Query         004475
Match_columns 751
No_of_seqs    360 out of 3847
Neff          10.5
Searched_HMMs 13730
Date          Tue Mar 26 02:18:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004475.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004475hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2hu7a2 c.69.1.33 (A:322-581)  100.0 1.1E-28 7.8E-33  243.5  22.7  242  479-741    10-259 (260)
  2 d2bgra2 c.69.1.24 (A:509-766)  100.0 1.3E-28 9.7E-33  242.7  21.6  248  479-741     1-256 (258)
  3 d1xfda2 c.69.1.24 (A:592-849)   99.9 5.5E-28   4E-32  238.2  14.6  239  489-741    10-257 (258)
  4 d2jbwa1 c.69.1.41 (A:8-367) 2,  99.9 2.7E-24   2E-28  221.0  22.2  236  476-743   101-346 (360)
  5 d1vlqa_ c.69.1.25 (A:) Acetyl   99.9 9.6E-23   7E-27  207.8  22.1  233  476-741    50-322 (322)
  6 d1qfma2 c.69.1.4 (A:431-710) P  99.9   7E-22 5.1E-26  196.9  27.6  250  479-744     5-278 (280)
  7 d1l7aa_ c.69.1.25 (A:) Cephalo  99.9 1.1E-22 8.2E-27  206.8  21.8  232  476-741    51-317 (318)
  8 d1xfda1 b.70.3.1 (A:127-591) D  99.9 3.1E-21 2.3E-25  204.9  33.0  356    6-467    38-450 (465)
  9 d2hqsa1 b.68.4.1 (A:163-431) T  99.9 3.7E-21 2.7E-25  190.3  29.6  252   43-414     4-258 (269)
 10 d2hqsa1 b.68.4.1 (A:163-431) T  99.9 2.6E-21 1.9E-25  191.4  26.3  247    4-361    18-267 (269)
 11 d2bgra1 b.70.3.1 (A:39-508) Di  99.9   1E-20 7.5E-25  203.6  30.5  359    6-468    37-457 (470)
 12 d1xfda1 b.70.3.1 (A:127-591) D  99.9 6.5E-20 4.8E-24  194.6  34.0  332    2-413    88-453 (465)
 13 d2fuka1 c.69.1.36 (A:3-220) XC  99.9 1.1E-20 8.1E-25  176.5  23.5  210  480-742     7-216 (218)
 14 d1k32a3 b.69.9.1 (A:320-679) T  99.9 1.2E-20   9E-25  194.8  24.7  318    5-466    24-351 (360)
 15 d1k32a2 b.68.7.1 (A:39-319) Tr  99.9   2E-20 1.4E-24  186.2  23.5  255   36-411     4-270 (281)
 16 d1jfra_ c.69.1.16 (A:) Lipase   99.8 2.4E-20 1.8E-24  182.0  20.4  206  480-743    22-232 (260)
 17 d1dina_ c.69.1.9 (A:) Dienelac  99.8   3E-20 2.2E-24  178.5  19.5  207  481-738     3-230 (233)
 18 d1thta_ c.69.1.13 (A:) Myristo  99.8   6E-20 4.4E-24  183.6  22.1  227  481-737     4-259 (302)
 19 d1jkma_ c.69.1.2 (A:) Carboxyl  99.8 3.8E-20 2.8E-24  189.8  19.2  244  475-740    73-355 (358)
 20 d1lzla_ c.69.1.2 (A:) Heroin e  99.8 1.7E-19 1.3E-23  182.4  22.8  238  476-741    45-316 (317)
 21 d2pbla1 c.69.1.2 (A:1-261) Unc  99.8 3.3E-19 2.4E-23  173.0  20.8  190  491-718    47-242 (261)
 22 d1k32a3 b.69.9.1 (A:320-679) T  99.8 3.4E-19 2.4E-23  183.8  21.7  190   33-317     5-198 (360)
 23 d1ufoa_ c.69.1.27 (A:) Hypothe  99.8   4E-19 2.9E-23  171.9  20.4  221  479-741     3-236 (238)
 24 d2h1ia1 c.69.1.14 (A:1-202) Ca  99.8 1.3E-18 9.6E-23  163.3  22.1  190  498-740     5-202 (202)
 25 d1ju3a2 c.69.1.21 (A:5-351) Ba  99.8 4.4E-19 3.2E-23  182.0  20.1  237  482-744     6-322 (347)
 26 d2bgra1 b.70.3.1 (A:39-508) Di  99.8 8.8E-18 6.4E-22  180.3  31.1  331    2-413    89-459 (470)
 27 d1jjia_ c.69.1.2 (A:) Carboxyl  99.8 5.1E-19 3.7E-23  177.8  19.1  226  480-737    55-309 (311)
 28 d2i3da1 c.69.1.36 (A:2-219) Hy  99.8 2.9E-17 2.1E-21  155.2  27.6  212  484-745     3-215 (218)
 29 d1mpxa2 c.69.1.21 (A:24-404) A  99.8 2.4E-18 1.7E-22  177.5  20.7  249  479-743    22-356 (381)
 30 d1u4na_ c.69.1.2 (A:) Carboxyl  99.8 1.7E-18 1.2E-22  174.4  19.0  233  479-740    44-307 (308)
 31 d1fj2a_ c.69.1.14 (A:) Acyl pr  99.8   6E-18 4.4E-22  161.6  21.9  135  580-741    91-227 (229)
 32 d1jjfa_ c.69.1.2 (A:) Feruloyl  99.8 2.8E-17   2E-21  160.4  25.7  210  476-719    17-233 (255)
 33 d1imja_ c.69.1.23 (A:) Ccg1/Ta  99.8 1.2E-19   9E-24  170.4   7.4  191  489-738    13-207 (208)
 34 d1q0ra_ c.69.1.28 (A:) Aclacin  99.8 5.3E-18 3.8E-22  169.9  19.8  212  489-738     7-295 (297)
 35 d1k32a2 b.68.7.1 (A:39-319) Tr  99.8 2.3E-17 1.7E-21  163.6  22.9  246    6-342    22-270 (281)
 36 d1k8qa_ c.69.1.6 (A:) Gastric   99.8 1.4E-17   1E-21  172.9  21.8  240  478-738    24-376 (377)
 37 d1vkha_ c.69.1.32 (A:) Putativ  99.8 2.6E-18 1.9E-22  168.8  14.5  192  511-720    30-248 (263)
 38 d1lnsa3 c.69.1.21 (A:146-550)   99.8 2.7E-17   2E-21  171.0  22.9  242  490-743    37-379 (405)
 39 d3c8da2 c.69.1.2 (A:151-396) E  99.7 8.8E-18 6.4E-22  162.8  16.3  231  474-739     8-244 (246)
 40 d3b5ea1 c.69.1.14 (A:7-215) Un  99.7 6.3E-17 4.6E-21  152.1  21.4  178  511-737    22-207 (209)
 41 d1mtza_ c.69.1.7 (A:) Tricorn   99.7 9.3E-18 6.8E-22  167.0  16.2  215  488-740     8-290 (290)
 42 d1c4xa_ c.69.1.10 (A:) 2-hydro  99.7 1.7E-16 1.2E-20  157.3  22.3  222  481-737     4-280 (281)
 43 d1a88a_ c.69.1.12 (A:) Chlorop  99.7 6.8E-16 4.9E-20  152.1  23.9  215  485-737     2-274 (275)
 44 d1sfra_ c.69.1.3 (A:) Antigen   99.7 3.1E-16 2.2E-20  155.8  21.4  242  479-743     7-286 (288)
 45 d1tqha_ c.69.1.29 (A:) Carboxy  99.7 7.2E-17 5.2E-21  155.3  16.0  201  512-738    11-239 (242)
 46 d2b9va2 c.69.1.21 (A:50-434) A  99.7 3.5E-16 2.5E-20  161.7  22.1  252  479-745    26-362 (385)
 47 d1a8qa_ c.69.1.12 (A:) Bromope  99.7 7.5E-16 5.5E-20  151.7  23.2  214  486-738     3-274 (274)
 48 d1auoa_ c.69.1.14 (A:) Carboxy  99.7 9.3E-16 6.8E-20  145.1  22.8  118  595-741   100-218 (218)
 49 d1gxra_ b.69.4.1 (A:) Groucho/  99.7 8.2E-15   6E-19  149.2  30.8  281   27-458    48-335 (337)
 50 d2rhwa1 c.69.1.10 (A:4-286) 2-  99.7 5.5E-16   4E-20  153.7  20.6  199  512-738    30-282 (283)
 51 d1j1ia_ c.69.1.10 (A:) Meta cl  99.7 4.4E-16 3.2E-20  152.9  19.0  213  488-738     8-267 (268)
 52 d1nr0a1 b.69.4.1 (A:2-312) Act  99.7   2E-14 1.5E-18  144.2  31.8  250   33-411    20-277 (311)
 53 d2r8ba1 c.69.1.14 (A:44-246) U  99.7 1.6E-16 1.2E-20  148.9  14.1  110  598-739    93-202 (203)
 54 d1zd3a2 c.69.1.11 (A:225-547)   99.7 6.9E-16   5E-20  156.1  18.9  214  487-741    17-321 (322)
 55 d1xkla_ c.69.1.20 (A:) Salicyl  99.7 1.3E-15 9.2E-20  148.0  19.6  200  513-739     3-257 (258)
 56 d1uk8a_ c.69.1.10 (A:) Meta-cl  99.7 4.2E-16   3E-20  153.4  16.0  211  489-738    10-270 (271)
 57 d2gzsa1 c.69.1.38 (A:41-305) E  99.7 1.4E-16   1E-20  156.3  12.4  206  480-719    12-249 (265)
 58 d1a8sa_ c.69.1.12 (A:) Chlorop  99.7 4.6E-15 3.4E-19  145.8  23.0  213  485-737     2-272 (273)
 59 d1brta_ c.69.1.12 (A:) Bromope  99.7 6.1E-15 4.5E-19  145.2  23.9  197  512-738    23-277 (277)
 60 d1azwa_ c.69.1.7 (A:) Proline   99.7 9.4E-16 6.8E-20  154.5  17.6  122  482-636    12-137 (313)
 61 d1va4a_ c.69.1.12 (A:) Arylest  99.6 4.8E-15 3.5E-19  145.4  22.0  213  485-737     2-270 (271)
 62 d1uxoa_ c.69.1.31 (A:) Hypothe  99.6   1E-15 7.3E-20  141.2  15.1  179  514-737     3-185 (186)
 63 d1b6ga_ c.69.1.8 (A:) Haloalka  99.6 6.3E-16 4.6E-20  155.6  14.6  213  489-738    31-309 (310)
 64 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.6 9.2E-14 6.7E-18  138.3  29.7  267    6-410    13-282 (301)
 65 d3c70a1 c.69.1.20 (A:2-257) Hy  99.6 3.2E-15 2.3E-19  145.1  16.9  180  545-739    20-255 (256)
 66 d1bn7a_ c.69.1.8 (A:) Haloalka  99.6 1.2E-15 8.7E-20  151.8  13.7  210  489-738    14-289 (291)
 67 d1pv1a_ c.69.1.34 (A:) Hypothe  99.6 6.3E-15 4.6E-19  144.4  18.1  244  481-741    14-297 (299)
 68 d1l0qa2 b.69.2.3 (A:1-301) Sur  99.6 8.9E-13 6.5E-17  131.0  33.6  274   45-464     3-279 (301)
 69 d1hkha_ c.69.1.12 (A:) Gamma-l  99.6 1.3E-14 9.5E-19  143.1  19.1  196  512-738    23-279 (279)
 70 d1m33a_ c.69.1.26 (A:) Biotin   99.6 2.9E-15 2.1E-19  145.9  13.8  192  512-738    11-253 (256)
 71 d1hzua2 b.70.2.1 (A:118-543) C  99.6 3.4E-13 2.5E-17  141.8  30.3  325   32-466    20-403 (426)
 72 d1gxra_ b.69.4.1 (A:) Groucho/  99.6 3.5E-13 2.5E-17  136.9  28.8  245    6-370    73-325 (337)
 73 d1nr0a1 b.69.4.1 (A:2-312) Act  99.6 4.6E-13 3.3E-17  134.1  27.7  222    6-333    39-270 (311)
 74 d1wm1a_ c.69.1.7 (A:) Proline   99.6 5.4E-14 3.9E-18  140.6  20.3  121  482-635    12-136 (313)
 75 d1ehya_ c.69.1.11 (A:) Bacteri  99.6 5.7E-14 4.2E-18  139.4  20.0  213  482-736     9-292 (293)
 76 d2madh_ b.69.2.1 (H:) Methylam  99.6 4.1E-12   3E-16  130.7  35.0  310   32-465    22-355 (373)
 77 d2bbkh_ b.69.2.1 (H:) Methylam  99.5 1.9E-12 1.4E-16  132.1  30.4  314   36-465     7-337 (355)
 78 d1ri6a_ b.69.11.1 (A:) Putativ  99.5 8.3E-13 6.1E-17  133.4  26.9  286    5-409    14-315 (333)
 79 d1r88a_ c.69.1.3 (A:) Antigen   99.5 1.8E-13 1.3E-17  133.3  19.8  217  480-719     3-248 (267)
 80 d1hzua2 b.70.2.1 (A:118-543) C  99.5 1.9E-13 1.4E-17  143.9  20.1   85    5-105    42-127 (426)
 81 d1nr0a2 b.69.4.1 (A:313-611) A  99.5 5.6E-12   4E-16  125.2  28.6  237   32-409    14-261 (299)
 82 d1k8kc_ b.69.4.1 (C:) Arp2/3 c  99.5 1.8E-12 1.3E-16  133.5  25.3  232   32-370     9-262 (371)
 83 d1wb4a1 c.69.1.2 (A:803-1075)   99.5 9.4E-13 6.8E-17  129.2  22.1  210  480-719    26-258 (273)
 84 d1qksa2 b.70.2.1 (A:136-567) C  99.5   6E-12 4.4E-16  131.9  29.6  206   34-332    22-238 (432)
 85 d1pbyb_ b.69.2.2 (B:) Quinohem  99.5 5.3E-12 3.9E-16  127.4  26.9  292    4-412    10-319 (337)
 86 d1ri6a_ b.69.11.1 (A:) Putativ  99.5 6.9E-12   5E-16  126.5  27.4  231  175-470    83-319 (333)
 87 d1r3da_ c.69.1.35 (A:) Hypothe  99.5 6.6E-14 4.8E-18  136.0  11.7  195  512-740    16-263 (264)
 88 d1qksa2 b.70.2.1 (A:136-567) C  99.5 7.3E-13 5.3E-17  139.0  20.6  169    5-261    42-225 (432)
 89 d1dqza_ c.69.1.3 (A:) Antigen   99.5 1.4E-12   1E-16  128.1  21.2  237  479-737     4-279 (280)
 90 d2bbkh_ b.69.2.1 (H:) Methylam  99.5 9.1E-12 6.6E-16  127.0  27.5  278    4-409    27-338 (355)
 91 d1mdah_ b.69.2.1 (H:) Methylam  99.5 5.8E-12 4.2E-16  129.4  25.7  314   33-466    22-352 (368)
 92 d1jmxb_ b.69.2.2 (B:) Quinohem  99.4   3E-12 2.2E-16  129.8  22.1  293   36-465     2-327 (346)
 93 d2madh_ b.69.2.1 (H:) Methylam  99.4 2.8E-11   2E-15  124.3  29.3  291    4-410    46-357 (373)
 94 d1erja_ b.69.4.1 (A:) Tup1, C-  99.4 2.3E-10 1.7E-14  117.8  32.6  287   31-458    63-385 (388)
 95 d1k8kc_ b.69.4.1 (C:) Arp2/3 c  99.4 7.3E-11 5.3E-15  121.1  28.2  229  157-464    29-279 (371)
 96 d1nr0a2 b.69.4.1 (A:313-611) A  99.4 2.3E-11 1.7E-15  120.7  23.5  252    4-370    33-287 (299)
 97 d1qlwa_ c.69.1.15 (A:) A novel  99.4 2.3E-14 1.7E-18  144.4   1.1  223  494-739    46-316 (318)
 98 d1vyhc1 b.69.4.1 (C:92-408) Pl  99.4 1.9E-10 1.4E-14  114.1  29.2  269   32-443    19-307 (317)
 99 d1jmxb_ b.69.2.2 (B:) Quinohem  99.4 3.9E-11 2.8E-15  121.4  23.7  291    4-412    17-331 (346)
100 d1mj5a_ c.69.1.8 (A:) Haloalka  99.4   5E-12 3.6E-16  125.0  16.5  211  489-739    15-292 (298)
101 d1pgua1 b.69.4.1 (A:2-326) Act  99.3 4.3E-10 3.1E-14  112.8  29.3  168  175-412   116-291 (325)
102 d1mdah_ b.69.2.1 (H:) Methylam  99.3 3.1E-11 2.3E-15  123.8  19.5  266    4-333    45-347 (368)
103 d1pbyb_ b.69.2.2 (B:) Quinohem  99.3 3.9E-10 2.8E-14  113.3  24.7  136   60-260     9-152 (337)
104 d1pjaa_ c.69.1.13 (A:) Palmito  99.3 3.4E-11 2.5E-15  116.8  16.1   82  545-635    20-104 (268)
105 d1erja_ b.69.4.1 (A:) Tup1, C-  99.2 1.3E-09 9.5E-14  112.0  26.5  238   32-370   123-375 (388)
106 d1vyhc1 b.69.4.1 (C:92-408) Pl  99.2 2.2E-09 1.6E-13  106.2  27.2  247    4-370    38-308 (317)
107 d1ispa_ c.69.1.18 (A:) Lipase   99.2 7.1E-11 5.2E-15  106.8  14.4  152  545-737    20-173 (179)
108 d1tbga_ b.69.4.1 (A:) beta1-su  99.2 5.9E-10 4.3E-14  112.0  22.8  267   32-370    57-331 (340)
109 d2d81a1 c.69.1.37 (A:21-338) P  99.2 1.2E-11 8.4E-16  121.0   8.8  145  596-742     6-178 (318)
110 d1jofa_ b.69.10.1 (A:) 3-carbo  99.2 1.9E-09 1.4E-13  109.6  24.4  188    6-261    15-211 (365)
111 d1qo7a_ c.69.1.11 (A:) Bacteri  99.2 1.7E-10 1.3E-14  119.0  16.6  212  489-739    89-393 (394)
112 d2b61a1 c.69.1.40 (A:2-358) Ho  99.1 2.1E-09 1.5E-13  106.5  19.5  152  581-737   115-355 (357)
113 d1qfma1 b.69.7.1 (A:1-430) Pro  99.1 4.6E-08 3.4E-12  101.5  31.0  321   40-463    81-417 (430)
114 d1pgua1 b.69.4.1 (A:2-326) Act  99.1 6.3E-09 4.6E-13  104.1  21.9  206   32-333    65-283 (325)
115 d2pl5a1 c.69.1.40 (A:5-366) Ho  99.0 6.9E-09   5E-13  102.8  20.4  152  581-737   122-359 (362)
116 d2h7xa1 c.69.1.22 (A:9-291) Pi  99.0 3.8E-10 2.8E-14  110.2  10.1  173  552-738    86-281 (283)
117 d1tbga_ b.69.4.1 (A:) beta1-su  99.0 3.3E-08 2.4E-12   98.8  24.8  121  276-442   206-329 (340)
118 d1jmkc_ c.69.1.22 (C:) Surfact  99.0 4.9E-10 3.5E-14  106.0  10.1  185  511-737    16-227 (230)
119 d1cvla_ c.69.1.18 (A:) Lipase   98.8 1.1E-08 8.3E-13  101.2  13.9   83  545-636    32-114 (319)
120 d1yfqa_ b.69.4.2 (A:) Cell cyc  98.8 4.6E-07 3.3E-11   89.9  25.6   60   32-104    13-74  (342)
121 d1qnia2 b.69.3.1 (A:10-450) Ni  98.8   4E-08 2.9E-12   99.6  17.4  116   38-196    79-197 (441)
122 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.8 1.7E-06 1.3E-10   85.3  27.8  244  157-459    61-310 (319)
123 d1qfma1 b.69.7.1 (A:1-430) Pro  98.8 9.8E-07 7.1E-11   91.2  27.1  282   34-407   128-418 (430)
124 d2vata1 c.69.1.40 (A:7-382) Ac  98.8 5.8E-08 4.2E-12   96.6  16.0   63  668-737   312-375 (376)
125 d1tcaa_ c.69.1.17 (A:) Triacyl  98.8 1.8E-08 1.3E-12   97.9  11.9   83  545-637    51-136 (317)
126 d1nexb2 b.69.4.1 (B:370-744) C  98.8 2.3E-06 1.7E-10   85.2  28.6  283   37-464    18-316 (355)
127 d2p4oa1 b.68.6.3 (A:4-305) Hyp  98.8   2E-06 1.5E-10   84.2  27.1  246   20-370    17-272 (302)
128 d2dg1a1 b.68.6.1 (A:6-324) Lac  98.7 3.5E-06 2.5E-10   83.0  26.4  239   33-371    42-294 (319)
129 d1pjxa_ b.68.6.1 (A:) Diisopro  98.7 6.5E-06 4.8E-10   80.7  27.9  234  157-460    46-299 (314)
130 d1jofa_ b.69.10.1 (A:) 3-carbo  98.7 3.3E-06 2.4E-10   85.0  26.0   72  244-332   147-224 (365)
131 d2p4oa1 b.68.6.3 (A:4-305) Hyp  98.6 4.9E-06 3.6E-10   81.3  25.7  220  157-458    49-294 (302)
132 d2ovrb2 b.69.4.1 (B:2365-2706)  98.6 2.3E-05 1.7E-09   77.1  31.1  158  246-459   180-339 (342)
133 d1qnia2 b.69.3.1 (A:10-450) Ni  98.6 2.5E-08 1.8E-12  101.1   7.9  209  176-460    73-289 (441)
134 d1ex9a_ c.69.1.18 (A:) Lipase   98.6   1E-07 7.6E-12   91.9  11.5   80  545-636    30-109 (285)
135 d1mo2a_ c.69.1.22 (A:) Erythro  98.6 2.8E-07   2E-11   87.7  14.1  164  553-737    69-254 (255)
136 d1nexb2 b.69.4.1 (B:370-744) C  98.6 1.3E-05 9.1E-10   79.6  26.8   84    4-106    32-116 (355)
137 d2dsta1 c.69.1.39 (A:2-123) Hy  98.5 8.7E-08 6.3E-12   78.3   8.1   96  488-624     7-102 (122)
138 d1xkta_ c.69.1.22 (A:) Fatty a  98.5 1.1E-07 7.9E-12   92.2  10.6   68  554-633    49-116 (286)
139 d1llfa_ c.69.1.17 (A:) Type-B   98.5 4.9E-08 3.6E-12  104.5   6.4  132  494-635    98-243 (534)
140 d1thga_ c.69.1.17 (A:) Type-B   98.5 4.3E-08 3.1E-12  105.1   5.9  131  494-635   106-251 (544)
141 d2h7ca1 c.69.1.1 (A:1021-1553)  98.5 1.3E-07 9.6E-12  101.2   9.1  125  494-636    97-230 (532)
142 d1qe3a_ c.69.1.1 (A:) Thermoph  98.4 1.2E-07   9E-12  100.0   8.4  128  494-636    82-217 (483)
143 d1pjxa_ b.68.6.1 (A:) Diisopro  98.4 1.5E-05 1.1E-09   78.0  23.3  238    7-333    48-300 (314)
144 d2bcea_ c.69.1.1 (A:) Bile-sal  98.4 1.1E-07 7.9E-12  102.8   7.0  135  494-635    81-222 (579)
145 d1ea5a_ c.69.1.1 (A:) Acetylch  98.4 1.6E-07 1.2E-11  100.5   8.2  129  494-637    92-227 (532)
146 d1ijqa1 b.68.5.1 (A:377-642) L  98.4   6E-05 4.3E-09   71.5  25.8  227   61-409     9-244 (266)
147 d2ghsa1 b.68.6.1 (A:20-314) Re  98.4 4.4E-05 3.2E-09   73.8  25.2  138  157-332    40-179 (295)
148 d2ha2a1 c.69.1.1 (A:1-542) Ace  98.4 1.5E-07 1.1E-11  100.9   7.7  126  494-636    97-232 (542)
149 d1ijqa1 b.68.5.1 (A:377-642) L  98.4 0.00016 1.2E-08   68.3  28.4  226  157-465    10-243 (266)
150 d1npea_ b.68.5.1 (A:) Nidogen   98.4 6.6E-05 4.8E-09   70.9  24.5  240   42-411     1-246 (263)
151 d1ukca_ c.69.1.17 (A:) Esteras  98.4 2.5E-07 1.8E-11   98.4   7.9  130  494-637    81-221 (517)
152 d1p0ia_ c.69.1.1 (A:) Butyryl   98.3 3.3E-07 2.4E-11   97.8   8.4  129  494-637    90-225 (526)
153 d1sq9a_ b.69.4.1 (A:) Antivira  98.3 4.1E-06   3E-10   85.5  16.1  132  157-313   205-351 (393)
154 d2hu7a1 b.69.7.2 (A:9-321) Acy  98.3 0.00037 2.7E-08   59.9  24.8  193   41-333    24-220 (313)
155 d1npea_ b.68.5.1 (A:) Nidogen   98.3 0.00026 1.9E-08   66.6  26.7  226  157-467    10-245 (263)
156 d2ghsa1 b.68.6.1 (A:20-314) Re  98.3 3.8E-05 2.8E-09   74.2  21.0  227    5-332    40-285 (295)
157 d1dx4a_ c.69.1.1 (A:) Acetylch  98.3 7.5E-07 5.5E-11   95.9   9.1  117  509-637   136-266 (571)
158 d1pgua2 b.69.4.1 (A:327-613) A  98.2 7.6E-06 5.5E-10   79.0  14.4  141  179-370   123-276 (287)
159 d1yfqa_ b.69.4.2 (A:) Cell cyc  98.2 0.00017 1.2E-08   70.4  24.2   74   88-222    13-92  (342)
160 d1pgua2 b.69.4.1 (A:327-613) A  98.2 4.9E-05 3.6E-09   73.1  19.4  122  175-327   163-285 (287)
161 d1sq9a_ b.69.4.1 (A:) Antivira  98.1 1.4E-05   1E-09   81.3  15.3  144   33-255   187-349 (393)
162 d2ovrb2 b.69.4.1 (B:2365-2706)  98.0 0.00018 1.3E-08   70.3  21.5  135  157-332   197-340 (342)
163 d1rp1a2 c.69.1.19 (A:1-336) Pa  97.8   1E-05 7.3E-10   78.0   6.9  106  512-635    70-179 (337)
164 d1rwia_ b.68.9.1 (A:) Serine/t  97.8  0.0052 3.8E-07   57.4  25.6  114  175-333    98-213 (260)
165 d1bu8a2 c.69.1.19 (A:1-336) Pa  97.7 2.2E-05 1.6E-09   75.4   7.1  108  511-635    69-180 (338)
166 d1p22a2 b.69.4.1 (A:253-545) F  97.6  0.0049 3.6E-07   57.9  23.4   54   37-106    20-73  (293)
167 d1ei9a_ c.69.1.13 (A:) Palmito  97.4 0.00015 1.1E-08   67.9   8.6   52  584-636    64-116 (279)
168 g1wht.1 c.69.1.5 (A:,B:) Serin  97.4  0.0028   2E-07   63.7  18.9  149  484-637    25-188 (409)
169 d1q7fa_ b.68.9.1 (A:) Brain tu  97.2   0.065 4.7E-06   50.1  24.9  132  157-332    93-231 (279)
170 d1rwia_ b.68.9.1 (A:) Serine/t  97.1   0.037 2.7E-06   51.3  22.2  131  157-332   119-254 (260)
171 d1fwxa2 b.69.3.1 (A:8-451) Nit  97.0 0.00092 6.7E-08   65.2   9.3  121   33-196    85-214 (459)
172 d1p22a2 b.69.4.1 (A:253-545) F  97.0    0.13 9.8E-06   47.3  25.5   51  157-222    35-88  (293)
173 d1wpxa1 c.69.1.5 (A:1-421) Ser  96.9   0.024 1.7E-06   56.9  19.8  141  491-637    27-180 (421)
174 d1ac5a_ c.69.1.5 (A:) Serine c  96.8   0.015 1.1E-06   59.5  17.3   64  672-738   372-468 (483)
175 d1fwxa2 b.69.3.1 (A:8-451) Nit  96.5   0.019 1.4E-06   55.7  14.4  108  183-316    96-211 (459)
176 g1gxs.1 c.69.1.5 (A:,B:) Hydro  96.5    0.12 8.4E-06   51.8  21.3  149  484-636    26-188 (425)
177 d2hu7a1 b.69.7.2 (A:9-321) Acy  96.4   0.075 5.4E-06   45.5  15.6  117   36-224   107-225 (313)
178 d1ivya_ c.69.1.5 (A:) Human 'p  95.9    0.11   8E-06   52.5  17.5  144  488-637    28-182 (452)
179 d1ku0a_ c.69.1.18 (A:) Lipase   95.8  0.0082   6E-07   58.6   7.8   36  601-636   105-165 (388)
180 d1q7fa_ b.68.9.1 (A:) Brain tu  95.7    0.77 5.6E-05   42.2  23.0  116  157-311   135-257 (279)
181 d1crua_ b.68.2.1 (A:) Soluble   95.0       2 0.00014   42.5  26.6   61  175-252    27-87  (450)
182 d1v04a_ b.68.6.2 (A:) Serum pa  93.8       1 7.5E-05   42.7  16.9  162    5-218    68-237 (340)
183 d1k3ia3 b.69.1.1 (A:151-537) G  93.7     3.2 0.00023   39.7  25.4  138   33-226    22-164 (387)
184 d1lgya_ c.69.1.17 (A:) Triacyl  93.0    0.07 5.1E-06   49.0   6.5   41  579-621   113-153 (265)
185 d1tiaa_ c.69.1.17 (A:) Triacyl  92.4   0.076 5.6E-06   49.0   5.9   41  579-621   117-157 (271)
186 d1uwca_ c.69.1.17 (A:) Feruloy  92.3   0.098 7.1E-06   47.9   6.4   40  580-621   106-145 (261)
187 d1tiba_ c.69.1.17 (A:) Triacyl  92.3   0.098 7.2E-06   48.2   6.5   40  580-621   119-158 (269)
188 d1crua_ b.68.2.1 (A:) Soluble   91.9     3.6 0.00026   40.5  18.6   36  157-192    48-97  (450)
189 d3tgla_ c.69.1.17 (A:) Triacyl  91.8    0.12 8.6E-06   47.5   6.5   41  579-621   112-152 (265)
190 d1v04a_ b.68.6.2 (A:) Serum pa  86.6      13 0.00092   34.7  18.6   79  244-332   152-237 (340)
191 d1cexa_ c.69.1.30 (A:) Cutinas  86.3       2 0.00015   36.7   9.9   55  579-635    76-134 (197)
192 d1k3ia3 b.69.1.1 (A:151-537) G  85.7      15  0.0011   34.6  23.2   83    6-104    53-137 (387)
193 d1utca2 b.69.6.1 (A:4-330) Cla  84.8      14 0.00099   33.4  27.8  142  158-333    84-233 (327)
194 d1qoza_ c.69.1.30 (A:) Acetylx  76.0     2.2 0.00016   36.8   6.3   54  580-635    63-134 (207)
195 d1g66a_ c.69.1.30 (A:) Acetylx  74.7     3.5 0.00026   35.5   7.3   55  580-636    63-135 (207)
196 d1utca2 b.69.6.1 (A:4-330) Cla  69.0      40  0.0029   30.3  27.5  141    5-227    45-194 (327)
197 d2d81a1 c.69.1.37 (A:21-338) P  64.7     4.4 0.00032   37.5   6.0   31  491-522   201-231 (318)
198 d1h6la_ b.68.3.1 (A:) Thermost  56.8      74  0.0054   29.2  20.8  149  157-332    50-210 (353)
199 d1ivya_ c.69.1.5 (A:) Human 'p  52.3     7.9 0.00058   37.9   5.9   63  672-737   361-448 (452)
200 d1pexa_ b.66.1.1 (A:) Collagen  49.9      64  0.0047   26.5  10.7   86    8-104    28-119 (192)
201 d1zgka1 b.68.11.1 (A:322-609)   48.5      82  0.0059   27.3  19.4   91    4-104    18-108 (288)
202 d1tl2a_ b.67.1.1 (A:) Tachylec  40.5      92  0.0067   25.6  10.2   56   32-104    41-103 (235)
203 d1tl2a_ b.67.1.1 (A:) Tachylec  39.3      97   0.007   25.5  12.3   99  243-368    41-150 (235)
204 d1zgka1 b.68.11.1 (A:322-609)   35.1 1.3E+02  0.0095   25.7  21.4   24   59-82     16-39  (288)
205 d1sgva1 b.122.1.1 (A:236-292)   28.7      48  0.0035   21.1   4.6   18   33-50     27-44  (57)
206 d1h6la_ b.68.3.1 (A:) Thermost  25.5 2.3E+02   0.017   25.6  19.8   18   61-78     49-66  (353)
207 d1pjaa_ c.69.1.13 (A:) Palmito  24.6      55   0.004   27.6   6.4   46  672-722     2-47  (268)
208 d1iaya_ c.67.1.4 (A:) 1-aminoc  23.8 1.7E+02   0.013   27.1  10.5   50  585-636    88-142 (428)
209 d1kb0a2 b.70.1.1 (A:1-573) Qui  23.1 3.2E+02   0.024   26.4  20.1   57  394-460   498-567 (573)
210 d1ispa_ c.69.1.18 (A:) Lipase   22.0      62  0.0045   26.0   5.7   37  673-714     3-39  (179)
211 d1m7ya_ c.67.1.4 (A:) 1-aminoc  21.7 2.9E+02   0.021   25.4  12.2   45  590-636    95-143 (431)

No 1  
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.96  E-value=1.1e-28  Score=243.53  Aligned_cols=242  Identities=18%  Similarity=0.187  Sum_probs=190.9

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      ...+.+.|++.+|.+|+++++.|++.    +++.|+||++|||++....         ..+    ......|+++||+|+
T Consensus        10 ~~~~~v~~~s~dG~~i~~~l~~p~~~----~~~~Pviv~~HGG~~~~~~---------~~~----~~~~~~la~~G~~v~   72 (260)
T d2hu7a2          10 AGSRLVWVESFDGSRVPTYVLESGRA----PTPGPTVVLVHGGPFAEDS---------DSW----DTFAASLAAAGFHVV   72 (260)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEETTS----CSSEEEEEEECSSSSCCCC---------SSC----CHHHHHHHHHTCEEE
T ss_pred             CceEEEEEECCCCCEEEEEEEeCCCC----CCCceEEEEECCCCccCCC---------ccc----cHHHHHHHhhccccc
Confidence            46788999999999999999999762    3468999999997643211         111    245678899999999


Q ss_pred             EcCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          559 AGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      +++++...++|....   ...+....++|+..+++++.++.  +..+++++|+|+||.+++.++..+|+.++++++.+|.
T Consensus        73 ~~d~r~~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~  150 (260)
T d2hu7a2          73 MPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASV  150 (260)
T ss_dssp             EECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCC
T ss_pred             cceeeeccccccccccccccccchhhhhhhccccccccccc--ccceeeccccccccccccchhccCCcccccccccccc
Confidence            977765555544311   11223456789999999999875  5679999999999999999999999999999999998


Q ss_pred             CCCCCCccCcc-----cccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475          636 YNKTLTPFGFQ-----TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV  710 (751)
Q Consensus       636 ~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~  710 (751)
                      .+.........     ......+...+.+...++..+++++++|+|++||+.|.+||  +.++.+++++|++++++++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp--~~~~~~~~~~l~~~~~~~~~~  228 (260)
T d2hu7a2         151 VDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTP--LKPLLRLMGELLARGKTFEAH  228 (260)
T ss_dssp             CCHHHHHHTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred             hhhhhhhcccccccccccccccccccccccccchhhcccccCCCceeeecccCceec--HHHHHHHHHHHHHCCCCeEEE
Confidence            66321100000     00111224466788889999999999999999999999999  999999999999999999999


Q ss_pred             EeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          711 LLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       711 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      +||+++|.+...++..+++..+++||.++++
T Consensus       229 ~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~  259 (260)
T d2hu7a2         229 IIPDAGHAINTMEDAVKILLPAVFFLATQRE  259 (260)
T ss_dssp             EETTCCSSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECcCCCCCCChHhHHHHHHHHHHHHHHHhc
Confidence            9999999998778888899999999999986


No 2  
>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.96  E-value=1.3e-28  Score=242.72  Aligned_cols=248  Identities=21%  Similarity=0.256  Sum_probs=190.3

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCc-hHHHHHHhCCeEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAV  557 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~v  557 (751)
                      ++.|++.|...+|.++.+.+++|+++++++  ++|+||++|||++...           ....+.. .....++++||+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~k--k~P~iv~~HGGp~~~~-----------~~~~~~~~~~~~~~a~~g~~V   67 (258)
T d2bgra2           1 MPSKKLDFIILNETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQK-----------ADTVFRLNWATYLASTENIIV   67 (258)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECTTCCTTS--CEEEEEECCCCTTCCC-----------CCCCCCCSHHHHHHHTTCCEE
T ss_pred             CCceeEEEEEeCCcEEEEEEEECCCcCCCC--CeeEEEEEcCCCCccc-----------CCCccCcCHHHHHHhcCCcEE
Confidence            357899999999999999999999987655  5999999999743211           1111111 2334567899999


Q ss_pred             EEcCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475          558 LAGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG  634 (751)
Q Consensus       558 ~~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~  634 (751)
                      +.+++++..+.+..   .....+......++..+++++.++..+|+++|+++|+|+||.+++.++..+|+.+.+++..++
T Consensus        68 ~~~d~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~  147 (258)
T d2bgra2          68 ASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAP  147 (258)
T ss_dssp             EEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESC
T ss_pred             EeecccccCCcchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeec
Confidence            99777654443321   111122334577888999999999999999999999999999999999999999998888887


Q ss_pred             CCCCCCCccCcc---cccccchhhHHHHHhcCcccccCCCC-CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 004475          635 SYNKTLTPFGFQ---TEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV  710 (751)
Q Consensus       635 ~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~  710 (751)
                      ............   ......+...+.+...+++..+++++ +|+|++||++|.+||  +.++.+++++|+++|++++++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp--~~~s~~~~~~l~~~g~~~~~~  225 (258)
T d2bgra2         148 VSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAM  225 (258)
T ss_dssp             CCCGGGSBHHHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHHTCCCEEE
T ss_pred             ccccccccccccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCccc--HHHHHHHHHHHHHCCCCEEEE
Confidence            654322211000   01122334566777888888888765 899999999999999  999999999999999999999


Q ss_pred             EeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          711 LLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       711 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      +||+++|++...+....+.+.+.+||+++|.
T Consensus       226 ~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~  256 (258)
T d2bgra2         226 WYTDEDHGIASSTAHQHIYTHMSHFIKQCFS  256 (258)
T ss_dssp             EETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCCCCCCCCccHHHHHHHHHHHHHHHhc
Confidence            9999999987777778889999999999986


No 3  
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=5.5e-28  Score=238.19  Aligned_cols=239  Identities=17%  Similarity=0.190  Sum_probs=172.6

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|.++.+++++|.++++++  ++|+||++||||+....        .+.+..  ......|+++||+|+++|+++..++
T Consensus        10 ~dg~~l~~~l~~P~~~~~~~--k~Pviv~~HGGp~~~~~--------~~~~~~--~~~~~~la~~G~~vv~~d~rGs~~~   77 (258)
T d1xfda2          10 IDDYNLPMQILKPATFTDTT--HYPLLLVVDGTPGSQSV--------AEKFEV--SWETVMVSSHGAVVVKCDGRGSGFQ   77 (258)
T ss_dssp             ETTEEECCBEEBCSSCCSSS--CEEEEEECCCCTTCCCC--------CCCCCC--SHHHHHHHTTCCEEECCCCTTCSSS
T ss_pred             eCCeEEEEEEEECCCcCCCC--ceeEEEEEcCCccccCc--------CCCcCc--chHHHHHhcCCcEEEEecccccccc
Confidence            48999999999999887655  49999999997532110        011111  1335578899999999777655554


Q ss_pred             CCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEEEEccCCCCCCCC
Q 004475          569 GDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKTLT  641 (751)
Q Consensus       569 g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~d~~~~  641 (751)
                      |..   .....+......|+.++++++.+++.+|++||+++|+|+||++|+.++...++    .+++.+...+.......
T Consensus        78 g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (258)
T d1xfda2          78 GTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY  157 (258)
T ss_dssp             HHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS
T ss_pred             chhHhhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecc
Confidence            432   11122234558899999999999999999999999999999999998877654    46777777765443221


Q ss_pred             ccCc-ccccccchhhHHHHHhcCcccccCCC-CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475          642 PFGF-QTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY  719 (751)
Q Consensus       642 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~  719 (751)
                      .... ......+....+.+...++..++.++ ++|+|++||+.|.+||  +.++.+++++|++.+++++++++|+++|.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp--~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~  235 (258)
T d1xfda2         158 ASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYF  235 (258)
T ss_dssp             BHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSC
T ss_pred             ccccccccccccccchHHhhccchhhhhhhhhcccccccccCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Confidence            1000 00001111122334444555556664 6899999999999999  999999999999999999999999999998


Q ss_pred             CccccHHHHHHHHHHHHHHHhc
Q 004475          720 AARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       720 ~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      ........+.+.+++||+++|+
T Consensus       236 ~~~~~~~~~~~~~~~f~~~~~~  257 (258)
T d1xfda2         236 TSSSLKQHLYRSIINFFVECFR  257 (258)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCcCHHHHHHHHHHHHHHhhC
Confidence            7666677788999999999885


No 4  
>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}
Probab=99.92  E-value=2.7e-24  Score=221.02  Aligned_cols=236  Identities=18%  Similarity=0.205  Sum_probs=169.1

Q ss_pred             ccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe
Q 004475          476 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF  555 (751)
Q Consensus       476 ~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  555 (751)
                      +.....|.+.++. +|..+.++++.|++     .+++|+||++||.+               +...........|+++||
T Consensus       101 ~~~~~~e~v~ip~-dg~~l~g~l~~P~~-----~~~~P~Vi~~hG~~---------------~~~e~~~~~~~~l~~~G~  159 (360)
T d2jbwa1         101 LLSPPAERHELVV-DGIPMPVYVRIPEG-----PGPHPAVIMLGGLE---------------STKEESFQMENLVLDRGM  159 (360)
T ss_dssp             GSSSCEEEEEEEE-TTEEEEEEEECCSS-----SCCEEEEEEECCSS---------------CCTTTTHHHHHHHHHTTC
T ss_pred             hCCCCeEEeecCc-CCcccceEEEecCC-----CCCceEEEEeCCCC---------------ccHHHHHHHHHHHHhcCC
Confidence            3446789999984 78899999999976     45699999999952               111222355678899999


Q ss_pred             EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      +|++   ++++|+|.+........+...++..+++++..+..+|++||+|+|+||||++|+.+|+..| +++++|+.+++
T Consensus       160 ~vl~---~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~  235 (360)
T d2jbwa1         160 ATAT---FDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGF  235 (360)
T ss_dssp             EEEE---ECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred             EEEE---EccccccccCccccccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEccc
Confidence            9999   5556776654322222233345667889999998899999999999999999999999986 68999999998


Q ss_pred             CCCCCCccCccccc-------cc-chh--hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC
Q 004475          636 YNKTLTPFGFQTEF-------RT-LWE--ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA  705 (751)
Q Consensus       636 ~d~~~~~~~~~~~~-------~~-~~~--~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~  705 (751)
                      .+............       .. ...  ........+....+.++++|+|++||++|. +|  +.++..+++.+..  .
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp--~~~~~~l~~~~~~--~  310 (360)
T d2jbwa1         236 SDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPA--E  310 (360)
T ss_dssp             SCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCG--G
T ss_pred             ccHHHHhhhhhhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cC--HHHHHHHHHhcCC--C
Confidence            76432211100000       00 000  112223445555678899999999999998 67  8999999988754  3


Q ss_pred             cEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475          706 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN  743 (751)
Q Consensus       706 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~  743 (751)
                      +++++++++++|...  .........+.+||.++|...
T Consensus       311 ~~~l~~~~~g~H~~~--~~~~~~~~~i~dWl~~~L~~g  346 (360)
T d2jbwa1         311 HLNLVVEKDGDHCCH--NLGIRPRLEMADWLYDVLVAG  346 (360)
T ss_dssp             GEEEEEETTCCGGGG--GGTTHHHHHHHHHHHHHHTSS
T ss_pred             CeEEEEECCCCcCCC--cChHHHHHHHHHHHHHHhccC
Confidence            578899999999753  333466778999999998643


No 5  
>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]}
Probab=99.90  E-value=9.6e-23  Score=207.78  Aligned_cols=233  Identities=15%  Similarity=0.167  Sum_probs=166.5

Q ss_pred             ccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe
Q 004475          476 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF  555 (751)
Q Consensus       476 ~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  555 (751)
                      .+.++.+.++|++.+|.+|.++++.|.+.    ++++|+||++||++....            +    ......++++||
T Consensus        50 ~~~~~~~~v~~~s~dG~~l~~~l~~P~~~----~~~~P~Vv~~hG~~~~~~------------~----~~~~~~~a~~G~  109 (322)
T d1vlqa_          50 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGRG------------F----PHDWLFWPSMGY  109 (322)
T ss_dssp             CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCCC------------C----GGGGCHHHHTTC
T ss_pred             CCCeEEEEEEEECCCCcEEEEEEEeccCC----CCCccEEEEecCCCCCcC------------c----HHHHHHHHhCCC
Confidence            44567889999999999999999999763    346899999999753210            1    122346789999


Q ss_pred             EEEEcCCCCCCCCCCCCC---------------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Q 004475          556 AVLAGPSIPIIGEGDKLP---------------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGH  608 (751)
Q Consensus       556 ~v~~~~~~~~~g~g~~~~---------------------------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~  608 (751)
                      +|+++|++   |+|.+..                           ........+.|+..+++++..++.+|+++|+++|+
T Consensus       110 ~v~~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~  186 (322)
T d1vlqa_         110 ICFVMDTR---GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGG  186 (322)
T ss_dssp             EEEEECCT---TCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred             EEEEeecc---ccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhcccccc
Confidence            99995554   4443211                           11233456789999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC----cc-cc--------cccchhhHHHHHhcCcccccCCCCCCE
Q 004475          609 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG----FQ-TE--------FRTLWEATNVYIEMSPITHANKIKKPI  675 (751)
Q Consensus       609 S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~----~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~P~  675 (751)
                      |+||.+++.++...| +++++++..+..........    .. ..        ........+.+...++..++.++++|+
T Consensus       187 S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~  265 (322)
T d1vlqa_         187 SQGGGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPA  265 (322)
T ss_dssp             THHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCE
T ss_pred             ccchHHHHHHHhcCC-CccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCE
Confidence            999999999998884 68888888776442110000    00 00        000001123345568888899999999


Q ss_pred             EEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          676 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       676 li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      |++||++|.++|  +.++.++++++   +.++++++||+++|....    .......++||+++|.
T Consensus       266 Lv~~G~~D~~vp--~~~~~~~~~~~---~~~~~l~~~p~~~H~~~~----~~~~~~~~~~l~~~l~  322 (322)
T d1vlqa_         266 LFSVGLMDNICP--PSTVFAAYNYY---AGPKEIRIYPYNNHEGGG----SFQAVEQVKFLKKLFE  322 (322)
T ss_dssp             EEEEETTCSSSC--HHHHHHHHHHC---CSSEEEEEETTCCTTTTH----HHHHHHHHHHHHHHHC
T ss_pred             EEEEeCCCCCcC--HHHHHHHHHHC---CCCeEEEEECCCCCCCcc----ccCHHHHHHHHHHHhC
Confidence            999999999999  88887777654   567899999999997532    2233456799999873


No 6  
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.89  E-value=7e-22  Score=196.85  Aligned_cols=250  Identities=16%  Similarity=0.161  Sum_probs=173.6

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      +++|+|+|++.||.+|+++|+.|+++++++  ++|+||++|||++.....            .+.......++..++.++
T Consensus         5 y~~e~v~~~s~DG~~i~~~l~~P~~~~~~~--~~P~iv~~HGG~~~~~~~------------~~~~~~~~~~~~~~~~~~   70 (280)
T d1qfma2           5 YQTVQIFYPSKDGTKIPMFIVHKKGIKLDG--SHPAFLYGYGGFNISITP------------NYSVSRLIFVRHMGGVLA   70 (280)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEETTCCCSS--CSCEEEECCCCTTCCCCC------------CCCHHHHHHHHHHCCEEE
T ss_pred             CEEEEEEEECCCCCEEEEEEEEcCCCCCCC--CeEEEEEECCCCcccCCC------------Ccchhhhhhhcccceeee
Confidence            467899999999999999999999876544  599999999987543211            112233445566788887


Q ss_pred             EcCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          559 AGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       559 ~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      ...+......+..   ............+...+..+...+..++...++++|+|.||.++..++...++.+++++...+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~  150 (280)
T d1qfma2          71 VANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGV  150 (280)
T ss_dssp             EECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred             ccccccccccchhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccc
Confidence            7554333222111   1112233444566667777777777778889999999999999999999999999999999988


Q ss_pred             CCCCCCccCccc-------ccccchhhHHHHHhcCcc------cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh
Q 004475          636 YNKTLTPFGFQT-------EFRTLWEATNVYIEMSPI------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG  702 (751)
Q Consensus       636 ~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~  702 (751)
                      .+..........       .....+.....+...++.      ..+.....|+||+||++|.+||  +.++++++++|++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp--~~~s~~l~~aL~~  228 (280)
T d1qfma2         151 MDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQY  228 (280)
T ss_dssp             CCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHH
T ss_pred             cchhhhccccccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCC--HHHHHHHHHHHHH
Confidence            764322110000       011112222333333333      3334445689999999999999  9999999999964


Q ss_pred             -------CCCcEEEEEeCCCCCcCCccc-cHHHHHHHHHHHHHHHhcCCC
Q 004475          703 -------HGALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLSNT  744 (751)
Q Consensus       703 -------~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~~l~~~~  744 (751)
                             .+++++++++|+++|++.... +..+.+.++++||+++|+...
T Consensus       229 ~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~~  278 (280)
T d1qfma2         229 IVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDW  278 (280)
T ss_dssp             HTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence                   478899999999999986443 234566788999999998654


No 7  
>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]}
Probab=99.89  E-value=1.1e-22  Score=206.84  Aligned_cols=232  Identities=15%  Similarity=0.131  Sum_probs=168.3

Q ss_pred             ccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCe
Q 004475          476 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF  555 (751)
Q Consensus       476 ~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  555 (751)
                      .+.+..++++|++.+|.+|.++++.|.+     ++++|+||++||++...               ......+..|+++||
T Consensus        51 ~~~~~~~~v~~~~~dg~~i~~~l~~P~~-----~~~~P~vv~~HG~~~~~---------------~~~~~~~~~la~~Gy  110 (318)
T d1l7aa_          51 ADGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY---------------DGEIHEMVNWALHGY  110 (318)
T ss_dssp             CSSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS---------------GGGHHHHHHHHHTTC
T ss_pred             CCCeEEEEEEEECCCCcEEEEEEEecCC-----CCCceEEEEecCCCCCc---------------cchHHHHHHHHHCCC
Confidence            3456788999999999999999999986     45799999999974211               112245668899999


Q ss_pred             EEEEcCCCCCCCCCCCCCC--------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004475          556 AVLAGPSIPIIGEGDKLPN--------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT  615 (751)
Q Consensus       556 ~v~~~~~~~~~g~g~~~~~--------------------~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a  615 (751)
                      +|+++|   .+|+|.+...                    .......+.|...+++++..++.+++.+|+++|+|+||.++
T Consensus       111 ~vi~~D---~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~  187 (318)
T d1l7aa_         111 ATFGML---VRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLT  187 (318)
T ss_dssp             EEEEEC---CTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHH
T ss_pred             EEEEEe---eCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHH
Confidence            999944   4555554211                    11233557889999999999999999999999999999999


Q ss_pred             HHHHHhCCCceeEEEEccCCCCCCCC--------ccCc----ccccccchhh---HHHHHhcCcccccCCCCCCEEEEEc
Q 004475          616 AHLLAHAPHLFCCGIARSGSYNKTLT--------PFGF----QTEFRTLWEA---TNVYIEMSPITHANKIKKPILIIHG  680 (751)
Q Consensus       616 ~~~a~~~p~~~~~~v~~~~~~d~~~~--------~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~li~~G  680 (751)
                      +..+...+ +++++++..+.......        ....    .......+..   ........+...++++++|+|++||
T Consensus       188 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G  266 (318)
T d1l7aa_         188 IAAAALSD-IPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIG  266 (318)
T ss_dssp             HHHHHHCS-CCSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEE
T ss_pred             HHHhhcCc-ccceEEEeccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEE
Confidence            99999985 56666766665331100        0000    0000011111   1122344566678899999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          681 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       681 ~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      ++|.+||  +.++.++++++   +.++++++||+++|.+.     .+..+++++||+++|+
T Consensus       267 ~~D~~vp--~~~~~~~~~~l---~~~~~l~~~~~~gH~~~-----~~~~~~~~~fl~~~Lk  317 (318)
T d1l7aa_         267 LIDKVTP--PSTVFAAYNHL---ETKKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK  317 (318)
T ss_dssp             TTCSSSC--HHHHHHHHHHC---CSSEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred             CCCCCcC--HHHHHHHHHHc---CCCcEEEEECCCCCCCc-----HHHHHHHHHHHHHhCC
Confidence            9999999  99998888776   45789999999999763     3677889999999997


No 8  
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=3.1e-21  Score=204.91  Aligned_cols=356  Identities=11%  Similarity=-0.014  Sum_probs=218.9

Q ss_pred             eeEEeecCCCCCCCCcccccCCCCc--ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            6 GIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~~~~~--~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      +|+++++.+    ++.+.+......  .......|||||++|+|..+..+.-+ ......+|++++.+++.++|+.....
T Consensus        38 ~i~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r-~s~~~~~~i~d~~~~~~~~l~~~~~~  112 (465)
T d1xfda1          38 TVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ-HSYTGYYVLSKIPHGDPQSLDPPEVS  112 (465)
T ss_dssp             CEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS-SCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred             cEEEEECCC----CCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeE-eeccccEEEEEccCCceeeccCccCC
Confidence            789999988    888765432221  14567789999999999764322111 24568999999999999999654322


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                      .  ..+..+.|||||+.|+|...                                                  .+||+++
T Consensus       113 ~--~~l~~~~wSPDG~~iafv~~--------------------------------------------------~nl~~~~  140 (465)
T d1xfda1         113 N--AKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYCA  140 (465)
T ss_dssp             S--CCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEES
T ss_pred             c--cccceeeeccCCceEEEEec--------------------------------------------------ceEEEEe
Confidence            1  12456899999999999843                                                  5899998


Q ss_pred             C-CCCceecCCC---ce-----------------EEeeeeCCCCceEEEEEecCCcc--cccc-----------------
Q 004475          164 L-DGTAKDFGTP---AV-----------------YTAVEPSPDQKYVLITSMHRPYS--YKVP-----------------  203 (751)
Q Consensus       164 ~-~G~~~~lt~~---~~-----------------~~~~~~SpDG~~i~~~~~~~~~~--~~~~-----------------  203 (751)
                      . +|+..++|..   ..                 ...+.|||||++|+|.+.+....  +..+                 
T Consensus       141 ~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~  220 (465)
T d1xfda1         141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK  220 (465)
T ss_dssp             SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred             cCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccc
Confidence            8 5566666643   11                 13566999999999987654210  0000                 


Q ss_pred             cCCC--ceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeec
Q 004475          204 CARF--SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQ  281 (751)
Q Consensus       204 ~~~~--~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~  281 (751)
                      .+..  ...|+++|++++....+...+..      .......+..+.|+||++. ++....        +......|+++
T Consensus       221 ~G~~np~~~l~v~d~~~~~~~~~~~~~~~------~~~~~~y~~~~~W~~d~~~-~~~~~n--------R~q~~~~i~~~  285 (465)
T d1xfda1         221 AGSENPSISLHVIGLNGPTHDLEMMPPDD------PRMREYYITMVKWATSTKV-AVTWLN--------RAQNVSILTLC  285 (465)
T ss_dssp             TTSCCCEEEEEEEESSSSCCCEECCCCCC------GGGSSEEEEEEEESSSSEE-EEEEEE--------TTSCEEEEEEE
T ss_pred             cCCCCCceeEEEEecCCCcEEEEEeccCc------CccccceeeeeEEcCCCeE-EEEEEc--------cccccceEEEE
Confidence            0111  13688899887654432221111      1111223457899999975 333221        11223468888


Q ss_pred             cCCCCCCCCceEeEe-ece-----eEE-EEEecCCceEEEeeee-cccceeEEEecCCC-----CCCcceeeeecccccc
Q 004475          282 PAEPAEGEKPEILHK-LDL-----RFS-VSWCDDSLALVNETWY-KTSQTRTWLVCPGS-----KDVAPRVLFDRVFENV  348 (751)
Q Consensus       282 ~~~~~~~~~~~~l~~-~~~-----~~~-~~~spdg~~l~~~~~~-~~~~~~l~~~~~~~-----~~~~~~~l~~~~~~~~  348 (751)
                      +..   ++..+.+.. ...     ... +.|+|||+.++|.... .++..++|.+.+.+     .....++||.+...-.
T Consensus       286 d~~---tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~  362 (465)
T d1xfda1         286 DAT---TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVT  362 (465)
T ss_dssp             ETT---TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEE
T ss_pred             cCC---CCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEE
Confidence            875   445444433 211     224 8999999998775421 23445677664321     1134467776544311


Q ss_pred             cCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCC
Q 004475          349 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ  428 (751)
Q Consensus       349 ~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~  428 (751)
                      .      .++|+.+++.|+|.+..                ....+.+||++++.++...++......   +     ..+.
T Consensus       363 ~------i~~~d~~~~~vyF~a~~----------------~~p~~~hly~v~l~g~~~~~~lt~~~~---~-----~~~~  412 (465)
T d1xfda1         363 K------ILAYDEKGNKIYFLSTE----------------DLPRRRQLYSANTVGNFNRQCLSCDLV---E-----NCTY  412 (465)
T ss_dssp             E------EEEEETTTTEEEEEESS----------------SCTTCCEEEEECSSTTCCCBCSSTTSS---S-----SCCC
T ss_pred             E------EEEEcCCCCEEEEEEeC----------------CCCCceEEEEEECCCCCcceeeccccC---C-----CCCE
Confidence            1      15689999999998832                124567999999987654333221110   0     1123


Q ss_pred             cceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 004475          429 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT  467 (751)
Q Consensus       429 ~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt  467 (751)
                      +.++|||||++++.+.+++..|. +.+++..+++..+..
T Consensus       413 ~~~~~S~~~~y~v~~~s~~~~P~-~~~~~~~~~~~~~~L  450 (465)
T d1xfda1         413 FSASFSHSMDFFLLKCEGPGVPM-VTVHNTTDKKKMFDL  450 (465)
T ss_dssp             CEEEECTTSSEEEEECCSSSSCC-EEEEETTTCCEEEEE
T ss_pred             EEEEECCCCCEEEEEeecCCCCe-EEEEECCCCCEEEEE
Confidence            45789999999999998887654 777787777765443


No 9  
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.89  E-value=3.7e-21  Score=190.29  Aligned_cols=252  Identities=17%  Similarity=0.190  Sum_probs=173.3

Q ss_pred             CeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCC
Q 004475           43 KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGP  122 (751)
Q Consensus        43 ~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~  122 (751)
                      .+|||++..+.    .....+||++|.+|+..++|+.....     +..|+|||||++|||.+....             
T Consensus         4 ~~iay~~~~~~----~~~~~~l~i~d~dG~~~~~l~~~~~~-----~~sP~wSPDGk~IAf~~~~~~-------------   61 (269)
T d2hqsa1           4 TRIAYVVQTNG----GQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFESG-------------   61 (269)
T ss_dssp             CEEEEEEECSS----SSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTTS-------------
T ss_pred             CeEEEEEEeCC----CCceEEEEEEcCCCCCcEEEecCCCc-----eeeeEECCCCCEEEEEEeecc-------------
Confidence            79999986431    13335899999999999999877653     568899999999999964311             


Q ss_pred             ceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCccc
Q 004475          123 KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSY  200 (751)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~  200 (751)
                                                       ...++.++. .+..++++.. .....+.|||||+.|++......   
T Consensus        62 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~---  105 (269)
T d2hqsa1          62 ---------------------------------RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG---  105 (269)
T ss_dssp             ---------------------------------SCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS---
T ss_pred             ---------------------------------CcceeeeecccCceeEEeeeecccccceecCCCCeeeEeeecCC---
Confidence                                             147888898 4577777766 77778999999999999865432   


Q ss_pred             ccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceee
Q 004475          201 KVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYT  280 (751)
Q Consensus       201 ~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~  280 (751)
                             ...+..+................             .....|+++++. +++....         .....|++
T Consensus       106 -------~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~~---------~g~~~i~~  155 (269)
T d2hqsa1         106 -------SLNLYVMDLASGQIRQVTDGRSN-------------NTEPTWFPDSQN-LAFTSDQ---------AGRPQVYK  155 (269)
T ss_dssp             -------SCEEEEEETTTCCEEECCCCSSC-------------EEEEEECTTSSE-EEEEECT---------TSSCEEEE
T ss_pred             -------ccceeecccccccceeeeecccc-------------cccccccccccc-ceecccc---------cCCceEee
Confidence                   12333444433333332222111             224588999998 6665422         12247888


Q ss_pred             ccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeee
Q 004475          281 QPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR  359 (751)
Q Consensus       281 ~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  359 (751)
                      .+++   +.....++....... +.|||||+.+++.... .+...+++++..++  . .+++...... .      .+.|
T Consensus       156 ~~~~---~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-~~~~~i~~~~~~~~--~-~~~~~~~~~~-~------~p~~  221 (269)
T d2hqsa1         156 VNIN---GGAPQRITWEGSQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATG--G-VQVLSSTFLD-E------TPSL  221 (269)
T ss_dssp             EETT---SSCCEECCCSSSEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTC--C-EEECCCSSSC-E------EEEE
T ss_pred             eecc---cccceeeecccccccccccccccceeEEEeec-CCceeeeEeecccc--c-ceEeecCccc-c------ceEE
Confidence            8886   556666666666667 9999999999998754 34568999998774  2 2333322221 1      1789


Q ss_pred             CCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccc
Q 004475          360 TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR  414 (751)
Q Consensus       360 spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~  414 (751)
                      ||||++|+|.+..                  .....|++++++++..++|+..++
T Consensus       222 SPDG~~i~f~s~~------------------~~~~~l~~~~~dg~~~~~lt~~~g  258 (269)
T d2hqsa1         222 APNGTMVIYSSSQ------------------GMGSVLNLVSTDGRFKARLPATDG  258 (269)
T ss_dssp             CTTSSEEEEEEEE------------------TTEEEEEEEETTSCCEEECCCSSS
T ss_pred             CCCCCEEEEEEcC------------------CCCcEEEEEECCCCCEEEEeCCCC
Confidence            9999999998843                  134479999999988888876543


No 10 
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.88  E-value=2.6e-21  Score=191.45  Aligned_cols=247  Identities=14%  Similarity=0.082  Sum_probs=173.4

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ..+||+.|.++    +..+.|+..+  ..+.+|+|||||++|||++..       .....+|+++..++..++++.....
T Consensus        18 ~~~l~i~d~dG----~~~~~l~~~~--~~~~sP~wSPDGk~IAf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~   84 (269)
T d2hqsa1          18 PYELRVSDYDG----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPRH   84 (269)
T ss_dssp             CEEEEEEETTS----CSCEEEEEES--SCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSSC
T ss_pred             eEEEEEEcCCC----CCcEEEecCC--CceeeeEECCCCCEEEEEEee-------ccCcceeeeecccCceeEEeeeecc
Confidence            45899999999    9999998433  347899999999999998742       4557899999999999999877653


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                           ...+.|||||+.|++.......                                              ..++...
T Consensus        85 -----~~~~~~spdg~~i~~~~~~~~~----------------------------------------------~~~~~~~  113 (269)
T d2hqsa1          85 -----NGAPAFSPDGSKLAFALSKTGS----------------------------------------------LNLYVMD  113 (269)
T ss_dssp             -----EEEEEECTTSSEEEEEECTTSS----------------------------------------------CEEEEEE
T ss_pred             -----cccceecCCCCeeeEeeecCCc----------------------------------------------cceeecc
Confidence                 4577999999999998542111                                              2344343


Q ss_pred             C-CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475          164 L-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR  241 (751)
Q Consensus       164 ~-~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~  241 (751)
                      . .......... .....+.|+++++.+++......          ..++++.+.+++...++......           
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~~~i~~~~~~~~~~~~~~~~~~~-----------  172 (269)
T d2hqsa1         114 LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEGSQ-----------  172 (269)
T ss_dssp             TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSSSE-----------
T ss_pred             cccccceeeeeccccccccccccccccceecccccC----------CceEeeeecccccceeeeccccc-----------
Confidence            3 3344444444 55567889999999988865432          34788999988876665443222           


Q ss_pred             CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc
Q 004475          242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT  320 (751)
Q Consensus       242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~  320 (751)
                        .....|||||+. +++.+..         .....+++++.+   ++. ..++...+... |.|||||++|+|.+.. .
T Consensus       173 --~~~~~~spdg~~-~~~~~~~---------~~~~~i~~~~~~---~~~-~~~~~~~~~~~~p~~SPDG~~i~f~s~~-~  235 (269)
T d2hqsa1         173 --NQDADVSSDGKF-MVMVSSN---------GGQQHIAKQDLA---TGG-VQVLSSTFLDETPSLAPNGTMVIYSSSQ-G  235 (269)
T ss_dssp             --EEEEEECTTSSE-EEEEEEC---------SSCEEEEEEETT---TCC-EEECCCSSSCEEEEECTTSSEEEEEEEE-T
T ss_pred             --ccccccccccce-eEEEeec---------CCceeeeEeecc---ccc-ceEeecCccccceEECCCCCEEEEEEcC-C
Confidence              235699999999 6665422         122367777764   333 34444455556 9999999999998865 3


Q ss_pred             cceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCC
Q 004475          321 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS  361 (751)
Q Consensus       321 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp  361 (751)
                      ...+||+++++++  ..++|+....... .      |+|||
T Consensus       236 ~~~~l~~~~~dg~--~~~~lt~~~g~~~-~------p~WSP  267 (269)
T d2hqsa1         236 MGSVLNLVSTDGR--FKARLPATDGQVK-F------PAWSP  267 (269)
T ss_dssp             TEEEEEEEETTSC--CEEECCCSSSEEE-E------EEECC
T ss_pred             CCcEEEEEECCCC--CEEEEeCCCCcEE-e------EEeCC
Confidence            4578999999984  5667766543211 1      78998


No 11 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.88  E-value=1e-20  Score=203.55  Aligned_cols=359  Identities=11%  Similarity=-0.024  Sum_probs=212.0

Q ss_pred             eeEEeecCCCCCCCCcccccC---CCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475            6 GIGIHRLLPDDSLGPEKEVHG---YPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP   81 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~---~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~   81 (751)
                      +|+++|+.+    |+.+.+..   +.. ...+..++|||||++|||.++..... ......++|++++++++.++++..+
T Consensus        37 ~~~~~~~~t----~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~-r~s~~~~~~l~d~~~~~~~~l~~~~  111 (470)
T d2bgra1          37 NILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW-RHSYTASYDIYDLNKRQLITEERIP  111 (470)
T ss_dssp             CEEEEETTT----CCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC
T ss_pred             cEEEEECCC----CCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCccee-eeccCceEEEEECCCCcccccccCC
Confidence            689999999    98876542   111 22578999999999999987522111 1245689999999999999998776


Q ss_pred             CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475           82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL  161 (751)
Q Consensus        82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  161 (751)
                      .     .+..+.|||||++|+|...                                                  .+||+
T Consensus       112 ~-----~~~~~~~SPDG~~ia~~~~--------------------------------------------------~~l~~  136 (470)
T d2bgra1         112 N-----NTQWVTWSPVGHKLAYVWN--------------------------------------------------NDIYV  136 (470)
T ss_dssp             T-----TEEEEEECSSTTCEEEEET--------------------------------------------------TEEEE
T ss_pred             c-----cccccccccCcceeeEeec--------------------------------------------------ccceE
Confidence            5     3578899999999999833                                                  47888


Q ss_pred             EcC-CCCceecCCC--------------------ceEEeeeeCCCCceEEEEEecCCcccc--c----------------
Q 004475          162 GSL-DGTAKDFGTP--------------------AVYTAVEPSPDQKYVLITSMHRPYSYK--V----------------  202 (751)
Q Consensus       162 ~~~-~G~~~~lt~~--------------------~~~~~~~~SpDG~~i~~~~~~~~~~~~--~----------------  202 (751)
                      +++ +|+..+++..                    .....+.|||||++|+|.+.+......  .                
T Consensus       137 ~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~  216 (470)
T d2bgra1         137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV  216 (470)
T ss_dssp             ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred             EECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeee
Confidence            888 5666666532                    112346799999999998865421000  0                


Q ss_pred             c---cCC--CceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccc
Q 004475          203 P---CAR--FSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI  277 (751)
Q Consensus       203 ~---~~~--~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~  277 (751)
                      .   .+.  -...+++++++++....+.... ....+..+......+..+.|+++++. +++...... +.     ....
T Consensus       217 ~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~-~~~~~~r~~-~~-----~~~~  288 (470)
T d2bgra1         217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQ-NY-----SVMD  288 (470)
T ss_dssp             ECCBTTSCCCEEEEEEEEGGGCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESST-TE-----EEEE
T ss_pred             ccccccccCCcceEEEEECCCcceeeecccc-ccCCccccCCCCceEEEEEEcCCCce-eEEEeeccC-Cc-----eEEE
Confidence            0   000  1134667777655433221100 00001111112223456899999975 333221110 00     0013


Q ss_pred             eeeccCCCCCCCCceEeE------ee------ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc
Q 004475          278 IYTQPAEPAEGEKPEILH------KL------DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV  344 (751)
Q Consensus       278 l~~~~~~~~~~~~~~~l~------~~------~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~  344 (751)
                      ++.++..   .+....+.      ..      ..... +.|++++...++.....++..+||+++.++  ...++++.+.
T Consensus       289 ~~~~d~~---tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g--~~~~~lt~g~  363 (470)
T d2bgra1         289 ICDYDES---SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK--KDCTFITKGT  363 (470)
T ss_dssp             EEEEETT---TTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC--SCCEESCCSS
T ss_pred             EEEecCC---CCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccC--CceeeeccCC
Confidence            4444432   22222211      00      01113 677888766543333345668999999988  4667777654


Q ss_pred             cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce-eEEeeccchhhhhceee
Q 004475          345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVA  423 (751)
Q Consensus       345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~  423 (751)
                      ..- .       ..+++|++.|+|.+...            +  ......+||++++.++.. +.|+..-..    .   
T Consensus       364 ~~v-~-------~~~~~d~~~iyf~a~~~------------~--~~p~~~~ly~v~~~g~~~~~~lt~~~~~----~---  414 (470)
T d2bgra1         364 WEV-I-------GIEALTSDYLYYISNEY------------K--GMPGGRNLYKIQLSDYTKVTCLSCELNP----E---  414 (470)
T ss_dssp             SCE-E-------EEEEECSSEEEEEESCG------------G--GCTTCBEEEEEETTCTTCEEESSTTTST----T---
T ss_pred             eeE-E-------EEEEECCCEEEEEEecC------------C--CCcceEEEEEEECCCCCceeEecccccC----C---
Confidence            331 1       22677888888877321            1  123456899999987544 444321110    0   


Q ss_pred             eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 004475          424 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN  468 (751)
Q Consensus       424 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~  468 (751)
                       ....+.++|||||++++.+.+++..|. +.+++..+|+..++.+
T Consensus       415 -~~~~~s~~fSpdgky~~~~~s~~~~P~-~~l~~~~~g~~v~~le  457 (470)
T d2bgra1         415 -RCQYYSVSFSKEAKYYQLRCSGPGLPL-YTLHSSVNDKGLRVLE  457 (470)
T ss_dssp             -TBCBEEEEECTTSSEEEEEECSBSSCE-EEEEETTTTEEEEEEE
T ss_pred             -CCCEEEEEECCCCCEEEEEecCCCCCe-EEEEECCCCCEEEEEe
Confidence             111234689999999999999988775 6677878887655443


No 12 
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87  E-value=6.5e-20  Score=194.61  Aligned_cols=332  Identities=11%  Similarity=0.113  Sum_probs=201.3

Q ss_pred             CCcceeEEeecCCCCCCCCcccccCCCCcc-cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCC
Q 004475            2 PFFTGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES   80 (751)
Q Consensus         2 ~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~   80 (751)
                      ||...++++|+.+    |..++|+...... .+..|.|||||++|||++.           .+||+++..+++..++|..
T Consensus        88 s~~~~~~i~d~~~----~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~-----------~nl~~~~~~~~~~~~lt~~  152 (465)
T d1xfda1          88 SYTGYYVLSKIPH----GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-----------NNIYYCAHVGKQAIRVVST  152 (465)
T ss_dssp             CCCSEEEEEESSS----CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-----------TEEEEESSSSSCCEEEECC
T ss_pred             eccccEEEEEccC----CceeeccCccCCccccceeeeccCCceEEEEec-----------ceEEEEecCCCceEEEecc
Confidence            6778999999999    9999887433222 4678999999999999863           6899999999999999865


Q ss_pred             CCcc--ccc------------eeeeeEEecCCcEEEEeecCCCCCCCC---CCCCCCCCceeeccccccccchhhhhccC
Q 004475           81 PDIC--LNA------------VFGSFVWVNNSTLLIFTIPSSRRDPPK---KTMVPLGPKIQSNEQKNIIISRMTDNLLK  143 (751)
Q Consensus        81 ~~~~--~~~------------~~~~~~wspDg~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (751)
                      ....  .++            .-..+.|||||++|+|...+.......   .......+......               
T Consensus       153 g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~---------------  217 (465)
T d1xfda1         153 GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH---------------  217 (465)
T ss_dssp             CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE---------------
T ss_pred             cCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee---------------
Confidence            4321  111            113567999999999997653332100   00001111111111               


Q ss_pred             CccchhhhhhheeeEEEEEcCCC-Cceec--CC-----C-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEE
Q 004475          144 DEYDESLFDYYTTAQLVLGSLDG-TAKDF--GT-----P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW  214 (751)
Q Consensus       144 ~~~~~~~~~~~~~~~l~~~~~~G-~~~~l--t~-----~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~  214 (751)
                      ++..+.   ......|+++++++ ..+..  ..     . ..+..+.|+||++.+++..+ +...        ...++++
T Consensus       218 Yp~~G~---~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~n-R~q~--------~~~i~~~  285 (465)
T d1xfda1         218 YPKAGS---ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN-RAQN--------VSILTLC  285 (465)
T ss_dssp             CCBTTS---CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE-TTSC--------EEEEEEE
T ss_pred             ccccCC---CCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEc-cccc--------cceEEEE
Confidence            000000   00225799999944 32221  11     1 23567899999985555443 3211        3568899


Q ss_pred             eCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCC----CCCCCC
Q 004475          215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAE----PAEGEK  290 (751)
Q Consensus       215 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~  290 (751)
                      |+.+++.+.+..... .   .++.   .......|+|||+. ++|+...+       ...++.+|.+.+.    ...+..
T Consensus       286 d~~tg~~~~~~~e~~-~---~wv~---~~~~~p~~~~dg~~-~~fi~~se-------~~g~~~ly~~~~~~~~~~~~~~~  350 (465)
T d1xfda1         286 DATTGVCTKKHEDES-E---AWLH---RQNEEPVFSKDGRK-FFFIRAIP-------QGGRGKFYHITVSSSQPNSSNDN  350 (465)
T ss_dssp             ETTTCCEEEEEEEEC-S---SCCC---CCCCCCEECTTSCS-EEEEEEEC-------CSSSSCEEEEEEECSSCCSSSCC
T ss_pred             cCCCCcEEEEEEEcC-C---ceEe---ccCCceeEccCCCe-eEEEEeee-------ecccCceEEEEeccccccCCCce
Confidence            999887776643211 1   1111   11125699999999 55543221       1234566666431    122455


Q ss_pred             ceEeEeeceeEE--EEEecCCceEEEeeeec-ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEE
Q 004475          291 PEILHKLDLRFS--VSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI  367 (751)
Q Consensus       291 ~~~l~~~~~~~~--~~~spdg~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~  367 (751)
                      .+.|+.++..+.  ++|+++++.|+|.++.. +...+||.++++++ ...+.|+......    ++...+.|||||++++
T Consensus       351 ~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~-~~~~~lt~~~~~~----~~~~~~~~S~~~~y~v  425 (465)
T d1xfda1         351 IQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCDLVEN----CTYFSASFSHSMDFFL  425 (465)
T ss_dssp             CCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTTSSSS----CCCCEEEECTTSSEEE
T ss_pred             eEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCC-CcceeeccccCCC----CCEEEEEECCCCCEEE
Confidence            678888888876  78999999999988643 46679999999885 3334443221111    1222378999999988


Q ss_pred             EeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475          368 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN  413 (751)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~  413 (751)
                      .....                  ...+...+++..+++...++..+
T Consensus       426 ~~~s~------------------~~~P~~~~~~~~~~~~~~~Le~N  453 (465)
T d1xfda1         426 LKCEG------------------PGVPMVTVHNTTDKKKMFDLETN  453 (465)
T ss_dssp             EECCS------------------SSSCCEEEEETTTCCEEEEEECC
T ss_pred             EEeec------------------CCCCeEEEEECCCCCEEEEEcCC
Confidence            77632                  12345666677777765555443


No 13 
>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}
Probab=99.87  E-value=1.1e-20  Score=176.46  Aligned_cols=210  Identities=14%  Similarity=0.148  Sum_probs=152.8

Q ss_pred             ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEE
Q 004475          480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA  559 (751)
Q Consensus       480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~  559 (751)
                      +.+.++++..+| ++.+.+..|+...   ..+.+++|++|+.|...        ++  .........+..|+++||.|+.
T Consensus         7 ~~~~l~i~gp~G-~l~~~~~~p~~~~---~~~~~~~vl~Hph~~~G--------G~--~~~~~~~~la~~l~~~G~~vlr   72 (218)
T d2fuka1           7 ESAALTLDGPVG-PLDVAVDLPEPDV---AVQPVTAIVCHPLSTEG--------GS--MHNKVVTMAARALRELGITVVR   72 (218)
T ss_dssp             SCEEEEEEETTE-EEEEEEECCCTTS---CCCSEEEEEECSCTTTT--------CS--TTCHHHHHHHHHHHTTTCEEEE
T ss_pred             CceEEEEeCCCc-cEEEEEEcCCCCC---CCCCcEEEEECCCCCCC--------cC--CCChHHHHHHHHHHHcCCeEEE
Confidence            457788887666 7999999996532   22357889999653210        10  0011112456788999999999


Q ss_pred             cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCC
Q 004475          560 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT  639 (751)
Q Consensus       560 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~  639 (751)
                         ++++|+|.+...........+|+..+++|+.++.  +..+++++|+||||.+|+.++.+.  .++++|+++|..+..
T Consensus        73 ---fd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~  145 (218)
T d2fuka1          73 ---FNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW  145 (218)
T ss_dssp             ---ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB
T ss_pred             ---eecCCCccCCCccCcCcchHHHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch
Confidence               5566777776554444567899999999999874  357899999999999999888875  367889988864321


Q ss_pred             CCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475          640 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY  719 (751)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~  719 (751)
                      ..                         ...++.+|+|++||++|.++|  ++++.++++++   ..+.+++++|+++|.|
T Consensus       146 ~~-------------------------~~~~~~~P~Lvi~G~~D~~vp--~~~~~~l~~~~---~~~~~l~~i~ga~H~f  195 (218)
T d2fuka1         146 DF-------------------------SDVQPPAQWLVIQGDADEIVD--PQAVYDWLETL---EQQPTLVRMPDTSHFF  195 (218)
T ss_dssp             CC-------------------------TTCCCCSSEEEEEETTCSSSC--HHHHHHHHTTC---SSCCEEEEETTCCTTC
T ss_pred             hh-------------------------hccccccceeeEecCCCcCcC--HHHHHHHHHHc---cCCceEEEeCCCCCCC
Confidence            10                         012356899999999999999  88887776544   3457899999999988


Q ss_pred             CccccHHHHHHHHHHHHHHHhcC
Q 004475          720 AARENVMHVIWETDRWLQKYCLS  742 (751)
Q Consensus       720 ~~~~~~~~~~~~~~~fl~~~l~~  742 (751)
                      .  ....+..+.+.+|+.++|..
T Consensus       196 ~--~~~~~l~~~~~~~v~~~l~~  216 (218)
T d2fuka1         196 H--RKLIDLRGALQHGVRRWLPA  216 (218)
T ss_dssp             T--TCHHHHHHHHHHHHGGGCSS
T ss_pred             C--CCHHHHHHHHHHHHHHhcCC
Confidence            5  34456888899999999864


No 14 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.86  E-value=1.2e-20  Score=194.80  Aligned_cols=318  Identities=11%  Similarity=0.051  Sum_probs=198.0

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC   84 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~   84 (751)
                      .+||++++.+    |+.+++.   ....+..++|||||++|++++.        +....|+++++++++.++++....  
T Consensus        24 g~v~v~d~~~----~~~~~~~---~~~~v~~~~~spDg~~l~~~~~--------~~g~~v~v~d~~~~~~~~~~~~~~--   86 (360)
T d1k32a3          24 GQAFIQDVSG----TYVLKVP---EPLRIRYVRRGGDTKVAFIHGT--------REGDFLGIYDYRTGKAEKFEENLG--   86 (360)
T ss_dssp             TEEEEECTTS----SBEEECS---CCSCEEEEEECSSSEEEEEEEE--------TTEEEEEEEETTTCCEEECCCCCC--
T ss_pred             CeEEEEECCC----CcEEEcc---CCCCEEEEEECCCCCEEEEEEc--------CCCCEEEEEECCCCcEEEeeCCCc--
Confidence            4799999988    9988875   4446899999999999999874        334679999999999999876654  


Q ss_pred             ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475           85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL  164 (751)
Q Consensus        85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  164 (751)
                         .+..++|||||++|++....                                                 ..++.+++
T Consensus        87 ---~v~~~~~spdg~~l~~~~~~-------------------------------------------------~~~~~~~~  114 (360)
T d1k32a3          87 ---NVFAMGVDRNGKFAVVANDR-------------------------------------------------FEIMTVDL  114 (360)
T ss_dssp             ---SEEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred             ---eEEeeeecccccccceeccc-------------------------------------------------cccccccc
Confidence               36788999999999988442                                                 47888888


Q ss_pred             -CCCceecC-CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCcc
Q 004475          165 -DGTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR  241 (751)
Q Consensus       165 -~G~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~  241 (751)
                       +++..++. .+ ..+..++|||||++|++.........   .......+++|+..+++...++.....           
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~---~~~~~~~~~v~d~~~~~~~~~~~~~~~-----------  180 (360)
T d1k32a3         115 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGET---DGYVMQAIHVYDMEGRKIFAATTENSH-----------  180 (360)
T ss_dssp             TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT---CSCCEEEEEEEETTTTEEEECSCSSSB-----------
T ss_pred             cccceeeeeecccccccchhhccceeeeeeeccccccce---eeccccceeeeccccCceeeecccccc-----------
Confidence             55544443 33 56778999999999999776543211   122346788999998877766443322           


Q ss_pred             CCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCC-----CCCCCceEeEeeceeEE-EEEecCCceEEEe
Q 004475          242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEP-----AEGEKPEILHKLDLRFS-VSWCDDSLALVNE  315 (751)
Q Consensus       242 ~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~  315 (751)
                        ...+.|+|||++ |++.+..            ..+..++...     .....+..+........ +.|+++++.++..
T Consensus       181 --~~~~~~spdg~~-l~~~s~~------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  245 (360)
T d1k32a3         181 --DYAPAFDADSKN-LYYLSYR------------SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAG  245 (360)
T ss_dssp             --EEEEEECTTSCE-EEEEESC------------CCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCC
T ss_pred             --cccccccCCCCE-EEEEeCC------------CceEcccccccceeeccccceEEEecccCccccceECCCcCccccc
Confidence              346799999999 7765421            1122222110     00111112222222333 5688888876543


Q ss_pred             eee-cccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCc
Q 004475          316 TWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP  394 (751)
Q Consensus       316 ~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (751)
                      ... ......++.++..++  ....+.........       +.+.+++....+..                  ......
T Consensus       246 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------------------~~~~~~  298 (360)
T d1k32a3         246 EYDLNDMYKRSSPINVDPG--DYRMIIPLESSILI-------YSVPVHGEFAAYYQ------------------GAPEKG  298 (360)
T ss_dssp             CCCCTTGGGGCEECSCCCB--CEEEEEECSSEEEE-------EECCCCCSHHHHHH------------------CCCCCE
T ss_pred             ceeecccccceeecccCcC--ceeEeeecCCCceE-------EEEEecCCCeeEEE------------------ecCCCC
Confidence            321 122345777766653  23333322111100       22333332111111                  012345


Q ss_pred             eeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475          395 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI  466 (751)
Q Consensus       395 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l  466 (751)
                      .|++||+++++.+.+...        +.       .++|||||++|++....    +.|+++|++.++.++.
T Consensus       299 ~i~~~d~~~~~~~~~~~~--------v~-------~~~~SpDG~~l~~~~~D----g~i~v~d~~~~~~~~~  351 (360)
T d1k32a3         299 VLLKYDVKTRKVTEVKNN--------LT-------DLRLSADRKTVMVRKDD----GKIYTFPLEKPEDERT  351 (360)
T ss_dssp             EEEEEETTTCCEEEEEEE--------EE-------EEEECTTSCEEEEEETT----SCEEEEESSCTTSCEE
T ss_pred             EEEEEECCCCeEEEecCC--------cC-------EEEECCCCCEEEEEECC----CeEEEEECCCCCcceE
Confidence            789999998876554321        22       25899999999876532    5699999998876553


No 15 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.86  E-value=2e-20  Score=186.25  Aligned_cols=255  Identities=13%  Similarity=0.055  Sum_probs=163.3

Q ss_pred             eeecCC--CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475           36 VSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP  113 (751)
Q Consensus        36 p~~SPD--G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~  113 (751)
                      ..+|||  |++|||++.           .+||++++++|+.++||..+.     ....++|||||++|+|........  
T Consensus         4 ~~~sPdi~G~~v~f~~~-----------~dl~~~d~~~g~~~~Lt~~~~-----~~~~p~~SPDG~~iaf~~~~~~~~--   65 (281)
T d1k32a2           4 LLLNPDIHGDRIIFVCC-----------DDLWEHDLKSGSTRKIVSNLG-----VINNARFFPDGRKIAIRVMRGSSL--   65 (281)
T ss_dssp             CCEEEEEETTEEEEEET-----------TEEEEEETTTCCEEEEECSSS-----EEEEEEECTTSSEEEEEEEESTTC--
T ss_pred             cccCCCCCCCEEEEEeC-----------CcEEEEECCCCCEEEEecCCC-----cccCEEECCCCCEEEEEEeeCCCC--
Confidence            357999  999999752           579999999999999998876     356789999999999985432111  


Q ss_pred             CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-c-------eEEeeeeCC
Q 004475          114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-A-------VYTAVEPSP  184 (751)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~-------~~~~~~~Sp  184 (751)
                                                               ...+||++++ +|+.++|+.. .       ....+.|||
T Consensus        66 -----------------------------------------~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~sp  104 (281)
T d1k32a2          66 -----------------------------------------NTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDP  104 (281)
T ss_dssp             -----------------------------------------CEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECT
T ss_pred             -----------------------------------------CceEEEEEEecCCceEEeeecCCCccCccccccccccCC
Confidence                                                     2258999999 6688888765 1       234678999


Q ss_pred             CCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEecc
Q 004475          185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD  264 (751)
Q Consensus       185 DG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~  264 (751)
                      ||+.|+|+......       .....++.++.+++..+......                ....|.++|.. +++.....
T Consensus       105 dg~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~-~~~~~~~~  160 (281)
T d1k32a2         105 DGNLIISTDAMQPF-------SSMTCLYRVENDGINFVPLNLGP----------------ATHILFADGRR-VIGRNTFE  160 (281)
T ss_dssp             TCCEEEEECTTSSS-------TTCCEEEEEEGGGTEEEECCSCS----------------CSEEEEETTEE-EEEESCSC
T ss_pred             CCCEEEEEEccCCC-------ccceeeeeecCCCceeEEecCCc----------------cceeeecCCCe-EEEeeccc
Confidence            99999997654321       11245677888777665442221                13478888887 44433222


Q ss_pred             CCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec
Q 004475          265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR  343 (751)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~  343 (751)
                      ....................   ......++....... +.++++  .+++.... ....+||+++++++  ..++|+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~l~~~d~~g~--~~~~lt~~  232 (281)
T d1k32a2         161 LPHWKGYRGGTRGKIWIEVN---SGAFKKIVDMSTHVSSPVIVGH--RIYFITDI-DGFGQIYSTDLDGK--DLRKHTSF  232 (281)
T ss_dssp             CTTSTTCCSTTCCEEEEEEE---TTEEEEEECCSSCCEEEEEETT--EEEEEECT-TSSCEEEEEETTSC--SCEECCCC
T ss_pred             cceeeeeccCCcceeeeecc---ccceeeccCCccccceeeeecc--ccceeccc-ccccceEEEeCCCC--ceEEeecC
Confidence            11111000011111111111   122233333344444 777765  45554433 34578999999984  66777754


Q ss_pred             ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475          344 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE  411 (751)
Q Consensus       344 ~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~  411 (751)
                      ....        ...|||||+.|+|...                      ..||++|+++|+.++|.-
T Consensus       233 ~~~~--------~~~~SpDG~~I~f~~~----------------------~~l~~~d~~~g~~~~i~~  270 (281)
T d1k32a2         233 TDYY--------PRHLNTDGRRILFSKG----------------------GSIYIFNPDTEKIEKIEI  270 (281)
T ss_dssp             CSSC--------EEEEEESSSCEEEEET----------------------TEEEEECTTTCCEEECCC
T ss_pred             CCcc--------cccCcCCCCEEEEEeC----------------------CEEEEEECCCCCEEEecc
Confidence            3221        1569999999999761                      269999999999988854


No 16 
>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]}
Probab=99.84  E-value=2.4e-20  Score=182.05  Aligned_cols=206  Identities=14%  Similarity=0.098  Sum_probs=147.8

Q ss_pred             ceEEEEEEcCCC-ceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          480 QKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       480 ~~e~i~~~~~~~-~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      ....+++....+ ....+.+|+|.+..   ++++|+||++||.+           +....    ...++..|+++||+|+
T Consensus        22 ~~~~~~~~~~~~~g~~~~~ly~P~~~~---~g~~P~Vv~~HG~~-----------g~~~~----~~~~a~~lA~~Gy~V~   83 (260)
T d1jfra_          22 ATSQTSVSSLVASGFGGGTIYYPTSTA---DGTFGAVVISPGFT-----------AYQSS----IAWLGPRLASQGFVVF   83 (260)
T ss_dssp             CEEEEEECTTTCSSSCCEEEEEESCCT---TCCEEEEEEECCTT-----------CCGGG----TTTHHHHHHTTTCEEE
T ss_pred             ceeEEEeccCCcCcccCEEEEEcCCCC---CCCccEEEEECCCC-----------CCHHH----HHHHHHHHHhCCCEEE
Confidence            344455543222 23457899997632   34699999999964           11121    2356789999999999


Q ss_pred             EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccC
Q 004475          559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG  634 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~----~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~  634 (751)
                      +++.   .+.+..      ......|+..+++++.+.    ..+|.+||+++|||+||.+++.++...+ +++++|+++|
T Consensus        84 ~~d~---~~~~~~------~~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~  153 (260)
T d1jfra_          84 TIDT---NTTLDQ------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTG  153 (260)
T ss_dssp             EECC---SSTTCC------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESC
T ss_pred             EEee---CCCcCC------chhhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeec
Confidence            9554   343221      234467788888998874    4589999999999999999999999884 6888898888


Q ss_pred             CCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 004475          635 SYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF  714 (751)
Q Consensus       635 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~  714 (751)
                      ....                           ....++++|+|++||+.|.++|  +....+.+..+...+.+++++++++
T Consensus       154 ~~~~---------------------------~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~~~~~~~~i~g  204 (260)
T d1jfra_         154 WNTD---------------------------KTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLPGSLDKAYLELRG  204 (260)
T ss_dssp             CCSC---------------------------CCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred             cccc---------------------------ccccccccceeEEecCCCCCCC--HHHHHHHHHHhcccCCCEEEEEECC
Confidence            5321                           1234578999999999999998  6654444434444567889999999


Q ss_pred             CCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475          715 EHHVYAARENVMHVIWETDRWLQKYCLSN  743 (751)
Q Consensus       715 ~~H~~~~~~~~~~~~~~~~~fl~~~l~~~  743 (751)
                      ++|.+.... .....+.++.||+.+|+.+
T Consensus       205 a~H~~~~~~-~~~~~~~~~~wl~~~L~~d  232 (260)
T d1jfra_         205 ASHFTPNTS-DTTIAKYSISWLKRFIDSD  232 (260)
T ss_dssp             CCTTGGGSC-CHHHHHHHHHHHHHHHSCC
T ss_pred             CccCCCCCC-hHHHHHHHHHHHHHHhcCc
Confidence            999876443 3467778899999998864


No 17 
>d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]}
Probab=99.84  E-value=3e-20  Score=178.46  Aligned_cols=207  Identities=16%  Similarity=0.137  Sum_probs=147.3

Q ss_pred             eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475          481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG  560 (751)
Q Consensus       481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~  560 (751)
                      .|.|.|++.+|..+.+++..|.+      +++|+||++|++. +              ........+..|+++||.|+++
T Consensus         3 ~e~v~~~~~dg~~~~a~~~~P~~------~~~P~vl~~h~~~-G--------------~~~~~~~~a~~lA~~Gy~vl~p   61 (233)
T d1dina_           3 TEGISIQSYDGHTFGALVGSPAK------APAPVIVIAQEIF-G--------------VNAFMRETVSWLVDQGYAAVCP   61 (233)
T ss_dssp             CTTCCEECTTSCEECEEEECCSS------SSEEEEEEECCTT-B--------------SCHHHHHHHHHHHHTTCEEEEE
T ss_pred             ceEEEEEcCCCCEEEEEEECCCC------CCceEEEEeCCCC-C--------------CCHHHHHHHHHHHhcCCcceee
Confidence            45678899999999999999964      3699999999742 0              1111124567889999999997


Q ss_pred             CCCCCCCCCCCCCCch--------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCce
Q 004475          561 PSIPIIGEGDKLPNDR--------------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF  626 (751)
Q Consensus       561 ~~~~~~g~g~~~~~~~--------------~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~  626 (751)
                      |.++..+.+.......              .......|+..+++++.+.+. +..||+++|+|+||.+++.++...  .+
T Consensus        62 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~~--~~  138 (233)
T d1dina_          62 DLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAKG--YV  138 (233)
T ss_dssp             CGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHHT--CS
T ss_pred             eeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCC-CCCceEEEEecccccceeeccccc--cc
Confidence            7654333322211111              123346788999999988764 557999999999999999988775  35


Q ss_pred             eEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCc
Q 004475          627 CCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL  706 (751)
Q Consensus       627 ~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~  706 (751)
                      .+++++.+...                        .++...+.++++|+|++||++|+.+|  .+..+.+.+.++ .+++
T Consensus       139 ~~~~~~~~~~~------------------------~~~~~~~~~i~~Pvl~~~G~~D~~vp--~e~~~~~~~~~~-~~~~  191 (233)
T d1dina_         139 DRAVGYYGVGL------------------------EKQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFG-ANPL  191 (233)
T ss_dssp             SEEEEESCSCG------------------------GGGGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHT-TCTT
T ss_pred             ceecccccccc------------------------ccchhhhhccCCcceeeecccccCCC--HHHHHHHHHHHh-cCCC
Confidence            56666554210                        01123355688999999999999998  888887777664 5788


Q ss_pred             EEEEEeCCCCCcCCccc-------cHHHHHHHHHHHHHH
Q 004475          707 SRLVLLPFEHHVYAARE-------NVMHVIWETDRWLQK  738 (751)
Q Consensus       707 ~~~~~~~~~~H~~~~~~-------~~~~~~~~~~~fl~~  738 (751)
                      +++++||+++|+|....       .....++++++||..
T Consensus       192 ~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~  230 (233)
T d1dina_         192 LQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP  230 (233)
T ss_dssp             EEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred             EEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence            99999999999985322       123457788899864


No 18 
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}
Probab=99.84  E-value=6e-20  Score=183.57  Aligned_cols=227  Identities=11%  Similarity=0.039  Sum_probs=149.3

Q ss_pred             eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475          481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG  560 (751)
Q Consensus       481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~  560 (751)
                      +....++..+|..+++|.+.|.+..+.   +.|+||++||.+..               ......++..|+++||+|++ 
T Consensus         4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~---~~~~Vvi~HG~~~~---------------~~~~~~~a~~L~~~G~~Vi~-   64 (302)
T d1thta_           4 TIAHVLRVNNGQELHVWETPPKENVPF---KNNTILIASGFARR---------------MDHFAGLAEYLSTNGFHVFR-   64 (302)
T ss_dssp             CEEEEEEETTTEEEEEEEECCCTTSCC---CSCEEEEECTTCGG---------------GGGGHHHHHHHHTTTCCEEE-
T ss_pred             eeeeEEEcCCCCEEEEEEecCcCCCCC---CCCEEEEeCCCcch---------------HHHHHHHHHHHHHCCCEEEE-
Confidence            345566778999999999999764332   47899999996411               11233567899999999999 


Q ss_pred             CCCCCCCC-CCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCC
Q 004475          561 PSIPIIGE-GDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN  637 (751)
Q Consensus       561 ~~~~~~g~-g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d  637 (751)
                        ++++|+ |.+..  .........+|+..+++++.++.   .++|+|+||||||.+|+.+|..  ..++++|+.+|+.+
T Consensus        65 --~D~rGh~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~  137 (302)
T d1thta_          65 --YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVN  137 (302)
T ss_dssp             --ECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSC
T ss_pred             --ecCCCCCCCCCCcccCCCHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhcc--cccceeEeeccccc
Confidence              455554 44432  22335567899999999998764   4689999999999999887764  35889999998765


Q ss_pred             CCCC----------ccC---ccccc----ccchh---hHHHHHhc-----CcccccCCCCCCEEEEEcCCCCCCCCChHH
Q 004475          638 KTLT----------PFG---FQTEF----RTLWE---ATNVYIEM-----SPITHANKIKKPILIIHGEVDDKVGLFPMQ  692 (751)
Q Consensus       638 ~~~~----------~~~---~~~~~----~~~~~---~~~~~~~~-----~~~~~~~~~~~P~li~~G~~D~~vp~~~~~  692 (751)
                      ....          ...   .....    .....   ..+.+...     ++...++++++|+|++||++|.+||  ++.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~--~~~  215 (302)
T d1thta_         138 LRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEE  215 (302)
T ss_dssp             HHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHH
T ss_pred             HHHHHHHHHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccC--HHH
Confidence            2100          000   00000    00000   00001100     1344678899999999999999999  999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc-HHHHHHHHHHHHH
Q 004475          693 AERFFDALKGHGALSRLVLLPFEHHVYAAREN-VMHVIWETDRWLQ  737 (751)
Q Consensus       693 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~fl~  737 (751)
                      ++++++.++.  .++++++++|++|.+..... ...+++.+..+..
T Consensus       216 ~~~l~~~i~s--~~~kl~~~~g~~H~l~e~~~~~~~~~~~~~~~~~  259 (302)
T d1thta_         216 VYDMLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAI  259 (302)
T ss_dssp             HHHHHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCC--CCceEEEecCCCcccccChHHHHHHHHHHHHHHh
Confidence            9988887753  36899999999998753222 2334455555543


No 19 
>d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]}
Probab=99.83  E-value=3.8e-20  Score=189.76  Aligned_cols=244  Identities=13%  Similarity=0.007  Sum_probs=163.0

Q ss_pred             CccCCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC
Q 004475          475 TLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR  554 (751)
Q Consensus       475 ~~~~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  554 (751)
                      ....+..+..++++.+|..|.+.+|.|++.    ++++|+|||+|||||..++.        ...  .....+..++++|
T Consensus        73 ~~~~v~~~~~~i~~~dg~~i~~~iy~P~~~----~~~~Pviv~~HGGG~~~gs~--------~~~--~~~~~~~~la~~g  138 (358)
T d1jkma_          73 DRDDVETSTETILGVDGNEITLHVFRPAGV----EGVLPGLVYTHGGGMTILTT--------DNR--VHRRWCTDLAAAG  138 (358)
T ss_dssp             CCCCEEEEEEEEECTTSCEEEEEEEEETTC----CSCEEEEEEECCSTTTSSCS--------SSH--HHHHHHHHHHHTT
T ss_pred             CCCCccEEEEEEeCCCCCEEEEEEEecCCC----CCCCCeEEEecCCeeeeccc--------ccc--ccchHHHHHHhhh
Confidence            345577888899999999999999999863    34689999999998754321        110  0123566788999


Q ss_pred             eEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeE
Q 004475          555 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCC  628 (751)
Q Consensus       555 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~-~~id~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~  628 (751)
                      ++|+.++|+...+..    +...+...++|+.++++|+.++ ..+|++||+|+|.|.||++|+.++...     ...+.+
T Consensus       139 ~~VvsvdYRla~~~~----pe~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~  214 (358)
T d1jkma_         139 SVVVMVDFRNAWTAE----GHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDG  214 (358)
T ss_dssp             CEEEEEECCCSEETT----EECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSE
T ss_pred             heeeeeeeccccccc----ccCCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccc
Confidence            999997775432211    1122345689999999999875 346788999999999999998877542     245788


Q ss_pred             EEEccCCCCCCCCccCcccc--------cccch---hhHHHH-Hh--------cCccccc-------CCCCCCEEEEEcC
Q 004475          629 GIARSGSYNKTLTPFGFQTE--------FRTLW---EATNVY-IE--------MSPITHA-------NKIKKPILIIHGE  681 (751)
Q Consensus       629 ~v~~~~~~d~~~~~~~~~~~--------~~~~~---~~~~~~-~~--------~~~~~~~-------~~~~~P~li~~G~  681 (751)
                      .++..|..+...........        ....+   .....+ ..        .++....       -+--+|+||++|+
T Consensus       215 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~  294 (358)
T d1jkma_         215 VYASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNE  294 (358)
T ss_dssp             EEEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEET
T ss_pred             cccccceeccccCccchhhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECC
Confidence            88888876643221110000        00000   000001 00        0111100       0112699999999


Q ss_pred             CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc------cccHHHHHHHHHHHHHHHh
Q 004475          682 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA------RENVMHVIWETDRWLQKYC  740 (751)
Q Consensus       682 ~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~------~~~~~~~~~~~~~fl~~~l  740 (751)
                      .|.+    ..++..++++|+++|+++++++|++..|+|..      .+..++.++.+..|+..+.
T Consensus       295 ~D~l----~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~  355 (358)
T d1jkma_         295 LDPL----RDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA  355 (358)
T ss_dssp             TCTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----HHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence            9976    57889999999999999999999999998632      1234556788888987764


No 20 
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]}
Probab=99.83  E-value=1.7e-19  Score=182.41  Aligned_cols=238  Identities=18%  Similarity=0.147  Sum_probs=154.1

Q ss_pred             ccCCceEEEEEEcCCCc-eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-C
Q 004475          476 LASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-R  553 (751)
Q Consensus       476 ~~~~~~e~i~~~~~~~~-~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  553 (751)
                      ...+..++++++..+|. .+.+++|.|++.    .+++|+||++|||||..++.        ..    .......++. .
T Consensus        45 ~~~v~~~~~~~~~~~g~~~i~~~~~~P~~~----~~~~Pvvv~iHGGG~~~g~~--------~~----~~~~~~~la~~~  108 (317)
T d1lzla_          45 FDGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGTA--------ES----SDPFCVEVAREL  108 (317)
T ss_dssp             CTTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCCG--------GG----GHHHHHHHHHHH
T ss_pred             CCCceEEEEEEecCCCCceEEEEEECCCCC----CCCCcEEEEecCcccccccc--------cc----cchHHHhHHhhc
Confidence            34567789999988875 699999999762    34689999999998754332        11    1234455554 6


Q ss_pred             CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----ce
Q 004475          554 RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LF  626 (751)
Q Consensus       554 G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~  626 (751)
                      ||+|+.++|+....        ......++|+..+++|+.++   ..+|++||+|+|+|+||++++.++.+.++    ..
T Consensus       109 G~~V~~vdYrl~pe--------~~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~  180 (317)
T d1lzla_         109 GFAVANVEYRLAPE--------TTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPV  180 (317)
T ss_dssp             CCEEEEECCCCTTT--------SCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCC
T ss_pred             CCcccccccccccc--------ccccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccc
Confidence            99999977753221        12245678888888888764   34889999999999999999998875422    12


Q ss_pred             eEEEEccCCCCCCCCccCccc-ccccchhhH------HHHH--------------hcCccccc-CCCCCCEEEEEcCCCC
Q 004475          627 CCGIARSGSYNKTLTPFGFQT-EFRTLWEAT------NVYI--------------EMSPITHA-NKIKKPILIIHGEVDD  684 (751)
Q Consensus       627 ~~~v~~~~~~d~~~~~~~~~~-~~~~~~~~~------~~~~--------------~~~~~~~~-~~~~~P~li~~G~~D~  684 (751)
                      ...++..+..+.......... .....+...      ..+.              ..++.... ....+|+|+++|+.|.
T Consensus       181 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~  260 (317)
T d1lzla_         181 AFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDP  260 (317)
T ss_dssp             CEEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCT
T ss_pred             cccccccccccccccccccccccccchhhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCC
Confidence            333333333221111000000 000000000      0000              00111111 1224799999999996


Q ss_pred             CCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc---HHHHHHHHHHHHHHHhc
Q 004475          685 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN---VMHVIWETDRWLQKYCL  741 (751)
Q Consensus       685 ~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~fl~~~l~  741 (751)
                      +    ..+++.++++|+++|+++++++||+++|+|.....   ..+...++++||.++|+
T Consensus       261 l----~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr  316 (317)
T d1lzla_         261 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR  316 (317)
T ss_dssp             T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred             C----HHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence            4    67899999999999999999999999998854332   34567788999999886


No 21 
>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]}
Probab=99.82  E-value=3.3e-19  Score=173.02  Aligned_cols=190  Identities=16%  Similarity=0.151  Sum_probs=142.1

Q ss_pred             CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCC
Q 004475          491 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD  570 (751)
Q Consensus       491 ~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~  570 (751)
                      +......+|+|++      .+.|+||++|||+|..++..        .+    ...+..|+++||+|+.++|+...    
T Consensus        47 ~~~~~lDiy~P~~------~~~P~vv~iHGG~w~~g~~~--------~~----~~~a~~l~~~G~~Vv~~~YRl~p----  104 (261)
T d2pbla1          47 GDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDKS--------SW----SHLAVGALSKGWAVAMPSYELCP----  104 (261)
T ss_dssp             STTCEEEEECCSS------SCSEEEEEECCSTTTSCCGG--------GC----GGGGHHHHHTTEEEEEECCCCTT----
T ss_pred             CcCeEEEEeccCC------CCCCeEEEECCCCCccCChh--------Hh----hhHHHHHhcCCceeecccccccc----
Confidence            3344667888865      24799999999988654321        11    23467789999999997775221    


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC------CceeEEEEccCCCCCCCCccC
Q 004475          571 KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNKTLTPFG  644 (751)
Q Consensus       571 ~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p------~~~~~~v~~~~~~d~~~~~~~  644 (751)
                          .......++|+.++++|+.++.   ++||+|+|||+||++|++++....      ..++++++++|+++.......
T Consensus       105 ----~~~~p~~~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (261)
T d2pbla1         105 ----EVRISEITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT  177 (261)
T ss_dssp             ----TSCHHHHHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS
T ss_pred             ----cccCchhHHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh
Confidence                1234677899999999999874   479999999999999988876542      248899999998875432211


Q ss_pred             cccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCc
Q 004475          645 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV  718 (751)
Q Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~  718 (751)
                        ..........+.+...||+.++.+..+|+|++||++|..++  ..++++++++++     ++.+++++.+|.
T Consensus       178 --~~~~~~~~~~~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~--~~qs~~~~~~l~-----~~~~~~~~~~HF  242 (261)
T d2pbla1         178 --SMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEKHHF  242 (261)
T ss_dssp             --TTHHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTCCTT
T ss_pred             --hhcccccCCHHHHHHhCchhhcccCCCeEEEEEecCCCchH--HHHHHHHHHHhC-----CCceEeCCCCch
Confidence              11112223466778889999999999999999999999888  899999999884     467889999993


No 22 
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.81  E-value=3.4e-19  Score=183.85  Aligned_cols=190  Identities=13%  Similarity=0.062  Sum_probs=139.7

Q ss_pred             ccceeecC-CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        33 ~~~p~~SP-DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      ...+.||| ||++|||++           ..+||++++++++.+++++..      .+..++|||||++|++.+...   
T Consensus         5 ~~~~~fSP~dG~~~a~~~-----------~g~v~v~d~~~~~~~~~~~~~------~v~~~~~spDg~~l~~~~~~~---   64 (360)
T d1k32a3           5 KFAEDFSPLDGDLIAFVS-----------RGQAFIQDVSGTYVLKVPEPL------RIRYVRRGGDTKVAFIHGTRE---   64 (360)
T ss_dssp             GGEEEEEECGGGCEEEEE-----------TTEEEEECTTSSBEEECSCCS------CEEEEEECSSSEEEEEEEETT---
T ss_pred             hhcccccCCCCCEEEEEE-----------CCeEEEEECCCCcEEEccCCC------CEEEEEECCCCCEEEEEEcCC---
Confidence            34578999 999999964           268999999999999986433      378899999999999985421   


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCceE
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYV  189 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~i  189 (751)
                                                                  ...|+++++ +|+.+++..+ ..+..++|||||++|
T Consensus        65 --------------------------------------------g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l  100 (360)
T d1k32a3          65 --------------------------------------------GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFA  100 (360)
T ss_dssp             --------------------------------------------EEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEE
T ss_pred             --------------------------------------------CCEEEEEECCCCcEEEeeCCCceEEeeeeccccccc
Confidence                                                        136889999 6688888877 778899999999999


Q ss_pred             EEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCc
Q 004475          190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN  269 (751)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~  269 (751)
                      ++....             ..+++|+.++++...+....            ......++|||||++ |++......... 
T Consensus       101 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~spdg~~-la~~~~~~~~~~-  153 (360)
T d1k32a3         101 VVANDR-------------FEIMTVDLETGKPTVIERSR------------EAMITDFTISDNSRF-IAYGFPLKHGET-  153 (360)
T ss_dssp             EEEETT-------------SEEEEEETTTCCEEEEEECS------------SSCCCCEEECTTSCE-EEEEEEECSSTT-
T ss_pred             ceeccc-------------cccccccccccceeeeeecc------------cccccchhhccceee-eeeeccccccce-
Confidence            987544             36889999887765543321            122457899999999 776554332211 


Q ss_pred             cccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeee
Q 004475          270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETW  317 (751)
Q Consensus       270 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~  317 (751)
                       .......++++++.   ++....++....... +.|||||+.|++.+.
T Consensus       154 -~~~~~~~~~v~d~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~  198 (360)
T d1k32a3         154 -DGYVMQAIHVYDME---GRKIFAATTENSHDYAPAFDADSKNLYYLSY  198 (360)
T ss_dssp             -CSCCEEEEEEEETT---TTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             -eeccccceeeeccc---cCceeeecccccccccccccCCCCEEEEEeC
Confidence             22233578888875   445555566666666 899999999998774


No 23 
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]}
Probab=99.81  E-value=4e-19  Score=171.90  Aligned_cols=221  Identities=19%  Similarity=0.142  Sum_probs=142.8

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      +.+|++++.   |  +......|.+       +.|+||++||.+.           ....+    ..++..|+++||+|+
T Consensus         3 ~~~~~~~l~---g--~~~~~~~p~~-------~~~~vl~lHG~~~-----------~~~~~----~~~~~~la~~G~~V~   55 (238)
T d1ufoa_           3 VRTERLTLA---G--LSVLARIPEA-------PKALLLALHGLQG-----------SKEHI----LALLPGYAERGFLLL   55 (238)
T ss_dssp             EEEEEEEET---T--EEEEEEEESS-------CCEEEEEECCTTC-----------CHHHH----HHTSTTTGGGTEEEE
T ss_pred             EEEEEEEEC---C--EEEEecCCCC-------CCeEEEEeCCCCC-----------CHHHH----HHHHHHHHHCCCEEE
Confidence            456666653   3  4556666654       3699999999641           11111    123446788999999


Q ss_pred             EcCCCCCCCCCCCCC------CchhHHHHH----HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475          559 AGPSIPIIGEGDKLP------NDRFVEQLV----SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC  628 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~------~~~~~~~~~----~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~  628 (751)
                      ++|.   +|+|.+..      ...+.....    .++..+...+.....++..+++++|+|+||.+++.+++.+|+ +++
T Consensus        56 ~~D~---~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~  131 (238)
T d1ufoa_          56 AFDA---PRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRG  131 (238)
T ss_dssp             ECCC---TTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSC
T ss_pred             EecC---CCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhh
Confidence            9544   45554421      112222222    223333334444455678899999999999999999999975 455


Q ss_pred             EEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCC-CCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCC--
Q 004475          629 GIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK-IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA--  705 (751)
Q Consensus       629 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~--  705 (751)
                      +++..+........    ............+.+.++.....+ .++|+|++||++|..+|  +.++.+++++|++.+.  
T Consensus       132 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~  205 (238)
T d1ufoa_         132 VLAFIGSGFPMKLP----QGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEG  205 (238)
T ss_dssp             EEEESCCSSCCCCC----TTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTC
T ss_pred             eeeeeeeccccccc----cccccccccccchhhhhhhhhhhhhcCCCeEEEEcCCCCccC--HHHHHHHHHHHHhcCCCc
Confidence            55555443322111    111111222334445555554433 46899999999999999  9999999999988765  


Q ss_pred             cEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          706 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       706 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      .+++.+++|++|.+..     +..+.+.+||.++|.
T Consensus       206 ~~~~~~~~g~gH~~~~-----~~~~~~~~f~~~~l~  236 (238)
T d1ufoa_         206 RLARFVEEGAGHTLTP-----LMARVGLAFLEHWLE  236 (238)
T ss_dssp             CEEEEEETTCCSSCCH-----HHHHHHHHHHHHHHH
T ss_pred             eEEEEEECCCCCccCH-----HHHHHHHHHHHHHhc
Confidence            4788999999998752     456788899999885


No 24 
>d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]}
Probab=99.81  E-value=1.3e-18  Score=163.31  Aligned_cols=190  Identities=16%  Similarity=0.112  Sum_probs=135.8

Q ss_pred             EEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCC-----
Q 004475          498 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL-----  572 (751)
Q Consensus       498 ~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~-----  572 (751)
                      ++.|..     ..++|+||++||+|.           +...+    ..+...+ ..++.|++++.....+.+...     
T Consensus         5 i~~~~~-----~~~~P~vi~lHG~g~-----------~~~~~----~~~~~~l-~~~~~vv~p~~~~~~~~~~~~~~~~~   63 (202)
T d2h1ia1           5 VFQKGK-----DTSKPVLLLLHGTGG-----------NELDL----LPLAEIV-DSEASVLSVRGNVLENGMPRFFRRLA   63 (202)
T ss_dssp             EEECCS-----CTTSCEEEEECCTTC-----------CTTTT----HHHHHHH-HTTSCEEEECCSEEETTEEESSCEEE
T ss_pred             cCCCCC-----CCCCCEEEEECCCCC-----------CHHHH----HHHHHHh-ccCCceeeecccccCCCCccccccCC
Confidence            455644     345799999999641           11111    1233344 467888775432111110000     


Q ss_pred             C---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccccc
Q 004475          573 P---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF  649 (751)
Q Consensus       573 ~---~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~  649 (751)
                      .   .........+++...++++.++..+|+++|+++|+|+||.+++.+++.+|+.+.++++.+|.......        
T Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~--------  135 (202)
T d2h1ia1          64 EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM--------  135 (202)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC--------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccc--------
Confidence            0   11112334567778888888888899999999999999999999999999999999999987542111        


Q ss_pred             ccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHH
Q 004475          650 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI  729 (751)
Q Consensus       650 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~  729 (751)
                                      .......+|++++||++|++||  +..+++++++|++.+.++++++||+ +|.+.     .+.+
T Consensus       136 ----------------~~~~~~~~~~~i~~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-----~~~~  191 (202)
T d2h1ia1         136 ----------------QLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTMHWENR-GHQLT-----MGEV  191 (202)
T ss_dssp             ----------------CCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEEEEESS-TTSCC-----HHHH
T ss_pred             ----------------cccccccchhhcccccCCCccC--HHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHH
Confidence                            1123356899999999999999  9999999999999999999999997 79874     3567


Q ss_pred             HHHHHHHHHHh
Q 004475          730 WETDRWLQKYC  740 (751)
Q Consensus       730 ~~~~~fl~~~l  740 (751)
                      +.+.+||++.+
T Consensus       192 ~~~~~wl~k~f  202 (202)
T d2h1ia1         192 EKAKEWYDKAF  202 (202)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            88999999864


No 25 
>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]}
Probab=99.80  E-value=4.4e-19  Score=182.00  Aligned_cols=237  Identities=21%  Similarity=0.196  Sum_probs=166.2

Q ss_pred             EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475          482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP  561 (751)
Q Consensus       482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~  561 (751)
                      +.+.++..||.++.+.+|+|.+     .+++|+||+.||.|....          ... .........|+++||+|+.  
T Consensus         6 ~~v~ipmrDGv~L~~~vy~P~~-----~~~~P~il~~~pyg~~~~----------~~~-~~~~~~~~~~a~~GY~vv~--   67 (347)
T d1ju3a2           6 SNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDV----------FAW-STQSTNWLEFVRDGYAVVI--   67 (347)
T ss_dssp             EEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCC----------HHH-HTTSCCTHHHHHTTCEEEE--
T ss_pred             eCeEEECCCCCEEEEEEEEcCC-----CCCEEEEEEEcCCCCccc----------cCc-CcccHHHHHHHHCCCEEEE--
Confidence            5588999999999999999975     457999999998541100          000 0111235678999999999  


Q ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475          562 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT  641 (751)
Q Consensus       562 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~  641 (751)
                       .+.+|.|.+............|..++++|+.++++.| .||+++|+|+||++++.+|+..|..+++++..++..|....
T Consensus        68 -~d~RG~g~S~G~~~~~~~~~~d~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~~  145 (347)
T d1ju3a2          68 -QDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRA  145 (347)
T ss_dssp             -EECTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCC
T ss_pred             -EeeCCccccCCccccccchhhhHHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcccccceeeeeccccchhhhh
Confidence             5555666665443333445678889999999999877 69999999999999999999999999999999998774321


Q ss_pred             ccCccc-----ccc------------------------------------------------------cch---------
Q 004475          642 PFGFQT-----EFR------------------------------------------------------TLW---------  653 (751)
Q Consensus       642 ~~~~~~-----~~~------------------------------------------------------~~~---------  653 (751)
                      ......     ...                                                      .+|         
T Consensus       146 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (347)
T d1ju3a2         146 PWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP  225 (347)
T ss_dssp             CCSCTTCCCCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCC
T ss_pred             hhhhcCCccchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcc
Confidence            110000     000                                                      000         


Q ss_pred             hhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC------------c
Q 004475          654 EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA------------A  721 (751)
Q Consensus       654 ~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~------------~  721 (751)
                      ...+.+.+.++...+.++++|+|+++|..|..+    ..+.+.+++++. +.+.++++-|. +|...            .
T Consensus       226 ~~~~~w~~~~~~~~~~~i~vP~L~i~G~~D~~~----~~~~~~~~~~~~-~~~~~liigpw-~H~~~~~~~~~~~~g~~~  299 (347)
T d1ju3a2         226 DNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKD-NADARLVVGPW-SHSNLTGRNADRKFGIAA  299 (347)
T ss_dssp             SCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTT-TSCEEEEEEEE-ESSCCSSEETTEECCGGG
T ss_pred             cchhhhhcCCHHHHhhcCCCCEEEeccccCCCc----chhHHHHHHhhc-cCCceEEEcCc-cccCcccccCCCCCCccc
Confidence            001234455667778899999999999999874    456778887764 45778888876 35421            1


Q ss_pred             cccHHHHHHHHHHHHHHHhcCCC
Q 004475          722 RENVMHVIWETDRWLQKYCLSNT  744 (751)
Q Consensus       722 ~~~~~~~~~~~~~fl~~~l~~~~  744 (751)
                      .....+....+++||+++|+...
T Consensus       300 ~~~~~~~~~~~l~wfD~~LKg~~  322 (347)
T d1ju3a2         300 TYPIQEATTMHKAFFDRHLRGET  322 (347)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSCCT
T ss_pred             cccHHHHHHHHHHHHHHHhCCCC
Confidence            12345677788999999998543


No 26 
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.80  E-value=8.8e-18  Score=180.30  Aligned_cols=331  Identities=11%  Similarity=0.015  Sum_probs=198.8

Q ss_pred             CCcceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475            2 PFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP   81 (751)
Q Consensus         2 ~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~   81 (751)
                      ++..++|++|+.+    |+.+.++..+.  .+..|+|||||++|||++.           .+||+++..+|+..+++...
T Consensus        89 s~~~~~~l~d~~~----~~~~~l~~~~~--~~~~~~~SPDG~~ia~~~~-----------~~l~~~~~~~g~~~~~t~~~  151 (470)
T d2bgra1          89 SYTASYDIYDLNK----RQLITEERIPN--NTQWVTWSPVGHKLAYVWN-----------NDIYVKIEPNLPSYRITWTG  151 (470)
T ss_dssp             CEEEEEEEEETTT----TEECCSSCCCT--TEEEEEECSSTTCEEEEET-----------TEEEEESSTTSCCEECCSCC
T ss_pred             ccCceEEEEECCC----CcccccccCCc--cccccccccCcceeeEeec-----------ccceEEECCCCceeeeeecc
Confidence            5677899999999    99998885544  4789999999999999753           68999999999998887654


Q ss_pred             Cccc--c------------ceeeeeEEecCCcEEEEeecCCCCCCCC-----CCCCCCCCceeeccccccccchhhhhcc
Q 004475           82 DICL--N------------AVFGSFVWVNNSTLLIFTIPSSRRDPPK-----KTMVPLGPKIQSNEQKNIIISRMTDNLL  142 (751)
Q Consensus        82 ~~~~--~------------~~~~~~~wspDg~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (751)
                      ....  +            .....+.|||||++|+|...+.......     .......+......              
T Consensus       152 ~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~--------------  217 (470)
T d2bgra1         152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP--------------  217 (470)
T ss_dssp             BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE--------------
T ss_pred             CCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeec--------------
Confidence            3210  1            1123577999999999997654322100     00000000000000              


Q ss_pred             CCccchhhhhhheeeEEEEEcC-CCCceec------------CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCc
Q 004475          143 KDEYDESLFDYYTTAQLVLGSL-DGTAKDF------------GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFS  208 (751)
Q Consensus       143 ~~~~~~~~~~~~~~~~l~~~~~-~G~~~~l------------t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~  208 (751)
                       ++..+   .......++++++ ++....+            ... ..+..+.|+++++.+++.......       ...
T Consensus       218 -~~~~g---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~-------~~~  286 (470)
T d2bgra1         218 -YPKAG---AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN-------YSV  286 (470)
T ss_dssp             -CCBTT---SCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT-------EEE
T ss_pred             -ccccc---ccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCC-------ceE
Confidence             00000   0002256788888 4422211            111 345678999999877665443211       012


Q ss_pred             eeEEEEeCCCceeeeeccCCCCCCC-CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC
Q 004475          209 QKVQVWTTDGKLVRELCDLPPAEDI-PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE  287 (751)
Q Consensus       209 ~~l~~~d~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  287 (751)
                      ..++.+|..++....+......... ...+..  .......|+++++..+++.+..         +...+||+++.+   
T Consensus       287 ~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~s~~---------dg~~~ly~~~~~---  352 (470)
T d2bgra1         287 MDICDYDESSGRWNCLVARQHIEMSTTGWVGR--FRPSEPHFTLDGNSFYKIISNE---------EGYRHICYFQID---  352 (470)
T ss_dssp             EEEEEEETTTTEEEECGGGCEEEECSSSCSSS--SSCCCCEECTTSSEEEEEEECT---------TSCEEEEEEETT---
T ss_pred             EEEEEecCCCCcEEEEEEEeeeeeeccceeec--ccCCCceeeecCCCcEEEEecc---------CcCceeEEEecc---
Confidence            3466677777766655332111000 001110  1123457888888755665422         223589999986   


Q ss_pred             CCCceEeEeeceeEEEEEecCCceEEEeeeec---ccceeEEEecCCCCCCcceeeeecc---cccccCCCCCCCeeeCC
Q 004475          288 GEKPEILHKLDLRFSVSWCDDSLALVNETWYK---TSQTRTWLVCPGSKDVAPRVLFDRV---FENVYSDPGSPMMTRTS  361 (751)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~---~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~sp  361 (751)
                      ++....++.+...+...+++|++.|+|.++..   +...+||.++++++ ...+.|+..-   ...+..      ++|||
T Consensus       353 g~~~~~lt~g~~~v~~~~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~-~~~~~lt~~~~~~~~~~~s------~~fSp  425 (470)
T d2bgra1         353 KKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDY-TKVTCLSCELNPERCQYYS------VSFSK  425 (470)
T ss_dssp             CSCCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTCT-TCEEESSTTTSTTTBCBEE------EEECT
T ss_pred             CCceeeeccCCeeEEEEEEECCCEEEEEEecCCCCcceEEEEEEECCCC-CceeEecccccCCCCCEEE------EEECC
Confidence            77888888887777623677888998887532   24568999999885 4445554321   111122      78999


Q ss_pred             CCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeecc
Q 004475          362 TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN  413 (751)
Q Consensus       362 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~  413 (751)
                      ||++++.....                  ...+...+++..+|+..+++..+
T Consensus       426 dgky~~~~~s~------------------~~~P~~~l~~~~~g~~v~~le~n  459 (470)
T d2bgra1         426 EAKYYQLRCSG------------------PGLPLYTLHSSVNDKGLRVLEDN  459 (470)
T ss_dssp             TSSEEEEEECS------------------BSSCEEEEEETTTTEEEEEEECC
T ss_pred             CCCEEEEEecC------------------CCCCeEEEEECCCCCEEEEEecc
Confidence            99998887732                  12345677888888887776554


No 27 
>d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.80  E-value=5.1e-19  Score=177.77  Aligned_cols=226  Identities=17%  Similarity=0.058  Sum_probs=153.6

Q ss_pred             ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEE
Q 004475          480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL  558 (751)
Q Consensus       480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~  558 (751)
                      .++.++++..++ .+.+.+|.|+.       +.|+||++|||||..++.        ..+    ...+..++ ..|++|+
T Consensus        55 ~~~~~~i~~~~g-~i~~~iy~P~~-------~~P~il~iHGGg~~~g~~--------~~~----~~~~~~l~~~~g~~Vv  114 (311)
T d1jjia_          55 RVEDRTIKGRNG-DIRVRVYQQKP-------DSPVLVYYHGGGFVICSI--------ESH----DALCRRIARLSNSTVV  114 (311)
T ss_dssp             EEEEEEEEETTE-EEEEEEEESSS-------SEEEEEEECCSTTTSCCT--------GGG----HHHHHHHHHHHTSEEE
T ss_pred             eEEEEEEeCCCC-cEEEEEEcCCC-------CceEEEEEcCCCCccCCh--------hhh----hhhhhhhhhcCCcEEE
Confidence            467788887666 79999999964       369999999998764332        222    23444554 4699999


Q ss_pred             EcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEE
Q 004475          559 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIA  631 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~id~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~  631 (751)
                      .++|+...++        .....++|+..+++|+.++   ..+|++||+++|+|+||++++.++...    .....+.++
T Consensus       115 ~v~Yrlap~~--------~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l  186 (311)
T d1jjia_         115 SVDYRLAPEH--------KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL  186 (311)
T ss_dssp             EEECCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             Eecccccccc--------ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeee
Confidence            9777533322        2245678888999999875   358899999999999999998886543    235688888


Q ss_pred             ccCCCCCCCCccCccccc-cc-ch-----hhH-H---------HHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHH
Q 004475          632 RSGSYNKTLTPFGFQTEF-RT-LW-----EAT-N---------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE  694 (751)
Q Consensus       632 ~~~~~d~~~~~~~~~~~~-~~-~~-----~~~-~---------~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~  694 (751)
                      ++|..+............ .. .+     ... .         .....+|+....+..+|+||++|+.|.+    ..++.
T Consensus       187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l----~d~~~  262 (311)
T d1jjia_         187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPL----RDEGE  262 (311)
T ss_dssp             ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTT----HHHHH
T ss_pred             ecceeeeccCcccccccccccccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCC----hHHHH
Confidence            998877443211100000 00 00     000 0         0011245444434457999999999976    56789


Q ss_pred             HHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHH
Q 004475          695 RFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQ  737 (751)
Q Consensus       695 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~  737 (751)
                      .++++|+++|+++++++|++++|+|...    +...+.++++.+||.
T Consensus       263 ~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~  309 (311)
T d1jjia_         263 VFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV  309 (311)
T ss_dssp             HHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999987532    224566777788873


No 28 
>d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.79  E-value=2.9e-17  Score=155.17  Aligned_cols=212  Identities=18%  Similarity=0.179  Sum_probs=157.5

Q ss_pred             EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCC
Q 004475          484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI  563 (751)
Q Consensus       484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~  563 (751)
                      +.|+...| ++.+++..|..      .+.|++|++||.+...        ++  .........+..|+++||.|+.   +
T Consensus         3 v~i~g~~G-~Le~~~~~~~~------~~~~~~l~~Hp~p~~G--------G~--~~~~~~~~~a~~l~~~G~~~lr---f   62 (218)
T d2i3da1           3 VIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFG--------GT--MNNQIVYQLFYLFQKRGFTTLR---F   62 (218)
T ss_dssp             EEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGT--------CC--TTSHHHHHHHHHHHHTTCEEEE---E
T ss_pred             EEEeCCCc-cEEEEEeCCCC------CCCCEEEEECCCcCcC--------Cc--CCcHHHHHHHHHHHhcCeeEEE---E
Confidence            56777776 79998765543      2368999999854211        11  1111112356678899999999   6


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCcc
Q 004475          564 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF  643 (751)
Q Consensus       564 ~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~  643 (751)
                      +++|.|.+...........+|..++++|+..+...+ .++.++|+|+||.+++.++.+.+ ...++++..+......   
T Consensus        63 n~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~~-~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~---  137 (218)
T d2i3da1          63 NFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDS-KSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD---  137 (218)
T ss_dssp             CCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHCTTC-CCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC---
T ss_pred             ecCccCCCccccccchhHHHHHHHHHhhhhcccccc-cceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc---
Confidence            677887776655555677899999999999886533 57999999999999999998884 5566777766533211   


Q ss_pred             CcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCCcCCcc
Q 004475          644 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAAR  722 (751)
Q Consensus       644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~  722 (751)
                                           ...+....+|+|++||+.|.++|  .....++++.++. ++..++++++|+++|.|.  
T Consensus       138 ---------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~--  192 (218)
T d2i3da1         138 ---------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGANHFFN--  192 (218)
T ss_dssp             ---------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--
T ss_pred             ---------------------hhhccccCCCceeeecccceecC--hHHHHHHHHHHhhccCCCccEEEeCCCCCCCc--
Confidence                                 11234457899999999999999  9999999998876 456789999999999885  


Q ss_pred             ccHHHHHHHHHHHHHHHhcCCCC
Q 004475          723 ENVMHVIWETDRWLQKYCLSNTS  745 (751)
Q Consensus       723 ~~~~~~~~~~~~fl~~~l~~~~~  745 (751)
                      ....++.+.+.+||+++|.....
T Consensus       193 g~~~~l~~~v~~~l~~~l~~~~~  215 (218)
T d2i3da1         193 GKVDELMGECEDYLDRRLNGELV  215 (218)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCHHHHHHHHHHHHHHhcCCCCC
Confidence            45678899999999999976443


No 29 
>d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]}
Probab=99.78  E-value=2.4e-18  Score=177.54  Aligned_cols=249  Identities=14%  Similarity=0.177  Sum_probs=160.8

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      ...+.+.++..||+++.+.+|+|++     .+++|+||+.|+.|......    .................|+++||+|+
T Consensus        22 ~~~~~v~i~~rDG~~L~~~v~~P~~-----~~~~P~il~~~pYg~~~~~~----~~~~~~~~~~~~~~~~~~a~~Gy~vv   92 (381)
T d1mpxa2          22 YIKREVMIPMRDGVKLHTVIVLPKG-----AKNAPIVLTRTPYDASGRTE----RLASPHMKDLLSAGDDVFVEGGYIRV   92 (381)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTC----SSCCSSHHHHSCGGGHHHHHTTCEEE
T ss_pred             ceEEEEEEECCCCCEEEEEEEEeCC-----CCCccEEEEEccCCCCCccc----ccccccccccchhHHHHHHhCCCEEE
Confidence            3457799999999999999999976     45799999999754211100    00001111111234568899999999


Q ss_pred             EcCCCCCCCCCCCCCCc-----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004475          559 AGPSIPIIGEGDKLPND-----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC  627 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~~~-----------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~  627 (751)
                      .++.+   |.|.+....           ....+..+|..++++|+.++..++..||+++|+|+||++++.+|+..|..++
T Consensus        93 ~~d~R---G~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~  169 (381)
T d1mpxa2          93 FQDVR---GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALK  169 (381)
T ss_dssp             EEECT---TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEE
T ss_pred             EEecC---ccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccc
Confidence            95554   444432210           1122457899999999999987888999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCccCcc----ccc----------------------ccchh---------------------------
Q 004475          628 CGIARSGSYNKTLTPFGFQ----TEF----------------------RTLWE---------------------------  654 (751)
Q Consensus       628 ~~v~~~~~~d~~~~~~~~~----~~~----------------------~~~~~---------------------------  654 (751)
                      ++|+.+|+.|.........    ...                      ...+.                           
T Consensus       170 a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (381)
T d1mpxa2         170 VAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLT  249 (381)
T ss_dssp             EEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHH
T ss_pred             eeeeeccccccccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHh
Confidence            9999999877432111000    000                      00000                           


Q ss_pred             ----hHHHHHhcCccc--ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh---CCCcEEEEEeCCCCCcCCc----
Q 004475          655 ----ATNVYIEMSPIT--HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAA----  721 (751)
Q Consensus       655 ----~~~~~~~~~~~~--~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~----  721 (751)
                          ..+.+...++..  ...++++|+|+++|..|...+   ..+...++.+..   .+.+.++++-|. +|....    
T Consensus       250 ~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~---~~~~~~~~~~~~~~~~~~~~~LviGPw-~H~~~~~~~~  325 (381)
T d1mpxa2         250 EHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDM---WGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGS  325 (381)
T ss_dssp             HTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCS---SHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCS
T ss_pred             hCCCccchhhhcCchhhhhhccccCceEEEeccccCCcc---ccHHHHHHHHHHhccccCCceEEEecC-cCCCCccCCC
Confidence                001122223322  345689999999999998764   334555555543   456789999987 464211    


Q ss_pred             --------cc-cHHHHHHHHHHHHHHHhcCC
Q 004475          722 --------RE-NVMHVIWETDRWLQKYCLSN  743 (751)
Q Consensus       722 --------~~-~~~~~~~~~~~fl~~~l~~~  743 (751)
                              .+ ........+++||+++|+..
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg~  356 (381)
T d1mpxa2         326 ALGALNFEGDTARQFRHDVLRPFFDQYLVDG  356 (381)
T ss_dssp             EETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred             cCCccccccchhhhhHHHHHHHHHHHHhCCC
Confidence                    11 12334556789999999853


No 30 
>d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=99.78  E-value=1.7e-18  Score=174.40  Aligned_cols=233  Identities=18%  Similarity=0.131  Sum_probs=151.4

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC-eEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAV  557 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~v  557 (751)
                      ..++.+.++. +|.+|.+.+|.|++.    ++++|+||++|||||..++.        .    .....+..++.+| +.|
T Consensus        44 ~~~~~~~~~~-~g~~i~~~~y~P~~~----~~~~Pvvv~iHGGg~~~g~~--------~----~~~~~~~~~a~~~~~~v  106 (308)
T d1u4na_          44 AEVREFDMDL-PGRTLKVRMYRPEGV----EPPYPALVYYHGGGWVVGDL--------E----THDPVCRVLAKDGRAVV  106 (308)
T ss_dssp             SEEEEEEEEE-TTEEEEEEEEECTTC----CSSEEEEEEECCSTTTSCCT--------T----TTHHHHHHHHHHHTSEE
T ss_pred             CcEEEEEEec-CCceEEEEEEecccc----CCCCCEEEEEecCeeeeecc--------c----cccchhhhhhhcccccc
Confidence            4467777764 678899999999763    33689999999998764332        1    1224456667665 556


Q ss_pred             EEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEEE
Q 004475          558 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGI  630 (751)
Q Consensus       558 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v  630 (751)
                      +.++|+....        .......+|+..+++|+.++.   .+|++||+++|+|+||++++.++...++    .+.+..
T Consensus       107 ~~v~Yrl~p~--------~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~  178 (308)
T d1u4na_         107 FSVDYRLAPE--------HKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQL  178 (308)
T ss_dssp             EEECCCCTTT--------SCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEE
T ss_pred             cccccccccc--------cccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccc
Confidence            6666642221        223456789999999998753   5889999999999999999998876532    245555


Q ss_pred             EccCCCCCCCCccCcc-cccc-----cchhh---HHHH---------HhcCcccccCCCC-CCEEEEEcCCCCCCCCChH
Q 004475          631 ARSGSYNKTLTPFGFQ-TEFR-----TLWEA---TNVY---------IEMSPITHANKIK-KPILIIHGEVDDKVGLFPM  691 (751)
Q Consensus       631 ~~~~~~d~~~~~~~~~-~~~~-----~~~~~---~~~~---------~~~~~~~~~~~~~-~P~li~~G~~D~~vp~~~~  691 (751)
                      +..+..+......... ....     .....   ...+         ...++....+... +|+||+||+.|.+    ..
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l----~~  254 (308)
T d1u4na_         179 LIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPL----RD  254 (308)
T ss_dssp             EESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTT----HH
T ss_pred             ccccccccccccccchhhhccccccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCc----hH
Confidence            5555443221110000 0000     00000   0000         0111221112222 5899999999965    56


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc----ccHHHHHHHHHHHHHHHh
Q 004475          692 QAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYC  740 (751)
Q Consensus       692 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l  740 (751)
                      +++.++++|+++|++++++++|+++|+|...    +...+.++++.+||++.|
T Consensus       255 ~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L  307 (308)
T d1u4na_         255 VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL  307 (308)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence            7889999999999999999999999987542    234577888999998876


No 31 
>d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=6e-18  Score=161.56  Aligned_cols=135  Identities=19%  Similarity=0.172  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHH
Q 004475          580 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVY  659 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  659 (751)
                      ...+.+...++.+.+. .++.+||+++|+|+||.+|+.++.++|+.+++++++++.......   +...           
T Consensus        91 ~~~~~l~~li~~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~---~~~~-----------  155 (229)
T d1fj2a_          91 QAAENIKALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS---FPQG-----------  155 (229)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG---SCSS-----------
T ss_pred             HHHHHHHHHhhhhhhc-CCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc---cccc-----------
Confidence            3344445555555444 589999999999999999999999999999999999986421100   0000           


Q ss_pred             HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh--CCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          660 IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG--HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       660 ~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                          + ......++|+|++||++|.+||  ...+++.++.|++  .+.++++++|++.+|.+..     +.+..+.+||+
T Consensus       156 ----~-~~~~~~~~Pvli~hG~~D~~vp--~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~wL~  223 (229)
T d1fj2a_         156 ----P-IGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ-----QEMMDVKQFID  223 (229)
T ss_dssp             ----C-CCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH-----HHHHHHHHHHH
T ss_pred             ----c-cccccccCceeEEEcCCCCeeC--HHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCH-----HHHHHHHHHHH
Confidence                0 0112246899999999999999  9999999999987  4678999999999998752     55778999999


Q ss_pred             HHhc
Q 004475          738 KYCL  741 (751)
Q Consensus       738 ~~l~  741 (751)
                      ++|.
T Consensus       224 ~~Lp  227 (229)
T d1fj2a_         224 KLLP  227 (229)
T ss_dssp             HHSC
T ss_pred             hHCc
Confidence            9984


No 32 
>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]}
Probab=99.77  E-value=2.8e-17  Score=160.36  Aligned_cols=210  Identities=16%  Similarity=0.102  Sum_probs=134.3

Q ss_pred             ccCCceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC
Q 004475          476 LASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR  554 (751)
Q Consensus       476 ~~~~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  554 (751)
                      .+....+++++.+. .+.++.+++|+|+++++++  ++|+|+++||++....+.        .............+...+
T Consensus        17 ~~~g~~~~~~~~S~~~g~~~~~~v~lP~~y~~~~--~~Pvvv~lHG~g~~~~~~--------~~~~~~~~~~~~~~~~~~   86 (255)
T d1jjfa_          17 VPRGQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGSENDW--------FEGGGRANVIADNLIAEG   86 (255)
T ss_dssp             CCCCEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTTCCTTTT--------TTTTTCHHHHHHHHHHTT
T ss_pred             CCceEEEEEEEEecCCCCEEEEEEEeCCCCCCCC--CCcEEEEEecCCCChHHh--------hhhhHHHHHHHHHHHhhc
Confidence            33456788888864 5789999999999987655  599999999976322110        011111111122223222


Q ss_pred             ----eEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc--CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475          555 ----FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC  628 (751)
Q Consensus       555 ----~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~--~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~  628 (751)
                          +.+......   . ................+.+++.++.++  ..+|+++|++.|+|+||.+|+.++.++|++|++
T Consensus        87 ~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~  162 (255)
T d1jjfa_          87 KIKPLIIVTPNTN---A-AGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAY  162 (255)
T ss_dssp             SSCCCEEEEECCC---C-CCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSE
T ss_pred             cCCcceeeecccc---c-ccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccE
Confidence                333332211   1 011111122222233344555666554  347889999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 004475          629 GIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR  708 (751)
Q Consensus       629 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~  708 (751)
                      +++++|..+......                ..............|+++.||++|..++    ..++++++|++++.+++
T Consensus       163 v~~~sg~~~~~~~~~----------------~~~~~~~~~~~~~~~~~i~~G~~D~~~~----~~~~~~~~L~~~g~~~~  222 (255)
T d1jjfa_         163 IGPISAAPNTYPNER----------------LFPDGGKAAREKLKLLFIACGTNDSLIG----FGQRVHEYCVANNINHV  222 (255)
T ss_dssp             EEEESCCTTSCCHHH----------------HCTTTTHHHHHHCSEEEEEEETTCTTHH----HHHHHHHHHHHTTCCCE
T ss_pred             EEEEccCcCCccccc----------------ccccHHHHhhccCCcceEEeCCCCCCch----HHHHHHHHHHHCCCCEE
Confidence            999998754321100                0001111122345799999999999854    46789999999999999


Q ss_pred             EEEeCCCCCcC
Q 004475          709 LVLLPFEHHVY  719 (751)
Q Consensus       709 ~~~~~~~~H~~  719 (751)
                      +.++++++|.+
T Consensus       223 ~~~~~~ggH~~  233 (255)
T d1jjfa_         223 YWLIQGGGHDF  233 (255)
T ss_dssp             EEEETTCCSSH
T ss_pred             EEEECCCCcCH
Confidence            99999999985


No 33 
>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=1.2e-19  Score=170.42  Aligned_cols=191  Identities=14%  Similarity=0.074  Sum_probs=128.8

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|..+.+..+.|..     ....|+||++||.+..+           ..|..  ......|+++||.|++   +|.+|+
T Consensus        13 v~G~~i~y~~~~~~~-----~~~~~~vvllHG~~~~~-----------~~w~~--~~~~~~la~~gy~via---~D~~G~   71 (208)
T d1imja_          13 VQGQALFFREALPGS-----GQARFSVLLLHGIRFSS-----------ETWQN--LGTLHRLAQAGYRAVA---IDLPGL   71 (208)
T ss_dssp             ETTEEECEEEEECSS-----SCCSCEEEECCCTTCCH-----------HHHHH--HTHHHHHHHTTCEEEE---ECCTTS
T ss_pred             ECCEEEEEEEecCCC-----CCCCCeEEEECCCCCCh-----------hHHhh--hHHHHHHHHcCCeEEE---eecccc
Confidence            478888888888854     22367899999964211           11110  0124578899999999   555676


Q ss_pred             CCCCCCch---h-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC
Q 004475          569 GDKLPNDR---F-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG  644 (751)
Q Consensus       569 g~~~~~~~---~-~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~  644 (751)
                      |.+.....   + .....+++.++++.+      +..+++|+||||||.+|+.++.++|++++++|+.+|......    
T Consensus        72 G~S~~~~~~~~~~~~~~~~~l~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~----  141 (208)
T d1imja_          72 GHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI----  141 (208)
T ss_dssp             GGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----
T ss_pred             cCCCCCCcccccchhhhhhhhhhccccc------ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccccc----
Confidence            66533211   1 111123333444433      346899999999999999999999999999999988532110    


Q ss_pred             cccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcccc
Q 004475          645 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN  724 (751)
Q Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~  724 (751)
                                         ....+.++++|+|+++|++|.++|  ...     +.+. .-...++.++++++|... .+.
T Consensus       142 -------------------~~~~~~~i~~P~Lii~G~~D~~~~--~~~-----~~~~-~~~~~~~~~i~~~gH~~~-~~~  193 (208)
T d1imja_         142 -------------------NAANYASVKTPALIVYGDQDPMGQ--TSF-----EHLK-QLPNHRVLIMKGAGHPCY-LDK  193 (208)
T ss_dssp             -------------------CHHHHHTCCSCEEEEEETTCHHHH--HHH-----HHHT-TSSSEEEEEETTCCTTHH-HHC
T ss_pred             -------------------ccccccccccccccccCCcCcCCc--HHH-----HHHH-hCCCCeEEEECCCCCchh-hhC
Confidence                               011245688999999999999876  331     2222 235688999999999754 566


Q ss_pred             HHHHHHHHHHHHHH
Q 004475          725 VMHVIWETDRWLQK  738 (751)
Q Consensus       725 ~~~~~~~~~~fl~~  738 (751)
                      .+.+.+.+++||+.
T Consensus       194 p~~~~~~l~~Fl~~  207 (208)
T d1imja_         194 PEEWHTGLLDFLQG  207 (208)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            78899999999974


No 34 
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.77  E-value=5.3e-18  Score=169.85  Aligned_cols=212  Identities=15%  Similarity=0.071  Sum_probs=139.6

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .++.+|....+-+++        .|+||++||.|.              ....|...+...|+++||.|++   ++.+|+
T Consensus         7 ~g~~~i~y~~~G~~~--------~p~vvl~HG~~~--------------~~~~~~~~~~~~l~~~g~~vi~---~D~~G~   61 (297)
T d1q0ra_           7 SGDVELWSDDFGDPA--------DPALLLVMGGNL--------------SALGWPDEFARRLADGGLHVIR---YDHRDT   61 (297)
T ss_dssp             ETTEEEEEEEESCTT--------SCEEEEECCTTC--------------CGGGSCHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred             ECCEEEEEEEecCCC--------CCEEEEECCCCc--------------ChhHHHHHHHHHHHhCCCEEEE---EeCCCC
Confidence            467788887776543        588999999652              1222333456678899999999   566677


Q ss_pred             CCCCCCc-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC--
Q 004475          569 GDKLPND-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--  641 (751)
Q Consensus       569 g~~~~~~-----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~--  641 (751)
                      |.+....     ....+..+|+..+++.+      +.+++.++||||||.+++.+|.++|++++++|++++.......  
T Consensus        62 G~S~~~~~~~~~~~~~~~~~d~~~ll~~l------~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~  135 (297)
T d1q0ra_          62 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA  135 (297)
T ss_dssp             TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred             cccccccccccccccchhhhhhccccccc------cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchh
Confidence            7764321     13556666666666554      3468999999999999999999999999999998765321100  


Q ss_pred             -----------ccCccccc----------------------------------ccchhhHH-------HHH---------
Q 004475          642 -----------PFGFQTEF----------------------------------RTLWEATN-------VYI---------  660 (751)
Q Consensus       642 -----------~~~~~~~~----------------------------------~~~~~~~~-------~~~---------  660 (751)
                                 ........                                  ..++....       .+.         
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (297)
T d1q0ra_         136 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP  215 (297)
T ss_dssp             HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred             hhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhh
Confidence                       00000000                                  00000000       000         


Q ss_pred             ---------hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHH
Q 004475          661 ---------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE  731 (751)
Q Consensus       661 ---------~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~  731 (751)
                               ..+....++++++|+|+++|++|.++|  +..++.+.+.+    ...++++++++||.+. .+...++.+.
T Consensus       216 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~~~~~  288 (297)
T d1q0ra_         216 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLI----PTARLAEIPGMGHALP-SSVHGPLAEV  288 (297)
T ss_dssp             CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTS----TTEEEEEETTCCSSCC-GGGHHHHHHH
T ss_pred             hhhhhhhhccccchhhhhccCCceEEEEeCCCCCCC--HHHHHHHHHhC----CCCEEEEECCCCCcch-hhCHHHHHHH
Confidence                     001122456789999999999999998  88877776555    3568999999999875 5666777777


Q ss_pred             HHHHHHH
Q 004475          732 TDRWLQK  738 (751)
Q Consensus       732 ~~~fl~~  738 (751)
                      +++||+.
T Consensus       289 i~~~l~~  295 (297)
T d1q0ra_         289 ILAHTRS  295 (297)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            7777764


No 35 
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.76  E-value=2.3e-17  Score=163.58  Aligned_cols=246  Identities=13%  Similarity=0.112  Sum_probs=152.9

Q ss_pred             eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475            6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL   85 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~   85 (751)
                      +||++|+.+    |+.++||..+  ..+..|+|||||++|||+..++.    .....+||++++.+|+.++||.......
T Consensus        22 dl~~~d~~~----g~~~~Lt~~~--~~~~~p~~SPDG~~iaf~~~~~~----~~~~~~i~~~~~~~g~~~~lt~~~~~~~   91 (281)
T d1k32a2          22 DLWEHDLKS----GSTRKIVSNL--GVINNARFFPDGRKIAIRVMRGS----SLNTADLYFYNGENGEIKRITYFSGKST   91 (281)
T ss_dssp             EEEEEETTT----CCEEEEECSS--SEEEEEEECTTSSEEEEEEEEST----TCCEEEEEEEETTTTEEEECCCCCEEEE
T ss_pred             cEEEEECCC----CCEEEEecCC--CcccCEEECCCCCEEEEEEeeCC----CCCceEEEEEEecCCceEEeeecCCCcc
Confidence            799999999    9999998433  35789999999999999986432    1344789999999999999987764321


Q ss_pred             c--ceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           86 N--AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        86 ~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                      .  .....+.|||||+.|+|........                                           ....++.++
T Consensus        92 ~~~~~~~~~~~spdg~~l~~~~~~~~~~-------------------------------------------~~~~~~~~~  128 (281)
T d1k32a2          92 GRRMFTDVAGFDPDGNLIISTDAMQPFS-------------------------------------------SMTCLYRVE  128 (281)
T ss_dssp             TTEECSEEEEECTTCCEEEEECTTSSST-------------------------------------------TCCEEEEEE
T ss_pred             CccccccccccCCCCCEEEEEEccCCCc-------------------------------------------cceeeeeec
Confidence            1  1234779999999999984432111                                           113566777


Q ss_pred             CCC-CceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccC
Q 004475          164 LDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE  242 (751)
Q Consensus       164 ~~G-~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~  242 (751)
                      .++ ..+.....  .....|++||+.+++.............. .................++.....            
T Consensus       129 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------  193 (281)
T d1k32a2         129 NDGINFVPLNLG--PATHILFADGRRVIGRNTFELPHWKGYRG-GTRGKIWIEVNSGAFKKIVDMSTH------------  193 (281)
T ss_dssp             GGGTEEEECCSC--SCSEEEEETTEEEEEESCSCCTTSTTCCS-TTCCEEEEEEETTEEEEEECCSSC------------
T ss_pred             CCCceeEEecCC--ccceeeecCCCeEEEeeccccceeeeecc-CCcceeeeeccccceeeccCCccc------------
Confidence            744 44443322  22356777887777765443211111001 111222333333333333322222            


Q ss_pred             CCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCCceEEEeeeecccc
Q 004475          243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQ  322 (751)
Q Consensus       243 ~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~  322 (751)
                       ...+.++++  . +++..         ......+||+++++   ++..+.|+.........|||||+.|+|.+.     
T Consensus       194 -~~~~~~~~~--~-~~~~~---------~~~~~~~l~~~d~~---g~~~~~lt~~~~~~~~~~SpDG~~I~f~~~-----  252 (281)
T d1k32a2         194 -VSSPVIVGH--R-IYFIT---------DIDGFGQIYSTDLD---GKDLRKHTSFTDYYPRHLNTDGRRILFSKG-----  252 (281)
T ss_dssp             -CEEEEEETT--E-EEEEE---------CTTSSCEEEEEETT---SCSCEECCCCCSSCEEEEEESSSCEEEEET-----
T ss_pred             -cceeeeecc--c-cceec---------ccccccceEEEeCC---CCceEEeecCCCcccccCcCCCCEEEEEeC-----
Confidence             224466665  3 55544         12234589999997   777777776433222689999999999662     


Q ss_pred             eeEEEecCCCCCCcceeeee
Q 004475          323 TRTWLVCPGSKDVAPRVLFD  342 (751)
Q Consensus       323 ~~l~~~~~~~~~~~~~~l~~  342 (751)
                      ..||+++++++  +.+.|..
T Consensus       253 ~~l~~~d~~~g--~~~~i~~  270 (281)
T d1k32a2         253 GSIYIFNPDTE--KIEKIEI  270 (281)
T ss_dssp             TEEEEECTTTC--CEEECCC
T ss_pred             CEEEEEECCCC--CEEEecc
Confidence            36999999985  5566643


No 36 
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.76  E-value=1.4e-17  Score=172.88  Aligned_cols=240  Identities=15%  Similarity=0.092  Sum_probs=151.1

Q ss_pred             CCceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCC--CchHHHHHHhCCe
Q 004475          478 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TPTSSLIFLARRF  555 (751)
Q Consensus       478 ~~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~  555 (751)
                      .++.|++.+.+.||..+..+.+..........++.|+||++||.+..+           ..|...  ...++..|+++||
T Consensus        24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~-----------~~~~~~~~~~sla~~L~~~Gy   92 (377)
T d1k8qa_          24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-----------TNWISNLPNNSLAFILADAGY   92 (377)
T ss_dssp             TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-----------GGGSSSCTTTCHHHHHHHTTC
T ss_pred             CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccch-----------hHHhhcCccchHHHHHHHCCC
Confidence            356788899999998877765532222222344579999999964211           122111  1246778899999


Q ss_pred             EEEEcCCCCCCCCCCCCCCc------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 004475          556 AVLAGPSIPIIGEGDKLPND------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP  623 (751)
Q Consensus       556 ~v~~~~~~~~~g~g~~~~~~------------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p  623 (751)
                      .|++   .+.+|+|.+....            .+.+....|+.++++++++...  .+++.++||||||.+++.++..+|
T Consensus        93 ~V~~---~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g--~~~v~lvGhS~GG~ia~~~a~~~p  167 (377)
T d1k8qa_          93 DVWL---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNP  167 (377)
T ss_dssp             EEEE---CCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCH
T ss_pred             EEEE---EcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC--CCCEEEEEecchHHHHHHHHHhhh
Confidence            9999   6667877764211            1233456788999999987633  368999999999999999999998


Q ss_pred             CceeEEEEcc---CCCCCCCCcc--Cc-------------------cc-------------c-c---------------c
Q 004475          624 HLFCCGIARS---GSYNKTLTPF--GF-------------------QT-------------E-F---------------R  650 (751)
Q Consensus       624 ~~~~~~v~~~---~~~d~~~~~~--~~-------------------~~-------------~-~---------------~  650 (751)
                      +.++++++..   +.........  ..                   ..             . .               .
T Consensus       168 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (377)
T d1k8qa_         168 KLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFD  247 (377)
T ss_dssp             HHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCC
T ss_pred             hhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCC
Confidence            8755444433   2211000000  00                   00             0 0               0


Q ss_pred             cc-h--hhHH----------------HHHh-------------------------cCcccccCCCCCCEEEEEcCCCCCC
Q 004475          651 TL-W--EATN----------------VYIE-------------------------MSPITHANKIKKPILIIHGEVDDKV  686 (751)
Q Consensus       651 ~~-~--~~~~----------------~~~~-------------------------~~~~~~~~~~~~P~li~~G~~D~~v  686 (751)
                      .. +  ....                .+.+                         ..+...+.++++|+|+++|++|.++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~  327 (377)
T d1k8qa_         248 TMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA  327 (377)
T ss_dssp             GGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSS
T ss_pred             cccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCcc
Confidence            00 0  0000                0000                         0111235678999999999999999


Q ss_pred             CCChHHHHHHHHHHHhCCCcEEEEEeCCCCCc--CCccccHHHHHHHHHHHHHH
Q 004475          687 GLFPMQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       687 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~  738 (751)
                      |  ++.++.+.+.++.   .+++++++++||.  +...+..++++..|++||++
T Consensus       328 ~--~~~~~~l~~~lp~---~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~  376 (377)
T d1k8qa_         328 D--PHDVDLLLSKLPN---LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT  376 (377)
T ss_dssp             C--HHHHHHHHTTCTT---EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred             C--HHHHHHHHHHCCC---CeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence            8  8887777665532   3678899999996  22245577889999999974


No 37 
>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75  E-value=2.6e-18  Score=168.83  Aligned_cols=192  Identities=13%  Similarity=0.099  Sum_probs=122.5

Q ss_pred             CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004475          511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE  590 (751)
Q Consensus       511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~  590 (751)
                      +.|+|||+|||||......      ...+..+...+...++++||.|+.++|+...+.        .....++|+..+++
T Consensus        30 ~~~~vv~iHGGg~~~~~~~------~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~--------~~~~~~~d~~~~~~   95 (263)
T d1vkha_          30 TREAVIYIHGGAWNDPENT------PNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNIT   95 (263)
T ss_dssp             CCEEEEEECCSTTTCTTCC------GGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCccCCCCC------cchHHHHHHHHHHHHHhCCeEEEEeccccCcch--------hhhHHHHhhhhhhh
Confidence            4799999999987543211      111211111233455678999999777532221        12456889999999


Q ss_pred             HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----------------ceeEEEEccCCCCCCCCccCccc------
Q 004475          591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----------------LFCCGIARSGSYNKTLTPFGFQT------  647 (751)
Q Consensus       591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-----------------~~~~~v~~~~~~d~~~~~~~~~~------  647 (751)
                      |+.+..  +..+|+|+|||+||++|+.++...++                 .+.+.+...+.++..........      
T Consensus        96 ~l~~~~--~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (263)
T d1vkha_          96 RLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR  173 (263)
T ss_dssp             HHHHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred             cccccc--cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccccchhhh
Confidence            998874  56799999999999999999876533                 23455555554431100000000      


Q ss_pred             ----ccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC
Q 004475          648 ----EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA  720 (751)
Q Consensus       648 ----~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~  720 (751)
                          .....|..............+.++.+|+|++||++|.+||  +.++.+++++|++.+++++++++++++|...
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~  248 (263)
T d1vkha_         174 LAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLGLHNDV  248 (263)
T ss_dssp             HHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCCSGGGG
T ss_pred             cccccccccccccccccCccccccccccCCCeeeeecCCCcccC--HHHHHHHHHHHHHCCCCEEEEEECCCCchhh
Confidence                0000000000000000112234567999999999999999  9999999999999999999999999999754


No 38 
>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
Probab=99.75  E-value=2.7e-17  Score=171.00  Aligned_cols=242  Identities=21%  Similarity=0.210  Sum_probs=165.4

Q ss_pred             CCc--eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCccc-------------------------------------CC
Q 004475          490 DGV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDA-------------------------------------AG  530 (751)
Q Consensus       490 ~~~--~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~-------------------------------------~~  530 (751)
                      ||+  .+.+.+|+|..     .++.|+|+..+..+......                                     ..
T Consensus        37 DG~~d~l~~di~rP~~-----~~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (405)
T d1lnsa3          37 RGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELP  111 (405)
T ss_dssp             SSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCC
T ss_pred             CCCEeEEEEEEEccCC-----CCCceEEEEeCCcCCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence            677  59999999986     34699999887754211000                                     00


Q ss_pred             cccCCC-CccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCC---------
Q 004475          531 QVRGSP-NEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVAD---------  599 (751)
Q Consensus       531 ~~~~~~-~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~id---------  599 (751)
                      .....+ .....+......+|+.+||+|+.   .+.+|.|.+.+.. .+.....+|..++|+|+.++...+         
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~GYavv~---~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~  188 (405)
T d1lnsa3         112 IVDKAPYRFTHGWTYSLNDYFLTRGFASIY---VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEI  188 (405)
T ss_dssp             EESSCSCBCCCCCCCHHHHHHHTTTCEEEE---ECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEE
T ss_pred             ccccccccccccccccchHHHHhCCCEEEE---ECCCCCCCCCCccccCChhhhhhHHHHHHHHHhcccccccccccccc
Confidence            000011 11122334566789999999999   5555666664432 233466889999999998653322         


Q ss_pred             -----CCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC---------CccCccccc-----------c----
Q 004475          600 -----PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTEF-----------R----  650 (751)
Q Consensus       600 -----~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~---------~~~~~~~~~-----------~----  650 (751)
                           ..||+++|.|+||++++.+|+..|..++|+|..++..|...         ....+....           .    
T Consensus       189 ~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (405)
T d1lnsa3         189 KASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGA  268 (405)
T ss_dssp             CCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHH
T ss_pred             cccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccc
Confidence                 24899999999999999999999999999999998876210         000000000           0    


Q ss_pred             ----------------------cchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 004475          651 ----------------------TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR  708 (751)
Q Consensus       651 ----------------------~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~  708 (751)
                                            ......+.+.+.++..++++|++|+|+++|..|..++  +.++.+++++++. +.+.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~--~~~~~~~y~al~~-~~~~~  345 (405)
T d1lnsa3         269 DFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GHAKH  345 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TCCEE
T ss_pred             hhhhchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCC--HHHHHHHHHHHHh-CCCcE
Confidence                                  0001123456678888899999999999999999988  8999999998864 56788


Q ss_pred             EEEeCCCCCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475          709 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN  743 (751)
Q Consensus       709 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~  743 (751)
                      +++-|+ +|.........++.+.+++||+++|+..
T Consensus       346 Lilgpw-~H~~~~~~~~~d~~~~~~~wFD~~LkG~  379 (405)
T d1lnsa3         346 AFLHRG-AHIYMNSWQSIDFSETINAYFVAKLLDR  379 (405)
T ss_dssp             EEEESC-SSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred             EEEeCC-CCCCCcccccchHHHHHHHHHHHHhCCC
Confidence            998886 6875433333456778899999999753


No 39 
>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]}
Probab=99.74  E-value=8.8e-18  Score=162.79  Aligned_cols=231  Identities=13%  Similarity=0.021  Sum_probs=146.4

Q ss_pred             CCccCCceEEEEEEcCC-CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh
Q 004475          474 PTLASLQKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA  552 (751)
Q Consensus       474 ~~~~~~~~e~i~~~~~~-~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  552 (751)
                      |+.+..+.+++.+.+.. +.++.+++|+|++++.   .++|+||++||+++...              .........+.+
T Consensus         8 p~~~~~~~~~~~~~S~~lg~~~~~~v~~P~~~~~---~~~Pvvv~lhG~~~~~~--------------~~~~~~l~~l~~   70 (246)
T d3c8da2           8 PQAPEIPAKEIIWKSERLKNSRRVWIFTTGDVTA---EERPLAVLLDGEFWAQS--------------MPVWPVLTSLTH   70 (246)
T ss_dssp             CCCCSSCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHHT--------------SCCHHHHHHHHH
T ss_pred             CCCCCCCcEEEEEECCCCCCEEEEEEEECCCCCC---CCCCEEEEeCCcchhcc--------------CcHHHHHHHHHH
Confidence            34444567888888753 7789999999998753   24999999999753210              001123445565


Q ss_pred             CC----eEEEEcCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004475          553 RR----FAVLAGPSIPIIGEG-DKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC  627 (751)
Q Consensus       553 ~G----~~v~~~~~~~~~g~g-~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~  627 (751)
                      +|    ++++.++........ .......+...+.+++...++... +..+|+++++++|+||||++|+.++.++|++|+
T Consensus        71 ~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~-~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~  149 (246)
T d3c8da2          71 RQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIA-PFSDRADRTVVAGQSFGGLSALYAGLHWPERFG  149 (246)
T ss_dssp             TTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHS-CCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCC
T ss_pred             hCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhc-ccccCccceEEEecCchhHHHhhhhccCCchhc
Confidence            55    334442221110000 001122333444444444443321 234688999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcE
Q 004475          628 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS  707 (751)
Q Consensus       628 ~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~  707 (751)
                      ++++++|.++.......          ....+.+..+.....+..+|+++.+|..|..+   ...+++++++|+++|.++
T Consensus       150 a~~~~sg~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~---~~~~~~l~~~L~~~g~~~  216 (246)
T d3c8da2         150 CVLSQSGSYWWPHRGGQ----------QEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESI  216 (246)
T ss_dssp             EEEEESCCTTTTCTTSS----------SCCHHHHHHHTTSSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSE
T ss_pred             EEEcCCcccccccCCcc----------chHHHHHHhhhhhhhccCCCeEEEecCCCcch---hHHHHHHHHHHHHCCCCE
Confidence            99999998764322110          11122233344556667899999999999876   477889999999999999


Q ss_pred             EEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          708 RLVLLPFEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       708 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      ++.++|| +|.+.   .+...+...+.||-+.
T Consensus       217 ~~~~~~G-gH~~~---~W~~~l~~~l~~l~~~  244 (246)
T d3c8da2         217 FWRQVDG-GHDAL---CWRGGLMQGLIDLWQP  244 (246)
T ss_dssp             EEEEESC-CSCHH---HHHHHHHHHHHHHHGG
T ss_pred             EEEEeCC-CCChH---HHHHHHHHHHHHHHHh
Confidence            9999998 79753   3556666666666544


No 40 
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]}
Probab=99.74  E-value=6.3e-17  Score=152.10  Aligned_cols=178  Identities=16%  Similarity=0.101  Sum_probs=122.8

Q ss_pred             CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC----CC-CCCC---CchhHHHHH
Q 004475          511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG----EG-DKLP---NDRFVEQLV  582 (751)
Q Consensus       511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g----~g-~~~~---~~~~~~~~~  582 (751)
                      ++|+||++||.|.           +...+    ..+...++ .++.++++.......    +. ....   .........
T Consensus        22 ~~p~vv~lHG~g~-----------~~~~~----~~l~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (209)
T d3b5ea1          22 SRECLFLLHGSGV-----------DETTL----VPLARRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAET   85 (209)
T ss_dssp             CCCEEEEECCTTB-----------CTTTT----HHHHHHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHH
T ss_pred             CCCEEEEEcCCCC-----------CHHHH----HHHHHHhc-cCcEEEeeccCcCcccCccccccCCccccchhhHHHHH
Confidence            4799999999752           11112    13344444 467777643321110    10 0000   111223345


Q ss_pred             HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhc
Q 004475          583 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEM  662 (751)
Q Consensus       583 ~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  662 (751)
                      +++.+.|+.+.++..+|.+||+++|||+||.+|+.++.++|+.++++++++|.......                     
T Consensus        86 ~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~~---------------------  144 (209)
T d3b5ea1          86 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV---------------------  144 (209)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC---------------------
T ss_pred             HHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccccc---------------------
Confidence            66667777777777789999999999999999999999999999999999996432111                     


Q ss_pred             CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          663 SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       663 ~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                         ......++|+|++||+.|+++|   ..+.++.+.|++.|.+++++++++ +|.+..     ..+..+.+||.
T Consensus       145 ---~~~~~~~~p~~~~~G~~D~~~~---~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~~-----~~~~~~~~wl~  207 (209)
T d3b5ea1         145 ---PATDLAGIRTLIIAGAADETYG---PFVPALVTLLSRHGAEVDARIIPS-GHDIGD-----PDAAIVRQWLA  207 (209)
T ss_dssp             ---CCCCCTTCEEEEEEETTCTTTG---GGHHHHHHHHHHTTCEEEEEEESC-CSCCCH-----HHHHHHHHHHH
T ss_pred             ---cccccccchheeeeccCCCccC---HHHHHHHHHHHHCCCCeEEEEECC-CCCCCH-----HHHHHHHHHhC
Confidence               0112346899999999999985   567788999999999999999998 698852     44567788884


No 41 
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.74  E-value=9.3e-18  Score=167.00  Aligned_cols=215  Identities=19%  Similarity=0.160  Sum_probs=139.3

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475          488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG  567 (751)
Q Consensus       488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g  567 (751)
                      ..+|.+|....+-.++       ..|+||++||++..+           ..+    ......++++||.|++   ++.+|
T Consensus         8 ~~~g~~i~y~~~g~~~-------~~~~iv~lHG~~g~~-----------~~~----~~~~~~~~~~~~~vi~---~D~~G   62 (290)
T d1mtza_           8 KVNGIYIYYKLCKAPE-------EKAKLMTMHGGPGMS-----------HDY----LLSLRDMTKEGITVLF---YDQFG   62 (290)
T ss_dssp             EETTEEEEEEEECCSS-------CSEEEEEECCTTTCC-----------SGG----GGGGGGGGGGTEEEEE---ECCTT
T ss_pred             EECCEEEEEEEcCCCC-------CCCeEEEECCCCCch-----------HHH----HHHHHHHHHCCCEEEE---EeCCC
Confidence            3578888777765432       258999999964111           111    1233456778999999   66778


Q ss_pred             CCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCC---
Q 004475          568 EGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---  641 (751)
Q Consensus       568 ~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~---  641 (751)
                      +|.+.....   .....++|+.++++.+..     .+++.++||||||.+|+.+|.++|++++++++.++.......   
T Consensus        63 ~G~S~~~~~~~~~~~~~~~~l~~ll~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~  137 (290)
T d1mtza_          63 CGRSEEPDQSKFTIDYGVEEAEALRSKLFG-----NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKE  137 (290)
T ss_dssp             STTSCCCCGGGCSHHHHHHHHHHHHHHHHT-----TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHH
T ss_pred             Cccccccccccccccchhhhhhhhhccccc-----ccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhh
Confidence            887754322   345667777777766632     358999999999999999999999999999998876321000   


Q ss_pred             --------cc-------------Cccccc---------------ccchh-----hHHH------HH--------------
Q 004475          642 --------PF-------------GFQTEF---------------RTLWE-----ATNV------YI--------------  660 (751)
Q Consensus       642 --------~~-------------~~~~~~---------------~~~~~-----~~~~------~~--------------  660 (751)
                              ..             ......               ...+.     ....      +.              
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (290)
T d1mtza_         138 MNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTI  217 (290)
T ss_dssp             HHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTT
T ss_pred             hhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhh
Confidence                    00             000000               00000     0000      00              


Q ss_pred             -hcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          661 -EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       661 -~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                       ..+....+.++++|+|+++|++|.++|   ..++.+.+.++    .+++++++++||... .+..+.+.+.+.+||.+|
T Consensus       218 ~~~~~~~~~~~i~~P~l~i~G~~D~~~~---~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~FL~~h  289 (290)
T d1mtza_         218 KDWDITDKISAIKIPTLITVGEYDEVTP---NVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFILKH  289 (290)
T ss_dssp             TTCBCTTTGGGCCSCEEEEEETTCSSCH---HHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred             hcccHHHHhhcccceEEEEEeCCCCCCH---HHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHHHh
Confidence             001122345678999999999998764   55666665553    458999999999876 566788999999999987


Q ss_pred             h
Q 004475          740 C  740 (751)
Q Consensus       740 l  740 (751)
                      +
T Consensus       290 ~  290 (290)
T d1mtza_         290 L  290 (290)
T ss_dssp             C
T ss_pred             C
Confidence            5


No 42 
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}
Probab=99.72  E-value=1.7e-16  Score=157.28  Aligned_cols=222  Identities=16%  Similarity=0.087  Sum_probs=135.7

Q ss_pred             eEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEc
Q 004475          481 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG  560 (751)
Q Consensus       481 ~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~  560 (751)
                      .-+.+++ .+...+++...-+++        .|+||++||.|..           ...+..|. .+...| ++||.|++ 
T Consensus         4 ~~~~~~~-~~~~~~h~~~~G~~~--------~p~ivllHG~~~~-----------~~~~~~~~-~~~~~L-~~~~~vi~-   60 (281)
T d1c4xa_           4 IIEKRFP-SGTLASHALVAGDPQ--------SPAVVLLHGAGPG-----------AHAASNWR-PIIPDL-AENFFVVA-   60 (281)
T ss_dssp             CEEEEEC-CTTSCEEEEEESCTT--------SCEEEEECCCSTT-----------CCHHHHHG-GGHHHH-HTTSEEEE-
T ss_pred             EEEEEEc-cCCEEEEEEEEecCC--------CCEEEEECCCCCC-----------CcHHHHHH-HHHHHH-hCCCEEEE-
Confidence            3344454 345678877776543        5899999996411           11111111 223333 56999999 


Q ss_pred             CCCCCCCCCCCCCCc---hh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475          561 PSIPIIGEGDKLPND---RF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY  636 (751)
Q Consensus       561 ~~~~~~g~g~~~~~~---~~-~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~  636 (751)
                        ++.+|+|.+....   .. .......+..+++.+.+..   .+++.++||||||.+|+.+|.++|++++++|++++..
T Consensus        61 --~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~  135 (281)
T d1c4xa_          61 --PDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFG---IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVG  135 (281)
T ss_dssp             --ECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHT---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred             --EeCCCCccccccccccccchhhHHHhhhhccccccccc---cccceeccccccccccccccccccccccceEEecccc
Confidence              6667888774321   11 1222222223333333322   3589999999999999999999999999999988753


Q ss_pred             CCCCCcc-------C------------------ccccc-ccchh----------hH-------HHHH--------hcCcc
Q 004475          637 NKTLTPF-------G------------------FQTEF-RTLWE----------AT-------NVYI--------EMSPI  665 (751)
Q Consensus       637 d~~~~~~-------~------------------~~~~~-~~~~~----------~~-------~~~~--------~~~~~  665 (751)
                      .......       .                  ..... .....          ..       ..+.        .....
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (281)
T d1c4xa_         136 APMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPP  215 (281)
T ss_dssp             SCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCH
T ss_pred             CccccchhHHHHHHHhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccch
Confidence            2111000       0                  00000 00000          00       0000        01112


Q ss_pred             cccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          666 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       666 ~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      ..+.++++|+|+++|++|..+|  +..++.+.+.++    .+++++++++||... .+..+++.+.+++||+
T Consensus       216 ~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~  280 (281)
T d1c4xa_         216 ATLGRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFR  280 (281)
T ss_dssp             HHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHH
T ss_pred             hhhhhhccceEEEEeCCCCCcC--HHHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHhC
Confidence            3457789999999999999998  888877776553    468999999999876 5677889999999986


No 43 
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}
Probab=99.70  E-value=6.8e-16  Score=152.10  Aligned_cols=215  Identities=16%  Similarity=0.122  Sum_probs=139.8

Q ss_pred             EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC
Q 004475          485 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP  564 (751)
Q Consensus       485 ~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~  564 (751)
                      ++.+.||.+|+...+-|++        .|+||++||.+..           ...|    ......|+++||.|++   ++
T Consensus         2 ~i~~~dG~~l~y~~~G~~~--------~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~---~D   55 (275)
T d1a88a_           2 TVTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLS-----------ADDW----DNQMLFFLSHGYRVIA---HD   55 (275)
T ss_dssp             EEECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEE---EC
T ss_pred             EEEecCCCEEEEEEecCCC--------CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEE---Ee
Confidence            3567899999999998754        3678999996421           1111    2446678899999999   56


Q ss_pred             CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeCh-HHHHHHHHHHhCCCceeEEEEccCCCCCCCC
Q 004475          565 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY-GAFMTAHLLAHAPHLFCCGIARSGSYNKTLT  641 (751)
Q Consensus       565 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~-GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~  641 (751)
                      .+|+|.+...  ........+|+.++++.+      +.+++.++|||+ ||.+++.++.++|++++++|++++.......
T Consensus        56 ~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~  129 (275)
T d1a88a_          56 RRGHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVK  129 (275)
T ss_dssp             CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBC
T ss_pred             cccccccccccccccccccccccccccccc------cccccccccccccccchhhcccccCcchhhhhhhhccccccccc
Confidence            6677776432  223566677777777766      235788899987 5666777788999999999998864321110


Q ss_pred             c-cC---ccc-------------------------------cccc--------chhh------------HHHHHhcCccc
Q 004475          642 P-FG---FQT-------------------------------EFRT--------LWEA------------TNVYIEMSPIT  666 (751)
Q Consensus       642 ~-~~---~~~-------------------------------~~~~--------~~~~------------~~~~~~~~~~~  666 (751)
                      . ..   ...                               ....        .+..            ...+.......
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
T d1a88a_         130 SDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTD  209 (275)
T ss_dssp             BTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHH
T ss_pred             chhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhH
Confidence            0 00   000                               0000        0000            00011122223


Q ss_pred             ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          667 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       667 ~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      .+.++++|+|+++|++|..+|  .....+....+   ..++++++++++||... .+..+++.+.+.+||+
T Consensus       210 ~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~  274 (275)
T d1a88a_         210 DLKRIDVPVLVAHGTDDQVVP--YADAAPKSAEL---LANATLKSYEGLPHGML-STHPEVLNPDLLAFVK  274 (275)
T ss_dssp             HHHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred             HHHhhccccceeecCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCchH-HhCHHHHHHHHHHHHc
Confidence            456789999999999999998  65544443332   23578999999999876 5678889999999986


No 44 
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.70  E-value=3.1e-16  Score=155.76  Aligned_cols=242  Identities=13%  Similarity=0.036  Sum_probs=157.0

Q ss_pred             CceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475          479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV  557 (751)
Q Consensus       479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v  557 (751)
                      .+++.+++++. .+..+...++.|.+       ++|+|+++||++...         ....+.. .......+.+.|+++
T Consensus         7 ~~v~~~~~~s~~~~r~~~~~v~~p~~-------~~Pvl~llhG~~~~~---------d~~~~~~-~~~~~~~~~~~~~~~   69 (288)
T d1sfra_           7 LPVEYLQVPSPSMGRDIKVQFQSGGA-------NSPALYLLDGLRAQD---------DFSGWDI-NTPAFEWYDQSGLSV   69 (288)
T ss_dssp             CCCEEEEEEETTTTEEEEEEEECCST-------TBCEEEEECCTTCCS---------SSCHHHH-HCCHHHHHTTSSCEE
T ss_pred             CEEEEEEEECCCCCcEEEEEEeCCCC-------CceEEEEcCCCCCCC---------cchhhhh-hccHHHHHHhCCCEE
Confidence            45677777753 45678888877743       599999999964210         0001100 002344566789999


Q ss_pred             EEcCCCCCCCCCCCCC---------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475          558 LAGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC  628 (751)
Q Consensus       558 ~~~~~~~~~g~g~~~~---------~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~  628 (751)
                      +.++......++....         ...+...   -+.+++.+|.++..+|+++++|+|+||||++|+.+++++|++|++
T Consensus        70 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~a  146 (288)
T d1sfra_          70 VMPVGGQSSFYSDWYQPACGKAGCQTYKWETF---LTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVY  146 (288)
T ss_dssp             EEECCCTTCTTCBCSSCEEETTEEECCBHHHH---HHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEE
T ss_pred             EEeccCCCCCCccccCcccccccccchhHHHH---HHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccE
Confidence            9866533322222111         1122222   345777888888779999999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCccCcccc------c----ccch--hhHHHHHhcCcccccCC---CCCCEEEEEcCCCCCCCCC----
Q 004475          629 GIARSGSYNKTLTPFGFQTE------F----RTLW--EATNVYIEMSPITHANK---IKKPILIIHGEVDDKVGLF----  689 (751)
Q Consensus       629 ~v~~~~~~d~~~~~~~~~~~------~----~~~~--~~~~~~~~~~~~~~~~~---~~~P~li~~G~~D~~vp~~----  689 (751)
                      +++++|.++...........      .    ...+  .....+...+|..++++   ..+++++.+|..|..++..    
T Consensus       147 v~~~Sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~  226 (288)
T d1sfra_         147 AGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLP  226 (288)
T ss_dssp             EEEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHH
T ss_pred             EEEecCcccccccccchhhhhhhhhcccccHhhhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccc
Confidence            99999987744322110000      0    0000  11123445555554433   2578999999999876510    


Q ss_pred             --------hHHHHHHHHHHHhCCCcEEEEEeCCC-CCcCCccccHHHHHHHHHHHHHHHhcCC
Q 004475          690 --------PMQAERFFDALKGHGALSRLVLLPFE-HHVYAARENVMHVIWETDRWLQKYCLSN  743 (751)
Q Consensus       690 --------~~~~~~~~~~l~~~~~~~~~~~~~~~-~H~~~~~~~~~~~~~~~~~fl~~~l~~~  743 (751)
                              ..+++++.++|.++|.++++..+++. +|.+.   .+...+.+++.||.+.|+..
T Consensus       227 ~~~~e~~~~~~~~~l~~~l~~~g~~~~~~~~~~~G~H~w~---~w~~~l~~~l~~l~~alg~~  286 (288)
T d1sfra_         227 AKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGAT  286 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTCC
T ss_pred             cchhHHHHHHHHHHHHHHHHHCCCCeEEEEECCCCccChh---HHHHHHHHHHHHHHHhcCCC
Confidence                    25678899999999999999998865 69853   35566777889999988754


No 45 
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.70  E-value=7.2e-17  Score=155.28  Aligned_cols=201  Identities=13%  Similarity=0.115  Sum_probs=128.8

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC--CchhHHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAV  589 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v  589 (751)
                      .++||++||.+           ++...+    ..++..|+++||.|++   ++.+|+|.+..  ..........+...++
T Consensus        11 ~~~vvliHG~~-----------~~~~~~----~~l~~~L~~~G~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~   72 (242)
T d1tqha_          11 ERAVLLLHGFT-----------GNSADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY   72 (242)
T ss_dssp             SCEEEEECCTT-----------CCTHHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred             CCeEEEECCCC-----------CCHHHH----HHHHHHHHHCCCEEEE---EeCCCCccccccccccchhHHHHHHHHHH
Confidence            36788999964           111222    2456788999999999   66678876532  1222344556666677


Q ss_pred             HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC--c-------ccccccchh------
Q 004475          590 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG--F-------QTEFRTLWE------  654 (751)
Q Consensus       590 ~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~--~-------~~~~~~~~~------  654 (751)
                      .++....   .++++++|||+||.+++.++.++|.....++ ..+..........  .       .........      
T Consensus        73 ~~~~~~~---~~~~~l~G~S~Gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (242)
T d1tqha_          73 EFLKNKG---YEKIAVAGLSLGGVFSLKLGYTVPIEGIVTM-CAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEM  148 (242)
T ss_dssp             HHHHHHT---CCCEEEEEETHHHHHHHHHHTTSCCSCEEEE-SCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             hhhhhcc---cCceEEEEcchHHHHhhhhcccCcccccccc-cccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHH
Confidence            6666543   4689999999999999999999986543332 2222111000000  0       000000000      


Q ss_pred             -----------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc
Q 004475          655 -----------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE  723 (751)
Q Consensus       655 -----------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~  723 (751)
                                 .............+..+++|+|+++|++|..+|  +..++.+++.+.  +..++++++++++|......
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~  224 (242)
T d1tqha_         149 EKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQ  224 (242)
T ss_dssp             HHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCC--CSSEEEEEETTCCSSGGGST
T ss_pred             hhhhhhccchhhcccccccccccccceeccccceeecccCCccC--HHHHHHHHHHcC--CCCcEEEEECCCCCcCcccc
Confidence                       000000111223456789999999999999999  888888887764  34689999999999877555


Q ss_pred             cHHHHHHHHHHHHHH
Q 004475          724 NVMHVIWETDRWLQK  738 (751)
Q Consensus       724 ~~~~~~~~~~~fl~~  738 (751)
                      ..+.+.+.+.+||++
T Consensus       225 ~~~~~~~~i~~Fl~~  239 (242)
T d1tqha_         225 EKDQLHEDIYAFLES  239 (242)
T ss_dssp             THHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            678899999999985


No 46 
>d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]}
Probab=99.70  E-value=3.5e-16  Score=161.72  Aligned_cols=252  Identities=15%  Similarity=0.124  Sum_probs=159.9

Q ss_pred             CceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          479 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       479 ~~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      +..+.+.++..||+++.+.+|+|++     .+++|+||+.|+.+.......   .................|+++||+|+
T Consensus        26 ~~~~~v~ipmrDG~~L~~~v~~P~~-----~~~~P~il~~tpY~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~Gy~vv   97 (385)
T d2b9va2          26 YIKREVMVPMRDGVKLYTVIVIPKN-----ARNAPILLTRTPYNAKGRANR---VPNALTMREVLPQGDDVFVEGGYIRV   97 (385)
T ss_dssp             EEEEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTCS---STTCSSHHHHSCGGGHHHHHTTCEEE
T ss_pred             CeEeEEEEECCCCCEEEEEEEEcCC-----CCceeEEEEEccCCCCCcccc---CCcccccccccchHHHHHHhCCcEEE
Confidence            4567899999999999999999976     457999999987642211100   00001111112234568899999999


Q ss_pred             EcCCCCCCCCCCCCCCc-----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 004475          559 AGPSIPIIGEGDKLPND-----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC  627 (751)
Q Consensus       559 ~~~~~~~~g~g~~~~~~-----------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~  627 (751)
                      ..+.+   |.|.+....           .......+|..++|+|+.++..++..||+++|+|+||++++.+|+..|+.++
T Consensus        98 ~~d~R---G~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~  174 (385)
T d2b9va2          98 FQDIR---GKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALK  174 (385)
T ss_dssp             EEECT---TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEE
T ss_pred             EEcCC---cccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcce
Confidence            95554   544442211           1122457999999999999976778899999999999999999999989999


Q ss_pred             EEEEccCCCCCCCCccCc--------------------------ccccccchhh--------------------------
Q 004475          628 CGIARSGSYNKTLTPFGF--------------------------QTEFRTLWEA--------------------------  655 (751)
Q Consensus       628 ~~v~~~~~~d~~~~~~~~--------------------------~~~~~~~~~~--------------------------  655 (751)
                      +++...+..+........                          .......+..                          
T Consensus       175 a~~~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  254 (385)
T d2b9va2         175 VAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMH  254 (385)
T ss_dssp             EEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHH
T ss_pred             EEEEecccccccccccccCCchhccccHHHHHhhhhhcccCccccccchHHHHHHHHhccccccchhcccchhhhhhhhc
Confidence            999988876632211000                          0000000000                          


Q ss_pred             -----HHHHHhcCcccc--cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhC--CCcEEEEEeCCCCCcCCcc----
Q 004475          656 -----TNVYIEMSPITH--ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH--GALSRLVLLPFEHHVYAAR----  722 (751)
Q Consensus       656 -----~~~~~~~~~~~~--~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~H~~~~~----  722 (751)
                           .+.+...++...  ..++.+|+|++.|..|...   ...+.+.++.++..  +.+.++++-|.. |.....    
T Consensus       255 ~~p~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~---~~g~~~~~~~l~~~~~~~~~~LiiGPw~-H~~~~~~~~~  330 (385)
T d2b9va2         255 AHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQED---MWGAIHAWQALKDADVKAPNTLVMGPWR-HSGVNYNGST  330 (385)
T ss_dssp             HCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSC---SSHHHHHHHHHHHTTCSSCEEEEEESCC-TTGGGSCCSE
T ss_pred             cCcccchhhhhcChhHHHhhccccCceEEEEecccCCc---ccchHHHHHHHHhhccCCCcEEEEeCCc-CCCccccccc
Confidence                 011222232222  2356789999999887654   35556677777654  456788888874 643111    


Q ss_pred             --------c-cHHHHHHHHHHHHHHHhcCCCC
Q 004475          723 --------E-NVMHVIWETDRWLQKYCLSNTS  745 (751)
Q Consensus       723 --------~-~~~~~~~~~~~fl~~~l~~~~~  745 (751)
                              + ........+++||+++|+....
T Consensus       331 ~g~~~~~~~~~~~~~~~~~l~WFD~~LKG~~~  362 (385)
T d2b9va2         331 LGPLEFEGDTAHQYRRDVFRPFFDEYLKPGSA  362 (385)
T ss_dssp             ETTEECSSCHHHHHHHHTHHHHHHHHHSTTCC
T ss_pred             ccccccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence                    1 1233455679999999986443


No 47 
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=99.70  E-value=7.5e-16  Score=151.72  Aligned_cols=214  Identities=14%  Similarity=0.113  Sum_probs=132.6

Q ss_pred             EEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC
Q 004475          486 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI  565 (751)
Q Consensus       486 ~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~  565 (751)
                      +++.||.++....+-        +  -|+||++||.+.           +...|    ......|+++||.|++   .+.
T Consensus         3 ~~t~dG~~l~y~~~G--------~--g~~ivlvHG~~~-----------~~~~~----~~~~~~l~~~g~~vi~---~D~   54 (274)
T d1a8qa_           3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPL-----------NGDAW----QDQLKAVVDAGYRGIA---HDR   54 (274)
T ss_dssp             EECTTSCEEEEEEEC--------S--SSEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred             EECcCCCEEEEEEEC--------C--CCeEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEE---EeC
Confidence            456688877766552        1  256899999641           11111    2345577889999999   566


Q ss_pred             CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEccCCCCCCCCc
Q 004475          566 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTP  642 (751)
Q Consensus       566 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~d~~~~~  642 (751)
                      +|+|.+...  ........+|+.++++.+      ..+++.++||||||.+++.+++ +.|+++++++++++........
T Consensus        55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~  128 (274)
T d1a8qa_          55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS  128 (274)
T ss_dssp             TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred             CCCcccccccccccchhhHHHHHHHHHHh------hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhh
Confidence            677776443  233455566666666544      2468999999999999888665 4588999999888643211100


Q ss_pred             ----cCccccc------------------------------ccchh--------------------hHHHHHhcCccccc
Q 004475          643 ----FGFQTEF------------------------------RTLWE--------------------ATNVYIEMSPITHA  668 (751)
Q Consensus       643 ----~~~~~~~------------------------------~~~~~--------------------~~~~~~~~~~~~~~  668 (751)
                          .......                              .....                    ....+...+....+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  208 (274)
T d1a8qa_         129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL  208 (274)
T ss_dssp             SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred             hhccchhhHHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHH
Confidence                0000000                              00000                    00011122223346


Q ss_pred             CCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCc-cccHHHHHHHHHHHHHH
Q 004475          669 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA-RENVMHVIWETDRWLQK  738 (751)
Q Consensus       669 ~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl~~  738 (751)
                      .++++|+|+++|++|..+|  .+...+....+   -..+++++++++||.... .+..+.+.+.+.+||++
T Consensus       209 ~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k  274 (274)
T d1a8qa_         209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK  274 (274)
T ss_dssp             TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred             HhccceeeeeccCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence            7899999999999999998  66543333222   134689999999998653 35567888889999863


No 48 
>d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.70  E-value=9.3e-16  Score=145.10  Aligned_cols=118  Identities=25%  Similarity=0.242  Sum_probs=92.7

Q ss_pred             cCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCC
Q 004475          595 RGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK  673 (751)
Q Consensus       595 ~~~id~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (751)
                      ...+|++||+++|+||||.+|+.++.. .+..+.+++++++.........    ..                 .....++
T Consensus       100 ~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~----~~-----------------~~~~~~~  158 (218)
T d1auoa_         100 RTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL----EL-----------------SASQQRI  158 (218)
T ss_dssp             HTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC----CC-----------------CHHHHTC
T ss_pred             HhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc----cc-----------------chhccCC
Confidence            345899999999999999999988764 4567999999998643211100    00                 0011257


Q ss_pred             CEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          674 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       674 P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      |+|++||+.|.+||  .+.++++++.|++.|.+++++.|+ ++|.+..     +.+..+.+||.++|+
T Consensus       159 pvl~~hG~~D~vvp--~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~-----~~~~~i~~wl~~~lg  218 (218)
T d1auoa_         159 PALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEIHDIGAWLAARLG  218 (218)
T ss_dssp             CEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHHHHHHHHHHHHHC
T ss_pred             CEEEEecCCCCccC--HHHHHHHHHHHHHCCCCEEEEEEC-CCCccCH-----HHHHHHHHHHHHhcC
Confidence            99999999999999  999999999999999999999998 5798752     567889999998874


No 49 
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=8.2e-15  Score=149.20  Aligned_cols=281  Identities=14%  Similarity=0.105  Sum_probs=172.6

Q ss_pred             CCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeee-ccCCCCccccceeeeeEEecCCcEEEEee
Q 004475           27 YPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTI  105 (751)
Q Consensus        27 ~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspDg~~l~~~~  105 (751)
                      +.....+...+|||||++||...           .+.|.++++..++... +...........+..++|||||+.|+..+
T Consensus        48 ~~H~~~V~~v~fs~~g~~latg~-----------dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~  116 (337)
T d1gxra_          48 LNHGEVVCAVTISNPTRHVYTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG  116 (337)
T ss_dssp             ECCSSCCCEEEECSSSSEEEEEC-----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred             CCCCCcEEEEEECCCCCEEEEEE-----------CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEee
Confidence            33444678899999999998732           2468888887654322 21111000112477899999999998774


Q ss_pred             cCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-C---ceecCCC-ceEEee
Q 004475          106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-T---AKDFGTP-AVYTAV  180 (751)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~---~~~lt~~-~~~~~~  180 (751)
                      .+                                                 ..|.++++.. .   ...+..+ ..+...
T Consensus       117 ~d-------------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~  147 (337)
T d1gxra_         117 EA-------------------------------------------------STLSIWDLAAPTPRIKAELTSSAPACYAL  147 (337)
T ss_dssp             SS-------------------------------------------------SEEEEEECCCC--EEEEEEECSSSCEEEE
T ss_pred             cc-------------------------------------------------ccccccccccccccccccccccccccccc
Confidence            42                                                 3566777632 2   2233334 667788


Q ss_pred             eeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEE
Q 004475          181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV  260 (751)
Q Consensus       181 ~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~  260 (751)
                      .|+||+..++....+             ..+.+|++.+++.......            ....+..++|+++|+. ++..
T Consensus       148 ~~~~~~~~l~s~~~d-------------~~i~~~~~~~~~~~~~~~~------------~~~~v~~l~~s~~~~~-~~~~  201 (337)
T d1gxra_         148 AISPDSKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQG------------HTDGASCIDISNDGTK-LWTG  201 (337)
T ss_dssp             EECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECC------------CSSCEEEEEECTTSSE-EEEE
T ss_pred             ccccccccccccccc-------------ccccccccccccccccccc------------cccccccccccccccc-cccc
Confidence            999999988765433             3578899887765433221            1123557899999998 5654


Q ss_pred             EeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCccee
Q 004475          261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV  339 (751)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~  339 (751)
                      .            ..+.+.++++.   .+...........+. +.|+|+++.|+....    ...+.+.+..++  ....
T Consensus       202 ~------------~d~~v~i~d~~---~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----d~~i~i~d~~~~--~~~~  260 (337)
T d1gxra_         202 G------------LDNTVRSWDLR---EGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----SSNVEVLHVNKP--DKYQ  260 (337)
T ss_dssp             E------------TTSEEEEEETT---TTEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSS--CEEE
T ss_pred             c------------ccccccccccc---cceeecccccccceEEEEEcccccccceecc----cccccccccccc--cccc
Confidence            3            23578888875   233323334455666 899999999886552    245666677664  2222


Q ss_pred             eeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhh
Q 004475          340 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE  419 (751)
Q Consensus       340 l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~  419 (751)
                      ... ....+..      ++|+|||+.|+..+.+                     ..|++||+.+++..........    
T Consensus       261 ~~~-~~~~i~~------v~~s~~g~~l~s~s~D---------------------g~i~iwd~~~~~~~~~~~~~~~----  308 (337)
T d1gxra_         261 LHL-HESCVLS------LKFAYCGKWFVSTGKD---------------------NLLNAWRTPYGASIFQSKESSS----  308 (337)
T ss_dssp             ECC-CSSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSSC----
T ss_pred             ccc-cccccce------EEECCCCCEEEEEeCC---------------------CeEEEEECCCCCEEEEccCCCC----
Confidence            221 1112222      7899999988877632                     3788999998876544333221    


Q ss_pred             ceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475          420 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW  458 (751)
Q Consensus       420 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~  458 (751)
                       +.       .++||||++.|+... . .  +.|.++|+
T Consensus       309 -v~-------~~~~s~d~~~l~t~s-~-D--~~I~vWdl  335 (337)
T d1gxra_         309 -VL-------SCDISVDDKYIVTGS-G-D--KKATVYEV  335 (337)
T ss_dssp             -EE-------EEEECTTSCEEEEEE-T-T--SCEEEEEE
T ss_pred             -EE-------EEEEeCCCCEEEEEe-C-C--CeEEEEEE
Confidence             22       258999998776532 2 1  34555553


No 50 
>d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Probab=99.69  E-value=5.5e-16  Score=153.66  Aligned_cols=199  Identities=13%  Similarity=0.050  Sum_probs=130.0

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA  588 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~  588 (751)
                      -|+||++||.|..+           ..|.... .....++++||.|++   ++.+|+|.+...   ........+|+.++
T Consensus        30 G~~ivllHG~~~~~-----------~~~~~~~-~~l~~~~~~g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~i~~l   94 (283)
T d2rhwa1          30 GETVIMLHGGGPGA-----------GGWSNYY-RNVGPFVDAGYRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKGL   94 (283)
T ss_dssp             SSEEEEECCCSTTC-----------CHHHHHT-TTHHHHHHTTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCCh-----------hHHHHHH-HHHHHHHHCCCEEEE---EeCCCCcccccccccccccchhhhhcccc
Confidence            37899999964211           1121111 223456789999999   566778776432   22333445666666


Q ss_pred             HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC--CccCccc---------c---------
Q 004475          589 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--TPFGFQT---------E---------  648 (751)
Q Consensus       589 v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~--~~~~~~~---------~---------  648 (751)
                      ++.+      +.+++.++||||||.+|+.++.++|++++++|++++..-...  .......         .         
T Consensus        95 i~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (283)
T d2rhwa1          95 MDAL------DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQM  168 (283)
T ss_dssp             HHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred             cccc------cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHH
Confidence            6654      236899999999999999999999999999999886422110  0000000         0         


Q ss_pred             -------ccc--------chh----hHHH------------HHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH
Q 004475          649 -------FRT--------LWE----ATNV------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF  697 (751)
Q Consensus       649 -------~~~--------~~~----~~~~------------~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~  697 (751)
                             ...        .+.    ....            ....+....+.++++|+|+++|++|..+|  +..++.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~  246 (283)
T d2rhwa1         169 LQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLL  246 (283)
T ss_dssp             HHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred             HHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcC--HHHHHHHH
Confidence                   000        000    0000            01112334566789999999999999998  88888887


Q ss_pred             HHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          698 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                      +.+    ..+++++++++||... .+..+++.+.+.+||++
T Consensus       247 ~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~FLk~  282 (283)
T d2rhwa1         247 WNI----DDARLHVFSKCGHWAQ-WEHADEFNRLVIDFLRH  282 (283)
T ss_dssp             HHS----SSEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred             HhC----CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHhC
Confidence            765    3578999999999765 56678889999999975


No 51 
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}
Probab=99.68  E-value=4.4e-16  Score=152.91  Aligned_cols=213  Identities=15%  Similarity=0.129  Sum_probs=133.6

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475          488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG  567 (751)
Q Consensus       488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g  567 (751)
                      ..+|.++.....   +     +  -|.||++||.|..           ...+..|. ... ..+++||.|++   ++.+|
T Consensus         8 ~~dg~~l~y~~~---G-----~--g~~vvllHG~~~~-----------~~~~~~~~-~~~-~~l~~~~~v~~---~D~~G   61 (268)
T d1j1ia_           8 NAGGVETRYLEA---G-----K--GQPVILIHGGGAG-----------AESEGNWR-NVI-PILARHYRVIA---MDMLG   61 (268)
T ss_dssp             EETTEEEEEEEE---C-----C--SSEEEEECCCSTT-----------CCHHHHHT-TTH-HHHTTTSEEEE---ECCTT
T ss_pred             EECCEEEEEEEE---c-----C--CCeEEEECCCCCC-----------ccHHHHHH-HHH-HHHhcCCEEEE---Ecccc
Confidence            357877765432   2     1  2568899996411           11111111 122 33467999999   56667


Q ss_pred             CCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc---
Q 004475          568 EGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---  642 (751)
Q Consensus       568 ~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~---  642 (751)
                      +|.+..  .........+|+.+.++.+   . + ..++.++|||+||.+++.+|.++|++++++|++++........   
T Consensus        62 ~G~S~~~~~~~~~~~~~~~~~~~i~~l---~-~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~  136 (268)
T d1j1ia_          62 FGKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL  136 (268)
T ss_dssp             STTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----
T ss_pred             cccccCCccccccccccccchhhHHHh---h-h-cccceeeeccccccccchhhccChHhhheeeecCCCccccccchhh
Confidence            777643  2233455566665555443   2 2 2579999999999999999999999999999988742211000   


Q ss_pred             -----cCcccc------------c-ccc-------hh-------------hHHHHHh----cCcccccCCCCCCEEEEEc
Q 004475          643 -----FGFQTE------------F-RTL-------WE-------------ATNVYIE----MSPITHANKIKKPILIIHG  680 (751)
Q Consensus       643 -----~~~~~~------------~-~~~-------~~-------------~~~~~~~----~~~~~~~~~~~~P~li~~G  680 (751)
                           ......            . ...       +.             ....+..    ......+.++++|+|+++|
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G  216 (268)
T d1j1ia_         137 RPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQG  216 (268)
T ss_dssp             -----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEE
T ss_pred             hhhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEe
Confidence                 000000            0 000       00             0000000    1112346788999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          681 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       681 ~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                      ++|..+|  +..+..+.+.+    ..+++++++++||... .+..+++.+.+.+||.+
T Consensus       217 ~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~FL~~  267 (268)
T d1j1ia_         217 KDDKVVP--VETAYKFLDLI----DDSWGYIIPHCGHWAM-IEHPEDFANATLSFLSL  267 (268)
T ss_dssp             TTCSSSC--HHHHHHHHHHC----TTEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHH
T ss_pred             CCCCCCC--HHHHHHHHHhC----CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHcC
Confidence            9999998  88877777665    3578999999999875 56778899999999975


No 52 
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.68  E-value=2e-14  Score=144.22  Aligned_cols=250  Identities=9%  Similarity=0.028  Sum_probs=154.7

Q ss_pred             ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475           33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP  112 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~  112 (751)
                      ....+++|||+.|||..           +..++++++++++...+..+...    .+..++|||||++|+..+.+     
T Consensus        20 ~~~~a~~~~g~~l~~~~-----------~~~v~i~~~~~~~~~~~~~~H~~----~v~~~~~sp~g~~latg~~d-----   79 (311)
T d1nr0a1          20 AVVLGNTPAGDKIQYCN-----------GTSVYTVPVGSLTDTEIYTEHSH----QTTVAKTSPSGYYCASGDVH-----   79 (311)
T ss_dssp             CCCCEECTTSSEEEEEE-----------TTEEEEEETTCSSCCEEECCCSS----CEEEEEECTTSSEEEEEETT-----
T ss_pred             eEEEEEcCCCCEEEEEe-----------CCEEEEEECCCCceeEEEcCCCC----CEEEEEEeCCCCeEeccccC-----
Confidence            45678999999999953           35689999988776554333221    47889999999999877443     


Q ss_pred             CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-c--eecCCC-ceEEeeeeCCCCc
Q 004475          113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-A--KDFGTP-AVYTAVEPSPDQK  187 (751)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~--~~lt~~-~~~~~~~~SpDG~  187 (751)
                                                                  ..|.++++ +++ .  ..+..+ ..+..++|+|||+
T Consensus        80 --------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~  115 (311)
T d1nr0a1          80 --------------------------------------------GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK  115 (311)
T ss_dssp             --------------------------------------------SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             --------------------------------------------ceEeeeeeeccccccccccccccCcccccccccccc
Confidence                                                        46777777 332 2  223333 6788999999999


Q ss_pred             eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475          188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD  267 (751)
Q Consensus       188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~  267 (751)
                      +|+......           ...+.+|+.++++....            +......+..+.|+|+|+.+++..+      
T Consensus       116 ~l~~~~~~~-----------~~~~~v~~~~~~~~~~~------------l~~h~~~v~~v~~~~~~~~~l~sgs------  166 (311)
T d1nr0a1         116 RIAAVGEGR-----------ERFGHVFLFDTGTSNGN------------LTGQARAMNSVDFKPSRPFRIISGS------  166 (311)
T ss_dssp             EEEEEECCS-----------SCSEEEEETTTCCBCBC------------CCCCSSCEEEEEECSSSSCEEEEEE------
T ss_pred             ccccccccc-----------ccccccccccccccccc------------ccccccccccccccccceeeecccc------
Confidence            998875432           22356778776543211            1112234668899999998444332      


Q ss_pred             CccccCcccceeeccCCCCCCCC-ceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeeccc
Q 004475          268 ANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF  345 (751)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  345 (751)
                            ..+.|.++++.   ... ...+......+. +.|+||++.|+....    ...+.+.+...+  ..........
T Consensus       167 ------~d~~i~i~d~~---~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~----d~~v~~~d~~~~--~~~~~~~~~~  231 (311)
T d1nr0a1         167 ------DDNTVAIFEGP---PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG----DGTIVLYNGVDG--TKTGVFEDDS  231 (311)
T ss_dssp             ------TTSCEEEEETT---TBEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTC--CEEEECBCTT
T ss_pred             ------ccccccccccc---ccccccccccccccccccccCccccccccccc----cccccccccccc--cccccccccc
Confidence                  23568888875   222 222233355566 899999998887552    234555666553  1122211111


Q ss_pred             ccccCCC-CCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475          346 ENVYSDP-GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE  411 (751)
Q Consensus       346 ~~~~~~~-~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~  411 (751)
                      .....+. ....++|+|||++|+..+.+                     ..|++||+.+++..+.+.
T Consensus       232 ~~~~~h~~~V~~~~~s~~~~~l~tgs~D---------------------g~v~iwd~~t~~~~~~l~  277 (311)
T d1nr0a1         232 LKNVAHSGSVFGLTWSPDGTKIASASAD---------------------KTIKIWNVATLKVEKTIP  277 (311)
T ss_dssp             SSSCSSSSCEEEEEECTTSSEEEEEETT---------------------SEEEEEETTTTEEEEEEE
T ss_pred             cccccccccccccccCCCCCEEEEEeCC---------------------CeEEEEECCCCcEEEEEE
Confidence            0000000 01127899999999887632                     268999999988755444


No 53 
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.67  E-value=1.6e-16  Score=148.87  Aligned_cols=110  Identities=22%  Similarity=0.209  Sum_probs=92.5

Q ss_pred             CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEE
Q 004475          598 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI  677 (751)
Q Consensus       598 id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li  677 (751)
                      ++.++|+++|+|+||.+++.++..+|+.+.+++++++.......                        .......+|+++
T Consensus        93 ~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~i  148 (203)
T d2r8ba1          93 YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK------------------------ISPAKPTRRVLI  148 (203)
T ss_dssp             HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC------------------------CCCCCTTCEEEE
T ss_pred             CCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc------------------------cccccccchhhc
Confidence            57889999999999999999999999999999999996532111                        011234689999


Q ss_pred             EEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          678 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       678 ~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      +||++|++||  +.++++++++|++.|.+++++++++ +|.+..     +.++.+.+||.++
T Consensus       149 ~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~-----~~~~~~~~wl~~~  202 (203)
T d2r8ba1         149 TAGERDPICP--VQLTKALEESLKAQGGTVETVWHPG-GHEIRS-----GEIDAVRGFLAAY  202 (203)
T ss_dssp             EEETTCTTSC--HHHHHHHHHHHHHHSSEEEEEEESS-CSSCCH-----HHHHHHHHHHGGG
T ss_pred             cccCCCCccc--HHHHHHHHHHHHHCCCCEEEEEECC-CCcCCH-----HHHHHHHHHHHhc
Confidence            9999999999  9999999999999999999999987 699752     5577889999865


No 54 
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=6.9e-16  Score=156.08  Aligned_cols=214  Identities=14%  Similarity=0.109  Sum_probs=136.8

Q ss_pred             EcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCC
Q 004475          487 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII  566 (751)
Q Consensus       487 ~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~  566 (751)
                      ...+|.+|+...+   +     +  .|+||++||.+..           ...|    ......|+++||.|++   .+.+
T Consensus        17 ~~~~g~~i~y~~~---G-----~--gp~vlllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~---~D~~   68 (322)
T d1zd3a2          17 TVKPRVRLHFVEL---G-----S--GPAVCLCHGFPES-----------WYSW----RYQIPALAQAGYRVLA---MDMK   68 (322)
T ss_dssp             EEETTEEEEEEEE---C-----C--SSEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE---EECT
T ss_pred             EECCCCEEEEEEE---c-----C--CCeEEEECCCCCC-----------HHHH----HHHHHHHHHCCCEEEE---eccc
Confidence            3447877776654   1     1  3789999996421           1112    2456678899999999   6667


Q ss_pred             CCCCCCCCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc
Q 004475          567 GEGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP  642 (751)
Q Consensus       567 g~g~~~~~~~----~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~  642 (751)
                      |+|.+.....    ......+++.+.++.+      +.+++.++||||||.+++.+|.++|++++++|++++........
T Consensus        69 G~G~S~~~~~~~~~~~~~~~~~i~~l~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~  142 (322)
T d1zd3a2          69 GYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPN  142 (322)
T ss_dssp             TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSS
T ss_pred             cccccccccccccccccccchhhhhhhhcc------cccccccccccchHHHHHHHHHhCCccccceEEEcccccccccc
Confidence            8887654321    2344455555555544      34689999999999999999999999999999887532110000


Q ss_pred             cC----------------------------------------------ccc---------------ccc-cch---hhHH
Q 004475          643 FG----------------------------------------------FQT---------------EFR-TLW---EATN  657 (751)
Q Consensus       643 ~~----------------------------------------------~~~---------------~~~-~~~---~~~~  657 (751)
                      ..                                              ...               ... ..+   ....
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T d1zd3a2         143 MSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ  222 (322)
T ss_dssp             SCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHH
T ss_pred             cchhhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHH
Confidence            00                                              000               000 000   0000


Q ss_pred             ----HH------------------HhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475          658 ----VY------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE  715 (751)
Q Consensus       658 ----~~------------------~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~  715 (751)
                          .+                  ..........++++|+|+++|++|..++  +...+.+.+.+    ...++++++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~----~~~~~~~i~~~  296 (322)
T d1zd3a2         223 FYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWI----PHLKRGHIEDC  296 (322)
T ss_dssp             HHHHHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTC----TTCEEEEETTC
T ss_pred             HHHHHHhhcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCC--HHHHHHHHHhC----CCCEEEEECCC
Confidence                00                  0111122346789999999999999998  77655554333    45689999999


Q ss_pred             CCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          716 HHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       716 ~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      ||... .+..+++.+.+.+||+++-.
T Consensus       297 gH~~~-~e~p~~v~~~i~~FL~~~~~  321 (322)
T d1zd3a2         297 GHWTQ-MDKPTEVNQILIKWLDSDAR  321 (322)
T ss_dssp             CSCHH-HHSHHHHHHHHHHHHHHHTC
T ss_pred             CCchH-HhCHHHHHHHHHHHHhhcCC
Confidence            99875 56678899999999998753


No 55 
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.66  E-value=1.3e-15  Score=147.95  Aligned_cols=200  Identities=11%  Similarity=0.019  Sum_probs=128.6

Q ss_pred             cEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 004475          513 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV  592 (751)
Q Consensus       513 P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l  592 (751)
                      |.||++||.+.           +...|.    .+...|+++||.|++   ++.+|+|.+...........+........+
T Consensus         3 ~~vvllHG~~~-----------~~~~w~----~~~~~L~~~g~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~   64 (258)
T d1xkla_           3 KHFVLVHGACH-----------GGWSWY----KLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMELM   64 (258)
T ss_dssp             CEEEEECCTTC-----------CGGGGT----THHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHHH
T ss_pred             CcEEEECCCCC-----------CHHHHH----HHHHHHHhCCCEEEE---ecCCCCCCCCCCCCCCcchHHHHHHHhhhh
Confidence            57899999641           112222    456688889999999   677788887543222111122222333333


Q ss_pred             HHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC------------------------cccc
Q 004475          593 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG------------------------FQTE  648 (751)
Q Consensus       593 ~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~------------------------~~~~  648 (751)
                      ....  ...++.++|||+||.+++.++.++|++++.+|++++..........                        ....
T Consensus        65 ~~~~--~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (258)
T d1xkla_          65 ESLS--ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEE  142 (258)
T ss_dssp             HTSC--SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTS
T ss_pred             hccc--ccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhh
Confidence            3322  2357999999999999999999999999999998875331111000                        0000


Q ss_pred             cccch-----------------hh--------------HHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHH
Q 004475          649 FRTLW-----------------EA--------------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF  697 (751)
Q Consensus       649 ~~~~~-----------------~~--------------~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~  697 (751)
                      ....+                 ..              ...............+++|+++++|++|..+|  +...+.+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~  220 (258)
T d1xkla_         143 PLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQRWQI  220 (258)
T ss_dssp             CCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHHHHHH
T ss_pred             hcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCC--HHHHHHHH
Confidence            00000                 00              00111112233445677999999999999998  88888887


Q ss_pred             HHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          698 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      +.+.    .+++++++++||..+ .+..+++.+.+.+|++++
T Consensus       221 ~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~e~~~k~  257 (258)
T d1xkla_         221 DNIG----VTEAIEIKGADHMAM-LCEPQKLCASLLEIAHKY  257 (258)
T ss_dssp             HHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred             HHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHHhc
Confidence            7764    458999999999865 567888999999998875


No 56 
>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.66  E-value=4.2e-16  Score=153.38  Aligned_cols=211  Identities=11%  Similarity=0.037  Sum_probs=132.0

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|..++...+-        +  -|.||++||.|...           ..+..|. ... ..+++||.|++   ++.+|+
T Consensus        10 ~~G~~~~Y~~~G--------~--G~pvvllHG~~~~~-----------~~~~~~~-~~~-~~l~~~~~vi~---~Dl~G~   63 (271)
T d1uk8a_          10 AAGVLTNYHDVG--------E--GQPVILIHGSGPGV-----------SAYANWR-LTI-PALSKFYRVIA---PDMVGF   63 (271)
T ss_dssp             ETTEEEEEEEEC--------C--SSEEEEECCCSTTC-----------CHHHHHT-TTH-HHHTTTSEEEE---ECCTTS
T ss_pred             ECCEEEEEEEEe--------e--CCeEEEECCCCCCc-----------cHHHHHH-HHH-HHHhCCCEEEE---EeCCCC
Confidence            477777765441        1  25788999964211           1121111 112 22457999999   666788


Q ss_pred             CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC-
Q 004475          569 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-  644 (751)
Q Consensus       569 g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-  644 (751)
                      |.+....   ...+...+++    ..+.+.-  +.+++.++||||||.+|+.++.++|++++++|+..+.......... 
T Consensus        64 G~S~~~~~~~~~~~~~~~~~----~~~~~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~  137 (271)
T d1uk8a_          64 GFTDRPENYNYSKDSWVDHI----IGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL  137 (271)
T ss_dssp             TTSCCCTTCCCCHHHHHHHH----HHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHH
T ss_pred             CCccccccccccccccchhh----hhhhhhh--cCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhh
Confidence            8764322   1233334433    3333332  3468999999999999999999999999999988775331111000 


Q ss_pred             -----cccc---------------cccchh-------------hHHHH-------------HhcCcccccCCCCCCEEEE
Q 004475          645 -----FQTE---------------FRTLWE-------------ATNVY-------------IEMSPITHANKIKKPILII  678 (751)
Q Consensus       645 -----~~~~---------------~~~~~~-------------~~~~~-------------~~~~~~~~~~~~~~P~li~  678 (751)
                           ....               ......             ..+.+             ........+.++++|+|++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii  217 (271)
T d1uk8a_         138 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLII  217 (271)
T ss_dssp             HHHHTCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred             hhhhhccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEE
Confidence                 0000               000000             00000             0111223467889999999


Q ss_pred             EcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          679 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       679 ~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                      +|++|..+|  +..+..+.+.+.    .+++++++++||... .+..+++.+.+.+||++
T Consensus       218 ~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~e  270 (271)
T d1uk8a_         218 HGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNE  270 (271)
T ss_dssp             EETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHT
T ss_pred             ecCCCCCcC--HHHHHHHHHhCC----CCEEEEECCCCCchH-HHCHHHHHHHHHHHHhc
Confidence            999999998  888877776653    468999999999865 56778899999999975


No 57 
>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]}
Probab=99.66  E-value=1.4e-16  Score=156.25  Aligned_cols=206  Identities=12%  Similarity=0.033  Sum_probs=137.4

Q ss_pred             ceEEEEEEcCCCc-eEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          480 QKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       480 ~~e~i~~~~~~~~-~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      ..+.+.+.+.++. ++.+++++|+++++.+  ++|+|+++||+++..        .    .  ......+..+.+|+.|+
T Consensus        12 ~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~--~yPvi~~lhG~~~~~--------~----~--~~~~~~~~~~~~~~~vV   75 (265)
T d2gzsa1          12 HFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAVMD--------R----L--DDELLKQLSEKTPPVIV   75 (265)
T ss_dssp             EEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHHHHH--------H----C--CHHHHHHHTTSCCCEEE
T ss_pred             eeEEEEEEcCCCCEEEEEEEEcCCCCCCCC--CceEEEEecCcchhh--------h----H--HHHHHHHHHhcCCCeEE
Confidence            4678889988875 7999999999987654  599999999963211        0    0  00112233346789888


Q ss_pred             EcCCCCCCCCCCC----------------------CCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 004475          559 AGPSIPIIGEGDK----------------------LPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT  615 (751)
Q Consensus       559 ~~~~~~~~g~g~~----------------------~~~-~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a  615 (751)
                      .+.+....+.+..                      ... ............+++.++.++..+|+.+++|+|+|+||+++
T Consensus        76 ~v~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a  155 (265)
T d2gzsa1          76 AVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFV  155 (265)
T ss_dssp             EEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHH
T ss_pred             EecCCCCCcCcccccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHH
Confidence            7443322221100                      000 00001111233456677777777899999999999999999


Q ss_pred             HHHHHhCCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCC--------CCCCC
Q 004475          616 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEV--------DDKVG  687 (751)
Q Consensus       616 ~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~--------D~~vp  687 (751)
                      +.++.+. +.+.++++.+|...+               .....+...++.........|+++.+|+.        |..++
T Consensus       156 ~~~~~~~-~~f~~~~a~s~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~  219 (265)
T d2gzsa1         156 LDSWLSS-SYFRSYYSASPSLGR---------------GYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGV  219 (265)
T ss_dssp             HHHHHHC-SSCSEEEEESGGGST---------------THHHHHHHHHTSCTTTTTTCEEEEEECCC-----------CH
T ss_pred             HHHHHcC-cccCEEEEECCcccc---------------cchhhhhccccccccccCCCcEEEEcCCcccccccccccchh
Confidence            9987765 677888888885421               22233333344445556678899999977        56667


Q ss_pred             CChHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 004475          688 LFPMQAERFFDALKGHGALSRLVLLPFEHHVY  719 (751)
Q Consensus       688 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~  719 (751)
                        ..++++++++|+++|+++++.+|||++|+.
T Consensus       220 --~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~  249 (265)
T d2gzsa1         220 --LSKIHTTLTILKDKGVNAVFWDFPNLGHGP  249 (265)
T ss_dssp             --HHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred             --HHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence              889999999999999999999999999974


No 58 
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.66  E-value=4.6e-15  Score=145.81  Aligned_cols=213  Identities=15%  Similarity=0.099  Sum_probs=134.7

Q ss_pred             EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC
Q 004475          485 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP  564 (751)
Q Consensus       485 ~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~  564 (751)
                      +|.+.||.++....+-        +  .|.||++||.+.           ....|    ......|+++||.|++   .+
T Consensus         2 ~f~~~dG~~i~y~~~G--------~--g~pvvllHG~~~-----------~~~~~----~~~~~~l~~~~~~vi~---~D   53 (273)
T d1a8sa_           2 TFTTRDGTQIYYKDWG--------S--GQPIVFSHGWPL-----------NADSW----ESQMIFLAAQGYRVIA---HD   53 (273)
T ss_dssp             EEECTTSCEEEEEEES--------C--SSEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---EC
T ss_pred             EEEeeCCcEEEEEEEC--------C--CCeEEEECCCCC-----------CHHHH----HHHHHHHHhCCCEEEE---Ee
Confidence            5677899888776552        1  356889999641           11111    2445678889999999   56


Q ss_pred             CCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH-HHhCCCceeEEEEccCCCCCCCC
Q 004475          565 IIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL-LAHAPHLFCCGIARSGSYNKTLT  641 (751)
Q Consensus       565 ~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~-a~~~p~~~~~~v~~~~~~d~~~~  641 (751)
                      .+|+|.+....  .......+|+.++++.+      +..+..++|||+||.+++.+ +.++|+++++++++++.......
T Consensus        54 ~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~  127 (273)
T d1a8sa_          54 RRGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLK  127 (273)
T ss_dssp             CTTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBC
T ss_pred             chhcCccccccccccccchHHHHHHHHHhc------CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccc
Confidence            66777764432  23455566666665543      34578899999988655554 55678999998888764321110


Q ss_pred             cc----Cccc-------------------------------ccccchh--------------------hHHHHHhcCccc
Q 004475          642 PF----GFQT-------------------------------EFRTLWE--------------------ATNVYIEMSPIT  666 (751)
Q Consensus       642 ~~----~~~~-------------------------------~~~~~~~--------------------~~~~~~~~~~~~  666 (751)
                      ..    ....                               .....+.                    ....+.......
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (273)
T d1a8sa_         128 TEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTE  207 (273)
T ss_dssp             CSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHH
T ss_pred             cccccccchhhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhH
Confidence            00    0000                               0000000                    000112223334


Q ss_pred             ccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          667 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       667 ~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      .+.++++|+|+++|++|..+|  ...+..+.+.+.   ..++++++|+++|... .+..+++.+.+++||+
T Consensus       208 ~~~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~  272 (273)
T d1a8sa_         208 DLKKIDVPTLVVHGDADQVVP--IEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK  272 (273)
T ss_dssp             HHHTCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred             HHHhhccceEEEecCCCCCCC--HHHHHHHHHHhC---CCCEEEEECCCCCchH-HhCHHHHHHHHHHHcC
Confidence            567889999999999999998  676666665542   3468999999999875 5677888999999986


No 59 
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=99.66  E-value=6.1e-15  Score=145.25  Aligned_cols=197  Identities=15%  Similarity=0.065  Sum_probs=123.6

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV  589 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v  589 (751)
                      -|+||++||.+..           ...|    ......|+++||.|++   .+.+|+|.+...  ........+|+.+++
T Consensus        23 G~~ivllHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~~l   84 (277)
T d1brta_          23 GQPVVLIHGFPLS-----------GHSW----ERQSAALLDAGYRVIT---YDRRGFGQSSQPTTGYDYDTFAADLNTVL   84 (277)
T ss_dssp             SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEE---EeCCCCCcccccccccchhhhhhhhhhhh
Confidence            3678999996411           1111    2345577889999999   556677776432  223566777777777


Q ss_pred             HHHHHcCCCCCCcEEEEEeChHH-HHHHHHHHhCCCceeEEEEccCCCCCCCCccCccc-----cc-----------cc-
Q 004475          590 EEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT-----EF-----------RT-  651 (751)
Q Consensus       590 ~~l~~~~~id~~~i~l~G~S~GG-~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~-----~~-----------~~-  651 (751)
                      +.+      +.+++.++|||||| .++..++.++|++++++|++++.............     ..           .. 
T Consensus        85 ~~l------~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (277)
T d1brta_          85 ETL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYA  158 (277)
T ss_dssp             HHH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHH
T ss_pred             hcc------CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchh
Confidence            666      23589999999997 45556677889999999998865321111000000     00           00 


Q ss_pred             -------ch------------hh-H-HH------------HH-----hcCcccccCCCCCCEEEEEcCCCCCCCCChHHH
Q 004475          652 -------LW------------EA-T-NV------------YI-----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA  693 (751)
Q Consensus       652 -------~~------------~~-~-~~------------~~-----~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~  693 (751)
                             .+            .. . ..            +.     .......+.++++|+++++|++|..++  ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~  236 (277)
T d1brta_         159 FYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP--IENT  236 (277)
T ss_dssp             HHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC--GGGT
T ss_pred             hhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcC--HHHH
Confidence                   00            00 0 00            00     001122356678999999999999998  6654


Q ss_pred             HHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          694 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       694 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                      .+.....   ...++++++++++|... .+..+.+.+.+.+||++
T Consensus       237 ~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fL~k  277 (277)
T d1brta_         237 ARVFHKA---LPSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAK  277 (277)
T ss_dssp             HHHHHHH---CTTSEEEEETTCCTTHH-HHTHHHHHHHHHHHHHC
T ss_pred             HHHHHHh---CCCCEEEEECCCCCchH-HhCHHHHHHHHHHHHCc
Confidence            4433322   23568999999999875 56778889999999973


No 60 
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}
Probab=99.65  E-value=9.4e-16  Score=154.53  Aligned_cols=122  Identities=13%  Similarity=0.031  Sum_probs=84.0

Q ss_pred             EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475          482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP  561 (751)
Q Consensus       482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~  561 (751)
                      ++-.+...+|.++....+-.++        .|.||++||++..           ...+     .....++..+|.|++  
T Consensus        12 ~~~~i~~~dg~~i~y~~~G~~~--------g~pvvllHG~~g~-----------~~~~-----~~~~~~l~~~~~Vi~--   65 (313)
T d1azwa_          12 QQGSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGG-----------GCND-----KMRRFHDPAKYRIVL--   65 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTT-----------CCCG-----GGGGGSCTTTEEEEE--
T ss_pred             CCCEEEeCCCcEEEEEEecCCC--------CCEEEEECCCCCC-----------ccch-----HHHhHHhhcCCEEEE--
Confidence            5555556688888888775433        3668889996411           0111     112233568999999  


Q ss_pred             CCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475          562 SIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY  636 (751)
Q Consensus       562 ~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~  636 (751)
                       .+.+|+|.+....    ....+..+|+..+++.+      ..+++.|+||||||.+++.+|.++|++++++++.++..
T Consensus        66 -~D~rG~G~S~~~~~~~~~~~~~~~~dl~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~  137 (313)
T d1azwa_          66 -FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL  137 (313)
T ss_dssp             -ECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred             -EeccccCCCCccccccchhHHHHHHHHHHHHHhh------ccccceeEEecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence             6667888775321    12455566666666654      24689999999999999999999999999999888753


No 61 
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.65  E-value=4.8e-15  Score=145.38  Aligned_cols=213  Identities=14%  Similarity=0.109  Sum_probs=135.0

Q ss_pred             EEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC
Q 004475          485 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP  564 (751)
Q Consensus       485 ~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~  564 (751)
                      +|...||.++....+-        +  .|+||++||.+..           ...|    ......|+++||.|++   ++
T Consensus         2 ~f~~~dG~~l~y~~~G--------~--g~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~---~D   53 (271)
T d1va4a_           2 TFVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLD-----------ADMW----EYQMEYLSSRGYRTIA---FD   53 (271)
T ss_dssp             EEECTTSCEEEEEEES--------S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHTTTCEEEE---EC
T ss_pred             EEEeECCeEEEEEEEc--------C--CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEE---Ee
Confidence            4566788888765441        1  3568899996411           1111    2345577889999999   56


Q ss_pred             CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH-HHHhCCCceeEEEEccCCCCCCCC
Q 004475          565 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH-LLAHAPHLFCCGIARSGSYNKTLT  641 (751)
Q Consensus       565 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~-~a~~~p~~~~~~v~~~~~~d~~~~  641 (751)
                      .+|+|.+...  ....+...+|+.++++.+      +.+++.++|||+||.+++. ++.++|+++.++++..+.......
T Consensus        54 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~  127 (271)
T d1va4a_          54 RRGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ  127 (271)
T ss_dssp             CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBC
T ss_pred             ccccccccccccccccccccccceeeeeec------CCCcceeeccccccccccccccccccceeeEEEeeccccccccc
Confidence            6677776432  223455566666655554      3468999999998876655 566789999999988875432111


Q ss_pred             ccCccccc---------------------------------ccchh--------------------hHHHHHhcCccccc
Q 004475          642 PFGFQTEF---------------------------------RTLWE--------------------ATNVYIEMSPITHA  668 (751)
Q Consensus       642 ~~~~~~~~---------------------------------~~~~~--------------------~~~~~~~~~~~~~~  668 (751)
                      ........                                 .....                    ....+........+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  207 (271)
T d1va4a_         128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM  207 (271)
T ss_dssp             BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH
T ss_pred             chhhhhhhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhh
Confidence            10000000                                 00000                    00011112223345


Q ss_pred             CCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          669 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       669 ~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      .++++|+|+++|++|..+|  +..+.++.+.+.   ..++++++|++||... .+..+.+.+.+.+||+
T Consensus       208 ~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fL~  270 (271)
T d1va4a_         208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELI---KGAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK  270 (271)
T ss_dssp             HHCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred             hhcccceeecccCCCCCCC--HHHHHHHHHHhC---CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHC
Confidence            6789999999999999998  777777765542   2468999999999865 4567888899999986


No 62 
>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}
Probab=99.64  E-value=1e-15  Score=141.16  Aligned_cols=179  Identities=11%  Similarity=-0.076  Sum_probs=111.5

Q ss_pred             EEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 004475          514 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV  593 (751)
Q Consensus       514 ~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~  593 (751)
                      .||++||.+           ++  ....|...+...|+++||.|++++.   +|+|...         .++..+.++.+.
T Consensus         3 ~V~~vHG~~-----------~~--~~~~~~~~l~~~L~~~G~~v~~~d~---p~~~~~~---------~~~~~~~l~~~~   57 (186)
T d1uxoa_           3 QVYIIHGYR-----------AS--STNHWFPWLKKRLLADGVQADILNM---PNPLQPR---------LEDWLDTLSLYQ   57 (186)
T ss_dssp             EEEEECCTT-----------CC--TTSTTHHHHHHHHHHTTCEEEEECC---SCTTSCC---------HHHHHHHHHTTG
T ss_pred             EEEEECCCC-----------CC--cchhHHHHHHHHHHhCCCEEEEecc---CCCCcch---------HHHHHHHHHHHH
Confidence            499999953           11  1222334567788999999999544   4554421         222223333332


Q ss_pred             HcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc--eeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCC
Q 004475          594 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL--FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI  671 (751)
Q Consensus       594 ~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~--~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (751)
                      .   ....+++++||||||.+++.++.++|+.  +.++++.++..............          .....+.....++
T Consensus        58 ~---~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~  124 (186)
T d1uxoa_          58 H---TLHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEF----------TQGSFDHQKIIES  124 (186)
T ss_dssp             G---GCCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGG----------TCSCCCHHHHHHH
T ss_pred             h---ccCCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhhhhhh----------hcccccccccccC
Confidence            2   3457899999999999999999999864  34444555543221111000000          0000111112234


Q ss_pred             CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc--ccHHHHHHHHHHHHH
Q 004475          672 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR--ENVMHVIWETDRWLQ  737 (751)
Q Consensus       672 ~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~  737 (751)
                      .+|+|++||++|.+||  +.+++++++.+     +++++++++++|.....  ....+..+.+.+||.
T Consensus       125 ~~p~lvi~g~~D~~vp--~~~~~~l~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~  185 (186)
T d1uxoa_         125 AKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS  185 (186)
T ss_dssp             EEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCC--HHHHHHHHHHc-----CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHc
Confidence            6899999999999999  99999988776     24799999999965422  234567778888875


No 63 
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]}
Probab=99.64  E-value=6.3e-16  Score=155.57  Aligned_cols=213  Identities=13%  Similarity=0.036  Sum_probs=135.7

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|.++...-+-+.+       ..|+||++||.+..           ...|    ......|+++||.|++   .+.+|+
T Consensus        31 ~~g~~~~y~~~G~~~-------~~p~llllHG~~~~-----------~~~~----~~~~~~l~~~~~~vi~---~Dl~G~   85 (310)
T d1b6ga_          31 YPGLRAHYLDEGNSD-------AEDVFLCLHGEPTW-----------SYLY----RKMIPVFAESGARVIA---PDFFGF   85 (310)
T ss_dssp             CTTCEEEEEEEECTT-------CSCEEEECCCTTCC-----------GGGG----TTTHHHHHHTTCEEEE---ECCTTS
T ss_pred             CCCEEEEEEEecCCC-------CCCEEEEECCCCCc-----------hHHH----HHHHHHhhccCceEEE---eeecCc
Confidence            467777766554432       25899999996421           1112    2345678889999999   677788


Q ss_pred             CCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccC
Q 004475          569 GDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG  644 (751)
Q Consensus       569 g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~  644 (751)
                      |.+....    .......+|+.++++.+      +.+++.++||||||.+|+.+|.++|++++++|++++..........
T Consensus        86 G~S~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~  159 (310)
T d1b6ga_          86 GKSDKPVDEEDYTFEFHRNFLLALIERL------DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQP  159 (310)
T ss_dssp             TTSCEESCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCT
T ss_pred             cccccccccccccccccccchhhhhhhc------cccccccccceecccccccchhhhccccceEEEEcCccCCCcccch
Confidence            8875321    13455666666666654      2468999999999999999999999999999998765321100000


Q ss_pred             ----ccc----------------c-c--c------cch---hhHHHHHh--------------------cC---------
Q 004475          645 ----FQT----------------E-F--R------TLW---EATNVYIE--------------------MS---------  663 (751)
Q Consensus       645 ----~~~----------------~-~--~------~~~---~~~~~~~~--------------------~~---------  663 (751)
                          +..                . .  .      ...   .....+..                    ..         
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (310)
T d1b6ga_         160 AFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTE  239 (310)
T ss_dssp             HHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred             hHHHHhhcchhhhhhhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhh
Confidence                000                0 0  0      000   00000000                    00         


Q ss_pred             -cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          664 -PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       664 -~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                       ......++++|+|+++|++|..++  +.....+.+.+...   .++++++++||... .+..+.+.+.+.+||++
T Consensus       240 ~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~---~~~~~i~~~GH~~~-~e~pe~v~~~i~~Fl~~  309 (310)
T d1b6ga_         240 AISFWQNDWNGQTFMAIGMKDKLLG--PDVMYPMKALINGC---PEPLEIADAGHFVQ-EFGEQVAREALKHFAET  309 (310)
T ss_dssp             HHHHHHHTCCSEEEEEEETTCSSSS--HHHHHHHHHHSTTC---CCCEEETTCCSCGG-GGHHHHHHHHHHHHHHT
T ss_pred             hhHHhhcccCCCeEEEEeCCCCCCC--HHHHHHHHHhcCCC---ccEEEECCCcCchh-hhCHHHHHHHHHHHHhC
Confidence             001124678999999999999998  77777776655432   35788999999764 55566777788888874


No 64 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.63  E-value=9.2e-14  Score=138.34  Aligned_cols=267  Identities=15%  Similarity=0.066  Sum_probs=167.7

Q ss_pred             eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475            6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL   85 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~   85 (751)
                      .|.++|+.+    ++..+..  +.+......+|||||++|+...         .....|.++|+.+++.........   
T Consensus        13 ~v~v~D~~t----~~~~~~i--~~g~~p~~va~spdG~~l~v~~---------~~~~~i~v~d~~t~~~~~~~~~~~---   74 (301)
T d1l0qa2          13 NISVIDVTS----NKVTATI--PVGSNPMGAVISPDGTKVYVAN---------AHSNDVSIIDTATNNVIATVPAGS---   74 (301)
T ss_dssp             EEEEEETTT----TEEEEEE--ECSSSEEEEEECTTSSEEEEEE---------GGGTEEEEEETTTTEEEEEEECSS---
T ss_pred             EEEEEECCC----CeEEEEE--ECCCCceEEEEeCCCCEEEEEE---------CCCCEEEEEECCCCceeeeeeccc---
Confidence            599999988    8766543  2333456789999999997643         344689999999887554332222   


Q ss_pred             cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-
Q 004475           86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-  164 (751)
Q Consensus        86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-  164 (751)
                        ....++|++||+.+++.....                                                ..+.+++. 
T Consensus        75 --~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~  104 (301)
T d1l0qa2          75 --SPQGVAVSPDGKQVYVTNMAS------------------------------------------------STLSVIDTT  104 (301)
T ss_dssp             --SEEEEEECTTSSEEEEEETTT------------------------------------------------TEEEEEETT
T ss_pred             --ccccccccccccccccccccc------------------------------------------------ceeeecccc
Confidence              246789999999888764320                                                35666777 


Q ss_pred             CCC-ceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475          165 DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG  243 (751)
Q Consensus       165 ~G~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~  243 (751)
                      +++ ...+..........|+|||+++++....            ...+.+++..+..........             ..
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~-------------~~  159 (301)
T d1l0qa2         105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG-------------RS  159 (301)
T ss_dssp             TTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------SS
T ss_pred             cceeeeeccccccceEEEeecCCCeeeeeecc------------ccceeeeeccccceeeecccC-------------CC
Confidence            553 3444444566788999999999887543            235678888766544322211             22


Q ss_pred             CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccc
Q 004475          244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQ  322 (751)
Q Consensus       244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~  322 (751)
                      +..+.++||++. ++.+..           ....+.+....   ............... ..|+++|+.++..... ...
T Consensus       160 ~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~  223 (301)
T d1l0qa2         160 PKGIAVTPDGTK-VYVANF-----------DSMSISVIDTV---TNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD-KYF  223 (301)
T ss_dssp             EEEEEECTTSSE-EEEEET-----------TTTEEEEEETT---TTEEEEEEECSSEEEEEEECTTSSEEEEEEEC-SSC
T ss_pred             ceEEEeeccccc-eeeecc-----------ccccccccccc---ceeeeecccccCCcceeecccccccccccccc-cee
Confidence            457899999998 555431           11234444442   222222233334445 8899999998765422 233


Q ss_pred             eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475          323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN  402 (751)
Q Consensus       323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~  402 (751)
                      ..|+++|+.++  +.......... ...      ++|||||++|+....                    ....|.+||++
T Consensus       224 ~~v~v~D~~t~--~~~~~~~~~~~-~~~------va~spdg~~l~va~~--------------------~~~~i~v~D~~  274 (301)
T d1l0qa2         224 NTVSMIDTGTN--KITARIPVGPD-PAG------IAVTPDGKKVYVALS--------------------FCNTVSVIDTA  274 (301)
T ss_dssp             CEEEEEETTTT--EEEEEEECCSS-EEE------EEECTTSSEEEEEET--------------------TTTEEEEEETT
T ss_pred             eeeeeeecCCC--eEEEEEcCCCC-EEE------EEEeCCCCEEEEEEC--------------------CCCeEEEEECC
Confidence            57899998875  22222221111 111      889999998876651                    23379999999


Q ss_pred             CCceeEEe
Q 004475          403 TGSKERIW  410 (751)
Q Consensus       403 ~g~~~~l~  410 (751)
                      +++.....
T Consensus       275 t~~~~~~~  282 (301)
T d1l0qa2         275 TNTITATM  282 (301)
T ss_dssp             TTEEEEEE
T ss_pred             CCeEEEEE
Confidence            99765443


No 65 
>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}
Probab=99.62  E-value=3.2e-15  Score=145.13  Aligned_cols=180  Identities=8%  Similarity=-0.009  Sum_probs=116.6

Q ss_pred             hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      .....|.++||.|++   .+.+|+|.+.....   ..+...+++.+++   .+..  ..+++.++||||||.+++.++..
T Consensus        20 ~~~~~L~~~g~~Via---~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~---~~~~--~~~~~~lvGhS~Gg~ia~~~a~~   91 (256)
T d3c70a1          20 KLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTFL---EALP--PGEKVILVGESCGGLNIAIAADK   91 (256)
T ss_dssp             THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHHH---HHSC--TTCCEEEEEETTHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCEEEE---EcCCCCCCCCCCCCCCCCHHHHHHHhhhhh---hhhc--cccceeecccchHHHHHHHHhhc
Confidence            356678889999999   67778887754322   2334444444433   3332  24689999999999999999999


Q ss_pred             CCCceeEEEEccCCCCCCCCccCcc--------------------cc----c-cc---chh---------hH--------
Q 004475          622 APHLFCCGIARSGSYNKTLTPFGFQ--------------------TE----F-RT---LWE---------AT--------  656 (751)
Q Consensus       622 ~p~~~~~~v~~~~~~d~~~~~~~~~--------------------~~----~-~~---~~~---------~~--------  656 (751)
                      +|++++++|++++............                    ..    . ..   ...         ..        
T Consensus        92 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (256)
T d3c70a1          92 YCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKML  171 (256)
T ss_dssp             HGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHH
T ss_pred             CchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcchhhHHHhhhh
Confidence            9999999999887543211110000                    00    0 00   000         00        


Q ss_pred             --------HHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHH
Q 004475          657 --------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHV  728 (751)
Q Consensus       657 --------~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~  728 (751)
                              ..............+++|+++++|++|..+|  +...+.+.+.+    ..+++++++++||..+ .+..+++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~agH~~~-~e~P~~~  244 (256)
T d3c70a1         172 TRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQIENY----KPDKVYKVEGGDHKLQ-LTKTKEI  244 (256)
T ss_dssp             CCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHHHHHS----CCSEEEECCSCCSCHH-HHSHHHH
T ss_pred             hhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCC--HHHHHHHHHHC----CCCEEEEECCCCCchH-HhCHHHH
Confidence                    0000111122233457999999999999998  77776666554    3458999999999876 6677888


Q ss_pred             HHHHHHHHHHH
Q 004475          729 IWETDRWLQKY  739 (751)
Q Consensus       729 ~~~~~~fl~~~  739 (751)
                      .+.+.+|++++
T Consensus       245 ~~~l~~~~~~~  255 (256)
T d3c70a1         245 AEILQEVADTY  255 (256)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhc
Confidence            88888888764


No 66 
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}
Probab=99.62  E-value=1.2e-15  Score=151.76  Aligned_cols=210  Identities=16%  Similarity=0.103  Sum_probs=135.1

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|.++....+-|++        .|+||++||.+.           +...|.    .....| .+||.|++   .+.+|+
T Consensus        14 ~~g~~i~y~~~G~~~--------~p~lvllHG~~~-----------~~~~~~----~~~~~L-~~~~~vi~---~d~~G~   66 (291)
T d1bn7a_          14 VLGERMHYVDVGPRD--------GTPVLFLHGNPT-----------SSYLWR----NIIPHV-APSHRCIA---PDLIGM   66 (291)
T ss_dssp             ETTEEEEEEEESCSS--------SSCEEEECCTTC-----------CGGGGT----TTHHHH-TTTSCEEE---ECCTTS
T ss_pred             ECCEEEEEEEeCCCC--------CCeEEEECCCCC-----------CHHHHH----HHHHHH-hcCCEEEE---EeCCCC
Confidence            467888887776543        367999999641           112222    223444 56999999   566677


Q ss_pred             CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-cCc
Q 004475          569 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FGF  645 (751)
Q Consensus       569 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~~~  645 (751)
                      |.+...  ....++..+|+.++++.+      +..++.++||||||.+++.++.++|+++++++++++........ +..
T Consensus        67 G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~  140 (291)
T d1bn7a_          67 GKSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPE  140 (291)
T ss_dssp             TTSCCCSCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCH
T ss_pred             ccccccccccchhHHHHHHhhhhhhh------ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhh
Confidence            776432  233456666666666554      34689999999999999999999999999999877543211000 000


Q ss_pred             -----------cc-------------------ccccch--hhHHHH-----------------HhcC-------------
Q 004475          646 -----------QT-------------------EFRTLW--EATNVY-----------------IEMS-------------  663 (751)
Q Consensus       646 -----------~~-------------------~~~~~~--~~~~~~-----------------~~~~-------------  663 (751)
                                 ..                   .....+  .....+                 ....             
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (291)
T d1bn7a_         141 FARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVE  220 (291)
T ss_dssp             HHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred             hhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhh
Confidence                       00                   000000  000000                 0000             


Q ss_pred             -cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          664 -PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       664 -~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                       ....+.++++|+|+++|++|.++|  ...+..+.+.++    .++++++++++|... .+..+++.+.+.+||+.
T Consensus       221 ~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fL~~  289 (291)
T d1bn7a_         221 AYMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPG  289 (291)
T ss_dssp             HHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCGG-GTCHHHHHHHHHHHSGG
T ss_pred             hhhhhhhcCCCCEEEEEeCCCCCcC--HHHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHHh
Confidence             011235688999999999999998  888877776653    468999999999765 56677888899999864


No 67 
>d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61  E-value=6.3e-15  Score=144.45  Aligned_cols=244  Identities=15%  Similarity=0.181  Sum_probs=145.2

Q ss_pred             eEEEEEEcC-CCceEEEEEEcCCCCCCC---CCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeE
Q 004475          481 KEMIKYQRK-DGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA  556 (751)
Q Consensus       481 ~e~i~~~~~-~~~~i~~~~~~P~~~~~~---~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  556 (751)
                      ..++++.+. -+.++...+|+|+++...   +++++|+|+++||.+           ++...|.... .........|++
T Consensus        14 ~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~-----------~~~~~w~~~~-~~~~~~~~~~~~   81 (299)
T d1pv1a_          14 LIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT-----------CTPDNASEKA-FWQFQADKYGFA   81 (299)
T ss_dssp             EEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTT-----------CCHHHHHHHS-CHHHHHHHHTCE
T ss_pred             EEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCC-----------CCHHHHHHhh-hHHHHHHHcCCc
Confidence            445556653 467899999999987532   345799999999953           1112221111 123344567999


Q ss_pred             EEEcCCCCC-------------CCCCCCC----------CCchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEEeC
Q 004475          557 VLAGPSIPI-------------IGEGDKL----------PNDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGHS  609 (751)
Q Consensus       557 v~~~~~~~~-------------~g~g~~~----------~~~~~~~~~~~d~~~~v~~l~~~----~~id~~~i~l~G~S  609 (751)
                      |+.+...+.             .|...+.          ....+.+-+.+++...|+..-..    ...++++.+|.|+|
T Consensus        82 vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~S  161 (299)
T d1pv1a_          82 IVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHS  161 (299)
T ss_dssp             EEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEET
T ss_pred             eecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeec
Confidence            988432110             0111110          01123344455555555443211    11234689999999


Q ss_pred             hHHHHHHHHHHh--CCCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCccccc---CCC-CCCEEEEEcCCC
Q 004475          610 YGAFMTAHLLAH--APHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA---NKI-KKPILIIHGEVD  683 (751)
Q Consensus       610 ~GG~~a~~~a~~--~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~P~li~~G~~D  683 (751)
                      |||+.|+.++++  +|+++.++++.+|..+.....+...............+...++...+   .+. ..++++.+|++|
T Consensus       162 mGG~gAl~~al~~~~p~~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~D  241 (299)
T d1pv1a_         162 MGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSD  241 (299)
T ss_dssp             HHHHHHHHHHHHTGGGTCCSEEEEESCCCCSTTSHHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTCCEEEECCTTC
T ss_pred             ccHHHHHHHHHHhcCCCceEEEeeccCcCCcccccchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCcceeEecCCCC
Confidence            999999999986  48999999999998765433221111111001111122233333222   222 367999999999


Q ss_pred             CCCCCChH-HHHHHHHHHHhCCCc--EEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHhc
Q 004475          684 DKVGLFPM-QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL  741 (751)
Q Consensus       684 ~~vp~~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~  741 (751)
                      ...+  .. ..+.+.+++++++.+  +++...||.+|.+.   -+...+.+.+.|+.++|+
T Consensus       242 ~~~~--~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~---yW~~~i~~~l~f~a~~lg  297 (299)
T d1pv1a_         242 PFLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNLG  297 (299)
T ss_dssp             TTTT--TTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred             cchh--hhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence            9875  32 356788888877754  77888898889853   366778888999999885


No 68 
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.60  E-value=8.9e-13  Score=131.02  Aligned_cols=274  Identities=9%  Similarity=0.029  Sum_probs=167.7

Q ss_pred             EEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCce
Q 004475           45 IAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKI  124 (751)
Q Consensus        45 iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~  124 (751)
                      .|||..        .....|.++|+++++..+-.....     ....++|||||++|+....                  
T Consensus         3 ~~yV~~--------~~~~~v~v~D~~t~~~~~~i~~g~-----~p~~va~spdG~~l~v~~~------------------   51 (301)
T d1l0qa2           3 FAYIAN--------SESDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANA------------------   51 (301)
T ss_dssp             EEEEEE--------TTTTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEG------------------
T ss_pred             EEEEEE--------CCCCEEEEEECCCCeEEEEEECCC-----CceEEEEeCCCCEEEEEEC------------------
Confidence            467654        344679999999998544332222     2467899999999986632                  


Q ss_pred             eeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCCceEEeeeeCCCCceEEEEEecCCccccc
Q 004475          125 QSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKV  202 (751)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~  202 (751)
                                                    ....|.++|+ +++ ...+..+.....+.|++||+++++....       
T Consensus        52 ------------------------------~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   94 (301)
T d1l0qa2          52 ------------------------------HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA-------   94 (301)
T ss_dssp             ------------------------------GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT-------
T ss_pred             ------------------------------CCCEEEEEECCCCceeeeeeccccccccccccccccccccccc-------
Confidence                                          1147888999 663 3444444566789999999999886543       


Q ss_pred             ccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeecc
Q 004475          203 PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQP  282 (751)
Q Consensus       203 ~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~  282 (751)
                           ...+.+++..+++........             .....+.|+|||+. +++...           ....+.+++
T Consensus        95 -----~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~dg~~-~~~~~~-----------~~~~~~~~~  144 (301)
T d1l0qa2          95 -----SSTLSVIDTTSNTVAGTVKTG-------------KSPLGLALSPDGKK-LYVTNN-----------GDKTVSVIN  144 (301)
T ss_dssp             -----TTEEEEEETTTTEEEEEEECS-------------SSEEEEEECTTSSE-EEEEET-----------TTTEEEEEE
T ss_pred             -----cceeeecccccceeeeecccc-------------ccceEEEeecCCCe-eeeeec-----------cccceeeee
Confidence                 335778888776544332211             12347899999998 555431           123566666


Q ss_pred             CCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCC
Q 004475          283 AEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS  361 (751)
Q Consensus       283 ~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp  361 (751)
                      ..   ............... +.++||++.++.....   ...++..+....  ............ ..      +++++
T Consensus       145 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~-~~------~~~~~  209 (301)
T d1l0qa2         145 TV---TKAVINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTN--SVIDTVKVEAAP-SG------IAVNP  209 (301)
T ss_dssp             TT---TTEEEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEECSSEE-EE------EEECT
T ss_pred             cc---ccceeeecccCCCceEEEeeccccceeeeccc---ccccccccccce--eeeecccccCCc-ce------eeccc
Confidence            53   222222223333345 8899999988776522   234444444442  222222211111 11      67999


Q ss_pred             CCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEE
Q 004475          362 TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKIL  441 (751)
Q Consensus       362 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  441 (751)
                      ||+.+++...+                  .....|++||+.+++..........     +       ..++|||||++|+
T Consensus       210 ~g~~~~v~~~~------------------~~~~~v~v~D~~t~~~~~~~~~~~~-----~-------~~va~spdg~~l~  259 (301)
T d1l0qa2         210 EGTKAYVTNVD------------------KYFNTVSMIDTGTNKITARIPVGPD-----P-------AGIAVTPDGKKVY  259 (301)
T ss_dssp             TSSEEEEEEEC------------------SSCCEEEEEETTTTEEEEEEECCSS-----E-------EEEEECTTSSEEE
T ss_pred             ccccccccccc------------------ceeeeeeeeecCCCeEEEEEcCCCC-----E-------EEEEEeCCCCEEE
Confidence            99998776632                  1234789999998876544332211     2       2368999999887


Q ss_pred             EEEecCCCCCeEEEEEcCCCcee
Q 004475          442 TSKESKTEITQYHILSWPLKKSS  464 (751)
Q Consensus       442 ~~~~~~~~~~~l~~~~~~~g~~~  464 (751)
                      ++...   -..|.++|+.+++..
T Consensus       260 va~~~---~~~i~v~D~~t~~~~  279 (301)
T d1l0qa2         260 VALSF---CNTVSVIDTATNTIT  279 (301)
T ss_dssp             EEETT---TTEEEEEETTTTEEE
T ss_pred             EEECC---CCeEEEEECCCCeEE
Confidence            76533   347999999998754


No 69 
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}
Probab=99.60  E-value=1.3e-14  Score=143.06  Aligned_cols=196  Identities=17%  Similarity=0.147  Sum_probs=121.4

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV  589 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v  589 (751)
                      .|.||++||.+..+           ..|    ......++++||.|++   ++.+|+|.+...  ....+...+|+.+++
T Consensus        23 g~~illlHG~~~~~-----------~~~----~~~~~~l~~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~di~~~i   84 (279)
T d1hkha_          23 GQPVVLIHGYPLDG-----------HSW----ERQTRELLAQGYRVIT---YDRRGFGGSSKVNTGYDYDTFAADLHTVL   84 (279)
T ss_dssp             SEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCCH-----------HHH----HHHHHHHHHCCCEEEE---EechhhCCccccccccchhhhhhhhhhhh
Confidence            47799999964211           111    2345567889999999   666777776432  223556677777777


Q ss_pred             HHHHHcCCCCCCcEEEEEeChHH-HHHHHHHHhCCCceeEEEEccCCCCCCCCcc----Cccccc-----------ccch
Q 004475          590 EEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIARSGSYNKTLTPF----GFQTEF-----------RTLW  653 (751)
Q Consensus       590 ~~l~~~~~id~~~i~l~G~S~GG-~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~----~~~~~~-----------~~~~  653 (751)
                      +.+      +.+++.++|||||| .++..++.++|+++.+++++++.........    ......           ...|
T Consensus        85 ~~l------~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (279)
T d1hkha_          85 ETL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAW  158 (279)
T ss_dssp             HHH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH
T ss_pred             hhc------CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhh
Confidence            665      33589999999996 5566667778999999999876532111000    000000           0000


Q ss_pred             --------------------hh-H----HHHHhcC-----------------cccccCCCCCCEEEEEcCCCCCCCCChH
Q 004475          654 --------------------EA-T----NVYIEMS-----------------PITHANKIKKPILIIHGEVDDKVGLFPM  691 (751)
Q Consensus       654 --------------------~~-~----~~~~~~~-----------------~~~~~~~~~~P~li~~G~~D~~vp~~~~  691 (751)
                                          .. .    .......                 .+..+.++++|+|+++|++|..+|  ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~  236 (279)
T d1hkha_         159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--ID  236 (279)
T ss_dssp             HHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TT
T ss_pred             hhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccC--HH
Confidence                                00 0    0000000                 011234468999999999999987  54


Q ss_pred             H-HHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          692 Q-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       692 ~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                      . .+.+.+.+    ..++++++++++|... .+..+++...+.+||.+
T Consensus       237 ~~~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~k  279 (279)
T d1hkha_         237 ATARRFHQAV----PEADYVEVEGAPHGLL-WTHADEVNAALKTFLAK  279 (279)
T ss_dssp             TTHHHHHHHC----TTSEEEEETTCCTTHH-HHTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhC----CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHCc
Confidence            3 34444333    3468999999999865 56778888999999863


No 70 
>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]}
Probab=99.59  E-value=2.9e-15  Score=145.88  Aligned_cols=192  Identities=11%  Similarity=0.083  Sum_probs=119.1

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE  591 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~  591 (751)
                      .|.||++||.+.           +...|.    .+...| .++|.|++   ++.+|+|.+......   .+.|   .++.
T Consensus        11 ~~~lvllHG~~~-----------~~~~~~----~~~~~L-~~~~~vi~---~D~~G~G~S~~~~~~---~~~d---~~~~   65 (256)
T d1m33a_          11 NVHLVLLHGWGL-----------NAEVWR----CIDEEL-SSHFTLHL---VDLPGFGRSRGFGAL---SLAD---MAEA   65 (256)
T ss_dssp             SSEEEEECCTTC-----------CGGGGG----GTHHHH-HTTSEEEE---ECCTTSTTCCSCCCC---CHHH---HHHH
T ss_pred             CCeEEEECCCCC-----------CHHHHH----HHHHHH-hCCCEEEE---EeCCCCCCccccccc---cccc---cccc
Confidence            367889999641           111221    334444 47899999   566788876543221   1222   2233


Q ss_pred             HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCc-c-Cccccc--------------------
Q 004475          592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F-GFQTEF--------------------  649 (751)
Q Consensus       592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~-~-~~~~~~--------------------  649 (751)
                      +...   ...++.++||||||.+++.+|.++|+.+++++++.+........ + ......                    
T Consensus        66 ~~~~---~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (256)
T d1m33a_          66 VLQQ---APDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFL  142 (256)
T ss_dssp             HHTT---SCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---cccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHh
Confidence            3322   23689999999999999999999999999988876532211100 0 000000                    


Q ss_pred             -----cc-ch-h----------------------hHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHH
Q 004475          650 -----RT-LW-E----------------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL  700 (751)
Q Consensus       650 -----~~-~~-~----------------------~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l  700 (751)
                           .. .. .                      ....+...+....++++++|+|+++|++|..+|  ...+..+.+.+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p--~~~~~~l~~~~  220 (256)
T d1m33a_         143 ALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLW  220 (256)
T ss_dssp             HTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTTC
T ss_pred             hhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCC--HHHHHHHHHHC
Confidence                 00 00 0                      001112223334567789999999999999998  77665555433


Q ss_pred             HhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          701 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       701 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                          ..++++++++++|... .+..+++.+.+.+||++
T Consensus       221 ----~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~  253 (256)
T d1m33a_         221 ----PHSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR  253 (256)
T ss_dssp             ----TTCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred             ----CCCEEEEECCCCCchH-HHCHHHHHHHHHHHHHH
Confidence                3568999999999765 56788889999999874


No 71 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.59  E-value=3.4e-13  Score=141.80  Aligned_cols=325  Identities=6%  Similarity=-0.003  Sum_probs=174.0

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      ....|.+++|.+.+.+|..        ...+.|.++|+++++...-.....     .+..+++||||++|+..+.+    
T Consensus        20 ~p~~~~~~~d~~~~~~V~~--------~~dg~v~vwD~~t~~~~~~l~~g~-----~~~~vafSPDGk~l~~~~~d----   82 (426)
T d1hzua2          20 RPKKQLNDLDLPNLFSVTL--------RDAGQIALVDGDSKKIVKVIDTGY-----AVHISRMSASGRYLLVIGRD----   82 (426)
T ss_dssp             SCSSCCSCCCGGGEEEEEE--------TTTTEEEEEETTTCSEEEEEECCS-----SEEEEEECTTSCEEEEEETT----
T ss_pred             CCCcccccCCCCeEEEEEE--------cCCCEEEEEECCCCcEEEEEeCCC-----CeeEEEECCCCCEEEEEeCC----
Confidence            4456889999999988865        455889999999988544332222     36788999999999876432    


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce---ecCC---C-ceEEeeeeC
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGT---P-AVYTAVEPS  183 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~---~lt~---~-~~~~~~~~S  183 (751)
                                                                   ..+.++|+ +++..   ++..   + ....+++||
T Consensus        83 ---------------------------------------------~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~s  117 (426)
T d1hzua2          83 ---------------------------------------------ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKG  117 (426)
T ss_dssp             ---------------------------------------------SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTT
T ss_pred             ---------------------------------------------CCEEEEEccCCceeEEEEEeCCCCCcceEEeeeec
Confidence                                                         36778888 56432   2221   2 345688999


Q ss_pred             CCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEec
Q 004475          184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ  263 (751)
Q Consensus       184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~  263 (751)
                      |||++|++....            ...+.+||..++....+............+. .......+..++|++. +++..  
T Consensus       118 pDG~~l~v~~~~------------~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~s~d~~~-~~~~~--  181 (426)
T d1hzua2         118 YEDRYTIAGAYW------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYH-PEPRVAAIIASHEHPE-FIVNV--  181 (426)
T ss_dssp             CTTTEEEEEEEE------------SSEEEEEETTTCCEEEEEECCEECSSSCCEE-SCCCEEEEEECSSSSE-EEEEE--
T ss_pred             CCCCEEEEeecC------------CCeEEEEcCCccceeEEeeccCCCccceeec-CCCceeEEEECCCCCE-EEEec--
Confidence            999999887544            3467889998776554433322111000000 0111224566777776 33322  


Q ss_pred             cCCCCccccCcccceeeccCCCCCCCCceEe--EeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCC-----
Q 004475          264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEIL--HKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-----  335 (751)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l--~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-----  335 (751)
                               ...+.+..+...   ......+  ........ +.++|+|++++.....   ...+..++..++..     
T Consensus       182 ---------~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~---~~~~~~~~~~~~~~~~~~~  246 (426)
T d1hzua2         182 ---------KETGKVLLVNYK---DIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANN---SNKVAVIDSKDRRLSALVD  246 (426)
T ss_dssp             ---------TTTTEEEEEECS---SSSSCEEEEEECCSSEEEEEECTTSCEEEEEETT---CSEEEEEETTTTEEEEEEE
T ss_pred             ---------CCCCeEEEEEec---cccceeeEEeccCCccEeeeECCCCcEEEeeeec---ccceeeeecccccEEEEec
Confidence                     122345555443   1121111  22233344 8899999987665421   11222222222100     


Q ss_pred             -----------------------------cceeeeeccccc-----------ccC-CCCCCCeeeCCCCCEEEEeeeecC
Q 004475          336 -----------------------------APRVLFDRVFEN-----------VYS-DPGSPMMTRTSTGTNVIAKIKKEN  374 (751)
Q Consensus       336 -----------------------------~~~~l~~~~~~~-----------~~~-~~~~~~~~~spDG~~l~~~~~~~~  374 (751)
                                                   ....+.......           ... ......+++||||++|+...... 
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~-  325 (426)
T d1hzua2         247 VGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFN-  325 (426)
T ss_dssp             CSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTC-
T ss_pred             cCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCC-
Confidence                                         000000000000           000 01122377899999887643100 


Q ss_pred             CcceEEEEccCCCCCCCCCceeEEEecCCCcee-EEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEec-CCCCCe
Q 004475          375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES-KTEITQ  452 (751)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~  452 (751)
                                   ........|.+||+++++.. ++......  . .........-.++|||||++++++.+. ......
T Consensus       326 -------------~s~~~~~tv~vwd~~t~~~~~~~~~~~~~--~-~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~  389 (426)
T d1hzua2         326 -------------PDARISQSVAVFDLKNLDAKYQVLPIAEW--A-DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSA  389 (426)
T ss_dssp             -------------SSHHHHTCEEEEETTCTTSCCEEECHHHH--H-CCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCE
T ss_pred             -------------CCcccCCEEEEEECCCCCcCeEEeccchh--c-ccCCCCccEEEEEECCCCCEEEEEEecCCCCCCe
Confidence                         00011236899999988753 33321110  0 000000001124799999999887654 345667


Q ss_pred             EEEEEcCCCceeEe
Q 004475          453 YHILSWPLKKSSQI  466 (751)
Q Consensus       453 l~~~~~~~g~~~~l  466 (751)
                      |.++|..++++...
T Consensus       390 i~v~D~~T~k~~~~  403 (426)
T d1hzua2         390 LVVVDDKTLKLKAV  403 (426)
T ss_dssp             EEEEETTTTEEEEE
T ss_pred             EEEEECCCCeEEEE
Confidence            99999999886643


No 72 
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=3.5e-13  Score=136.90  Aligned_cols=245  Identities=10%  Similarity=-0.009  Sum_probs=152.1

Q ss_pred             eeEEeecCCCCCCCCccc----ccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC
Q 004475            6 GIGIHRLLPDDSLGPEKE----VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP   81 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~----l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~   81 (751)
                      .|.+||+..    +..+.    +........+...+|||||++|+...          ....|.++++.....+......
T Consensus        73 ~V~iWd~~~----~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~  138 (337)
T d1gxra_          73 CVKVWDISH----PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----------EASTLSIWDLAAPTPRIKAELT  138 (337)
T ss_dssp             EEEEEETTS----TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE----------SSSEEEEEECCCC--EEEEEEE
T ss_pred             EEEEEEccC----CcccceeEEeeecCCCCcEEEEEEcCCCCEEEEee----------cccccccccccccccccccccc
Confidence            589999987    43322    22112223578899999999998753          2356777777654433221111


Q ss_pred             CccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475           82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL  161 (751)
Q Consensus        82 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  161 (751)
                      .+  ...+....|+||+..|+....+                                                 ..+.+
T Consensus       139 ~~--~~~v~~~~~~~~~~~l~s~~~d-------------------------------------------------~~i~~  167 (337)
T d1gxra_         139 SS--APACYALAISPDSKVCFSCCSD-------------------------------------------------GNIAV  167 (337)
T ss_dssp             CS--SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEE
T ss_pred             cc--cccccccccccccccccccccc-------------------------------------------------ccccc
Confidence            11  1135677899999988876432                                                 35677


Q ss_pred             EcC-CCCceec-CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccC
Q 004475          162 GSL-DGTAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN  238 (751)
Q Consensus       162 ~~~-~G~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~  238 (751)
                      +++ +++.... ..+ ..+..++|+++|+.+++...+             ..+.+||+.+++........          
T Consensus       168 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d-------------~~v~i~d~~~~~~~~~~~~~----------  224 (337)
T d1gxra_         168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT----------  224 (337)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS----------
T ss_pred             ccccccccccccccccccccccccccccccccccccc-------------ccccccccccceeecccccc----------
Confidence            777 5543332 323 667889999999999886543             35889999876543322211          


Q ss_pred             CccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeee
Q 004475          239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETW  317 (751)
Q Consensus       239 ~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~  317 (751)
                         ..+..++|+|+++. ++...            ..+.++++++.   .............+. +.|+|||+.|+.++.
T Consensus       225 ---~~i~~l~~~~~~~~-l~~~~------------~d~~i~i~d~~---~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~  285 (337)
T d1gxra_         225 ---SQIFSLGYCPTGEW-LAVGM------------ESSNVEVLHVN---KPDKYQLHLHESCVLSLKFAYCGKWFVSTGK  285 (337)
T ss_dssp             ---SCEEEEEECTTSSE-EEEEE------------TTSCEEEEETT---SSCEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ---cceEEEEEcccccc-cceec------------ccccccccccc---ccccccccccccccceEEECCCCCEEEEEeC
Confidence               23457899999998 55433            23578888875   333334444455677 999999998876552


Q ss_pred             ecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          318 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       318 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                          ...|.+.+..++  ........ ...+..      ++|||||++|+..+
T Consensus       286 ----Dg~i~iwd~~~~--~~~~~~~~-~~~v~~------~~~s~d~~~l~t~s  325 (337)
T d1gxra_         286 ----DNLLNAWRTPYG--ASIFQSKE-SSSVLS------CDISVDDKYIVTGS  325 (337)
T ss_dssp             ----TSEEEEEETTTC--CEEEEEEC-SSCEEE------EEECTTSCEEEEEE
T ss_pred             ----CCeEEEEECCCC--CEEEEccC-CCCEEE------EEEeCCCCEEEEEe
Confidence                245677777764  22222222 122222      77999999998876


No 73 
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.57  E-value=4.6e-13  Score=134.13  Aligned_cols=222  Identities=11%  Similarity=0.098  Sum_probs=136.8

Q ss_pred             eeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc
Q 004475            6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL   85 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~   85 (751)
                      .|+++++..    +...++-. .....+...+|||||++||...          ..+.|.++++.+++.........+  
T Consensus        39 ~v~i~~~~~----~~~~~~~~-~H~~~v~~~~~sp~g~~latg~----------~dg~i~iwd~~~~~~~~~~~~~~~--  101 (311)
T d1nr0a1          39 SVYTVPVGS----LTDTEIYT-EHSHQTTVAKTSPSGYYCASGD----------VHGNVRIWDTTQTTHILKTTIPVF--  101 (311)
T ss_dssp             EEEEEETTC----SSCCEEEC-CCSSCEEEEEECTTSSEEEEEE----------TTSEEEEEESSSTTCCEEEEEECS--
T ss_pred             EEEEEECCC----CceeEEEc-CCCCCEEEEEEeCCCCeEeccc----------cCceEeeeeeeccccccccccccc--
Confidence            589999987    76655431 2233689999999999998753          336778888877653221111111  


Q ss_pred             cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC
Q 004475           86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD  165 (751)
Q Consensus        86 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  165 (751)
                      ...+..++|+|||+.|+..+.....                                             ...||.++ +
T Consensus       102 ~~~v~~v~~s~d~~~l~~~~~~~~~---------------------------------------------~~~v~~~~-~  135 (311)
T d1nr0a1         102 SGPVKDISWDSESKRIAAVGEGRER---------------------------------------------FGHVFLFD-T  135 (311)
T ss_dssp             SSCEEEEEECTTSCEEEEEECCSSC---------------------------------------------SEEEEETT-T
T ss_pred             cCccccccccccccccccccccccc---------------------------------------------cccccccc-c
Confidence            1147789999999999877532110                                             02344443 4


Q ss_pred             C-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475          166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG  243 (751)
Q Consensus       166 G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~  243 (751)
                      + ....+..+ ..+..++|+|||++++++...            ...+.+||..+.+......            .....
T Consensus       136 ~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~------------d~~i~i~d~~~~~~~~~~~------------~~~~~  191 (311)
T d1nr0a1         136 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSD------------DNTVAIFEGPPFKFKSTFG------------EHTKF  191 (311)
T ss_dssp             CCBCBCCCCCSSCEEEEEECSSSSCEEEEEET------------TSCEEEEETTTBEEEEEEC------------CCSSC
T ss_pred             ccccccccccccccccccccccceeeeccccc------------ccccccccccccccccccc------------ccccc
Confidence            4 34455555 678899999999986665433            2358899998765443321            11233


Q ss_pred             CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe-------EeeceeEE-EEEecCCceEEEe
Q 004475          244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-------HKLDLRFS-VSWCDDSLALVNE  315 (751)
Q Consensus       244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-------~~~~~~~~-~~~spdg~~l~~~  315 (751)
                      +..+.|+|||+. ++...            ..+.+.+++...  +.....+       ......+. ++|+|||++|+.+
T Consensus       192 i~~v~~~p~~~~-l~~~~------------~d~~v~~~d~~~--~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tg  256 (311)
T d1nr0a1         192 VHSVRYNPDGSL-FASTG------------GDGTIVLYNGVD--GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA  256 (311)
T ss_dssp             EEEEEECTTSSE-EEEEE------------TTSCEEEEETTT--CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred             ccccccCccccc-ccccc------------cccccccccccc--ccccccccccccccccccccccccccCCCCCEEEEE
Confidence            568999999997 55543            224566666641  1111111       11234566 8999999988865


Q ss_pred             eeecccceeEEEecCCCC
Q 004475          316 TWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       316 ~~~~~~~~~l~~~~~~~~  333 (751)
                      +.    ...|.+.|..++
T Consensus       257 s~----Dg~v~iwd~~t~  270 (311)
T d1nr0a1         257 SA----DKTIKIWNVATL  270 (311)
T ss_dssp             ET----TSEEEEEETTTT
T ss_pred             eC----CCeEEEEECCCC
Confidence            42    235777777774


No 74 
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}
Probab=99.56  E-value=5.4e-14  Score=140.64  Aligned_cols=121  Identities=17%  Similarity=0.077  Sum_probs=80.5

Q ss_pred             EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475          482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP  561 (751)
Q Consensus       482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~  561 (751)
                      ++-.+...||.+|....+-+++        .|.||++||.+..+           ..|.     ....++++||.|++  
T Consensus        12 ~~~~v~~~dG~~i~y~~~G~~~--------g~pvvllHG~~~~~-----------~~w~-----~~~~~l~~~~~vi~--   65 (313)
T d1wm1a_          12 DSGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGG-----------ISPH-----HRQLFDPERYKVLL--   65 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCC-----------CCGG-----GGGGSCTTTEEEEE--
T ss_pred             cCCEEEeCCCcEEEEEEecCCC--------CCeEEEECCCCCcc-----------cchH-----HHHHHhhcCCEEEE--
Confidence            3333555688899888886543        36788999965211           1121     11233567999999  


Q ss_pred             CCCCCCCCCCCCCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          562 SIPIIGEGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       562 ~~~~~g~g~~~~~~~----~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                       ++.+|+|.+.....    ......+|+...++.+      +..++.++|||+||.+++.++...|+++..+++.++.
T Consensus        66 -~D~rG~G~S~~~~~~~~~~~~~~~~d~~~~~~~~------~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~  136 (313)
T d1wm1a_          66 -FDQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF  136 (313)
T ss_dssp             -ECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred             -EeCCCcccccccccccccchhhHHHHHHhhhhcc------CCCcceeEeeecCCchhhHHHHHHhhhheeeeecccc
Confidence             56667777643221    2333344444443332      3468999999999999999999999999999988765


No 75 
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}
Probab=99.56  E-value=5.7e-14  Score=139.40  Aligned_cols=213  Identities=15%  Similarity=0.094  Sum_probs=126.0

Q ss_pred             EEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcC
Q 004475          482 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP  561 (751)
Q Consensus       482 e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~  561 (751)
                      +..++. .+|.++.....   +     .  .|+||++||.+.           +...|    ......| .++|.|++  
T Consensus         9 ~~~~~~-~~~~~l~y~~~---G-----~--gp~vv~lHG~~~-----------~~~~~----~~~~~~l-~~~~~vi~--   59 (293)
T d1ehya_           9 KHYEVQ-LPDVKIHYVRE---G-----A--GPTLLLLHGWPG-----------FWWEW----SKVIGPL-AEHYDVIV--   59 (293)
T ss_dssp             CEEEEE-CSSCEEEEEEE---E-----C--SSEEEEECCSSC-----------CGGGG----HHHHHHH-HTTSEEEE--
T ss_pred             cceEEE-ECCEEEEEEEE---C-----C--CCeEEEECCCCC-----------CHHHH----HHHHHHH-hcCCEEEE--
Confidence            344444 35667765443   1     1  478999999641           11111    1233344 56899999  


Q ss_pred             CCCCCCCCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          562 SIPIIGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       562 ~~~~~g~g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                       .+.+|+|.+....      ....+..+|+.+.++.+      +..++.++||||||.+|+.++.++|+++.++|++++.
T Consensus        60 -~D~~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~  132 (293)
T d1ehya_          60 -PDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI  132 (293)
T ss_dssp             -ECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred             -ecCCcccCCccccccccccccchhhhhHHHhhhhhc------CccccccccccccccchhcccccCccccceeeeeecc
Confidence             5566777653221      12334445444444332      3468999999999999999999999999999998875


Q ss_pred             CCCCCC-ccCcc-----------c---------cc----cc-------ch---------hhH-----------------H
Q 004475          636 YNKTLT-PFGFQ-----------T---------EF----RT-------LW---------EAT-----------------N  657 (751)
Q Consensus       636 ~d~~~~-~~~~~-----------~---------~~----~~-------~~---------~~~-----------------~  657 (751)
                      ...... .....           .         ..    ..       .|         ...                 .
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (293)
T d1ehya_         133 QPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFN  212 (293)
T ss_dssp             CTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHH
T ss_pred             CccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhh
Confidence            321000 00000           0         00    00       00         000                 0


Q ss_pred             HHHh-cCc------ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHH
Q 004475          658 VYIE-MSP------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW  730 (751)
Q Consensus       658 ~~~~-~~~------~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~  730 (751)
                      .+.. ...      ......+++|+|+++|++|..+|  .....+..+.+   ..++++++++++||... .+..+.+.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~Pe~~~~  286 (293)
T d1ehya_         213 YYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKY---YSNYTMETIEDCGHFLM-VEKPEIAID  286 (293)
T ss_dssp             HHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHH---BSSEEEEEETTCCSCHH-HHCHHHHHH
T ss_pred             hhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCchH-HHCHHHHHH
Confidence            0000 000      00123467999999999999988  77665555443   34689999999999765 566778888


Q ss_pred             HHHHHH
Q 004475          731 ETDRWL  736 (751)
Q Consensus       731 ~~~~fl  736 (751)
                      .|.+||
T Consensus       287 ~I~~Ff  292 (293)
T d1ehya_         287 RIKTAF  292 (293)
T ss_dssp             HHHHHC
T ss_pred             HHHHhh
Confidence            888886


No 76 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.56  E-value=4.1e-12  Score=130.70  Aligned_cols=310  Identities=11%  Similarity=0.012  Sum_probs=169.4

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .....++||||++++....     .......+||++|.++++...-.....      ...++|||||++|++........
T Consensus        22 p~~~~a~spdg~~~~~~~~-----~~~~~~~~v~v~D~~tg~~~~~~~~~~------~~~~a~SpDG~~l~va~~~~~~~   90 (373)
T d2madh_          22 PTNDEAPGADGRRSYINLP-----AHHSAIIQQWVLDAGSGSILGHVNGGF------LPNPVAAHSGSEFALASTSFSRI   90 (373)
T ss_pred             CccccccCCCCCEEEEEcc-----cccCCCceEEEEECCCCCEEEEEeCCC------CccEEEcCCCCEEEEEeecCCcc
Confidence            4678889999999977532     112455789999999988554322221      23679999999999885432211


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCcee-cCCC--------ceEEeee
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-FGTP--------AVYTAVE  181 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~-lt~~--------~~~~~~~  181 (751)
                      ..                                       ......|.++|+ +++... +..+        .....+.
T Consensus        91 ~~---------------------------------------~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~  131 (373)
T d2madh_          91 AK---------------------------------------GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNA  131 (373)
T ss_pred             cc---------------------------------------cccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEE
Confidence            00                                       001146788888 664432 2211        1123578


Q ss_pred             eCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475          182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE  261 (751)
Q Consensus       182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~  261 (751)
                      |+|||+.+++.....           ...+.+++..+.+......                ....+.++|+|+. ++++.
T Consensus       132 ~s~dg~~~~v~~~~~-----------~~~~~~~~~~~~~~~~~~~----------------~~~~~~~s~~g~~-~~v~~  183 (373)
T d2madh_         132 NTPNNADLLFFQFAA-----------GPAVGLVVQGGSSDDQLLS----------------SPTCYHIHPGAPS-TFYLL  183 (373)
T ss_pred             EEeCCCcEEEEEEcC-----------CCceEEeeccCCeEEEEec----------------cceeEEEecCCCc-EEEEE
Confidence            999999988865432           2345566666554332211                1236789999998 54433


Q ss_pred             eccCCCCccccCcccceeeccCCCCCCCCceE-eEe-----e-ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475          262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK-----L-DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~-----~-~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~  333 (751)
                      .           ..+.+.+++.+   ...... ...     . ..... ..+++++..++...     ...++.++..+.
T Consensus       184 ~-----------~dg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~  244 (373)
T d2madh_         184 C-----------AQGGLAKTDHA---GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY-----SGKILQADISAA  244 (373)
T ss_pred             c-----------CCCeEEEEEcC---CceeeEEEeeeccccCccceeeeEEECCCceEEEecC-----CceEEEEEcCCC
Confidence            1           22466677664   222111 111     0 11112 45566665554322     234555555443


Q ss_pred             CCcceeeeec--ccccc---cCCC-CCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCcee
Q 004475          334 DVAPRVLFDR--VFENV---YSDP-GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE  407 (751)
Q Consensus       334 ~~~~~~l~~~--~~~~~---~~~~-~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~  407 (751)
                        ....+...  .....   ...+ .....++++||+.+++....    +..+...       .....+++||..+++..
T Consensus       245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~-------~~~~~v~~~d~~t~~~~  311 (373)
T d2madh_         245 --GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE----QSAWKLH-------AAAKEVTSVTGLVGQTS  311 (373)
T ss_pred             --eEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCC----CceEEee-------cCCCeEEEEECCCCcEE
Confidence              11111110  00000   0000 11126789999988776622    2222211       23347889999888765


Q ss_pred             EEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475          408 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ  465 (751)
Q Consensus       408 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~  465 (751)
                      .......            ....++|||||++++|......  ..|+++|+.+|+..+
T Consensus       312 ~~~~~~~------------~~~~~a~spDG~~~l~vt~~~d--~~v~v~D~~tg~~~~  355 (373)
T d2madh_         312 SQISLGH------------DVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAGDQDQ  355 (373)
T ss_pred             EEecCCC------------CeeEEEECCCCCEEEEEEeCCC--CeEEEEECCCCCEEE
Confidence            4433221            1223689999998877654433  569999999998654


No 77 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.54  E-value=1.9e-12  Score=132.14  Aligned_cols=314  Identities=12%  Similarity=0.074  Sum_probs=171.2

Q ss_pred             eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475           36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK  115 (751)
Q Consensus        36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~  115 (751)
                      .+.||||+++++...     .......+||++|+++|+.........      ...++|||||++|++........    
T Consensus         7 ~a~spdg~~~~v~~~-----~~~~~~~~v~v~D~~tg~~~~~~~~g~------~~~~a~SpDg~~l~v~~~~~~~~----   71 (355)
T d2bbkh_           7 EAPAPDARRVYVNDP-----AHFAAVTQQFVIDGEAGRVIGMIDGGF------LPNPVVADDGSFIAHASTVFSRI----   71 (355)
T ss_dssp             CCCCCCTTEEEEEEC-----GGGCSSEEEEEEETTTTEEEEEEEECS------SCEEEECTTSSCEEEEEEEEEET----
T ss_pred             EeeCCCCCEEEEEec-----ccCCCcCeEEEEECCCCcEEEEEECCC------CCceEEcCCCCEEEEEeCCCccc----
Confidence            467999999955421     111345789999999987544322221      23679999999998874311000    


Q ss_pred             CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCcee-cC--CC------ceEEeeeeCCC
Q 004475          116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD-FG--TP------AVYTAVEPSPD  185 (751)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~-lt--~~------~~~~~~~~SpD  185 (751)
                                                         ........|.++|+ +++... +.  ..      .....++||||
T Consensus        72 -----------------------------------~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~d  116 (355)
T d2bbkh_          72 -----------------------------------ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD  116 (355)
T ss_dssp             -----------------------------------TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred             -----------------------------------cccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecC
Confidence                                               00002257888999 664322 21  10      12235789999


Q ss_pred             CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccC
Q 004475          186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR  265 (751)
Q Consensus       186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~  265 (751)
                      |+++++.....           ...+.+++..+++.......+.....     ........+.+++||+. +++...   
T Consensus       117 g~~~~v~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~dg~~-~~v~~~---  176 (355)
T d2bbkh_         117 GKTLLFYQFSP-----------APAVGVVDLEGKAFKRMLDVPDCYHI-----FPTAPDTFFMHCRDGSL-AKVAFG---  176 (355)
T ss_dssp             SSEEEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEEE-----EEEETTEEEEEETTSCE-EEEECC---
T ss_pred             CCeeEEecCCC-----------CceeeeeecCCCcEeeEEecCCcceE-----eecCCcceEEEcCCCCE-EEEEec---
Confidence            99998865432           23577888887655433222211000     00112335789999997 444321   


Q ss_pred             CCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee--e
Q 004475          266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF--D  342 (751)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~--~  342 (751)
                              ....+.+.+.......       ...... +.+++++..+++...    ...+++++..++  ....+.  .
T Consensus       177 --------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~--~~~~~~~~~  235 (355)
T d2bbkh_         177 --------TEGTPEITHTEVFHPE-------DEFLINHPAYSQKAGRLVWPTY----TGKIHQIDLSSG--DAKFLPAVE  235 (355)
T ss_dssp             --------SSSCCEEEECCCCSCT-------TSCBCSCCEEETTTTEEEEEBT----TSEEEEEECTTS--SCEECCCEE
T ss_pred             --------CCCeEEEEecccccce-------ecceeeeccccCCCCeEEEecC----CCeEEEEecCCC--cEEEEeccC
Confidence                    1122333332210000       011112 467788887777652    346788887764  222221  1


Q ss_pred             cccc---cc-cCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhh
Q 004475          343 RVFE---NV-YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF  418 (751)
Q Consensus       343 ~~~~---~~-~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~  418 (751)
                      ....   .. +...+...+++++||+.+++.....           ...........|++||..+++....+....    
T Consensus       236 ~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~-----------~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~----  300 (355)
T d2bbkh_         236 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR-----------DEWRHKTASRFVVVLDAKTGERLAKFEMGH----  300 (355)
T ss_dssp             SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC-----------CTTCTTSCEEEEEEEETTTCCEEEEEEEEE----
T ss_pred             CcccceEeeeeeccceEEEEEeCCCCeEEEEeccC-----------CceeecCCCCeEEEEeCCCCcEEEEecCCC----
Confidence            1100   00 0001122377899999888776431           001112234579999999887654433221    


Q ss_pred             hceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475          419 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ  465 (751)
Q Consensus       419 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~  465 (751)
                              ....++|||||+.+++.....  ...|+++|+.+|+..+
T Consensus       301 --------~~~~~a~spDG~~~l~v~~~~--d~~i~v~D~~tg~~~~  337 (355)
T d2bbkh_         301 --------EIDSINVSQDEKPLLYALSTG--DKTLYIHDAESGEELR  337 (355)
T ss_dssp             --------EECEEEECCSSSCEEEEEETT--TTEEEEEETTTCCEEE
T ss_pred             --------CEEEEEEcCCCCeEEEEEECC--CCEEEEEECCCCCEEE
Confidence                    122368999999877665433  3679999999998643


No 78 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.54  E-value=8.3e-13  Score=133.45  Aligned_cols=286  Identities=12%  Similarity=0.060  Sum_probs=148.2

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC   84 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~   84 (751)
                      -.|++|++..   .|..+.+..+..+..+...+|||||++|+....       .++...+|.++..++..+.+.....  
T Consensus        14 ~~I~v~~~~~---~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~-------~d~~i~~~~i~~~~~~~~~~~~~~~--   81 (333)
T d1ri6a_          14 QQIHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR-------PEFRVLAYRIAPDDGALTFAAESAL--   81 (333)
T ss_dssp             TEEEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEET-------TTTEEEEEEECTTTCCEEEEEEEEC--
T ss_pred             CcEEEEEEcC---CCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEEC-------CCCeEEEEEEeCCCCcEEEeeeccc--
Confidence            4699999976   133343332333345789999999999965431       1233444544444444444322111  


Q ss_pred             ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475           85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL  164 (751)
Q Consensus        85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  164 (751)
                       ......++|||||++|+......                                                ..+..++.
T Consensus        82 -~~~p~~l~~spDg~~l~v~~~~~------------------------------------------------~~v~~~~~  112 (333)
T d1ri6a_          82 -PGSLTHISTDHQGQFVFVGSYNA------------------------------------------------GNVSVTRL  112 (333)
T ss_dssp             -SSCCSEEEECTTSSEEEEEETTT------------------------------------------------TEEEEEEE
T ss_pred             -CCCceEEEEcCCCCEEeecccCC------------------------------------------------Cceeeecc
Confidence             11235689999999998874321                                                23333333


Q ss_pred             -CC---CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475          165 -DG---TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS  239 (751)
Q Consensus       165 -~G---~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~  239 (751)
                       .+   ........ .....+.+||||++++.....            ...+.+++...............      ...
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~------------~~~i~~~~~~~~~~~~~~~~~~~------~~~  174 (333)
T d1ri6a_         113 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK------------QDRICLFTVSDDGHLVAQDPAEV------TTV  174 (333)
T ss_dssp             ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG------------GTEEEEEEECTTSCEEEEEEEEE------ECS
T ss_pred             ccccceecccccCCCccceEEEeeecceeeeccccc------------cceeeEEEeccCCcceeeeceee------eee
Confidence             22   11122222 456678999999998887544            23466666653321111000000      001


Q ss_pred             ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE---eE------eeceeEE-EEEecCC
Q 004475          240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI---LH------KLDLRFS-VSWCDDS  309 (751)
Q Consensus       240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l~------~~~~~~~-~~~spdg  309 (751)
                      ....++.+.|++++.. ++......         ....++.+...   ......   +.      ....... ..+++|+
T Consensus       175 ~g~~p~~i~~~~~~~~-~~~~~~~~---------~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~  241 (333)
T d1ri6a_         175 EGAGPRHMVFHPNEQY-AYCVNELN---------SSVDVWELKDP---HGNIECVQTLDMMPENFSDTRWAADIHITPDG  241 (333)
T ss_dssp             TTCCEEEEEECTTSSE-EEEEETTT---------TEEEEEESSCT---TSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred             cCCCccEEEEecccee-EEeecccc---------CceEEEeeccc---ccceeeeeeeeeeecCCCccccceeEEEeccc
Confidence            1123467899999997 55433111         11123332221   111111   10      0112233 7899999


Q ss_pred             ceEEEeeeecccceeEEEecCCCCCCcceeeeeccc-ccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475          310 LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT  388 (751)
Q Consensus       310 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~  388 (751)
                      +.++.... ......+|.++.++.  ..+....... ....      .++|||||++|+....+                
T Consensus       242 ~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~------~~a~spDGk~l~va~~~----------------  296 (333)
T d1ri6a_         242 RHLYACDR-TASLITVFSVSEDGS--VLSKEGFQPTETQPR------GFNVDHSGKYLIAAGQK----------------  296 (333)
T ss_dssp             SEEEEEET-TTTEEEEEEECTTSC--CEEEEEEEECSSSCC------CEEECTTSSEEEEECTT----------------
T ss_pred             Cceeeecc-cCCeEEEEEEcCCCC--EEEEEEEeCCCCCee------EEEEeCCCCEEEEEECC----------------
Confidence            98765542 233456777776653  2122211111 1111      18899999998766521                


Q ss_pred             CCCCCceeEEEecCCCceeEE
Q 004475          389 PEGNIPFLDLFDINTGSKERI  409 (751)
Q Consensus       389 ~~~~~~~l~~~d~~~g~~~~l  409 (751)
                        .....||.+|.++|+++++
T Consensus       297 --~~~v~v~~id~~tG~l~~~  315 (333)
T d1ri6a_         297 --SHHISVYEIVGEQGLLHEK  315 (333)
T ss_dssp             --TCEEEEEEEETTTTEEEEE
T ss_pred             --CCeEEEEEEECCCCcEEEE
Confidence              2234567778888887665


No 79 
>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.53  E-value=1.8e-13  Score=133.29  Aligned_cols=217  Identities=10%  Similarity=0.055  Sum_probs=133.3

Q ss_pred             ceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEE
Q 004475          480 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL  558 (751)
Q Consensus       480 ~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~  558 (751)
                      ++|++++++. .+..++..++.|.         .|+|+++||.+.+         +....|.... .....++.++++|+
T Consensus         3 ~~e~~~v~s~~~~r~~~~~v~~~~---------~pvlylLhG~~g~---------~~~~~w~~~~-~~~~~~~~~~~iVV   63 (267)
T d1r88a_           3 PYENLMVPSPSMGRDIPVAFLAGG---------PHAVYLLDAFNAG---------PDVSNWVTAG-NAMNTLAGKGISVV   63 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEEEECCS---------SSEEEEECCSSCC---------SSSCHHHHTS-CHHHHHTTSSSEEE
T ss_pred             ceEEEEEecccCCceeeEEEECCC---------CCEEEEcCCCCCC---------CCcchhhhcc-HHHHHHhhCCeEEE
Confidence            4677888764 4557888887543         4899999994210         0001121111 23445667899999


Q ss_pred             EcCCCCCCCC-CCC--CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          559 AGPSIPIIGE-GDK--LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       559 ~~~~~~~~g~-g~~--~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      +++. +..++ ...  .....+...+.+   +++.+|.++..+|+++++|.|+||||++|+.+++++|++|+++++++|.
T Consensus        64 ~p~g-~~~~~y~~~~~~~~~~~~tfl~~---eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~  139 (267)
T d1r88a_          64 APAG-GAYSMYTNWEQDGSKQWDTFLSA---ELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF  139 (267)
T ss_dssp             EECC-CTTSTTSBCSSCTTCBHHHHHHT---HHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred             EECC-CCCcCCccccccccccHHHHHHH---HHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence            9654 11111 111  112234444444   4566777777789999999999999999999999999999999999998


Q ss_pred             CCCCCCccCc----------ccccccch--hhHHHHHhcCcccccCC---CCCCEEEEEcCCCCCCCC---------ChH
Q 004475          636 YNKTLTPFGF----------QTEFRTLW--EATNVYIEMSPITHANK---IKKPILIIHGEVDDKVGL---------FPM  691 (751)
Q Consensus       636 ~d~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~P~li~~G~~D~~vp~---------~~~  691 (751)
                      ++........          .......|  .....+.+++|..++++   ...++++.+|..|..+..         ...
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~  219 (267)
T d1r88a_         140 LYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMG  219 (267)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHH
T ss_pred             cCCCCccchhhhhhHHhhhcCCcHhhccCCcchHhHHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhh
Confidence            7643211000          00000011  11122344555544433   347799999999876530         013


Q ss_pred             HHHHHHHHHHhC-CCcEEEEEeCCCCCcC
Q 004475          692 QAERFFDALKGH-GALSRLVLLPFEHHVY  719 (751)
Q Consensus       692 ~~~~~~~~l~~~-~~~~~~~~~~~~~H~~  719 (751)
                      ...++.++|.+. +.++++...++++|.+
T Consensus       220 ~~~~~~~~l~~~~g~~~~~~~~~~G~H~W  248 (267)
T d1r88a_         220 NSRMFYNQYRSVGGHNGHFDFPASGDNGW  248 (267)
T ss_dssp             HHHHHHHHHHHTTCCSEEEECCSSCCSSH
T ss_pred             hHHHHHHHHHHcCCCcEEEEEcCCCeECh
Confidence            455677777765 4678888888899975


No 80 
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.51  E-value=1.9e-13  Score=143.89  Aligned_cols=85  Identities=15%  Similarity=-0.010  Sum_probs=56.6

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-c
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-I   83 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-~   83 (751)
                      ..|.+||+.+    ++.....  +.+......+|||||++|+..+          ....|.++++++++...+..... .
T Consensus        42 g~v~vwD~~t----~~~~~~l--~~g~~~~~vafSPDGk~l~~~~----------~d~~v~vwd~~t~~~~~~~~i~~~~  105 (426)
T d1hzua2          42 GQIALVDGDS----KKIVKVI--DTGYAVHISRMSASGRYLLVIG----------RDARIDMIDLWAKEPTKVAEIKIGI  105 (426)
T ss_dssp             TEEEEEETTT----CSEEEEE--ECCSSEEEEEECTTSCEEEEEE----------TTSEEEEEETTSSSCEEEEEEECCS
T ss_pred             CEEEEEECCC----CcEEEEE--eCCCCeeEEEECCCCCEEEEEe----------CCCCEEEEEccCCceeEEEEEeCCC
Confidence            4789999988    8876533  3444578899999999986542          22578889998887543321111 0


Q ss_pred             cccceeeeeEEecCCcEEEEee
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTI  105 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~  105 (751)
                      .....+.+++|||||++|+...
T Consensus       106 ~~~~~~~s~~~spDG~~l~v~~  127 (426)
T d1hzua2         106 EARSVESSKFKGYEDRYTIAGA  127 (426)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEE
T ss_pred             CCcceEEeeeecCCCCEEEEee
Confidence            1111234678899999988764


No 81 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.50  E-value=5.6e-12  Score=125.22  Aligned_cols=237  Identities=11%  Similarity=0.075  Sum_probs=142.9

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .+...+|||||++||..+          ....|.++++++++..+......   ...+..++|+|||+.++....     
T Consensus        14 ~V~~l~~s~dg~~l~s~s----------~Dg~v~vWd~~~~~~~~~~~~~h---~~~v~~v~~~~~g~~~~~~~d-----   75 (299)
T d1nr0a2          14 AITALSSSADGKTLFSAD----------AEGHINSWDISTGISNRVFPDVH---ATMITGIKTTSKGDLFTVSWD-----   75 (299)
T ss_dssp             CEEEEEECTTSSEEEEEE----------TTSCEEEEETTTCCEEECSSCSC---SSCEEEEEECTTSCEEEEETT-----
T ss_pred             CcEEEEECCCCCEEEEEc----------CCCeEEEEECCCCcEEEEEcCCC---CCcEEEEEeeccceeecccce-----
Confidence            588899999999998753          33567888998888665543221   113678999999986554421     


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-Cc---eecCC--CceEEeeeeCCC
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TA---KDFGT--PAVYTAVEPSPD  185 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~---~~lt~--~~~~~~~~~SpD  185 (751)
                                                                   ..+.+++..+ ..   ..+..  ...+..+.|+||
T Consensus        76 ---------------------------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  110 (299)
T d1nr0a2          76 ---------------------------------------------DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD  110 (299)
T ss_dssp             ---------------------------------------------TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTT
T ss_pred             ---------------------------------------------eeEEEeccCCccccccccccccccccccccccccc
Confidence                                                         3556666633 11   11111  145667899999


Q ss_pred             CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccC
Q 004475          186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR  265 (751)
Q Consensus       186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~  265 (751)
                      |+.++.....              .+.+|+..... +...               ......++|+||++. ++...    
T Consensus       111 g~~~~~~~~~--------------~i~~~~~~~~~-~~~~---------------~~~~~~~~~s~~~~~-l~~g~----  155 (299)
T d1nr0a2         111 GDIAVAACYK--------------HIAIYSHGKLT-EVPI---------------SYNSSCVALSNDKQF-VAVGG----  155 (299)
T ss_dssp             SSCEEEEESS--------------EEEEEETTEEE-EEEC---------------SSCEEEEEECTTSCE-EEEEE----
T ss_pred             cccccccccc--------------ccccccccccc-cccc---------------ccccccccccccccc-ccccc----
Confidence            9987765332              46677643221 1110               012346899999997 55533    


Q ss_pred             CCCccccCcccceeeccCCCCCCCCceEe--EeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeee
Q 004475          266 GDANVEVSPRDIIYTQPAEPAEGEKPEIL--HKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD  342 (751)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l--~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~  342 (751)
                              ..+.|.+++++   +.....+  ......+. +.|+|+++.|+....    ...|++.+..++ .....+..
T Consensus       156 --------~dg~i~~~d~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~~~~~~~~-~~~~~~~~  219 (299)
T d1nr0a2         156 --------QDSKVHVYKLS---GASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ----SRKVIPYSVANN-FELAHTNS  219 (299)
T ss_dssp             --------TTSEEEEEEEE---TTEEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEEGGGT-TEESCCCC
T ss_pred             --------ccccccccccc---ccccccccccccccccccccccccccccccccc----cccccccccccc-cccccccc
Confidence                    23578888875   3333222  23355667 999999999877552    235666666553 11111111


Q ss_pred             --cccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475          343 --RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI  409 (751)
Q Consensus       343 --~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l  409 (751)
                        .....+..      ++|+|||++|+..+.+                     ..|++||+.+++...+
T Consensus       220 ~~~h~~~v~~------l~~s~~~~~l~sgs~d---------------------g~i~iwd~~~~~~~~~  261 (299)
T d1nr0a2         220 WTFHTAKVAC------VSWSPDNVRLATGSLD---------------------NSVIVWNMNKPSDHPI  261 (299)
T ss_dssp             CCCCSSCEEE------EEECTTSSEEEEEETT---------------------SCEEEEETTCTTSCCE
T ss_pred             cccccccccc------ccccccccceEEEcCC---------------------CEEEEEECCCCCcceE
Confidence              11111222      7899999999887732                     2688999987765443


No 82 
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.49  E-value=1.8e-12  Score=133.53  Aligned_cols=232  Identities=14%  Similarity=0.076  Sum_probs=131.0

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .+...+|||||+.||+..          ....|.++++++++..++.....+  ...+..++|||||++|+..+.+    
T Consensus         9 pIt~~~~s~dg~~la~~~----------~~~~i~iw~~~~~~~~~~~~l~gH--~~~V~~l~fsp~~~~l~s~s~D----   72 (371)
T d1k8kc_           9 PISCHAWNKDRTQIAICP----------NNHEVHIYEKSGNKWVQVHELKEH--NGQVTGVDWAPDSNRIVTCGTD----   72 (371)
T ss_dssp             CCCEEEECTTSSEEEEEC----------SSSEEEEEEEETTEEEEEEEEECC--SSCEEEEEEETTTTEEEEEETT----
T ss_pred             CeEEEEECCCCCEEEEEe----------CCCEEEEEECCCCCEEEEEEecCC--CCCEEEEEECCCCCEEEEEECC----
Confidence            478899999999999853          335788888878765544321211  1147899999999998876432    


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecCCC-ceEEeeeeCCCC
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPSPDQ  186 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt~~-~~~~~~~~SpDG  186 (751)
                                                                   ..|.++++ +++.   ..+..+ ..+..+.|+|||
T Consensus        73 ---------------------------------------------~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~  107 (371)
T d1k8kc_          73 ---------------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE  107 (371)
T ss_dssp             ---------------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS
T ss_pred             ---------------------------------------------CeEEEEeeccccccccccccccccccccccccccc
Confidence                                                         35666666 4422   222333 678899999999


Q ss_pred             ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475          187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG  266 (751)
Q Consensus       187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~  266 (751)
                      ++|+..+.++             .+.+|+.+...........        .......+..++|+|||+. |+..+ .+  
T Consensus       108 ~~l~~~s~d~-------------~i~i~~~~~~~~~~~~~~~--------~~~~~~~v~~v~~~p~~~~-l~s~s-~D--  162 (371)
T d1k8kc_         108 KKFAVGSGSR-------------VISICYFEQENDWWVCKHI--------KKPIRSTVLSLDWHPNSVL-LAAGS-CD--  162 (371)
T ss_dssp             SEEEEEETTS-------------SEEEEEEETTTTEEEEEEE--------CTTCCSCEEEEEECTTSSE-EEEEE-TT--
T ss_pred             ccceeecccC-------------cceeeeeeccccccccccc--------ccccccccccccccccccc-eeccc-cC--
Confidence            9998875442             3445544332211110000        0111223567899999997 55433 11  


Q ss_pred             CCccccCcccceeeccCCCCC-------------CCCceEeE---eeceeEE-EEEecCCceEEEeeeecccceeEEEec
Q 004475          267 DANVEVSPRDIIYTQPAEPAE-------------GEKPEILH---KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVC  329 (751)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~l~---~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~  329 (751)
                               +.+.+++.....             ......+.   .....+. ++|+|||+.|+..+.    ...|.+.|
T Consensus       163 ---------~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~----d~~i~iwd  229 (371)
T d1k8kc_         163 ---------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLAD  229 (371)
T ss_dssp             ---------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEE
T ss_pred             ---------cEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccccccccc----CCcceEEe
Confidence                     233333321000             00011122   2334456 899999999887652    23566667


Q ss_pred             CCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          330 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       330 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      ...+  ............+..      ++|+|||+.|+...
T Consensus       230 ~~~~--~~~~~~~~~~~~v~s------~~fs~d~~~la~g~  262 (371)
T d1k8kc_         230 ADKK--MAVATLASETLPLLA------VTFITESSLVAAGH  262 (371)
T ss_dssp             GGGT--TEEEEEECSSCCEEE------EEEEETTEEEEEET
T ss_pred             eecc--cceeeeeccccccee------eeecCCCCEEEEEc
Confidence            6664  222222222222222      78999998776533


No 83 
>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]}
Probab=99.49  E-value=9.4e-13  Score=129.16  Aligned_cols=210  Identities=14%  Similarity=0.086  Sum_probs=122.9

Q ss_pred             ceEEEEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH----hCCe
Q 004475          480 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF  555 (751)
Q Consensus       480 ~~e~i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~G~  555 (751)
                      ..++++++..++ +..+.+|+|+++++++  ++|+|+++||++....+.        .............+.    ...+
T Consensus        26 ~v~~~~~~~~~~-~r~~~vylP~~y~~~k--~yPvl~~lhG~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~   94 (273)
T d1wb4a1          26 RIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENENTI--------FSNDVKLQNILDHAIMNGELEPL   94 (273)
T ss_dssp             EEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCCTTST--------TSTTTCHHHHHHHHHHHTSSCCE
T ss_pred             eEEEEEEecCCC-eEEEEEEeCCCCCCCC--CceEEEEEeCCCCCcchh--------hhhccchhHHHHhhhhhhccCCc
Confidence            578888887666 5799999999987654  599999999986321110        001110111111222    2467


Q ss_pred             EEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH---------HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCce
Q 004475          556 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE---------VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF  626 (751)
Q Consensus       556 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~---------l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~  626 (751)
                      .|+.++..+..+.+.     .+.....++....++.         +..+..+|+++++++|+|+||++|+.+|.++|++|
T Consensus        95 ~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f  169 (273)
T d1wb4a1          95 IVVTPTFNGGNCTAQ-----NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYV  169 (273)
T ss_dssp             EEEECCSCSTTCCTT-----THHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTC
T ss_pred             eeeccccCCCCCccc-----cchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcc
Confidence            888755533333222     2222223322222221         12223368899999999999999999999999999


Q ss_pred             eEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHH-----
Q 004475          627 CCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK-----  701 (751)
Q Consensus       627 ~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~-----  701 (751)
                      +++++++|.+........      ..........    .........++++.+|+.|..    ........+.+.     
T Consensus       170 ~a~~~~sg~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~  235 (273)
T d1wb4a1         170 AYFMPLSGDYWYGNSPQD------KANSIAEAIN----RSGLSKREYFVFAATGSEDIA----YANMNPQIEAMKALPHF  235 (273)
T ss_dssp             CEEEEESCCCCBSSSHHH------HHHHHHHHHH----HHTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHTSTTC
T ss_pred             eEEEEeCcccccCCCccc------ccccchhhhh----hhhhcccceEEEEecCCCCcc----cccchhHHHHHHHHHHH
Confidence            999999997643221100      0000000000    112233345678888888765    344444444443     


Q ss_pred             -----hCCCcEEEEEeCCCCCcC
Q 004475          702 -----GHGALSRLVLLPFEHHVY  719 (751)
Q Consensus       702 -----~~~~~~~~~~~~~~~H~~  719 (751)
                           ..+..+.+.++++++|.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~ggH~w  258 (273)
T d1wb4a1         236 DYTSDFSKGNFYFLVAPGATHWW  258 (273)
T ss_dssp             CBBSCTTTCCEEEEEETTCCSSH
T ss_pred             HHHHHhcCCCEEEEEECCCccCH
Confidence                 234578899999999974


No 84 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.49  E-value=6e-12  Score=131.92  Aligned_cols=206  Identities=7%  Similarity=-0.057  Sum_probs=124.5

Q ss_pred             cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475           34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP  113 (751)
Q Consensus        34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~  113 (751)
                      ..+....|.+.+.++..        ...+.|.++|+++++...-.....     .+..++|||||++|+..+.+      
T Consensus        22 ~~~~~~~~~~~~~~v~~--------~d~g~v~v~D~~t~~v~~~~~~g~-----~~~~v~fSpDG~~l~~~s~d------   82 (432)
T d1qksa2          22 TQQMNDWDLENLFSVTL--------RDAGQIALIDGSTYEIKTVLDTGY-----AVHISRLSASGRYLFVIGRD------   82 (432)
T ss_dssp             SSCCSCCCGGGEEEEEE--------TTTTEEEEEETTTCCEEEEEECSS-----CEEEEEECTTSCEEEEEETT------
T ss_pred             CceeecCCCCcEEEEEE--------cCCCEEEEEECCCCcEEEEEeCCC-----CeeEEEECCCCCEEEEEcCC------
Confidence            34566777777877664        455789999999998655433222     36788999999999876432      


Q ss_pred             CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc---eecC---CC-ceEEeeeeCCC
Q 004475          114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFG---TP-AVYTAVEPSPD  185 (751)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~---~~lt---~~-~~~~~~~~SpD  185 (751)
                                                                 ..+.++|+ +++.   .++.   .+ .....+.||||
T Consensus        83 -------------------------------------------g~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpD  119 (432)
T d1qksa2          83 -------------------------------------------GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWE  119 (432)
T ss_dssp             -------------------------------------------SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCT
T ss_pred             -------------------------------------------CCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCC
Confidence                                                       36777887 5532   2222   12 44557789999


Q ss_pred             CceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccC
Q 004475          186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR  265 (751)
Q Consensus       186 G~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~  265 (751)
                      |++|+++...            ...+.+||.++++................+ ........+.+||||+. ++++.    
T Consensus       120 G~~l~vs~~~------------~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~s~dg~~-~~vs~----  181 (432)
T d1qksa2         120 DKYAIAGAYW------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEY-HPEPRVAAILASHYRPE-FIVNV----  181 (432)
T ss_dssp             TTEEEEEEEE------------TTEEEEEETTTCCEEEEEECCEECTTTCCE-ESCCCEEEEEECSSSSE-EEEEE----
T ss_pred             CCEEEEEcCC------------CCeEEEEeCccccceeeeccCCccccceec-cCCCceeEEEECCCCCE-EEEEE----
Confidence            9999886554            346889999987765543332111100000 00111235678888887 44432    


Q ss_pred             CCCccccCcccceeeccCCCCCCCCceEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475          266 GDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                             ...+.+.+++..   ......+.  ....... +.++|||++++.+...   ...+..++.++
T Consensus       182 -------~~~~~i~~~d~~---~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~---~~~v~v~d~~~  238 (432)
T d1qksa2         182 -------KETGKILLVDYT---DLNNLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKE  238 (432)
T ss_dssp             -------TTTTEEEEEETT---CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTT
T ss_pred             -------ccCCeEEEEEcc---CCCcceEEEEcccCccccceECCCCCEEEEeccc---cceEEEeeccc
Confidence                   134578888775   22222222  1222344 8999999988776632   23455556555


No 85 
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.48  E-value=5.3e-12  Score=127.41  Aligned_cols=292  Identities=12%  Similarity=-0.005  Sum_probs=159.3

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCC-cccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD   82 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~   82 (751)
                      .-+|+++|+.+    ++......++. +......+|||||++|+.+.         .....|+++|+++++...-.....
T Consensus        10 d~~v~v~D~~s----~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~---------~~~~~v~v~D~~t~~~~~~~~~~~   76 (337)
T d1pbyb_          10 PDKLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------NKSESLVKIDLVTGETLGRIDLST   76 (337)
T ss_dssp             TTEEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------TTTTEEEEEETTTCCEEEEEECCB
T ss_pred             CCEEEEEECCC----CeEEEEEECCCCCCCccEEEECCCCCEEEEEE---------CCCCeEEEEECCCCcEEEEEecCC
Confidence            45899999988    87665432333 33567899999999886643         344789999999988654322221


Q ss_pred             cc-ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475           83 IC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL  161 (751)
Q Consensus        83 ~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  161 (751)
                      .. .......++|||||++++...........                                     ........+.+
T Consensus        77 ~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~  119 (337)
T d1pbyb_          77 PEERVKSLFGAALSPDGKTLAIYESPVRLELT-------------------------------------HFEVQPTRVAL  119 (337)
T ss_dssp             TTEEEECTTCEEECTTSSEEEEEEEEEEECSS-------------------------------------CEEECCCEEEE
T ss_pred             CcccccceeeEEEcCCCcEEEEeecCCcceee-------------------------------------eccccccceee
Confidence            11 01123478999999999877432111100                                     00001146677


Q ss_pred             EcC-CCCc-eecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475          162 GSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS  239 (751)
Q Consensus       162 ~~~-~G~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~  239 (751)
                      ++. +++. +.+........++|||||++++...               .+..+||..+++..........         
T Consensus       120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~~~~~d~~~~~~~~~~~~~~~---------  175 (337)
T d1pbyb_         120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQSW---------  175 (337)
T ss_dssp             EETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTTT---------
T ss_pred             ccccCCeEEEeccccCCceEEEEcCCCCEEEEEc---------------CCcceeeeecCcEEEEeecCCc---------
Confidence            777 5533 3333335566789999999998763               2356788876654332211110         


Q ss_pred             ccCCCceeeeecCCCce---------EEE--EEeccCCCCccccCcccceeeccCCCCCCCCceE--eEeeceeEE-EEE
Q 004475          240 VREGMRSISWRADKPST---------LYW--VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI--LHKLDLRFS-VSW  305 (751)
Q Consensus       240 ~~~~~~~~~~spdG~~~---------i~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--l~~~~~~~~-~~~  305 (751)
                          .....++|++..+         ...  ..................+++++..   .+....  ......... ..+
T Consensus       176 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  248 (337)
T d1pbyb_         176 ----EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE---TGEMAMREVRIMDVFYFSTAV  248 (337)
T ss_dssp             ----TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT---TCCEEEEEEEECSSCEEEEEE
T ss_pred             ----cccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcC---CCcEEEEEecCCCcceEEEEe
Confidence                0111233333220         111  1100001111111122356666664   222222  222233344 788


Q ss_pred             ecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccC
Q 004475          306 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR  385 (751)
Q Consensus       306 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~  385 (751)
                      +|+++.++...      ..|.++|+.++  ......... .....      ++|||||++|+....              
T Consensus       249 ~~~~~~~~~~~------~~i~v~d~~~~--~~~~~~~~~-~~~~~------~~~s~dG~~l~v~~~--------------  299 (337)
T d1pbyb_         249 NPAKTRAFGAY------NVLESFDLEKN--ASIKRVPLP-HSYYS------VNVSTDGSTVWLGGA--------------  299 (337)
T ss_dssp             CTTSSEEEEEE------SEEEEEETTTT--EEEEEEECS-SCCCE------EEECTTSCEEEEESB--------------
T ss_pred             cccceEEEEcc------ccEEEEECCCC--cEEEEEcCC-CCEEE------EEECCCCCEEEEEeC--------------
Confidence            89999775432      46778888875  222222211 11111      889999999987652              


Q ss_pred             CCCCCCCCceeEEEecCCCceeEEeec
Q 004475          386 GFTPEGNIPFLDLFDINTGSKERIWES  412 (751)
Q Consensus       386 ~~~~~~~~~~l~~~d~~~g~~~~l~~~  412 (751)
                             ...|.+||+++++.......
T Consensus       300 -------~~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         300 -------LGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             -------SSEEEEEETTTCCEEEEEEC
T ss_pred             -------CCcEEEEECCCCcEEEEEEC
Confidence                   23689999999877544443


No 86 
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.47  E-value=6.9e-12  Score=126.52  Aligned_cols=231  Identities=10%  Similarity=0.028  Sum_probs=112.7

Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP  254 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~  254 (751)
                      .....++|||||++|++....            ...+..++.+...........          .....+..+.++|||+
T Consensus        83 ~~p~~l~~spDg~~l~v~~~~------------~~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~v~~s~d~~  140 (333)
T d1ri6a_          83 GSLTHISTDHQGQFVFVGSYN------------AGNVSVTRLEDGLPVGVVDVV----------EGLDGCHSANISPDNR  140 (333)
T ss_dssp             SCCSEEEECTTSSEEEEEETT------------TTEEEEEEEETTEEEEEEEEE----------CCCTTBCCCEECTTSS
T ss_pred             CCceEEEEcCCCCEEeecccC------------CCceeeeccccccceeccccc----------CCCccceEEEeeecce
Confidence            345578999999999887543            224555555443332221111          1112345779999999


Q ss_pred             ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe----Eee-ceeEE-EEEecCCceEEEeeeecccceeEEEe
Q 004475          255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL----HKL-DLRFS-VSWCDDSLALVNETWYKTSQTRTWLV  328 (751)
Q Consensus       255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l----~~~-~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~  328 (751)
                      + ++....           ....+.+++.... .......    ... ..... +.|++++..++.... ......++.+
T Consensus       141 ~-~~~~~~-----------~~~~i~~~~~~~~-~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~-~~~~~~v~~~  206 (333)
T d1ri6a_         141 T-LWVPAL-----------KQDRICLFTVSDD-GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE-LNSSVDVWEL  206 (333)
T ss_dssp             E-EEEEEG-----------GGTEEEEEEECTT-SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET-TTTEEEEEES
T ss_pred             e-eecccc-----------ccceeeEEEeccC-CcceeeeceeeeeecCCCccEEEEeccceeEEeecc-ccCceEEEee
Confidence            8 555431           1234555555311 1111111    111 11223 789999998765542 2233456665


Q ss_pred             cCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeE
Q 004475          329 CPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER  408 (751)
Q Consensus       329 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  408 (751)
                      +...........................+++++||++++.....                  .....++.++..++....
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~  268 (333)
T d1ri6a_         207 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT------------------ASLITVFSVSEDGSVLSK  268 (333)
T ss_dssp             SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT------------------TTEEEEEEECTTSCCEEE
T ss_pred             cccccceeeeeeeeeeecCCCccccceeEEEecccCceeeeccc------------------CCeEEEEEEcCCCCEEEE
Confidence            55442111111110000000000111126789999988776621                  111233333333332222


Q ss_pred             EeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEeecCC
Q 004475          409 IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFP  470 (751)
Q Consensus       409 l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~  470 (751)
                      ......          ...+..++|||||++|+... .....-.+|.+|..+|+.+++...+
T Consensus       269 ~~~~~~----------~~~p~~~a~spDGk~l~va~-~~~~~v~v~~id~~tG~l~~~~~~~  319 (333)
T d1ri6a_         269 EGFQPT----------ETQPRGFNVDHSGKYLIAAG-QKSHHISVYEIVGEQGLLHEKGRYA  319 (333)
T ss_dssp             EEEEEC----------SSSCCCEEECTTSSEEEEEC-TTTCEEEEEEEETTTTEEEEEEEEE
T ss_pred             EEEeCC----------CCCeeEEEEeCCCCEEEEEE-CCCCeEEEEEEECCCCcEEEEEecc
Confidence            211110          11233478999999877553 3232335778898889887765543


No 87 
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}
Probab=99.47  E-value=6.6e-14  Score=136.03  Aligned_cols=195  Identities=13%  Similarity=0.051  Sum_probs=112.4

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE  591 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~  591 (751)
                      .|+||++||.+.           +...|    ..+...|++.||.|++   ++.+|+|.+...........   ..+...
T Consensus        16 ~P~ivllHG~~~-----------~~~~~----~~~~~~L~~~g~~vi~---~Dl~G~G~s~~~~~~~~~~~---~~~~~~   74 (264)
T d1r3da_          16 TPLVVLVHGLLG-----------SGADW----QPVLSHLARTQCAALT---LDLPGHGTNPERHCDNFAEA---VEMIEQ   74 (264)
T ss_dssp             BCEEEEECCTTC-----------CGGGG----HHHHHHHTTSSCEEEE---ECCTTCSSCC-------CHH---HHHHHH
T ss_pred             CCeEEEeCCCCC-----------CHHHH----HHHHHHHHhCCCEEEE---Eecccccccccccccccchh---hhhhhh
Confidence            689999999641           11112    2445577788999999   66678887644332211111   112222


Q ss_pred             HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCccc----------------c-------
Q 004475          592 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT----------------E-------  648 (751)
Q Consensus       592 l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~----------------~-------  648 (751)
                      +.........++.++||||||.+|+.++.++|+.+..++...+.............                .       
T Consensus        75 ~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (264)
T d1r3da_          75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLS  154 (264)
T ss_dssp             HHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             cccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            22222334578999999999999999999999887776655432211100000000                0       


Q ss_pred             ---cccch-----hh---------------H-HHHHhc------CcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHH
Q 004475          649 ---FRTLW-----EA---------------T-NVYIEM------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD  698 (751)
Q Consensus       649 ---~~~~~-----~~---------------~-~~~~~~------~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~  698 (751)
                         ....+     ..               . ......      .....+..+++|+++++|++|..++       .+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-------~~~~  227 (264)
T d1r3da_         155 DWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLAE  227 (264)
T ss_dssp             HHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHHH
T ss_pred             hhhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-------HHHh
Confidence               00000     00               0 000000      1122345788999999999996532       1222


Q ss_pred             HHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHHh
Q 004475          699 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC  740 (751)
Q Consensus       699 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l  740 (751)
                      .     ..+++++++++||... .+..+++.+.+.+||+..+
T Consensus       228 ~-----~~~~~~~i~~~gH~~~-~e~P~~~~~~i~~fl~~l~  263 (264)
T d1r3da_         228 S-----SGLSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII  263 (264)
T ss_dssp             H-----HCSEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred             c-----CCCeEEEECCCCCchH-HHCHHHHHHHHHHHHHhcc
Confidence            1     2458999999999876 5678889999999998753


No 88 
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.47  E-value=7.3e-13  Score=139.04  Aligned_cols=169  Identities=11%  Similarity=-0.052  Sum_probs=104.9

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-c
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-I   83 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-~   83 (751)
                      ..|.++|+.+    ++.....  +.+......+|||||++||..+          ....+.++++++++.+.+...+. .
T Consensus        42 g~v~v~D~~t----~~v~~~~--~~g~~~~~v~fSpDG~~l~~~s----------~dg~v~~~d~~t~~~~~~~~i~~~~  105 (432)
T d1qksa2          42 GQIALIDGST----YEIKTVL--DTGYAVHISRLSASGRYLFVIG----------RDGKVNMIDLWMKEPTTVAEIKIGS  105 (432)
T ss_dssp             TEEEEEETTT----CCEEEEE--ECSSCEEEEEECTTSCEEEEEE----------TTSEEEEEETTSSSCCEEEEEECCS
T ss_pred             CEEEEEECCC----CcEEEEE--eCCCCeeEEEECCCCCEEEEEc----------CCCCEEEEEeeCCCceEEEEEecCC
Confidence            4788999998    8887654  3444578899999999997653          22578888988876543321111 0


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                      .....+..+.|||||++|+.+...                                                ...+.++|
T Consensus       106 ~~~~~~~s~~~SpDG~~l~vs~~~------------------------------------------------~~~v~i~d  137 (432)
T d1qksa2         106 EARSIETSKMEGWEDKYAIAGAYW------------------------------------------------PPQYVIMD  137 (432)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEE------------------------------------------------TTEEEEEE
T ss_pred             CCCCeEEecccCCCCCEEEEEcCC------------------------------------------------CCeEEEEe
Confidence            001123456788999998776331                                                13567777


Q ss_pred             C-CCCceecC-------------CCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCC
Q 004475          164 L-DGTAKDFG-------------TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP  229 (751)
Q Consensus       164 ~-~G~~~~lt-------------~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~  229 (751)
                      . +++.....             .......+.+||||+.++++...            ...+++++..+.+...+...+.
T Consensus       138 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~------------~~~i~~~d~~~~~~~~~~~i~~  205 (432)
T d1qksa2         138 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLKTTEISA  205 (432)
T ss_dssp             TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEEEEEEEC
T ss_pred             CccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEcc------------CCeEEEEEccCCCcceEEEEcc
Confidence            7 55433221             11334567889999988876543            3467888887654333322111


Q ss_pred             CCCCCCccCCccCCCceeeeecCCCceEEEEE
Q 004475          230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVE  261 (751)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~  261 (751)
                                 ...+..+.|+|||++ ++.++
T Consensus       206 -----------g~~~~~~~~spdg~~-~~va~  225 (432)
T d1qksa2         206 -----------ERFLHDGGLDGSHRY-FITAA  225 (432)
T ss_dssp             -----------CSSEEEEEECTTSCE-EEEEE
T ss_pred             -----------cCccccceECCCCCE-EEEec
Confidence                       122457899999998 55543


No 89 
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.47  E-value=1.4e-12  Score=128.06  Aligned_cols=237  Identities=12%  Similarity=0.074  Sum_probs=138.6

Q ss_pred             CceEEEEEEcC-CCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEE
Q 004475          479 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV  557 (751)
Q Consensus       479 ~~~e~i~~~~~-~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v  557 (751)
                      .+++.+++++. -+..|...+.  .+       ++|+|+++||.+..         .....|... ......++++|++|
T Consensus         4 ~~v~~~~~~s~~~~r~i~~~~~--~~-------~~p~lyllhG~~g~---------~d~~~W~~~-~~~~~~~~~~~~iv   64 (280)
T d1dqza_           4 LPVEYLQVPSASMGRDIKVQFQ--GG-------GPHAVYLLDGLRAQ---------DDYNGWDIN-TPAFEEYYQSGLSV   64 (280)
T ss_dssp             SCEEEEEEEETTTTEEEEEEEE--CC-------SSSEEEECCCTTCC---------SSSCHHHHH-SCHHHHHTTSSSEE
T ss_pred             cEEEEEEEecccCCCcceEEee--CC-------CCCEEEECCCCCCC---------Cccchhhhc-chHHHHHHhCCcEE
Confidence            56777777764 3456666653  21       37999999995310         000111110 12334667899999


Q ss_pred             EEcCCCCCCCCCC---------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 004475          558 LAGPSIPIIGEGD---------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC  628 (751)
Q Consensus       558 ~~~~~~~~~g~g~---------~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~  628 (751)
                      ++++......+..         ......+...+++   +++.+|.++..+|+++++++|+||||++|+.+|+++|++|++
T Consensus        65 V~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~a  141 (280)
T d1dqza_          65 IMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTR---EMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPY  141 (280)
T ss_dssp             EEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHT---HHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSE
T ss_pred             EEECCCCCCcCccccCCcccccCCcchhHHHHHHH---HHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeE
Confidence            9966421111100         0112233444444   556666666668999999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCccCcc----------cccccch--hhHHHHHhcCcccccCCC---CCCEEEEEcCCCCCCCCC----
Q 004475          629 GIARSGSYNKTLTPFGFQ----------TEFRTLW--EATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGLF----  689 (751)
Q Consensus       629 ~v~~~~~~d~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~---~~P~li~~G~~D~~vp~~----  689 (751)
                      +++++|.++.........          ......+  .....+..+++...++++   .+++++.+|..|...+..    
T Consensus       142 v~s~SG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  221 (280)
T d1dqza_         142 AASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIP  221 (280)
T ss_dssp             EEEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHH
T ss_pred             EEEecCccCcccCcchhhhhhhHhhccCCCHhhccCCcchhhhhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccc
Confidence            999999876432211000          0000001  011234555666555443   478999999988654300    


Q ss_pred             --------hHHHHHHHHHHHhCCCcEEEE-EeCCCCCcCCccc-cHHHHHHHHHHHHH
Q 004475          690 --------PMQAERFFDALKGHGALSRLV-LLPFEHHVYAARE-NVMHVIWETDRWLQ  737 (751)
Q Consensus       690 --------~~~~~~~~~~l~~~~~~~~~~-~~~~~~H~~~~~~-~~~~~~~~~~~fl~  737 (751)
                              ......+.++|..++...... ..++++|.+.... ........+++||+
T Consensus       222 ~~~~e~~~~~~~~~~~~~l~~~g~~~~~~~~~~~GgH~W~~W~~~L~~~~p~~~~~l~  279 (280)
T d1dqza_         222 AKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVLN  279 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHcCCCeEEEEEcCCCccCchHHHHHHHHHhHHHHHHhc
Confidence                    244667888888887654444 4456789853221 12233456666664


No 90 
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.46  E-value=9.1e-12  Score=126.98  Aligned_cols=278  Identities=12%  Similarity=-0.006  Sum_probs=153.3

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-   82 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-   82 (751)
                      ...||++|+.+    |+.....  +.+ ....++|||||++|+++...............|+++|+.+++......... 
T Consensus        27 ~~~v~v~D~~t----g~~~~~~--~~g-~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~   99 (355)
T d2bbkh_          27 VTQQFVIDGEA----GRVIGMI--DGG-FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA   99 (355)
T ss_dssp             SEEEEEEETTT----TEEEEEE--EEC-SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             cCeEEEEECCC----CcEEEEE--ECC-CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCc
Confidence            34699999988    8765533  333 345789999999999876422111111334689999999988654322111 


Q ss_pred             --ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475           83 --ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV  160 (751)
Q Consensus        83 --~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  160 (751)
                        .........++|||||+++++......                                               ..+.
T Consensus       100 ~~~~~~~~~~~~~~s~dg~~~~v~~~~~~-----------------------------------------------~~~~  132 (355)
T d2bbkh_         100 PRFLVGTYPWMTSLTPDGKTLLFYQFSPA-----------------------------------------------PAVG  132 (355)
T ss_dssp             CCCCBSCCGGGEEECTTSSEEEEEECSSS-----------------------------------------------CEEE
T ss_pred             ceeecCCCCceEEEecCCCeeEEecCCCC-----------------------------------------------ceee
Confidence              111111246799999999988743211                                               2455


Q ss_pred             EEcC-CCCc-eecCCC--------ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475          161 LGSL-DGTA-KDFGTP--------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA  230 (751)
Q Consensus       161 ~~~~-~G~~-~~lt~~--------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~  230 (751)
                      +++. +++. +.+..+        .....+.+++||+.+++.....            ..+.+.+..+.....       
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~------------~~~~~~~~~~~~~~~-------  193 (355)
T d2bbkh_         133 VVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE------------GTPEITHTEVFHPED-------  193 (355)
T ss_dssp             EEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSS------------SCCEEEECCCCSCTT-------
T ss_pred             eeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCC------------CeEEEEeccccccee-------
Confidence            5555 4422 222211        1223467899999887764332            122233333221110       


Q ss_pred             CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-------------e
Q 004475          231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-------------L  297 (751)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------------~  297 (751)
                                ...+....+++++.. +++..            ..+.++++++.   +.....+..             .
T Consensus       194 ----------~~~~~~~~~~~~~~~-~~~~~------------~~~~~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~  247 (355)
T d2bbkh_         194 ----------EFLINHPAYSQKAGR-LVWPT------------YTGKIHQIDLS---SGDAKFLPAVEALTEAERADGWR  247 (355)
T ss_dssp             ----------SCBCSCCEEETTTTE-EEEEB------------TTSEEEEEECT---TSSCEECCCEESSCHHHHHTTEE
T ss_pred             ----------cceeeeccccCCCCe-EEEec------------CCCeEEEEecC---CCcEEEEeccCCcccceEeeeee
Confidence                      001123466777766 55543            22456666654   222211110             1


Q ss_pred             ceeEE-EEEecCCceEEEeeeec------ccceeEEEecCCCCCCcceeeee-cccccccCCCCCCCeeeCCCCCEEEEe
Q 004475          298 DLRFS-VSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTSTGTNVIAK  369 (751)
Q Consensus       298 ~~~~~-~~~spdg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~spDG~~l~~~  369 (751)
                      ..... +++++|++.++......      .....|+++++.++ .....+.. .....         ++|||||+.+++.
T Consensus       248 p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~-~~~~~~~~~~~~~~---------~a~spDG~~~l~v  317 (355)
T d2bbkh_         248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG-ERLAKFEMGHEIDS---------INVSQDEKPLLYA  317 (355)
T ss_dssp             ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC-CEEEEEEEEEEECE---------EEECCSSSCEEEE
T ss_pred             ccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC-cEEEEecCCCCEEE---------EEEcCCCCeEEEE
Confidence            11223 78999999987765322      13357999998875 22222221 11112         8899999976665


Q ss_pred             eeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475          370 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI  409 (751)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l  409 (751)
                      +..                   ....|++||+++|+..+.
T Consensus       318 ~~~-------------------~d~~i~v~D~~tg~~~~~  338 (355)
T d2bbkh_         318 LST-------------------GDKTLYIHDAESGEELRS  338 (355)
T ss_dssp             EET-------------------TTTEEEEEETTTCCEEEE
T ss_pred             EEC-------------------CCCEEEEEECCCCCEEEE
Confidence            521                   234799999999987543


No 91 
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.46  E-value=5.8e-12  Score=129.40  Aligned_cols=314  Identities=7%  Similarity=-0.099  Sum_probs=169.6

Q ss_pred             ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCC
Q 004475           33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP  112 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~  112 (751)
                      ....+.+|||++.+.+.     .....+..+||++|.++++....+....      ...++|||||++|++........ 
T Consensus        22 ~~~~a~~~~~~~~~v~~-----~~~~~g~~~~~~~d~~~~~~~~~~~~~~------~~~~a~spDg~~i~~~~~~~~~~-   89 (368)
T d1mdah_          22 SCDHGPGAISRRSHITL-----PAYFAGTTENWVSCAGCGVTLGHSLGAF------LSLAVAGHSGSDFALASTSFARS-   89 (368)
T ss_dssp             CBCCCCCCCTTEEEEEE-----CTTTCSSEEEEEEETTTTEEEEEEEECT------TCEEEECTTSSCEEEEEEEETTT-
T ss_pred             ccccccCCCCcceeEEe-----eccCCCcceEEEEeCCCCcEEEEEeCCC------CCcceECCCCCEEEEEcccCccc-
Confidence            44556788888754432     1222566899999999998777654433      24679999999999874311100 


Q ss_pred             CCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce-ecC--CC------ceEEeeee
Q 004475          113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFG--TP------AVYTAVEP  182 (751)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt--~~------~~~~~~~~  182 (751)
                                                            ....+...|.++|. +++.. .+.  ..      .....++|
T Consensus        90 --------------------------------------~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~  131 (368)
T d1mdah_          90 --------------------------------------AKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN  131 (368)
T ss_dssp             --------------------------------------TSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred             --------------------------------------cccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEE
Confidence                                                  00002257899998 66432 221  11      12236889


Q ss_pred             CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475          183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA  262 (751)
Q Consensus       183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~  262 (751)
                      |||||+|++....            ...+.+||+.+++.......+.....     ........+.+++||+. +++...
T Consensus       132 SpDGk~l~va~~~------------~~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~Dg~~-~~~~~~  193 (368)
T d1mdah_         132 CASSACLLFFLFG------------SSAAAGLSVPGASDDQLTKSASCFHI-----HPGAAATHYLGSCPASL-AASDLA  193 (368)
T ss_dssp             CTTSSCEEEEECS------------SSCEEEEEETTTEEEEEEECSSCCCC-----EEEETTEEECCCCTTSC-EEEECC
T ss_pred             CCCCCEEEEEeCC------------CCeEEEEECCCCcEeEEeeccCcceE-----ccCCCceEEEEcCCCCE-EEEEec
Confidence            9999999987543            34688999998776554333322110     00112235677888876 444321


Q ss_pred             ccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeee
Q 004475          263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF  341 (751)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~  341 (751)
                      . .+         ..+.....+..   .     ....... ..+++++..++- .     ...++.++...+  ....+.
T Consensus       194 ~-~~---------~~~~~~~~~~~---~-----~~~~~~~~~~~~~~g~~~~~-~-----~~~v~~~~~~~~--~~~~~~  247 (368)
T d1mdah_         194 A-AP---------AAAGIVGAQCT---G-----AQNCSSQAAQANYPGMLVWA-V-----ASSILQGDIPAA--GATMKA  247 (368)
T ss_dssp             S-SC---------CCCEECCCCSC---T-----TSCBCSCCEEETTTTEEEEC-B-----SSCCEEEECCSS--CCEEEC
T ss_pred             C-Cc---------eeeeeeecccc---c-----ccccceeecccccCcEEEEe-c-----CCCEEEEeecCC--ceEEEe
Confidence            1 10         01111111000   0     0111122 466777764432 2     234556665553  222221


Q ss_pred             ecccc------cccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccch
Q 004475          342 DRVFE------NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE  415 (751)
Q Consensus       342 ~~~~~------~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~  415 (751)
                      .....      ..+...+...++++||++.+++.....            +.........|++||.++++....+.... 
T Consensus       248 ~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~------------~~~~~~~~~~v~v~D~~t~~~~~~~~~~~-  314 (368)
T d1mdah_         248 AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH------------SRSCLAAAENTSSVTASVGQTSGPISNGH-  314 (368)
T ss_dssp             CCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC------------SSCTTSCEEEEEEEESSSCCEEECCEEEE-
T ss_pred             ecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCC------------CceeecCCceEEEEECCCCcEeEEecCCC-
Confidence            11100      000001223377899998877765331            11112233579999999987543332211 


Q ss_pred             hhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475          416 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI  466 (751)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l  466 (751)
                                 ....++|||||+.++|......  ..|+++|+.+|+..+.
T Consensus       315 -----------~~~~~a~spDG~~~ly~s~~~~--~~v~v~D~~tgk~~~~  352 (368)
T d1mdah_         315 -----------DSDAIIAAQDGASDNYANSAGT--EVLDIYDAASDQDQSS  352 (368)
T ss_dssp             -----------EECEEEECCSSSCEEEEEETTT--TEEEEEESSSCEEEEE
T ss_pred             -----------ceeEEEECCCCCEEEEEEeCCC--CeEEEEECCCCCEEEE
Confidence                       1223689999998777654433  4799999999986653


No 92 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.44  E-value=3e-12  Score=129.80  Aligned_cols=293  Identities=11%  Similarity=-0.001  Sum_probs=155.6

Q ss_pred             eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475           36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK  115 (751)
Q Consensus        36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~  115 (751)
                      |++|+||++|+...          ...+|.++|+++++...-...+...   ....++|||||++|+.....        
T Consensus         2 ~a~~~~~~~l~~~~----------~~~~v~v~D~~t~~~~~t~~~~~~~---~p~~l~~spDG~~l~v~~~~--------   60 (346)
T d1jmxb_           2 PALKAGHEYMIVTN----------YPNNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNNH--------   60 (346)
T ss_dssp             CCCCTTCEEEEEEE----------TTTEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEETT--------
T ss_pred             ccCCCCCcEEEEEc----------CCCEEEEEECCCCCEEEEEEcCCCC---CcceEEECCCCCEEEEEECC--------
Confidence            79999999998863          3468999999998865432222110   24688999999998876321        


Q ss_pred             CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCce-ecC--CC-----ceEEeeeeCCCC
Q 004475          116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFG--TP-----AVYTAVEPSPDQ  186 (751)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt--~~-----~~~~~~~~SpDG  186 (751)
                                                              ...|+++|+ +++.. .+.  ..     .....++|||||
T Consensus        61 ----------------------------------------~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG  100 (346)
T d1jmxb_          61 ----------------------------------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG  100 (346)
T ss_dssp             ----------------------------------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred             ----------------------------------------CCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCC
Confidence                                                    146888888 66332 221  11     123478999999


Q ss_pred             ceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccC
Q 004475          187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR  265 (751)
Q Consensus       187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~  265 (751)
                      +++++........ ..........+.+++..+++... +...           ........+.+++|++.  +...    
T Consensus       101 ~~l~v~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~~----  162 (346)
T d1jmxb_         101 KEVYATVNPTQRL-NDHYVVKPPRLEVFSTADGLEAKPVRTF-----------PMPRQVYLMRAADDGSL--YVAG----  162 (346)
T ss_dssp             SEEEEEEEEEEEC-SSCEEECCCEEEEEEGGGGGGBCCSEEE-----------ECCSSCCCEEECTTSCE--EEES----
T ss_pred             CEEEEEecCCcce-eeeeccCcceEEEEecccceeeeEEEee-----------eccCceEEEEecCCCEE--EEeC----
Confidence            9998876542110 00011113456677776543221 1100           00112224456666653  3321    


Q ss_pred             CCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeee----------------------cccc
Q 004475          266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWY----------------------KTSQ  322 (751)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~----------------------~~~~  322 (751)
                                ..+.++++.   ............... ..++|++..++.....                      ....
T Consensus       163 ----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (346)
T d1jmxb_         163 ----------PDIYKMDVK---TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL  229 (346)
T ss_dssp             ----------SSEEEECTT---TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred             ----------CcceEEEcc---CCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCC
Confidence                      234444442   111111111111112 3455555543322100                      0112


Q ss_pred             eeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecC
Q 004475          323 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN  402 (751)
Q Consensus       323 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~  402 (751)
                      ..+..++..++... .............      ..+++++..+++....                      .+.+||.+
T Consensus       230 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~----------------------~v~v~d~~  280 (346)
T d1jmxb_         230 YGYLSVDLKTGKTH-TQEFADLTELYFT------GLRSPKDPNQIYGVLN----------------------RLAKYDLK  280 (346)
T ss_dssp             EEEEEEETTTCCEE-EEEEEECSSCEEE------EEECSSCTTEEEEEES----------------------EEEEEETT
T ss_pred             ceEEEEECCCCceE-EEEeecccceeEE------EEEeCCCCEEEEecCC----------------------eEEEEECC
Confidence            34666666664111 1111111111111      5678888888776622                      68889999


Q ss_pred             CCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475          403 TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ  465 (751)
Q Consensus       403 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~  465 (751)
                      +++.........            ....++|||||++|+... .   -..|.++|+.+++...
T Consensus       281 ~~~~~~~~~~~~------------~~~~va~s~DG~~l~v~~-~---d~~v~v~D~~t~~~i~  327 (346)
T d1jmxb_         281 QRKLIKAANLDH------------TYYCVAFDKKGDKLYLGG-T---FNDLAVFNPDTLEKVK  327 (346)
T ss_dssp             TTEEEEEEECSS------------CCCEEEECSSSSCEEEES-B---SSEEEEEETTTTEEEE
T ss_pred             CCcEEEEEcCCC------------CEEEEEEcCCCCEEEEEe-C---CCcEEEEECccCCEEE
Confidence            887654433221            122368999999887643 2   2579999999887543


No 93 
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.44  E-value=2.8e-11  Score=124.31  Aligned_cols=291  Identities=10%  Similarity=-0.061  Sum_probs=154.9

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ...||++|..+    |+.....  +.+ ....++|||||++|++................|+++|+.+++.......+..
T Consensus        46 ~~~v~v~D~~t----g~~~~~~--~~~-~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~  118 (373)
T d2madh_          46 IIQQWVLDAGS----GSILGHV--NGG-FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA  118 (373)
T ss_pred             CceEEEEECCC----CCEEEEE--eCC-CCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCc
Confidence            45799999988    8877543  333 2447899999999999765221111113346799999999987655433321


Q ss_pred             cc---cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475           84 CL---NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV  160 (751)
Q Consensus        84 ~~---~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  160 (751)
                      ..   ......+.|+|||+.+++......                                               ..+.
T Consensus       119 ~~~~~~~~~~~~~~s~dg~~~~v~~~~~~-----------------------------------------------~~~~  151 (373)
T d2madh_         119 PRFDVGPYSWMNANTPNNADLLFFQFAAG-----------------------------------------------PAVG  151 (373)
T ss_pred             ceeEeccCCCcEEEEeCCCcEEEEEEcCC-----------------------------------------------CceE
Confidence            10   011235789999999887643211                                               2333


Q ss_pred             EEcC-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCC
Q 004475          161 LGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS  239 (751)
Q Consensus       161 ~~~~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~  239 (751)
                      +++. +++....  ......+.++|||+.+++....            ...+.+|+..++.............      .
T Consensus       152 ~~~~~~~~~~~~--~~~~~~~~~s~~g~~~~v~~~~------------dg~~~~~~~~~~~~~~~~~~~~~~~------~  211 (373)
T d2madh_         152 LVVQGGSSDDQL--LSSPTCYHIHPGAPSTFYLLCA------------QGGLAKTDHAGGAAGAGLVGAMLTA------A  211 (373)
T ss_pred             EeeccCCeEEEE--eccceeEEEecCCCcEEEEEcC------------CCeEEEEEcCCceeeEEEeeecccc------C
Confidence            3444 2222111  1234467899999998776543            3457788887665443322111000      0


Q ss_pred             ccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCC----------CCCCCceEeEeeceeEE-EEEecC
Q 004475          240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEP----------AEGEKPEILHKLDLRFS-VSWCDD  308 (751)
Q Consensus       240 ~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~l~~~~~~~~-~~~spd  308 (751)
                      .......+.+++++..  ++..            ..+.+++++...          ........+........ ..+++|
T Consensus       212 ~~~~~~~~~~~~~~~~--~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  277 (373)
T d2madh_         212 QNLLTQPAQANKSGRI--VWPV------------YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS  277 (373)
T ss_pred             ccceeeeEEECCCceE--EEec------------CCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecC
Confidence            0001123344444432  2211            011222222210          00111111122223334 789999


Q ss_pred             CceEEEeeeec------ccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEE
Q 004475          309 SLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL  382 (751)
Q Consensus       309 g~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~  382 (751)
                      ++.+++.....      .....+++++..++  +........ ....      .++|||||+.+++....          
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~--~~~~~~~~~-~~~~------~~a~spDG~~~l~vt~~----------  338 (373)
T d2madh_         278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQISLG-HDVD------AISVAQDGGPDLYALSA----------  338 (373)
T ss_pred             CCeEEEecCCCceEEeecCCCeEEEEECCCC--cEEEEecCC-CCee------EEEECCCCCEEEEEEeC----------
Confidence            99887654211      23356888888775  222222111 1111      17899999987665521          


Q ss_pred             ccCCCCCCCCCceeEEEecCCCceeEEe
Q 004475          383 NGRGFTPEGNIPFLDLFDINTGSKERIW  410 (751)
Q Consensus       383 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~  410 (751)
                               ....|++||+.+|+.....
T Consensus       339 ---------~d~~v~v~D~~tg~~~~~~  357 (373)
T d2madh_         339 ---------GTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             ---------CCCeEEEEECCCCCEEEEE
Confidence                     2347999999999875443


No 94 
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.39  E-value=2.3e-10  Score=117.82  Aligned_cols=287  Identities=11%  Similarity=0.095  Sum_probs=159.9

Q ss_pred             ccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC--------------ccccceeeeeEEec
Q 004475           31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--------------ICLNAVFGSFVWVN   96 (751)
Q Consensus        31 ~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~--------------~~~~~~~~~~~wsp   96 (751)
                      ..+...+|||||++||...           ...|.++++.+++...-.....              ......+..++|||
T Consensus        63 ~~V~~l~fs~dg~~lasg~-----------d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~  131 (388)
T d1erja_          63 SVVCCVKFSNDGEYLATGC-----------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP  131 (388)
T ss_dssp             SCCCEEEECTTSSEEEEEC-----------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred             CcEEEEEECCCCCEEEEEe-----------CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECC
Confidence            3688999999999988731           2467778887776432211110              00111356789999


Q ss_pred             CCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC
Q 004475           97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP  174 (751)
Q Consensus        97 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~  174 (751)
                      ||++|+..+.+                                                 ..|.+++. .++ ...+..+
T Consensus       132 ~~~~l~s~~~d-------------------------------------------------g~v~i~~~~~~~~~~~~~~h  162 (388)
T d1erja_         132 DGKFLATGAED-------------------------------------------------RLIRIWDIENRKIVMILQGH  162 (388)
T ss_dssp             TSSEEEEEETT-------------------------------------------------SCEEEEETTTTEEEEEECCC
T ss_pred             CCCcceecccc-------------------------------------------------cccccccccccccccccccc
Confidence            99999877542                                                 35666676 553 3333333


Q ss_pred             -ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeee-cC
Q 004475          175 -AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR-AD  252 (751)
Q Consensus       175 -~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s-pd  252 (751)
                       ..+..+.|++++..++.....             ..+.+|+..+...........             ....+.++ +|
T Consensus       163 ~~~v~~~~~~~~~~~~~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~  216 (388)
T d1erja_         163 EQDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSIED-------------GVTTVAVSPGD  216 (388)
T ss_dssp             SSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECSS-------------CEEEEEECSTT
T ss_pred             cccccccccccccccccccccc-------------eeeeeeecccccccccccccc-------------ccccccccCCC
Confidence             678899999999998876543             357889988765443322211             11233444 46


Q ss_pred             CCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEe-------EeeceeEE-EEEecCCceEEEeeeeccccee
Q 004475          253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL-------HKLDLRFS-VSWCDDSLALVNETWYKTSQTR  324 (751)
Q Consensus       253 G~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l-------~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~  324 (751)
                      |+. |+...            ..+.|++++...  +.....+       ......+. +.|+|||+.|+..+.  +  ..
T Consensus       217 ~~~-l~~~~------------~d~~i~i~~~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~--d--~~  277 (388)
T d1erja_         217 GKY-IAAGS------------LDRAVRVWDSET--GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--D--RS  277 (388)
T ss_dssp             CCE-EEEEE------------TTSCEEEEETTT--CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--T--SE
T ss_pred             CCe-EEEEc------------CCCeEEEeeccc--CccceeeccccccccCCCCCEEEEEECCCCCEEEEEEC--C--Cc
Confidence            665 54433            224577777641  1111111       11234566 899999998876552  2  34


Q ss_pred             EEEecCCCCCCcce--------ee--eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCc
Q 004475          325 TWLVCPGSKDVAPR--------VL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP  394 (751)
Q Consensus       325 l~~~~~~~~~~~~~--------~l--~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (751)
                      |.+.++.+......        .+  .......+..      ++|+|||++|+..+.+                     .
T Consensus       278 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~sg~~d---------------------g  330 (388)
T d1erja_         278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYILSGSKD---------------------R  330 (388)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEE------EEECGGGCEEEEEETT---------------------S
T ss_pred             EEEEeccCCccccccccccccceeeecccccceEEE------EEECCCCCEEEEEeCC---------------------C
Confidence            55555544311100        00  0011111111      7899999998887732                     2


Q ss_pred             eeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEc
Q 004475          395 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW  458 (751)
Q Consensus       395 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~  458 (751)
                      .|++||+.+++....+.....    .+..+. ......|+||++.|+-. ...   +.|.++++
T Consensus       331 ~i~vwd~~~~~~~~~l~~H~~----~V~~~~-~~~~~~~spd~~~l~s~-s~D---g~I~iW~~  385 (388)
T d1erja_         331 GVLFWDKKSGNPLLMLQGHRN----SVISVA-VANGSSLGPEYNVFATG-SGD---CKARIWKY  385 (388)
T ss_dssp             EEEEEETTTCCEEEEEECCSS----CEEEEE-ECSSCTTCTTCEEEEEE-ETT---SEEEEEEE
T ss_pred             EEEEEECCCCcEEEEEeCCCC----CEEEEE-EecCcccCCCCCEEEEE-eCC---CEEEEEee
Confidence            788999998887555443221    122221 11224689999866643 332   34666664


No 95 
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.39  E-value=7.3e-11  Score=121.13  Aligned_cols=229  Identities=11%  Similarity=0.109  Sum_probs=124.5

Q ss_pred             eEEEEEcC-CCC---ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCC
Q 004475          157 AQLVLGSL-DGT---AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE  231 (751)
Q Consensus       157 ~~l~~~~~-~G~---~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~  231 (751)
                      ..|.++++ +++   ...+..+ ..+..++|||||++|+..+.+             ..+.+|+++++..+......   
T Consensus        29 ~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D-------------~~i~vWd~~~~~~~~~~~~~---   92 (371)
T d1k8kc_          29 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-------------RNAYVWTLKGRTWKPTLVIL---   92 (371)
T ss_dssp             SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-------------SCEEEEEEETTEEEEEEECC---
T ss_pred             CEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECC-------------CeEEEEeecccccccccccc---
Confidence            35777777 443   2334444 678999999999998876433             35889998766544332111   


Q ss_pred             CCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE----eeceeEE-EEEe
Q 004475          232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH----KLDLRFS-VSWC  306 (751)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~----~~~~~~~-~~~s  306 (751)
                             .....+..+.|+|||+. ++..+            ..+.+.+++.+.  ......+.    .....+. +.|+
T Consensus        93 -------~~~~~v~~i~~~p~~~~-l~~~s------------~d~~i~i~~~~~--~~~~~~~~~~~~~~~~~v~~v~~~  150 (371)
T d1k8kc_          93 -------RINRAARCVRWAPNEKK-FAVGS------------GSRVISICYFEQ--ENDWWVCKHIKKPIRSTVLSLDWH  150 (371)
T ss_dssp             -------CCSSCEEEEEECTTSSE-EEEEE------------TTSSEEEEEEET--TTTEEEEEEECTTCCSCEEEEEEC
T ss_pred             -------ccccccccccccccccc-ceeec------------ccCcceeeeeec--cccccccccccccccccccccccc
Confidence                   11233568899999998 55543            123455554431  11111111    1233456 8999


Q ss_pred             cCCceEEEeeeecccceeEEEecCCCCCCcc------------eeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecC
Q 004475          307 DDSLALVNETWYKTSQTRTWLVCPGSKDVAP------------RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN  374 (751)
Q Consensus       307 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~------------~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~  374 (751)
                      |||+.|+.++.  ++.-.+|...........            ..+.......    .....++|+|||+.|+..+.+  
T Consensus       151 p~~~~l~s~s~--D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~g~~l~s~~~d--  222 (371)
T d1k8kc_         151 PNSVLLAAGSC--DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC----GWVHGVCFSANGSRVAWVSHD--  222 (371)
T ss_dssp             TTSSEEEEEET--TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS----SCEEEEEECSSSSEEEEEETT--
T ss_pred             ccccceecccc--CcEEEEEeeccCccccccccccccccccceeeeeeccCcc----CcEEEEEeecccccccccccC--
Confidence            99999876652  233344443322110000            0111100000    000126799999999887732  


Q ss_pred             CcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEE
Q 004475          375 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH  454 (751)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~  454 (751)
                                         ..|.+||+.+++..........    .+.       .++|+||++.|+ .. . .....++
T Consensus       223 -------------------~~i~iwd~~~~~~~~~~~~~~~----~v~-------s~~fs~d~~~la-~g-~-d~~~~~~  269 (371)
T d1k8kc_         223 -------------------STVCLADADKKMAVATLASETL----PLL-------AVTFITESSLVA-AG-H-DCFPVLF  269 (371)
T ss_dssp             -------------------TEEEEEEGGGTTEEEEEECSSC----CEE-------EEEEEETTEEEE-EE-T-TSSCEEE
T ss_pred             -------------------CcceEEeeecccceeeeecccc----cce-------eeeecCCCCEEE-EE-c-CCceEEE
Confidence                               3688999987765433322111    011       257899986554 32 2 3344677


Q ss_pred             EEEcCCCcee
Q 004475          455 ILSWPLKKSS  464 (751)
Q Consensus       455 ~~~~~~g~~~  464 (751)
                      ..+...++..
T Consensus       270 ~~~~~~~~~~  279 (371)
T d1k8kc_         270 TYDSAAGKLS  279 (371)
T ss_dssp             EEETTTTEEE
T ss_pred             EeeCCCceEE
Confidence            7776555443


No 96 
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.38  E-value=2.3e-11  Score=120.67  Aligned_cols=252  Identities=12%  Similarity=0.088  Sum_probs=141.9

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ...|.+||+.+    |+..+...-.....+...+|+|||+.++.           .....+.+++..+.+........ .
T Consensus        33 Dg~v~vWd~~~----~~~~~~~~~~h~~~v~~v~~~~~g~~~~~-----------~~d~~v~~~~~~~~~~~~~~~~~-~   96 (299)
T d1nr0a2          33 EGHINSWDIST----GISNRVFPDVHATMITGIKTTSKGDLFTV-----------SWDDHLKVVPAGGSGVDSSKAVA-N   96 (299)
T ss_dssp             TSCEEEEETTT----CCEEECSSCSCSSCEEEEEECTTSCEEEE-----------ETTTEEEEECSSSSSSCTTSCCE-E
T ss_pred             CCeEEEEECCC----CcEEEEEcCCCCCcEEEEEeeccceeecc-----------cceeeEEEeccCCcccccccccc-c
Confidence            34689999988    88766542122335788999999976554           23356777776654322221110 0


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                      .....+..++|+|||+.++....                                                  ..+.+++
T Consensus        97 ~~~~~~~~~~~s~~g~~~~~~~~--------------------------------------------------~~i~~~~  126 (299)
T d1nr0a2          97 KLSSQPLGLAVSADGDIAVAACY--------------------------------------------------KHIAIYS  126 (299)
T ss_dssp             ECSSCEEEEEECTTSSCEEEEES--------------------------------------------------SEEEEEE
T ss_pred             ccccccccccccccccccccccc--------------------------------------------------ccccccc
Confidence            11112457899999998776532                                                  2344444


Q ss_pred             CCCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCC
Q 004475          164 LDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG  243 (751)
Q Consensus       164 ~~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~  243 (751)
                      . ++...+........++|+||+++|++...+             ..+.+||+++++...+....           ....
T Consensus       127 ~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-------------g~i~~~d~~~~~~~~~~~~~-----------~~~~  181 (299)
T d1nr0a2         127 H-GKLTEVPISYNSSCVALSNDKQFVAVGGQD-------------SKVHVYKLSGASVSEVKTIV-----------HPAE  181 (299)
T ss_dssp             T-TEEEEEECSSCEEEEEECTTSCEEEEEETT-------------SEEEEEEEETTEEEEEEEEE-----------CSSC
T ss_pred             c-cccccccccccccccccccccccccccccc-------------cccccccccccccccccccc-----------cccc
Confidence            3 222222222445678999999998875433             36889998876654332111           1123


Q ss_pred             CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC-CCCceEeEeeceeEE-EEEecCCceEEEeeeeccc
Q 004475          244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTS  321 (751)
Q Consensus       244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~  321 (751)
                      +..++|+|+|+. |+...            ..+.++++++.... -.....+......+. ++|+|+|+.|+....    
T Consensus       182 i~~~~~~~~~~~-l~~~~------------~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~----  244 (299)
T d1nr0a2         182 ITSVAFSNNGAF-LVATD------------QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL----  244 (299)
T ss_dssp             EEEEEECTTSSE-EEEEE------------TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEET----
T ss_pred             cccccccccccc-ccccc------------cccccccccccccccccccccccccccccccccccccccceEEEcC----
Confidence            568899999998 55543            23467777763100 001112223344566 899999999887652    


Q ss_pred             ceeEEEecCCCCCCcceeeeec-ccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          322 QTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       322 ~~~l~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      ...|.+.++.++.......... ....+.       ..++++++.|+..+
T Consensus       245 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~-------~~~~~~~~~l~s~s  287 (299)
T d1nr0a2         245 DNSVIVWNMNKPSDHPIIIKGAHAMSSVN-------SVIWLNETTIVSAG  287 (299)
T ss_dssp             TSCEEEEETTCTTSCCEEETTSSTTSCEE-------EEEEEETTEEEEEE
T ss_pred             CCEEEEEECCCCCcceEEEecCCCCCcEE-------EEEECCCCEEEEEe
Confidence            2356666666542222222111 111111       23557777777766


No 97 
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}
Probab=99.38  E-value=2.3e-14  Score=144.41  Aligned_cols=223  Identities=13%  Similarity=0.114  Sum_probs=124.9

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP  573 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~  573 (751)
                      +.+.++.|.+     +.+.| ||++||++..+..    ....++.    ....+..++++||.|++   .+.+|+|.+..
T Consensus        46 ~~v~~~~p~~-----~~~~P-vvllHG~~~~~~~----w~~~~~~----~~~~~~~~~~~Gy~V~~---~D~~G~G~S~~  108 (318)
T d1qlwa_          46 MYVRYQIPQR-----AKRYP-ITLIHGCCLTGMT----WETTPDG----RMGWDEYFLRKGYSTYV---IDQSGRGRSAT  108 (318)
T ss_dssp             EEEEEEEETT-----CCSSC-EEEECCTTCCGGG----GSSCTTS----CCCHHHHHHHTTCCEEE---EECTTSTTSCC
T ss_pred             EEEEEECCCC-----CCCCc-EEEECCCCCCcCc----cccCccc----chhHHHHHHhCCCEEEE---ecCCCCCCCCC
Confidence            5566677765     23466 6678998743211    1111111    22457788999999999   56668877754


Q ss_pred             CchhH--HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc-eeEEEEccCCCCCCC---CccCc--
Q 004475          574 NDRFV--EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL-FCCGIARSGSYNKTL---TPFGF--  645 (751)
Q Consensus       574 ~~~~~--~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~d~~~---~~~~~--  645 (751)
                      .....  .....++...++    .-.....++++.|||+||.++..++...+.. ....++..+......   .....  
T Consensus       109 ~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (318)
T d1qlwa_         109 DISAINAVKLGKAPASSLP----DLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVA  184 (318)
T ss_dssp             CCHHHHHHHTTSSCGGGSC----CCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHH
T ss_pred             ccccCCHHHHHHHHHHHHH----HHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHH
Confidence            33211  111111111111    1112234677889999998887776554322 111111111110000   00000  


Q ss_pred             -----------------ccccccchhhHHH-------------HHhcCcccccCCCCCCEEEEEcCCCCCCCCCh-----
Q 004475          646 -----------------QTEFRTLWEATNV-------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFP-----  690 (751)
Q Consensus       646 -----------------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~-----  690 (751)
                                       .......|.....             .....+......+++|+|++||++|.++|  .     
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p--~~~~~~  262 (318)
T d1qlwa_         185 NLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFP--RWAPRL  262 (318)
T ss_dssp             HHHHHHHHHTSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCT--TTHHHH
T ss_pred             HHHHHHhhhccccchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccC--hhhhHH
Confidence                             0000000000000             00112344556678999999999999987  4     


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeC-----CCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          691 MQAERFFDALKGHGALSRLVLLP-----FEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       691 ~~~~~~~~~l~~~~~~~~~~~~~-----~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      ..+..+++.+++++.++++..+|     |++|.++...+.+++.+.+.+||+++
T Consensus       263 ~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~  316 (318)
T d1qlwa_         263 KACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN  316 (318)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence            34556778889999999999977     56799876666789999999999986


No 98 
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37  E-value=1.9e-10  Score=114.09  Aligned_cols=269  Identities=11%  Similarity=0.059  Sum_probs=156.6

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .+...+|||||++||..+          ..+.|.++++.+++..........    .+..++|+|++..++......   
T Consensus        19 ~I~~l~~sp~~~~l~s~s----------~Dg~i~iWd~~~~~~~~~~~~h~~----~V~~~~~~~~~~~~~~~~~~~---   81 (317)
T d1vyhc1          19 PVTRVIFHPVFSVMVSAS----------EDATIKVWDYETGDFERTLKGHTD----SVQDISFDHSGKLLASCSADM---   81 (317)
T ss_dssp             CEEEEEECSSSSEEEEEE----------SSSCEEEEETTTCCCCEEECCCSS----CEEEEEECTTSSEEEEEETTS---
T ss_pred             CeEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCCEEEEEeCCCC----cEEEEeeeccccccccccccc---
Confidence            588999999999988753          236788889888875544332221    477899999999988774321   


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceecCCC-ceEEeeeeCCCCce
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY  188 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~lt~~-~~~~~~~~SpDG~~  188 (751)
                                                                    .+...+. ..+ ...+... .......|+|+++.
T Consensus        82 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (317)
T d1vyhc1          82 ----------------------------------------------TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH  115 (317)
T ss_dssp             ----------------------------------------------CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred             ----------------------------------------------ccccccccccccccccccccccceeeeccCCCce
Confidence                                                          1122222 222 2222222 56678899999999


Q ss_pred             EEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCC
Q 004475          189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA  268 (751)
Q Consensus       189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~  268 (751)
                      |+....+             ..+.+|++.++.......            .....+..+.|+|||+. ++...       
T Consensus       116 ~~~~~~d-------------~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-l~~~~-------  162 (317)
T d1vyhc1         116 IVSASRD-------------KTIKMWEVQTGYCVKTFT------------GHREWVRMVRPNQDGTL-IASCS-------  162 (317)
T ss_dssp             EEEEETT-------------SEEEEEETTTCCEEEEEE------------CCSSCEEEEEECTTSSE-EEEEE-------
T ss_pred             EEeeccC-------------cceeEeecccceeeeEEc------------cCCCcceeeecccCCCE-EEEEe-------
Confidence            8876443             357789987654332211            11123457899999997 55443       


Q ss_pred             ccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeee----------------ecccceeEEEecCC
Q 004475          269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETW----------------YKTSQTRTWLVCPG  331 (751)
Q Consensus       269 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~----------------~~~~~~~l~~~~~~  331 (751)
                           ..+.+++++...  ......+......+. +.|+|++..+.....                .......|.+.+..
T Consensus       163 -----~d~~v~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~  235 (317)
T d1vyhc1         163 -----NDQTVRVWVVAT--KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS  235 (317)
T ss_dssp             -----TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred             -----CCCeEEEEeecc--ceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECC
Confidence                 234677777641  112223333344455 777777653221110                00122456666766


Q ss_pred             CCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475          332 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE  411 (751)
Q Consensus       332 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~  411 (751)
                      ++  ............+..      ++|+|+|+.|+..+.+                     ..|.+||+.+++....+.
T Consensus       236 ~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~s~~~d---------------------g~i~iwd~~~~~~~~~~~  286 (317)
T d1vyhc1         236 TG--MCLMTLVGHDNWVRG------VLFHSGGKFILSCADD---------------------KTLRVWDYKNKRCMKTLN  286 (317)
T ss_dssp             TT--EEEEEEECCSSCEEE------EEECSSSSCEEEEETT---------------------TEEEEECCTTSCCCEEEE
T ss_pred             CC--cEEEEEeCCCCCEEE------EEECCCCCEEEEEECC---------------------CeEEEEECCCCcEEEEEc
Confidence            64  222222222222222      7899999998887732                     378899998887655544


Q ss_pred             ccchhhhhceeeeecCCcceeeccCCCEEEEE
Q 004475          412 SNREKYFETAVALVFGQGEEDINLNQLKILTS  443 (751)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~  443 (751)
                      ....    .+..       ++||||++.|+..
T Consensus       287 ~h~~----~V~~-------~~~s~~~~~l~s~  307 (317)
T d1vyhc1         287 AHEH----FVTS-------LDFHKTAPYVVTG  307 (317)
T ss_dssp             CCSS----CEEE-------EEECSSSSCEEEE
T ss_pred             CCCC----CEEE-------EEEcCCCCEEEEE
Confidence            3211    1222       4799999877743


No 99 
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.36  E-value=3.9e-11  Score=121.37  Aligned_cols=291  Identities=10%  Similarity=-0.031  Sum_probs=157.1

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ...|.++|+.+    ++......++.+......+|||||++++...         .....|+++|+.+++..........
T Consensus        17 ~~~v~v~D~~t----~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~---------~~~~~v~~~d~~t~~~~~~~~~~~~   83 (346)
T d1jmxb_          17 PNNLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------NHYGDIYGIDLDTCKNTFHANLSSV   83 (346)
T ss_dssp             TTEEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEEEEEEESCCS
T ss_pred             CCEEEEEECCC----CCEEEEEEcCCCCCcceEEECCCCCEEEEEE---------CCCCcEEEEeCccCeeeeeeccccc
Confidence            45899999999    8876543355555577899999999886643         3457899999999875443222211


Q ss_pred             c--ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEE
Q 004475           84 C--LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL  161 (751)
Q Consensus        84 ~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  161 (751)
                      .  .......+++||||++|+...........                                     ........+.+
T Consensus        84 ~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~-------------------------------------~~~~~~~~i~~  126 (346)
T d1jmxb_          84 PGEVGRSMYSFAISPDGKEVYATVNPTQRLND-------------------------------------HYVVKPPRLEV  126 (346)
T ss_dssp             TTEEEECSSCEEECTTSSEEEEEEEEEEECSS-------------------------------------CEEECCCEEEE
T ss_pred             ccccCCceEEEEEecCCCEEEEEecCCcceee-------------------------------------eeccCcceEEE
Confidence            1  11123478999999999877432110000                                     00001135666


Q ss_pred             EcC-CCCce-ec---CCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCc
Q 004475          162 GSL-DGTAK-DF---GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC  236 (751)
Q Consensus       162 ~~~-~G~~~-~l---t~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~  236 (751)
                      ++. +++.. .+   ..+.......+++|++.++.                ..++.+|+..+++........        
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~--------  182 (346)
T d1jmxb_         127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA----------------GPDIYKMDVKTGKYTVALPLR--------  182 (346)
T ss_dssp             EEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE----------------SSSEEEECTTTCCEEEEECST--------
T ss_pred             EecccceeeeEEEeeeccCceEEEEecCCCEEEEe----------------CCcceEEEccCCCEEEEEecC--------
Confidence            666 55321 22   11233445667777765432                123567777655433221111        


Q ss_pred             cCCccCCCceeeeecCCCceEEEEEeccC--------------CCCccccCcccceeeccCCCCCCCCceE--eEeecee
Q 004475          237 YNSVREGMRSISWRADKPSTLYWVEAQDR--------------GDANVEVSPRDIIYTQPAEPAEGEKPEI--LHKLDLR  300 (751)
Q Consensus       237 ~~~~~~~~~~~~~spdG~~~i~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~--l~~~~~~  300 (751)
                           ...+.+.++|+|.. ++.......              ............+.+++..   ......  .......
T Consensus       183 -----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  253 (346)
T d1jmxb_         183 -----NWNRKGYSAPDVLY-FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK---TGKTHTQEFADLTEL  253 (346)
T ss_dssp             -----TCCCTTBCCCBCCC-CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT---TCCEEEEEEEECSSC
T ss_pred             -----CCccceEEeccccE-EEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECC---CCceEEEEeecccce
Confidence                 11234466666665 222110000              0000011122356666664   222222  2223334


Q ss_pred             EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceE
Q 004475          301 FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY  379 (751)
Q Consensus       301 ~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~  379 (751)
                      .. ..+++++..+++...     ..+.++|+.++  +........ .....      ++|||||++|+....+       
T Consensus       254 ~~~~~~~~~~~~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~-~~~~~------va~s~DG~~l~v~~~d-------  312 (346)
T d1jmxb_         254 YFTGLRSPKDPNQIYGVL-----NRLAKYDLKQR--KLIKAANLD-HTYYC------VAFDKKGDKLYLGGTF-------  312 (346)
T ss_dssp             EEEEEECSSCTTEEEEEE-----SEEEEEETTTT--EEEEEEECS-SCCCE------EEECSSSSCEEEESBS-------
T ss_pred             eEEEEEeCCCCEEEEecC-----CeEEEEECCCC--cEEEEEcCC-CCEEE------EEEcCCCCEEEEEeCC-------
Confidence            44 788999998887552     35788888774  222222211 11222      8899999999876622       


Q ss_pred             EEEccCCCCCCCCCceeEEEecCCCceeEEeec
Q 004475          380 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWES  412 (751)
Q Consensus       380 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~  412 (751)
                                    ..|.+||+++++.......
T Consensus       313 --------------~~v~v~D~~t~~~i~~i~~  331 (346)
T d1jmxb_         313 --------------NDLAVFNPDTLEKVKNIKL  331 (346)
T ss_dssp             --------------SEEEEEETTTTEEEEEEEC
T ss_pred             --------------CcEEEEECccCCEEEEEEC
Confidence                          2688999999877544443


No 100
>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]}
Probab=99.36  E-value=5e-12  Score=125.04  Aligned_cols=211  Identities=10%  Similarity=-0.057  Sum_probs=120.2

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE  568 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~  568 (751)
                      .+|.++.....   +       ..|+||++||.+.           +...|..    +... ++++|.|++   ++.+|+
T Consensus        15 ~~g~~i~y~~~---G-------~g~~vvllHG~~~-----------~~~~~~~----~~~~-L~~~~~vi~---~Dl~G~   65 (298)
T d1mj5a_          15 IKGRRMAYIDE---G-------TGDPILFQHGNPT-----------SSYLWRN----IMPH-CAGLGRLIA---CDLIGM   65 (298)
T ss_dssp             ETTEEEEEEEE---S-------CSSEEEEECCTTC-----------CGGGGTT----TGGG-GTTSSEEEE---ECCTTS
T ss_pred             ECCEEEEEEEE---c-------CCCcEEEECCCCC-----------CHHHHHH----HHHH-HhcCCEEEE---EeCCCC
Confidence            46777776543   1       1378999999642           1122222    1222 346789999   566677


Q ss_pred             CCCCCCch--hHH-HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCCCccCc
Q 004475          569 GDKLPNDR--FVE-QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF  645 (751)
Q Consensus       569 g~~~~~~~--~~~-~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~  645 (751)
                      |.+.....  ... ....+....+..+.+..  ..+++.++||||||.+++.++.++|+++.++++..+...........
T Consensus        66 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~  143 (298)
T d1mj5a_          66 GDSDKLDPSGPERYAYAEHRDYLDALWEALD--LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFP  143 (298)
T ss_dssp             TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTT--CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSC
T ss_pred             CCCCCCccccccccccchhhhhhcccccccc--ccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhh
Confidence            76643211  111 11122223333333332  34689999999999999999999999999999877653211100000


Q ss_pred             ccc------------------c------------ccch----------------hhHHHH------------------Hh
Q 004475          646 QTE------------------F------------RTLW----------------EATNVY------------------IE  661 (751)
Q Consensus       646 ~~~------------------~------------~~~~----------------~~~~~~------------------~~  661 (751)
                      ...                  .            ....                ......                  ..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (298)
T d1mj5a_         144 EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIA  223 (298)
T ss_dssp             GGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhh
Confidence            000                  0            0000                000000                  00


Q ss_pred             cCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHHH
Q 004475          662 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       662 ~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      ......+..+++|+|+++|++|...+   ....++.    +.-...++++. ++||... .+..+++.+.+.+||++.
T Consensus       224 ~~~~~~~~~~~~P~l~i~g~~d~~~~---~~~~~~~----~~~p~~~~~~~-~~GH~~~-~e~P~~v~~~i~~fl~~~  292 (298)
T d1mj5a_         224 RDYAGWLSESPIPKLFINAEPGALTT---GRMRDFC----RTWPNQTEITV-AGAHFIQ-EDSPDEIGAAIAAFVRRL  292 (298)
T ss_dssp             HHHHHHHTTCCSCEEEEEEEECSSSS---HHHHHHH----TTCSSEEEEEE-EESSCGG-GTCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcceeEEEEecCCCCcCh---HHHHHHH----HHCCCCEEEEe-CCCCchH-HhCHHHHHHHHHHHHhhh
Confidence            00112246788999999999998765   4444433    33234556555 5689876 677889999999999886


No 101
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.33  E-value=4.3e-10  Score=112.84  Aligned_cols=168  Identities=11%  Similarity=0.003  Sum_probs=94.1

Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee-eeeccCCCCCCCCCccCCccCCCceeeeecCC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADK  253 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG  253 (751)
                      ..+..++|+|||++|+......           ...+.+++.++++. ..+..             ....+..++|+|++
T Consensus       116 ~~v~~v~~s~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~  171 (325)
T d1pgua1         116 GPISDISWDFEGRRLCVVGEGR-----------DNFGVFISWDSGNSLGEVSG-------------HSQRINACHLKQSR  171 (325)
T ss_dssp             SCEEEEEECTTSSEEEEEECCS-----------SCSEEEEETTTCCEEEECCS-------------CSSCEEEEEECSSS
T ss_pred             CcEEEEEECCCCCccceeeccc-----------cceEEEEeecccccceeeee-------------cccccccccccccc
Confidence            5677899999999998876543           22355677665432 22211             11235578999999


Q ss_pred             CceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeE---eeceeEE-EEEecCCceEEEeeeecccceeEEEec
Q 004475          254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH---KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVC  329 (751)
Q Consensus       254 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~---~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~  329 (751)
                      +.+++..+            ..+.+.+++...  ......+.   .....+. ++|+||+..++.+..   ....|.+++
T Consensus       172 ~~~~~~~~------------~d~~v~~~d~~~--~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~---~d~~i~iwd  234 (325)
T d1pgua1         172 PMRSMTVG------------DDGSVVFYQGPP--FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG---SDRKISCFD  234 (325)
T ss_dssp             SCEEEEEE------------TTTEEEEEETTT--BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE---TTCCEEEEE
T ss_pred             cceEEEee------------cccccccccccc--cccceecccccCCCCccEEeeeccccceeccccc---cccceeeee
Confidence            98333332            224566676531  11111111   1233356 899998654443331   123566667


Q ss_pred             CCCCCCcceeeeecccccccCCCCCCCeeeC---CCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCce
Q 004475          330 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRT---STGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK  406 (751)
Q Consensus       330 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s---pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~  406 (751)
                      ..++  +...........+..      ..|+   |||++|+..+.+                     ..|.+||+.+++.
T Consensus       235 ~~~~--~~~~~l~~~~~~v~~------~~~s~~~~dg~~l~s~s~D---------------------~~i~iwd~~~~~~  285 (325)
T d1pgua1         235 GKSG--EFLKYIEDDQEPVQG------GIFALSWLDSQKFATVGAD---------------------ATIRVWDVTTSKC  285 (325)
T ss_dssp             TTTC--CEEEECCBTTBCCCS------CEEEEEESSSSEEEEEETT---------------------SEEEEEETTTTEE
T ss_pred             eccc--ccccccccccccccc------ceeeeeccCCCEEEEEeCC---------------------CeEEEEECCCCCE
Confidence            7664  222222222222211      3344   799988887732                     2688999998877


Q ss_pred             eEEeec
Q 004475          407 ERIWES  412 (751)
Q Consensus       407 ~~l~~~  412 (751)
                      .+.+..
T Consensus       286 ~~~~~~  291 (325)
T d1pgua1         286 VQKWTL  291 (325)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            555443


No 102
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.31  E-value=3.1e-11  Score=123.82  Aligned_cols=266  Identities=9%  Similarity=-0.092  Sum_probs=142.9

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ..+||++|.++    ++......  .+ ....++|||||+.|++..........+.....|+++|+.+++.......+..
T Consensus        45 ~~~~~~~d~~~----~~~~~~~~--~~-~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~  117 (368)
T d1mdah_          45 TTENWVSCAGC----GVTLGHSL--GA-FLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA  117 (368)
T ss_dssp             SEEEEEEETTT----TEEEEEEE--EC-TTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred             cceEEEEeCCC----CcEEEEEe--CC-CCCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCcc
Confidence            45799999988    88877652  22 2457999999999999875221111123346799999998876543221111


Q ss_pred             c---ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEE
Q 004475           84 C---LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV  160 (751)
Q Consensus        84 ~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  160 (751)
                      .   .......++|||||++|++.....                                                ..++
T Consensus       118 ~~~~~g~~p~~~a~SpDGk~l~va~~~~------------------------------------------------~~v~  149 (368)
T d1mdah_         118 PRFSVGPRVHIIGNCASSACLLFFLFGS------------------------------------------------SAAA  149 (368)
T ss_dssp             CSCCBSCCTTSEEECTTSSCEEEEECSS------------------------------------------------SCEE
T ss_pred             ceecccCCccceEECCCCCEEEEEeCCC------------------------------------------------CeEE
Confidence            0   000123679999999999874321                                                2455


Q ss_pred             EEcC-CCCce-ecCCC--------ceEEeeeeCCCCceEEEEEecCCccccc--------c-----------c----CCC
Q 004475          161 LGSL-DGTAK-DFGTP--------AVYTAVEPSPDQKYVLITSMHRPYSYKV--------P-----------C----ARF  207 (751)
Q Consensus       161 ~~~~-~G~~~-~lt~~--------~~~~~~~~SpDG~~i~~~~~~~~~~~~~--------~-----------~----~~~  207 (751)
                      ++|+ +++.. .+..+        .....+.+++||+.+++...........        .           .    ...
T Consensus       150 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (368)
T d1mdah_         150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV  229 (368)
T ss_dssp             EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred             EEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec
Confidence            5565 44221 11111        1122456777777666654332110000        0           0    001


Q ss_pred             ceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCC
Q 004475          208 SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE  287 (751)
Q Consensus       208 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  287 (751)
                      ...+++++..++....+..................+...++++|+++. ++....... ..  .......|+++|.+   
T Consensus       230 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~-~~v~~~~~~-~~--~~~~~~~v~v~D~~---  302 (368)
T d1mdah_         230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG-IMILTVEHS-RS--CLAAAENTSSVTAS---  302 (368)
T ss_dssp             SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTE-EEEEEEECS-SC--TTSCEEEEEEEESS---
T ss_pred             CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCE-EEEEecCCC-ce--eecCCceEEEEECC---
Confidence            234666666655554443322211110000111123456899999998 554432211 11  11222478888885   


Q ss_pred             CCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCC
Q 004475          288 GEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       288 ~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~  333 (751)
                      +++............ +.|||||+.++|.+...  ...|+++|..++
T Consensus       303 t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~--~~~v~v~D~~tg  347 (368)
T d1mdah_         303 VGQTSGPISNGHDSDAIIAAQDGASDNYANSAG--TEVLDIYDAASD  347 (368)
T ss_dssp             SCCEEECCEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEESSSC
T ss_pred             CCcEeEEecCCCceeEEEECCCCCEEEEEEeCC--CCeEEEEECCCC
Confidence            333222222233344 89999999887777432  357999999885


No 103
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.26  E-value=3.9e-10  Score=113.33  Aligned_cols=136  Identities=15%  Similarity=0.147  Sum_probs=82.3

Q ss_pred             CceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhh
Q 004475           60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD  139 (751)
Q Consensus        60 ~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (751)
                      ...+|.++|+++++...........  .....+++||||++|+.....                                
T Consensus         9 ~d~~v~v~D~~s~~~~~~i~~~~~~--~~~~~i~~spDg~~l~v~~~~--------------------------------   54 (337)
T d1pbyb_           9 RPDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVNK--------------------------------   54 (337)
T ss_dssp             TTTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEETT--------------------------------
T ss_pred             CCCEEEEEECCCCeEEEEEECCCCC--CCccEEEECCCCCEEEEEECC--------------------------------
Confidence            3478999999998754433222111  124678999999998765221                                


Q ss_pred             hccCCccchhhhhhheeeEEEEEcC-CCCce-ecCCC------ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeE
Q 004475          140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKV  211 (751)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~-~lt~~------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l  211 (751)
                                      ...|+++|+ +|+.. .+...      .....++|||||+++++........ ..........+
T Consensus        55 ----------------~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~-~~~~~~~~~~~  117 (337)
T d1pbyb_          55 ----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE-LTHFEVQPTRV  117 (337)
T ss_dssp             ----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC-SSCEEECCCEE
T ss_pred             ----------------CCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcce-eeeccccccce
Confidence                            147888898 77432 33221      1233789999999998876543211 00011123567


Q ss_pred             EEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEE
Q 004475          212 QVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV  260 (751)
Q Consensus       212 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~  260 (751)
                      .++|..+++........             ..+..++|+|||++ ++..
T Consensus       118 ~~~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~  152 (337)
T d1pbyb_         118 ALYDAETLSRRKAFEAP-------------RQITMLAWARDGSK-LYGL  152 (337)
T ss_dssp             EEEETTTTEEEEEEECC-------------SSCCCEEECTTSSC-EEEE
T ss_pred             eeccccCCeEEEecccc-------------CCceEEEEcCCCCE-EEEE
Confidence            88998877654332221             23457899999998 5554


No 104
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26  E-value=3.4e-11  Score=116.78  Aligned_cols=82  Identities=15%  Similarity=0.023  Sum_probs=56.7

Q ss_pred             hHHHHHHh--CCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 004475          545 TSSLIFLA--RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA  622 (751)
Q Consensus       545 ~~~~~~~~--~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~  622 (751)
                      .+...|.+  .||.|++   .+.+|+|.+..+..+   ..+++.+.+..+.+.  .. +++.++||||||.+|+.+|.++
T Consensus        20 ~~~~~l~~~~~~~~v~~---~d~~G~g~S~~~~~~---~~~~~~~~l~~~l~~--l~-~~~~lvGhS~GG~ia~~~a~~~   90 (268)
T d1pjaa_          20 HLLEYINETHPGTVVTV---LDLFDGRESLRPLWE---QVQGFREAVVPIMAK--AP-QGVHLICYSQGGLVCRALLSVM   90 (268)
T ss_dssp             HHHHHHHHHSTTCCEEE---CCSSCSGGGGSCHHH---HHHHHHHHHHHHHHH--CT-TCEEEEEETHHHHHHHHHHHHC
T ss_pred             HHHHHHHhhCCCeEEEE---eCCCCCCCCCCcccc---CHHHHHHHHHHHHhc--cC-CeEEEEccccHHHHHHHHHHHC
Confidence            34456665  4899999   667788887554321   223333333333332  23 6899999999999999999999


Q ss_pred             CC-ceeEEEEccCC
Q 004475          623 PH-LFCCGIARSGS  635 (751)
Q Consensus       623 p~-~~~~~v~~~~~  635 (751)
                      |+ +++.+|+.++.
T Consensus        91 p~~~v~~lvl~~~~  104 (268)
T d1pjaa_          91 DDHNVDSFISLSSP  104 (268)
T ss_dssp             TTCCEEEEEEESCC
T ss_pred             CccccceEEEECCC
Confidence            98 69999888764


No 105
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22  E-value=1.3e-09  Score=112.02  Aligned_cols=238  Identities=14%  Similarity=0.079  Sum_probs=133.6

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .+...+|||||++|+..+          ..+.|.+++...++..........    .+..+.|++++..++..+..    
T Consensus       123 ~V~~l~~s~~~~~l~s~~----------~dg~v~i~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~~~~~~----  184 (388)
T d1erja_         123 YIRSVCFSPDGKFLATGA----------EDRLIRIWDIENRKIVMILQGHEQ----DIYSLDYFPSGDKLVSGSGD----  184 (388)
T ss_dssp             BEEEEEECTTSSEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred             CEEEEEECCCCCcceecc----------cccccccccccccccccccccccc----cccccccccccccccccccc----
Confidence            467789999999998753          335688888887765554433221    36788999999988877432    


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCCceEE-eeeeCCCCce
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYT-AVEPSPDQKY  188 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~~~~~-~~~~SpDG~~  188 (751)
                                                                   ..+.+++. +... .......... ...+++||+.
T Consensus       185 ---------------------------------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (388)
T d1erja_         185 ---------------------------------------------RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKY  219 (388)
T ss_dssp             ---------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCE
T ss_pred             ---------------------------------------------eeeeeeeccccccccccccccccccccccCCCCCe
Confidence                                                         46677777 3322 2222223333 3445568888


Q ss_pred             EEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475          189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD  267 (751)
Q Consensus       189 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~  267 (751)
                      |+....+             ..+.+|+..++... .+.... .     ........+..+.|+|||+. |+..+      
T Consensus       220 l~~~~~d-------------~~i~i~~~~~~~~~~~~~~~~-~-----~~~~h~~~v~~l~~s~~~~~-l~s~~------  273 (388)
T d1erja_         220 IAAGSLD-------------RAVRVWDSETGFLVERLDSEN-E-----SGTGHKDSVYSVVFTRDGQS-VVSGS------  273 (388)
T ss_dssp             EEEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSE-EEEEE------
T ss_pred             EEEEcCC-------------CeEEEeecccCccceeecccc-c-----cccCCCCCEEEEEECCCCCE-EEEEE------
Confidence            8765433             35888998765432 221111 0     01112234678999999997 55433      


Q ss_pred             CccccCcccceeeccCCCCCC----------CCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCc
Q 004475          268 ANVEVSPRDIIYTQPAEPAEG----------EKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA  336 (751)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~----------~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~  336 (751)
                            ..+.|.++++.....          ............+. ++|+|+|++|+.+..    ...|.+.|+.++  +
T Consensus       274 ------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~----dg~i~vwd~~~~--~  341 (388)
T d1erja_         274 ------LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK----DRGVLFWDKKSG--N  341 (388)
T ss_dssp             ------TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET----TSEEEEEETTTC--C
T ss_pred             ------CCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeC----CCEEEEEECCCC--c
Confidence                  224666666531100          00111112234456 899999998887652    246777788774  2


Q ss_pred             ceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          337 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       337 ~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      ...........+......+...|+|||+.|+..+
T Consensus       342 ~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s  375 (388)
T d1erja_         342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS  375 (388)
T ss_dssp             EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred             EEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEe
Confidence            2222222111111100111145899999888777


No 106
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.22  E-value=2.2e-09  Score=106.22  Aligned_cols=247  Identities=15%  Similarity=0.098  Sum_probs=146.7

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ...|.+||+.+    ++....-. .....+....|+|+|..++....          ...+...+....+..........
T Consensus        38 Dg~i~iWd~~~----~~~~~~~~-~h~~~V~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  102 (317)
T d1vyhc1          38 DATIKVWDYET----GDFERTLK-GHTDSVQDISFDHSGKLLASCSA----------DMTIKLWDFQGFECIRTMHGHDH  102 (317)
T ss_dssp             SSCEEEEETTT----CCCCEEEC-CCSSCEEEEEECTTSSEEEEEET----------TSCCCEEETTSSCEEECCCCCSS
T ss_pred             CCeEEEEECCC----CCEEEEEe-CCCCcEEEEeeeccccccccccc----------ccccccccccccccccccccccc
Confidence            45699999988    77655321 12235788999999999988642          23444555555554443322221


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                          .+....|+|+++.|+....+                                                 ..+.+++
T Consensus       103 ----~~~~~~~~~~~~~~~~~~~d-------------------------------------------------~~~~~~~  129 (317)
T d1vyhc1         103 ----NVSSVSIMPNGDHIVSASRD-------------------------------------------------KTIKMWE  129 (317)
T ss_dssp             ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred             ----cceeeeccCCCceEEeeccC-------------------------------------------------cceeEee
Confidence                35678999999998877432                                                 3566677


Q ss_pred             C-CCC-ceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCCCCccCC
Q 004475          164 L-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNS  239 (751)
Q Consensus       164 ~-~G~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~  239 (751)
                      + +++ ...+..+ ..+..++|+|||+.|+....+             ..+.+|+..+++... +....           
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~v~~~~~~~~~~~~~~~~~~-----------  185 (317)
T d1vyhc1         130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND-------------QTVRVWVVATKECKAELREHR-----------  185 (317)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCCS-----------
T ss_pred             cccceeeeEEccCCCcceeeecccCCCEEEEEeCC-------------CeEEEEeeccceeeEEEecCC-----------
Confidence            7 553 3344434 667789999999998876543             357788877554332 21111           


Q ss_pred             ccCCCceeeeecCCCce-------------------EEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeecee
Q 004475          240 VREGMRSISWRADKPST-------------------LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLR  300 (751)
Q Consensus       240 ~~~~~~~~~~spdG~~~-------------------i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~  300 (751)
                        ..+..+.|+|++...                   ++..+            ..+.+.++++..  +.....+......
T Consensus       186 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~d~~i~~~~~~~--~~~~~~~~~~~~~  249 (317)
T d1vyhc1         186 --HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS------------RDKTIKMWDVST--GMCLMTLVGHDNW  249 (317)
T ss_dssp             --SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE------------TTSEEEEEETTT--TEEEEEEECCSSC
T ss_pred             --CCceEEEEeeccccceeeccccceeeeeccCCceeEecc------------CCCEEEEEECCC--CcEEEEEeCCCCC
Confidence              112234444444321                   11111            224677777641  2222334444556


Q ss_pred             EE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          301 FS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       301 ~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      +. +.|+|+|+.|+.+..    ...|.+.++.++  +...........+..      ++|+|||+.|+..+
T Consensus       250 v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~~h~~~V~~------~~~s~~~~~l~s~s  308 (317)
T d1vyhc1         250 VRGVLFHSGGKFILSCAD----DKTLRVWDYKNK--RCMKTLNAHEHFVTS------LDFHKTAPYVVTGS  308 (317)
T ss_dssp             EEEEEECSSSSCEEEEET----TTEEEEECCTTS--CCCEEEECCSSCEEE------EEECSSSSCEEEEE
T ss_pred             EEEEEECCCCCEEEEEEC----CCeEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEe
Confidence            66 899999999887652    246777788774  223322222222333      78999999998877


No 107
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Probab=99.21  E-value=7.1e-11  Score=106.76  Aligned_cols=152  Identities=13%  Similarity=-0.009  Sum_probs=97.5

Q ss_pred             hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC--
Q 004475          545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--  622 (751)
Q Consensus       545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~--  622 (751)
                      .+...|.++||.++.+   ...+++......   ....+++.+.++.+.++.  ..+++.++||||||.++..++.++  
T Consensus        20 ~l~~~l~~~g~~~~~~---~~~~~~~~~~~~---~~~~~~l~~~i~~~~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~   91 (179)
T d1ispa_          20 GIKSYLVSQGWSRDKL---YAVDFWDKTGTN---YNNGPVLSRFVQKVLDET--GAKKVDIVAHSMGGANTLYYIKNLDG   91 (179)
T ss_dssp             HHHHHHHHTTCCGGGE---EECCCSCTTCCH---HHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHSSG
T ss_pred             HHHHHHHHcCCeEEEE---ecCCcccccccc---chhhhhHHHHHHHHHHhc--CCceEEEEeecCcCHHHHHHHHHcCC
Confidence            4566888999987662   333444432222   234455666666665542  346899999999999999999876  


Q ss_pred             CCceeEEEEccCCCCCCCCccCcccccccchhhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHh
Q 004475          623 PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG  702 (751)
Q Consensus       623 p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~  702 (751)
                      |++++.+|++++........ ...                   ........|++.++|..|.+|+  +..+     .+  
T Consensus        92 ~~~V~~~V~l~~p~~g~~~~-~l~-------------------~~~~~~~~~~~~i~~~~D~~v~--~~~~-----~l--  142 (179)
T d1ispa_          92 GNKVANVVTLGGANRLTTGK-ALP-------------------GTDPNQKILYTSIYSSADMIVM--NYLS-----RL--  142 (179)
T ss_dssp             GGTEEEEEEESCCGGGTCSB-CCC-------------------CSCTTCCCEEEEEEETTCSSSC--HHHH-----CC--
T ss_pred             chhhCEEEEECCCCCCchhh-hcC-------------------CcccccCceEEEEEecCCcccC--chhh-----cC--
Confidence            57899999988753211000 000                   0112246899999999999998  6543     12  


Q ss_pred             CCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          703 HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       703 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                        ...+.+.+++.+|......  .++.+.+.+||+
T Consensus       143 --~~~~~~~~~~~~H~~l~~~--~~v~~~i~~~L~  173 (179)
T d1ispa_         143 --DGARNVQIHGVGHIGLLYS--SQVNSLIKEGLN  173 (179)
T ss_dssp             --BTSEEEEESSCCTGGGGGC--HHHHHHHHHHHT
T ss_pred             --CCceEEEECCCCchhhccC--HHHHHHHHHHHh
Confidence              1235678899999754322  356777777775


No 108
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.21  E-value=5.9e-10  Score=112.02  Aligned_cols=267  Identities=9%  Similarity=0.033  Sum_probs=138.2

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      .+...+|||||++||..+          ..+.|.++++.+++..........    .+..++|+|+|+.|+..+.+....
T Consensus        57 ~I~~l~~s~~~~~l~sgs----------~Dg~v~iWd~~~~~~~~~~~~~~~----~v~~v~~~~~~~~l~~~~~d~~i~  122 (340)
T d1tbga_          57 KIYAMHWGTDSRLLVSAS----------QDGKLIIWDSYTTNKVHAIPLRSS----WVMTCAYAPSGNYVACGGLDNICS  122 (340)
T ss_dssp             CEEEEEECTTSSEEEEEE----------TTTEEEEEETTTTEEEEEEECSCS----CEEEEEECTTSSEEEEEETTCCEE
T ss_pred             CEEEEEECCCCCEEEEEE----------CCCceeeeecccceeEEEEecccc----cEEeeEeeccceeeeeecccceee
Confidence            588999999999998853          336788889988875443332221    377899999999998876543211


Q ss_pred             CCCC-CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC-Cceec-CCCceEEeeeeCCCCc
Q 004475          112 PPKK-TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDF-GTPAVYTAVEPSPDQK  187 (751)
Q Consensus       112 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~~l-t~~~~~~~~~~SpDG~  187 (751)
                      .-.. ...................     .......+................. .. ..... .....+....+.+++.
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (340)
T d1tbga_         123 IYNLKTREGNVRVSRELAGHTGYL-----SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR  197 (340)
T ss_dssp             EEESSSSCSCCCEEEEECCCSSCE-----EEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred             cccccccccccccceecccccccc-----cccccccccccccccccccccccccccccccccccccceeEeeeccccccc
Confidence            0000 0000000000000000000     0000000000000000011111222 11 11111 1124556677888887


Q ss_pred             eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC
Q 004475          188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD  267 (751)
Q Consensus       188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~  267 (751)
                      .++....             ...+.+||+.+++......            .....+..++|+|||+. ++..+      
T Consensus       198 ~~~~~~~-------------d~~v~i~d~~~~~~~~~~~------------~h~~~i~~v~~~p~~~~-l~s~s------  245 (340)
T d1tbga_         198 LFVSGAC-------------DASAKLWDVREGMCRQTFT------------GHESDINAICFFPNGNA-FATGS------  245 (340)
T ss_dssp             EEEEEET-------------TTEEEEEETTTTEEEEEEC------------CCSSCEEEEEECTTSSE-EEEEE------
T ss_pred             eeEEeec-------------CceEEEEECCCCcEEEEEe------------CCCCCeEEEEECCCCCE-EEEEe------
Confidence            7765433             2368899998765432211            11233568899999997 55543      


Q ss_pred             CccccCcccceeeccCCCCCCCCc-eEeE--eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeec
Q 004475          268 ANVEVSPRDIIYTQPAEPAEGEKP-EILH--KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR  343 (751)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~-~~l~--~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~  343 (751)
                            ..+.++++++.   .... ..+.  .....+. +.|+|+|+.|+.+..    ...|.+.++.++  +.......
T Consensus       246 ------~d~~i~~~~~~---~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~----dg~i~iwd~~~~--~~~~~~~~  310 (340)
T d1tbga_         246 ------DDATCRLFDLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD----DFNCNVWDALKA--DRAGVLAG  310 (340)
T ss_dssp             ------TTSCEEEEETT---TTEEEEEECCTTCCSCEEEEEECSSSCEEEEEET----TSCEEEEETTTC--CEEEEECC
T ss_pred             ------CCCeEEEEeec---ccccccccccccccCceEEEEECCCCCEEEEEEC----CCEEEEEECCCC--cEEEEEcC
Confidence                  23467777774   2121 1111  1233456 899999998877552    245777787764  22332222


Q ss_pred             ccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          344 VFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       344 ~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      ....+..      ++|+|||++|+..+
T Consensus       311 H~~~V~~------l~~s~d~~~l~s~s  331 (340)
T d1tbga_         311 HDNRVSC------LGVTDDGMAVATGS  331 (340)
T ss_dssp             CSSCEEE------EEECTTSSCEEEEE
T ss_pred             CCCCEEE------EEEeCCCCEEEEEc
Confidence            2223333      78999999988777


No 109
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]}
Probab=99.20  E-value=1.2e-11  Score=120.98  Aligned_cols=145  Identities=18%  Similarity=0.214  Sum_probs=93.6

Q ss_pred             CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEE-ccCC-CCCCCCcc--Ccc----cccccchhhHHHHHhcCcccc
Q 004475          596 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA-RSGS-YNKTLTPF--GFQ----TEFRTLWEATNVYIEMSPITH  667 (751)
Q Consensus       596 ~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~-~~~~-~d~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~  667 (751)
                      ..+|++||+|+|+|+||+||+.++..+|+.|++.+. +++. +.-.....  ...    .....+....+.+....+...
T Consensus         6 y~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   85 (318)
T d2d81a1           6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV   85 (318)
T ss_dssp             CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred             cCCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhcccchHHHhhcCCCCCcChhHHHHHHhhcCCcch
Confidence            458999999999999999999999999999974433 3332 11000000  000    001111112222222333333


Q ss_pred             cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC--CcEEEEEeCCCCCcCCcccc------------------HHH
Q 004475          668 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAAREN------------------VMH  727 (751)
Q Consensus       668 ~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~------------------~~~  727 (751)
                      ....+.|+||+||+.|.+||  +.++.+++++|++.+  .+++++..++++|.+.....                  -.+
T Consensus        86 ~~~~~~pvll~hG~~D~~Vp--p~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~~~~~pyi~~C~~d  163 (318)
T d2d81a1          86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD  163 (318)
T ss_dssp             GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred             hccCCCCEEEEecCCCCCcC--HHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCcccccccccCChhhhcCCCc
Confidence            33456899999999999999  999999999998764  46899999999998742110                  012


Q ss_pred             HHHHHHHHHHHHhcC
Q 004475          728 VIWETDRWLQKYCLS  742 (751)
Q Consensus       728 ~~~~~~~fl~~~l~~  742 (751)
                      ...++++||-.-+..
T Consensus       164 ~a~~iL~~~yg~~~~  178 (318)
T d2d81a1         164 GAGAALKWIYGSLNA  178 (318)
T ss_dssp             HHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHhcccCc
Confidence            346778888766653


No 110
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=99.17  E-value=1.9e-09  Score=109.61  Aligned_cols=188  Identities=10%  Similarity=-0.017  Sum_probs=99.2

Q ss_pred             eeEEeecCCCCCCCCccccc--CCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            6 GIGIHRLLPDDSLGPEKEVH--GYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~--~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      +||+..++.  .+++...+.  .++.....+..++||||+.|+-+.         .+....|.++.+++.....+.....
T Consensus        15 ~i~~~~fd~--~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_          15 AIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA---------MKKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE---------BTEEEEEEEEETTEEEEEEEEECCS
T ss_pred             CEEEEEEcC--CCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEe---------CCcEEEEEEeCCCCeEEEeeecCCC
Confidence            799999977  555544332  244444467789999998886653         3456777777665543333211110


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                          ....+..+|||+.++............        .......+                        ....++.++
T Consensus        84 ----~p~~v~~~~~~~~~~v~~a~~~~~~v~--------~~~~~~~~------------------------~~~~~~~~~  127 (365)
T d1jofa_          84 ----HPRANDADTNTRAIFLLAAKQPPYAVY--------ANPFYKFA------------------------GYGNVFSVS  127 (365)
T ss_dssp             ----SGGGGCTTSCCEEEEEEECSSTTCCEE--------EEEESSSC------------------------CEEEEEEEC
T ss_pred             ----CcEEEEECCCCCEEEEEEecCCCCEEE--------EeEccCCC------------------------CcceeEeee
Confidence                124557899999776654321111000        00000000                        113344444


Q ss_pred             CCCCceec------CCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC-ceeeeeccCCCCCCCCCc
Q 004475          164 LDGTAKDF------GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVC  236 (751)
Q Consensus       164 ~~G~~~~l------t~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l~~~~~~~~~~~~  236 (751)
                      .++.....      ......+.+.|+|||++|++....            ...+++++.+. +.........        
T Consensus       128 ~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g------------~d~v~~~~~~~~g~~~~~~~~~--------  187 (365)
T d1jofa_         128 ETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVD--------  187 (365)
T ss_dssp             TTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEE--------
T ss_pred             ecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCC------------CCEEEEEEccCCCceeecccee--------
Confidence            44422111      112456789999999999987543            23566665542 2222221100        


Q ss_pred             cCCccCCCceeeeecCCCceEEEEE
Q 004475          237 YNSVREGMRSISWRADKPSTLYWVE  261 (751)
Q Consensus       237 ~~~~~~~~~~~~~spdG~~~i~~~~  261 (751)
                      ......+.|.+.|+|||++ ++.+.
T Consensus       188 ~~~~g~gPr~i~f~pdg~~-~yv~~  211 (365)
T d1jofa_         188 APDPGDHPRWVAMHPTGNY-LYALM  211 (365)
T ss_dssp             CSSTTCCEEEEEECTTSSE-EEEEE
T ss_pred             ecCCCCceEEEEECCCCce-EEEec
Confidence            0112245789999999997 55543


No 111
>d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]}
Probab=99.17  E-value=1.7e-10  Score=119.00  Aligned_cols=212  Identities=9%  Similarity=-0.035  Sum_probs=129.6

Q ss_pred             CCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCC------eEEEEcCC
Q 004475          489 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR------FAVLAGPS  562 (751)
Q Consensus       489 ~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G------~~v~~~~~  562 (751)
                      .+|..|+..-.....      ...|.||++||-|              ..+..|. .....|++.|      |.|++   
T Consensus        89 i~G~~iHf~h~~~~~------~~~~pLlLlHG~P--------------~s~~~w~-~vi~~La~~g~~~~~~f~VIa---  144 (394)
T d1qo7a_          89 IEGLTIHFAALFSER------EDAVPIALLHGWP--------------GSFVEFY-PILQLFREEYTPETLPFHLVV---  144 (394)
T ss_dssp             ETTEEEEEEEECCSC------TTCEEEEEECCSS--------------CCGGGGH-HHHHHHHHHCCTTTCCEEEEE---
T ss_pred             ECCEEEEEEEEeccC------CCCCEEEEecccc--------------ccHHHHH-HHHHhhccccCCcccceeeec---
Confidence            378888887665433      1257899999954              2333322 4455777777      99999   


Q ss_pred             CCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCC
Q 004475          563 IPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK  638 (751)
Q Consensus       563 ~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~  638 (751)
                      ++.+|+|.+..+.    ........++...++.+      ...+.+++|||+||.++..+++.+|+.+.++++.......
T Consensus       145 PDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~l------g~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~  218 (394)
T d1qo7a_         145 PSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL------GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRA  218 (394)
T ss_dssp             ECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHT------TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCS
T ss_pred             ccccccCCCCCCCCCCccCHHHHHHHHHHHHhhc------cCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccc
Confidence            6677888875432    12344444444444433      2357899999999999999999999998888877654321


Q ss_pred             CCCccCcccc---c-------------c---------------------------------cch-----hhH------HH
Q 004475          639 TLTPFGFQTE---F-------------R---------------------------------TLW-----EAT------NV  658 (751)
Q Consensus       639 ~~~~~~~~~~---~-------------~---------------------------------~~~-----~~~------~~  658 (751)
                      ..........   .             .                                 ..|     ...      ..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~  298 (394)
T d1qo7a_         219 PPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSL  298 (394)
T ss_dssp             CSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHH
T ss_pred             cccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHH
Confidence            1110000000   0             0                                 000     000      00


Q ss_pred             -------------HHh-cC---------cccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 004475          659 -------------YIE-MS---------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE  715 (751)
Q Consensus       659 -------------~~~-~~---------~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~  715 (751)
                                   |.. ..         ......++++|+++++|.+|...+  +..   +.+.+.   ..+++.+++++
T Consensus       299 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~--p~~---~~~~~~---~~~~~~~~~~~  370 (394)
T d1qo7a_         299 YWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPV--PRS---WIATTG---NLVFFRDHAEG  370 (394)
T ss_dssp             HHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCC--CHH---HHGGGE---EEEEEEECSSC
T ss_pred             HhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCcccc--HHH---HHHhcc---CceEEEEcCCc
Confidence                         000 00         011123567899999999998765  432   333222   23567889999


Q ss_pred             CCcCCccccHHHHHHHHHHHHHHH
Q 004475          716 HHVYAARENVMHVIWETDRWLQKY  739 (751)
Q Consensus       716 ~H~~~~~~~~~~~~~~~~~fl~~~  739 (751)
                      ||... .+..+.+.+.|.+||++.
T Consensus       371 GHf~~-~E~Pe~~a~~I~~Fl~~v  393 (394)
T d1qo7a_         371 GHFAA-LERPRELKTDLTAFVEQV  393 (394)
T ss_dssp             BSCHH-HHCHHHHHHHHHHHHHHH
T ss_pred             CCchH-HhCHHHHHHHHHHHHHHh
Confidence            99865 788899999999999874


No 112
>d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=99.09  E-value=2.1e-09  Score=106.46  Aligned_cols=152  Identities=14%  Similarity=0.146  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCcE-EEEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC----------------Ccc
Q 004475          581 LVSSAEAAVEEVVRRGVADPSRI-AVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----------------TPF  643 (751)
Q Consensus       581 ~~~d~~~~v~~l~~~~~id~~~i-~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~----------------~~~  643 (751)
                      .+.|..++-..|.++-  .-+|+ .++|.||||+.|+..|+++|+++..+|++++......                ..|
T Consensus       115 ti~D~v~aq~~Ll~~L--GI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~  192 (357)
T d2b61a1         115 VVQDIVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNF  192 (357)
T ss_dssp             CHHHHHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTC
T ss_pred             hhHHHHHHHHHHHHHh--CcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHHHHHHHcCCCC
Confidence            4567777776676653  34677 7889999999999999999999999999887521000                000


Q ss_pred             -------------Cc---------------------ccc---cccch---hhHHHH------------------------
Q 004475          644 -------------GF---------------------QTE---FRTLW---EATNVY------------------------  659 (751)
Q Consensus       644 -------------~~---------------------~~~---~~~~~---~~~~~~------------------------  659 (751)
                                   +.                     ...   ....|   ...+.|                        
T Consensus       193 ~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~  272 (357)
T d2b61a1         193 NGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRAL  272 (357)
T ss_dssp             GGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             CCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHh
Confidence                         00                     000   00000   000111                        


Q ss_pred             HhcCc-------ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC-CCcCCccccHHHHHHH
Q 004475          660 IEMSP-------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE-HHVYAARENVMHVIWE  731 (751)
Q Consensus       660 ~~~~~-------~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~H~~~~~~~~~~~~~~  731 (751)
                      ...++       .+.+.+|++|+|++..+.|...|  +++.+++++.|+..++++++++++.. ||.-. ..+..++...
T Consensus       273 ~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFp--p~~~~~~a~~l~~~~~~v~~~~I~S~~GHdaf-L~e~~~~~~~  349 (357)
T d2b61a1         273 DMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKR  349 (357)
T ss_dssp             HHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHH
T ss_pred             hhcccccccccHHHHHhhcCCCEEEEEeCCccccC--HHHHHHHHHHHHhcCCCeEEEEECCCCCcccc-CcCHHHHHHH
Confidence            11111       11257899999999999999999  99999999999999999999999875 78643 2335566777


Q ss_pred             HHHHHH
Q 004475          732 TDRWLQ  737 (751)
Q Consensus       732 ~~~fl~  737 (751)
                      +.+||+
T Consensus       350 I~~fL~  355 (357)
T d2b61a1         350 IRDGLA  355 (357)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            888876


No 113
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.09  E-value=4.6e-08  Score=101.51  Aligned_cols=321  Identities=11%  Similarity=0.070  Sum_probs=174.6

Q ss_pred             CCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc--cccceeeeeEEecCCcEEEEeecCCCCCCCCCCC
Q 004475           40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTM  117 (751)
Q Consensus        40 PDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~  117 (751)
                      .+|.+..|....+     ......++......++.+.|.+....  .-...+..+++||||++|+|+...+....     
T Consensus        81 ~~g~~y~~~~~~~-----~~~~~~~~~~~~~~~~~evllD~n~la~~~~~~~~~~~~Spd~~~la~s~d~~G~e~-----  150 (430)
T d1qfma1          81 KKGKRYFYFYNTG-----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDW-----  150 (430)
T ss_dssp             EETTEEEEEEECS-----SCSSCEEEEESSSSSCCEEEECGGGGCSSSCEEEEEEEECTTSSEEEEEEEETTCSC-----
T ss_pred             EeCCEEEEEEecC-----CCccceEEeccccCCCeeeecchhhhcccccceecceEecCCCCEEEEEeccccCch-----
Confidence            4566666654321     13334566665555655554332110  00112346788999999999865433221     


Q ss_pred             CCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCceEEEEEec
Q 004475          118 VPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMH  195 (751)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~  195 (751)
                                                             ..|+++|+ +|+....+-. .....++|++|++.|+|+...
T Consensus       151 ---------------------------------------~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~  191 (430)
T d1qfma1         151 ---------------------------------------VTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYP  191 (430)
T ss_dssp             ---------------------------------------EEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECC
T ss_pred             ---------------------------------------heeEEeccCcceecccccccccccceEEcCCCCEEEEEEec
Confidence                                                   68999999 7754322211 223578999999999998765


Q ss_pred             CCccc---ccccCCCceeEEEEeCCCceee--eeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCcc
Q 004475          196 RPYSY---KVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV  270 (751)
Q Consensus       196 ~~~~~---~~~~~~~~~~l~~~d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~  270 (751)
                      .....   ..+.......++++.+.+....  .+......          ......+..|+||+++++.++..       
T Consensus       192 ~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~----------~~~~~~~~~s~d~~~l~i~~~~~-------  254 (430)
T d1qfma1         192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRYVLLSIREG-------  254 (430)
T ss_dssp             CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECS-------
T ss_pred             cccCcccccccccCCcceEEEEECCCCccccccccccccC----------CceEEeeeccCCcceeeEEeecc-------
Confidence            42111   1111223457888888765432  22221111          01122456799999844443311       


Q ss_pred             ccCcccceeeccCCCCCCC-----CceEeEe-eceeEEEEEecCCceEEEeeeecccceeEEEecCCCCCC-cceeeeec
Q 004475          271 EVSPRDIIYTQPAEPAEGE-----KPEILHK-LDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDR  343 (751)
Q Consensus       271 ~~~~~~~l~~~~~~~~~~~-----~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~  343 (751)
                       ......++.+++......     ....+.. ....+.. ...+|..+++.++.......|..+++..... ..+.+...
T Consensus       255 -~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~  332 (430)
T d1qfma1         255 -CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE  332 (430)
T ss_dssp             -SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECC
T ss_pred             -CCccEEEEEeeCCCcccccccccceeEeecccccceEE-EecCCceeecccCcccccceeEEecCCCCccccceEEecc
Confidence             112246777776321111     1122222 2222221 2345667777776665667899998876411 12333322


Q ss_pred             ccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceee
Q 004475          344 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA  423 (751)
Q Consensus       344 ~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~  423 (751)
                      ....+..      -.++..+.+|++...+                  .....|+++++++++...+...+..    .+..
T Consensus       333 ~~~~~~~------~~~~~~~~~lvl~~~~------------------~~~~~l~v~~~~~~~~~~~~~~~~~----sv~~  384 (430)
T d1qfma1         333 HEKDVLE------WVACVRSNFLVLCYLH------------------DVKNTLQLHDLATGALLKIFPLEVG----SVVG  384 (430)
T ss_dssp             CSSCEEE------EEEEETTTEEEEEEEE------------------TTEEEEEEEETTTCCEEEEECCCSS----EEEE
T ss_pred             cCcceee------eEEEEECCEEEEEEEc------------------CCEeEEEEEECCCCcEEEecCCCCc----eEee
Confidence            1111100      1133344455544422                  2345899999998888776544321    1222


Q ss_pred             eecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCce
Q 004475          424 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS  463 (751)
Q Consensus       424 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~  463 (751)
                             .+.++++..+.+..++...|+.+|.+|+.+|+.
T Consensus       385 -------~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         385 -------YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             -------EECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             -------ccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence                   244567888999999999999999999998864


No 114
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.06  E-value=6.3e-09  Score=104.10  Aligned_cols=206  Identities=9%  Similarity=-0.003  Sum_probs=113.2

Q ss_pred             cccceeecC--CCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCC---ccccceeeeeEEecCCcEEEEee
Q 004475           32 KINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPD---ICLNAVFGSFVWVNNSTLLIFTI  105 (751)
Q Consensus        32 ~~~~p~~SP--DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~---~~~~~~~~~~~wspDg~~l~~~~  105 (751)
                      .+...+|||  ||++||..+          ..+.|.+++...++. ..+.....   ......+..++|+|||++|+..+
T Consensus        65 ~v~~v~fsP~~~g~~lasgs----------~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~  134 (325)
T d1pgua1          65 VVTTVKFSPIKGSQYLCSGD----------ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG  134 (325)
T ss_dssp             CEEEEEECSSTTCCEEEEEE----------TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             CEEEEEEeeCCCCCEEEEEe----------CCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceee
Confidence            578899998  667777642          224555555544331 11110000   00111367889999999998875


Q ss_pred             cCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC-ceEEeeeeC
Q 004475          106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP-AVYTAVEPS  183 (751)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~-~~~~~~~~S  183 (751)
                      ......                                             ..++.++ +| ....+..+ ..+..++|+
T Consensus       135 ~~~~~~---------------------------------------------~~~~~~~-~~~~~~~~~~h~~~v~~~~~~  168 (325)
T d1pgua1         135 EGRDNF---------------------------------------------GVFISWD-SGNSLGEVSGHSQRINACHLK  168 (325)
T ss_dssp             CCSSCS---------------------------------------------EEEEETT-TCCEEEECCSCSSCEEEEEEC
T ss_pred             ccccce---------------------------------------------EEEEeec-ccccceeeeeccccccccccc
Confidence            421111                                             2333333 44 34445444 677889999


Q ss_pred             CCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeee-eccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475          184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA  262 (751)
Q Consensus       184 pDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~  262 (751)
                      |++++++++...            ...+.+|+....+... +...          ......+..++|+||+..+++... 
T Consensus       169 ~~~~~~~~~~~~------------d~~v~~~d~~~~~~~~~~~~~----------~~~~~~v~~v~~~pd~~~~l~s~~-  225 (325)
T d1pgua1         169 QSRPMRSMTVGD------------DGSVVFYQGPPFKFSASDRTH----------HKQGSFVRDVEFSPDSGEFVITVG-  225 (325)
T ss_dssp             SSSSCEEEEEET------------TTEEEEEETTTBEEEEEECSS----------SCTTCCEEEEEECSTTCCEEEEEE-
T ss_pred             ccccceEEEeec------------ccccccccccccccceecccc----------cCCCCccEEeeeccccceeccccc-
Confidence            999987765543            2357788887554322 2111          111233568899999766344332 


Q ss_pred             ccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEe---cCCceEEEeeeecccceeEEEecCCCC
Q 004475          263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWC---DDSLALVNETWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~s---pdg~~l~~~~~~~~~~~~l~~~~~~~~  333 (751)
                                 ..+.|.++++..  +.....+......+. ..|+   |||++|+..+.    ...|.+.++.++
T Consensus       226 -----------~d~~i~iwd~~~--~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~----D~~i~iwd~~~~  283 (325)
T d1pgua1         226 -----------SDRKISCFDGKS--GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGA----DATIRVWDVTTS  283 (325)
T ss_dssp             -----------TTCCEEEEETTT--CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEET----TSEEEEEETTTT
T ss_pred             -----------cccceeeeeecc--ccccccccccccccccceeeeeccCCCEEEEEeC----CCeEEEEECCCC
Confidence                       235688888741  222233333333333 3444   78998876552    234666677664


No 115
>d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]}
Probab=99.03  E-value=6.9e-09  Score=102.83  Aligned_cols=152  Identities=15%  Similarity=0.085  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCcEE-EEEeChHHHHHHHHHHhCCCceeEEEEccCCCCCCC----------------Ccc
Q 004475          581 LVSSAEAAVEEVVRRGVADPSRIA-VGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----------------TPF  643 (751)
Q Consensus       581 ~~~d~~~~v~~l~~~~~id~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~d~~~----------------~~~  643 (751)
                      .+.|+.++...|.+.-.|  +++. ++|.||||+.|+..|..+|+.++.+|++++......                ..|
T Consensus       122 t~~D~v~~~~~ll~~LGI--~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~  199 (362)
T d2pl5a1         122 SIQDMVKAQKLLVESLGI--EKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNW  199 (362)
T ss_dssp             CHHHHHHHHHHHHHHTTC--SSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTC
T ss_pred             hhHHHHHHHHHHHHHhCc--CeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHHHHHHHHHHhcCCcc
Confidence            356666666666665334  4555 889999999999999999999999999887522000                000


Q ss_pred             --C-ccc---cc-----------------------------c----c-----ch-----------hh-------HHHHHh
Q 004475          644 --G-FQT---EF-----------------------------R----T-----LW-----------EA-------TNVYIE  661 (751)
Q Consensus       644 --~-~~~---~~-----------------------------~----~-----~~-----------~~-------~~~~~~  661 (751)
                        + +..   ..                             .    .     .|           .+       .+.+..
T Consensus       200 ~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~  279 (362)
T d2pl5a1         200 KNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDH  279 (362)
T ss_dssp             GGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHH
T ss_pred             ccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhc
Confidence              0 000   00                             0    0     00           00       001111


Q ss_pred             cCc------ccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC-CCCcCCccccHHHHHHHHHH
Q 004475          662 MSP------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDR  734 (751)
Q Consensus       662 ~~~------~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~  734 (751)
                      .+.      .+.+.+|++|+|+|..+.|...|  +++.+++++.|+.++.+++++.++. .||.-. ..+..++...+.+
T Consensus       280 ~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFp--p~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaF-L~e~~~~~~~I~~  356 (362)
T d2pl5a1         280 YSLGKGKELTAALSNATCRFLVVSYSSDWLYP--PAQSREIVKSLEAADKRVFYVELQSGEGHDSF-LLKNPKQIEILKG  356 (362)
T ss_dssp             CBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG-GSCCHHHHHHHHH
T ss_pred             ccccccccHHHHHhhCCCCEEEEEeCcccCcC--HHHHHHHHHHHHhCCCCeEEEEeCCCCCcchh-ccCHHHHHHHHHH
Confidence            111      11267899999999999999999  9999999999999999999987764 578643 3345567778888


Q ss_pred             HHH
Q 004475          735 WLQ  737 (751)
Q Consensus       735 fl~  737 (751)
                      ||+
T Consensus       357 FL~  359 (362)
T d2pl5a1         357 FLE  359 (362)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            885


No 116
>d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]}
Probab=99.01  E-value=3.8e-10  Score=110.24  Aligned_cols=173  Identities=13%  Similarity=0.092  Sum_probs=97.4

Q ss_pred             hCCeEEEEcCCCCCCCCCCCCCC-----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----
Q 004475          552 ARRFAVLAGPSIPIIGEGDKLPN-----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----  622 (751)
Q Consensus       552 ~~G~~v~~~~~~~~~g~g~~~~~-----~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~----  622 (751)
                      ..++.|++   .+..|+|.+...     ....+.+..++.++|....     ...+++|+||||||.+|+.+|.+.    
T Consensus        86 ~~~~~V~a---l~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~-----~~~P~vL~GhS~GG~vA~e~A~~l~~~~  157 (283)
T d2h7xa1          86 QEERDFLA---VPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA-----GDAPVVLLGHSGGALLAHELAFRLERAH  157 (283)
T ss_dssp             TTTCCEEE---ECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH-----TTSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEE---EeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhc-----CCCceEEEEeccchHHHHHHHHhhHHHc
Confidence            34688888   455566544221     1234455544444333221     235799999999999999998754    


Q ss_pred             CCceeEEEEccCCCCCCCCccCccc---------ccccchhh-----HHHHHhcCcccccCCCCCCEEEEEcCCCCCCCC
Q 004475          623 PHLFCCGIARSGSYNKTLTPFGFQT---------EFRTLWEA-----TNVYIEMSPITHANKIKKPILIIHGEVDDKVGL  688 (751)
Q Consensus       623 p~~~~~~v~~~~~~d~~~~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~  688 (751)
                      +..+.+++++.+.............         ........     ...+...........+++|+++++|++|..++ 
T Consensus       158 g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~-  236 (283)
T d2h7xa1         158 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDW-  236 (283)
T ss_dssp             SCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCC-
T ss_pred             CCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCC-
Confidence            4568888888764321110000000         00000000     00111111112245688999999999999887 


Q ss_pred             ChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHHH
Q 004475          689 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       689 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~  738 (751)
                       ......+.+   .....++++.+|+ +|..+..+....+.+.|.+||+.
T Consensus       237 -~~~~~~w~~---~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~  281 (283)
T d2h7xa1         237 -QEERGDWRA---HWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDA  281 (283)
T ss_dssp             -CGGGCCCSC---CCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHH---hCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHh
Confidence             544332221   1233568899997 68654456677888899999975


No 117
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.00  E-value=3.3e-08  Score=98.80  Aligned_cols=121  Identities=6%  Similarity=0.058  Sum_probs=71.8

Q ss_pred             cceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc--cccccCCC
Q 004475          276 DIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV--FENVYSDP  352 (751)
Q Consensus       276 ~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~~~~  352 (751)
                      +.+.++++..  +.....+......+. ++|+|+|+.|+.++.    ...+.+.+....  .........  ...+.   
T Consensus       206 ~~v~i~d~~~--~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~----d~~i~~~~~~~~--~~~~~~~~~~~~~~i~---  274 (340)
T d1tbga_         206 ASAKLWDVRE--GMCRQTFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRAD--QELMTYSHDNIICGIT---  274 (340)
T ss_dssp             TEEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCTTCCSCEE---
T ss_pred             ceEEEEECCC--CcEEEEEeCCCCCeEEEEECCCCCEEEEEeC----CCeEEEEeeccc--ccccccccccccCceE---
Confidence            5678888741  222233334455667 899999998887652    235666666653  212221111  11111   


Q ss_pred             CCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCccee
Q 004475          353 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED  432 (751)
Q Consensus       353 ~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~  432 (751)
                         .++|+|||+.|+..+.+                     ..|++||+.+++....+.....    .+..       ++
T Consensus       275 ---~~~~s~~~~~l~~g~~d---------------------g~i~iwd~~~~~~~~~~~~H~~----~V~~-------l~  319 (340)
T d1tbga_         275 ---SVSFSKSGRLLLAGYDD---------------------FNCNVWDALKADRAGVLAGHDN----RVSC-------LG  319 (340)
T ss_dssp             ---EEEECSSSCEEEEEETT---------------------SCEEEEETTTCCEEEEECCCSS----CEEE-------EE
T ss_pred             ---EEEECCCCCEEEEEECC---------------------CEEEEEECCCCcEEEEEcCCCC----CEEE-------EE
Confidence               17899999998887722                     2688999988877555443211    1222       58


Q ss_pred             eccCCCEEEE
Q 004475          433 INLNQLKILT  442 (751)
Q Consensus       433 ~s~dg~~l~~  442 (751)
                      |+||++.|+-
T Consensus       320 ~s~d~~~l~s  329 (340)
T d1tbga_         320 VTDDGMAVAT  329 (340)
T ss_dssp             ECTTSSCEEE
T ss_pred             EeCCCCEEEE
Confidence            9999987764


No 118
>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}
Probab=99.00  E-value=4.9e-10  Score=106.05  Aligned_cols=185  Identities=11%  Similarity=0.004  Sum_probs=98.4

Q ss_pred             CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 004475          511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE  590 (751)
Q Consensus       511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~  590 (751)
                      ..|+||++||.+           ++...|    ..++..|  .+|.|++   ++..|.+.          .++++.+.++
T Consensus        16 ~~~~l~~lhg~~-----------g~~~~~----~~la~~L--~~~~v~~---~~~~g~~~----------~a~~~~~~i~   65 (230)
T d1jmkc_          16 QEQIIFAFPPVL-----------GYGLMY----QNLSSRL--PSYKLCA---FDFIEEED----------RLDRYADLIQ   65 (230)
T ss_dssp             CSEEEEEECCTT-----------CCGGGG----HHHHHHC--TTEEEEE---ECCCCSTT----------HHHHHHHHHH
T ss_pred             CCCeEEEEcCCC-----------CCHHHH----HHHHHHC--CCCEEec---cCcCCHHH----------HHHHHHHHHH
Confidence            368999999964           111222    1334444  4798988   44555432          2344444443


Q ss_pred             HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc---eeEEEEccCCCCCCCCccCc-cc--------------ccccc
Q 004475          591 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL---FCCGIARSGSYNKTLTPFGF-QT--------------EFRTL  652 (751)
Q Consensus       591 ~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~---~~~~v~~~~~~d~~~~~~~~-~~--------------~~~~~  652 (751)
                         +..  ...++.|+||||||.+|+.+|.+.|++   +..++...+........... ..              .....
T Consensus        66 ---~~~--~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (230)
T d1jmkc_          66 ---KLQ--PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNS  140 (230)
T ss_dssp             ---HHC--CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGS
T ss_pred             ---HhC--CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhcccccccccc
Confidence               322  235799999999999999999876543   44444444321111000000 00              00000


Q ss_pred             hhhH--------HHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCccc-
Q 004475          653 WEAT--------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE-  723 (751)
Q Consensus       653 ~~~~--------~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-  723 (751)
                      ....        ..+..........++++|+++++|++|..++  ... ....   ......++++.+++ +|..+..+ 
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~--~~~-~~w~---~~~~~~~~~~~i~g-~H~~ml~~~  213 (230)
T d1jmkc_         141 EAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--EWL-ASWE---EATTGAYRMKRGFG-THAEMLQGE  213 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--TTE-ECSG---GGBSSCEEEEECSS-CGGGTTSHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcccccccccCcceeeeecCCcccc--hhH-HHHH---HhccCCcEEEEEcC-CChhhcCCc
Confidence            0000        0011111223345688999999999999886  332 1111   12234678999986 89865432 


Q ss_pred             cHHHHHHHHHHHHH
Q 004475          724 NVMHVIWETDRWLQ  737 (751)
Q Consensus       724 ~~~~~~~~~~~fl~  737 (751)
                      ...+..+.|.+||+
T Consensus       214 ~~~~va~~I~~~L~  227 (230)
T d1jmkc_         214 TLDRNAGILLEFLN  227 (230)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHh
Confidence            23455666666664


No 119
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]}
Probab=98.84  E-value=1.1e-08  Score=101.22  Aligned_cols=83  Identities=16%  Similarity=0.129  Sum_probs=62.2

Q ss_pred             hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475          545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH  624 (751)
Q Consensus       545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~  624 (751)
                      .....|.++||.|++   .+.+|+|.+........++.+++.+.++.+      +.++|.++||||||.++..++.++|+
T Consensus        32 ~~~~~L~~~G~~V~~---~~~~g~g~s~~~~~~~~~l~~~i~~~~~~~------~~~~v~lvGhS~GG~~~~~~~~~~p~  102 (319)
T d1cvla_          32 GIQSDLQSHGAKVYV---ANLSGFQSDDGPNGRGEQLLAYVKQVLAAT------GATKVNLIGHSQGGLTSRYVAAVAPQ  102 (319)
T ss_dssp             THHHHHHHTTCCEEE---CCCBCSSCTTSTTSHHHHHHHHHHHHHHHH------CCSCEEEEEETTHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHCCCEEEE---ecCCCCCCCCCCcccHHHHHHHHHHHHHHh------CCCCEEEEeccccHHHHHHHHHHCcc
Confidence            456788999999999   556677766554444444444444443332      34789999999999999999999999


Q ss_pred             ceeEEEEccCCC
Q 004475          625 LFCCGIARSGSY  636 (751)
Q Consensus       625 ~~~~~v~~~~~~  636 (751)
                      +++.+|+++++.
T Consensus       103 ~v~~vv~i~~p~  114 (319)
T d1cvla_         103 LVASVTTIGTPH  114 (319)
T ss_dssp             GEEEEEEESCCT
T ss_pred             ccceEEEECCCC
Confidence            999999988763


No 120
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.82  E-value=4.6e-07  Score=89.86  Aligned_cols=60  Identities=10%  Similarity=0.063  Sum_probs=36.3

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe--eeccCCCCccccceeeeeEEecCCcEEEEe
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFT  104 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~--~~lt~~~~~~~~~~~~~~~wspDg~~l~~~  104 (751)
                      .+...+|||||++||..+.        +  +.|.+++++++..  ..+.....   ...+..++|+|++..++++
T Consensus        13 ~I~~l~fsp~~~~L~s~s~--------D--g~v~iwd~~~~~~~~~~~~~~~h---~~~V~~v~f~~~~~~~l~s   74 (342)
T d1yfqa_          13 YISDIKIIPSKSLLLITSW--------D--GSLTVYKFDIQAKNVDLLQSLRY---KHPLLCCNFIDNTDLQIYV   74 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEET--------T--SEEEEEEEETTTTEEEEEEEEEC---SSCEEEEEEEESSSEEEEE
T ss_pred             CEEEEEEeCCCCEEEEEEC--------C--CeEEEEEccCCCcceEEEEecCC---CCCEEEEEEeCCCCCEEEE
Confidence            5889999999999998642        3  4555555544332  22211110   1137789999986654444


No 121
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.82  E-value=4e-08  Score=99.62  Aligned_cols=116  Identities=11%  Similarity=0.008  Sum_probs=68.7

Q ss_pred             ecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCC
Q 004475           38 WSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTM  117 (751)
Q Consensus        38 ~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~  117 (751)
                      .+||||+|+. ..        ....+|.++|+++++..++...+...   +...++++|||+++++.........     
T Consensus        79 gtpDGr~lfV-~d--------~~~~rVavIDl~t~k~~~ii~iP~g~---gphgi~~spdg~t~YV~~~~~~~v~-----  141 (441)
T d1qnia2          79 GRYDGKYLFI-ND--------KANTRVARIRLDIMKTDKITHIPNVQ---AIHGLRLQKVPKTNYVFCNAEFVIP-----  141 (441)
T ss_dssp             TEEEEEEEEE-EE--------TTTTEEEEEETTTTEEEEEEECTTCC---CEEEEEECCSSBCCEEEEEECSCEE-----
T ss_pred             ccCCCCEEEE-Ec--------CCCCEEEEEECCCCcEeeEEecCCCC---CccceEEeccCCEEEEEeccCCccc-----
Confidence            4799999844 33        55689999999999877765443211   3567899999997766533211110     


Q ss_pred             CCCCCceeeccccccccchhhhhccCCccchhhhhhh-eeeEEEEEcC-CCC-ceecCCCceEEeeeeCCCCceEEEEEe
Q 004475          118 VPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY-TTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSM  194 (751)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-~G~-~~~lt~~~~~~~~~~SpDG~~i~~~~~  194 (751)
                                                .+.++..+... ....+..+|. +.+ ..++.-......+.++|||+++++++.
T Consensus       142 --------------------------~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~  195 (441)
T d1qnia2         142 --------------------------QPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCY  195 (441)
T ss_dssp             --------------------------SSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEES
T ss_pred             --------------------------ccCcccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEec
Confidence                                      00011111101 1133445666 332 234433355678999999999998876


Q ss_pred             cC
Q 004475          195 HR  196 (751)
Q Consensus       195 ~~  196 (751)
                      +.
T Consensus       196 ns  197 (441)
T d1qnia2         196 NS  197 (441)
T ss_dssp             CT
T ss_pred             CC
Confidence            53


No 122
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.78  E-value=1.7e-06  Score=85.31  Aligned_cols=244  Identities=8%  Similarity=0.017  Sum_probs=127.1

Q ss_pred             eEEEEEcCCC-Ccee-cCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCC
Q 004475          157 AQLVLGSLDG-TAKD-FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI  233 (751)
Q Consensus       157 ~~l~~~~~~G-~~~~-lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  233 (751)
                      ..|++++.+| +... +... .....++++|||+.++ .....        ......+...+..++....+......   
T Consensus        61 g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~v-a~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~---  128 (319)
T d2dg1a1          61 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFV-CYLGD--------FKSTGGIFAATENGDNLQDIIEDLST---  128 (319)
T ss_dssp             CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEE-EECTT--------SSSCCEEEEECTTSCSCEEEECSSSS---
T ss_pred             CEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEE-EecCC--------CccceeEEEEcCCCceeeeeccCCCc---
Confidence            5789999865 3332 3333 5567899999997544 33221        01124567777777655544322111   


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceE
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLAL  312 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l  312 (751)
                             ......+.+.|||+  +++.....     ......+.+++++.+   ++..+.+...-.... ++|+||++.|
T Consensus       129 -------~~~~nd~~~d~~G~--l~vtd~~~-----~~~~~~g~v~~~~~d---g~~~~~~~~~~~~pnGia~s~dg~~l  191 (319)
T d2dg1a1         129 -------AYCIDDMVFDSKGG--FYFTDFRG-----YSTNPLGGVYYVSPD---FRTVTPIIQNISVANGIALSTDEKVL  191 (319)
T ss_dssp             -------CCCEEEEEECTTSC--EEEEECCC-----BTTBCCEEEEEECTT---SCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred             -------ccCCcceeEEeccc--eeeccccc-----ccccCcceeEEEecc---cceeEEEeeccceeeeeeeccccceE
Confidence                   11234689999996  56654211     112234578888875   555555544333334 8999999988


Q ss_pred             EEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCC
Q 004475          313 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN  392 (751)
Q Consensus       313 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (751)
                      +++.   ....+|++++++.......................--+++.+||+ |++...                    .
T Consensus       192 yvad---~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~-l~Va~~--------------------~  247 (319)
T d2dg1a1         192 WVTE---TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMY--------------------G  247 (319)
T ss_dssp             EEEE---GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEE--------------------T
T ss_pred             EEec---ccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCC-EEEEEc--------------------C
Confidence            7765   234578888775431111111100000000000000155667775 333331                    1


Q ss_pred             CceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCC--CCCeEEEEEcC
Q 004475          393 IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT--EITQYHILSWP  459 (751)
Q Consensus       393 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--~~~~l~~~~~~  459 (751)
                      ...|.++|.+ |+....+..+.. .    .........+++.+++..++.+.....  ..+.||.++..
T Consensus       248 ~g~V~~~~p~-G~~l~~i~~P~~-~----~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~l~~~~~~  310 (319)
T d2dg1a1         248 QGRVLVFNKR-GYPIGQILIPGR-D----EGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF  310 (319)
T ss_dssp             TTEEEEECTT-SCEEEEEECTTG-G----GTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred             CCEEEEECCC-CcEEEEEeCCCc-C----CCcCceeeeEEEeCCCCEEEEEcCCCCcCCceeEEEEeCC
Confidence            2378888874 554433333221 0    000011223677888888877765433  33458888764


No 123
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.78  E-value=9.8e-07  Score=91.22  Aligned_cols=282  Identities=13%  Similarity=0.039  Sum_probs=145.2

Q ss_pred             cceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCC
Q 004475           34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP  113 (751)
Q Consensus        34 ~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~  113 (751)
                      ...++||||++|||....     .++....|+++|+++|+....+-...     ....++|++|++.|+|+.........
T Consensus       128 ~~~~~Spd~~~la~s~d~-----~G~e~~~l~v~Dl~tg~~~~~~i~~~-----~~~~~~W~~D~~~~~Y~~~~~~~~~~  197 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSA-----SGSDWVTIKFMKVDGAKELPDVLERV-----KFSCMAWTHDGKGMFYNAYPQQDGKS  197 (430)
T ss_dssp             EEEEECTTSSEEEEEEEE-----TTCSCEEEEEEETTTTEEEEEEEEEE-----CSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred             cceEecCCCCEEEEEecc-----ccCchheeEEeccCcceecccccccc-----cccceEEcCCCCEEEEEEeccccCcc
Confidence            356899999999998753     23566899999999998554321110     12567999999999998654322210


Q ss_pred             CCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC--CceecCCC----ceEEeeeeCCCC
Q 004475          114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP----AVYTAVEPSPDQ  186 (751)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G--~~~~lt~~----~~~~~~~~SpDG  186 (751)
                      .....                                 ...+..++|+..+ +.  +.+.+-..    ..+.....|+||
T Consensus       198 ~~~~~---------------------------------~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~  244 (430)
T d1qfma1         198 DGTET---------------------------------STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG  244 (430)
T ss_dssp             SSSCC---------------------------------CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS
T ss_pred             ccccc---------------------------------ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCc
Confidence            00000                                 0001146777777 44  22233221    345577889999


Q ss_pred             ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475          187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG  266 (751)
Q Consensus       187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~  266 (751)
                      +++++.......        ....++..++..............     .+......... ....+|.. +++.+..   
T Consensus       245 ~~l~i~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~-~~~~Tn~---  306 (430)
T d1qfma1         245 RYVLLSIREGCD--------PVNRLWYCDLQQESNGITGILKWV-----KLIDNFEGEYD-YVTNEGTV-FTFKTNR---  306 (430)
T ss_dssp             CEEEEEEECSSS--------SCCEEEEEEGGGSSSSSCSSCCCE-----EEECSSSSCEE-EEEEETTE-EEEEECT---
T ss_pred             ceeeEEeeccCC--------ccEEEEEeeCCCccccccccccee-----EeecccccceE-EEecCCce-eecccCc---
Confidence            999886654221        124577777653221110000000     00000001111 12335555 3443311   


Q ss_pred             CCccccCcccceeeccCCCCCCCCceEeE-eeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecc
Q 004475          267 DANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV  344 (751)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~  344 (751)
                           ...+..|+.++++.......+.+. ..+.... -..+..+.+|+.... .....+|.++++.++  ....+....
T Consensus       307 -----~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~-~~~~~~l~v~~~~~~--~~~~~~~~~  378 (430)
T d1qfma1         307 -----HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL-HDVKNTLQLHDLATG--ALLKIFPLE  378 (430)
T ss_dssp             -----TCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE-ETTEEEEEEEETTTC--CEEEEECCC
T ss_pred             -----ccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEE-cCCEeEEEEEECCCC--cEEEecCCC
Confidence                 123467888887532222334443 3344343 344555566665543 345578999998885  333343222


Q ss_pred             cccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCcee
Q 004475          345 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE  407 (751)
Q Consensus       345 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~  407 (751)
                      ...+..      ...+++...+.|...              +   -.....++.+|+++|+.+
T Consensus       379 ~~sv~~------~~~~~~~~~~~~~~s--------------s---~~tP~~~y~~Dl~t~~~~  418 (430)
T d1qfma1         379 VGSVVG------YSGQKKDTEIFYQFT--------------S---FLSPGIIYHCDLTKEELE  418 (430)
T ss_dssp             SSEEEE------EECCTTCSEEEEEEE--------------C---SSCCCEEEEEETTSSSCC
T ss_pred             CceEee------ccCCCCCCEEEEEEc--------------C---CCCCCeEEEEECCCCCcc
Confidence            211111      223344444544431              1   134568999999998764


No 124
>d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]}
Probab=98.76  E-value=5.8e-08  Score=96.63  Aligned_cols=63  Identities=21%  Similarity=0.145  Sum_probs=49.4

Q ss_pred             cCCCCCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC-CCCCcCCccccHHHHHHHHHHHHH
Q 004475          668 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       668 ~~~~~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      +.+|++|+|++..+.|.+.|  +++.+++.+.++    ..++.+++ ..||.-. .-+.+.+...+.+||+
T Consensus       312 L~~I~a~~LvI~~~sD~lFP--p~~~~e~a~~l~----~a~~~~I~S~~GHDaF-L~e~~~~~~~I~~FL~  375 (376)
T d2vata1         312 LAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLD  375 (376)
T ss_dssp             HTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHT
T ss_pred             HhhCCCCEEEEEeCcccCcC--HHHHHHHHHhcC----CCeEEEECCCCCcccc-ccCHHHHHHHHHHHHc
Confidence            67899999999999999999  999999888875    45788887 5578632 2335667777888875


No 125
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]}
Probab=98.76  E-value=1.8e-08  Score=97.88  Aligned_cols=83  Identities=10%  Similarity=-0.106  Sum_probs=63.9

Q ss_pred             hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC-
Q 004475          545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP-  623 (751)
Q Consensus       545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p-  623 (751)
                      .+...|+++||.|+.++   +.|+|..     ......+++...|+++.+...  .+||.|+||||||.++.+++.++| 
T Consensus        51 ~~~~~L~~~Gy~v~~~d---~~g~g~~-----d~~~sae~la~~i~~v~~~~g--~~kV~lVGhS~GG~~a~~~l~~~p~  120 (317)
T d1tcaa_          51 NWIPLSTQLGYTPCWIS---PPPFMLN-----DTQVNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPS  120 (317)
T ss_dssp             THHHHHHTTTCEEEEEC---CTTTTCS-----CHHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHhCCCeEEEec---CCCCCCC-----chHhHHHHHHHHHHHHHHhcc--CCceEEEEeCchHHHHHHHHHHCCC
Confidence            45678899999999844   4454432     234556778888999887643  368999999999999999999887 


Q ss_pred             --CceeEEEEccCCCC
Q 004475          624 --HLFCCGIARSGSYN  637 (751)
Q Consensus       624 --~~~~~~v~~~~~~d  637 (751)
                        +++..+|.+++.+.
T Consensus       121 ~~~~V~~~v~i~~~~~  136 (317)
T d1tcaa_         121 IRSKVDRLMAFAPDYK  136 (317)
T ss_dssp             GTTTEEEEEEESCCTT
T ss_pred             cchheeEEEEeCCCCC
Confidence              46899999998654


No 126
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.76  E-value=2.3e-06  Score=85.17  Aligned_cols=283  Identities=9%  Similarity=0.000  Sum_probs=146.4

Q ss_pred             eecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCC
Q 004475           37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT  116 (751)
Q Consensus        37 ~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  116 (751)
                      .+++||++||..+          ..+.|.++|+.+++......+...    .+..++|+|++ .|+..+.+         
T Consensus        18 c~~~~~~~l~tgs----------~Dg~i~vWd~~~~~~~~~l~~H~~----~V~~l~~s~~~-~l~s~s~D---------   73 (355)
T d1nexb2          18 CLQFEDNYVITGA----------DDKMIRVYDSINKKFLLQLSGHDG----GVWALKYAHGG-ILVSGSTD---------   73 (355)
T ss_dssp             EEEEETTEEEEEE----------TTTEEEEEETTTTEEEEEEECCSS----CEEEEEEETTT-EEEEEETT---------
T ss_pred             EEEECCCEEEEEe----------CCCeEEEEECCCCcEEEEEECCCC----CEEEEEEcCCC-EEEEEecc---------
Confidence            5888999888743          336788889988875443332221    47889999976 56555332         


Q ss_pred             CCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCc-eecCCC---ceEEeeeeCCCCceEEE
Q 004475          117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP---AVYTAVEPSPDQKYVLI  191 (751)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~-~~lt~~---~~~~~~~~SpDG~~i~~  191 (751)
                                                              ..|.+++. .++. ......   .......++++++.++.
T Consensus        74 ----------------------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (355)
T d1nexb2          74 ----------------------------------------RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT  113 (355)
T ss_dssp             ----------------------------------------CCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEE
T ss_pred             ----------------------------------------cccccccccccccccccccccccccccccccccccceeee
Confidence                                                    34555666 3322 112111   33456778899998887


Q ss_pred             EEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC----CC----CccCCc-cCCCceeeeecCCCceEEEEEe
Q 004475          192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IP----VCYNSV-REGMRSISWRADKPSTLYWVEA  262 (751)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~----~~~~~~-~~~~~~~~~spdG~~~i~~~~~  262 (751)
                      ...+             ..+.+|++.+..............    .+    ...... .....-..+.++|+. ++... 
T Consensus       114 ~~~d-------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~-  178 (355)
T d1nexb2         114 GSRD-------------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI-VVSGS-  178 (355)
T ss_dssp             EETT-------------SEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTE-EEEEE-
T ss_pred             ecCC-------------CcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccce-eeeec-
Confidence            6543             357788887553221111000000    00    000000 001112355667765 44332 


Q ss_pred             ccCCCCccccCcccceeeccCCCCCCCC-ceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceee
Q 004475          263 QDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL  340 (751)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l  340 (751)
                                 ....+.++++.   ... ............ ..|+|+++.++....    ...|.+.+..++  .....
T Consensus       179 -----------~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~i~i~d~~~~--~~~~~  238 (355)
T d1nexb2         179 -----------YDNTLIVWDVA---QMKCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIWDLENG--ELMYT  238 (355)
T ss_dssp             -----------TTSCEEEEETT---TTEEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEEETTTC--CEEEE
T ss_pred             -----------ccceeeeeecc---cccceeeeeccccccccccccccceeeecccc----cceEEeeecccc--ccccc
Confidence                       22467777764   222 222223344445 889999998887652    235667777664  22222


Q ss_pred             eecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhc
Q 004475          341 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET  420 (751)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~  420 (751)
                      .......+        .+.+.+++.|+..+.+                     ..|++||+.++..........      
T Consensus       239 ~~~h~~~v--------~~~~~~~~~l~~~~~d---------------------g~i~iwd~~~~~~~~~~~~~~------  283 (355)
T d1nexb2         239 LQGHTALV--------GLLRLSDKFLVSAAAD---------------------GSIRGWDANDYSRKFSYHHTN------  283 (355)
T ss_dssp             ECCCSSCC--------CEEEECSSEEEEECTT---------------------SEEEEEETTTCCEEEEEECTT------
T ss_pred             cccccccc--------cccccccceeeeeecc---------------------cccccccccccceecccccCC------
Confidence            22211111        2234456677766622                     378899998765433222211      


Q ss_pred             eeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 004475          421 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS  464 (751)
Q Consensus       421 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~  464 (751)
                      +..      ...++++++.++ +..    -..|.++|+.+|+..
T Consensus       284 ~~~------~~~~~~~~~~l~-~g~----d~~i~vwd~~tg~~~  316 (355)
T d1nexb2         284 LSA------ITTFYVSDNILV-SGS----ENQFNIYNLRSGKLV  316 (355)
T ss_dssp             CCC------CCEEEECSSEEE-EEE----TTEEEEEETTTCCBC
T ss_pred             ceE------EEEEcCCCCEEE-EEe----CCEEEEEECCCCCEE
Confidence            111      124566666444 432    246999999988753


No 127
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.75  E-value=2e-06  Score=84.16  Aligned_cols=246  Identities=13%  Similarity=0.134  Sum_probs=130.0

Q ss_pred             CcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCc
Q 004475           20 PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNST   99 (751)
Q Consensus        20 ~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~   99 (751)
                      +.+.++.+|.+.....++++|||+ |+++.         .....||.++.++ +.+.+.....     ....++|+|||+
T Consensus        17 ~~~v~~~~p~~~~~e~iAv~pdG~-l~vt~---------~~~~~I~~i~p~g-~~~~~~~~~~-----~~~gla~~~dG~   80 (302)
T d2p4oa1          17 PAKIITSFPVNTFLENLASAPDGT-IFVTN---------HEVGEIVSITPDG-NQQIHATVEG-----KVSGLAFTSNGD   80 (302)
T ss_dssp             CEEEEEEECTTCCEEEEEECTTSC-EEEEE---------TTTTEEEEECTTC-CEEEEEECSS-----EEEEEEECTTSC
T ss_pred             cccEEEECCCCCCcCCEEECCCCC-EEEEe---------CCCCEEEEEeCCC-CEEEEEcCCC-----CcceEEEcCCCC
Confidence            344456667766677899999997 54543         3457899999764 4555544443     357889999998


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC---CCCceecCC---
Q 004475          100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL---DGTAKDFGT---  173 (751)
Q Consensus       100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~G~~~~lt~---  173 (751)
                      . ++.....                                                ..++.++.   ++....+..   
T Consensus        81 l-~v~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~  111 (302)
T d2p4oa1          81 L-VATGWNA------------------------------------------------DSIPVVSLVKSDGTVETLLTLPD  111 (302)
T ss_dssp             E-EEEEECT------------------------------------------------TSCEEEEEECTTSCEEEEEECTT
T ss_pred             e-EEEecCC------------------------------------------------ceEEEEEecccccceeeccccCC
Confidence            4 4432211                                                12233332   344443322   


Q ss_pred             CceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCC
Q 004475          174 PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK  253 (751)
Q Consensus       174 ~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG  253 (751)
                      ......+++.+||+. ++....            ...++.++..++........+...  +............+  ++|+
T Consensus       112 ~~~~n~i~~~~~g~~-~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ngi--~~~~  174 (302)
T d2p4oa1         112 AIFLNGITPLSDTQY-LTADSY------------RGAIWLIDVVQPSGSIWLEHPMLA--RSNSESVFPAANGL--KRFG  174 (302)
T ss_dssp             CSCEEEEEESSSSEE-EEEETT------------TTEEEEEETTTTEEEEEEECGGGS--CSSTTCCSCSEEEE--EEET
T ss_pred             ccccceeEEccCCCE-Eeeccc------------cccceeeeccCCcceeEecCCccc--eeeccCcccccccc--cccC
Confidence            245668889999964 443222            346788888776544332221000  00000111112233  4456


Q ss_pred             CceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475          254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       254 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                      .+ ++++..           ....|+.++.+.................. +++++||+ |+++..   ...+|++++.++
T Consensus       175 ~~-l~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~-l~va~~---~~~~V~~i~p~G  238 (302)
T d2p4oa1         175 NF-LYVSNT-----------EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN-LYGATH---IYNSVVRIAPDR  238 (302)
T ss_dssp             TE-EEEEET-----------TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-EEEECB---TTCCEEEECTTC
T ss_pred             Cc-eeeecC-----------CCCeEEeccccccccccccccccCCCCCcceEECCCCC-EEEEEc---CCCcEEEECCCC
Confidence            66 666541           23578888875211111111222222233 89999998 554442   235799998877


Q ss_pred             CCCcceeeeecccccccCCCCCCCeee---CCCCCEEEEee
Q 004475          333 KDVAPRVLFDRVFENVYSDPGSPMMTR---TSTGTNVIAKI  370 (751)
Q Consensus       333 ~~~~~~~l~~~~~~~~~~~~~~~~~~~---spDG~~l~~~~  370 (751)
                      +   ...+...... ..   +.-..+|   ++|++.|++..
T Consensus       239 ~---~~~~~~~~~~-~~---~pt~vafg~~~~D~~~Lyvtt  272 (302)
T d2p4oa1         239 S---TTIIAQAEQG-VI---GSTAVAFGQTEGDCTAIYVVT  272 (302)
T ss_dssp             C---EEEEECGGGT-CT---TEEEEEECCSTTTTTEEEEEE
T ss_pred             C---EEEEEecCCC-CC---CceEEEEcCCCCCCCEEEEEC
Confidence            3   2223221111 00   0111567   78999888776


No 128
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.68  E-value=3.5e-06  Score=83.04  Aligned_cols=239  Identities=11%  Similarity=0.034  Sum_probs=131.8

Q ss_pred             ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeecc-CCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF-ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt-~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      ...|+|.+||+ |+|+.         .....|+.+++++++..... ....     ....++++|||+.++......+  
T Consensus        42 lEG~~~D~~G~-Ly~~D---------~~~g~I~ri~p~g~~~~~~~~~~~~-----~p~gla~~~dG~l~va~~~~~~--  104 (319)
T d2dg1a1          42 LEGLNFDRQGQ-LFLLD---------VFEGNIFKINPETKEIKRPFVSHKA-----NPAAIKIHKDGRLFVCYLGDFK--  104 (319)
T ss_dssp             EEEEEECTTSC-EEEEE---------TTTCEEEEECTTTCCEEEEEECSSS-----SEEEEEECTTSCEEEEECTTSS--
T ss_pred             cEeCEECCCCC-EEEEE---------CCCCEEEEEECCCCeEEEEEeCCCC-----CeeEEEECCCCCEEEEecCCCc--
Confidence            35789999996 77753         34478999998887654432 2222     2467899999975443211100  


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCCC----ceEEeeeeCCCC
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPSPDQ  186 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~~----~~~~~~~~SpDG  186 (751)
                                                                 ....++.++.++ ....+...    ....++++.|||
T Consensus       105 -------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G  141 (319)
T d2dg1a1         105 -------------------------------------------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG  141 (319)
T ss_dssp             -------------------------------------------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS
T ss_pred             -------------------------------------------cceeEEEEcCCCceeeeeccCCCcccCCcceeEEecc
Confidence                                                       114677777744 44333222    345578999999


Q ss_pred             ceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCC
Q 004475          187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG  266 (751)
Q Consensus       187 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~  266 (751)
                      + |+++.....      .......+++++.+++..+.+...-             .....++|+|||+. |+++..    
T Consensus       142 ~-l~vtd~~~~------~~~~~g~v~~~~~dg~~~~~~~~~~-------------~~pnGia~s~dg~~-lyvad~----  196 (319)
T d2dg1a1         142 G-FYFTDFRGY------STNPLGGVYYVSPDFRTVTPIIQNI-------------SVANGIALSTDEKV-LWVTET----  196 (319)
T ss_dssp             C-EEEEECCCB------TTBCCEEEEEECTTSCCEEEEEEEE-------------SSEEEEEECTTSSE-EEEEEG----
T ss_pred             c-eeecccccc------cccCcceeEEEecccceeEEEeecc-------------ceeeeeeeccccce-EEEecc----
Confidence            6 666643321      1111356889999887665542210             12347899999998 777652    


Q ss_pred             CCccccCcccceeeccCCCCCCCCceEeEe----e---ceeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcce
Q 004475          267 DANVEVSPRDIIYTQPAEPAEGEKPEILHK----L---DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR  338 (751)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~----~---~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~  338 (751)
                             ..++|+.++++ .++........    .   ..... +++.++|+ |+.+. .  ....|++++.++.  ...
T Consensus       197 -------~~~~I~~~d~~-~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~-l~Va~-~--~~g~V~~~~p~G~--~l~  262 (319)
T d2dg1a1         197 -------TANRLHRIALE-DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAM-Y--GQGRVLVFNKRGY--PIG  262 (319)
T ss_dssp             -------GGTEEEEEEEC-TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEE-E--TTTEEEEECTTSC--EEE
T ss_pred             -------cCCceEEEEEc-CCCceeccccceeeeccCCccceeeeeEcCCCC-EEEEE-c--CCCEEEEECCCCc--EEE
Confidence                   23578888874 22222211111    0   11123 67788887 43333 1  2358999998763  111


Q ss_pred             eeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475          339 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK  371 (751)
Q Consensus       339 ~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~  371 (751)
                      .+ ...............++|.+++..++..+.
T Consensus       263 ~i-~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         263 QI-LIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EE-ECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             EE-eCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            12 111110000001111668888877776663


No 129
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.67  E-value=6.5e-06  Score=80.69  Aligned_cols=234  Identities=10%  Similarity=0.084  Sum_probs=125.3

Q ss_pred             eEEEEEcC-CCCceecCCC------ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCC
Q 004475          157 AQLVLGSL-DGTAKDFGTP------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP  229 (751)
Q Consensus       157 ~~l~~~~~-~G~~~~lt~~------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~  229 (751)
                      .+|+++++ +++...+..+      .....+.+++||+.|++...             ...+.+++.+++....+.....
T Consensus        46 g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~-------------~~~i~~~~~~g~~~~~~~~~~~  112 (314)
T d1pjxa_          46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------------RLGLLVVQTDGTFEEIAKKDSE  112 (314)
T ss_dssp             CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------------TTEEEEEETTSCEEECCSBCTT
T ss_pred             CEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEEC-------------CCeEEEEeCCCcEEEEEecccc
Confidence            57999999 4544433222      22457899999998887632             2247888998875544322111


Q ss_pred             CCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCC----CccccCcccceeeccCCCCCCCCceEeEeeceeEE-EE
Q 004475          230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD----ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VS  304 (751)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~  304 (751)
                        ..+  +    ..+..+.+.|||+  |+++.......    ........+.||+++.+   + ....+...-..-. ++
T Consensus       113 --g~~--~----~~pndl~~d~~G~--lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d---g-~~~~~~~~~~~pNGi~  178 (314)
T d1pjxa_         113 --GRR--M----QGCNDCAFDYEGN--LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD---G-QMIQVDTAFQFPNGIA  178 (314)
T ss_dssp             --SCB--C----BCCCEEEECTTSC--EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT---S-CEEEEEEEESSEEEEE
T ss_pred             --ccc--c----CCCcEEEECCCCC--EEEecCccCcccccccceeccCCceEEEEeec---C-ceeEeeCCcceeeeeE
Confidence              000  0    1234689999996  67764321110    01111233578888875   4 3333333222223 78


Q ss_pred             EecCCc----eEEEeeeecccceeEEEecCCCCCCcc--eee-eecccccccCCCCCC-CeeeCCCCCEEEEeeeecCCc
Q 004475          305 WCDDSL----ALVNETWYKTSQTRTWLVCPGSKDVAP--RVL-FDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDE  376 (751)
Q Consensus       305 ~spdg~----~l~~~~~~~~~~~~l~~~~~~~~~~~~--~~l-~~~~~~~~~~~~~~~-~~~~spDG~~l~~~~~~~~~~  376 (751)
                      |+||+.    .|+++.   ....+||+++++.. +..  +.+ ........    +.| -+++.++|+ |++...     
T Consensus       179 ~~~d~d~~~~~lyv~d---~~~~~i~~~d~~~~-g~~~~~~~~~~~~~~~~----~~pdGiavD~~Gn-lyVa~~-----  244 (314)
T d1pjxa_         179 VRHMNDGRPYQLIVAE---TPTKKLWSYDIKGP-AKIENKKVWGHIPGTHE----GGADGMDFDEDNN-LLVANW-----  244 (314)
T ss_dssp             EEECTTSCEEEEEEEE---TTTTEEEEEEEEET-TEEEEEEEEEECCCCSS----CEEEEEEEBTTCC-EEEEEE-----
T ss_pred             ECCCCCcceeEEEEEe---ecccceEEeeccCc-cccceeeEEEEcccccc----ccceeeEEecCCc-EEEEEc-----
Confidence            998865    344432   34468888876543 111  111 11111000    000 155667775 333331     


Q ss_pred             ceEEEEccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEE
Q 004475          377 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL  456 (751)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~  456 (751)
                                     ....|+++|.++++.......+..           ....++|.+|+++|+++...   ...||++
T Consensus       245 ---------------~~g~I~~~dp~~g~~~~~i~~p~~-----------~~t~~afg~d~~~lyVt~~~---~g~i~~~  295 (314)
T d1pjxa_         245 ---------------GSSHIEVFGPDGGQPKMRIRCPFE-----------KPSNLHFKPQTKTIFVTEHE---NNAVWKF  295 (314)
T ss_dssp             ---------------TTTEEEEECTTCBSCSEEEECSSS-----------CEEEEEECTTSSEEEEEETT---TTEEEEE
T ss_pred             ---------------CCCEEEEEeCCCCEEEEEEECCCC-----------CEEEEEEeCCCCEEEEEECC---CCcEEEE
Confidence                           123789999887765443333211           12236889999988877532   4679999


Q ss_pred             EcCC
Q 004475          457 SWPL  460 (751)
Q Consensus       457 ~~~~  460 (751)
                      ++.-
T Consensus       296 ~~~~  299 (314)
T d1pjxa_         296 EWQR  299 (314)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            8654


No 130
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.66  E-value=3.3e-06  Score=84.97  Aligned_cols=72  Identities=13%  Similarity=0.069  Sum_probs=40.2

Q ss_pred             CceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe----e-ceeEE-EEEecCCceEEEeee
Q 004475          244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK----L-DLRFS-VSWCDDSLALVNETW  317 (751)
Q Consensus       244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~----~-~~~~~-~~~spdg~~l~~~~~  317 (751)
                      +.++.|+|||++ ++.+..           ..+.|++++.+ .++ .......    . ..... +.|+|||+.++...+
T Consensus       147 ~h~v~~sPdG~~-l~v~d~-----------g~d~v~~~~~~-~~g-~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e  212 (365)
T d1jofa_         147 IHGMVFDPTETY-LYSADL-----------TANKLWTHRKL-ASG-EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME  212 (365)
T ss_dssp             EEEEEECTTSSE-EEEEET-----------TTTEEEEEEEC-TTS-CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred             ceEEEECCCCCE-EEEeeC-----------CCCEEEEEEcc-CCC-ceeeccceeecCCCCceEEEEECCCCceEEEecc
Confidence            458999999998 565431           22456666653 112 2222111    1 11233 889999997766552


Q ss_pred             ecccceeEEEecCCC
Q 004475          318 YKTSQTRTWLVCPGS  332 (751)
Q Consensus       318 ~~~~~~~l~~~~~~~  332 (751)
                      .   ...|..++.+.
T Consensus       213 ~---~~~V~v~~~~~  224 (365)
T d1jofa_         213 A---GNRICEYVIDP  224 (365)
T ss_dssp             T---TTEEEEEEECT
T ss_pred             C---CCEEEEEEecC
Confidence            2   34565555544


No 131
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.63  E-value=4.9e-06  Score=81.31  Aligned_cols=220  Identities=13%  Similarity=0.057  Sum_probs=113.5

Q ss_pred             eEEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCC--CceeeeeccCCCCCCC
Q 004475          157 AQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVRELCDLPPAEDI  233 (751)
Q Consensus       157 ~~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l~~~~~~~~~  233 (751)
                      ..|++++.+|+.+.+... .....++|+|||+ |++.....            ..+++++..  .+....+...+..   
T Consensus        49 ~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~-l~v~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~---  112 (302)
T d2p4oa1          49 GEIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWNA------------DSIPVVSLVKSDGTVETLLTLPDA---  112 (302)
T ss_dssp             TEEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEECT------------TSCEEEEEECTTSCEEEEEECTTC---
T ss_pred             CEEEEEeCCCCEEEEEcCCCCcceEEEcCCCC-eEEEecCC------------ceEEEEEecccccceeeccccCCc---
Confidence            589999998876665544 6778999999998 44443321            123444433  2333333332211   


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee--------cee-EE-E
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--------DLR-FS-V  303 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--------~~~-~~-~  303 (751)
                              .....+.+.+||+  +++...           ....++.++..   +.........        ... .. -
T Consensus       113 --------~~~n~i~~~~~g~--~~v~~~-----------~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~n  168 (302)
T d2p4oa1         113 --------IFLNGITPLSDTQ--YLTADS-----------YRGAIWLIDVV---QPSGSIWLEHPMLARSNSESVFPAAN  168 (302)
T ss_dssp             --------SCEEEEEESSSSE--EEEEET-----------TTTEEEEEETT---TTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred             --------cccceeEEccCCC--EEeecc-----------ccccceeeecc---CCcceeEecCCccceeeccCcccccc
Confidence                    1134678899986  444321           22456666553   2211111110        011 11 2


Q ss_pred             EEecCCceEEEeeeecccceeEEEecCCCCCCc--ceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEE
Q 004475          304 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA--PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL  381 (751)
Q Consensus       304 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~  381 (751)
                      ..+.|+..+++..   ....+||+++.+.....  .........  ...      +++++||+ |++...          
T Consensus       169 gi~~~~~~l~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~--pdg------ia~d~dG~-l~va~~----------  226 (302)
T d2p4oa1         169 GLKRFGNFLYVSN---TEKMLLLRIPVDSTDKPGEPEIFVEQTN--IDD------FAFDVEGN-LYGATH----------  226 (302)
T ss_dssp             EEEEETTEEEEEE---TTTTEEEEEEBCTTSCBCCCEEEEESCC--CSS------EEEBTTCC-EEEECB----------
T ss_pred             cccccCCceeeec---CCCCeEEeccccccccccccccccCCCC--Ccc------eEECCCCC-EEEEEc----------
Confidence            3345667777755   33468898887764111  111111111  111      88999997 444441          


Q ss_pred             EccCCCCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceee---ccCCCEEEEEEec--------CCCC
Q 004475          382 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI---NLNQLKILTSKES--------KTEI  450 (751)
Q Consensus       382 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~--------~~~~  450 (751)
                                ....|++++.+ |+...+......         ...+..++|   ++|++.|+++...        ...+
T Consensus       227 ----------~~~~V~~i~p~-G~~~~~~~~~~~---------~~~pt~vafg~~~~D~~~Lyvtt~~g~~~~~~~~~~~  286 (302)
T d2p4oa1         227 ----------IYNSVVRIAPD-RSTTIIAQAEQG---------VIGSTAVAFGQTEGDCTAIYVVTNGGMFLPPPTGVVP  286 (302)
T ss_dssp             ----------TTCCEEEECTT-CCEEEEECGGGT---------CTTEEEEEECCSTTTTTEEEEEECTTSSSCCTTCCCC
T ss_pred             ----------CCCcEEEECCC-CCEEEEEecCCC---------CCCceEEEEcCCCCCCCEEEEECCCCccCCCcCCcCC
Confidence                      12368888885 555555443321         111123467   7788988876533        2234


Q ss_pred             CeEEEEEc
Q 004475          451 TQYHILSW  458 (751)
Q Consensus       451 ~~l~~~~~  458 (751)
                      +.++.+++
T Consensus       287 ~~~~~~~~  294 (302)
T d2p4oa1         287 ANVVRLEV  294 (302)
T ss_dssp             EEEEEEEC
T ss_pred             CeEEEEeC
Confidence            55666664


No 132
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62  E-value=2.3e-05  Score=77.11  Aligned_cols=158  Identities=14%  Similarity=-0.024  Sum_probs=83.7

Q ss_pred             eeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCC-ceEeEeeceeEEEEEecCCceEEEeeeeccccee
Q 004475          246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFSVSWCDDSLALVNETWYKTSQTR  324 (751)
Q Consensus       246 ~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~~~~  324 (751)
                      ...+++|++. ++..+            ..+.|.++++.   ... ...+......+. .++++++.|+..+.    ...
T Consensus       180 ~~~~~~~~~~-l~s~~------------~dg~i~~~d~~---~~~~~~~~~~~~~~v~-~~~~~~~~l~s~s~----d~~  238 (342)
T d2ovrb2         180 VYSLQFDGIH-VVSGS------------LDTSIRVWDVE---TGNCIHTLTGHQSLTS-GMELKDNILVSGNA----DST  238 (342)
T ss_dssp             EEEEEECSSE-EEEEE------------TTSCEEEEETT---TCCEEEEECCCCSCEE-EEEEETTEEEEEET----TSC
T ss_pred             cccccCCCCE-EEEEe------------CCCeEEEeecc---cceeeeEeccccccee-EEecCCCEEEEEcC----CCE
Confidence            4577888887 55443            23578888875   222 222222233333 44556677766542    235


Q ss_pred             EEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCC
Q 004475          325 TWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG  404 (751)
Q Consensus       325 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g  404 (751)
                      |.+.+.... .....+.......      ....+++++++.++..+.+                     ..|++||+.+|
T Consensus       239 i~iwd~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~s~s~D---------------------g~i~iwd~~tg  290 (342)
T d2ovrb2         239 VKIWDIKTG-QCLQTLQGPNKHQ------SAVTCLQFNKNFVITSSDD---------------------GTVKLWDLKTG  290 (342)
T ss_dssp             EEEEETTTC-CEEEEECSTTSCS------SCEEEEEECSSEEEEEETT---------------------SEEEEEETTTC
T ss_pred             EEEEecccc-cccccccccceee------eceeecccCCCeeEEEcCC---------------------CEEEEEECCCC
Confidence            666666653 1112222111111      1114466777777776622                     37999999998


Q ss_pred             ceeEEeec-cchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcC
Q 004475          405 SKERIWES-NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP  459 (751)
Q Consensus       405 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~  459 (751)
                      +..+.... ........+       ..++||||+..++......+.-..|+++|++
T Consensus       291 ~~i~~~~~~~~~~~~~~v-------~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         291 EFIRNLVTLESGGSGGVV-------WRIRASNTKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             CEEEEEEECTTGGGTCEE-------EEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             CEEEEEecccCCCCCCCE-------EEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence            87543322 110000011       1258899987665544343445678888875


No 133
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.60  E-value=2.5e-08  Score=101.14  Aligned_cols=209  Identities=7%  Similarity=-0.032  Sum_probs=108.9

Q ss_pred             eEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCc
Q 004475          176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS  255 (751)
Q Consensus       176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~  255 (751)
                      .......+||||+|++....            +.+|-++|+++.+..++...+..           .++.++.++|||++
T Consensus        73 ~~s~t~gtpDGr~lfV~d~~------------~~rVavIDl~t~k~~~ii~iP~g-----------~gphgi~~spdg~t  129 (441)
T d1qnia2          73 HISMTDGRYDGKYLFINDKA------------NTRVARIRLDIMKTDKITHIPNV-----------QAIHGLRLQKVPKT  129 (441)
T ss_dssp             EEEEETTEEEEEEEEEEETT------------TTEEEEEETTTTEEEEEEECTTC-----------CCEEEEEECCSSBC
T ss_pred             CcceecccCCCCEEEEEcCC------------CCEEEEEECCCCcEeeEEecCCC-----------CCccceEEeccCCE
Confidence            44456678999999887543            45788999998877665443322           34557899999998


Q ss_pred             eEEEEEeccCCCC-----ccc-cCcccceeeccCCCCCCCCc-eEeEeeceeEE-EEEecCCceEEEeeeecccceeEEE
Q 004475          256 TLYWVEAQDRGDA-----NVE-VSPRDIIYTQPAEPAEGEKP-EILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWL  327 (751)
Q Consensus       256 ~i~~~~~~~~~~~-----~~~-~~~~~~l~~~~~~~~~~~~~-~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~  327 (751)
                      +.+++..+.....     ... ......+..+|.+   .... .++ ...+... +.++|||++++.++...+.   +..
T Consensus       130 ~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~---t~~v~~qI-~v~~~p~~v~~spdGk~a~vt~~nse~---~~~  202 (441)
T d1qnia2         130 NYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAE---TMDVAWQV-IVDGNLDNTDADYTGKYATSTCYNSER---AVD  202 (441)
T ss_dssp             CEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETT---TCSEEEEE-EESSCCCCEEECSSSSEEEEEESCTTC---CSS
T ss_pred             EEEEeccCCcccccCcccccccccccceEEeecCc---cceeeEEE-ecCCCccceEECCCCCEEEEEecCCCc---eEE
Confidence            4444433321100     000 0011123334443   2222 222 2234455 8999999998776633221   111


Q ss_pred             ecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCcee
Q 004475          328 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE  407 (751)
Q Consensus       328 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~  407 (751)
                      ++..+. .....+...+....        ..++|||++++...                      ...+.+.+..+.+..
T Consensus       203 id~~t~-~~~d~i~v~n~p~~--------~~~~~dGk~~~v~~----------------------~~v~vvd~~~~~~v~  251 (441)
T d1qnia2         203 LAGTMR-NDRDWVVVFNVERI--------AAAVKAGNFKTIGD----------------------SKVPVVDGRGESEFT  251 (441)
T ss_dssp             HHHHTC-SSBCEEEEEEHHHH--------HHHHHTTCCBCCTT----------------------CCCCEEECSSSCSSE
T ss_pred             EeccCc-ceEEEEEeCCccce--------EEEecCCCEEEeCC----------------------CCcEEEEcccCCceE
Confidence            222221 11111211111110        45789999664422                      112333344433333


Q ss_pred             EEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCC
Q 004475          408 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL  460 (751)
Q Consensus       408 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~  460 (751)
                      ......            ..++.+++||||++++.+.   ..-..+.++|++.
T Consensus       252 ~~IPvg------------ksPhGv~vSPDGkyl~~~~---~~~~tvsv~d~~k  289 (441)
T d1qnia2         252 RYIPVP------------KNPHGLNTSPDGKYFIANG---KLSPTVSVIAIDK  289 (441)
T ss_dssp             EEECCB------------SSCCCEEECTTSCEEEEEC---TTSSBEEEEEGGG
T ss_pred             EEEeCC------------CCccCceECCCCCEEEEeC---CcCCcEEEEEeeh
Confidence            222221            1244579999999888764   2234588888753


No 134
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.59  E-value=1e-07  Score=91.95  Aligned_cols=80  Identities=16%  Similarity=0.102  Sum_probs=58.1

Q ss_pred             hHHHHHHhCCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475          545 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH  624 (751)
Q Consensus       545 ~~~~~~~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~  624 (751)
                      .....|.++||.|++++   ..|.+..       +...+++.+.|+.+.+..  ..+++.++||||||.++..++.++|+
T Consensus        30 ~i~~~L~~~G~~v~~~~---~~~~~~~-------~~~a~~l~~~i~~~~~~~--g~~~v~ligHS~GG~~~r~~~~~~p~   97 (285)
T d1ex9a_          30 GIPSALRRDGAQVYVTE---VSQLDTS-------EVRGEQLLQQVEEIVALS--GQPKVNLIGHSHGGPTIRYVAAVRPD   97 (285)
T ss_dssp             THHHHHHHTTCCEEEEC---CCSSSCH-------HHHHHHHHHHHHHHHHHH--CCSCEEEEEETTHHHHHHHHHHHCGG
T ss_pred             HHHHHHHhCCCEEEEeC---CCCCCCc-------HHHHHHHHHHHHHHHHHc--CCCeEEEEEECccHHHHHHHHHHCCc
Confidence            45678889999999944   4455432       223344444454444432  34689999999999999999999999


Q ss_pred             ceeEEEEccCCC
Q 004475          625 LFCCGIARSGSY  636 (751)
Q Consensus       625 ~~~~~v~~~~~~  636 (751)
                      +++.++.+++..
T Consensus        98 ~v~~lv~i~tPh  109 (285)
T d1ex9a_          98 LIASATSVGAPH  109 (285)
T ss_dssp             GEEEEEEESCCT
T ss_pred             cceeEEEECCCC
Confidence            999999988763


No 135
>d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=98.57  E-value=2.8e-07  Score=87.73  Aligned_cols=164  Identities=18%  Similarity=0.125  Sum_probs=91.3

Q ss_pred             CCeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEE
Q 004475          553 RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCG  629 (751)
Q Consensus       553 ~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~  629 (751)
                      ..+.|+.   .+..|++.........+.+.+++.+   .|++..  ...++.|+||||||.+|..+|.+.   ...+..+
T Consensus        69 ~~~~V~a---l~~pG~~~~e~~~~s~~~~a~~~~~---~i~~~~--~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~l  140 (255)
T d1mo2a_          69 GIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQAD---AVIRTQ--GDKPFVVAGHSAGALMAYALATELLDRGHPPRGV  140 (255)
T ss_dssp             TTCCEEE---ECCTTSSTTCCEESSHHHHHHHHHH---HHHHTT--SSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEE
T ss_pred             CCceEEE---EeCCCcCCCCCCCCCHHHHHHHHHH---HHHHhC--CCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEE
Confidence            3577888   4455665544433344555554443   444432  235799999999999999998754   3457888


Q ss_pred             EEccCCCCCCCCc----------cCccccc---ccch-----hhHHHHHhcCcccccCCCCCCEEEEEcCCCCCCCCChH
Q 004475          630 IARSGSYNKTLTP----------FGFQTEF---RTLW-----EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM  691 (751)
Q Consensus       630 v~~~~~~d~~~~~----------~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~vp~~~~  691 (751)
                      +++.+........          .......   ...+     ...+....+    ....+.+|++++.+.+|....  ..
T Consensus       141 vlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~----~~~~~~~p~l~v~a~~~~~~~--~~  214 (255)
T d1mo2a_         141 VLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQW----RPRETGLPTLLVSAGEPMGPW--PD  214 (255)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHHHHHHHHHHHC----CCCCCCCCEEEEECCSSSSCC--TT
T ss_pred             EEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHHHHHHHHHhcC----CCccccceEEEeecCCCCCcc--hh
Confidence            8877642200000          0000000   0000     001111222    234578999999998875543  21


Q ss_pred             HHHHHHHHHH-hCCCcEEEEEeCCCCCcCCccccHHHHHHHHHHHHH
Q 004475          692 QAERFFDALK-GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ  737 (751)
Q Consensus       692 ~~~~~~~~l~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~  737 (751)
                      .      ... .....++++.+|+ +|..+..+........|.+||.
T Consensus       215 ~------~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~  254 (255)
T d1mo2a_         215 D------SWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG  254 (255)
T ss_dssp             C------CCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred             h------HHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence            1      111 1234678999997 6764435667778888888874


No 136
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.55  E-value=1.3e-05  Score=79.62  Aligned_cols=84  Identities=13%  Similarity=0.071  Sum_probs=52.5

Q ss_pred             cceeEEeecCCCCCCCCccc-ccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC
Q 004475            4 FTGIGIHRLLPDDSLGPEKE-VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD   82 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~-l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~   82 (751)
                      ...|.+||+.+    ++... +..  ....+...+||||+ .|+..          .....|.+++...++.........
T Consensus        32 Dg~i~vWd~~~----~~~~~~l~~--H~~~V~~l~~s~~~-~l~s~----------s~D~~i~iw~~~~~~~~~~~~~~~   94 (355)
T d1nexb2          32 DKMIRVYDSIN----KKFLLQLSG--HDGGVWALKYAHGG-ILVSG----------STDRTVRVWDIKKGCCTHVFEGHN   94 (355)
T ss_dssp             TTEEEEEETTT----TEEEEEEEC--CSSCEEEEEEETTT-EEEEE----------ETTCCEEEEETTTTEEEEEECCCS
T ss_pred             CCeEEEEECCC----CcEEEEEEC--CCCCEEEEEEcCCC-EEEEE----------eccccccccccccccccccccccc
Confidence            45799999988    76543 331  23368889999976 55553          233677777877766444433222


Q ss_pred             ccccceeeeeEEecCCcEEEEeec
Q 004475           83 ICLNAVFGSFVWVNNSTLLIFTIP  106 (751)
Q Consensus        83 ~~~~~~~~~~~wspDg~~l~~~~~  106 (751)
                      ..  .......++++++.++..+.
T Consensus        95 ~~--~~~~~~~~~~~~~~~~~~~~  116 (355)
T d1nexb2          95 ST--VRCLDIVEYKNIKYIVTGSR  116 (355)
T ss_dssp             SC--EEEEEEEEETTEEEEEEEET
T ss_pred             cc--ccccccccccccceeeeecC
Confidence            11  12345678899998888754


No 137
>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]}
Probab=98.55  E-value=8.7e-08  Score=78.27  Aligned_cols=96  Identities=16%  Similarity=0.062  Sum_probs=65.8

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCCCC
Q 004475          488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG  567 (751)
Q Consensus       488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~g  567 (751)
                      ..+|.++.....-          .-|.||++||.+              ..|..        .+.++|.|++   +|.+|
T Consensus         7 ~~~G~~l~y~~~G----------~G~pvlllHG~~--------------~~w~~--------~L~~~yrvi~---~DlpG   51 (122)
T d2dsta1           7 HLYGLNLVFDRVG----------KGPPVLLVAEEA--------------SRWPE--------ALPEGYAFYL---LDLPG   51 (122)
T ss_dssp             EETTEEEEEEEEC----------CSSEEEEESSSG--------------GGCCS--------CCCTTSEEEE---ECCTT
T ss_pred             EECCEEEEEEEEc----------CCCcEEEEeccc--------------ccccc--------cccCCeEEEE---Eeccc
Confidence            3466666666542          147889999842              11211        1457999999   66778


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 004475          568 EGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH  624 (751)
Q Consensus       568 ~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~  624 (751)
                      +|.+..+....++..+++.+.++.+      +.++..++||||||.+++.+++..+.
T Consensus        52 ~G~S~~p~~s~~~~a~~i~~ll~~L------~i~~~~viG~S~Gg~ia~~laa~~~~  102 (122)
T d2dsta1          52 YGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR  102 (122)
T ss_dssp             STTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred             cCCCCCcccccchhHHHHHHHHHHh------CCCCcEEEEeCccHHHHHHHHhhccc
Confidence            8887655555566666666665554      34678999999999999999997754


No 138
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=1.1e-07  Score=92.16  Aligned_cols=68  Identities=12%  Similarity=0.106  Sum_probs=42.8

Q ss_pred             CeEEEEcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEcc
Q 004475          554 RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS  633 (751)
Q Consensus       554 G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~  633 (751)
                      ++.|++   .+.+|+|.+.    ..+..+.+...++..+     .+..++.++||||||.+|+.+|.++|+++..++.+.
T Consensus        49 ~~~v~~---~d~~g~~~~~----~~~~~a~~~~~~~~~~-----~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~  116 (286)
T d1xkta_          49 SIPTYG---LQCTRAAPLD----SIHSLAAYYIDCIRQV-----QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN  116 (286)
T ss_dssp             SSCEEE---ECCCTTSCCS----CHHHHHHHHHHHHHHH-----CCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred             CCeEEE---EeCCCCCCCC----CHHHHHHHHHHHHHHh-----cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence            678888   4555766542    2344455444444332     223689999999999999999999998877766544


No 139
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]}
Probab=98.48  E-value=4.9e-08  Score=104.47  Aligned_cols=132  Identities=19%  Similarity=0.252  Sum_probs=83.8

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC-CCCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDKL  572 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~g~g~~~  572 (751)
                      +..-+|.|+.....+  ++|+||++|||++..+..        ..+.+........++.++++||.++||- ..|.-...
T Consensus        98 L~LnI~~P~~~~~~~--~~PVlv~ihGG~f~~g~~--------~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~  167 (534)
T d1llfa_          98 LTINVVRPPGTKAGA--NLPVMLWIFGGGFEIGSP--------TIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGD  167 (534)
T ss_dssp             CEEEEEECTTCCTTC--CEEEEEEECCSTTTSCCG--------GGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSH
T ss_pred             CEEEEEECCCCCCCC--CCeEEEEECCCccccCCC--------CCCCchhccchhhhccCCeEEEEeecCCCcccccCCc
Confidence            677788897654433  599999999998654322        2222111111224457899999988852 12221100


Q ss_pred             --CCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-----CC---CceeEEEEccCC
Q 004475          573 --PNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-----AP---HLFCCGIARSGS  635 (751)
Q Consensus       573 --~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~-----~p---~~~~~~v~~~~~  635 (751)
                        .........+.|...|++|+++.-   .=||++|.|+|+|.||..+..++..     .|   ..|..+|+.+|.
T Consensus       168 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs  243 (534)
T d1llfa_         168 DIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA  243 (534)
T ss_dssp             HHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred             ccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence              000011245789999999999852   1489999999999999988766542     11   258999999974


No 140
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Probab=98.48  E-value=4.3e-08  Score=105.08  Aligned_cols=131  Identities=20%  Similarity=0.270  Sum_probs=84.0

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHH-HhCCeEEEEcCCCC-CCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIP-IIGEGDK  571 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~v~~~~~~~-~~g~g~~  571 (751)
                      +..-+|.|+.....+  ++|+||++|||++..++..        .+.+. ......+ +..+++||.++||- ..|+-..
T Consensus       106 L~LnI~~P~~~~~~~--~lPV~V~ihGG~f~~G~~~--------~~~~~-~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~  174 (544)
T d1thga_         106 LYLNVFRPAGTKPDA--KLPVMVWIYGGAFVYGSSA--------AYPGN-SYVKESINMGQPVVFVSINYRTGPFGFLGG  174 (544)
T ss_dssp             CEEEEEEETTCCTTC--CEEEEEEECCCTTCCSGGG--------GCCSH-HHHHHHHHTTCCCEEEEECCCCHHHHHCCS
T ss_pred             CEEEEEECCCCCCCC--CCCEEEEeccCCCccCCCc--------cCCcc-hhhhhhhhccCCeEEEecccccccccccCC
Confidence            677777887654443  5999999999987654321        11110 0112223 46788999977752 2232111


Q ss_pred             CC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEccCC
Q 004475          572 LP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS  635 (751)
Q Consensus       572 ~~--~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~  635 (751)
                      ..  ........+.|.+.|++|+++.-   .=|+++|-|+|+|.||..+..+++..        ...|..+|+.+|.
T Consensus       175 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~  251 (544)
T d1thga_         175 DAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG  251 (544)
T ss_dssp             HHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred             chhhccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence            00  00011345889999999999851   13799999999999999888776532        2479999999975


No 141
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46  E-value=1.3e-07  Score=101.25  Aligned_cols=125  Identities=21%  Similarity=0.227  Sum_probs=85.6

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCCC-CCC---C
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI-IGE---G  569 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~-~g~---g  569 (751)
                      +..-+|.|......  .++|++|++|||++..++.        ..+.+     ...++.++.+||.++||-. .|.   +
T Consensus        97 L~LnI~~P~~~~~~--~~lPV~v~ihGG~~~~gs~--------~~~~~-----~~~~~~~~vIvVt~nYRLg~~GFl~~~  161 (532)
T d2h7ca1          97 LYLNIYTPADLTKK--NRLPVMVWIHGGGLMVGAA--------STYDG-----LALAAHENVVVVTIQYRLGIWGFFSTG  161 (532)
T ss_dssp             CEEEEEECSCTTSC--CCEEEEEEECCSTTTSCCS--------TTSCC-----HHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred             CEEEEEECCCCCCC--CCcEEEEEEeCCccccccc--------ccCCc-----hhhhhcCceEEEEEeeccCCCcccccc
Confidence            56677789764333  3599999999998754332        21211     2344678999999888522 232   1


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCCC
Q 004475          570 DKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY  636 (751)
Q Consensus       570 ~~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~  636 (751)
                      ......   ...+.|.+.|++|+++.-   .=|+++|-|+|+|.||..+..++..  ....|..+|+.++..
T Consensus       162 ~~~~~g---N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~  230 (532)
T d2h7ca1         162 DEHSRG---NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA  230 (532)
T ss_dssp             STTCCC---CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred             cccccc---ccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence            111111   235789999999999851   1379999999999999999888764  235799999999753


No 142
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]}
Probab=98.45  E-value=1.2e-07  Score=100.00  Aligned_cols=128  Identities=20%  Similarity=0.150  Sum_probs=83.7

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC-CCCCCC--
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGD--  570 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~g~g~--  570 (751)
                      +..-+|.|+..    ..++|+||++|||++..++...        ..   ......+.+.+++||.++||- ..|.=.  
T Consensus        82 L~lni~~P~~~----~~~lPV~v~ihGG~~~~g~~~~--------~~---~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~  146 (483)
T d1qe3a_          82 LYVNVFAPDTP----SQNLPVMVWIHGGAFYLGAGSE--------PL---YDGSKLAAQGEVIVVTLNYRLGPFGFLHLS  146 (483)
T ss_dssp             CEEEEEEECSS----CCSEEEEEEECCSTTTSCCTTS--------GG---GCCHHHHHHHTCEEEEECCCCHHHHSCCCT
T ss_pred             CEEEEEECCCC----CCCCceEEEEeecccccCCccc--------cc---cccccccccCceEEEeecccccchhhcccc
Confidence            67777778642    2359999999999876443211        11   011233345679999988752 223210  


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004475          571 KLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY  636 (751)
Q Consensus       571 ~~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~  636 (751)
                      ...........+.|...|++|+++.-   .=||++|.|+|+|.||..+..++...  ...|..+|+.+|..
T Consensus       147 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~  217 (483)
T d1qe3a_         147 SFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS  217 (483)
T ss_dssp             TTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence            10011112345789999999998851   13899999999999999998887643  25799999999864


No 143
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=98.44  E-value=1.5e-05  Score=77.98  Aligned_cols=238  Identities=10%  Similarity=0.093  Sum_probs=133.1

Q ss_pred             eEEeecCCCCCCCCcccccCCCCcc---cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCC-
Q 004475            7 IGIHRLLPDDSLGPEKEVHGYPDGA---KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-   82 (751)
Q Consensus         7 ~~~~~~~~~~~~g~~~~l~~~~~~~---~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~-   82 (751)
                      |+.++..+    ++.+.+.......   .....+++|||..|+..          +....|.+++.+++....+..... 
T Consensus        48 I~r~d~~~----~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~va----------d~~~~i~~~~~~g~~~~~~~~~~~g  113 (314)
T d1pjxa_          48 ILRIDLKT----GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA----------DMRLGLLVVQTDGTFEEIAKKDSEG  113 (314)
T ss_dssp             EEEECTTT----CCEEEEECCEETTEECCEEEEEECSSSSEEEEE----------ETTTEEEEEETTSCEEECCSBCTTS
T ss_pred             EEEEECCC----CcEEEEECCccccCCCcceeEEEeCCCCEEEEE----------ECCCeEEEEeCCCcEEEEEeccccc
Confidence            77777776    7766554211111   13457899999877654          233568899987766554433222 


Q ss_pred             ccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEE
Q 004475           83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG  162 (751)
Q Consensus        83 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  162 (751)
                      ..++ ..+.++..|||+ |+|+.............                   .              .......||.+
T Consensus       114 ~~~~-~pndl~~d~~G~-lyvtd~~~~~~~~~~~~-------------------~--------------~~~~~G~v~~~  158 (314)
T d1pjxa_         114 RRMQ-GCNDCAFDYEGN-LWITAPAGEVAPADYTR-------------------S--------------MQEKFGSIYCF  158 (314)
T ss_dssp             CBCB-CCCEEEECTTSC-EEEEECBCBCTTSCCCB-------------------T--------------TSSSCEEEEEE
T ss_pred             cccC-CCcEEEECCCCC-EEEecCccCcccccccc-------------------e--------------eccCCceEEEE
Confidence            2222 135678999995 67763321111000000                   0              00022689999


Q ss_pred             cCCCCceecCCC-ceEEeeeeCCCCc----eEEEEEecCCcccccccCCCceeEEEEeCCC-ceee---eeccCCCCCCC
Q 004475          163 SLDGTAKDFGTP-AVYTAVEPSPDQK----YVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVR---ELCDLPPAEDI  233 (751)
Q Consensus       163 ~~~G~~~~lt~~-~~~~~~~~SpDG~----~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~---~l~~~~~~~~~  233 (751)
                      +.+|+...+... .....++|+||++    +|++....            ...|++++++. +.+.   .+...+..   
T Consensus       159 ~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~------------~~~i~~~d~~~~g~~~~~~~~~~~~~~---  223 (314)
T d1pjxa_         159 TTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGT---  223 (314)
T ss_dssp             CTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCC---
T ss_pred             eecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeec------------ccceEEeeccCccccceeeEEEEcccc---
Confidence            998876655443 3345788998875    56654322            45688887642 2221   11111111   


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE-eEeeceeEE-EEEecCCce
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFS-VSWCDDSLA  311 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-l~~~~~~~~-~~~spdg~~  311 (751)
                            ......++++.++|+  |+.+..           ..+.|++++.+   ++.... +........ ++|.||++.
T Consensus       224 ------~~~~pdGiavD~~Gn--lyVa~~-----------~~g~I~~~dp~---~g~~~~~i~~p~~~~t~~afg~d~~~  281 (314)
T d1pjxa_         224 ------HEGGADGMDFDEDNN--LLVANW-----------GSSHIEVFGPD---GGQPKMRIRCPFEKPSNLHFKPQTKT  281 (314)
T ss_dssp             ------SSCEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECTT---CBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred             ------ccccceeeEEecCCc--EEEEEc-----------CCCEEEEEeCC---CCEEEEEEECCCCCEEEEEEeCCCCE
Confidence                  011234788999997  555431           23578998865   444433 332233455 899999998


Q ss_pred             EEEeeeecccceeEEEecCCCC
Q 004475          312 LVNETWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       312 l~~~~~~~~~~~~l~~~~~~~~  333 (751)
                      |+.+.   ....+||++++...
T Consensus       282 lyVt~---~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         282 IFVTE---HENNAVWKFEWQRN  300 (314)
T ss_dssp             EEEEE---TTTTEEEEEECSSC
T ss_pred             EEEEE---CCCCcEEEEECCCC
Confidence            87655   23468999988664


No 144
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.41  E-value=1.1e-07  Score=102.76  Aligned_cols=135  Identities=18%  Similarity=0.147  Sum_probs=82.2

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCC-CCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-IIGEGDK  571 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~-~~g~g~~  571 (751)
                      +..-+|.|...... ..++|+||++|||++..++...........+      ....++. .+.+||.++||- ..|.-..
T Consensus        81 L~LNI~~P~~~~~~-~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~------dg~~la~~~~vIvVt~nYRlg~~GFl~~  153 (579)
T d2bcea_          81 LYLNIWVPQGRKEV-SHDLPVMIWIYGGAFLMGASQGANFLSNYLY------DGEEIATRGNVIVVTFNYRVGPLGFLST  153 (579)
T ss_dssp             CEEEEEEEECSSSC-CCSEEEEEECCCCSEEEC-------CTTGGG------CCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred             CEEEEEECCCCCCC-CCCCcEEEEECCCcccCCCCCCcccCCcccc------chhhhhccCCEEEEeecccccccccccc
Confidence            66777778643221 2359999999999876544322211110001      1234444 468888877752 2222111


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEccCC
Q 004475          572 LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGS  635 (751)
Q Consensus       572 ~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~  635 (751)
                      ..........+.|...|++|+++.-   .=||++|-|+|+|.||..+..++..  ....|..+|+.+|.
T Consensus       154 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs  222 (579)
T d2bcea_         154 GDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV  222 (579)
T ss_dssp             SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred             cccCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence            0111112345788999999999851   1379999999999999999877653  34579999999975


No 145
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]}
Probab=98.41  E-value=1.6e-07  Score=100.48  Aligned_cols=129  Identities=16%  Similarity=0.181  Sum_probs=83.9

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC-CCCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDKL  572 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~g~g~~~  572 (751)
                      +..-+|.|...    ..++|++|++|||++..++.....      +     .....++.++.+||.++||- ..|.-...
T Consensus        92 L~LnI~~P~~~----~~~lPV~v~ihGG~~~~g~~~~~~------~-----~~~~~~~~~~vvvVt~nYRlg~~GFl~~~  156 (532)
T d1ea5a_          92 LYLNIWVPSPR----PKSTTVMVWIYGGGFYSGSSTLDV------Y-----NGKYLAYTEEVVLVSLSYRVGAFGFLALH  156 (532)
T ss_dssp             CEEEEEECSSC----CSSEEEEEEECCSTTTCCCTTCGG------G-----CTHHHHHHHTCEEEECCCCCHHHHHCCCT
T ss_pred             CEEEEEeCCCC----CCCCcEEEEEEcCCcccccCCccc------c-----CcchhhcccCccEEEEeeccccccccccc
Confidence            56667778642    235899999999987554332111      1     11233467899999988853 22221110


Q ss_pred             -CCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004475          573 -PNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN  637 (751)
Q Consensus       573 -~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d  637 (751)
                       .........+.|...|++|+++.-   .=||++|.|+|+|.||..+..++...  ...|..+|+.++...
T Consensus       157 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~  227 (532)
T d1ea5a_         157 GSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN  227 (532)
T ss_dssp             TCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred             cccCCCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence             001111235789999999999851   13799999999999999988776632  247999999887643


No 146
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.41  E-value=6e-05  Score=71.45  Aligned_cols=227  Identities=12%  Similarity=-0.024  Sum_probs=140.2

Q ss_pred             ceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhh
Q 004475           61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN  140 (751)
Q Consensus        61 ~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (751)
                      ..+|..+++++.+...+.....     .+..+.|.+..++|+++-..                                 
T Consensus         9 ~~~I~~~~l~~~~~~~~~~~~~-----~~~~id~d~~~~~lYw~D~~---------------------------------   50 (266)
T d1ijqa1           9 RHEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS---------------------------------   50 (266)
T ss_dssp             BSSEEEEETTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred             CCeEEEEECCCCcceeeeCCCC-----ceEEEEEEeCCCEEEEEECC---------------------------------
Confidence            3578999999988777754333     24577888999999987321                                 


Q ss_pred             ccCCccchhhhhhheeeEEEEEcCCC-----Cceec-CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEE
Q 004475          141 LLKDEYDESLFDYYTTAQLVLGSLDG-----TAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV  213 (751)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~l~~~~~~G-----~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~  213 (751)
                                     ...|+..+++|     ..+.+ ... .....+++.+-++.|+++...            ...|++
T Consensus        51 ---------------~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~------------~~~I~v  103 (266)
T d1ijqa1          51 ---------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV  103 (266)
T ss_dssp             ---------------TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred             ---------------CCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecC------------CCEEEe
Confidence                           03566666644     12222 222 445567887788889886433            346889


Q ss_pred             EeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceE
Q 004475          214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI  293 (751)
Q Consensus       214 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  293 (751)
                      +++++...+.+....            ...++.++..|...+ +++++..          ....|++.+++   +...+.
T Consensus       104 ~~~~g~~~~~~~~~~------------~~~P~~l~vd~~~g~-ly~~~~~----------~~~~I~r~~~d---Gs~~~~  157 (266)
T d1ijqa1         104 ADTKGVKRKTLFREN------------GSKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGLN---GVDIYS  157 (266)
T ss_dssp             EETTSSSEEEEEECT------------TCCEEEEEEETTTTE-EEEEECS----------SSCEEEEEETT---SCCEEE
T ss_pred             EecCCceEEEEEcCC------------CCCcceEEEEcccCe-EEEeccC----------CCcceeEeccC---CCceec
Confidence            999987655442221            122457888987776 7886511          22479998886   656666


Q ss_pred             eEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeee
Q 004475          294 LHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK  371 (751)
Q Consensus       294 l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~  371 (751)
                      +.... .... +++.+.++.|++..   .....|+.+++++.  ..+.+.......     ..| ...+.++.+|++...
T Consensus       158 l~~~~~~~p~gl~iD~~~~~lYw~d---~~~~~I~~~~~dG~--~~~~~~~~~~~~-----~~p-~~lav~~~~ly~td~  226 (266)
T d1ijqa1         158 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG--NRKTILEDEKRL-----AHP-FSLAVFEDKVFWTDI  226 (266)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEEECTTTT-----SSE-EEEEEETTEEEEEET
T ss_pred             ccccccceeeEEEeeccccEEEEec---CCcCEEEEEECCCC--CEEEEEeCCCcc-----ccc-EEEEEECCEEEEEEC
Confidence            55433 2334 88999999998875   23458999999884  334443322110     011 335566777777662


Q ss_pred             ecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEE
Q 004475          372 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI  409 (751)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l  409 (751)
                                          ....|++++..+|+...+
T Consensus       227 --------------------~~~~I~~~~~~~g~~~~~  244 (266)
T d1ijqa1         227 --------------------INEAIFSANRLTGSDVNL  244 (266)
T ss_dssp             --------------------TTTEEEEEETTTCCCCEE
T ss_pred             --------------------CCCeEEEEECCCCcceEE
Confidence                                234788888877765433


No 147
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.40  E-value=4.4e-05  Score=73.83  Aligned_cols=138  Identities=14%  Similarity=0.054  Sum_probs=83.7

Q ss_pred             eEEEEEcC-CCCceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCC
Q 004475          157 AQLVLGSL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV  235 (751)
Q Consensus       157 ~~l~~~~~-~G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~  235 (751)
                      ..|+.+++ +|+.+.+..+.....+.+.+||+.++..               ...|+++|.++++.+.+...+...  + 
T Consensus        40 ~~I~r~d~~~g~~~~~~~~~~~~~i~~~~dg~l~va~---------------~~gl~~~d~~tg~~~~l~~~~~~~--~-  101 (295)
T d2ghsa1          40 RELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS---------------DDGLFLRDTATGVLTLHAELESDL--P-  101 (295)
T ss_dssp             TEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE---------------TTEEEEEETTTCCEEEEECSSTTC--T-
T ss_pred             CEEEEEECCCCeEEEEECCCCcEEEEEecCCCEEEEE---------------eCccEEeecccceeeEEeeeecCC--C-
Confidence            58999998 5555544444556678888999766543               124889999988877775432210  0 


Q ss_pred             ccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEE
Q 004475          236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVN  314 (751)
Q Consensus       236 ~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~  314 (751)
                           ......+...|+|+  +++.......     ....+.+|.++-     +..+.+...-.... +.||+|++.+++
T Consensus       102 -----~~~~nd~~vd~~G~--iw~~~~~~~~-----~~~~g~l~~~~~-----g~~~~~~~~~~~~Ng~~~s~d~~~l~~  164 (295)
T d2ghsa1         102 -----GNRSNDGRMHPSGA--LWIGTMGRKA-----ETGAGSIYHVAK-----GKVTKLFADISIPNSICFSPDGTTGYF  164 (295)
T ss_dssp             -----TEEEEEEEECTTSC--EEEEEEETTC-----CTTCEEEEEEET-----TEEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred             -----cccceeeEECCCCC--EEEEeccccc-----cccceeEeeecC-----CcEEEEeeccCCcceeeecCCCceEEE
Confidence                 11234678999997  5555432111     112345666542     23444443322334 899999999888


Q ss_pred             eeeecccceeEEEecCCC
Q 004475          315 ETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       315 ~~~~~~~~~~l~~~~~~~  332 (751)
                      +.   +....||.++.+.
T Consensus       165 ~d---t~~~~I~~~~~d~  179 (295)
T d2ghsa1         165 VD---TKVNRLMRVPLDA  179 (295)
T ss_dssp             EE---TTTCEEEEEEBCT
T ss_pred             ee---cccceeeEeeecc
Confidence            66   3346788887654


No 148
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.39  E-value=1.5e-07  Score=100.91  Aligned_cols=126  Identities=18%  Similarity=0.187  Sum_probs=82.7

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC-CCCC---C
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGE---G  569 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~g~---g  569 (751)
                      +..-+|.|....   ..++|++|++|||++..++......           ......+..+.+|+.++||- ..|.   +
T Consensus        97 L~LnI~~P~~~~---~~~lPV~v~ihGG~~~~gs~~~~~~-----------~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~  162 (542)
T d2ha2a1          97 LYLNVWTPYPRP---ASPTPVLIWIYGGGFYSGAASLDVY-----------DGRFLAQVEGAVLVSMNYRVGTFGFLALP  162 (542)
T ss_dssp             CEEEEEEESSCC---SSCEEEEEEECCSTTTCCCTTSGGG-----------CTHHHHHHHCCEEEEECCCCHHHHHCCCT
T ss_pred             CEEEEEecCCCC---CCCCcEEEEEEECccccccCccccc-----------CchhhhhhccceeEeeeeeccceeeeccc
Confidence            566677786422   2359999999999875443321111           11222345789999988852 1222   2


Q ss_pred             CC-CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCC
Q 004475          570 DK-LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY  636 (751)
Q Consensus       570 ~~-~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~  636 (751)
                      .. ....   ...+.|.+.|++|+++.-   .=||++|.|+|+|.||..+..++...  ...|..+|+.++..
T Consensus       163 ~~~~~~g---N~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~  232 (542)
T d2ha2a1         163 GSREAPG---NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP  232 (542)
T ss_dssp             TCSSCCS---CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred             ccccCCC---cCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence            11 1111   235789999999999851   13799999999999999998877643  24799999998854


No 149
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=0.00016  Score=68.27  Aligned_cols=226  Identities=8%  Similarity=0.025  Sum_probs=137.1

Q ss_pred             eEEEEEcCCC-CceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCce----eeeeccCCCC
Q 004475          157 AQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPA  230 (751)
Q Consensus       157 ~~l~~~~~~G-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~  230 (751)
                      ..|..+++++ +...+... .....+.|.+..++|+++...            ...|+..++++..    .+.+..    
T Consensus        10 ~~I~~~~l~~~~~~~~~~~~~~~~~id~d~~~~~lYw~D~~------------~~~I~~~~l~~~~~~~~~~~~~~----   73 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVIS----   73 (266)
T ss_dssp             SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEEC----
T ss_pred             CeEEEEECCCCcceeeeCCCCceEEEEEEeCCCEEEEEECC------------CCEEEEEEecCCCCCcceEEEEe----
Confidence            4578889866 55555444 667788899999999886432            2357777776432    111111    


Q ss_pred             CCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE-EEEecC
Q 004475          231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS-VSWCDD  308 (751)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~-~~~spd  308 (751)
                              .....+.++++.+-++. ||++..           ....|++.+++   +.....+... ..... ++..|.
T Consensus        74 --------~~~~~p~glAvD~~~~~-lY~~d~-----------~~~~I~v~~~~---g~~~~~~~~~~~~~P~~l~vd~~  130 (266)
T d1ijqa1          74 --------RDIQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADTK---GVKRKTLFRENGSKPRAIVVDPV  130 (266)
T ss_dssp             --------SSCSCCCEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SSSEEEEEECTTCCEEEEEEETT
T ss_pred             --------CCCCCcceEEEeeccce-EEEEec-----------CCCEEEeEecC---CceEEEEEcCCCCCcceEEEEcc
Confidence                    11122447888888888 888652           23578888886   5444444433 33344 788888


Q ss_pred             CceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCCCC
Q 004475          309 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT  388 (751)
Q Consensus       309 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~  388 (751)
                      ...|+++...  ....|+++++++.  ..+.+..........      +++.+.++.|++..                  
T Consensus       131 ~g~ly~~~~~--~~~~I~r~~~dGs--~~~~l~~~~~~~p~g------l~iD~~~~~lYw~d------------------  182 (266)
T d1ijqa1         131 HGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVD------------------  182 (266)
T ss_dssp             TTEEEEEECS--SSCEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEE------------------
T ss_pred             cCeEEEeccC--CCcceeEeccCCC--ceecccccccceeeE------EEeeccccEEEEec------------------
Confidence            8888876532  2357999999984  445555433222111      77888888888876                  


Q ss_pred             CCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeE
Q 004475          389 PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ  465 (751)
Q Consensus       389 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~  465 (751)
                        .....|.++++.+...+.+......  .         .....++.++..|+++...   ...|++++..+|+..+
T Consensus       183 --~~~~~I~~~~~dG~~~~~~~~~~~~--~---------~~p~~lav~~~~ly~td~~---~~~I~~~~~~~g~~~~  243 (266)
T d1ijqa1         183 --SKLHSISSIDVNGGNRKTILEDEKR--L---------AHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSDVN  243 (266)
T ss_dssp             --TTTTEEEEEETTSCSCEEEEECTTT--T---------SSEEEEEEETTEEEEEETT---TTEEEEEETTTCCCCE
T ss_pred             --CCcCEEEEEECCCCCEEEEEeCCCc--c---------cccEEEEEECCEEEEEECC---CCeEEEEECCCCcceE
Confidence              2234788899976655555443221  1         1112445567788887533   4579999987765443


No 150
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.35  E-value=6.6e-05  Score=70.90  Aligned_cols=240  Identities=15%  Similarity=0.122  Sum_probs=145.4

Q ss_pred             CCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccc-cceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCC
Q 004475           42 GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL-NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL  120 (751)
Q Consensus        42 G~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~  120 (751)
                      |.+|.|..           ...|..+++++....++-....... ...+..+++.+..++|+++...             
T Consensus         1 ~~fLl~s~-----------~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~-------------   56 (263)
T d1npea_           1 GTHLLFAQ-----------TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS-------------   56 (263)
T ss_dssp             CEEEEEEE-----------EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-------------
T ss_pred             CCEEEEeC-----------CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECC-------------
Confidence            67888854           3788899988765444311110000 0013356777778888886221             


Q ss_pred             CCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCCC-CceecCC-C-ceEEeeeeCCCCceEEEEEecCC
Q 004475          121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRP  197 (751)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~  197 (751)
                                                         ...|+..+++| ..+.+.. . .....+++..-++.|+++...  
T Consensus        57 -----------------------------------~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~--   99 (263)
T d1npea_          57 -----------------------------------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ--   99 (263)
T ss_dssp             -----------------------------------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--
T ss_pred             -----------------------------------CCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccC--
Confidence                                               14788888866 4444432 3 556677777678888886432  


Q ss_pred             cccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccc
Q 004475          198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI  277 (751)
Q Consensus       198 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~  277 (751)
                                ...|.++++++...+.+....            ...++.++..|.... ++++...         .....
T Consensus       100 ----------~~~I~~~~~dg~~~~~l~~~~------------l~~p~~l~vdp~~g~-ly~t~~~---------~~~~~  147 (263)
T d1npea_         100 ----------LDRIEVAKMDGTQRRVLFDTG------------LVNPRGIVTDPVRGN-LYWTDWN---------RDNPK  147 (263)
T ss_dssp             ----------TTEEEEEETTSCSCEEEECSS------------CSSEEEEEEETTTTE-EEEEECC---------SSSCE
T ss_pred             ----------CCEEEEEecCCceEEEEeccc------------ccCCcEEEEecccCc-EEEeecC---------CCCcE
Confidence                      346889999887655443221            123458899999887 7886521         11236


Q ss_pred             eeeccCCCCCCCCceEeEeec-eeEE-EEEecCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCC
Q 004475          278 IYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP  355 (751)
Q Consensus       278 l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  355 (751)
                      |++.+++   +...+.+.... .... +++.+.++.|++..   .....|+.+++++.  ..+.+...-...        
T Consensus       148 I~r~~~d---G~~~~~i~~~~~~~P~glaiD~~~~~lYw~d---~~~~~I~~~~~~g~--~~~~v~~~~~~P--------  211 (263)
T d1npea_         148 IETSHMD---GTNRRILAQDNLGLPNGLTFDAFSSQLCWVD---AGTHRAECLNPAQP--GRRKVLEGLQYP--------  211 (263)
T ss_dssp             EEEEETT---SCCCEEEECTTCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTEE--EEEEEEECCCSE--------
T ss_pred             EEEecCC---CCCceeeeeecccccceEEEeecCcEEEEEe---CCCCEEEEEECCCC--CeEEEECCCCCc--------
Confidence            8888886   55555554332 2234 78888999888865   23458999999884  334443321111        


Q ss_pred             CeeeCCCCCEEEEeeeecCCcceEEEEccCCCCCCCCCceeEEEecCCCceeEEee
Q 004475          356 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE  411 (751)
Q Consensus       356 ~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~  411 (751)
                       ...+-++.+|++...                    ....|+++|..+|+...+..
T Consensus       212 -~~lav~~~~lYwtd~--------------------~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         212 -FAVTSYGKNLYYTDW--------------------KTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             -EEEEEETTEEEEEET--------------------TTTEEEEEETTTTEEEEEEC
T ss_pred             -EEEEEECCEEEEEEC--------------------CCCEEEEEECCCCccceEEC
Confidence             233445667777662                    23479999998887655543


No 151
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]}
Probab=98.35  E-value=2.5e-07  Score=98.43  Aligned_cols=130  Identities=17%  Similarity=0.152  Sum_probs=82.3

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCC-CCCCCCC
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIP-IIGEGDK  571 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~-~~g~g~~  571 (751)
                      +..-+|.|+.....  .++|++|++|||++..++.        ..+.    .....++ ..+++|+.++||- ..|.=..
T Consensus        81 L~LnI~~P~~~~~~--~~~PV~v~ihGG~~~~G~~--------~~~~----~~~~~~~~~~~vVvVt~nYRlg~~GFl~~  146 (517)
T d1ukca_          81 LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSN--------ANYN----GTQVIQASDDVIVFVTFNYRVGALGFLAS  146 (517)
T ss_dssp             CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCS--------CSCC----CHHHHHHTTSCCEEEEECCCCHHHHHCCC
T ss_pred             CEEEEEeCCCCCCC--CCceEEEEEcCCccccCCC--------cccc----chhhhhhhccccceEEEEecccceeecCc
Confidence            56667778754333  3589999999998765432        1111    1122233 4677888877752 2222110


Q ss_pred             CC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh----CCCceeEEEEccCCCC
Q 004475          572 LP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH----APHLFCCGIARSGSYN  637 (751)
Q Consensus       572 ~~--~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~----~p~~~~~~v~~~~~~d  637 (751)
                      ..  ........+.|...|++|+++.-   .=|+++|.|+|+|.||..+..++..    ....|..+|+.+|...
T Consensus       147 ~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~  221 (517)
T d1ukca_         147 EKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP  221 (517)
T ss_dssp             HHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred             cccccccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence            00  00011345789999999999851   1379999999999999988766543    2247999999998643


No 152
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.33  E-value=3.3e-07  Score=97.80  Aligned_cols=129  Identities=19%  Similarity=0.205  Sum_probs=82.4

Q ss_pred             EEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHhCCeEEEEcCCCC-CCCCCCC-
Q 004475          494 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDK-  571 (751)
Q Consensus       494 i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~g~g~~-  571 (751)
                      +..-+|.|...    ..++|+||++|||++..++......           ......++.+.+||.++||- ..|.-.. 
T Consensus        90 L~lnI~~P~~~----~~~~PV~v~ihGG~~~~gs~~~~~~-----------~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~  154 (526)
T d1p0ia_          90 LYLNVWIPAPK----PKNATVLIWIYGGGFQTGTSSLHVY-----------DGKFLARVERVIVVSMNYRVGALGFLALP  154 (526)
T ss_dssp             CEEEEEEESSC----CSSEEEEEEECCSTTTSCCTTCGGG-----------CTHHHHHHHCCEEEEECCCCHHHHHCCCT
T ss_pred             CEEEEEeCCCC----CCCCceEEEEECCCcccccCccccc-----------CccccccccceeEEecccccccccccCCC
Confidence            56667778642    2358999999999876544322111           11222346799999988752 2221110 


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004475          572 LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN  637 (751)
Q Consensus       572 ~~~~~~~~~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d  637 (751)
                      ..........+.|...|++|+++.-   .=|+++|-|+|+|.||..+..++...  ...|..+|+.++...
T Consensus       155 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~  225 (526)
T d1p0ia_         155 GNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN  225 (526)
T ss_dssp             TCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred             CcccccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence            0011112345789999999998851   13789999999999999987666532  347888898887643


No 153
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.32  E-value=4.1e-06  Score=85.45  Aligned_cols=132  Identities=10%  Similarity=-0.013  Sum_probs=76.3

Q ss_pred             eEEEEEcC-CCCc-e------ecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eecc
Q 004475          157 AQLVLGSL-DGTA-K------DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCD  226 (751)
Q Consensus       157 ~~l~~~~~-~G~~-~------~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~  226 (751)
                      ..|.++|+ +|+. .      .+..+ ..+..++|||||++|+..+.++.          ...+.+||+++++.. .+..
T Consensus       205 g~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t----------~~~i~lwd~~~g~~~~~l~~  274 (393)
T d1sq9a_         205 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS----------FGCITLYETEFGERIGSLSV  274 (393)
T ss_dssp             SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT----------EEEEEEEETTTCCEEEEECB
T ss_pred             CcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCC----------cceeeecccccceeeeeecc
Confidence            46777777 5522 1      22333 67889999999999988766532          235778999876543 3322


Q ss_pred             CCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeE----E
Q 004475          227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF----S  302 (751)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~----~  302 (751)
                      ..........+......+..++|||||+. |+-.+            ..+.|.+++++.  +.....+..+...+    .
T Consensus       275 ~~~~~~~~~~~~gH~~~V~~l~fspd~~~-l~S~s------------~D~~v~vWd~~~--g~~~~~l~gH~~~v~~~~~  339 (393)
T d1sq9a_         275 PTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAG------------WDGKLRFWDVKT--KERITTLNMHCDDIEIEED  339 (393)
T ss_dssp             C--------CCBSBSSCEEEEEECSSSSE-EEEEE------------TTSEEEEEETTT--TEEEEEEECCGGGCSSGGG
T ss_pred             ccccccceeeeecccCceeeeccCCCCCe-eEEEC------------CCCEEEEEECCC--CCEEEEECCcCCcccCCcc
Confidence            22221222223334455788999999997 55443            336899999862  22333343332222    1


Q ss_pred             -EEEecCCceEE
Q 004475          303 -VSWCDDSLALV  313 (751)
Q Consensus       303 -~~~spdg~~l~  313 (751)
                       +.|+|+|..++
T Consensus       340 ~~~~~~~~~~~~  351 (393)
T d1sq9a_         340 ILAVDEHGDSLA  351 (393)
T ss_dssp             CCCBCTTSCBCS
T ss_pred             EEEECCCCCEEE
Confidence             67899998764


No 154
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.29  E-value=0.00037  Score=59.93  Aligned_cols=193  Identities=16%  Similarity=0.113  Sum_probs=119.6

Q ss_pred             CCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCC
Q 004475           41 DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL  120 (751)
Q Consensus        41 DG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~  120 (751)
                      |+..|.|+...       .+..++++++  +++.+.||..+-..      ...-.+.=.+|.|...-.++..        
T Consensus        24 ~~d~ll~~~~s-------eG~vni~~l~--g~~~vkLtkePI~~------~~~Pk~~ldfi~f~RDV~kGkE--------   80 (313)
T d2hu7a1          24 DGDKLLVVGFS-------EGSVNAYLYD--GGETVKLNREPINS------VLDPHYGVGRVILVRDVSKGAE--------   80 (313)
T ss_dssp             TTTEEEEEEEE-------TTEEEEEEES--SSSCEECCSSCCSE------ECEECTTBSEEEEEEECSTTSC--------
T ss_pred             cCCcEEEEEec-------cceEEEEEEe--CCEEEEEecccccC------cCCCccCcceEEEEeehhcCcc--------
Confidence            45557776532       5667777766  89999998877521      1111222246777755433331        


Q ss_pred             CCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcCC--CCceecCCCceEEeeeeCCCCceEEEEEecCCc
Q 004475          121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD--GTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPY  198 (751)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--G~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~  198 (751)
                                                         .-.|+..++.  |+..++..+..+.-++..-|++.|+|+...   
T Consensus        81 -----------------------------------~Hai~~~Nlk~~GEE~~i~spk~vRI~S~~yddk~vvF~Gas---  122 (313)
T d2hu7a1          81 -----------------------------------QHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGAT---  122 (313)
T ss_dssp             -----------------------------------CEEEEEEETTSTTCEEECTTSCSBEEEEEEECSSCEEEEEEC---
T ss_pred             -----------------------------------eeeEEEEccCCCCeeeEecCCceEEEEEeeecCceEEEeccc---
Confidence                                               1478999997  888888877555555556689999998654   


Q ss_pred             ccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccce
Q 004475          199 SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDII  278 (751)
Q Consensus       199 ~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l  278 (751)
                               ....++|-++++.++.|...|.-               +|.=.-.|++ |+-..--        ...+..+
T Consensus       123 ---------ed~~~LYviegGklrkL~~vPpF---------------sFVtDI~~d~-I~G~g~~--------~g~~~sf  169 (313)
T d2hu7a1         123 ---------EDRVALYALDGGGLRELARLPGF---------------GFVSDIRGDL-IAGLGFF--------GGGRVSL  169 (313)
T ss_dssp             ---------SSCEEEEEEETTEEEEEEEESSC---------------EEEEEEETTE-EEEEEEE--------ETTEEEE
T ss_pred             ---------CCceEEEEEeCCceeeeccCCCc---------------ceEEeccCCe-EEEEeee--------cCCcceE
Confidence                     23466777788989988776633               2222233444 3322210        1122358


Q ss_pred             eeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecc-cceeEEEecCCCC
Q 004475          279 YTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKT-SQTRTWLVCPGSK  333 (751)
Q Consensus       279 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~  333 (751)
                      |+.|+.   .+..+.++..++.+. +.++++.+.+   +..++ +......+|+..+
T Consensus       170 F~adl~---SG~lri~tpkeGS~~~ay~~~gnKV~---sdyEt~gEsywit~D~~s~  220 (313)
T d2hu7a1         170 FTSNLS---SGGLRVFDSGEGSFSSASISPGMKVT---AGLETAREARLVTVDPRDG  220 (313)
T ss_dssp             EEEETT---TEEEEEECCSSEEEEEEEECTTSCEE---EEEEESSCEEEEEECTTTC
T ss_pred             EEEecc---cCCEEEecCCCCcccceeEccCceee---eccCCCCceEEEEEecccC
Confidence            888885   567788888899999 9999988862   22222 3334445677764


No 155
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.27  E-value=0.00026  Score=66.60  Aligned_cols=226  Identities=9%  Similarity=0.057  Sum_probs=137.7

Q ss_pred             eEEEEEcCCCC-cee------cCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCC
Q 004475          157 AQLVLGSLDGT-AKD------FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP  228 (751)
Q Consensus       157 ~~l~~~~~~G~-~~~------lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~  228 (751)
                      ..|..++++|. ...      +..+ ..+..+++.+..++|+++...            ...|++.+++++..+.+....
T Consensus        10 ~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~------------~~~I~~~~l~g~~~~~v~~~~   77 (263)
T d1npea_          10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------EPSIGRASLHGGEPTTIIRQD   77 (263)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT------------TTEEEEEESSSCCCEEEECTT
T ss_pred             CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECC------------CCeEEEEEcccCCcEEEEEec
Confidence            57888888662 221      1112 334567888888889876433            346889999877666553221


Q ss_pred             CCCCCCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEe
Q 004475          229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWC  306 (751)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~s  306 (751)
                      .            ..+.++++..-++. ||++..           ....|.+.+++   +...+.+.... .... ++..
T Consensus        78 ~------------~~p~~iAvD~~~~~-lY~~d~-----------~~~~I~~~~~d---g~~~~~l~~~~l~~p~~l~vd  130 (263)
T d1npea_          78 L------------GSPEGIALDHLGRT-IFWTDS-----------QLDRIEVAKMD---GTQRRVLFDTGLVNPRGIVTD  130 (263)
T ss_dssp             C------------CCEEEEEEETTTTE-EEEEET-----------TTTEEEEEETT---SCSCEEEECSSCSSEEEEEEE
T ss_pred             c------------ccccEEEEeccCCe-EEEecc-----------CCCEEEEEecC---CceEEEEecccccCCcEEEEe
Confidence            1            12346788777777 888652           23478888876   55555554432 3345 7888


Q ss_pred             cCCceEEEeeeecccceeEEEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEeeeecCCcceEEEEccCC
Q 004475          307 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG  386 (751)
Q Consensus       307 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~  386 (751)
                      |....|+++.... ....|+++++++.  ..+.+.......-.      .+++.+.++.|++...               
T Consensus       131 p~~g~ly~t~~~~-~~~~I~r~~~dG~--~~~~i~~~~~~~P~------glaiD~~~~~lYw~d~---------------  186 (263)
T d1npea_         131 PVRGNLYWTDWNR-DNPKIETSHMDGT--NRRILAQDNLGLPN------GLTFDAFSSQLCWVDA---------------  186 (263)
T ss_dssp             TTTTEEEEEECCS-SSCEEEEEETTSC--CCEEEECTTCSCEE------EEEEETTTTEEEEEET---------------
T ss_pred             cccCcEEEeecCC-CCcEEEEecCCCC--Cceeeeeecccccc------eEEEeecCcEEEEEeC---------------
Confidence            9988888766332 2346999999884  44444433222100      1677788888888762               


Q ss_pred             CCCCCCCceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 004475          387 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI  466 (751)
Q Consensus       387 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~l~~~~~~~g~~~~l  466 (751)
                           ....|.+.+++++..+.+...-.     .+         ..++.++++|+++.+.   ...|++++..+|+..+.
T Consensus       187 -----~~~~I~~~~~~g~~~~~v~~~~~-----~P---------~~lav~~~~lYwtd~~---~~~I~~~~~~~g~~~~~  244 (263)
T d1npea_         187 -----GTHRAECLNPAQPGRRKVLEGLQ-----YP---------FAVTSYGKNLYYTDWK---TNSVIAMDLAISKEMDT  244 (263)
T ss_dssp             -----TTTEEEEEETTEEEEEEEEECCC-----SE---------EEEEEETTEEEEEETT---TTEEEEEETTTTEEEEE
T ss_pred             -----CCCEEEEEECCCCCeEEEECCCC-----Cc---------EEEEEECCEEEEEECC---CCEEEEEECCCCccceE
Confidence                 23478888887655554433211     11         2344457888887644   45799999888876554


Q ss_pred             e
Q 004475          467 T  467 (751)
Q Consensus       467 t  467 (751)
                      .
T Consensus       245 ~  245 (263)
T d1npea_         245 F  245 (263)
T ss_dssp             E
T ss_pred             E
Confidence            3


No 156
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.26  E-value=3.8e-05  Score=74.23  Aligned_cols=227  Identities=11%  Similarity=0.045  Sum_probs=131.9

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCcc
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC   84 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~   84 (751)
                      ..|+.++..+    |+.+... ++.  ......+.+||+.++-.            ...|++++.++++.+.+.......
T Consensus        40 ~~I~r~d~~~----g~~~~~~-~~~--~~~~i~~~~dg~l~va~------------~~gl~~~d~~tg~~~~l~~~~~~~  100 (295)
T d2ghsa1          40 RELHELHLAS----GRKTVHA-LPF--MGSALAKISDSKQLIAS------------DDGLFLRDTATGVLTLHAELESDL  100 (295)
T ss_dssp             TEEEEEETTT----TEEEEEE-CSS--CEEEEEEEETTEEEEEE------------TTEEEEEETTTCCEEEEECSSTTC
T ss_pred             CEEEEEECCC----CeEEEEE-CCC--CcEEEEEecCCCEEEEE------------eCccEEeecccceeeEEeeeecCC
Confidence            3577888877    7766554 343  35677888998665442            146999999999988876543321


Q ss_pred             ccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC
Q 004475           85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL  164 (751)
Q Consensus        85 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  164 (751)
                      -..........|+|+ |+|+........                                          ....+|.++ 
T Consensus       101 ~~~~~nd~~vd~~G~-iw~~~~~~~~~~------------------------------------------~~g~l~~~~-  136 (295)
T d2ghsa1         101 PGNRSNDGRMHPSGA-LWIGTMGRKAET------------------------------------------GAGSIYHVA-  136 (295)
T ss_dssp             TTEEEEEEEECTTSC-EEEEEEETTCCT------------------------------------------TCEEEEEEE-
T ss_pred             CcccceeeEECCCCC-EEEEeccccccc------------------------------------------cceeEeeec-
Confidence            111356778899996 566543211110                                          113555543 


Q ss_pred             CCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCcee------eeeccCCCCCCCCCcc
Q 004475          165 DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV------RELCDLPPAEDIPVCY  237 (751)
Q Consensus       165 ~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~------~~l~~~~~~~~~~~~~  237 (751)
                      +|+.+++... .....++||||++.+++....            ...|+.++.+....      ......+         
T Consensus       137 ~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~------------~~~I~~~~~d~~~~~~~~~~~~~~~~~---------  195 (295)
T d2ghsa1         137 KGKVTKLFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLDARTGLPTGKAEVFIDST---------  195 (295)
T ss_dssp             TTEEEEEEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBCTTTCCBSSCCEEEEECT---------
T ss_pred             CCcEEEEeeccCCcceeeecCCCceEEEeecc------------cceeeEeeecccccccccceEEEeccC---------
Confidence            5655555444 444578999999999887543            35688887753211      1111111         


Q ss_pred             CCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEe-cCCceEEEe
Q 004475          238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWC-DDSLALVNE  315 (751)
Q Consensus       238 ~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~s-pdg~~l~~~  315 (751)
                       .......+++...+|+  |+++.-           ..+.|.+++-+   +.....+.--..... ++|- ||.+.|+.+
T Consensus       196 -~~~g~pdG~~vD~~Gn--lWva~~-----------~~g~V~~~dp~---G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         196 -GIKGGMDGSVCDAEGH--IWNARW-----------GEGAVDRYDTD---GNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             -TSSSEEEEEEECTTSC--EEEEEE-----------TTTEEEEECTT---CCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             -cccccccceEEcCCCC--EEeeee-----------CCCceEEecCC---CcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence             1112345778888886  444321           23578888864   443333322223445 7785 899998877


Q ss_pred             eeecc----------cceeEEEecCCC
Q 004475          316 TWYKT----------SQTRTWLVCPGS  332 (751)
Q Consensus       316 ~~~~~----------~~~~l~~~~~~~  332 (751)
                      +....          ....||.+++..
T Consensus       259 ta~~~~~~~~~~~~p~~G~l~~~~~~~  285 (295)
T d2ghsa1         259 SAREHLDDDAITANPQHGLTFELGIEV  285 (295)
T ss_dssp             EBCTTCCHHHHHHCTTTTCEEECSSCC
T ss_pred             ECCcCCChhHhccCCCCceEEEEcCCC
Confidence            63321          124688776654


No 157
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.26  E-value=7.5e-07  Score=95.91  Aligned_cols=117  Identities=17%  Similarity=0.178  Sum_probs=75.9

Q ss_pred             CCCccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCC-CCCCCCC-------CCCCchhHH
Q 004475          509 DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PIIGEGD-------KLPNDRFVE  579 (751)
Q Consensus       509 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~-~~~g~g~-------~~~~~~~~~  579 (751)
                      ..++|+||++|||++..++......            ....++ ....+||.++|| +..|.=.       .........
T Consensus       136 ~~~lPV~V~ihGG~f~~Gs~~~~~~------------~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN  203 (571)
T d1dx4a_         136 TNGLPILIWIYGGGFMTGSATLDIY------------NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGN  203 (571)
T ss_dssp             CSSEEEEEEECCSTTTCCCTTCGGG------------CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSC
T ss_pred             CCCCeEEEEEeCCCccCCCCccccc------------chhhhhhcCCeeEEeecceeccccccccccccccccccCCCCc
Confidence            3469999999999876544322111            112344 346888887775 2223210       000111123


Q ss_pred             HHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEccCCCC
Q 004475          580 QLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN  637 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~---~id~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~d  637 (751)
                      ..+.|...|++|+++.-   .=||++|-|+|+|.||..+..++...  ...|..+|+.++...
T Consensus       204 ~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~  266 (571)
T d1dx4a_         204 VGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN  266 (571)
T ss_dssp             HHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred             ccchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence            45789999999999852   13799999999999999998776643  347899999888644


No 158
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.20  E-value=7.6e-06  Score=79.05  Aligned_cols=141  Identities=12%  Similarity=0.083  Sum_probs=73.9

Q ss_pred             eeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEE
Q 004475          179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY  258 (751)
Q Consensus       179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~  258 (751)
                      ..+++|+++.+++...+            ...+.+|+............+           ....+..++|+|||++ |+
T Consensus       123 ~~~~~~~~~~~~v~~~~------------~~~v~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~-l~  178 (287)
T d1pgua2         123 GSAVSLSQNYVAVGLEE------------GNTIQVFKLSDLEVSFDLKTP-----------LRAKPSYISISPSETY-IA  178 (287)
T ss_dssp             EEEEEECSSEEEEEETT------------TSCEEEEETTEEEEEEECSSC-----------CSSCEEEEEECTTSSE-EE
T ss_pred             eeeeeccCcceeeeccc------------cceeeeeeccccceeeeeeec-----------cCCceeEEEeccCccc-cc
Confidence            34678888888876543            224678887654332211111           1123558899999998 55


Q ss_pred             EEEeccCCCCccccCcccceeeccCCCCCCCCce--EeEeeceeEE-EEEecCCce----------EEEeeeecccceeE
Q 004475          259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE--ILHKLDLRFS-VSWCDDSLA----------LVNETWYKTSQTRT  325 (751)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~l~~~~~~~~-~~~spdg~~----------l~~~~~~~~~~~~l  325 (751)
                      ...            ..+.+.++++.   .....  ........+. ++|+|+++.          |+..+    ....|
T Consensus       179 ~g~------------~dg~i~i~d~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs----~D~~i  239 (287)
T d1pgua2         179 AGD------------VMGKILLYDLQ---SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS----LDTNI  239 (287)
T ss_dssp             EEE------------TTSCEEEEETT---TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE----TTSCE
T ss_pred             ccc------------ccccccceeec---ccccccccccccccccceeeecccccccccccCCCCeeEeec----CCCeE
Confidence            543            23578888874   22111  1122344566 888887653          33222    22356


Q ss_pred             EEecCCCCCCcceeeeecccccccCCCCCCCeeeCCCCCEEEEee
Q 004475          326 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI  370 (751)
Q Consensus       326 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~~~  370 (751)
                      ++.++..+ .............+..      ++|+||++ |+..+
T Consensus       240 ~iw~~~~~-~~~~~~~~~h~~~V~~------v~~~~~~~-l~s~g  276 (287)
T d1pgua2         240 FIYSVKRP-MKIIKALNAHKDGVNN------LLWETPST-LVSSG  276 (287)
T ss_dssp             EEEESSCT-TCCEEETTSSTTCEEE------EEEEETTE-EEEEE
T ss_pred             EEEECCCC-CeEEEEeCCCCCCeEE------EEECCCCE-EEEEE
Confidence            66666553 2222222222223333      77999985 55544


No 159
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.17  E-value=0.00017  Score=70.43  Aligned_cols=74  Identities=8%  Similarity=-0.029  Sum_probs=48.6

Q ss_pred             eeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CC
Q 004475           88 VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG  166 (751)
Q Consensus        88 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G  166 (751)
                      .+..++|||||++|+..+.+                                                 ..|.++|+ ++
T Consensus        13 ~I~~l~fsp~~~~L~s~s~D-------------------------------------------------g~v~iwd~~~~   43 (342)
T d1yfqa_          13 YISDIKIIPSKSLLLITSWD-------------------------------------------------GSLTVYKFDIQ   43 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEETT-------------------------------------------------SEEEEEEEETT
T ss_pred             CEEEEEEeCCCCEEEEEECC-------------------------------------------------CeEEEEEccCC
Confidence            48899999999999987543                                                 34555565 33


Q ss_pred             -Cceec---CCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee
Q 004475          167 -TAKDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR  222 (751)
Q Consensus       167 -~~~~l---t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~  222 (751)
                       ....+   ..+ ..+..++|+|++..++++...            ...+.+|+.......
T Consensus        44 ~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~------------d~~v~~w~~~~~~~~   92 (342)
T d1yfqa_          44 AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV------------QGEILKVDLIGSPSF   92 (342)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET------------TSCEEEECSSSSSSE
T ss_pred             CcceEEEEecCCCCCEEEEEEeCCCCCEEEEccc------------ccceeeeeccccccc
Confidence             22222   123 678899999987766655433            346888988765433


No 160
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.16  E-value=4.9e-05  Score=73.08  Aligned_cols=122  Identities=16%  Similarity=0.205  Sum_probs=65.0

Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP  254 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~  254 (751)
                      ..+..++|||||++|+....+             ..+.+||..++......           +......+..++|+|+++
T Consensus       163 ~~v~~~~~s~~~~~l~~g~~d-------------g~i~i~d~~~~~~~~~~-----------~~~h~~~v~~~~~~p~~~  218 (287)
T d1pgua2         163 AKPSYISISPSETYIAAGDVM-------------GKILLYDLQSREVKTSR-----------WAFRTSKINAISWKPAEK  218 (287)
T ss_dssp             SCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEECC-----------SCCCSSCEEEEEECCCC-
T ss_pred             CceeEEEeccCcccccccccc-------------ccccceeeccccccccc-----------ccccccccceeeeccccc
Confidence            567889999999999876543             35889999876543210           011122355788988875


Q ss_pred             ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEeeeecccceeEEE
Q 004475          255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNETWYKTSQTRTWL  327 (751)
Q Consensus       255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~  327 (751)
                      ..... . .+ ..........+.|++++++ ........+......+. +.|+||++ |+...  .++.-.||.
T Consensus       219 ~~~~~-~-~~-~~~l~sgs~D~~i~iw~~~-~~~~~~~~~~~h~~~V~~v~~~~~~~-l~s~g--~D~~v~iW~  285 (287)
T d1pgua2         219 GANEE-E-IE-EDLVATGSLDTNIFIYSVK-RPMKIIKALNAHKDGVNNLLWETPST-LVSSG--ADACIKRWN  285 (287)
T ss_dssp             ------C-CS-CCEEEEEETTSCEEEEESS-CTTCCEEETTSSTTCEEEEEEEETTE-EEEEE--TTSCEEEEE
T ss_pred             ccccc-c-CC-CCeeEeecCCCeEEEEECC-CCCeEEEEeCCCCCCeEEEEECCCCE-EEEEE--CCCeEEEEE
Confidence            41111 0 00 0000011123578888874 11222233334455677 99999986 44333  233345664


No 161
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.13  E-value=1.4e-05  Score=81.27  Aligned_cols=144  Identities=15%  Similarity=0.033  Sum_probs=85.9

Q ss_pred             ccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCC-Cc-cccceeeeeEEecCCcEEEEeecCCCC
Q 004475           33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DI-CLNAVFGSFVWVNNSTLLIFTIPSSRR  110 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~-~~-~~~~~~~~~~wspDg~~l~~~~~~~~~  110 (751)
                      +....||||| .||..          .....|.++++.+++........ .. .....+..++|||||+.|+..+.+...
T Consensus       187 ~~~v~~s~dg-~lasg----------s~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~  255 (393)
T d1sq9a_         187 ATSVDISERG-LIATG----------FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF  255 (393)
T ss_dssp             CCEEEECTTS-EEEEE----------CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred             EEEEEECCCC-EEEEE----------eCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCc
Confidence            5678999998 55432          34467888898887643221111 00 001147789999999999887543110


Q ss_pred             CCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCC-ceec-------------CCC-
Q 004475          111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDF-------------GTP-  174 (751)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~-~~~l-------------t~~-  174 (751)
                                                                    ..+.++|+ +|+ ...+             ..+ 
T Consensus       256 ----------------------------------------------~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~  289 (393)
T d1sq9a_         256 ----------------------------------------------GCITLYETEFGERIGSLSVPTHSSQASLGEFAHS  289 (393)
T ss_dssp             ----------------------------------------------EEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred             ----------------------------------------------ceeeecccccceeeeeeccccccccceeeeeccc
Confidence                                                          23455555 442 1111             123 


Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee-eeccCCCCCCCCCccCCccCCCceeeeecCC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADK  253 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG  253 (751)
                      ..+..++|||||++|+-.+.+             ..|.+||+++++.. .+..+.....         .....++|+|+|
T Consensus       290 ~~V~~l~fspd~~~l~S~s~D-------------~~v~vWd~~~g~~~~~l~gH~~~v~---------~~~~~~~~~~~~  347 (393)
T d1sq9a_         290 SWVMSLSFNDSGETLCSAGWD-------------GKLRFWDVKTKERITTLNMHCDDIE---------IEEDILAVDEHG  347 (393)
T ss_dssp             SCEEEEEECSSSSEEEEEETT-------------SEEEEEETTTTEEEEEEECCGGGCS---------SGGGCCCBCTTS
T ss_pred             CceeeeccCCCCCeeEEECCC-------------CEEEEEECCCCCEEEEECCcCCccc---------CCccEEEECCCC
Confidence            568899999999988765443             46899999877644 3332222111         112246888888


Q ss_pred             Cc
Q 004475          254 PS  255 (751)
Q Consensus       254 ~~  255 (751)
                      ..
T Consensus       348 ~~  349 (393)
T d1sq9a_         348 DS  349 (393)
T ss_dssp             CB
T ss_pred             CE
Confidence            76


No 162
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05  E-value=0.00018  Score=70.28  Aligned_cols=135  Identities=8%  Similarity=0.038  Sum_probs=74.2

Q ss_pred             eEEEEEcC-CCCc-eecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCC
Q 004475          157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI  233 (751)
Q Consensus       157 ~~l~~~~~-~G~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  233 (751)
                      ..|.++++ .++. +.+..+ ..+..+  ++++++|+..+.+             ..+.+|+....+...........  
T Consensus       197 g~i~~~d~~~~~~~~~~~~~~~~v~~~--~~~~~~l~s~s~d-------------~~i~iwd~~~~~~~~~~~~~~~~--  259 (342)
T d2ovrb2         197 TSIRVWDVETGNCIHTLTGHQSLTSGM--ELKDNILVSGNAD-------------STVKIWDIKTGQCLQTLQGPNKH--  259 (342)
T ss_dssp             SCEEEEETTTCCEEEEECCCCSCEEEE--EEETTEEEEEETT-------------SCEEEEETTTCCEEEEECSTTSC--
T ss_pred             CeEEEeecccceeeeEecccccceeEE--ecCCCEEEEEcCC-------------CEEEEEeccccccccccccccee--
Confidence            35777777 5533 333333 444444  4456677665432             36889998765543322211110  


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEe-----eceeEE-EEEec
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-----LDLRFS-VSWCD  307 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-----~~~~~~-~~~sp  307 (751)
                               ......++++++. ++..+            ..+.|.+++++.  +...+.+..     ....+. ++|+|
T Consensus       260 ---------~~~~~~~~~~~~~-~~s~s------------~Dg~i~iwd~~t--g~~i~~~~~~~~~~~~~~v~~v~~s~  315 (342)
T d2ovrb2         260 ---------QSAVTCLQFNKNF-VITSS------------DDGTVKLWDLKT--GEFIRNLVTLESGGSGGVVWRIRASN  315 (342)
T ss_dssp             ---------SSCEEEEEECSSE-EEEEE------------TTSEEEEEETTT--CCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred             ---------eeceeecccCCCe-eEEEc------------CCCEEEEEECCC--CCEEEEEecccCCCCCCCEEEEEECC
Confidence                     0112345556665 44443            235788998851  223333332     233466 99999


Q ss_pred             CCceEEEeeeecccceeEEEecCCC
Q 004475          308 DSLALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       308 dg~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                      |+..|+.+....+....|++.|.+-
T Consensus       316 ~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         316 TKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             SEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            9998887764433445788877754


No 163
>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}
Probab=97.83  E-value=1e-05  Score=77.97  Aligned_cols=106  Identities=8%  Similarity=-0.079  Sum_probs=67.4

Q ss_pred             ccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHHh-CCeEEEEcCCCCCCCCCCCCCC---chhHHHHHHHHHH
Q 004475          512 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEA  587 (751)
Q Consensus       512 ~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~  587 (751)
                      +|++|++||..           +  +....+.......++. ..+.|+++|.....    ....   ........+.+..
T Consensus        70 ~pt~iiiHGw~-----------~--~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a----~~~Y~~a~~n~~~Vg~~ia~  132 (337)
T d1rp1a2          70 KKTRFIIHGFI-----------D--KGEENWLLDMCKNMFKVEEVNCICVDWKKGS----QTSYTQAANNVRVVGAQVAQ  132 (337)
T ss_dssp             SEEEEEECCCC-----------C--TTCTTHHHHHHHHHTTTCCEEEEEEECHHHH----SSCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc-----------C--CCCcchHHHHHHHHHhcCCceEEEEeecccc----CcchHHHHHHHHHHHHHHHH
Confidence            69999999941           1  1112222223334444 56999996663211    1110   0112234466778


Q ss_pred             HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          588 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       588 ~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      .|++|.+...+++++|.|+|||+||++|..++.+. ..+..++.+.|.
T Consensus       133 ~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA  179 (337)
T d1rp1a2         133 MLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPV  179 (337)
T ss_dssp             HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCC
T ss_pred             HHHHHHHhcCCChhheEEEeecHHHhhhHHHHHhh-ccccceeccCCC
Confidence            88888776668899999999999999998666655 567888887775


No 164
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.78  E-value=0.0052  Score=57.38  Aligned_cols=114  Identities=9%  Similarity=0.012  Sum_probs=62.9

Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP  254 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~  254 (751)
                      .....+++.++|+ |++....            ...+++++..+........ .           .......++++|+|+
T Consensus        98 ~~p~~iavd~~g~-i~v~d~~------------~~~~~~~~~~~~~~~~~~~-~-----------~~~~p~~i~~~~~g~  152 (260)
T d1rwia_          98 NYPEGLAVDTQGA-VYVADRG------------NNRVVKLAAGSKTQTVLPF-T-----------GLNDPDGVAVDNSGN  152 (260)
T ss_dssp             CSEEEEEECTTCC-EEEEEGG------------GTEEEEECTTCSSCEECCC-C-----------SCCSCCEEEECTTCC
T ss_pred             eecccccccccce-eEeeccc------------cccccccccccceeeeeee-c-----------ccCCcceeeecCCCC
Confidence            4566889999997 4444222            2356677776654332211 1           012245789999997


Q ss_pred             ceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-ceeEE-EEEecCCceEEEeeeecccceeEEEecCCC
Q 004475          255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFS-VSWCDDSLALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       255 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~~~~~-~~~spdg~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                        ++++..           ....|+.++.+   +.....+... ..... +++.++|+ |+++.   .....|+.++.++
T Consensus       153 --~~v~~~-----------~~~~i~~~d~~---~~~~~~~~~~~~~~p~gi~~d~~g~-l~vsd---~~~~~i~~~~~~~  212 (260)
T d1rwia_         153 --VYVTDT-----------DNNRVVKLEAE---SNNQVVLPFTDITAPWGIAVDEAGT-VYVTE---HNTNQVVKLLAGS  212 (260)
T ss_dssp             --EEEEEG-----------GGTEEEEECTT---TCCEEECCCSSCCSEEEEEECTTCC-EEEEE---TTTTEEEEECTTC
T ss_pred             --Eeeecc-----------ccccccccccc---cceeeeeeccccCCCccceeeeeee-eeeee---cCCCEEEEEeCCC
Confidence              455431           23468888775   3333332211 22233 78889987 43333   2235788888776


Q ss_pred             C
Q 004475          333 K  333 (751)
Q Consensus       333 ~  333 (751)
                      .
T Consensus       213 ~  213 (260)
T d1rwia_         213 T  213 (260)
T ss_dssp             S
T ss_pred             C
Confidence            4


No 165
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.72  E-value=2.2e-05  Score=75.40  Aligned_cols=108  Identities=8%  Similarity=-0.090  Sum_probs=69.7

Q ss_pred             CccEEEEEcCCCCcCcccCCcccCCCCccCCCCchHHHHHH-hCCeEEEEcCCCCCCCCCCCCCC---chhHHHHHHHHH
Q 004475          511 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAE  586 (751)
Q Consensus       511 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~  586 (751)
                      .+|++|++||-.           +  +....+.......++ ...+.|+++|.....   .. ..   .......-+.+.
T Consensus        69 ~~pt~iiiHG~~-----------~--~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a---~~-~Y~~a~~n~~~Vg~~ia  131 (338)
T d1bu8a2          69 DRKTRFIVHGFI-----------D--KGEDGWLLDMCKKMFQVEKVNCICVDWRRGS---RT-EYTQASYNTRVVGAEIA  131 (338)
T ss_dssp             TSEEEEEECCSC-----------C--TTCTTHHHHHHHHHHTTCCEEEEEEECHHHH---SS-CHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeCccc-----------C--CCCcccHHHHHHHHHhcCCceEEEEechhhc---cc-chHHHHHhHHHHHHHHH
Confidence            379999999931           1  112222223333444 456999996662211   11 10   011223345666


Q ss_pred             HHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCC
Q 004475          587 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS  635 (751)
Q Consensus       587 ~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~  635 (751)
                      ..|++|.....++.++|.|+|||+||++|-.+..+-+.++..++.+.|.
T Consensus       132 ~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA  180 (338)
T d1bu8a2         132 FLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA  180 (338)
T ss_dssp             HHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred             HHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccC
Confidence            7778776665678899999999999999999998877778888887775


No 166
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.64  E-value=0.0049  Score=57.92  Aligned_cols=54  Identities=15%  Similarity=0.068  Sum_probs=35.3

Q ss_pred             eecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeec
Q 004475           37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIP  106 (751)
Q Consensus        37 ~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~  106 (751)
                      .+++||++||..+          ..+.|.++++.+++..+...+...    .+..  .++|++.|+..+.
T Consensus        20 c~~~d~~~l~sgs----------~Dg~i~vWd~~~~~~~~~l~~H~~----~V~~--v~~~~~~l~s~s~   73 (293)
T d1p22a2          20 CLQYDDQKIVSGL----------RDNTIKIWDKNTLECKRILTGHTG----SVLC--LQYDERVIITGSS   73 (293)
T ss_dssp             EEECCSSEEEEEE----------SSSCEEEEESSSCCEEEEECCCSS----CEEE--EECCSSEEEEEET
T ss_pred             EEEEcCCEEEEEe----------CCCeEEEEECCCCcEEEEEecCCC----CEee--eecccceeecccc
Confidence            5889999988753          336677789888886554433221    2444  4558888877643


No 167
>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.45  E-value=0.00015  Score=67.89  Aligned_cols=52  Identities=12%  Similarity=0.079  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEccCCC
Q 004475          584 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSY  636 (751)
Q Consensus       584 d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~  636 (751)
                      .+..+.+.|++... ..++|-++||||||.++-.++.+.+. .+..+|.+++..
T Consensus        64 ~~e~v~~~I~~~~~-~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH  116 (279)
T d1ei9a_          64 QVTTVCQILAKDPK-LQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH  116 (279)
T ss_dssp             HHHHHHHHHHSCGG-GTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred             HHHHHHHHHHhccc-cccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence            33444455543221 23589999999999999999988875 588888888753


No 168
>g1wht.1 c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat (Triticum vulgare) [TaxId: 4565]}
Probab=97.43  E-value=0.0028  Score=63.75  Aligned_cols=149  Identities=15%  Similarity=0.027  Sum_probs=79.3

Q ss_pred             EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCccc-CCCCccCCCCc---hHHHHHHhCCeEEEE
Q 004475          484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGMTP---TSSLIFLARRFAVLA  559 (751)
Q Consensus       484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~G~~v~~  559 (751)
                      +.+....+..+..+++.. ..++.   +.|+||++-|||.++.=..+.+. -+|.....-..   .....+.+. ..++.
T Consensus        25 l~v~~~~~~~lfy~f~es-~~~p~---~~Pl~lWlnGGPG~SS~~~g~f~e~GP~~i~~~~~~~~~N~~sW~~~-anllf   99 (409)
T g1wht.1          25 ITVDEGAGRSLFYLLQEA-PEDAQ---PAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVLF   99 (409)
T ss_dssp             EEEETTTTEEEEEEEECC-CGGGC---SCCEEEEECCTTTBCTTTTHHHHSSSSEEECGGGCCEEECTTCGGGT-SEEEE
T ss_pred             eEcCCCCCeEEEEEEEEc-CCCCC---CCCEEEEECCCCCHHHHHHHHhccCCCcEecCCCCcccccCcccccc-ccEEE
Confidence            455544455666666643 32332   37999999999865541112221 12222211000   011112222 34455


Q ss_pred             cCCCCCCCCCCCCCCc----hhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CCC---ceeE
Q 004475          560 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APH---LFCC  628 (751)
Q Consensus       560 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v-~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~---~p~---~~~~  628 (751)
                      +|.+...|+.-.....    ....+...|+..++ .|+.+.+.....++.|+|-|+||..+..+|..   ..+   .+++
T Consensus       100 iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yiP~ia~~i~~~~~~~~nL~G  179 (409)
T g1wht.1         100 LDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKG  179 (409)
T ss_dssp             ECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHSGGGTTCEEEEEEETTHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred             EeccCCceeeccCCCCCccccCcHHHHHHHHHHHHHHHHhcccccCCCeeEEeecccchhhHHHHHHHHHcCCcccccee
Confidence            5655555654222111    11234456666655 44444555555689999999999888777632   112   4899


Q ss_pred             EEEccCCCC
Q 004475          629 GIARSGSYN  637 (751)
Q Consensus       629 ~v~~~~~~d  637 (751)
                      +++..|+.+
T Consensus       180 i~igng~~d  188 (409)
T g1wht.1         180 FMVGNGLID  188 (409)
T ss_dssp             EEEESCCCB
T ss_pred             eEecCcccC
Confidence            999998755


No 169
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.19  E-value=0.065  Score=50.11  Aligned_cols=132  Identities=8%  Similarity=0.074  Sum_probs=70.5

Q ss_pred             eEEEEEcCCCCc-eecCCC--ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCC
Q 004475          157 AQLVLGSLDGTA-KDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI  233 (751)
Q Consensus       157 ~~l~~~~~~G~~-~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  233 (751)
                      ..|...+.+|+. ..+...  .....++..++|+.++.. ..            ...+++++.+++....+.....    
T Consensus        93 ~~i~~~~~~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~-~~------------~~~~~~~~~~g~~~~~~g~~~~----  155 (279)
T d1q7fa_          93 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVE-CK------------VMRVIIFDQNGNVLHKFGCSKH----  155 (279)
T ss_dssp             CEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEE-TT------------TTEEEEECTTSCEEEEEECTTT----
T ss_pred             cccccccccccceeecCCCcccccceeccccCCcEEEEe-ec------------cceeeEeccCCceeeccccccc----
Confidence            367777777743 233222  445678888999754432 21            2357788887765544322111    


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeece---eEE-EEEecCC
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---RFS-VSWCDDS  309 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~---~~~-~~~spdg  309 (751)
                             ......+++.++|+  ++++..           ....|++++.+   +.....+. ..+   ... +++.++|
T Consensus       156 -------~~~~~~i~~d~~g~--i~v~d~-----------~~~~V~~~d~~---G~~~~~~g-~~g~~~~P~giavD~~G  211 (279)
T d1q7fa_         156 -------LEFPNGVVVNDKQE--IFISDN-----------RAHCVKVFNYE---GQYLRQIG-GEGITNYPIGVGINSNG  211 (279)
T ss_dssp             -------CSSEEEEEECSSSE--EEEEEG-----------GGTEEEEEETT---CCEEEEES-CTTTSCSEEEEEECTTC
T ss_pred             -------ccccceeeecccee--EEeeec-----------cccceeeeecC---Cceeeeec-ccccccCCcccccccCC
Confidence                   11234677888885  555431           22467777764   43222221 111   123 7889999


Q ss_pred             ceEEEeeeecccceeEEEecCCC
Q 004475          310 LALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       310 ~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                      + |+++..  .....|.+.+.++
T Consensus       212 ~-i~Vad~--~~~~~v~~f~~~G  231 (279)
T d1q7fa_         212 E-ILIADN--HNNFNLTIFTQDG  231 (279)
T ss_dssp             C-EEEEEC--SSSCEEEEECTTS
T ss_pred             e-EEEEEC--CCCcEEEEECCCC
Confidence            8 444321  1223577777765


No 170
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.13  E-value=0.037  Score=51.26  Aligned_cols=131  Identities=11%  Similarity=-0.021  Sum_probs=70.8

Q ss_pred             eEEEEEcCCCCc-eecCCC--ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCC
Q 004475          157 AQLVLGSLDGTA-KDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI  233 (751)
Q Consensus       157 ~~l~~~~~~G~~-~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  233 (751)
                      ..++.++..+.. ......  .....++++|+|+ |++....            ...++.++.++.....+....     
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-~~v~~~~------------~~~i~~~d~~~~~~~~~~~~~-----  180 (260)
T d1rwia_         119 NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD------------NNRVVKLEAESNNQVVLPFTD-----  180 (260)
T ss_dssp             TEEEEECTTCSSCEECCCCSCCSCCEEEECTTCC-EEEEEGG------------GTEEEEECTTTCCEEECCCSS-----
T ss_pred             ccccccccccceeeeeeecccCCcceeeecCCCC-Eeeeccc------------cccccccccccceeeeeeccc-----
Confidence            356667765522 222211  3445788899997 5554322            346888998876544321111     


Q ss_pred             CCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeec-eeEE-EEEecCCce
Q 004475          234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFS-VSWCDDSLA  311 (751)
Q Consensus       234 ~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~-~~~spdg~~  311 (751)
                             -..+.+++++++|+  |+++..           ....|+.++.+   +.....+.... .... +++++||. 
T Consensus       181 -------~~~p~gi~~d~~g~--l~vsd~-----------~~~~i~~~~~~---~~~~~~~~~~~~~~P~~i~~d~~g~-  236 (260)
T d1rwia_         181 -------ITAPWGIAVDEAGT--VYVTEH-----------NTNQVVKLLAG---STTSTVLPFTGLNTPLAVAVDSDRT-  236 (260)
T ss_dssp             -------CCSEEEEEECTTCC--EEEEET-----------TTTEEEEECTT---CSCCEECCCCSCCCEEEEEECTTCC-
T ss_pred             -------cCCCccceeeeeee--eeeeec-----------CCCEEEEEeCC---CCeEEEEccCCCCCeEEEEEeCCCC-
Confidence                   12245789999986  565441           23467777764   33333332222 2234 78889986 


Q ss_pred             EEEeeeecccceeEEEecCCC
Q 004475          312 LVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       312 l~~~~~~~~~~~~l~~~~~~~  332 (751)
                      |+++. .  ...+|+.++..+
T Consensus       237 l~vad-~--~~~rI~~i~~~~  254 (260)
T d1rwia_         237 VYVAD-R--GNDRVVKLTSLE  254 (260)
T ss_dssp             EEEEE-G--GGTEEEEECCCG
T ss_pred             EEEEE-C--CCCEEEEEeCCC
Confidence            44432 2  234677666543


No 171
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.02  E-value=0.00092  Score=65.19  Aligned_cols=121  Identities=12%  Similarity=0.032  Sum_probs=69.7

Q ss_pred             ccceeec-----CCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecC
Q 004475           33 INFVSWS-----PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS  107 (751)
Q Consensus        33 ~~~p~~S-----PDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~  107 (751)
                      ..+|.+|     +||||| |+..        ....+|.++++++-+..+++..+...   +...++-+++++..+.....
T Consensus        85 ~HHP~~S~TdGtyDGryl-FVND--------kan~RVAvIdl~~fkt~kIi~iPn~~---~~HG~r~~~~p~T~YV~~~~  152 (459)
T d1fwxa2          85 LHHVHMSFTEGKYDGRFL-FMND--------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG  152 (459)
T ss_dssp             BCCEEEEEETTEEEEEEE-EEEE--------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred             cCCCcccccCCccceeEE-EEEc--------CCCceEEEEECcceeeeEEEecCCCC---CCceeecccCCCeEEEEccC
Confidence            3566665     589887 4433        56789999999999888877655422   24455666666654443221


Q ss_pred             CCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhh--eeeEEEEEcC-CC-CceecCCCceEEeeeeC
Q 004475          108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY--TTAQLVLGSL-DG-TAKDFGTPAVYTAVEPS  183 (751)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-~G-~~~~lt~~~~~~~~~~S  183 (751)
                      +...                               +.+.|+..+...  ..+.+..+|. +. ...++.-.+......+|
T Consensus       153 e~~v-------------------------------P~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g~ld~~~~s  201 (459)
T d1fwxa2         153 EDET-------------------------------PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDAD  201 (459)
T ss_dssp             CSCE-------------------------------ESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred             cccc-------------------------------ccCCCCccccchhhcceEEEEEecCCceEEEEeeeCCChhccccC
Confidence            1110                               001111111100  2245667787 44 23344333556689999


Q ss_pred             CCCceEEEEEecC
Q 004475          184 PDQKYVLITSMHR  196 (751)
Q Consensus       184 pDG~~i~~~~~~~  196 (751)
                      ||||++++++.+.
T Consensus       202 ~dGK~af~TsyNS  214 (459)
T d1fwxa2         202 YEGKWAFSTSYNS  214 (459)
T ss_dssp             SSSSEEEEEESCT
T ss_pred             CCCCEEEEEeccc
Confidence            9999999987553


No 172
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.98  E-value=0.13  Score=47.25  Aligned_cols=51  Identities=10%  Similarity=0.148  Sum_probs=32.1

Q ss_pred             eEEEEEcC-CCCc-eecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceee
Q 004475          157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR  222 (751)
Q Consensus       157 ~~l~~~~~-~G~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~  222 (751)
                      ..|.++|+ +++. +.+..+ ..+..++|  |+++|+..+.+             ..+.+|+...+...
T Consensus        35 g~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D-------------~~i~~~~~~~~~~~   88 (293)
T d1p22a2          35 NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD-------------STVRVWDVNTGEML   88 (293)
T ss_dssp             SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-------------SCEEEEESSSCCEE
T ss_pred             CeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccc-------------cccccccccccccc
Confidence            45777788 6644 444444 66666655  78877765433             35788988766443


No 173
>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.92  E-value=0.024  Score=56.91  Aligned_cols=141  Identities=9%  Similarity=0.003  Sum_probs=72.7

Q ss_pred             CceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCcccC-CCCccCCCCc--hHHHHHHhCCeEEEEcCCCCCCC
Q 004475          491 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-SPNEFSGMTP--TSSLIFLARRFAVLAGPSIPIIG  567 (751)
Q Consensus       491 ~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~G~~v~~~~~~~~~g  567 (751)
                      +..+..|++ ++..++.   ..|+||++-|||.++.- .+.+.. +|-....-..  .....+.+. ..++.+|.+-..|
T Consensus        27 ~~~lfyw~~-~s~~~~~---~~Pl~~WlnGGPG~SS~-~g~~~e~GP~~i~~~~~~~~N~~sW~~~-anllfiD~PvGtG  100 (421)
T d1wpxa1          27 DKHFFFWTF-ESRNDPA---KDPVILWLNGGPGCSSL-TGLFFELGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQPVNVG  100 (421)
T ss_dssp             CCEEEEEEE-CCSSCTT---TSCEEEEECCTTTBCTH-HHHHHTTSSEEECTTSCEEECTTCGGGS-SEEEEECCSTTST
T ss_pred             CceEEEEEE-EeCCCCC---CCCEEEEECCCCcHHHH-HHHHHhcCCcEECCCCccccCCcccccc-cCEEEEecCCCCC
Confidence            345666655 4333333   36999999999855431 111111 1111100000  000111222 3445556555666


Q ss_pred             CCCCCCCc-hhHHHHHHHHHHHHH-HHHHcCCC--CCCcEEEEEeChHHHHHHHHHHh---CC---CceeEEEEccCCCC
Q 004475          568 EGDKLPND-RFVEQLVSSAEAAVE-EVVRRGVA--DPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGIARSGSYN  637 (751)
Q Consensus       568 ~g~~~~~~-~~~~~~~~d~~~~v~-~l~~~~~i--d~~~i~l~G~S~GG~~a~~~a~~---~p---~~~~~~v~~~~~~d  637 (751)
                      ++...... .-.....+|+.++++ |+...+..  ...++.|.|-|+||..+..+|.+   ..   -.++++++..|+.+
T Consensus       101 fSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d  180 (421)
T d1wpxa1         101 FSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD  180 (421)
T ss_dssp             TCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred             ceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence            55322211 122344566666553 33333332  23579999999999999888743   22   23789999888755


No 174
>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}
Probab=96.79  E-value=0.015  Score=59.48  Aligned_cols=64  Identities=16%  Similarity=0.106  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCCCCCCCChHHHHHHHHHHH--------hC--------------------C-----CcEEEEEeCCCCCc
Q 004475          672 KKPILIIHGEVDDKVGLFPMQAERFFDALK--------GH--------------------G-----ALSRLVLLPFEHHV  718 (751)
Q Consensus       672 ~~P~li~~G~~D~~vp~~~~~~~~~~~~l~--------~~--------------------~-----~~~~~~~~~~~~H~  718 (751)
                      ..++||.+|..|..||  ...++...++|.        ..                    |     ....+.++.++||.
T Consensus       372 girVLIy~Gd~D~icn--~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHm  449 (483)
T d1ac5a_         372 GIEIVLFNGDKDLICN--NKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHM  449 (483)
T ss_dssp             TCEEEEEEETTCSTTC--HHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSS
T ss_pred             CCEEEEEECChhhcCC--CHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCcccc
Confidence            3689999999999998  889988888873        10                    0     13678899999998


Q ss_pred             CCccccHHHHHHHHHHHHHH
Q 004475          719 YAARENVMHVIWETDRWLQK  738 (751)
Q Consensus       719 ~~~~~~~~~~~~~~~~fl~~  738 (751)
                      .. ...+...+..+.+||.+
T Consensus       450 vP-~dqP~~a~~mi~~fl~~  468 (483)
T d1ac5a_         450 VP-FDKSLVSRGIVDIYSND  468 (483)
T ss_dssp             HH-HHCHHHHHHHHHHHTTC
T ss_pred             Cc-ccCHHHHHHHHHHHhCC
Confidence            74 44556666666666653


No 175
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=96.51  E-value=0.019  Score=55.72  Aligned_cols=108  Identities=9%  Similarity=0.095  Sum_probs=61.9

Q ss_pred             CCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecCCCceEEEEEe
Q 004475          183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA  262 (751)
Q Consensus       183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~~i~~~~~  262 (751)
                      .+|||+|++....            +..+-++|+++-+..++...|-.           .+...+..+++++...+++..
T Consensus        96 tyDGrylFVNDka------------n~RVAvIdl~~fkt~kIi~iPn~-----------~~~HG~r~~~~p~T~YV~~~~  152 (459)
T d1fwxa2          96 KYDGRFLFMNDKA------------NTRVARVRCDVMKCDAILEIPNA-----------KGIHGLRPQKWPRSNYVFCNG  152 (459)
T ss_dssp             EEEEEEEEEEETT------------TTEEEEEETTTTEEEEEEECSSC-----------CSEEEEEECCSSBCSEEEEEE
T ss_pred             ccceeEEEEEcCC------------CceEEEEECcceeeeEEEecCCC-----------CCCceeecccCCCeEEEEccC
Confidence            3499999987544            45789999998877776555433           223356777778774455443


Q ss_pred             ccC------C-CCccccCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEee
Q 004475          263 QDR------G-DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNET  316 (751)
Q Consensus       263 ~~~------~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~  316 (751)
                      +..      + ........++.+-.+|.+   ......-....+... ..+++||+++++++
T Consensus       153 e~~vP~pndg~~l~d~~~y~~~~t~ID~~---tm~V~~QV~V~g~ld~~~~s~dGK~af~Ts  211 (459)
T d1fwxa2         153 EDETPLVNDGTNMEDVANYVNVFTAVDAD---KWEVAWQVLVSGNLDNCDADYEGKWAFSTS  211 (459)
T ss_dssp             CSCEESSCSSSSTTCGG-EEEEEEEEETT---TTEEEEEEEESSCCCCEEECSSSSEEEEEE
T ss_pred             ccccccCCCCccccchhhcceEEEEEecC---CceEEEEeeeCCChhccccCCCCCEEEEEe
Confidence            311      0 000001122345566664   222211112344555 89999999988765


No 176
>g1gxs.1 c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [TaxId: 4558]}
Probab=96.48  E-value=0.12  Score=51.75  Aligned_cols=149  Identities=11%  Similarity=0.022  Sum_probs=74.2

Q ss_pred             EEEEcCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCccc-CCCCccCCCCc---hHHHHHHhCCeEEEE
Q 004475          484 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGMTP---TSSLIFLARRFAVLA  559 (751)
Q Consensus       484 i~~~~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~G~~v~~  559 (751)
                      +.+....+..+..|++.....++.   ..|++|++-|||.++.-..|.+. -+|.....-..   .....+.+. ..+|.
T Consensus        26 l~v~~~~~~~lfyw~~es~~~dp~---~~Pl~lwlnGGPG~SSl~~G~f~e~GP~~v~~~~~~~~~N~~SW~~~-anllf  101 (425)
T g1gxs.1          26 VTIDDNNGRALYYWFQEADTADPA---AAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANILF  101 (425)
T ss_dssp             EEEETTTTEEEEEEEECCCSSCGG---GSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEEEE
T ss_pred             eEcCCCCCeEEEEEEEEecCCCCC---CCCEEEEECCCCCHHHHHHHHhhCCCCcEecCCCcccccCCCchhhc-eeeEE
Confidence            555555566787776644333333   36999999999865541112221 12222211100   011122333 34444


Q ss_pred             cCCCCCCCCCCCCCCc---hhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEEeChH--HHHHHHHHHhCCC----ceeEE
Q 004475          560 GPSIPIIGEGDKLPND---RFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYG--AFMTAHLLAHAPH----LFCCG  629 (751)
Q Consensus       560 ~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v-~~l~~~~~id~~~i~l~G~S~G--G~~a~~~a~~~p~----~~~~~  629 (751)
                      +|.+-..|++......   .......+|+..++ .|+...+.....++.|.|.|.+  ..++..+......    .++++
T Consensus       102 IDqPvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~gesg~y~p~~a~~i~~~~~~~~~inl~gi  181 (425)
T g1gxs.1         102 AESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGESGHFIPQLSQVVYRNRNNSPFINFQGL  181 (425)
T ss_dssp             ECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEECTTHHHHHHHHHHHTTTTCTTCEEEEE
T ss_pred             eecccCcccccCCCCcccccChHHHHHHHHHHHHHHHHhChhhcCCCeeEeecccccchHHHHHHHHhccCCCccceeee
Confidence            4554455554322221   11334556666666 3444445555568999999933  2233333322211    47888


Q ss_pred             EEccCCC
Q 004475          630 IARSGSY  636 (751)
Q Consensus       630 v~~~~~~  636 (751)
                      ++..|..
T Consensus       182 ~igng~~  188 (425)
T g1gxs.1         182 LVSSGLT  188 (425)
T ss_dssp             EEESCCC
T ss_pred             eccCCcc
Confidence            8877763


No 177
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Probab=96.41  E-value=0.075  Score=45.47  Aligned_cols=117  Identities=17%  Similarity=0.184  Sum_probs=74.1

Q ss_pred             eeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCC
Q 004475           36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK  115 (751)
Q Consensus        36 p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~  115 (751)
                      -+..=||+.|||+...       .+...||+++  +|+.+.|+..+.-.       +.=.-.|++|+=...-..      
T Consensus       107 ~S~~yddk~vvF~Gas-------ed~~~LYvie--gGklrkL~~vPpFs-------FVtDI~~d~I~G~g~~~g------  164 (313)
T d2hu7a1         107 LSGVDTGEAVVFTGAT-------EDRVALYALD--GGGLRELARLPGFG-------FVSDIRGDLIAGLGFFGG------  164 (313)
T ss_dssp             EEEEECSSCEEEEEEC-------SSCEEEEEEE--TTEEEEEEEESSCE-------EEEEEETTEEEEEEEEET------
T ss_pred             EEeeecCceEEEeccc-------CCceEEEEEe--CCceeeeccCCCcc-------eEEeccCCeEEEEeeecC------
Confidence            3456799999998642       4557788776  89999997666421       111123666653311000      


Q ss_pred             CCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC-ceEEeeeeCCCCceEEEEE
Q 004475          116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITS  193 (751)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~  193 (751)
                                                             ....+++-|+ +|..+-+|.. +.+..+..+|+.|.+.-..
T Consensus       165 ---------------------------------------~~~sfF~adl~SG~lri~tpkeGS~~~ay~~~gnKV~sdyE  205 (313)
T d2hu7a1         165 ---------------------------------------GRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLE  205 (313)
T ss_dssp             ---------------------------------------TEEEEEEEETTTEEEEEECCSSEEEEEEEECTTSCEEEEEE
T ss_pred             ---------------------------------------CcceEEEEecccCCEEEecCCCCcccceeEccCceeeeccC
Confidence                                                   1145899999 8899999988 8888999999998733222


Q ss_pred             ecCCcccccccCCCceeEEEEeCCCceeeee
Q 004475          194 MHRPYSYKVPCARFSQKVQVWTTDGKLVREL  224 (751)
Q Consensus       194 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l  224 (751)
                      ..+           ...+..+|+..+..+++
T Consensus       206 t~g-----------Esywit~D~~s~~yerv  225 (313)
T d2hu7a1         206 TAR-----------EARLVTVDPRDGSVEDL  225 (313)
T ss_dssp             ESS-----------CEEEEEECTTTCCEEEC
T ss_pred             CCC-----------ceEEEEEecccCceeee
Confidence            221           11222568887766655


No 178
>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.87  E-value=0.11  Score=52.45  Aligned_cols=144  Identities=13%  Similarity=-0.005  Sum_probs=79.5

Q ss_pred             cCCCceEEEEEEcCCCCCCCCCCCccEEEEEcCCCCcCcccCCccc-CCCCccCCCCc---hHHHHHHhCCeEEEEcCCC
Q 004475          488 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGMTP---TSSLIFLARRFAVLAGPSI  563 (751)
Q Consensus       488 ~~~~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~G~~v~~~~~~  563 (751)
                      ...+..+..|++.. ..++.   ..|+++++-|||.++.-. +.+. -+|..+..-..   .....+.+. ..+|.+|.+
T Consensus        28 ~~~~~~lffw~~~s-~~~~~---~~Pl~~wlnGGPG~SS~~-g~~~e~GP~~v~~~~~~~~~N~~SW~~~-anllfIDqP  101 (452)
T d1ivya_          28 SSGSKHLHYWFVES-QKDPE---NSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYLESP  101 (452)
T ss_dssp             CSTTEEEEEEEECC-SSCGG---GSCEEEEECCTTTBCTHH-HHHTTTSSEEECTTSSCEEECTTCGGGS-SEEEEECCS
T ss_pred             cCCCceEEEEEEEc-CCCCC---CCCEEEEECCCCcHHHHH-HHHHccCCcEEcCCCCeeccCCcchhcc-cCEEEEecC
Confidence            34555677666643 32332   379999999998654311 1111 11211111000   011122333 344444554


Q ss_pred             CCCCCCCCCC--CchhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CC-CceeEEEEccCCC
Q 004475          564 PIIGEGDKLP--NDRFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP-HLFCCGIARSGSY  636 (751)
Q Consensus       564 ~~~g~g~~~~--~~~~~~~~~~d~~~~v-~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~---~p-~~~~~~v~~~~~~  636 (751)
                      -..|++....  ...-......|+.+++ +|+...+.....++.|+|-|+||..+..+|..   .+ -.++++++.+|+.
T Consensus       102 vGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~  181 (452)
T d1ivya_         102 AGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS  181 (452)
T ss_dssp             TTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred             CCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence            4566543221  1222345566665555 66666555556789999999999999988753   22 2489999999886


Q ss_pred             C
Q 004475          637 N  637 (751)
Q Consensus       637 d  637 (751)
                      +
T Consensus       182 d  182 (452)
T d1ivya_         182 S  182 (452)
T ss_dssp             B
T ss_pred             C
Confidence            5


No 179
>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.80  E-value=0.0082  Score=58.62  Aligned_cols=36  Identities=14%  Similarity=0.120  Sum_probs=28.6

Q ss_pred             CcEEEEEeChHHHHHHHHHHhCC-------------------------CceeEEEEccCCC
Q 004475          601 SRIAVGGHSYGAFMTAHLLAHAP-------------------------HLFCCGIARSGSY  636 (751)
Q Consensus       601 ~~i~l~G~S~GG~~a~~~a~~~p-------------------------~~~~~~v~~~~~~  636 (751)
                      .||-|+||||||.-+=+++..-|                         +.++.+..++.+.
T Consensus       105 ~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH  165 (388)
T d1ku0a_         105 GRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATPH  165 (388)
T ss_dssp             CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred             CceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccCCC
Confidence            58999999999999988876432                         2588888888653


No 180
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.71  E-value=0.77  Score=42.22  Aligned_cols=116  Identities=13%  Similarity=0.192  Sum_probs=64.1

Q ss_pred             eEEEEEcCCCCc-eecC--CC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCC
Q 004475          157 AQLVLGSLDGTA-KDFG--TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED  232 (751)
Q Consensus       157 ~~l~~~~~~G~~-~~lt--~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~  232 (751)
                      ..+++++.+|+. ..+.  .. .....++..++|+ |+++...            ...+++++.++.....+. .++.. 
T Consensus       135 ~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~-i~v~d~~------------~~~V~~~d~~G~~~~~~g-~~g~~-  199 (279)
T d1q7fa_         135 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIG-GEGIT-  199 (279)
T ss_dssp             TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEES-CTTTS-
T ss_pred             ceeeEeccCCceeecccccccccccceeeecccee-EEeeecc------------ccceeeeecCCceeeeec-ccccc-
Confidence            356677776643 2221  12 4556788888886 4444322            346889999887655542 11111 


Q ss_pred             CCCccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEee-c-eeEE-EEEecCC
Q 004475          233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-D-LRFS-VSWCDDS  309 (751)
Q Consensus       233 ~~~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-~-~~~~-~~~spdg  309 (751)
                               ..+.++++.|+|+  |+++...          .+..|.+++.+   +.-...+... . .... ++..|||
T Consensus       200 ---------~~P~giavD~~G~--i~Vad~~----------~~~~v~~f~~~---G~~~~~~~~~~~~~~p~~vav~~dG  255 (279)
T d1q7fa_         200 ---------NYPIGVGINSNGE--ILIADNH----------NNFNLTIFTQD---GQLISALESKVKHAQCFDVALMDDG  255 (279)
T ss_dssp             ---------CSEEEEEECTTCC--EEEEECS----------SSCEEEEECTT---SCEEEEEEESSCCSCEEEEEEETTT
T ss_pred             ---------cCCcccccccCCe--EEEEECC----------CCcEEEEECCC---CCEEEEEeCCCCCCCEeEEEEeCCC
Confidence                     2245789999997  5554311          12356676654   4323333221 1 1234 7889999


Q ss_pred             ce
Q 004475          310 LA  311 (751)
Q Consensus       310 ~~  311 (751)
                      +.
T Consensus       256 ~l  257 (279)
T d1q7fa_         256 SV  257 (279)
T ss_dssp             EE
T ss_pred             cE
Confidence            73


No 181
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=94.98  E-value=2  Score=42.55  Aligned_cols=61  Identities=15%  Similarity=0.208  Sum_probs=38.7

Q ss_pred             ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCCCCCCCccCCccCCCceeeeecC
Q 004475          175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD  252 (751)
Q Consensus       175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~spd  252 (751)
                      .....++|.|||+.++..+ .            ...|++++.++++.+.+...+....    ....+.+...++++||
T Consensus        27 ~~P~~la~~pdg~llVter-~------------~G~i~~v~~~~g~~~~i~~~~~~~~----~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTER-A------------TGKILRVNPESGSVKTVFQVPEIVN----DADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEET-T------------TCEEEEECTTTCCEEEEEECTTCCC----CTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEe-c------------CCEEEEEECCCCcEeecccCCcccc----ccCCCCceeeEEeCCC
Confidence            4566899999997554431 1            2468899988887776655442211    1123345668999986


No 182
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=93.76  E-value=1  Score=42.71  Aligned_cols=162  Identities=17%  Similarity=0.068  Sum_probs=80.3

Q ss_pred             ceeEEeecCCCCCCCCcccccCC---CCcccc--c--ceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeec
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGY---PDGAKI--N--FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL   77 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~---~~~~~~--~--~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~l   77 (751)
                      -.|+++|+..  ...+.+.+.-.   +.....  .  ...-.+||+...|+.+..    .......+|.++.++.+.+.+
T Consensus        68 G~i~~~dl~~--~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~----~~~~~ieif~~~~~~~~l~~~  141 (340)
T d1v04a_          68 GKILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP----GSSSTVEVFKFQEEEKSLLHL  141 (340)
T ss_dssp             CEEEEEETTS--SSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECS----TTCCEEEEEEEETTTTEEEEE
T ss_pred             CeEEEEecCC--CCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEecc----CCCceeEEEEEeCCCCeEEEE
Confidence            4688999987  33334333311   111000  1  122356787777766521    113345677776555443333


Q ss_pred             cCCCCccccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheee
Q 004475           78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA  157 (751)
Q Consensus        78 t~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (751)
                      ......... ..+.++...||. ++++........                     ..+....          +.....+
T Consensus       142 ~~v~~~~~~-~pNDv~~~~~g~-fy~Tnd~~~~~~---------------------~~~~~e~----------~~~~~~g  188 (340)
T d1v04a_         142 KTIRHKLLP-SVNDIVAVGPEH-FYATNDHYFIDP---------------------YLKSWEM----------HLGLAWS  188 (340)
T ss_dssp             EEECCTTCS-SEEEEEEEETTE-EEEEESCSCCSH---------------------HHHHHHH----------HTTCCCE
T ss_pred             eecCCcccc-CccceEEecCCC-EEEecCccCcCh---------------------hhhhhhH----------hhcCCce
Confidence            222221111 356888888886 555532211000                     0000000          0011234


Q ss_pred             EEEEEcCCCCceecCCC-ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCC
Q 004475          158 QLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG  218 (751)
Q Consensus       158 ~l~~~~~~G~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~  218 (751)
                      .++.++. ++.+.+... .....+++|||+++|+++...            ...|++|++++
T Consensus       189 ~v~~~~~-~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~------------~~~i~~y~~~~  237 (340)
T d1v04a_         189 FVTYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELL------------AHKIHVYEKHA  237 (340)
T ss_dssp             EEEEECS-SCEEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEECT
T ss_pred             eEEEEcC-CceEEEcCCCCccceeEECCCCCEEEEEeCC------------CCeEEEEEeCC
Confidence            5666654 233333333 455689999999999998654            34677777764


No 183
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=93.69  E-value=3.2  Score=39.72  Aligned_cols=138  Identities=10%  Similarity=0.006  Sum_probs=75.3

Q ss_pred             ccceeecCCCCeEEEEEeeccc-ccccCCceeEEEEEcCCCCeeeccCCCCccccceeeeeEEecCCcEEEEeecCCCCC
Q 004475           33 INFVSWSPDGKRIAFSVRVDEE-DNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD  111 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~~~~~-~~~~~~~~~l~i~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~  111 (751)
                      ........|||.++|-...+.. .........++++|+.++..+++....... .......++.+||+.+++.....   
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-~~~~~~~~~~~~g~i~v~Gg~~~---   97 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-DMFCPGISMDGNGQIVVTGGNDA---   97 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-CCSSCEEEECTTSCEEEECSSST---
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCc-ccceeEEEEecCCcEEEeecCCC---
Confidence            3445667788777764322111 111123346789999988765543221110 00123457889998777652210   


Q ss_pred             CCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEcC-CCCceecCCC---ceEEeeeeCCCCc
Q 004475          112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP---AVYTAVEPSPDQK  187 (751)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~G~~~~lt~~---~~~~~~~~SpDG~  187 (751)
                                                                   ..++++|. +..-+++...   ......+..+||+
T Consensus        98 ---------------------------------------------~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~  132 (387)
T d1k3ia3          98 ---------------------------------------------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR  132 (387)
T ss_dssp             ---------------------------------------------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred             ---------------------------------------------cceeEecCccCcccccccccccccccceeeecCCc
Confidence                                                         23455666 4433333222   3445677788999


Q ss_pred             eEEEEEecCCcccccccCCCceeEEEEeCCCceeeeecc
Q 004475          188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD  226 (751)
Q Consensus       188 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~  226 (751)
                      .+++-....       ......++++||+.+.+-..+..
T Consensus       133 v~v~GG~~~-------~~~~~~~v~~yd~~~~~W~~~~~  164 (387)
T d1k3ia3         133 VFTIGGSWS-------GGVFEKNGEVYSPSSKTWTSLPN  164 (387)
T ss_dssp             EEEECCCCC-------SSSCCCCEEEEETTTTEEEEETT
T ss_pred             eeeeccccc-------cccccceeeeecCCCCceeecCC
Confidence            777643322       12224678999999887665543


No 184
>d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]}
Probab=93.01  E-value=0.07  Score=49.04  Aligned_cols=41  Identities=24%  Similarity=0.229  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          579 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       579 ~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      ..+.+++...++.+.+...  ..+|.+.|||+||.+|..++..
T Consensus       113 ~~~~~~i~~~v~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~  153 (265)
T d1lgya_         113 EQVVNDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMD  153 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCC--CceEEEEecccchHHHHHHHHH
Confidence            3455666666766655432  3689999999999999988763


No 185
>d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]}
Probab=92.38  E-value=0.076  Score=48.98  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          579 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       579 ~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      ..+..++...++.+.++.  ...+|.+.|||+||.+|..++..
T Consensus       117 ~~~~~~i~~~i~~~~~~~--~~~~i~iTGHSLGGAlA~L~a~~  157 (271)
T d1tiaa_         117 KLVRDDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATD  157 (271)
T ss_pred             HHHHHHHHHHHHHHHHhC--CCceEEEeccchHHHHHHHHHHH
Confidence            344556666666665543  23589999999999999988764


No 186
>d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]}
Probab=92.28  E-value=0.098  Score=47.91  Aligned_cols=40  Identities=28%  Similarity=0.295  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          580 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      .+.+++...++.++++..  ..+|.+.|||+||.+|..++..
T Consensus       106 ~i~~~i~~~i~~~~~~~~--~~~i~vTGHSLGGAlA~L~a~~  145 (261)
T d1uwca_         106 SVQDQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQ  145 (261)
T ss_dssp             HHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCC--CcceEEeccchhHHHHHHHHHH
Confidence            445666677777666532  3589999999999999988754


No 187
>d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]}
Probab=92.27  E-value=0.098  Score=48.17  Aligned_cols=40  Identities=25%  Similarity=0.342  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          580 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      .+.+++...++.+.++..  .-+|.++|||+||.+|..++..
T Consensus       119 ~~~~~v~~~v~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~  158 (269)
T d1tiba_         119 SVADTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGAD  158 (269)
T ss_dssp             HHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCC--CcceeeeccchHHHHHHHHHHH
Confidence            445666666666655532  3589999999999999999864


No 188
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=91.88  E-value=3.6  Score=40.52  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=21.2

Q ss_pred             eEEEEEcC-CCCceecC---------CC-ceEEeeeeCCC---CceEEEE
Q 004475          157 AQLVLGSL-DGTAKDFG---------TP-AVYTAVEPSPD---QKYVLIT  192 (751)
Q Consensus       157 ~~l~~~~~-~G~~~~lt---------~~-~~~~~~~~SpD---G~~i~~~  192 (751)
                      ..|++++. +|+.+.+.         .. ....++++.||   ..+|+++
T Consensus        48 G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvs   97 (450)
T d1crua_          48 GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (450)
T ss_dssp             CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEE
Confidence            46777776 55433221         11 56678899886   4566654


No 189
>d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]}
Probab=91.84  E-value=0.12  Score=47.50  Aligned_cols=41  Identities=20%  Similarity=0.205  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 004475          579 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH  621 (751)
Q Consensus       579 ~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~  621 (751)
                      ..+..++...++.+.++.  ...+|.+.|||+||.+|..++..
T Consensus       112 ~~v~~~i~~~i~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~~  152 (265)
T d3tgla_         112 GEVQNELVATVLDQFKQY--PSYKVAVTGHSLGGATVLLCALD  152 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhC--CCceEEEecccchHHHHHHHHHH
Confidence            344555666665555543  23689999999999999988753


No 190
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=86.61  E-value=13  Score=34.67  Aligned_cols=79  Identities=5%  Similarity=-0.083  Sum_probs=41.4

Q ss_pred             CceeeeecCCCceEEEEEeccCCCCccc------cCcccceeeccCCCCCCCCceEeEeeceeEE-EEEecCCceEEEee
Q 004475          244 MRSISWRADKPSTLYWVEAQDRGDANVE------VSPRDIIYTQPAEPAEGEKPEILHKLDLRFS-VSWCDDSLALVNET  316 (751)
Q Consensus       244 ~~~~~~spdG~~~i~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~spdg~~l~~~~  316 (751)
                      ...+....||.  ++++...........      ....+.++.++.     +..+.+...-.... +++|||++.|+.+.
T Consensus       152 pNDv~~~~~g~--fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~-----~~~~~~~~~l~~pNGI~~s~d~~~lyVa~  224 (340)
T d1v04a_         152 VNDIVAVGPEH--FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVAEGFDFANGINISPDGKYVYIAE  224 (340)
T ss_dssp             EEEEEEEETTE--EEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS-----SCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             ccceEEecCCC--EEEecCccCcChhhhhhhHhhcCCceeEEEEcC-----CceEEEcCCCCccceeEECCCCCEEEEEe
Confidence            34778888886  667642211110000      011233444443     33444433323334 89999999888766


Q ss_pred             eecccceeEEEecCCC
Q 004475          317 WYKTSQTRTWLVCPGS  332 (751)
Q Consensus       317 ~~~~~~~~l~~~~~~~  332 (751)
                      .   ...+|++++++.
T Consensus       225 t---~~~~i~~y~~~~  237 (340)
T d1v04a_         225 L---LAHKIHVYEKHA  237 (340)
T ss_dssp             G---GGTEEEEEEECT
T ss_pred             C---CCCeEEEEEeCC
Confidence            3   334677776654


No 191
>d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]}
Probab=86.29  E-value=2  Score=36.66  Aligned_cols=55  Identities=11%  Similarity=0.119  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEccCC
Q 004475          579 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGS  635 (751)
Q Consensus       579 ~~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~  635 (751)
                      ...+.++...+....++  ....||+|+|+|+|+.++-.++..-    .+++++++++.-.
T Consensus        76 ~~G~~~~~~~i~~~a~~--CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP  134 (197)
T d1cexa_          76 SAAIREMLGLFQQANTK--CPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT  134 (197)
T ss_dssp             HHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred             hHHHHHHHHHHHHHHhh--CCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence            34566666777666655  2347999999999999998887653    2578888888854


No 192
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=85.73  E-value=15  Score=34.57  Aligned_cols=83  Identities=7%  Similarity=-0.077  Sum_probs=52.8

Q ss_pred             eeEEeecCCCCCCCCcccccCC--CCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            6 GIGIHRLLPDDSLGPEKEVHGY--PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         6 ~~~~~~~~~~~~~g~~~~l~~~--~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      .+.++|..+    ++-+++...  +........++.+||+.+++-.         .+...++++|+.+..-+.+...+..
T Consensus        53 ~~~~yd~~t----~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg---------~~~~~~~~yd~~~~~w~~~~~~~~~  119 (387)
T d1k3ia3          53 LTSSWDPST----GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---------NDAKKTSLYDSSSDSWIPGPDMQVA  119 (387)
T ss_dssp             EEEEECTTT----CCBCCCEEEECSCCCSSCEEEECTTSCEEEECS---------SSTTCEEEEEGGGTEEEECCCCSSC
T ss_pred             EEEEEECCC----CcEeecCCCCCCcccceeEEEEecCCcEEEeec---------CCCcceeEecCccCccccccccccc
Confidence            467899988    776654321  2222344568999997776621         3345788889998888777655432


Q ss_pred             cccceeeeeEEecCCcEEEEe
Q 004475           84 CLNAVFGSFVWVNNSTLLIFT  104 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~  104 (751)
                      .   .....+-.+||+.+++.
T Consensus       120 r---~~~~~~~~~dG~v~v~G  137 (387)
T d1k3ia3         120 R---GYQSSATMSDGRVFTIG  137 (387)
T ss_dssp             C---SSCEEEECTTSCEEEEC
T ss_pred             c---cccceeeecCCceeeec
Confidence            2   12345667899877776


No 193
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.82  E-value=14  Score=33.41  Aligned_cols=142  Identities=9%  Similarity=0.037  Sum_probs=71.5

Q ss_pred             EEEEEcC-CC-CceecCCCceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCc-eeeeeccCCCCCCCC
Q 004475          158 QLVLGSL-DG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIP  234 (751)
Q Consensus       158 ~l~~~~~-~G-~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~  234 (751)
                      .|-+.|+ +. +.+..+-...+..-.|-.+. .|++..              ...+|-|++++. ++..+.+....    
T Consensus        84 ~LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT--------------~taVYHW~~~g~s~P~k~fdR~~~----  144 (327)
T d1utca2          84 TLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT--------------DNAVYHWSMEGESQPVKMFDRHSS----  144 (327)
T ss_dssp             EEEEEETTTTEEEEEEECSSCCCEEEESSSS-EEEEEC--------------SSEEEEEESSSSCCCEEEEECCGG----
T ss_pred             eEEEEehhHhhhhceEEcCCCcEEEEecCCC-EEEEEc--------------CCceEEEcccCCCCchhhhhhccc----
Confidence            4555566 22 44555444556666787444 555553              335889998653 34444333211    


Q ss_pred             CccCCccCCCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCCCceEeEeeceeEEEEEecCC-----
Q 004475          235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDS-----  309 (751)
Q Consensus       235 ~~~~~~~~~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~spdg-----  309 (751)
                        +  ...++-.+.-++|++|+++..=+...+    .+  .+.+-++..+   .+..+.|..+.+.+. .+--+|     
T Consensus       145 --L--~~~QIInY~~d~~~kW~~l~GI~~~~~----~i--~G~mQLYS~e---r~~sQ~ieGhaa~F~-~~~~~g~~~~~  210 (327)
T d1utca2         145 --L--AGCQIINYRTDAKQKWLLLTGISAQQN----RV--VGAMQLYSVD---RKVSQPIEGHAASFA-QFKMEGNAEES  210 (327)
T ss_dssp             --G--TTCEEEEEEECTTSCEEEEEEEEEETT----EE--EEEEEEEETT---TTEEEEECCSEEEEE-EECCTTCSSCE
T ss_pred             --c--cCceEEEEEECCCCCEEEEEeEecCCC----ce--eEEEEEEEec---cCcCccccceeeeeE-EEEcCCCCCCc
Confidence              0  123344678899999955442211111    11  1444444443   223444444444333 443332     


Q ss_pred             ceEEEeeeecccceeEEEecCCCC
Q 004475          310 LALVNETWYKTSQTRTWLVCPGSK  333 (751)
Q Consensus       310 ~~l~~~~~~~~~~~~l~~~~~~~~  333 (751)
                      +.++|.. +......|.++++...
T Consensus       211 ~lf~fa~-r~~~~~kLhIiEig~~  233 (327)
T d1utca2         211 TLFCFAV-RGQAGGKLHIIEVGTP  233 (327)
T ss_dssp             EEEEEEE-EETTEEEEEEEECSCC
T ss_pred             eEEEEEE-CCCCCcEEEEEEcCCC
Confidence            2345554 3344578888888763


No 194
>d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]}
Probab=75.98  E-value=2.2  Score=36.75  Aligned_cols=54  Identities=17%  Similarity=0.144  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------------------CCceeEEEEccCC
Q 004475          580 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------------------PHLFCCGIARSGS  635 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~------------------p~~~~~~v~~~~~  635 (751)
                      ....++...++...++  ....||+|+|+|+|+.++..++...                  .+++++++++.-.
T Consensus        63 ~G~~~~~~~i~~~~~~--CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP  134 (207)
T d1qoza_          63 NGTNAAAAAINNFHNS--CPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP  134 (207)
T ss_dssp             HHHHHHHHHHHHHHHH--CTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred             HHHHHHHHHHHHHHHh--CCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCC
Confidence            4456666666666655  3346999999999999998886421                  1257888887644


No 195
>d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]}
Probab=74.67  E-value=3.5  Score=35.45  Aligned_cols=55  Identities=16%  Similarity=0.179  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------------------CCceeEEEEccCCC
Q 004475          580 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------------------PHLFCCGIARSGSY  636 (751)
Q Consensus       580 ~~~~d~~~~v~~l~~~~~id~~~i~l~G~S~GG~~a~~~a~~~------------------p~~~~~~v~~~~~~  636 (751)
                      ..+..+...|....++  ....||+|+|+|+|+.++-.++..-                  .+++++++++.-..
T Consensus        63 ~G~~~~~~~i~~~~~~--CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~  135 (207)
T d1g66a_          63 QGIAAVASAVNSFNSQ--CPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM  135 (207)
T ss_dssp             HHHHHHHHHHHHHHHH--STTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred             HHHHHHHHHHHHHHHh--CCCCcEEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence            4456666666666555  2236999999999999998776421                  13578888777553


No 196
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=69.02  E-value=40  Score=30.25  Aligned_cols=141  Identities=15%  Similarity=0.166  Sum_probs=85.4

Q ss_pred             ceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCe-eeccCCCCc
Q 004475            5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDI   83 (751)
Q Consensus         5 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~-~~lt~~~~~   83 (751)
                      +++.+.|+..    +...  +.-|.  ...++-.+|.-+-||--           .+..|-+.++++.+. +..+- .+ 
T Consensus        45 ~~VvIidl~n----~~~~--~Rrpi--~AdsAIMhP~~~IiALr-----------ag~~LQiFnletK~klks~~~-~e-  103 (327)
T d1utca2          45 AQVVIIDMND----PSNP--IRRPI--SADSAIMNPASKVIALK-----------AGKTLQIFNIEMKSKMKAHTM-TD-  103 (327)
T ss_dssp             EEEEEEETTS----TTSC--EEEEC--CCSEEEECSSSSEEEEE-----------ETTEEEEEETTTTEEEEEEEC-SS-
T ss_pred             ceEEEEECCC----CCcc--eeccc--chhhhhcCCCCcEEEEe-----------cCCeEEEEehhHhhhhceEEc-CC-
Confidence            4677788865    3321  10111  24567788988888872           245677888877542 22221 22 


Q ss_pred             cccceeeeeEEecCCcEEEEeecCCCCCCCCCCCCCCCCceeeccccccccchhhhhccCCccchhhhhhheeeEEEEEc
Q 004475           84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS  163 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  163 (751)
                          .+.-..|-.+. .|++.+.                                                  ..+|-|+
T Consensus       104 ----~VvfWkWis~~-~L~lVT~--------------------------------------------------taVYHW~  128 (327)
T d1utca2         104 ----DVTFWKWISLN-TVALVTD--------------------------------------------------NAVYHWS  128 (327)
T ss_dssp             ----CCCEEEESSSS-EEEEECS--------------------------------------------------SEEEEEE
T ss_pred             ----CcEEEEecCCC-EEEEEcC--------------------------------------------------CceEEEc
Confidence                13445776554 5776632                                                  5788888


Q ss_pred             CCC--CceecCCC------ceEEeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccC
Q 004475          164 LDG--TAKDFGTP------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL  227 (751)
Q Consensus       164 ~~G--~~~~lt~~------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~  227 (751)
                      ++|  +++++.+.      ..+.++.-++|+|++++..-...      ..+....+.+|..+.+..+.|..+
T Consensus       129 ~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~------~~~i~G~mQLYS~er~~sQ~ieGh  194 (327)
T d1utca2         129 MEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ------QNRVVGAMQLYSVDRKVSQPIEGH  194 (327)
T ss_dssp             SSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEE------TTEEEEEEEEEETTTTEEEEECCS
T ss_pred             ccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecC------CCceeEEEEEEEeccCcCccccce
Confidence            866  45444321      56779999999999998765432      112246788888887766666433


No 197
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]}
Probab=64.73  E-value=4.4  Score=37.54  Aligned_cols=31  Identities=16%  Similarity=0.058  Sum_probs=22.5

Q ss_pred             CceEEEEEEcCCCCCCCCCCCccEEEEEcCCC
Q 004475          491 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPED  522 (751)
Q Consensus       491 ~~~i~~~~~~P~~~~~~~~~~~P~vv~~HGg~  522 (751)
                      +..-.+++|.|.....+. .++|++|.+||+.
T Consensus       201 ~~~~~gy~YvP~~~~~~~-~~~~l~v~~Hgc~  231 (318)
T d2d81a1         201 GMDTTGYLYVPQSCASGA-TVCSLHVALHGCL  231 (318)
T ss_dssp             TBCSEEEEEECHHHHSSS-SCEEEEEEECCTT
T ss_pred             CCccceEEEeCcccccCC-CCCceEEEEecCC
Confidence            445678999997654332 2489999999974


No 198
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=56.77  E-value=74  Score=29.19  Aligned_cols=149  Identities=11%  Similarity=0.069  Sum_probs=69.3

Q ss_pred             eEEEEEcCCCCc-eecCCC--ceE---EeeeeCCCCceEEEEEecCCcccccccCCCceeEEEEeCCCceeeeeccCCCC
Q 004475          157 AQLVLGSLDGTA-KDFGTP--AVY---TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA  230 (751)
Q Consensus       157 ~~l~~~~~~G~~-~~lt~~--~~~---~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~  230 (751)
                      .-|++++++|+. +.+..+  ..+   ..+...-++..|++.++....       ...-.+|.++........+......
T Consensus        50 ~Gl~vYdL~G~~l~~~~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~-------~~~l~~~~id~~~~~l~~~~~~~~p  122 (353)
T d1h6la_          50 SGLAVYSLEGKMLHSYHTGKLNNVDIRYDFPLNGKKVDIAAASNRSEG-------KNTIEIYAIDGKNGTLQSITDPNRP  122 (353)
T ss_dssp             SCCEEEETTCCEEEECCSSCEEEEEEEEEEEETTEEEEEEEEEECCTT-------TCEEEEEEEETTTTEEEECSCSSSC
T ss_pred             CCEEEEcCCCcEEEecccCCcCccccccccccCCcceEEEEEeCCcCc-------ceeEEEEEecCcccccccccccccc
Confidence            358999999944 444322  111   133444334445665543210       1112355555555555544322111


Q ss_pred             CCCCCccCCccCCCceeee--ecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCC-CceEeE--eeceeEE-EE
Q 004475          231 EDIPVCYNSVREGMRSISW--RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEILH--KLDLRFS-VS  304 (751)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~--spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~--~~~~~~~-~~  304 (751)
                            .......+.+++.  +|....+.+++....         .+...|.+... .++. ..+.+.  ....... ..
T Consensus       123 ------~~~~~~~vYGlc~y~~~~~g~~~afv~~k~---------G~v~q~~l~~~-~~g~v~~~lvr~f~~~~q~EGCV  186 (353)
T d1h6la_         123 ------IASAIDEVYGFSLYHSQKTGKYYAMVTGKE---------GEFEQYELNAD-KNGYISGKKVRAFKMNSQTEGMA  186 (353)
T ss_dssp             ------EECSSSSCCCEEEEECTTTCCEEEEEECSS---------SEEEEEEEEEC-TTSSEEEEEEEEEECSSCEEEEE
T ss_pred             ------cccccCcceEEEEEecCCCCeEEEEEEcCC---------ceEEEEEEEcC-CCCceeeEeeeccCCCCccceEE
Confidence                  0111123456666  666554355654221         12234444332 1111 112222  2233455 78


Q ss_pred             EecCCceEEEeeeecccceeEEEecCCC
Q 004475          305 WCDDSLALVNETWYKTSQTRTWLVCPGS  332 (751)
Q Consensus       305 ~spdg~~l~~~~~~~~~~~~l~~~~~~~  332 (751)
                      +.++.+.|+++.+.    ..+|+++++-
T Consensus       187 vDde~~~LyisEE~----~Giw~~~a~~  210 (353)
T d1h6la_         187 ADDEYGSLYIAEED----EAIWKFSAEP  210 (353)
T ss_dssp             EETTTTEEEEEETT----TEEEEEESST
T ss_pred             EeCCCCcEEEecCc----cceEEEEecc
Confidence            88888888887632    3578887653


No 199
>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.31  E-value=7.9  Score=37.87  Aligned_cols=63  Identities=22%  Similarity=0.286  Sum_probs=46.6

Q ss_pred             CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCC-------------------------CcEEEEEeCCCCCcCCccccHH
Q 004475          672 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-------------------------ALSRLVLLPFEHHVYAARENVM  726 (751)
Q Consensus       672 ~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~-------------------------~~~~~~~~~~~~H~~~~~~~~~  726 (751)
                      +.+|||.+|..|..||  ...++...+.|.-.+                         ....+.++-++||... ...+.
T Consensus       361 ~~rVliy~Gd~D~~~~--~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP-~dqP~  437 (452)
T d1ivya_         361 KYQILLYNGDVDMACN--FMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVP-TDKPL  437 (452)
T ss_dssp             CCEEEEEEETTCSSSC--HHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHH-HHCHH
T ss_pred             CCEEEEEeCCcceeCC--CHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEECCccccCc-ccCHH
Confidence            5789999999999998  888888887774211                         1345678889999864 34566


Q ss_pred             HHHHHHHHHHH
Q 004475          727 HVIWETDRWLQ  737 (751)
Q Consensus       727 ~~~~~~~~fl~  737 (751)
                      ..+..+.+||.
T Consensus       438 ~a~~m~~~fi~  448 (452)
T d1ivya_         438 AAFTMFSRFLN  448 (452)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHc
Confidence            67777777774


No 200
>d1pexa_ b.66.1.1 (A:) Collagenase-3 (MMP-13), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.87  E-value=64  Score=26.52  Aligned_cols=86  Identities=14%  Similarity=0.163  Sum_probs=42.1

Q ss_pred             EEeecCCCCCCCCcccccC-CCCcccccceee-cCCCCeEEEEEeecccccccCCceeEEEEEcCC---CCeeeccCCC-
Q 004475            8 GIHRLLPDDSLGPEKEVHG-YPDGAKINFVSW-SPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAKPLFESP-   81 (751)
Q Consensus         8 ~~~~~~~~~~~g~~~~l~~-~~~~~~~~~p~~-SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~---g~~~~lt~~~-   81 (751)
                      +.|.+.++...+..+.|.. -++......+++ .+++..+.|.+.           .+.|+.+-.+   |-++.|.... 
T Consensus        28 ~~wr~~~~~~~~~p~~i~~~w~~lp~~IDAAf~~~~~~~~yffkg-----------~~~w~y~~~~~~~gyPk~i~~~~~   96 (192)
T d1pexa_          28 FFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRG-----------RKFWALNGYDILEGYPKKISELGL   96 (192)
T ss_dssp             EEEEECSSSSCCEEEEHHHHCTTSCSSCCEEEEETTTTEEEEEET-----------TEEEEESTTCCCTTCSEESTTTTC
T ss_pred             EEEEEcCCCCCCcccchhhhCcCCCCcccceEEEcCCCEEEEEcC-----------CEEEEEcCCcccCCCCeEeeeeec
Confidence            3455555333344444442 122222234455 478888877542           5778876432   3356665421 


Q ss_pred             CccccceeeeeEEecCCcEEEEe
Q 004475           82 DICLNAVFGSFVWVNNSTLLIFT  104 (751)
Q Consensus        82 ~~~~~~~~~~~~wspDg~~l~~~  104 (751)
                      .......-..+.|+.+|+..+|.
T Consensus        97 ~~~~~~idaA~~~~~~~~~y~Fk  119 (192)
T d1pexa_          97 PKEVKKISAAVHFEDTGKTLLFS  119 (192)
T ss_dssp             CTTCCCCCEEEECTTTSEEEEEE
T ss_pred             CCCCCCccEEEEECCCCEEEEEe
Confidence            11111111245667778866665


No 201
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.53  E-value=82  Score=27.25  Aligned_cols=91  Identities=8%  Similarity=-0.125  Sum_probs=50.1

Q ss_pred             cceeEEeecCCCCCCCCcccccCCCCcccccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCCeeeccCCCCc
Q 004475            4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI   83 (751)
Q Consensus         4 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~~~~lt~~~~~   83 (751)
                      ...+.++|+.+    ++=++++.+|... .......-+++.++| ..............++|+.|..+...+.+...+..
T Consensus        18 ~~~~~~yd~~t----~~W~~~~~~p~~R-~~~~~~~~~~~iyv~-GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~   91 (288)
T d1zgka1          18 LSYLEAYNPSN----GTWLRLADLQVPR-SGLAGCVVGGLLYAV-GGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP   91 (288)
T ss_dssp             CCCEEEEETTT----TEEEECCCCSSCC-BSCEEEEETTEEEEE-CCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC
T ss_pred             CceEEEEECCC----CeEEECCCCCCcc-ceeEEEEECCEEEEE-eCcccCCCCccccchhhhcccccccccccccccce
Confidence            45788999988    8888888777643 233333445544444 22110001112346899999988888877654432


Q ss_pred             cccceeeeeEEecCCcEEEEe
Q 004475           84 CLNAVFGSFVWVNNSTLLIFT  104 (751)
Q Consensus        84 ~~~~~~~~~~wspDg~~l~~~  104 (751)
                      ..    ..-+..-+++.+++.
T Consensus        92 r~----~~~~~~~~~~i~~~g  108 (288)
T d1zgka1          92 RN----RIGVGVIDGHIYAVG  108 (288)
T ss_dssp             CB----TCEEEEETTEEEEEC
T ss_pred             ec----ceeccccceeeEEec
Confidence            11    111223477655554


No 202
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=40.55  E-value=92  Score=25.59  Aligned_cols=56  Identities=20%  Similarity=0.233  Sum_probs=32.7

Q ss_pred             cccceeecCCCCeEEEEEeecccccccCCceeEEEEEcCCCC-------eeeccCCCCccccceeeeeEEecCCcEEEEe
Q 004475           32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNNSTLLIFT  104 (751)
Q Consensus        32 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~~~~~l~i~~~~~g~-------~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~  104 (751)
                      .+....+||+|+..|...            .+||.=++.+..       .++|   ....++ .+.-+.+.|.|= |+..
T Consensus        41 n~~~i~fsP~G~LyaVr~------------~~lY~Gp~~s~~nq~wf~~atrI---G~ggWn-~FkflffdP~G~-LyaV  103 (235)
T d1tl2a_          41 NFKFLFLSPGGELYGVLN------------DKIYKGTPPTHDNDNWMGRAKKI---GNGGWN-QFQFLFFDPNGY-LYAV  103 (235)
T ss_dssp             TCSEEEECTTSCEEEEET------------TEEEEESCCCSTTCCHHHHCEEE---ECSCGG-GCSEEEECTTSC-EEEE
T ss_pred             ceeEEEECCCCcEEEEEC------------CeEEECCCCCcchHHHHHhhhhc---ccCccc-ceEEEEECCCce-EEEe
Confidence            456799999997766631            488877765533       2333   221222 144567778883 4433


No 203
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=39.30  E-value=97  Score=25.46  Aligned_cols=99  Identities=6%  Similarity=0.042  Sum_probs=50.1

Q ss_pred             CCceeeeecCCCceEEEEEeccCCCCccccCcccceeeccCCCCCCC----CceEeEeeceeE-E-EEEecCCceEEEee
Q 004475          243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE----KPEILHKLDLRF-S-VSWCDDSLALVNET  316 (751)
Q Consensus       243 ~~~~~~~spdG~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~l~~~~~~~-~-~~~spdg~~l~~~~  316 (751)
                      +++-+.|||+|+. .++..              ++||.=.....+..    ..+.|-...+.. . ..|.|.|-.-+. +
T Consensus        41 n~~~i~fsP~G~L-yaVr~--------------~~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G~LyaV-t  104 (235)
T d1tl2a_          41 NFKFLFLSPGGEL-YGVLN--------------DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S  104 (235)
T ss_dssp             TCSEEEECTTSCE-EEEET--------------TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E
T ss_pred             ceeEEEECCCCcE-EEEEC--------------CeEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCceEEEe-c
Confidence            3557899999984 33322              36666544211111    123444433332 3 678888863332 2


Q ss_pred             eecccceeEEEecCCCCCCc-----ceeeeecccccccCCCCCCCeeeCCCCCEEEE
Q 004475          317 WYKTSQTRTWLVCPGSKDVA-----PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA  368 (751)
Q Consensus       317 ~~~~~~~~l~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~spDG~~l~~  368 (751)
                         +  .+||.-...+.+..     ...+-...-.++..      +.|.|+|..-++
T Consensus       105 ---~--~~LYr~~pPtn~~q~W~g~a~~vG~~gw~df~~------lFFdP~G~LYaV  150 (235)
T d1tl2a_         105 ---K--DKLYKASPPQSDTDNWIARATEVGSGGWSGFKF------LFFHPNGYLYAV  150 (235)
T ss_dssp             ---T--TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEE------EEECTTSCEEEE
T ss_pred             ---C--cceecCCcCcccchhhhhhhhhhccCCcCceeE------EEECCCceEEEE
Confidence               1  37998887664221     11222222222221      668999964444


No 204
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.12  E-value=1.3e+02  Score=25.74  Aligned_cols=24  Identities=8%  Similarity=-0.121  Sum_probs=18.4

Q ss_pred             CCceeEEEEEcCCCCeeeccCCCC
Q 004475           59 SCKLRVWIADAETGEAKPLFESPD   82 (751)
Q Consensus        59 ~~~~~l~i~~~~~g~~~~lt~~~~   82 (751)
                      .....+++.|+++++-++++..+.
T Consensus        16 ~~~~~~~~yd~~t~~W~~~~~~p~   39 (288)
T d1zgka1          16 QSLSYLEAYNPSNGTWLRLADLQV   39 (288)
T ss_dssp             SBCCCEEEEETTTTEEEECCCCSS
T ss_pred             CCCceEEEEECCCCeEEECCCCCC
Confidence            344688899999998888876554


No 205
>d1sgva1 b.122.1.1 (A:236-292) Pseudouridine synthase II TruB, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.70  E-value=48  Score=21.06  Aligned_cols=18  Identities=22%  Similarity=0.287  Sum_probs=15.1

Q ss_pred             ccceeecCCCCeEEEEEe
Q 004475           33 INFVSWSPDGKRIAFSVR   50 (751)
Q Consensus        33 ~~~p~~SPDG~~iaf~~~   50 (751)
                      -...+++|||+-||-+.+
T Consensus        27 G~~Aa~~PdG~~iALl~~   44 (57)
T d1sgva1          27 GVYAACDADGRVIALLRD   44 (57)
T ss_dssp             SCEEEECTTSCEEEEEEE
T ss_pred             CCEEEECCCCCEEEEEEc
Confidence            357899999999999864


No 206
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=25.45  E-value=2.3e+02  Score=25.58  Aligned_cols=18  Identities=11%  Similarity=-0.042  Sum_probs=12.7

Q ss_pred             ceeEEEEEcCCCCeeecc
Q 004475           61 KLRVWIADAETGEAKPLF   78 (751)
Q Consensus        61 ~~~l~i~~~~~g~~~~lt   78 (751)
                      ..-|++++++|.+...+.
T Consensus        49 ~~Gl~vYdL~G~~l~~~~   66 (353)
T d1h6la_          49 KSGLAVYSLEGKMLHSYH   66 (353)
T ss_dssp             TSCCEEEETTCCEEEECC
T ss_pred             cCCEEEEcCCCcEEEecc
Confidence            345999999766666653


No 207
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.55  E-value=55  Score=27.60  Aligned_cols=46  Identities=15%  Similarity=0.283  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCcc
Q 004475          672 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR  722 (751)
Q Consensus       672 ~~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~  722 (751)
                      ..|++++||-.+...-     -..+.+.|.+....+++..++--||+.+..
T Consensus         2 ~~PvvllHG~~~~~~~-----~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~   47 (268)
T d1pjaa_           2 YKPVIVVHGLFDSSYS-----FRHLLEYINETHPGTVVTVLDLFDGRESLR   47 (268)
T ss_dssp             CCCEEEECCTTCCGGG-----GHHHHHHHHHHSTTCCEEECCSSCSGGGGS
T ss_pred             CCCEEEECCCCCCHHH-----HHHHHHHHHhhCCCeEEEEeCCCCCCCCCC
Confidence            3699999999876532     234555565543345566677677887643


No 208
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=23.76  E-value=1.7e+02  Score=27.14  Aligned_cols=50  Identities=22%  Similarity=0.220  Sum_probs=31.8

Q ss_pred             HHHHH-HHHHHcC----CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475          585 AEAAV-EEVVRRG----VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY  636 (751)
Q Consensus       585 ~~~~v-~~l~~~~----~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~  636 (751)
                      +++++ +|+.++.    .++++.|++...+.++...+..+...|.  ..+++..|.+
T Consensus        88 LR~aiA~~l~~~~~~~~~~~~e~Ivit~G~~~al~~~~~~l~~~G--d~Vlv~~P~y  142 (428)
T d1iaya_          88 FRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPG--DAFLVPSPYY  142 (428)
T ss_dssp             HHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTT--CEEEEESSCC
T ss_pred             HHHHHHHHHHHHhCCCCCCChhhEEEcCCHHHHHHHHHHHhCCCC--CEEEEccCCc
Confidence            33444 6666542    3678899999888888776666665554  3455566654


No 209
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=23.08  E-value=3.2e+02  Score=26.42  Aligned_cols=57  Identities=11%  Similarity=0.063  Sum_probs=32.6

Q ss_pred             ceeEEEecCCCceeEEeeccchhhhhceeeeecCCcceeeccCCCEEEEEEecC-------------CCCCeEEEEEcCC
Q 004475          394 PFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-------------TEITQYHILSWPL  460 (751)
Q Consensus       394 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------------~~~~~l~~~~~~~  460 (751)
                      ..|+.+|.++|+.  ||.-+..      ...  ....+.+..||+..+......             .....|+...|++
T Consensus       498 g~l~A~Da~TGe~--LW~~~~~------~~~--~~~P~ty~~~GkQYv~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g  567 (573)
T d1kb0a2         498 GRLVAYHAATGEK--LWEAPTG------TGV--VAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG  567 (573)
T ss_dssp             SEEEEEETTTCCE--EEEEECS------SCC--CSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred             CeEEEEECCCCcE--eEEEECC------CCc--cccCEEEEECCEEEEEEEeCCCcccccccccccCCCCCEEEEEEeCC
Confidence            3799999999975  5654321      000  112245667898766555442             2234577777654


No 210
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Probab=21.99  E-value=62  Score=26.00  Aligned_cols=37  Identities=14%  Similarity=0.141  Sum_probs=24.6

Q ss_pred             CCEEEEEcCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 004475          673 KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF  714 (751)
Q Consensus       673 ~P~li~~G~~D~~vp~~~~~~~~~~~~l~~~~~~~~~~~~~~  714 (751)
                      .|++++||-.+..-     .-..+.+.|.+.+..+.....++
T Consensus         3 ~PVv~vHG~~~~~~-----~~~~l~~~l~~~g~~~~~~~~~~   39 (179)
T d1ispa_           3 NPVVMVHGIGGASF-----NFAGIKSYLVSQGWSRDKLYAVD   39 (179)
T ss_dssp             CCEEEECCTTCCGG-----GGHHHHHHHHHTTCCGGGEEECC
T ss_pred             CCEEEECCCCCCHH-----HHHHHHHHHHHcCCeEEEEecCC
Confidence            69999999987643     33456777887776544444444


No 211
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Probab=21.69  E-value=2.9e+02  Score=25.42  Aligned_cols=45  Identities=13%  Similarity=0.075  Sum_probs=29.7

Q ss_pred             HHHHHc----CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEccCCC
Q 004475          590 EEVVRR----GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY  636 (751)
Q Consensus       590 ~~l~~~----~~id~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~  636 (751)
                      +|+.+.    -.+|++.|++...|..|...+..+...|.  ..+++..|.+
T Consensus        95 ~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pG--d~Vlv~~P~y  143 (431)
T d1m7ya_          95 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPG--EAVLIPTPYY  143 (431)
T ss_dssp             HHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTT--CEEEEEESCC
T ss_pred             HHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCC--CEEEEeCCCc
Confidence            555543    23688899998878877777766666554  3455566654


Done!