss_pred C-CCCc-eec--CCC----ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCC-CCCCCC
Q 004475 164 L-DGTA-KDF--GTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP-PAEDIP 234 (751)
Q Consensus 164 ~-~G~~-~~l--t~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~~~~~ 234 (751)
. +.+. .++ +.. ..+.++.|. ||+ |++..-. ...|.++|++++++....+.. +....
T Consensus 153 p~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~------------~~~I~vIDp~tG~V~~~Id~~~L~~~~- 217 (262)
T 3nol_A 153 PESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQ------------TNKIVRIDPETGKVTGIIDLNGILAEA- 217 (262)
T ss_dssp TTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT------------SSEEEEECTTTCBEEEEEECTTGGGGS-
T ss_pred CCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEcc------------CCeEEEEECCCCcEEEEEECCcCcccc-
Confidence 8 5532 232 211 223356776 774 6654321 457999999988765443332 11000
Q ss_pred CccCCccCCCceeeeecCCCceEEEEE
Q 004475 235 VCYNSVREGMRSISWRADKPSTLYWVE 261 (751)
Q Consensus 235 ~~~~~~~~~~~~~~~spdG~~~i~~~~ 261 (751)
...........+++|+|++++ ++.+.
T Consensus 218 ~~~~~~~~vlNGIA~dp~~~~-lfVTG 243 (262)
T 3nol_A 218 GPLPSPIDVLNGIAWDKEHHR-LFVTG 243 (262)
T ss_dssp CSCCSSCCCEEEEEEETTTTE-EEEEE
T ss_pred ccccCcCCceEEEEEcCCCCE-EEEEC
Confidence 000111123458999999998 66653
Done!