Query 004479
Match_columns 750
No_of_seqs 432 out of 2962
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 00:05:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004479.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004479hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2217 ZntA Cation transport 100.0 3E-127 6E-132 1095.7 65.9 593 106-750 89-690 (713)
2 KOG0207 Cation transport ATPas 100.0 3E-120 6E-125 1013.8 46.4 663 19-743 171-869 (951)
3 PRK11033 zntA zinc/cadmium/mer 100.0 4E-104 1E-108 931.0 68.5 557 141-750 161-719 (741)
4 PRK10671 copA copper exporting 100.0 3.9E-99 8E-104 906.1 71.4 561 139-749 223-809 (834)
5 TIGR01511 ATPase-IB1_Cu copper 100.0 3.4E-99 7E-104 867.2 64.1 538 149-749 1-562 (562)
6 TIGR01647 ATPase-IIIA_H plasma 100.0 6.8E-98 1E-102 881.4 60.2 530 169-737 39-612 (755)
7 PRK10517 magnesium-transportin 100.0 2.5E-94 5.4E-99 860.6 60.9 537 169-739 106-717 (902)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.1E-93 2.3E-98 855.9 61.9 528 169-738 72-681 (867)
9 PRK14010 potassium-transportin 100.0 8.7E-94 1.9E-98 820.0 58.5 491 193-733 74-577 (673)
10 PRK01122 potassium-transportin 100.0 3.1E-93 6.6E-98 816.2 61.1 507 189-742 70-593 (679)
11 PRK15122 magnesium-transportin 100.0 8.7E-93 1.9E-97 848.7 61.5 533 170-737 85-715 (903)
12 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.9E-91 6.3E-96 844.6 64.3 553 169-742 99-752 (941)
13 TIGR01512 ATPase-IB2_Cd heavy 100.0 4.2E-91 9.1E-96 797.7 57.2 514 168-749 1-516 (536)
14 TIGR01525 ATPase-IB_hvy heavy 100.0 4.1E-90 8.9E-95 794.3 60.7 533 168-749 1-538 (556)
15 KOG0202 Ca2+ transporting ATPa 100.0 1.4E-91 3E-96 773.1 43.4 566 169-748 62-771 (972)
16 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6.5E-90 1.4E-94 828.1 59.4 548 169-738 64-697 (884)
17 KOG0204 Calcium transporting A 100.0 3.8E-92 8.3E-97 776.2 33.9 616 87-742 92-822 (1034)
18 TIGR01497 kdpB K+-transporting 100.0 5.7E-89 1.2E-93 779.2 58.5 505 191-741 73-593 (675)
19 COG0474 MgtA Cation transport 100.0 4.9E-88 1.1E-92 808.9 47.5 543 169-738 83-718 (917)
20 TIGR01523 ATPase-IID_K-Na pota 100.0 1.7E-85 3.7E-90 794.1 62.6 549 169-741 65-828 (1053)
21 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8.9E-85 1.9E-89 790.1 60.8 536 183-739 102-764 (997)
22 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.7E-84 5.9E-89 781.0 59.2 554 169-740 10-711 (917)
23 TIGR01657 P-ATPase-V P-type AT 100.0 1.8E-81 3.8E-86 766.1 55.4 538 172-738 180-878 (1054)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.9E-81 4.1E-86 715.7 51.5 478 193-743 4-485 (499)
25 TIGR01652 ATPase-Plipid phosph 100.0 1.4E-68 3E-73 654.7 47.1 525 189-739 58-848 (1057)
26 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.4E-70 3.1E-75 604.9 21.6 526 192-739 133-786 (1019)
27 COG2216 KdpB High-affinity K+ 100.0 5.5E-68 1.2E-72 557.1 35.3 477 195-718 76-568 (681)
28 KOG0208 Cation transport ATPas 100.0 2.3E-67 4.9E-72 587.9 40.1 548 163-737 191-928 (1140)
29 KOG0205 Plasma membrane H+-tra 100.0 3.5E-67 7.6E-72 561.8 29.0 505 184-731 96-656 (942)
30 PLN03190 aminophospholipid tra 100.0 2.4E-63 5.2E-68 602.8 51.3 535 188-749 143-962 (1178)
31 KOG0209 P-type ATPase [Inorgan 100.0 1.4E-54 3.1E-59 475.0 24.9 478 179-685 210-833 (1160)
32 KOG0210 P-type ATPase [Inorgan 100.0 2.2E-51 4.8E-56 442.4 28.2 505 184-724 131-846 (1051)
33 KOG0206 P-type ATPase [General 100.0 2.7E-48 5.9E-53 456.1 31.0 532 190-747 89-883 (1151)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 4.2E-35 9.1E-40 301.4 24.4 220 191-426 2-230 (230)
35 PF00702 Hydrolase: haloacid d 100.0 3.8E-30 8.2E-35 261.1 12.1 209 430-678 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.7 3.1E-16 6.7E-21 138.3 10.2 112 585-699 21-136 (152)
37 TIGR02137 HSK-PSP phosphoserin 99.1 1.6E-10 3.4E-15 116.0 10.2 116 594-714 68-198 (203)
38 PRK11133 serB phosphoserine ph 99.0 9.9E-10 2.2E-14 117.7 11.7 116 594-712 181-316 (322)
39 TIGR00338 serB phosphoserine p 99.0 1.4E-09 3.1E-14 110.8 9.4 114 594-710 85-218 (219)
40 TIGR01670 YrbI-phosphatas 3-de 98.9 2.4E-08 5.3E-13 95.8 12.9 109 585-703 25-136 (154)
41 COG0560 SerB Phosphoserine pho 98.8 2.8E-08 6E-13 100.3 9.8 104 593-699 76-199 (212)
42 TIGR02726 phenyl_P_delta pheny 98.7 6.3E-08 1.4E-12 94.0 11.2 101 601-705 41-144 (169)
43 PRK13582 thrH phosphoserine ph 98.7 6.6E-08 1.4E-12 97.4 10.2 112 594-711 68-195 (205)
44 PRK09484 3-deoxy-D-manno-octul 98.7 9.7E-08 2.1E-12 94.5 9.8 96 601-700 55-153 (183)
45 TIGR01487 SPP-like sucrose-pho 98.6 1.8E-07 3.9E-12 95.1 11.3 115 594-710 18-214 (215)
46 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 2.1E-07 4.6E-12 93.2 10.5 101 594-696 80-200 (201)
47 PRK01158 phosphoglycolate phos 98.6 2.9E-07 6.3E-12 94.5 11.8 116 595-712 21-226 (230)
48 COG0561 Cof Predicted hydrolas 98.5 5.5E-07 1.2E-11 94.6 11.9 117 595-713 21-259 (264)
49 PRK10513 sugar phosphate phosp 98.5 9.1E-07 2E-11 93.2 12.5 53 659-712 213-265 (270)
50 PLN02954 phosphoserine phospha 98.5 8.4E-07 1.8E-11 90.7 11.2 113 594-709 84-221 (224)
51 KOG1615 Phosphoserine phosphat 98.5 1.9E-07 4.1E-12 89.0 5.8 91 594-685 88-200 (227)
52 PRK15126 thiamin pyrimidine py 98.5 6E-07 1.3E-11 94.8 10.3 53 659-712 205-259 (272)
53 TIGR01482 SPP-subfamily Sucros 98.5 1.3E-06 2.8E-11 89.3 11.9 116 594-711 15-221 (225)
54 PRK10976 putative hydrolase; P 98.4 1.2E-06 2.7E-11 92.0 11.1 53 659-712 207-261 (266)
55 PF12710 HAD: haloacid dehalog 98.4 8.1E-07 1.8E-11 88.2 8.0 77 597-675 92-192 (192)
56 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.4 2.1E-06 4.5E-11 86.2 10.2 93 592-685 85-198 (202)
57 PRK10530 pyridoxal phosphate ( 98.3 4.6E-06 9.9E-11 87.9 13.2 53 659-712 216-268 (272)
58 TIGR03333 salvage_mtnX 2-hydro 98.3 2E-06 4.2E-11 87.5 9.4 90 593-684 69-182 (214)
59 TIGR01488 HAD-SF-IB Haloacid D 98.3 1.5E-06 3.4E-11 85.1 8.1 83 594-677 73-177 (177)
60 PF08282 Hydrolase_3: haloacid 98.3 5.7E-06 1.2E-10 85.4 12.3 116 593-710 14-253 (254)
61 TIGR00099 Cof-subfamily Cof su 98.3 3.5E-06 7.6E-11 88.0 10.6 51 659-710 205-255 (256)
62 COG1778 Low specificity phosph 98.2 3.6E-06 7.9E-11 77.9 7.1 113 601-717 42-161 (170)
63 PLN02887 hydrolase family prot 98.2 9.9E-06 2.1E-10 93.2 11.9 52 660-712 525-576 (580)
64 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 6.6E-06 1.4E-10 81.3 8.3 89 593-682 71-186 (188)
65 PRK13222 phosphoglycolate phos 98.1 1E-05 2.2E-10 82.7 9.6 118 593-714 92-224 (226)
66 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.1E-05 2.4E-10 82.2 8.3 86 594-682 74-184 (219)
67 COG0546 Gph Predicted phosphat 98.0 2.9E-05 6.2E-10 79.3 9.5 116 592-711 87-217 (220)
68 PRK08238 hypothetical protein; 97.9 9.6E-05 2.1E-09 83.6 12.4 89 594-685 72-166 (479)
69 cd01427 HAD_like Haloacid deha 97.8 6.7E-05 1.5E-09 69.1 8.8 91 590-682 20-138 (139)
70 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.00011 2.3E-09 74.1 9.4 114 594-710 75-202 (205)
71 TIGR01486 HAD-SF-IIB-MPGP mann 97.7 0.00019 4.1E-09 75.0 10.8 53 659-712 195-253 (256)
72 PRK13288 pyrophosphatase PpaX; 97.7 0.00018 3.8E-09 73.0 9.1 115 594-711 82-210 (214)
73 PRK03669 mannosyl-3-phosphogly 97.6 0.00027 5.8E-09 74.5 10.3 40 595-635 25-64 (271)
74 PRK13223 phosphoglycolate phos 97.6 0.0002 4.3E-09 75.5 9.1 117 593-712 100-230 (272)
75 PRK00192 mannosyl-3-phosphogly 97.5 0.00028 6.1E-09 74.5 8.1 107 604-712 142-267 (273)
76 PRK10826 2-deoxyglucose-6-phos 97.5 0.00029 6.3E-09 71.9 7.9 113 593-708 91-216 (222)
77 TIGR01449 PGP_bact 2-phosphogl 97.4 0.00048 1E-08 69.6 7.9 112 594-708 85-210 (213)
78 PRK10187 trehalose-6-phosphate 97.3 0.0011 2.3E-08 69.7 9.4 112 594-712 36-241 (266)
79 PRK13225 phosphoglycolate phos 97.2 0.002 4.4E-08 67.9 10.3 114 594-711 142-267 (273)
80 TIGR01545 YfhB_g-proteo haloac 97.2 0.0027 5.8E-08 64.2 10.7 91 594-685 94-202 (210)
81 TIGR01544 HAD-SF-IE haloacid d 97.2 0.0047 1E-07 64.5 12.5 119 593-712 120-274 (277)
82 PRK11590 hypothetical protein; 97.1 0.0034 7.4E-08 63.5 11.1 91 594-685 95-203 (211)
83 TIGR02471 sucr_syn_bact_C sucr 97.0 0.0014 3E-08 67.6 6.7 67 645-712 159-232 (236)
84 PRK13226 phosphoglycolate phos 97.0 0.0029 6.2E-08 65.0 8.9 113 594-710 95-223 (229)
85 KOG4383 Uncharacterized conser 96.9 0.0042 9E-08 69.7 10.0 161 586-748 818-1116(1354)
86 TIGR01485 SPP_plant-cyano sucr 96.9 0.004 8.7E-08 64.7 9.6 101 593-695 20-220 (249)
87 PRK13478 phosphonoacetaldehyde 96.8 0.0046 9.9E-08 65.0 9.3 115 594-712 101-255 (267)
88 TIGR01548 HAD-SF-IA-hyp1 haloa 96.8 0.0033 7.1E-08 62.8 7.7 84 592-677 104-197 (197)
89 TIGR02461 osmo_MPG_phos mannos 96.8 0.0069 1.5E-07 62.0 9.8 42 592-634 13-54 (225)
90 TIGR01422 phosphonatase phosph 96.7 0.0067 1.4E-07 63.2 9.3 84 594-680 99-196 (253)
91 TIGR01662 HAD-SF-IIIA HAD-supe 96.7 0.0084 1.8E-07 55.6 9.0 86 593-679 24-125 (132)
92 PRK12702 mannosyl-3-phosphogly 96.7 0.011 2.4E-07 61.8 10.3 42 593-635 17-58 (302)
93 PLN03243 haloacid dehalogenase 96.6 0.0084 1.8E-07 62.7 9.4 110 594-708 109-231 (260)
94 PLN02770 haloacid dehalogenase 96.6 0.0093 2E-07 62.0 9.5 109 594-706 108-230 (248)
95 TIGR03351 PhnX-like phosphonat 96.6 0.0071 1.5E-07 61.4 8.5 113 593-710 86-218 (220)
96 PRK06698 bifunctional 5'-methy 96.6 0.0071 1.5E-07 68.8 8.8 117 594-713 330-455 (459)
97 PRK11009 aphA acid phosphatase 96.5 0.0068 1.5E-07 62.2 7.7 82 593-680 113-206 (237)
98 PLN02382 probable sucrose-phos 96.5 0.016 3.6E-07 64.7 11.1 72 640-712 168-257 (413)
99 TIGR01672 AphA HAD superfamily 96.4 0.0069 1.5E-07 62.2 7.0 81 594-680 114-206 (237)
100 PF13246 Hydrolase_like2: Puta 96.4 0.0044 9.6E-08 53.7 4.7 63 488-555 19-90 (91)
101 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.014 3.1E-07 58.4 8.8 40 594-634 17-56 (204)
102 COG4030 Uncharacterized protei 96.4 0.022 4.8E-07 56.3 9.5 118 594-713 83-263 (315)
103 PRK14502 bifunctional mannosyl 96.3 0.016 3.6E-07 67.2 10.1 39 595-634 434-472 (694)
104 PRK08942 D,D-heptose 1,7-bisph 96.3 0.02 4.4E-07 56.3 9.5 114 594-711 29-176 (181)
105 PRK11587 putative phosphatase; 96.3 0.019 4E-07 58.4 9.4 110 594-707 83-203 (218)
106 TIGR01428 HAD_type_II 2-haloal 96.3 0.012 2.6E-07 58.7 7.7 85 594-680 92-187 (198)
107 TIGR02253 CTE7 HAD superfamily 96.1 0.019 4.1E-07 58.3 8.4 90 594-685 94-196 (221)
108 PHA02530 pseT polynucleotide k 96.0 0.018 3.9E-07 61.6 8.0 90 591-681 184-292 (300)
109 PLN02575 haloacid dehalogenase 96.0 0.033 7.1E-07 61.1 9.7 109 594-707 216-337 (381)
110 TIGR01668 YqeG_hyp_ppase HAD s 96.0 0.024 5.2E-07 55.3 7.8 85 593-680 42-131 (170)
111 PRK06769 hypothetical protein; 95.9 0.023 4.9E-07 55.6 7.1 86 595-682 29-134 (173)
112 TIGR02009 PGMB-YQAB-SF beta-ph 95.8 0.016 3.5E-07 56.9 5.9 83 593-680 87-181 (185)
113 PRK09449 dUMP phosphatase; Pro 95.8 0.039 8.3E-07 56.2 8.7 111 594-710 95-221 (224)
114 TIGR02254 YjjG/YfnB HAD superf 95.8 0.025 5.5E-07 57.3 7.4 111 594-709 97-222 (224)
115 TIGR01685 MDP-1 magnesium-depe 95.7 0.038 8.3E-07 53.9 7.8 90 593-683 44-155 (174)
116 PRK14988 GMP/IMP nucleotidase; 95.7 0.025 5.3E-07 57.9 6.8 92 593-685 92-195 (224)
117 COG4359 Uncharacterized conser 95.7 0.027 5.9E-07 54.0 6.4 87 594-682 73-183 (220)
118 TIGR01990 bPGM beta-phosphoglu 95.5 0.021 4.6E-07 56.0 5.7 83 593-680 86-180 (185)
119 TIGR01509 HAD-SF-IA-v3 haloaci 95.5 0.039 8.5E-07 53.9 7.4 83 594-679 85-178 (183)
120 PF13419 HAD_2: Haloacid dehal 95.5 0.018 3.8E-07 55.5 4.8 86 593-680 76-172 (176)
121 TIGR01656 Histidinol-ppas hist 95.5 0.032 7E-07 52.9 6.4 86 594-680 27-140 (147)
122 PLN02779 haloacid dehalogenase 95.3 0.067 1.4E-06 56.9 9.0 112 594-708 144-269 (286)
123 COG2179 Predicted hydrolase of 95.3 0.059 1.3E-06 51.2 7.4 79 593-673 45-126 (175)
124 TIGR02463 MPGP_rel mannosyl-3- 95.3 0.05 1.1E-06 55.3 7.4 57 627-683 155-220 (221)
125 TIGR01549 HAD-SF-IA-v1 haloaci 94.9 0.06 1.3E-06 51.2 6.6 83 594-678 64-154 (154)
126 TIGR00213 GmhB_yaeD D,D-heptos 94.7 0.13 2.8E-06 50.3 8.3 108 595-707 27-174 (176)
127 smart00775 LNS2 LNS2 domain. T 94.6 0.42 9.1E-06 45.9 11.4 87 592-679 25-140 (157)
128 PLN02940 riboflavin kinase 94.6 0.1 2.2E-06 57.9 8.0 109 594-706 93-215 (382)
129 PRK05446 imidazole glycerol-ph 94.5 0.11 2.4E-06 56.6 7.8 89 593-682 29-145 (354)
130 TIGR01681 HAD-SF-IIIC HAD-supe 94.5 0.1 2.2E-06 48.3 6.5 80 594-676 29-126 (128)
131 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.4 0.19 4.1E-06 52.0 9.3 90 587-677 17-114 (242)
132 PF09419 PGP_phosphatase: Mito 94.3 0.21 4.6E-06 48.3 8.5 76 592-667 57-145 (168)
133 PRK14501 putative bifunctional 94.0 0.2 4.3E-06 60.5 9.6 41 594-634 514-554 (726)
134 PF06888 Put_Phosphatase: Puta 93.9 0.17 3.7E-06 51.8 7.4 79 594-672 71-183 (234)
135 TIGR01533 lipo_e_P4 5'-nucleot 93.8 0.22 4.7E-06 52.1 8.2 82 592-675 116-205 (266)
136 TIGR02252 DREG-2 REG-2-like, H 93.6 0.18 4E-06 50.3 7.0 82 594-679 105-199 (203)
137 smart00577 CPDc catalytic doma 93.5 0.06 1.3E-06 51.2 3.1 88 592-681 43-138 (148)
138 PLN02811 hydrolase 93.4 0.1 2.2E-06 53.0 5.0 87 593-681 77-180 (220)
139 TIGR01664 DNA-3'-Pase DNA 3'-p 93.1 0.38 8.3E-06 46.6 8.1 84 596-680 44-157 (166)
140 KOG4383 Uncharacterized conser 93.0 4.1 8.9E-05 46.7 16.6 38 237-274 161-198 (1354)
141 TIGR01261 hisB_Nterm histidino 92.9 0.33 7.1E-06 46.9 7.2 88 594-682 29-144 (161)
142 TIGR01686 FkbH FkbH-like domai 92.7 0.33 7.2E-06 52.5 7.8 90 594-684 31-129 (320)
143 KOG3120 Predicted haloacid deh 92.6 0.45 9.7E-06 47.3 7.6 96 593-688 83-213 (256)
144 TIGR01691 enolase-ppase 2,3-di 92.5 0.62 1.3E-05 47.4 9.0 89 592-682 93-193 (220)
145 COG3769 Predicted hydrolase (H 92.0 0.83 1.8E-05 45.4 8.7 37 598-635 27-63 (274)
146 TIGR00685 T6PP trehalose-phosp 91.6 0.16 3.4E-06 52.6 3.6 69 638-711 160-239 (244)
147 PLN02919 haloacid dehalogenase 91.2 0.57 1.2E-05 58.8 8.5 110 594-707 161-285 (1057)
148 PHA02597 30.2 hypothetical pro 90.9 0.45 9.7E-06 47.3 5.9 86 594-682 74-171 (197)
149 PTZ00174 phosphomannomutase; P 90.6 0.21 4.6E-06 51.8 3.4 59 638-698 179-244 (247)
150 TIGR02247 HAD-1A3-hyp Epoxide 89.8 0.39 8.3E-06 48.3 4.4 86 593-680 93-191 (211)
151 PLN02580 trehalose-phosphatase 88.3 0.64 1.4E-05 51.1 5.0 70 638-712 291-374 (384)
152 PF05116 S6PP: Sucrose-6F-phos 88.1 1.8 3.9E-05 44.9 8.0 74 599-690 133-212 (247)
153 PRK10563 6-phosphogluconate ph 87.5 1.3 2.8E-05 44.8 6.5 87 593-683 87-184 (221)
154 PF13344 Hydrolase_6: Haloacid 87.3 0.56 1.2E-05 41.4 3.2 85 587-678 7-99 (101)
155 PLN02645 phosphoglycolate phos 87.1 1.4 3E-05 47.5 6.7 91 587-681 37-134 (311)
156 PRK09456 ?-D-glucose-1-phospha 86.9 2.6 5.6E-05 42.0 8.1 85 594-681 84-181 (199)
157 TIGR01675 plant-AP plant acid 86.5 3.3 7.1E-05 42.3 8.6 79 592-671 118-209 (229)
158 PRK10725 fructose-1-P/6-phosph 85.8 1.8 4E-05 42.4 6.4 83 595-680 89-181 (188)
159 TIGR01993 Pyr-5-nucltdase pyri 85.3 2 4.4E-05 42.0 6.3 82 594-680 84-180 (184)
160 PRK10444 UMP phosphatase; Prov 83.6 3.1 6.8E-05 43.2 7.1 84 587-677 10-100 (248)
161 PLN02177 glycerol-3-phosphate 82.6 8.1 0.00018 44.3 10.5 109 595-709 111-242 (497)
162 TIGR02251 HIF-SF_euk Dullard-l 76.6 1.2 2.5E-05 43.0 1.1 84 592-677 40-131 (162)
163 PF03767 Acid_phosphat_B: HAD 75.7 4.1 8.8E-05 41.7 4.9 78 594-673 115-207 (229)
164 COG1011 Predicted hydrolase (H 75.6 12 0.00025 37.8 8.3 88 594-684 99-199 (229)
165 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.0 13 0.00029 38.4 8.6 86 587-679 10-103 (249)
166 PRK10748 flavin mononucleotide 74.6 4.4 9.6E-05 41.6 4.9 81 594-683 113-206 (238)
167 TIGR01684 viral_ppase viral ph 73.9 5.9 0.00013 41.8 5.5 41 595-636 146-187 (301)
168 PLN03017 trehalose-phosphatase 72.9 24 0.00051 38.7 10.0 62 645-711 283-355 (366)
169 PHA03398 viral phosphatase sup 72.4 6.6 0.00014 41.5 5.4 41 595-636 148-189 (303)
170 TIGR01452 PGP_euk phosphoglyco 72.4 12 0.00027 39.4 7.7 92 587-682 11-108 (279)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 71.1 9 0.00019 39.9 6.2 48 587-635 10-64 (257)
172 PF02358 Trehalose_PPase: Treh 70.3 15 0.00032 37.7 7.5 41 594-634 19-59 (235)
173 PRK00192 mannosyl-3-phosphogly 67.3 9 0.00019 40.2 5.3 43 592-635 19-61 (273)
174 TIGR01493 HAD-SF-IA-v2 Haloaci 66.8 5.2 0.00011 38.6 3.2 75 594-677 90-175 (175)
175 COG0241 HisB Histidinol phosph 65.4 15 0.00033 36.0 6.0 85 595-680 32-144 (181)
176 PF08235 LNS2: LNS2 (Lipin/Ned 64.7 46 0.001 31.9 9.0 88 592-680 25-141 (157)
177 PRK14179 bifunctional 5,10-met 64.5 42 0.00092 35.5 9.5 63 638-700 137-207 (284)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 60.5 10 0.00023 39.4 4.2 109 596-709 122-252 (257)
179 TIGR02463 MPGP_rel mannosyl-3- 60.0 15 0.00033 37.0 5.2 40 595-635 17-56 (221)
180 TIGR01663 PNK-3'Pase polynucle 59.3 26 0.00056 40.5 7.4 80 595-675 198-301 (526)
181 COG0637 Predicted phosphatase/ 58.9 28 0.00061 35.3 7.0 89 592-682 84-183 (221)
182 PLN02205 alpha,alpha-trehalose 58.4 13 0.00028 45.7 5.0 60 645-711 762-841 (854)
183 PF12689 Acid_PPase: Acid Phos 57.8 21 0.00047 34.6 5.5 79 595-674 46-140 (169)
184 COG0647 NagD Predicted sugar p 56.3 1.2E+02 0.0026 31.9 11.1 110 586-703 16-130 (269)
185 TIGR00262 trpA tryptophan synt 56.1 1.1E+02 0.0024 31.9 10.9 94 589-685 119-228 (256)
186 PRK14194 bifunctional 5,10-met 56.0 62 0.0013 34.5 9.1 63 638-700 138-208 (301)
187 COG3700 AphA Acid phosphatase 55.3 24 0.00051 34.2 5.1 83 595-683 115-210 (237)
188 KOG3040 Predicted sugar phosph 55.0 23 0.0005 35.2 5.2 49 586-635 15-66 (262)
189 TIGR02244 HAD-IG-Ncltidse HAD 53.9 48 0.001 36.1 8.0 37 596-633 186-223 (343)
190 TIGR01680 Veg_Stor_Prot vegeta 52.9 72 0.0016 33.4 8.7 78 592-671 143-235 (275)
191 TIGR01456 CECR5 HAD-superfamil 52.8 55 0.0012 35.3 8.4 83 587-677 9-103 (321)
192 PLN02423 phosphomannomutase 49.9 21 0.00044 37.0 4.3 45 639-685 181-232 (245)
193 PRK09479 glpX fructose 1,6-bis 49.5 44 0.00096 35.5 6.5 83 589-675 161-282 (319)
194 PHA02669 hypothetical protein; 47.9 39 0.00084 31.9 5.2 48 168-218 1-49 (210)
195 COG0078 ArgF Ornithine carbamo 47.7 69 0.0015 34.0 7.6 76 597-674 87-169 (310)
196 PF01729 QRPTase_C: Quinolinat 44.6 1.6E+02 0.0034 28.6 9.2 86 599-685 66-156 (169)
197 PF12710 HAD: haloacid dehalog 43.2 13 0.00027 36.3 1.5 13 433-445 1-13 (192)
198 cd04724 Tryptophan_synthase_al 42.9 1.9E+02 0.0041 29.7 10.2 89 593-684 112-215 (242)
199 TIGR01460 HAD-SF-IIA Haloacid 42.6 93 0.002 31.8 7.8 86 587-679 7-101 (236)
200 PF00875 DNA_photolyase: DNA p 41.9 1.1E+02 0.0025 29.1 7.9 73 600-674 56-134 (165)
201 PF03120 DNA_ligase_OB: NAD-de 41.8 14 0.0003 31.2 1.3 22 245-266 45-67 (82)
202 cd01516 FBPase_glpX Bacterial 40.7 76 0.0017 33.6 6.6 84 589-675 158-279 (309)
203 PRK14174 bifunctional 5,10-met 40.1 1.2E+02 0.0025 32.4 8.1 61 639-700 139-212 (295)
204 PLN02151 trehalose-phosphatase 39.9 40 0.00087 36.8 4.7 69 638-711 259-341 (354)
205 PLN02591 tryptophan synthase 39.7 2.1E+02 0.0046 29.7 9.8 95 587-684 109-218 (250)
206 CHL00200 trpA tryptophan synth 39.2 3.1E+02 0.0068 28.7 11.1 95 589-685 123-232 (263)
207 PF00389 2-Hacid_dh: D-isomer 39.0 3E+02 0.0065 25.0 12.2 87 590-685 2-90 (133)
208 PF15584 Imm44: Immunity prote 38.4 16 0.00035 31.2 1.1 19 252-270 13-31 (94)
209 PRK12415 fructose 1,6-bisphosp 37.5 89 0.0019 33.4 6.6 84 589-675 159-280 (322)
210 PRK13125 trpA tryptophan synth 36.8 1.8E+02 0.0039 29.9 8.9 87 597-684 116-214 (244)
211 TIGR03849 arch_ComA phosphosul 36.7 1.5E+02 0.0033 30.4 8.0 63 596-662 40-117 (237)
212 PTZ00174 phosphomannomutase; P 35.9 1.3E+02 0.0027 31.0 7.6 36 594-630 22-57 (247)
213 TIGR02250 FCP1_euk FCP1-like p 35.6 53 0.0011 31.4 4.3 43 592-636 56-98 (156)
214 TIGR01689 EcbF-BcbF capsule bi 33.0 52 0.0011 30.3 3.7 33 593-626 23-55 (126)
215 PRK04302 triosephosphate isome 31.7 2.4E+02 0.0052 28.5 8.7 89 594-685 98-203 (223)
216 PRK14189 bifunctional 5,10-met 31.4 2.1E+02 0.0046 30.3 8.4 63 638-701 137-208 (285)
217 PF06506 PrpR_N: Propionate ca 31.3 1.2E+02 0.0025 29.5 6.1 103 600-723 67-172 (176)
218 PRK15122 magnesium-transportin 31.2 4.6E+02 0.01 32.7 12.6 76 194-275 123-209 (903)
219 TIGR00330 glpX fructose-1,6-bi 30.7 1.5E+02 0.0032 31.5 6.8 84 589-675 158-291 (321)
220 TIGR00603 rad25 DNA repair hel 30.5 2.1E+02 0.0046 34.5 9.1 53 610-664 495-548 (732)
221 KOG2882 p-Nitrophenyl phosphat 30.3 1.8E+02 0.0039 30.8 7.4 89 587-678 31-125 (306)
222 PF00763 THF_DHG_CYH: Tetrahyd 30.3 1.2E+02 0.0026 27.4 5.6 64 592-656 9-85 (117)
223 cd01715 ETF_alpha The electron 30.0 4E+02 0.0086 25.5 9.6 88 593-680 11-107 (168)
224 cd01994 Alpha_ANH_like_IV This 29.9 2.7E+02 0.0059 27.6 8.5 43 599-642 12-67 (194)
225 COG0659 SUL1 Sulfate permease 29.5 3.4E+02 0.0074 31.7 10.4 49 142-190 351-400 (554)
226 PRK12388 fructose-1,6-bisphosp 29.4 1.6E+02 0.0035 31.4 6.9 84 589-675 158-291 (321)
227 TIGR01647 ATPase-IIIA_H plasma 29.0 4.6E+02 0.0099 32.0 11.9 73 197-275 70-147 (755)
228 PF13242 Hydrolase_like: HAD-h 28.1 91 0.002 25.3 4.1 46 658-705 21-73 (75)
229 PF01455 HupF_HypC: HupF/HypC 27.7 1.2E+02 0.0025 24.7 4.4 22 241-262 26-50 (68)
230 PRK15424 propionate catabolism 27.2 4.6E+02 0.01 30.5 10.9 69 598-669 95-165 (538)
231 cd00860 ThrRS_anticodon ThrRS 26.8 2.5E+02 0.0055 23.2 6.8 47 588-635 6-53 (91)
232 PRK14184 bifunctional 5,10-met 26.7 1.3E+02 0.0027 32.0 5.7 62 638-700 136-210 (286)
233 PRK07226 fructose-bisphosphate 26.6 1.8E+02 0.0039 30.4 7.0 74 592-669 121-206 (267)
234 TIGR01501 MthylAspMutase methy 26.2 3.1E+02 0.0067 25.5 7.5 67 586-655 56-130 (134)
235 PTZ00314 inosine-5'-monophosph 26.1 4E+02 0.0086 30.7 10.1 95 583-680 202-305 (495)
236 PRK14172 bifunctional 5,10-met 25.9 1.5E+02 0.0034 31.2 6.2 63 638-701 137-208 (278)
237 PRK14191 bifunctional 5,10-met 25.8 1.5E+02 0.0032 31.4 6.0 63 638-701 136-207 (285)
238 COG1585 Membrane protein impli 25.8 3.6E+02 0.0077 25.3 8.0 19 241-259 110-128 (140)
239 PRK14192 bifunctional 5,10-met 25.8 1.5E+02 0.0032 31.4 6.1 66 591-656 11-89 (283)
240 PF04273 DUF442: Putative phos 24.9 3E+02 0.0064 24.6 7.0 73 600-674 17-102 (110)
241 PF12791 RsgI_N: Anti-sigma fa 24.6 1.2E+02 0.0026 23.3 3.8 39 219-266 3-42 (56)
242 COG1171 IlvA Threonine dehydra 24.4 1.5E+02 0.0032 32.3 5.8 58 615-676 79-138 (347)
243 PRK14175 bifunctional 5,10-met 24.2 1.4E+02 0.0031 31.6 5.6 63 638-701 137-208 (286)
244 PF13380 CoA_binding_2: CoA bi 24.0 1.3E+02 0.0028 27.0 4.6 40 595-635 64-104 (116)
245 cd05017 SIS_PGI_PMI_1 The memb 22.8 2E+02 0.0043 25.7 5.6 42 595-639 55-96 (119)
246 TIGR03128 RuMP_HxlA 3-hexulose 22.8 5.4E+02 0.012 25.3 9.4 87 597-685 89-187 (206)
247 TIGR03882 cyclo_dehyd_2 bacter 22.5 2.8E+02 0.006 27.5 7.0 100 596-719 58-161 (193)
248 PRK14169 bifunctional 5,10-met 22.4 1.7E+02 0.0036 31.0 5.6 62 638-700 135-205 (282)
249 cd04726 KGPDC_HPS 3-Keto-L-gul 22.4 7.3E+02 0.016 24.2 10.8 85 597-684 90-186 (202)
250 cd00210 PTS_IIA_glc PTS_IIA, P 22.3 96 0.0021 28.5 3.4 53 252-304 25-99 (124)
251 TIGR00830 PTBA PTS system, glu 22.1 94 0.002 28.4 3.3 53 252-304 25-99 (121)
252 PLN02527 aspartate carbamoyltr 21.9 3.7E+02 0.0081 28.8 8.3 72 596-669 83-162 (306)
253 PRK14167 bifunctional 5,10-met 21.9 1.8E+02 0.0039 31.0 5.8 62 638-700 136-210 (297)
254 PRK14170 bifunctional 5,10-met 21.8 2E+02 0.0044 30.4 6.1 62 638-700 136-206 (284)
255 PRK14177 bifunctional 5,10-met 21.3 1.8E+02 0.0039 30.8 5.6 64 591-654 11-87 (284)
256 PRK13111 trpA tryptophan synth 21.2 7.3E+02 0.016 25.8 10.1 90 593-684 125-228 (258)
257 PRK14185 bifunctional 5,10-met 20.9 2E+02 0.0043 30.6 5.8 62 638-700 136-210 (293)
258 TIGR03679 arCOG00187 arCOG0018 20.8 6.5E+02 0.014 25.3 9.5 66 599-666 10-94 (218)
259 KOG3167 Box H/ACA snoRNP compo 20.7 77 0.0017 29.3 2.3 32 592-624 57-88 (153)
260 TIGR02765 crypto_DASH cryptoch 20.7 1.3E+02 0.0027 33.9 4.7 48 598-646 62-111 (429)
261 COG3742 Uncharacterized protei 20.6 1.4E+02 0.0029 27.4 3.8 73 593-667 47-120 (131)
262 TIGR01459 HAD-SF-IIA-hyp4 HAD- 20.5 89 0.0019 32.0 3.2 82 596-680 140-236 (242)
263 cd04728 ThiG Thiazole synthase 20.1 5.2E+02 0.011 26.8 8.3 80 589-672 99-188 (248)
No 1
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-127 Score=1095.73 Aligned_cols=593 Identities=34% Similarity=0.501 Sum_probs=527.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHhhh
Q 004479 106 REHLQLCCCAAALFLAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGNS 185 (750)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g~~ 185 (750)
++.+...++++++++..+... ..+ +...|+++.++++++++.|||||+.+|+.++++++|||+|++++++++|++|.|
T Consensus 89 ~~~~i~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~ 166 (713)
T COG2217 89 RRLIIAGLLTLPLLLLSLGLL-LGA-FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLY 166 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-cch-hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Confidence 334444555666655433222 111 345678889999999999999999999999999999999999999999999998
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEE
Q 004479 186 --------LEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYIL 257 (750)
Q Consensus 186 --------~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~ 257 (750)
.+++++++++.+|+++|.+.+.|+++++++|+++.|++++++++++ ++++||++||++||+|.
T Consensus 167 ~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~---------~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 167 ATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDG---------EEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCC---------cEEEEEHHHCCCCCEEE
Confidence 8899999999999999999999999999999999999999887642 48999999999999999
Q ss_pred EcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCch
Q 004479 258 VGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPK 337 (750)
Q Consensus 258 v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~ 337 (750)
|+|||+||+||+|++|++.||||+|||||.||+|.+||.|++||+|.+|.++++|+++|.||+++||+++++++|.+|+|
T Consensus 238 VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~ 317 (713)
T COG2217 238 VRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAP 317 (713)
T ss_pred ECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCc
Q 004479 338 LQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGI 416 (750)
Q Consensus 338 ~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gi 416 (750)
+||++||++.+|+|.++++++++++ .|++....++..++++++++|+++|||||+++ |+++..++++++|+||
T Consensus 318 iqrlaDr~a~~fvp~vl~ia~l~f~------~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GI 391 (713)
T COG2217 318 IQRLADRVASYFVPVVLVIAALTFA------LWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGI 391 (713)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHH------HHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCce
Confidence 9999999999999999888888754 24444334567799999999999999999997 9999999999999999
Q ss_pred cccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHH
Q 004479 417 LLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRA 496 (750)
Q Consensus 417 lvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~A 496 (750)
|+|+++++|+++++|+++||||||||+|+|+|+++.+.++ + ++++|++++++|++|+||+++|
T Consensus 392 LiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~----------------e~~~L~laAalE~~S~HPiA~A 454 (713)
T COG2217 392 LIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-D----------------EDELLALAAALEQHSEHPLAKA 454 (713)
T ss_pred EEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-C----------------HHHHHHHHHHHHhcCCChHHHH
Confidence 9999999999999999999999999999999999987755 3 7899999999999999999999
Q ss_pred HHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEE
Q 004479 497 VVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFV 576 (750)
Q Consensus 497 i~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 576 (750)
|++++.+++ ...+..|++++|+|+.+.++|.. +..|+++++.+.....+......+ .....|.+.+
T Consensus 455 Iv~~a~~~~--~~~~~~~~~i~G~Gv~~~v~g~~----------v~vG~~~~~~~~~~~~~~~~~~~~--~~~~~G~t~v 520 (713)
T COG2217 455 IVKAAAERG--LPDVEDFEEIPGRGVEAEVDGER----------VLVGNARLLGEEGIDLPLLSERIE--ALESEGKTVV 520 (713)
T ss_pred HHHHHHhcC--CCCccceeeeccCcEEEEECCEE----------EEEcCHHHHhhcCCCccchhhhHH--HHHhcCCeEE
Confidence 999887766 33456699999999999998743 567889888754322211111111 1123466766
Q ss_pred EEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhh
Q 004479 577 HAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRD 656 (750)
Q Consensus 577 ~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~ 656 (750)
+++. +++.+|+++++|++||+++++|++||+ .|++++||||||+.+|++||+++||++++|+++||||+++|++||++
T Consensus 521 ~va~-dg~~~g~i~~~D~~R~~a~~aI~~L~~-~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPedK~~~V~~l~~~ 598 (713)
T COG2217 521 FVAV-DGKLVGVIALADELRPDAKEAIAALKA-LGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPEDKAEIVRELQAE 598 (713)
T ss_pred EEEE-CCEEEEEEEEeCCCChhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcChHhheccCCcHHHHHHHHHHHhc
Confidence 6654 245699999999999999999999999 59999999999999999999999999999999999999999999988
Q ss_pred cCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 657 MGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILAS 736 (750)
Q Consensus 657 ~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~ 736 (750)
|++|+|||||+||+|||++||||||||. |||+|+|+||++|++||++++++++++||+|+++||||++|+++||.+++
T Consensus 599 -g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~i 676 (713)
T COG2217 599 -GRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676 (713)
T ss_pred -CCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 99999999999999999999999999999999999999999999998887
Q ss_pred HHHHhhcccccccC
Q 004479 737 LPSVLGFLPLWLTV 750 (750)
Q Consensus 737 i~~~~G~l~~~~av 750 (750)
.++++|+++||+|+
T Consensus 677 plA~~g~l~p~~A~ 690 (713)
T COG2217 677 PLAAGGLLTPWIAA 690 (713)
T ss_pred HHHHHhhcCHHHHH
Confidence 77888999999873
No 2
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-120 Score=1013.85 Aligned_cols=663 Identities=31% Similarity=0.422 Sum_probs=564.1
Q ss_pred ccccccceeccCCCcceeecccccccccCCCcccccccCCCcccccccccccccccccCCcCCCCccHHHHHHHHHhcCh
Q 004479 19 TRSIRLKRVNSLKPTLSFTHPVIRFNFKPLNYRPVNCLSHPHINHQHHYHDHHHHHRHNDCSELSGPQKAVIKFAKATRW 98 (750)
Q Consensus 19 ~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (750)
.+||.+.+|++++.++.|.+++... .-++.++.+......| ....... ...+. ..-++
T Consensus 171 l~gV~~~sv~~~t~~~~V~~~~~~~-~pr~i~k~ie~~~~~~--------~~~~~~~--------~~~~~-----~l~~~ 228 (951)
T KOG0207|consen 171 LRGVKSFSVSLATDTAIVVYDPEIT-GPRDIIKAIEETGFEA--------SVRPYGD--------TTFKN-----SLKHK 228 (951)
T ss_pred ccCeeEEEEeccCCceEEEeccccc-ChHHHHHHHHhhcccc--------eeeeccc--------cchhh-----hhhhh
Confidence 4699999999999999998753322 1122222222111111 0000000 00010 23356
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccccCC-----------CCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCCC
Q 004479 99 LDLANFLREHLQLCCCAAALFLAAAACPYLLP-----------KPAIKPLQNAFLAVAFPLVGVSASLDALTDIAGGKVN 167 (750)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~ 167 (750)
..+.+|.++++..+++++|++++.++++++.+ .+...+++++|.+++++..|||||..||++|++|+.|
T Consensus 229 ~ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~n 308 (951)
T KOG0207|consen 229 EEIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSAN 308 (951)
T ss_pred hHHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcCCCC
Confidence 67788889999999999999998877765433 2223567888899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCC
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLA---------------MFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDD 232 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~---------------~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~ 232 (750)
||+|++++++++|+++.+.++..++. ++.+++++|...+.|+..++.+|+++.|.++.++.++.
T Consensus 309 MdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~- 387 (951)
T KOG0207|consen 309 MDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGS- 387 (951)
T ss_pred ceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCC-
Confidence 99999999999999998777665555 88999999999999999999999999999999998773
Q ss_pred CCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEE
Q 004479 233 NLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKA 312 (750)
Q Consensus 233 ~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v 312 (750)
.+++||++.|++||+|.|.||++||+||+|++|+++||||++|||++||.|++|++|.+||+|.+|.+.+++
T Consensus 388 --------~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~Vka 459 (951)
T KOG0207|consen 388 --------EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKA 459 (951)
T ss_pred --------cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEE
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc----chhhhHHHHHHHH
Q 004479 313 TKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT----SVCRGSVYRALGL 388 (750)
Q Consensus 313 ~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~----~~~~~~~~~al~v 388 (750)
|++|.||++++|++++++||.+|+|+|+++||++.||+|++++++++++++.+++..|.+... ..+..++..++++
T Consensus 460 T~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisV 539 (951)
T KOG0207|consen 460 TKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISV 539 (951)
T ss_pred EeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheE
Confidence 999999999999999999999999999999999999999999999999887766665544333 4566789999999
Q ss_pred HHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCcccc
Q 004479 389 MVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDI 467 (750)
Q Consensus 389 lv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~ 467 (750)
++++|||+|+++ |++++.|.+..+++|+|+|+++.||.+.++++|+||||||||+|+|.|+++....+.
T Consensus 540 lviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------- 609 (951)
T KOG0207|consen 540 LVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------- 609 (951)
T ss_pred EEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----------
Confidence 999999999998 999999999999999999999999999999999999999999999999999876542
Q ss_pred ccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCC--CCCccccceeeecCCe--EEEEEeCeeeccCCCceeeecc
Q 004479 468 SCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKD--LPSVSIDRFEYFPGRG--LTATVNGIESGTEGGKELKASL 543 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~--~~~~~~~~~~~~~g~g--~~~~v~~~~~~~~~~~~~~~~k 543 (750)
.+..+.|.++++.|..|+||+++||++|+++.. .+...+.+|+++||+| +.+.+++.+ ...
T Consensus 610 -----~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~----------i~i 674 (951)
T KOG0207|consen 610 -----ISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNE----------VLI 674 (951)
T ss_pred -----ccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeE----------Eee
Confidence 248899999999999999999999999997765 3445577899999999 555555532 567
Q ss_pred CchHHHhhhccChhHHHHHHHHhc-ccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCH
Q 004479 544 GSVDFITSLCKSEDESRKIKEAVN-GSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHE 622 (750)
Q Consensus 544 Gs~~~i~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~ 622 (750)
|+.+++.+......+. +..... .+..|.+.+++++ +++.+|++.++|++|||+..+|+.||+ .|++++||||||.
T Consensus 675 GN~~~~~r~~~~~~~~--i~~~~~~~e~~g~tvv~v~v-n~~l~gv~~l~D~vr~~a~~av~~Lk~-~Gi~v~mLTGDn~ 750 (951)
T KOG0207|consen 675 GNKEWMSRNGCSIPDD--ILDALTESERKGQTVVYVAV-NGQLVGVFALEDQVRPDAALAVAELKS-MGIKVVMLTGDND 750 (951)
T ss_pred chHHHHHhcCCCCchh--HHHhhhhHhhcCceEEEEEE-CCEEEEEEEeccccchhHHHHHHHHHh-cCceEEEEcCCCH
Confidence 9999987654433211 222222 2234667777765 467799999999999999999999999 5999999999999
Q ss_pred HHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecC
Q 004479 623 SSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRN 702 (750)
Q Consensus 623 ~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~ 702 (750)
.+|+++|+++||++|||+++|+||.++|+++|++ |++|+|||||+||+|||++|||||+||. |+|+|+|+|||+||++
T Consensus 751 ~aA~svA~~VGi~~V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig~-gs~vAieaADIVLmrn 828 (951)
T KOG0207|consen 751 AAARSVAQQVGIDNVYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIGA-GSDVAIEAADIVLMRN 828 (951)
T ss_pred HHHHHHHHhhCcceEEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeecc-ccHHHHhhCCEEEEcc
Confidence 9999999999999999999999999999999998 8999999999999999999999999997 7999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 703 NISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGF 743 (750)
Q Consensus 703 ~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~ 743 (750)
||.+++.+++++|+++++||+|+.|++.||++.+.+++.+|
T Consensus 829 ~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF 869 (951)
T KOG0207|consen 829 DLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVF 869 (951)
T ss_pred chhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecc
Confidence 99999999999999999999999999999976443343333
No 3
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.4e-104 Score=931.05 Aligned_cols=557 Identities=32% Similarity=0.515 Sum_probs=502.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHCCCC-ChHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 141 FLAVAFPLVGVSASLDALTDIAGGKV-NIHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKEN 219 (750)
Q Consensus 141 ~~~~~~~~~g~~~~~~a~~~l~~~~~-~~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~ 219 (750)
+++..+++.||||+++||+.+++|++ |||+|+++|+++++++|.|.+++++++++.+++++|.|.+.|+++.+++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l 240 (741)
T PRK11033 161 AFIATTLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL 240 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33345578999999999999999884 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCC
Q 004479 220 YPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPG 299 (750)
Q Consensus 220 ~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~a 299 (750)
.|++++++|+| ++++|++++|+|||+|+|+|||+||+||+|++|++.||||+|||||.|++|++||.||+
T Consensus 241 ~p~~a~vir~g----------~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~a 310 (741)
T PRK11033 241 VPETATRLRDG----------EREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPA 310 (741)
T ss_pred CCCEEEEEECC----------EEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeecc
Confidence 99999999977 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhh
Q 004479 300 GARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCR 379 (750)
Q Consensus 300 Gt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~ 379 (750)
||+|.+|.++++|+++|.+|+++||.+++++++.+|+|+|+++|+++++|+|++++++++++++.++++ ...+.
T Consensus 311 Gt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~------~~~~~ 384 (741)
T PRK11033 311 GATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF------AAPWQ 384 (741)
T ss_pred CCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCCHH
Confidence 999999999999999999999999999999999999999999999999999999999998865532222 12456
Q ss_pred hHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcc
Q 004479 380 GSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW 458 (750)
Q Consensus 380 ~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~ 458 (750)
.++++++++|+++|||||+++ |+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|+++.+.++..
T Consensus 385 ~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~ 464 (741)
T PRK11033 385 EWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS 464 (741)
T ss_pred HHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC
Confidence 689999999999999999997 9999999999999999999999999999999999999999999999999998765432
Q ss_pred cccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCce
Q 004479 459 IRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKE 538 (750)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~ 538 (750)
+++++.+++++|+++.||+++||++++..++.+.....+++..+|+|+.+.++|..
T Consensus 465 ----------------~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~-------- 520 (741)
T PRK11033 465 ----------------ESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGER-------- 520 (741)
T ss_pred ----------------HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEE--------
Confidence 67889999999999999999999999987766655677899999999999887643
Q ss_pred eeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEec
Q 004479 539 LKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLT 618 (750)
Q Consensus 539 ~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlT 618 (750)
+..|+++++.+. ..+....+.+ ....|.+.++++. ++..+|++.++|++|||++++|++||+ .|++++|+|
T Consensus 521 --~~ig~~~~~~~~--~~~~~~~~~~---~~~~g~~~v~va~-~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llT 591 (741)
T PRK11033 521 --VLICAPGKLPPL--ADAFAGQINE---LESAGKTVVLVLR-NDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLT 591 (741)
T ss_pred --EEEecchhhhhc--cHHHHHHHHH---HHhCCCEEEEEEE-CCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEc
Confidence 456888887541 1111111111 1245667777654 355699999999999999999999999 699999999
Q ss_pred CCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEE
Q 004479 619 GDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVL 698 (750)
Q Consensus 619 GD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADiv 698 (750)
||++.+|.++|+++||+ ++++++|+||.++|+++|+. +.|+|||||+||+|||++|||||+||. ++++++++||++
T Consensus 592 Gd~~~~a~~ia~~lgi~-~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adiv 667 (741)
T PRK11033 592 GDNPRAAAAIAGELGID-FRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAA 667 (741)
T ss_pred CCCHHHHHHHHHHcCCC-eecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEE
Confidence 99999999999999996 78999999999999999854 689999999999999999999999996 899999999999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 004479 699 LLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGFLPLWLTV 750 (750)
Q Consensus 699 L~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~l~~~~av 750 (750)
++++++..|++++++||+++++||||+.|+++||++++.++++|+++||+|+
T Consensus 668 l~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~ 719 (741)
T PRK11033 668 LTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAV 719 (741)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999999999999999999999999988877889999999863
No 4
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=3.9e-99 Score=906.13 Aligned_cols=561 Identities=29% Similarity=0.447 Sum_probs=494.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHhh----------------hHH-HHHHHHHHHHHHHH
Q 004479 139 NAFLAVAFPLVGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMGN----------------SLE-GGLLLAMFNLAHIA 201 (750)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g~----------------~~~-~~~i~~~~~l~~~~ 201 (750)
.++++++++++|+||+++||+++++|++|||+|++++++++|++|. |++ ++++++++.+|+++
T Consensus 223 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~l 302 (834)
T PRK10671 223 GLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302 (834)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999999999998752 444 67888899999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeecc
Q 004479 202 EEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEH 281 (750)
Q Consensus 202 e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~ 281 (750)
|.+.+.|+++.+++|.++.|++++++|+| ++++|++++|+|||+|+|+|||+||+||+|++|++.||||+
T Consensus 303 e~~~~~~~~~~~~~L~~l~p~~a~~~~~~----------~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~ 372 (834)
T PRK10671 303 EARARQRSSKALEKLLDLTPPTARVVTDE----------GEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAM 372 (834)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeCC----------cEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehh
Confidence 99999999999999999999999999876 67899999999999999999999999999999999999999
Q ss_pred ccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHH
Q 004479 282 LTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIA 361 (750)
Q Consensus 282 LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ 361 (750)
|||||.|+.|++||.||+||+|.+|.+.++|+++|.+|+++||.+++++++.+|+++|+++|+++++|+|++++++++++
T Consensus 373 lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~ 452 (834)
T PRK10671 373 LTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSA 452 (834)
T ss_pred hcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888765
Q ss_pred HHhhhhhhhccccc-chhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCC
Q 004479 362 LIGPFLFKWSFIGT-SVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTG 439 (750)
Q Consensus 362 ii~~~~~~~~~~~~-~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTG 439 (750)
++ |++.+. ..+...+.+++++|+++|||||+++ |+++..++++++|+||++|+++++|+++++|++||||||
T Consensus 453 ~~------~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTG 526 (834)
T PRK10671 453 AI------WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTG 526 (834)
T ss_pred HH------HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCC
Confidence 43 222221 1234567889999999999999997 999999999999999999999999999999999999999
Q ss_pred CCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecC
Q 004479 440 TLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPG 519 (750)
Q Consensus 440 TLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g 519 (750)
|||+|+|+|.++.+..+.. +++++.+++++|.+++||+++||++++.+.. ...+.+|++.+|
T Consensus 527 TLT~g~~~v~~~~~~~~~~----------------~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~--~~~~~~~~~~~g 588 (834)
T PRK10671 527 TLTEGKPQVVAVKTFNGVD----------------EAQALRLAAALEQGSSHPLARAILDKAGDMT--LPQVNGFRTLRG 588 (834)
T ss_pred ccccCceEEEEEEccCCCC----------------HHHHHHHHHHHhCCCCCHHHHHHHHHHhhCC--CCCcccceEecc
Confidence 9999999999987665432 6778999999999999999999999886443 345678999999
Q ss_pred CeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhH
Q 004479 520 RGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGV 599 (750)
Q Consensus 520 ~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a 599 (750)
+|+.+.++|.. +.+|+++++.+.....+..+...+. ....|.+.++++. ++..+|.+.++|++||++
T Consensus 589 ~Gv~~~~~g~~----------~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~v~va~-~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 589 LGVSGEAEGHA----------LLLGNQALLNEQQVDTKALEAEITA--QASQGATPVLLAV-DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred eEEEEEECCEE----------EEEeCHHHHHHcCCChHHHHHHHHH--HHhCCCeEEEEEE-CCEEEEEEEccCcchhhH
Confidence 99998876632 4679999886543322211111111 1234666666654 345699999999999999
Q ss_pred HHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCc
Q 004479 600 SDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 600 ~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdV 679 (750)
+++|++|++ .|++++|+|||++.+|+++++++||+++|+++.|++|.+.++.++++ |+.|+|+|||+||+|||++||+
T Consensus 656 ~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 656 VAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADV 733 (834)
T ss_pred HHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCe
Confidence 999999999 59999999999999999999999999999999999999999999988 8999999999999999999999
Q ss_pred cEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hh-ccccccc
Q 004479 680 GIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV------LG-FLPLWLT 749 (750)
Q Consensus 680 GIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~------~G-~l~~~~a 749 (750)
||+||. +++.++++||++++++++..|++++++||+++++|+||+.|+++||++++.+++ +| ++|||+|
T Consensus 734 gia~g~-g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 734 GIAMGG-GSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred eEEecC-CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHH
Confidence 999996 899999999999999999999999999999999999999999999977644443 35 5787765
No 5
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=3.4e-99 Score=867.15 Aligned_cols=538 Identities=32% Similarity=0.474 Sum_probs=483.1
Q ss_pred HhHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 149 VGVSASLDALTDIAGGKVNIHVLMAFAAFASIFMG-----------------NSLEGGLLLAMFNLAHIAEEFFTSRAMV 211 (750)
Q Consensus 149 ~g~~~~~~a~~~l~~~~~~~~~L~~la~~~a~~~g-----------------~~~~~~~i~~~~~l~~~~e~~~~~ra~~ 211 (750)
+||||+++||+++++|++|||+|++++++++|++| +|.+++++++++.+++++|.+.++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999863 2344567788889999999999999999
Q ss_pred HHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEee
Q 004479 212 DVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEA 291 (750)
Q Consensus 212 ~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k 291 (750)
.+++|.++.|++++++|+++ ++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~~---------~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k 151 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKDG---------SIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPK 151 (562)
T ss_pred HHHHHHhcCCCEEEEEECCC---------eEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEc
Confidence 99999999999999998753 678999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhc
Q 004479 292 KVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWS 371 (750)
Q Consensus 292 ~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~ 371 (750)
++||.||+||+|.+|.++++|+++|.+|+++||.+++++++.+|+|+|+++|+++++|+|++++++++++++ |.
T Consensus 152 ~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~------~~ 225 (562)
T TIGR01511 152 KVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVI------WL 225 (562)
T ss_pred CCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH------HH
Confidence 999999999999999999999999999999999999999999999999999999999999988887766332 32
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEE
Q 004479 372 FIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKA 450 (750)
Q Consensus 372 ~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~ 450 (750)
.++.+++++++++|||||+++ |+++..++++++|+||++|+++++|+|+++|++|||||||||+|+|+|++
T Consensus 226 --------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~ 297 (562)
T TIGR01511 226 --------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTD 297 (562)
T ss_pred --------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEE
Confidence 268999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCee
Q 004479 451 IEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIE 530 (750)
Q Consensus 451 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~ 530 (750)
+.+.++.. +++++.+++++|++|+||+++||++++.+++.+...+.++++.+|+|+.+.+++.+
T Consensus 298 i~~~~~~~----------------~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~ 361 (562)
T TIGR01511 298 VHVFGDRD----------------RTELLALAAALEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTK 361 (562)
T ss_pred EecCCCCC----------------HHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEE
Confidence 97664432 67889999999999999999999999977766555678999999999999987743
Q ss_pred eccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcC
Q 004479 531 SGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHA 610 (750)
Q Consensus 531 ~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~a 610 (750)
+.+|+++++.+.....++. ...|.+.+++.. ++..+|.+.++|++||+++++|++||+ .
T Consensus 362 ----------~~iG~~~~~~~~~~~~~~~---------~~~g~~~~~~~~-~~~~~g~~~~~d~l~~~a~e~i~~Lk~-~ 420 (562)
T TIGR01511 362 ----------IQLGNEKLLGENAIKIDGK---------AEQGSTSVLVAV-NGELAGVFALEDQLRPEAKEVIQALKR-R 420 (562)
T ss_pred ----------EEEECHHHHHhCCCCCChh---------hhCCCEEEEEEE-CCEEEEEEEecccccHHHHHHHHHHHH-c
Confidence 5689999875432211110 123556665543 355699999999999999999999999 5
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHH
Q 004479 611 RLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASAT 690 (750)
Q Consensus 611 gi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~ 690 (750)
|++++|+|||+..+++++++++||+ +|+++.|++|.++++.++++ ++.|+|+|||.||+||+++|||||+||. +++.
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g~-g~~~ 497 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN-VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIGA-GTDV 497 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc-EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeCC-cCHH
Confidence 9999999999999999999999997 99999999999999999987 8999999999999999999999999995 7899
Q ss_pred HHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh-ccccccc
Q 004479 691 AIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV-----LG-FLPLWLT 749 (750)
Q Consensus 691 A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~-----~G-~l~~~~a 749 (750)
++++||++++++++..+++++++||+++++|+||+.|+++||++.+.+++ +| +++||.|
T Consensus 498 a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~g~~~~p~~a 562 (562)
T TIGR01511 498 AIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPIGILLSPAVA 562 (562)
T ss_pred HHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCcC
Confidence 99999999999999999999999999999999999999999988766666 34 4677765
No 6
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=6.8e-98 Score=881.39 Aligned_cols=530 Identities=25% Similarity=0.334 Sum_probs=456.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++|+|.+++++++++.++..++.+.++|+++.+++|.++.|.+++|+|+| ++++|+++
T Consensus 39 ~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg----------~~~~I~~~ 108 (755)
T TIGR01647 39 SWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDG----------KWQEIPAS 108 (755)
T ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC----------EEEEEEhh
Confidence 56667888999999999999999999999988999999999999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
||+|||+|.|++||+|||||+|++|+ ..||||+|||||.|+.|.+|+.+|+||.+.+|.++++|+++|.+|++|||.++
T Consensus 109 ~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~l 188 (755)
T TIGR01647 109 ELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAAL 188 (755)
T ss_pred hCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHH
Confidence 99999999999999999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.+++++.++++++++++++++++. .+....++..++..++++++++|||+|+++ |++++.
T Consensus 189 v~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 189 VQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVL------FFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 9999989999999999999999988877776654332 221123466789999999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHH-
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAM- 485 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~- 485 (750)
++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++++.++. .++++++.+++.+
T Consensus 263 g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~~~l~~a~~~~ 327 (755)
T TIGR01647 263 GAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG---------------FDKDDVLLYAALAS 327 (755)
T ss_pred HHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC---------------CCHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999765321 0255677777755
Q ss_pred hcCCCCchHHHHHhhhcCCC-----CCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-H
Q 004479 486 EKGTTHPIGRAVVDHSIGKD-----LPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-S 559 (750)
Q Consensus 486 e~~s~hP~~~Ai~~~~~~~~-----~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~ 559 (750)
+..+.||+++|+++++.+.+ ++.....+|++ .++++.+.+.+. .+++.+.++||+++.+.+.|+...+ .
T Consensus 328 ~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~-~~k~~~~~v~~~----~~g~~~~~~kGa~e~il~~c~~~~~~~ 402 (755)
T TIGR01647 328 REEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDP-VDKRTEATVEDP----ETGKRFKVTKGAPQVILDLCDNKKEIE 402 (755)
T ss_pred CCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCC-CCCeEEEEEEeC----CCceEEEEEeCChHHHHHhcCCcHHHH
Confidence 47889999999999875432 22222223332 366666666531 1356677899999999999975422 2
Q ss_pred HHHHHHh-cccCCCCcEEEEeecc-C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 560 RKIKEAV-NGSSYGRGFVHAALSV-N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 560 ~~~~~~~-~~~~~g~~~~~~~~~~-~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
+++.+.. .....|.+++.++... + ..+|+++|+||+|||++++|++||+ +|++++|+||||+.||+++|+++||
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCC
Confidence 2222222 1234566777766522 2 3599999999999999999999999 7999999999999999999999999
Q ss_pred ce------------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeC
Q 004479 635 NE------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 635 ~~------------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg 684 (750)
.+ +|||++|+||.++|+.||++ |++|+|+|||+||+|||++||||||||
T Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm~ 560 (755)
T TIGR01647 482 GTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAVA 560 (755)
T ss_pred CCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEec
Confidence 75 99999999999999999998 999999999999999999999999999
Q ss_pred CCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 685 QRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 685 ~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
+ |+|+|+++||++|++|||+.|++++++||++++||+||+.|.++.|+..++
T Consensus 561 ~-gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 561 G-ATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred C-CcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 5 999999999999999999999999999999999999999999998875443
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.5e-94 Score=860.62 Aligned_cols=537 Identities=21% Similarity=0.269 Sum_probs=449.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.++++++|++++|.+++++++++.++..++.++++|+++.+++|.++.|.+++|+|++..+ .+|++++|+++
T Consensus 106 ~~lL~~aa~ls~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~----~~g~~~~I~~~ 181 (902)
T PRK10517 106 NILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDK----GENGWLEIPID 181 (902)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccC----CCCeEEEEEHH
Confidence 55666888889999999999999999999999999999999999999999999999999985210 01278999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccCC-------------ccCCCceecceeEEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGD-------------RIPGGARNLDGRMILKATK 314 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~-------------~v~aGt~~~~G~~~v~v~~ 314 (750)
||+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|++
T Consensus 182 eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~a 261 (902)
T PRK10517 182 QLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIA 261 (902)
T ss_pred hCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEE
Confidence 999999999999999999999999975 99999999999999999885 5999999999999999999
Q ss_pred eccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhh
Q 004479 315 TWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASP 394 (750)
Q Consensus 315 ~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P 394 (750)
+|.+|.+|+|.+++++++.+++|+|+.++++++++.+++++++.+++++.. +.. .++..++..++++++++||
T Consensus 262 tG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~------~~~-~~~~~~l~~alsv~V~~~P 334 (902)
T PRK10517 262 TGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING------YTK-GDWWEAALFALSVAVGLTP 334 (902)
T ss_pred eccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH------Hhc-CCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999998887777665543321 111 2456678899999999999
Q ss_pred hhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCc
Q 004479 395 CALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPN 473 (750)
Q Consensus 395 ~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 473 (750)
|+||++ +++++.|..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++....+.
T Consensus 335 e~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~---------------- 398 (902)
T PRK10517 335 EMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK---------------- 398 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC----------------
Confidence 999997 999999999999999999999999999999999999999999999999987543222
Q ss_pred cHHHHHHHHHHH---hcCCCCchHHHHHhhhcCCC-C----CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCc
Q 004479 474 CEKEALAVAAAM---EKGTTHPIGRAVVDHSIGKD-L----PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGS 545 (750)
Q Consensus 474 ~~~~~l~~~a~~---e~~s~hP~~~Ai~~~~~~~~-~----~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs 545 (750)
..++++.+++.. +....||++.|++.++.... . ....+.+++|.+.++.++++... .++.++.+.||+
T Consensus 399 ~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~----~~~~~~~~~KGa 474 (902)
T PRK10517 399 TSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAE----NTEHHQLICKGA 474 (902)
T ss_pred CHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEE----CCCeEEEEEeCc
Confidence 145566655432 23467999999999875432 1 11223344555555555544321 144567899999
Q ss_pred hHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec---------------cCceEEEEEecCCCchh
Q 004479 546 VDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS---------------VNEKVTLIHLEDRPRPG 598 (750)
Q Consensus 546 ~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~---------------~~~~lG~i~~~D~lr~~ 598 (750)
+|.+.++|... +..+++.+.. .....|.+++.++.. +...+|+++|+||+|||
T Consensus 475 ~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~ 554 (902)
T PRK10517 475 LEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKET 554 (902)
T ss_pred hHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhh
Confidence 99999998642 1112222211 123456666665531 11349999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------------eEEecCCHhhHHHHHHHH
Q 004479 599 VSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------EVYCSLKPEDKLNHVKRT 653 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------~v~a~~~P~~K~~~V~~l 653 (750)
++++|++||+ +|++++|+||||+.||.+||+++||+ +||||++|+||.++|+.|
T Consensus 555 a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~L 633 (902)
T PRK10517 555 TAPALKALKA-SGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLL 633 (902)
T ss_pred HHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHH
Confidence 9999999999 79999999999999999999999997 799999999999999999
Q ss_pred HhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 654 SRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCII 733 (750)
Q Consensus 654 ~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~ 733 (750)
|++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+||++|||+.|++++++||++++||++++.|.++.|+
T Consensus 634 q~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~ 711 (902)
T PRK10517 634 KRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 711 (902)
T ss_pred HHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 998 999999999999999999999999999 599999999999999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 004479 734 LASLPS 739 (750)
Q Consensus 734 ~~~i~~ 739 (750)
..++..
T Consensus 712 ~~v~~~ 717 (902)
T PRK10517 712 GNVFSV 717 (902)
T ss_pred HHHHHH
Confidence 655443
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.1e-93 Score=855.89 Aligned_cols=528 Identities=20% Similarity=0.256 Sum_probs=444.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE------cCCCCCCCcCCCcE
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLN------VDDDNLPDVSDLAY 242 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r------~~~~~~~~~~~~~~ 242 (750)
..++.++++.+++.++|.+++++++++.++..++.+.++|+++++++|.++.+.+++|+| +| ++
T Consensus 72 ~~iL~~~a~ls~~~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg----------~~ 141 (867)
T TIGR01524 72 IYILAMLMGVSYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNG----------SM 141 (867)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCC----------eE
Confidence 445567888889999999999999999999999999999999999999999999999999 44 89
Q ss_pred EEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccCC-------------ccCCCceecceeE
Q 004479 243 RSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGD-------------RIPGGARNLDGRM 308 (750)
Q Consensus 243 ~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~-------------~v~aGt~~~~G~~ 308 (750)
++|+++||+|||+|.+++||+|||||+|++|+. .||||+|||||.|++|.+|+ .+|+||.+.+|.+
T Consensus 142 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~ 221 (867)
T TIGR01524 142 DEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHA 221 (867)
T ss_pred EEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEE
Confidence 999999999999999999999999999999985 99999999999999999875 5999999999999
Q ss_pred EEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHH
Q 004479 309 ILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGL 388 (750)
Q Consensus 309 ~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~v 388 (750)
+++|+++|.+|.+|||.+++++ +..++|+|+.++++++++.+++++++++++++ |.+.. .++..++..++++
T Consensus 222 ~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~------~~~~~-~~~~~~~~~al~l 293 (867)
T TIGR01524 222 QAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMI------NGLMK-GDWLEAFLFALAV 293 (867)
T ss_pred EEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheeh------HHHhc-CCHHHHHHHHHHH
Confidence 9999999999999999999988 77789999999999999988877776655332 21111 2456678999999
Q ss_pred HHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCcccc
Q 004479 389 MVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDI 467 (750)
Q Consensus 389 lv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~ 467 (750)
++++|||+|+++ |++++.+..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++.+..+..
T Consensus 294 ~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~--------- 364 (867)
T TIGR01524 294 AVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGET--------- 364 (867)
T ss_pred HHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCC---------
Confidence 999999999997 9999999999999999999999999999999999999999999999999986543321
Q ss_pred ccCCCccHHHHHHHHHH---HhcCCCCchHHHHHhhhcCCCC-----CCccccceeeecCCeEEE-EEeCeeeccCCCce
Q 004479 468 SCCIPNCEKEALAVAAA---MEKGTTHPIGRAVVDHSIGKDL-----PSVSIDRFEYFPGRGLTA-TVNGIESGTEGGKE 538 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~---~e~~s~hP~~~Ai~~~~~~~~~-----~~~~~~~~~~~~g~g~~~-~v~~~~~~~~~~~~ 538 (750)
.++++.+++. .+..+.||+++|+++++.+... ....+..+++.+.++.++ .+.+ .++.+
T Consensus 365 -------~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~-----~~~~~ 432 (867)
T TIGR01524 365 -------SERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVEN-----RAEVT 432 (867)
T ss_pred -------HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEc-----CCceE
Confidence 4556665542 2334679999999998754311 111233344444454444 4443 13356
Q ss_pred eeeccCchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec------------cC---ceEEEEEe
Q 004479 539 LKASLGSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS------------VN---EKVTLIHL 591 (750)
Q Consensus 539 ~~~~kGs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~------------~~---~~lG~i~~ 591 (750)
+.+.||+++.+.++|... +..+++.+.. .....|.+++.++.. .+ ..+|+++|
T Consensus 433 ~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l 512 (867)
T TIGR01524 433 RLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGF 512 (867)
T ss_pred EEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEe
Confidence 789999999999988642 1112222222 123456666666541 11 24999999
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------------eEEecCCHhhH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------EVYCSLKPEDK 646 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------~v~a~~~P~~K 646 (750)
+||+|||++++|++||+ +|++++|+||||+.||.+||+++||. +||||++|+||
T Consensus 513 ~Dp~R~~~~~aI~~l~~-aGI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 513 LDPPKESTKEAIAALFK-NGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred eCCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 99999999999999999 79999999999999999999999998 79999999999
Q ss_pred HHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004479 647 LNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVA 726 (750)
Q Consensus 647 ~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~ 726 (750)
.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+||++|||+.|++++++||++++||+||+.
T Consensus 592 ~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~ 669 (867)
T TIGR01524 592 SRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669 (867)
T ss_pred HHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 999999999999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 004479 727 LALSCIILASLP 738 (750)
Q Consensus 727 ~al~~~~~~~i~ 738 (750)
|.++.|+..++.
T Consensus 670 ~~ls~n~~~~~~ 681 (867)
T TIGR01524 670 MTASSNFGNVFS 681 (867)
T ss_pred HHHhhhHHHHHH
Confidence 999877655544
No 9
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.7e-94 Score=820.00 Aligned_cols=491 Identities=21% Similarity=0.300 Sum_probs=404.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceE-EEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEE
Q 004479 193 AMFNLAHIAEEFFTSRAMVDVKELKENYPD-SVL-VLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEV 270 (750)
Q Consensus 193 ~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~-v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~v 270 (750)
+...++.+.|.+.+.|+++++++|+++.|+ +++ |.|+| ++++|++++|+|||+|.|++||+||+||+|
T Consensus 74 ~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg----------~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~v 143 (673)
T PRK14010 74 LTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDG----------SYEMIDASDLKKGHIVRVATGEQIPNDGKV 143 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCC----------EEEEEEHHHcCCCCEEEECCCCcccCCeEE
Confidence 334568888999999999999999999986 786 56665 789999999999999999999999999999
Q ss_pred EeceeeeeeccccCCcceEeeccC---CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHh
Q 004479 271 YQGTATITIEHLTGEVKPLEAKVG---DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGE 347 (750)
Q Consensus 271 l~G~~~Vdes~LTGEs~pv~k~~g---~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~ 347 (750)
++|++.||||+|||||.|+.|++| +.||+||.|.+|.++++|+++|.+|.++||.+++++++.+|+|+|.....+..
T Consensus 144 ieG~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 144 IKGLATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred EEcceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 999999999999999999999999 88999999999999999999999999999999999999999999976555432
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHh
Q 004479 348 QYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDA 426 (750)
Q Consensus 348 ~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~ 426 (750)
.+. +.++++++. + +++.....+...+...+++++.+|||+|+.+ |++...|+.+++|+|+++|+++++|+
T Consensus 224 ~l~-----ii~l~~~~~--~--~~~~~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~ 294 (673)
T PRK14010 224 TLT-----IIFLVVILT--M--YPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVET 294 (673)
T ss_pred HHh-----HHHHHHHHH--H--HHHHhhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHH
Confidence 221 111111110 1 1010001223356677888888999999876 99999999999999999999999999
Q ss_pred hccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCC
Q 004479 427 LASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL 506 (750)
Q Consensus 427 lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~ 506 (750)
+|++|++|||||||||+|++.+.++.+.++.. .++++..++.++..+.||+++||++++++.++
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~----------------~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~ 358 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFIPVKSSS----------------FERLVKAAYESSIADDTPEGRSIVKLAYKQHI 358 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEEeCCCcc----------------HHHHHHHHHHhcCCCCChHHHHHHHHHHHcCC
Confidence 99999999999999999999888876654332 56688888888899999999999999876544
Q ss_pred CCc-cccc-eeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----hHHHHHHHHhcccCCCCcEEEEe
Q 004479 507 PSV-SIDR-FEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-----DESRKIKEAVNGSSYGRGFVHAA 579 (750)
Q Consensus 507 ~~~-~~~~-~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~ 579 (750)
... ...+ .++.+.++.+++..+ ++ .+.||+++++.+.|... .+.++..+.. ...|.+.++++
T Consensus 359 ~~~~~~~~~~pF~~~~k~~gv~~~-------g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~--a~~G~~~l~v~ 427 (673)
T PRK14010 359 DLPQEVGEYIPFTAETRMSGVKFT-------TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGV--SKKGGTPLVVL 427 (673)
T ss_pred CchhhhcceeccccccceeEEEEC-------CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHH--HhCCCeEEEEE
Confidence 321 1112 233344555554321 11 35699999999888632 1111111111 23455655554
Q ss_pred eccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCC
Q 004479 580 LSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 580 ~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
. +...+|+++++||+|||++++|++||+ +|++++|+||||+.||.+||+++||+++|||++||||.++|+.+|++ |+
T Consensus 428 ~-~~~~lG~i~l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~~PedK~~iV~~lQ~~-G~ 504 (673)
T PRK14010 428 E-DNEILGVIYLKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVIREEQAK-GH 504 (673)
T ss_pred E-CCEEEEEEEeecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCceEEcCCCHHHHHHHHHHHHhC-CC
Confidence 2 345699999999999999999999999 69999999999999999999999999999999999999999999998 99
Q ss_pred eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 660 GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCII 733 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~ 733 (750)
.|+|+|||+||||||++|||||||| +|||+|+|+||+||++|||+.|++++++||+++.|+++.+.|.++.|+
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~ 577 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDI 577 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccH
Confidence 9999999999999999999999999 599999999999999999999999999999999999999999997543
No 10
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.1e-93 Score=816.23 Aligned_cols=507 Identities=24% Similarity=0.338 Sum_probs=419.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccC
Q 004479 189 GLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPD-SVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVD 267 (750)
Q Consensus 189 ~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaD 267 (750)
.++++.+.++.++|.++++|+++.+++|.++.|+ +++|+|+++ ++++|++++|++||+|.|++||+||+|
T Consensus 70 ~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~---------~~~~V~~~eL~~GDiV~v~~Gd~IPaD 140 (679)
T PRK01122 70 LWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPG---------AAEEVPATELRKGDIVLVEAGEIIPAD 140 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCC---------EEEEEEHHHcCCCCEEEEcCCCEEEEE
Confidence 4455556678999999999999999999999886 699998762 389999999999999999999999999
Q ss_pred cEEEeceeeeeeccccCCcceEeeccCCc---cCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHH
Q 004479 268 CEVYQGTATITIEHLTGEVKPLEAKVGDR---IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDE 344 (750)
Q Consensus 268 g~vl~G~~~Vdes~LTGEs~pv~k~~g~~---v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~ 344 (750)
|+|++|.+.||||+|||||.|+.|++|+. ||+||.|.+|.+.++|+++|.+|.++||.+++++++.+|+|+|...+.
T Consensus 141 G~vieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~ 220 (679)
T PRK01122 141 GEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTI 220 (679)
T ss_pred EEEEEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHH
Confidence 99999999999999999999999999998 999999999999999999999999999999999999999999998888
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchH
Q 004479 345 FGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQV 423 (750)
Q Consensus 345 ~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~ 423 (750)
+..+++.+.++..+.+.. +.|+ .+. ..++..++++++++|||+|+.+ |.....++.+++|+|+++|++++
T Consensus 221 l~~~l~~i~l~~~~~~~~-----~~~~-~g~---~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~a 291 (679)
T PRK01122 221 LLAGLTIIFLLVVATLPP-----FAAY-SGG---ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRA 291 (679)
T ss_pred HHHhhhHHHHHHHHHHHH-----HHHH-hCc---hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchH
Confidence 877765543332222211 1121 121 1268889999999999999876 88888999999999999999999
Q ss_pred HHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcC
Q 004479 424 LDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIG 503 (750)
Q Consensus 424 lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~ 503 (750)
+|+||++|++|||||||||+|+|+++++++.++.+ +++++..++.++..+.||.++||++++.+
T Consensus 292 vE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~----------------~~~ll~~a~~~s~~s~hP~~~AIv~~a~~ 355 (679)
T PRK01122 292 VEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVT----------------EEELADAAQLSSLADETPEGRSIVVLAKQ 355 (679)
T ss_pred HHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCC----------------HHHHHHHHHHhcCCCCCchHHHHHHHHHh
Confidence 99999999999999999999999999998765532 66788889999999999999999998865
Q ss_pred C-CCCCc-----cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh--hHHHHHHHHh-cccCCCCc
Q 004479 504 K-DLPSV-----SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE--DESRKIKEAV-NGSSYGRG 574 (750)
Q Consensus 504 ~-~~~~~-----~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~--~~~~~~~~~~-~~~~~g~~ 574 (750)
. +.+.. ....+++.+.+|++++... + ..+.||+++.+.+.|... ...+++.+.. .....|.+
T Consensus 356 ~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~-------g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~ 426 (679)
T PRK01122 356 RFNLRERDLQSLHATFVPFSAQTRMSGVDLD-------G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGT 426 (679)
T ss_pred hcCCCchhhccccceeEeecCcCceEEEEEC-------C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCc
Confidence 2 32211 1223344445577765321 2 357899999998888431 1111222111 11234666
Q ss_pred EEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHH
Q 004479 575 FVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTS 654 (750)
Q Consensus 575 ~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~ 654 (750)
.++++. +...+|+++++|++|||++++|++||+ +|++++|+||||+.||.+||+++||+++|||++||||.++|+.+|
T Consensus 427 ~l~va~-~~~~lG~i~l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~~PedK~~iV~~lQ 504 (679)
T PRK01122 427 PLVVAE-DNRVLGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAGVDDFLAEATPEDKLALIRQEQ 504 (679)
T ss_pred EEEEEE-CCeEEEEEEEeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHHHHHH
Confidence 666653 345699999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS---C 731 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~---~ 731 (750)
++ |+.|+|+|||+||+|||++|||||||| +|||+|+|+||++|++|||++|++++++||++.-+--.--.|++. .
T Consensus 505 ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~ 582 (679)
T PRK01122 505 AE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVA 582 (679)
T ss_pred Hc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHH
Confidence 98 999999999999999999999999999 599999999999999999999999999999998333333455554 3
Q ss_pred HHHHHHHHHhh
Q 004479 732 IILASLPSVLG 742 (750)
Q Consensus 732 ~~~~~i~~~~G 742 (750)
+.++++|+.|.
T Consensus 583 ~~~~i~p~~~~ 593 (679)
T PRK01122 583 KYFAIIPAMFA 593 (679)
T ss_pred HHHHHHHHHHH
Confidence 44567776554
No 11
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.7e-93 Score=848.72 Aligned_cols=533 Identities=20% Similarity=0.264 Sum_probs=441.1
Q ss_pred HHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcC
Q 004479 170 VLMAFAAFASIFMG-----------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVS 238 (750)
Q Consensus 170 ~L~~la~~~a~~~g-----------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~ 238 (750)
.++.++++.+++++ +|.+++++++++.++..++.++++|+++++++|.++.|.+++|+|+|..+ .
T Consensus 85 ~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~----~ 160 (903)
T PRK15122 85 YVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAG----A 160 (903)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccC----C
Confidence 44446666777764 46688888888889999999999999999999999999999999985100 0
Q ss_pred CCcEEEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc-----------------------C
Q 004479 239 DLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV-----------------------G 294 (750)
Q Consensus 239 ~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~-----------------------g 294 (750)
+|++++|+++||+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+ +
T Consensus 161 ~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (903)
T PRK15122 161 EPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLP 240 (903)
T ss_pred CCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCccccc
Confidence 1278999999999999999999999999999999986 899999999999999985 2
Q ss_pred CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 004479 295 DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIG 374 (750)
Q Consensus 295 ~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~ 374 (750)
+.+|+||.+.+|.++++|+++|.+|.+|||.+++++ ...++|+|+.++++++++..+.+.++.+++++..+ .
T Consensus 241 n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~------~- 312 (903)
T PRK15122 241 NICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF------T- 312 (903)
T ss_pred ceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------c-
Confidence 579999999999999999999999999999999988 55678999999999998877665555444332211 1
Q ss_pred cchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEe
Q 004479 375 TSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEP 453 (750)
Q Consensus 375 ~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~ 453 (750)
..++..++..++++++++|||+|+++ |++++.+..+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++++
T Consensus 313 ~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~ 392 (903)
T PRK15122 313 KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD 392 (903)
T ss_pred cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc
Confidence 12456678899999999999999997 99999999999999999999999999999999999999999999999999875
Q ss_pred cCCcccccCCccccccCCCccHHHHHHHHHH---HhcCCCCchHHHHHhhhcCCCCC-----CccccceeeecCCeEEEE
Q 004479 454 IYGHWIRSKKTHDISCCIPNCEKEALAVAAA---MEKGTTHPIGRAVVDHSIGKDLP-----SVSIDRFEYFPGRGLTAT 525 (750)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~---~e~~s~hP~~~Ai~~~~~~~~~~-----~~~~~~~~~~~g~g~~~~ 525 (750)
.++.. +++++.+++. .+..+.||+++|+++++...+.. ...+.++.+.+.++.+++
T Consensus 393 ~~~~~----------------~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~ 456 (903)
T PRK15122 393 VSGRK----------------DERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSV 456 (903)
T ss_pred CCCCC----------------hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEE
Confidence 44321 3455665542 23456799999999998654321 223445556666777766
Q ss_pred EeCeeeccCCCceeeeccCchHHHhhhccChh-----------HHHHHHHHh-cccCCCCcEEEEeec------------
Q 004479 526 VNGIESGTEGGKELKASLGSVDFITSLCKSED-----------ESRKIKEAV-NGSSYGRGFVHAALS------------ 581 (750)
Q Consensus 526 v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~-----------~~~~~~~~~-~~~~~g~~~~~~~~~------------ 581 (750)
+... .+++++.+.||++|.++++|.... ..+++.+.. .....|.+++.++..
T Consensus 457 v~~~----~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~ 532 (903)
T PRK15122 457 VVED----AQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYS 532 (903)
T ss_pred EEEc----CCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccc
Confidence 6432 145678899999999999986421 111222221 123456666665531
Q ss_pred --cC---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------
Q 004479 582 --VN---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--------------------- 635 (750)
Q Consensus 582 --~~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--------------------- 635 (750)
.+ ..+|+++++||+|||++++|++||+ +|++++|+||||+.||.+||+++||.
T Consensus 533 ~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~ 611 (903)
T PRK15122 533 TADERDLVIRGFLTFLDPPKESAAPAIAALRE-NGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALARE 611 (903)
T ss_pred cccccCcEEEEEEeccCccHHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHH
Confidence 11 3499999999999999999999999 79999999999999999999999997
Q ss_pred ----eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHH
Q 004479 636 ----EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 636 ----~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i 711 (750)
+||||++|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|||+|+++||+||++|||+.|++++
T Consensus 612 v~~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 612 VEERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred hhhCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 799999999999999999998 999999999999999999999999999 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 712 AKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 712 ~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
++||++++||++++.|.++.|+..++
T Consensus 690 ~~gR~i~~nI~k~i~~~ls~n~~~~~ 715 (903)
T PRK15122 690 IKGRETFGNIIKYLNMTASSNFGNVF 715 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999988765433
No 12
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.9e-91 Score=844.62 Aligned_cols=553 Identities=20% Similarity=0.276 Sum_probs=440.3
Q ss_pred HHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCceEEEEcCCCCC
Q 004479 169 HVLMAFAAFASIFMG-------------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKEN-YPDSVLVLNVDDDNL 234 (750)
Q Consensus 169 ~~L~~la~~~a~~~g-------------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~-~p~~~~v~r~~~~~~ 234 (750)
..++.++++.+++++ .|.+++++++++.+...+..+.+.++++.+++|.+. .+.+++|+|+|
T Consensus 99 ~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG---- 174 (941)
T TIGR01517 99 LILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGG---- 174 (941)
T ss_pred HHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECC----
Confidence 445556777777776 678887776666555566666777777777777653 46789999987
Q ss_pred CCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEec-eeeeeeccccCCcceEeeccCCc--cCCCceecceeEEEE
Q 004479 235 PDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQG-TATITIEHLTGEVKPLEAKVGDR--IPGGARNLDGRMILK 311 (750)
Q Consensus 235 ~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G-~~~Vdes~LTGEs~pv~k~~g~~--v~aGt~~~~G~~~v~ 311 (750)
++++|+++||+|||+|.|++||+|||||+|++| ++.||||+|||||.|+.|.+|+. +|+||.+.+|.++++
T Consensus 175 ------~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~i 248 (941)
T TIGR01517 175 ------QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRML 248 (941)
T ss_pred ------EEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEE
Confidence 899999999999999999999999999999999 78999999999999999999887 999999999999999
Q ss_pred EEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcc--cc-------cchhhhHH
Q 004479 312 ATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSF--IG-------TSVCRGSV 382 (750)
Q Consensus 312 v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~--~~-------~~~~~~~~ 382 (750)
|+++|.+|.+|||.+++++++ .++|+|+.++++++++.+++++++++++++..+.+.+.. .. ...+...+
T Consensus 249 V~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHF 327 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHH
Confidence 999999999999999998876 568999999999999999888877766554422111110 00 01345678
Q ss_pred HHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCccccc
Q 004479 383 YRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRS 461 (750)
Q Consensus 383 ~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~ 461 (750)
.+++++++++|||+|+++ |++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|++++...+. +..
T Consensus 328 ~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~-~~~ 406 (941)
T TIGR01517 328 IIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQR-FNV 406 (941)
T ss_pred HHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecce-Eec
Confidence 899999999999999997 999999999999999999999999999999999999999999999999998754321 111
Q ss_pred CCccccccCCCccHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCCC-------ccccceeeecCCe
Q 004479 462 KKTHDISCCIPNCEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLPS-------VSIDRFEYFPGRG 521 (750)
Q Consensus 462 ~~~~~~~~~~~~~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~~-------~~~~~~~~~~g~g 521 (750)
.+... ..+....+++..++.+.. ...+|++.|+++++...+.+. ..+..+++.+.++
T Consensus 407 ~~~~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k 483 (941)
T TIGR01517 407 RDVLR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERK 483 (941)
T ss_pred Ccccc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCC
Confidence 11000 000011223332222221 135688899999886433221 1234456666666
Q ss_pred EEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeecc-------
Q 004479 522 LTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALSV------- 582 (750)
Q Consensus 522 ~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~~------- 582 (750)
.++++... ++++++.++||+||.+.++|... +..+.+.+.. .....|.+++.++...
T Consensus 484 ~msvv~~~----~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~ 559 (941)
T TIGR01517 484 FMSVVVKH----SGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP 559 (941)
T ss_pred eEEEEEEe----CCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 66665432 24568899999999999998642 0112222221 1234465555544311
Q ss_pred -----C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-------------------
Q 004479 583 -----N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------------------- 635 (750)
Q Consensus 583 -----~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------------------- 635 (750)
+ ..+|+++++||+||+++++|++||+ +|++++|+||||+.||.++|++|||.
T Consensus 560 ~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~e 638 (941)
T TIGR01517 560 RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEE 638 (941)
T ss_pred cccccccCcEEEEEeeccCCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHH
Confidence 1 3489999999999999999999999 79999999999999999999999996
Q ss_pred --------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCH
Q 004479 636 --------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 636 --------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l 707 (750)
.||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||..|+|+|+++||++|++|+|+.|
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I 717 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASI 717 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHH
Confidence 699999999999999999998 99999999999999999999999999966999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 004479 708 PFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742 (750)
Q Consensus 708 ~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G 742 (750)
++++++||+++++|+||+.|++++|+..+++.++|
T Consensus 718 ~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~ 752 (941)
T TIGR01517 718 VRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVG 752 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998776665544
No 13
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=4.2e-91 Score=797.66 Aligned_cols=514 Identities=44% Similarity=0.668 Sum_probs=466.6
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEec
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPV 247 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~ 247 (750)
||+|+++++++++++|+|+++.++++++.++.+++.|.++|+++.+++|.++.|.+++|+|+| +++++++
T Consensus 1 ~~~l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g----------~~~~i~~ 70 (536)
T TIGR01512 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGG----------SLEEVAV 70 (536)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECC----------EEEEEEH
Confidence 589999999999999999999999999999999999999999999999999999999999987 7899999
Q ss_pred CCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 248 HDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 248 ~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|||.++
T Consensus 71 ~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~ 150 (536)
T TIGR01512 71 EELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNL 150 (536)
T ss_pred HHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.++++++++++++++++++++++. .+... +..++.+++++++++|||+|+++ |+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~ 222 (536)
T TIGR01512 151 VEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVP------GLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLS 222 (536)
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHH
Confidence 9999999999999999999999999888877664432 22111 12378899999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHh
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e 486 (750)
++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++.+ .+++.+++++|
T Consensus 223 ~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~----------------------~~~l~~a~~~e 280 (536)
T TIGR01512 223 AISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP----------------------AEVLRLAAAAE 280 (536)
T ss_pred HHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH----------------------HHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998853 36788999999
Q ss_pred cCCCCchHHHHHhhhcCCCCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHh
Q 004479 487 KGTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAV 566 (750)
Q Consensus 487 ~~s~hP~~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~ 566 (750)
+.+.||+++||++++.+.+ ...++++.+++|+.+.++|.+ +..|+++++.+....
T Consensus 281 ~~~~hp~~~Ai~~~~~~~~----~~~~~~~~~g~gi~~~~~g~~----------~~ig~~~~~~~~~~~----------- 335 (536)
T TIGR01512 281 QASSHPLARAIVDYARKRE----NVESVEEVPGEGVRAVVDGGE----------VRIGNPRSLEAAVGA----------- 335 (536)
T ss_pred ccCCCcHHHHHHHHHHhcC----CCcceEEecCCeEEEEECCeE----------EEEcCHHHHhhcCCc-----------
Confidence 9999999999999987654 456788899999999887642 457888877543211
Q ss_pred cccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCCc-EEEEecCCCHHHHHHHHHHcCCceEEecCCHhh
Q 004479 567 NGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARL-RVMMLTGDHESSAQRVANAVGINEVYCSLKPED 645 (750)
Q Consensus 567 ~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi-~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~ 645 (750)
.....+.+.++++. ++...|.+.++|++||+++++|++|++ .|+ +++|+|||++.+++++++++||+++|+++.|++
T Consensus 336 ~~~~~~~~~~~v~~-~~~~~g~i~~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~~ 413 (536)
T TIGR01512 336 RPESAGKTIVHVAR-DGTYLGYILLSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPED 413 (536)
T ss_pred chhhCCCeEEEEEE-CCEEEEEEEEeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcHH
Confidence 01123445555543 345699999999999999999999999 699 999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 004479 646 KLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNV 725 (750)
Q Consensus 646 K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni 725 (750)
|.++++.++++ ++.|+|+|||.||+||+++||+||++|..+++.++++||++++++++..+++++++||+++++++||+
T Consensus 414 K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 414 KLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 89999999999999999999999999955799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccc
Q 004479 726 ALALSCIILASLPSVLGFLPLWLT 749 (750)
Q Consensus 726 ~~al~~~~~~~i~~~~G~l~~~~a 749 (750)
.|+++||++++.++++|++|||+|
T Consensus 493 ~~a~~~n~~~i~~a~~G~~~p~~a 516 (536)
T TIGR01512 493 VIALGIILLLILLALFGVLPLWLA 516 (536)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHH
Confidence 999999999888899999999987
No 14
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.1e-90 Score=794.33 Aligned_cols=533 Identities=40% Similarity=0.610 Sum_probs=472.1
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEec
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPV 247 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~ 247 (750)
||+|++++++.+|++|.|.++.++++++.++.+++.+.++|+++.+++|.++.|.+++++|+++ ++++|+.
T Consensus 1 ~d~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g---------~~~~i~~ 71 (556)
T TIGR01525 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDG---------SEEEVPV 71 (556)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCC---------eEEEEEH
Confidence 6899999999999999999999999999999999999999999999999999999999999853 7899999
Q ss_pred CCcCCCCEEEEcCCCccccCcEEEeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHH
Q 004479 248 HDVEVGSYILVGAGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQL 327 (750)
Q Consensus 248 ~~l~~GDiI~v~~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~ 327 (750)
++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|++|+|.++
T Consensus 72 ~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 72 EELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred HHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHH
Q 004479 328 TEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYAT 406 (750)
Q Consensus 328 v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~ 406 (750)
+++++.+++|+|+.+++++++|++++++++++++++. .+.... ..+.+++++++++|||+|+++ |+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~------~~~~~~---~~~~~~~~vlv~~~P~al~l~~~~~~~~ 222 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVW------LALGAL---GALYRALAVLVVACPCALGLATPVAILV 222 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhccc---hHHHHHHHHHhhccccchhehhHHHHHH
Confidence 9999999999999999999999999888888775432 222111 578999999999999999997 999999
Q ss_pred HHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHh
Q 004479 407 AISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 407 ~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e 486 (750)
++.+++++||++|+++++|+|+++|++|||||||||+|+|+|.++.+.++.. ..+++++.+++++|
T Consensus 223 ~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------~~~~~~l~~a~~~e 288 (556)
T TIGR01525 223 AIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------ISEEELLALAAALE 288 (556)
T ss_pred HHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------ccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997654321 01567888999999
Q ss_pred cCCCCchHHHHHhhhcCCCCCCcccc-ceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHH-HHHHH
Q 004479 487 KGTTHPIGRAVVDHSIGKDLPSVSID-RFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDES-RKIKE 564 (750)
Q Consensus 487 ~~s~hP~~~Ai~~~~~~~~~~~~~~~-~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~-~~~~~ 564 (750)
+.+.||+++||++++++.+.+... . ++++.+++|+.+.++|. ..+.+|+++++...-...+.. ....
T Consensus 289 ~~~~hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~~~gi~~~~~g~---------~~~~lg~~~~~~~~~~~~~~~~~~~~- 357 (556)
T TIGR01525 289 QSSSHPLARAIVRYAKKRGLELPK-QEDVEEVPGKGVEATVDGQ---------EEVRIGNPRLLELAAEPISASPDLLN- 357 (556)
T ss_pred ccCCChHHHHHHHHHHhcCCCccc-ccCeeEecCCeEEEEECCe---------eEEEEecHHHHhhcCCCchhhHHHHH-
Confidence 999999999999999766544322 3 67888999999988762 125678888872111111111 1111
Q ss_pred HhcccCCCCcEEEEeeccCceEEEEEecCCCchhHHHHHHHHHhcCC-cEEEEecCCCHHHHHHHHHHcCCceEEecCCH
Q 004479 565 AVNGSSYGRGFVHAALSVNEKVTLIHLEDRPRPGVSDVIAELKDHAR-LRVMMLTGDHESSAQRVANAVGINEVYCSLKP 643 (750)
Q Consensus 565 ~~~~~~~g~~~~~~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~ag-i~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P 643 (750)
.....|.+.++++. ++..+|.+.++|++||+++++|++|++ .| ++++|+|||+..++.++++++||+++|+++.|
T Consensus 358 --~~~~~g~~~~~v~~-~~~~~g~i~~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p 433 (556)
T TIGR01525 358 --EGESQGKTVVFVAV-DGELLGVIALRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP 433 (556)
T ss_pred --HHhhCCcEEEEEEE-CCEEEEEEEecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH
Confidence 11234566666654 345699999999999999999999999 58 99999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 004479 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQ 723 (750)
Q Consensus 644 ~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ 723 (750)
++|.++++.+++. ++.|+|+|||.||+||+++||||+++|. +++.+++.||+++.+++++.+++++++||+++++|+|
T Consensus 434 ~~K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 8899999999999999999999999994 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc-cc
Q 004479 724 NVALALSCIILASLPSVLGFLPLW-LT 749 (750)
Q Consensus 724 ni~~al~~~~~~~i~~~~G~l~~~-~a 749 (750)
|+.|+++||++.++++++|++||| +|
T Consensus 512 nl~~a~~~N~~~i~~a~~g~~~p~~~a 538 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAGGLLPLWLLA 538 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 999999999998888899999997 54
No 15
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-91 Score=773.11 Aligned_cols=566 Identities=23% Similarity=0.271 Sum_probs=456.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
-.++.++++.||.+.+|.|+..|.+++.+...+..++++|+.+++++|+++.|+.++|+|+| +.+.+++.
T Consensus 62 i~iLL~sA~ISfvl~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~g----------k~~~i~A~ 131 (972)
T KOG0202|consen 62 ILILLLSAAISFVLADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSG----------KLQHILAR 131 (972)
T ss_pred HHHHHHHHHHHHHHHhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecC----------cccceehh
Confidence 56667889999999999999887777777667777889999999999999999999999988 78999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeeccC--------------CccCCCceecceeEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKVG--------------DRIPGGARNLDGRMILKAT 313 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g--------------~~v~aGt~~~~G~~~v~v~ 313 (750)
||+|||+|.++-||+||||.++++-.. .+|||+|||||.|+.|... +.+|+||.+..|.++..|+
T Consensus 132 eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi 211 (972)
T KOG0202|consen 132 ELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVI 211 (972)
T ss_pred ccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEE
Confidence 999999999999999999999998876 8999999999999999532 2379999999999999999
Q ss_pred EeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc---chhhhHHHHHHHHHH
Q 004479 314 KTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT---SVCRGSVYRALGLMV 390 (750)
Q Consensus 314 ~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~---~~~~~~~~~al~vlv 390 (750)
.||.+|.+|+|.+.+++.+..|+|+|+.+|+|+++++.++.++.+.+.++..-+|.++..+. ..+...|..++++.|
T Consensus 212 ~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAV 291 (972)
T KOG0202|consen 212 GTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAV 291 (972)
T ss_pred eccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998777777776665222233333222 234566788999999
Q ss_pred hhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCC------
Q 004479 391 AASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKK------ 463 (750)
Q Consensus 391 ~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~------ 463 (750)
+++|++||++ +++++.|..||+|++++||...++|+||.+++||+|||||||+|+|.+++++..++.......
T Consensus 292 AAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ 371 (972)
T KOG0202|consen 292 AAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGT 371 (972)
T ss_pred HhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCc
Confidence 9999999986 999999999999999999999999999999999999999999999999999876543322210
Q ss_pred -cc-------cc-----ccCCCccHHHHHHHHHHH-----hcC-------CCCchHHHHHhhhcCCCCCCc---------
Q 004479 464 -TH-------DI-----SCCIPNCEKEALAVAAAM-----EKG-------TTHPIGRAVVDHSIGKDLPSV--------- 509 (750)
Q Consensus 464 -~~-------~~-----~~~~~~~~~~~l~~~a~~-----e~~-------s~hP~~~Ai~~~~~~~~~~~~--------- 509 (750)
++ +. .+....+-.+++..++-+ ++. -..|.+-|+...+.+-+++..
T Consensus 372 ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~ 451 (972)
T KOG0202|consen 372 TYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE 451 (972)
T ss_pred eeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc
Confidence 00 00 000111112233333222 211 346999999887754433221
Q ss_pred -------------cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-------------hHHHHHH
Q 004479 510 -------------SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE-------------DESRKIK 563 (750)
Q Consensus 510 -------------~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~-------------~~~~~~~ 563 (750)
.+.+++|.+.|+.|+++-.... ++..+..|.||++|.++++|+.. ...+.+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~--~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAH--GQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCC--CCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 2356788888998888754332 23446778999999999999542 1122222
Q ss_pred HHh-cccCCCCcEEEEeec-----------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecC
Q 004479 564 EAV-NGSSYGRGFVHAALS-----------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTG 619 (750)
Q Consensus 564 ~~~-~~~~~g~~~~~~~~~-----------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTG 619 (750)
+.. +....|.++...+.. +-.++|++++.||+|++++++|+.|++ +||+|+|+||
T Consensus 530 ~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~-aGIrV~mITG 608 (972)
T KOG0202|consen 530 ANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQ-AGIRVIMITG 608 (972)
T ss_pred HHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHH-cCCEEEEEcC
Confidence 222 223344444433322 112389999999999999999999999 8999999999
Q ss_pred CCHHHHHHHHHHcCCc-------------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCc
Q 004479 620 DHESSAQRVANAVGIN-------------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGI 668 (750)
Q Consensus 620 D~~~tA~~iA~~~GI~-------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~ 668 (750)
||++||.+||+++||. .+|+|++|++|.++|+.||++ |+.|||+|||+
T Consensus 609 D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGV 687 (972)
T KOG0202|consen 609 DNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGV 687 (972)
T ss_pred CCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCc
Confidence 9999999999999995 299999999999999999998 99999999999
Q ss_pred cCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcc
Q 004479 669 NDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLP----SVLGFL 744 (750)
Q Consensus 669 NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~----~~~G~l 744 (750)
|||||||.||||||||.+|||+|+++||+||.||||++|..++++||.+|+||||++.|.++.|+...+. +++|+-
T Consensus 688 NDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p 767 (972)
T KOG0202|consen 688 NDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIP 767 (972)
T ss_pred cchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999889999999999999999999999999999999999999999999988766544 455654
Q ss_pred cccc
Q 004479 745 PLWL 748 (750)
Q Consensus 745 ~~~~ 748 (750)
.|..
T Consensus 768 ~pL~ 771 (972)
T KOG0202|consen 768 EPLI 771 (972)
T ss_pred Cccc
Confidence 4443
No 16
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.5e-90 Score=828.07 Aligned_cols=548 Identities=21% Similarity=0.284 Sum_probs=449.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++|+|.+++.+++++.+...+..+.++|+++.+++|.++.|.+++|+|+| ++++|+++
T Consensus 64 ~~~L~~aa~ls~~~g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg----------~~~~I~~~ 133 (884)
T TIGR01522 64 ILLLIASAVISVFMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREG----------KLEHVLAS 133 (884)
T ss_pred HHHHHHHHHHHHHHcchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC----------EEEEEEHH
Confidence 55566788889999999999887766666666777788899999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccCC--------------ccCCCceecceeEEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGD--------------RIPGGARNLDGRMILKAT 313 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~--------------~v~aGt~~~~G~~~v~v~ 313 (750)
||+|||+|.+++||+|||||+|++|+ ..||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|+
T Consensus 134 eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~ 213 (884)
T TIGR01522 134 TLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVV 213 (884)
T ss_pred HCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEE
Confidence 99999999999999999999999996 799999999999999999874 699999999999999999
Q ss_pred EeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhh
Q 004479 314 KTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAAS 393 (750)
Q Consensus 314 ~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~ 393 (750)
++|.+|.+|+|.+++++++..++|+|+.++++++++.+++++++++++++. |. . ..++...+..++++++++|
T Consensus 214 ~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~~~v~llv~ai 286 (884)
T TIGR01522 214 GTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG-----WF-Q-GKDWLEMFTISVSLAVAAI 286 (884)
T ss_pred EecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-h-cCCHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999887665554443332 21 1 1245678899999999999
Q ss_pred hhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccC--Ccc-----
Q 004479 394 PCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSK--KTH----- 465 (750)
Q Consensus 394 P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~--~~~----- 465 (750)
||+|+++ |++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..++...... ...
T Consensus 287 P~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~ 366 (884)
T TIGR01522 287 PEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEV 366 (884)
T ss_pred cchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcc
Confidence 9999997 99999999999999999999999999999999999999999999999999986543211000 000
Q ss_pred --cc---ccCCCccHHHHHHHHHHHhcC---------CCCchHHHHHhhhcCCCCC-----CccccceeeecCCeEEEEE
Q 004479 466 --DI---SCCIPNCEKEALAVAAAMEKG---------TTHPIGRAVVDHSIGKDLP-----SVSIDRFEYFPGRGLTATV 526 (750)
Q Consensus 466 --~~---~~~~~~~~~~~l~~~a~~e~~---------s~hP~~~Ai~~~~~~~~~~-----~~~~~~~~~~~g~g~~~~v 526 (750)
+. ....+....+++..++.+... ..||+++|+++++.+.+.+ ...+..+++.+.+++++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~ 446 (884)
T TIGR01522 367 IVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVK 446 (884)
T ss_pred cccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEE
Confidence 00 000000123445444433321 1359999999998654432 2234566667777777765
Q ss_pred eCeeeccCCCceeeeccCchHHHhhhccChh------------HHHHHHHHh-cccCCCCcEEEEeeccC----ceEEEE
Q 004479 527 NGIESGTEGGKELKASLGSVDFITSLCKSED------------ESRKIKEAV-NGSSYGRGFVHAALSVN----EKVTLI 589 (750)
Q Consensus 527 ~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~------------~~~~~~~~~-~~~~~g~~~~~~~~~~~----~~lG~i 589 (750)
.... .+++++.+.||+||.++..|.... ..+++.+.. .....|.+++.++.... ..+|++
T Consensus 447 ~~~~---~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli 523 (884)
T TIGR01522 447 CVHR---QDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLV 523 (884)
T ss_pred EEEc---CCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEE
Confidence 4321 245678899999999999986421 112222221 12345667666654321 359999
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------------eEEecCC
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN---------------------------EVYCSLK 642 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~---------------------------~v~a~~~ 642 (750)
+++||+|||++++|++||+ +|++++|+|||++.||.++|+++||. .||||++
T Consensus 524 ~l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~ 602 (884)
T TIGR01522 524 GINDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS 602 (884)
T ss_pred eccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC
Confidence 9999999999999999999 79999999999999999999999997 5999999
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHH
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVK 722 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~ 722 (750)
|+||.++|+.+|++ |++|+|||||+||+|||++|||||+||..|+|+|+++||++|++|||+.+++++++||+++++|+
T Consensus 603 P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~ 681 (884)
T TIGR01522 603 PEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIK 681 (884)
T ss_pred HHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 99999999999999999999999999966999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 004479 723 QNVALALSCIILASLP 738 (750)
Q Consensus 723 ~ni~~al~~~~~~~i~ 738 (750)
+|+.|.++.|+..+++
T Consensus 682 k~i~~~l~~ni~~~~~ 697 (884)
T TIGR01522 682 NFITFQLSTSVAALSL 697 (884)
T ss_pred HHHHHHhhhhHHHHHH
Confidence 9999999998776644
No 17
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-92 Score=776.16 Aligned_cols=616 Identities=19% Similarity=0.245 Sum_probs=480.7
Q ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH---HHHHhccccCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHC
Q 004479 87 KAVIKFAKATRWLDLANFLREHLQLCCCAAALF---LAAAACPYLLPKPAIKPLQNAFLAVAFPLVGVSASLDALTDIAG 163 (750)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~ 163 (750)
+++..+-..+|.+++.+.++++...++.+-+-- --..+..+.+|.+..+.+ |.|+++|++++.
T Consensus 92 ~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F-------------l~fvweA~qD~T- 157 (1034)
T KOG0204|consen 92 HDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF-------------LRFVWEALQDVT- 157 (1034)
T ss_pred cchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH-------------HHHHHHHhccch-
Confidence 334444455899999999998877766542221 122466777665555543 567888888764
Q ss_pred CCCChHHHHHHHHHHHHHHhh--------hHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCC
Q 004479 164 GKVNIHVLMAFAAFASIFMGN--------SLEGGLLLAMF---NLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDD 232 (750)
Q Consensus 164 ~~~~~~~L~~la~~~a~~~g~--------~~~~~~i~~~~---~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~ 232 (750)
-+++.+|++.++.+|. |++|+.|++.+ .+..++.+|.++++.+.+++.+ ...+..|+|+|
T Consensus 158 -----LiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k--~~~k~~ViR~G-- 228 (1034)
T KOG0204|consen 158 -----LIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEK--RNIKFQVIRGG-- 228 (1034)
T ss_pred -----HHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhh--hceEEEEEECC--
Confidence 4555688888888874 66776655433 2457789999999988888443 45678899987
Q ss_pred CCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc--CCccCCCceecceeEE
Q 004479 233 NLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV--GDRIPGGARNLDGRMI 309 (750)
Q Consensus 233 ~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~--g~~v~aGt~~~~G~~~ 309 (750)
+.++|++.||+|||++.++.||.|||||++++|+. .+|||+|||||.++.|.+ ++++++||.+++|+++
T Consensus 229 --------~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgk 300 (1034)
T KOG0204|consen 229 --------RRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGK 300 (1034)
T ss_pred --------EEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcce
Confidence 89999999999999999999999999999999965 999999999999999987 5689999999999999
Q ss_pred EEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccc--c------c-----c
Q 004479 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFI--G------T-----S 376 (750)
Q Consensus 310 v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~--~------~-----~ 376 (750)
+.||.+|.+|..|+++.++.+...+++|+|-.+++++..+..+.+.+|++++++....+..... + . .
T Consensus 301 MlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~ 380 (1034)
T KOG0204|consen 301 MLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQ 380 (1034)
T ss_pred EEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHH
Confidence 9999999999999999999999989999999999999999999999888887664333221100 0 0 1
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecC
Q 004479 377 VCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIY 455 (750)
Q Consensus 377 ~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~ 455 (750)
.+...|..+++++|+|+|++||+| ++++++++++|.+.+.|+|..++||+||++++||.|||||||+|+|+|.+.+...
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~ 460 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGS 460 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecc
Confidence 233456677889999999999998 9999999999999999999999999999999999999999999999999987643
Q ss_pred CcccccCCccccccCCCccHHHHHHHHHHH---------------hcCCCCchHHHHHhhhcCCCCCCcc-------ccc
Q 004479 456 GHWIRSKKTHDISCCIPNCEKEALAVAAAM---------------EKGTTHPIGRAVVDHSIGKDLPSVS-------IDR 513 (750)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~---------------e~~s~hP~~~Ai~~~~~~~~~~~~~-------~~~ 513 (750)
.+...... .. .. .+..-.+++-..-+. .+.+.+|.++||+.+....+.+... ..-
T Consensus 461 ~~~k~~~~-~~-~~-l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv 537 (1034)
T KOG0204|consen 461 EHYKVNSP-KS-SN-LPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKV 537 (1034)
T ss_pred ccccccCc-cc-cc-CCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEE
Confidence 32211111 10 01 111122222222221 2335689999999988554432221 223
Q ss_pred eeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh------------hHHHHHHHHhc-ccCCCCcEEEEee
Q 004479 514 FEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE------------DESRKIKEAVN-GSSYGRGFVHAAL 580 (750)
Q Consensus 514 ~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~------------~~~~~~~~~~~-~~~~g~~~~~~~~ 580 (750)
+.|.+.|+.++++-... ++..+.|+||++|.++..|... +....+++.++ ....+.+.++++.
T Consensus 538 ~~FNS~kK~~gvvi~~~----~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy 613 (1034)
T KOG0204|consen 538 YPFNSVKKRMGVVIKLP----DGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAY 613 (1034)
T ss_pred eccCcccceeeEEEEcC----CCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEe
Confidence 45556666666654322 3331389999999999999752 11122222221 1233444444443
Q ss_pred cc------C------------c--eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-----
Q 004479 581 SV------N------------E--KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----- 635 (750)
Q Consensus 581 ~~------~------------~--~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----- 635 (750)
.+ + + .+|+++++||+|||++++|+.|++ ||++|.|+||||..||++||.+|||.
T Consensus 614 ~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~-AGItVRMVTGDNI~TAkAIA~eCGILt~~~d 692 (1034)
T KOG0204|consen 614 RDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR-AGITVRMVTGDNINTAKAIARECGILTPGGD 692 (1034)
T ss_pred eccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH-cCcEEEEEeCCcHHHHHHHHHHcccccCCCc
Confidence 11 1 0 189999999999999999999998 89999999999999999999999995
Q ss_pred ------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHH
Q 004479 636 ------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATA 691 (750)
Q Consensus 636 ------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A 691 (750)
+|+||.+|.||.-+|+.|+++ |++||.+|||+||+|||++||||+|||..||++|
T Consensus 693 ~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 693 FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 399999999999999999988 9999999999999999999999999999999999
Q ss_pred HhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 004479 692 IAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLG 742 (750)
Q Consensus 692 ~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G 742 (750)
+|+|||||+||||++|+++++|||..|.+|+++++|.++.|+.+.+..+.|
T Consensus 772 KEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~ 822 (1034)
T KOG0204|consen 772 KEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVS 822 (1034)
T ss_pred hhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhh
Confidence 999999999999999999999999999999999999999998877766655
No 18
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.7e-89 Score=779.17 Aligned_cols=505 Identities=23% Similarity=0.329 Sum_probs=415.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 191 LLAMFNLAHIAEEFFTSRAMVDVKELKENYPDS-VLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 191 i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~-~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++.+.++.++|.+.++|+++.+++|.++.|++ ++|+|+++ ++++|++++|++||+|.|++||+||+||+
T Consensus 73 l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg---------~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~ 143 (675)
T TIGR01497 73 LFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDG---------AIDKVPADQLKKGDIVLVEAGDVIPCDGE 143 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCC---------EEEEEEHHHCCCCCEEEECCCCEEeeeEE
Confidence 344456789999999999999999999998874 88886332 78999999999999999999999999999
Q ss_pred EEeceeeeeeccccCCcceEeeccCCc---cCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 004479 270 VYQGTATITIEHLTGEVKPLEAKVGDR---IPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG 346 (750)
Q Consensus 270 vl~G~~~Vdes~LTGEs~pv~k~~g~~---v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a 346 (750)
|++|++.||||+|||||.||.|++|+. ||+||.|.+|.+.++|+++|.+|.++||.+++++++.+|+|+|...+.+.
T Consensus 144 vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~ 223 (675)
T TIGR01497 144 VIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILL 223 (675)
T ss_pred EEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 999999999999999999999999985 99999999999999999999999999999999999999999998888776
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHH
Q 004479 347 EQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLD 425 (750)
Q Consensus 347 ~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE 425 (750)
.++..+.++..+ ++ +. |..+.. ...++..++++++++|||+|+.. |.....++.+++|+|+++|+++++|
T Consensus 224 ~~l~~v~li~~~---~~---~~-~~~~~~--~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE 294 (675)
T TIGR01497 224 IALTLVFLLVTA---TL---WP-FAAYGG--NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVE 294 (675)
T ss_pred HHHHHHHHHHHH---HH---HH-HHHhcC--hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHH
Confidence 554433222211 11 11 111111 12257778999999999999765 6666789999999999999999999
Q ss_pred hhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCC
Q 004479 426 ALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKD 505 (750)
Q Consensus 426 ~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~ 505 (750)
+||++|++|||||||||+|+|+++++++.++.+ .++++.+++.++..++||.++|+++++.+.+
T Consensus 295 ~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~----------------~~~ll~~aa~~~~~s~hP~a~Aiv~~a~~~~ 358 (675)
T TIGR01497 295 ACGDVDTLLLDKTGTITLGNRLASEFIPAQGVD----------------EKTLADAAQLASLADDTPEGKSIVILAKQLG 358 (675)
T ss_pred HhhCCCEEEECCCCcccCCCeEEEEEEecCCCc----------------HHHHHHHHHHhcCCCCCcHHHHHHHHHHHcC
Confidence 999999999999999999999999998754432 6778899999999999999999999886554
Q ss_pred CCCc----cccceeeecCC-eEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh--HHHHHHHHh-cccCCCCcEEE
Q 004479 506 LPSV----SIDRFEYFPGR-GLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED--ESRKIKEAV-NGSSYGRGFVH 577 (750)
Q Consensus 506 ~~~~----~~~~~~~~~g~-g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~--~~~~~~~~~-~~~~~g~~~~~ 577 (750)
.... ...++..++++ |++++... ++ ..+.||+++.+.+.|.... ....+.+.. .....|.+.++
T Consensus 359 ~~~~~~~~~~~~~~pf~~~~~~sg~~~~------~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 359 IREDDVQSLHATFVEFTAQTRMSGINLD------NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred CCccccccccceEEEEcCCCcEEEEEEe------CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEE
Confidence 3221 12234444444 67665321 12 3578999999987664211 011111111 11234666666
Q ss_pred EeeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhc
Q 004479 578 AALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM 657 (750)
Q Consensus 578 ~~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~ 657 (750)
++. ++..+|+++++|++|||++++|++||+ +|++++|+||||+.+|.++|+++||+++|||++|+||.++|+.+|++
T Consensus 431 va~-~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~- 507 (675)
T TIGR01497 431 VCE-DNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALIRQEQAE- 507 (675)
T ss_pred EEE-CCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHc-
Confidence 654 346799999999999999999999999 69999999999999999999999999999999999999999999998
Q ss_pred CCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 004479 658 GGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS---CIIL 734 (750)
Q Consensus 658 g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~---~~~~ 734 (750)
|+.|+|+|||+||+|||++||||||||. |+++|+++||++|++|||++|++++++||+++-+...-..|+++ .+.+
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm~~-gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeCC-CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 9999999999999999999999999995 89999999999999999999999999999999888877777775 3445
Q ss_pred HHHHHHh
Q 004479 735 ASLPSVL 741 (750)
Q Consensus 735 ~~i~~~~ 741 (750)
+++|+.|
T Consensus 587 ~~~~~~~ 593 (675)
T TIGR01497 587 AIIPAIF 593 (675)
T ss_pred HHHHHHH
Confidence 6677544
No 19
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-88 Score=808.93 Aligned_cols=543 Identities=27% Similarity=0.353 Sum_probs=443.3
Q ss_pred HHHHHHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEE
Q 004479 169 HVLMAFAAFASIFMGNSL----EGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRS 244 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~----~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~ 244 (750)
..++.+++..+++.+.|. ++..+.+++.+...+..+++.|+.+.+++|++..+.+++|+|+| ++++
T Consensus 83 ~~iL~~~a~~s~~~~~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g----------~~~~ 152 (917)
T COG0474 83 IILLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDG----------KFVE 152 (917)
T ss_pred HHHHHHHHHHHHHhhcccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCC----------cEEE
Confidence 455567778888888873 44466666666667777888888888999999899999999977 8999
Q ss_pred EecCCcCCCCEEEEcCCCccccCcEEEecee-eeeeccccCCcceEeecc--------------CCccCCCceecceeEE
Q 004479 245 VPVHDVEVGSYILVGAGEAVPVDCEVYQGTA-TITIEHLTGEVKPLEAKV--------------GDRIPGGARNLDGRMI 309 (750)
Q Consensus 245 V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~--------------g~~v~aGt~~~~G~~~ 309 (750)
|+++||+|||+|.+++||+||||++|+++++ .||||+|||||.|++|.+ .+.+|+||.+.+|.+.
T Consensus 153 i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~ 232 (917)
T COG0474 153 IPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAK 232 (917)
T ss_pred ecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEE
Confidence 9999999999999999999999999999998 999999999999999974 3567999999999999
Q ss_pred EEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHH
Q 004479 310 LKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLM 389 (750)
Q Consensus 310 v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vl 389 (750)
+.|++||.+|..|++..++......++|+|+.+++++.++..+.++++++++++..+ .+...+...+.++++++
T Consensus 233 giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~v~l~ 306 (917)
T COG0474 233 GIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF------RGGNGLLESFLTALALA 306 (917)
T ss_pred EEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCccHHHHHHHHHHHH
Confidence 999999999999999999999877789999999999999999988888887665521 11112567899999999
Q ss_pred HhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecC-CcccccCCcccc
Q 004479 390 VAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIY-GHWIRSKKTHDI 467 (750)
Q Consensus 390 v~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~-~~~~~~~~~~~~ 467 (750)
+.++|++|++. .++++.+..+|+++++++|+++++|+||++|+||+|||||||+|+|+|.+++..+ +.... . .
T Consensus 307 va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~----~ 381 (917)
T COG0474 307 VAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-D----K 381 (917)
T ss_pred HhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-c----c
Confidence 99999999986 9999999999999999999999999999999999999999999999999998774 22211 0 0
Q ss_pred ccCCCccHHHHHHHHHHH---hcC------CCCchHHHHHhhhcCCCC--CC-------ccccceeeecCCeEEEEEeCe
Q 004479 468 SCCIPNCEKEALAVAAAM---EKG------TTHPIGRAVVDHSIGKDL--PS-------VSIDRFEYFPGRGLTATVNGI 529 (750)
Q Consensus 468 ~~~~~~~~~~~l~~~a~~---e~~------s~hP~~~Ai~~~~~~~~~--~~-------~~~~~~~~~~g~g~~~~v~~~ 529 (750)
....+....+.+..++.+ ... ..+|++.||++++.+.+. .. ..+..++|.+.|++|+++...
T Consensus 382 ~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~ 461 (917)
T COG0474 382 DLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKT 461 (917)
T ss_pred ccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEc
Confidence 000000011222222221 122 569999999999976543 21 235678888899999988752
Q ss_pred eeccCCCceeeeccCchHHHhhhccC--------hhHHHHHHHHhcc-cCCCCcEEEE----------------eeccCc
Q 004479 530 ESGTEGGKELKASLGSVDFITSLCKS--------EDESRKIKEAVNG-SSYGRGFVHA----------------ALSVNE 584 (750)
Q Consensus 530 ~~~~~~~~~~~~~kGs~~~i~~~~~~--------~~~~~~~~~~~~~-~~~g~~~~~~----------------~~~~~~ 584 (750)
.+++++.++|||||.|+++|+. ++..+.+.+..+. ..+|.++..+ ..++-.
T Consensus 462 ----~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~ 537 (917)
T COG0474 462 ----DEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLV 537 (917)
T ss_pred ----CCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccce
Confidence 2556899999999999998874 1112222211110 0111111000 000112
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-----------------------------
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----------------------------- 635 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----------------------------- 635 (750)
.+|+++|+||+|+|++++|+.|++ +||++||+||||+.||.+||++|||.
T Consensus 538 ~lGl~g~~Dppr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~ 616 (917)
T COG0474 538 FLGLTGIEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEEL 616 (917)
T ss_pred eehhhhccCCCCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhC
Confidence 389999999999999999999999 89999999999999999999999973
Q ss_pred eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHH
Q 004479 636 EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSR 715 (750)
Q Consensus 636 ~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R 715 (750)
.||||++|+||.++|+.||++ |+.|+|+|||+|||||||+||||||||+.|+|+|+++||+++++|+|..+..++.+||
T Consensus 617 ~VfARvsP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR 695 (917)
T COG0474 617 SVFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGR 695 (917)
T ss_pred cEEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhH
Confidence 299999999999999999999 9999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 004479 716 QTTSLVKQNVALALSCIILASLP 738 (750)
Q Consensus 716 ~~~~~i~~ni~~al~~~~~~~i~ 738 (750)
+++.|+++.+.+.+..|+...+.
T Consensus 696 ~~~~ni~k~i~~~l~~n~~~~~~ 718 (917)
T COG0474 696 RVYVNIKKFILYLLSKNVGEVLT 718 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875544
No 20
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.7e-85 Score=794.11 Aligned_cols=549 Identities=21% Similarity=0.256 Sum_probs=443.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecC
Q 004479 169 HVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVH 248 (750)
Q Consensus 169 ~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~ 248 (750)
..++.+++++++++++|.+++++++++.+...+..++++|+++.+++|+++.+.+++|+|+| ++++|+++
T Consensus 65 ~~iL~~aails~~~~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg----------~~~~I~a~ 134 (1053)
T TIGR01523 65 CMVLIIAAAISFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNG----------KSDAIDSH 134 (1053)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCC----------eeeecCHh
Confidence 45566788889999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccC---------------CccCCCceecceeEEEEE
Q 004479 249 DVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVG---------------DRIPGGARNLDGRMILKA 312 (750)
Q Consensus 249 ~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g---------------~~v~aGt~~~~G~~~v~v 312 (750)
||+|||+|.+++||+|||||+|++++ ..||||+|||||.||.|.+. +.+|+||.+.+|.+.+.|
T Consensus 135 eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vV 214 (1053)
T TIGR01523 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGIC 214 (1053)
T ss_pred hCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEE
Confidence 99999999999999999999999985 69999999999999999752 347999999999999999
Q ss_pred EEeccccHHHHHHHHHHHhhc-----------------------------------CCchhHHHHHHHHhHHHHHHHHHH
Q 004479 313 TKTWNESTLNRIVQLTEEAQL-----------------------------------NKPKLQRWLDEFGEQYSKVVVVLS 357 (750)
Q Consensus 313 ~~~g~~t~~~~i~~~v~~a~~-----------------------------------~k~~~q~~~~~~a~~~~~~vl~~a 357 (750)
+++|.+|.+|||.+++.+... .++|+|+.+++++.++..+.++++
T Consensus 215 vatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~ 294 (1053)
T TIGR01523 215 IATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFA 294 (1053)
T ss_pred EEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875431 248999999999998877776666
Q ss_pred HHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEc
Q 004479 358 LAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFD 436 (750)
Q Consensus 358 ~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fD 436 (750)
++++++..+ . .+...+..+++++++++|++|+++ +++++.+..+|+++++++|+.+++|+||++++||+|
T Consensus 295 ~~~~~~~~~--~-------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsD 365 (1053)
T TIGR01523 295 IIVMAAHKF--D-------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSD 365 (1053)
T ss_pred HHHHHHHhh--h-------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEec
Confidence 655433211 0 112456778999999999999986 999999999999999999999999999999999999
Q ss_pred CCCCCcCCceEEEEEEecC-Cc--------ccccC--C---c-----------c----cc--------ccCC-C-----c
Q 004479 437 KTGTLTTGGLMFKAIEPIY-GH--------WIRSK--K---T-----------H----DI--------SCCI-P-----N 473 (750)
Q Consensus 437 KTGTLT~g~~~v~~i~~~~-~~--------~~~~~--~---~-----------~----~~--------~~~~-~-----~ 473 (750)
||||||+|+|+|++++... +. .+... . . . .. .... + .
T Consensus 366 KTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1053)
T TIGR01523 366 KTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMD 445 (1053)
T ss_pred CcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccH
Confidence 9999999999999987532 10 00000 0 0 0 00 0000 0 0
Q ss_pred cHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCC--------------------------------C
Q 004479 474 CEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLP--------------------------------S 508 (750)
Q Consensus 474 ~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~--------------------------------~ 508 (750)
.-.+++..++.+.. ...+|++.|++.++.+.+++ .
T Consensus 446 ~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1053)
T TIGR01523 446 LFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQF 525 (1053)
T ss_pred HHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccccccc
Confidence 01234443333211 13589999999887543321 1
Q ss_pred ccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh-------------HHHHHHHHh-cccCCCCc
Q 004479 509 VSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED-------------ESRKIKEAV-NGSSYGRG 574 (750)
Q Consensus 509 ~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~-------------~~~~~~~~~-~~~~~g~~ 574 (750)
..+..++|.+.+++|+++.... ++++++.|+||+||.++++|.... ..+++.+.. .....|.+
T Consensus 526 ~~~~~~pFds~rK~msvv~~~~---~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlR 602 (1053)
T TIGR01523 526 EFIAEFPFDSEIKRMASIYEDN---HGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602 (1053)
T ss_pred ceEEEeccCCCCCeEEEEEEeC---CCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCe
Confidence 2345677888898888886421 123578899999999999996421 122222222 22344655
Q ss_pred EEEEeec------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH
Q 004479 575 FVHAALS------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN 630 (750)
Q Consensus 575 ~~~~~~~------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~ 630 (750)
++.++.. +-..+|+++++||+||+++++|++||+ +|++++|+|||++.||.+||+
T Consensus 603 vLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~ 681 (1053)
T TIGR01523 603 VLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQ 681 (1053)
T ss_pred EEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 5544321 001389999999999999999999999 899999999999999999999
Q ss_pred HcCCc-------------------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHH
Q 004479 631 AVGIN-------------------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPA 673 (750)
Q Consensus 631 ~~GI~-------------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapA 673 (750)
++||. .||||++|+||.++|+.+|++ |++|+|+|||+||+||
T Consensus 682 ~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapa 760 (1053)
T TIGR01523 682 EVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPS 760 (1053)
T ss_pred HcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHH
Confidence 99994 299999999999999999998 9999999999999999
Q ss_pred HHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004479 674 LAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVL 741 (750)
Q Consensus 674 L~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~ 741 (750)
|++||||||||..|+|+|+++||++|++|||+.|++++++||+++++|++++.|.++.|+..+++.++
T Consensus 761 Lk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 761 LKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred HHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999779999999999999999999999999999999999999999999999877665433
No 21
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.9e-85 Score=790.08 Aligned_cols=536 Identities=21% Similarity=0.262 Sum_probs=436.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCC
Q 004479 183 GNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262 (750)
Q Consensus 183 g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge 262 (750)
+.|++++++++++.++..+..+.+.|+++.+++|.++.|.+++|+|+| ++++|+++||+|||+|.|++||
T Consensus 102 ~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg----------~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 102 DNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG----------EKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC----------EEEEeeHHHCCCCCEEEECCCC
Confidence 357788888888888888899999999999999999999999999987 8999999999999999999999
Q ss_pred ccccCcEEEece-eeeeeccccCCcceEeeccCC----------ccCCCceecceeEEEEEEEeccccHHHHHHHHHHHh
Q 004479 263 AVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVGD----------RIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEA 331 (750)
Q Consensus 263 ~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g~----------~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a 331 (750)
+|||||++++|+ ..||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|+++|.+|.+|++.++++++
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 999999999997 599999999999999999875 589999999999999999999999999999999999
Q ss_pred hcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHH
Q 004479 332 QLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISS 410 (750)
Q Consensus 332 ~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~ 410 (750)
+.+++|+|+.+++++++++.++++++++++++.. ..+ ..+...+..++++++++|||+|+++ |++++.+..+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSL------ILG-YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hhc-CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 9899999999999999998887777766544321 111 2345678889999999999999987 9999999999
Q ss_pred HHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccc----cccCCCccHHHHHHHHHHHh
Q 004479 411 CARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHD----ISCCIPNCEKEALAVAAAME 486 (750)
Q Consensus 411 ~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~a~~e 486 (750)
|+++|+++|+++++|+||++|++|||||||||+|+|+|++++.. +..+..+.... .........+.++..++.++
T Consensus 325 m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn 403 (997)
T TIGR01106 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD-NQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCN 403 (997)
T ss_pred HHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEEC-CeEEecCCccCCCCccCCcccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999753 22221111000 00000011224555444442
Q ss_pred c----------------CCCCchHHHHHhhhcCCCC-------CCccccceeeecCCeEEEEEeCeeeccCCCceeeecc
Q 004479 487 K----------------GTTHPIGRAVVDHSIGKDL-------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASL 543 (750)
Q Consensus 487 ~----------------~s~hP~~~Ai~~~~~~~~~-------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~k 543 (750)
. ...+|++.|+++++..... ....+..++|.+.+++++++..... .++++++.|+|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~-~~~~~~~~~~K 482 (997)
T TIGR01106 404 RAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENED-PRDPRHLLVMK 482 (997)
T ss_pred CCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccC-CCCceEEEEEe
Confidence 1 1247899999998753211 1223455777778887766543110 11346788999
Q ss_pred CchHHHhhhccCh-----------hHHHHHHHHh-cccCCCCcEEEEeec-----------------------cCceEEE
Q 004479 544 GSVDFITSLCKSE-----------DESRKIKEAV-NGSSYGRGFVHAALS-----------------------VNEKVTL 588 (750)
Q Consensus 544 Gs~~~i~~~~~~~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~-----------------------~~~~lG~ 588 (750)
|+||.++++|+.. +..+.+.+.. .....|.+++.++.. +-..+|+
T Consensus 483 GApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGl 562 (997)
T TIGR01106 483 GAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562 (997)
T ss_pred CChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEE
Confidence 9999999999631 1122222222 123345555433310 0014999
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---------------------------------
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--------------------------------- 635 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--------------------------------- 635 (750)
++++||+||+++++|++|++ +|++++|+|||++.||.++|+++||.
T Consensus 563 i~i~Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G 641 (997)
T TIGR01106 563 ISMIDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHG 641 (997)
T ss_pred EeccCCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEh
Confidence 99999999999999999999 79999999999999999999999993
Q ss_pred --------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhc
Q 004479 636 --------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVA 695 (750)
Q Consensus 636 --------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aA 695 (750)
.||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||..|+|+|+++|
T Consensus 642 ~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 642 SDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred HHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 199999999999999999998 99999999999999999999999999977999999999
Q ss_pred CEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 696 DVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPS 739 (750)
Q Consensus 696 DivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~ 739 (750)
|++|++|||+.|++++++||+++.|+++++.|.++.|+..+++.
T Consensus 721 DivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 721 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred ceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999987665553
No 22
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.7e-84 Score=781.03 Aligned_cols=554 Identities=21% Similarity=0.255 Sum_probs=443.9
Q ss_pred HHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcC
Q 004479 169 HVLMAFAAFASIFMG----------NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVS 238 (750)
Q Consensus 169 ~~L~~la~~~a~~~g----------~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~ 238 (750)
..++.++++++++++ .|.+++++++++.+...+..++++|+++.+++|.++.|.+++|+|+|
T Consensus 10 ~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg-------- 81 (917)
T TIGR01116 10 VRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDG-------- 81 (917)
T ss_pred HHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECC--------
Confidence 344446666666664 68899998888888889999999999999999999999999999987
Q ss_pred CCcEEEEecCCcCCCCEEEEcCCCccccCcEEEece-eeeeeccccCCcceEeeccC-------------CccCCCceec
Q 004479 239 DLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGT-ATITIEHLTGEVKPLEAKVG-------------DRIPGGARNL 304 (750)
Q Consensus 239 ~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~-~~Vdes~LTGEs~pv~k~~g-------------~~v~aGt~~~ 304 (750)
++++|+++||+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.++ +.+|+||.+.
T Consensus 82 --~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 82 --RWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred --EEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 8999999999999999999999999999999996 79999999999999999876 6799999999
Q ss_pred ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc---chhhhH
Q 004479 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT---SVCRGS 381 (750)
Q Consensus 305 ~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~---~~~~~~ 381 (750)
+|.+.++|+++|.+|.+|||.+++++++.+++|+|+.+++++.++++++++++++++++....+.....+. ..+...
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999988877776665443311100000010 112234
Q ss_pred HHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcc--
Q 004479 382 VYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHW-- 458 (750)
Q Consensus 382 ~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~-- 458 (750)
+..++++++++|||+|+++ +++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++++.++..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 5567899999999999997 9999999999999999999999999999999999999999999999999998654221
Q ss_pred ---c--ccCCccccc---c----C---CCccHHHHHHHHHHHhc-------------CCCCchHHHHHhhhcCCCCC---
Q 004479 459 ---I--RSKKTHDIS---C----C---IPNCEKEALAVAAAMEK-------------GTTHPIGRAVVDHSIGKDLP--- 507 (750)
Q Consensus 459 ---~--~~~~~~~~~---~----~---~~~~~~~~l~~~a~~e~-------------~s~hP~~~Ai~~~~~~~~~~--- 507 (750)
+ ....+.... . . .....++++..++.+.. ...+|++.|+++++.+.+..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 0 000000000 0 0 00011223333332221 12589999999887543321
Q ss_pred --------------------CccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh-----------
Q 004479 508 --------------------SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE----------- 556 (750)
Q Consensus 508 --------------------~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~----------- 556 (750)
...+..++|.+.|++|+++... +++++.|+||+||.++++|+..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-----~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-----STGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-----CCcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 1134456677788888887642 4567889999999999999641
Q ss_pred -hHHHHHHHHhc-ccC-CCCcEEEEeecc-------------------C---ceEEEEEecCCCchhHHHHHHHHHhcCC
Q 004479 557 -DESRKIKEAVN-GSS-YGRGFVHAALSV-------------------N---EKVTLIHLEDRPRPGVSDVIAELKDHAR 611 (750)
Q Consensus 557 -~~~~~~~~~~~-~~~-~g~~~~~~~~~~-------------------~---~~lG~i~~~D~lr~~a~~~I~~Lk~~ag 611 (750)
+..+++.+... ... .|.+++.++... + ..+|+++++||+|++++++|+.||+ +|
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~-aG 553 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRT-AG 553 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHH-CC
Confidence 11222322222 233 455555443211 1 1389999999999999999999999 89
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCc-------------------------------eEEecCCHhhHHHHHHHHHhhcCCe
Q 004479 612 LRVMMLTGDHESSAQRVANAVGIN-------------------------------EVYCSLKPEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 612 i~v~mlTGD~~~tA~~iA~~~GI~-------------------------------~v~a~~~P~~K~~~V~~l~~~~g~~ 660 (750)
++++|+|||+++||.++|+++||. .||||++|+||.++|+.+|++ |++
T Consensus 554 I~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~ 632 (917)
T TIGR01116 554 IRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ-GEI 632 (917)
T ss_pred CEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-CCe
Confidence 999999999999999999999995 299999999999999999987 999
Q ss_pred EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 661 LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSV 740 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~ 740 (750)
|+|+|||+||+|||++|||||+|| .|+++|+++||+++.+|||+.|++++++||++++|+++++.|.++.|+...++.+
T Consensus 633 va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 633 VAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred EEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 999999999999999999999999 4899999999999999999999999999999999999999999998876655543
No 23
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.8e-81 Score=766.08 Aligned_cols=538 Identities=19% Similarity=0.217 Sum_probs=424.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcC
Q 004479 172 MAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVE 251 (750)
Q Consensus 172 ~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~ 251 (750)
..++++++++.++|.+++++++++.+...+..+.++|+.+.++++.. .|..++|+|+| ++++|+++||+
T Consensus 180 ~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg----------~~~~I~s~eLv 248 (1054)
T TIGR01657 180 QVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNG----------KWVTIASDELV 248 (1054)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECC----------EEEEEEcccCC
Confidence 33454555555567788888888888899999999999999998765 57889999987 89999999999
Q ss_pred CCCEEEEc--CCCccccCcEEEeceeeeeeccccCCcceEeeccC------C------------ccCCCceecc------
Q 004479 252 VGSYILVG--AGEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVG------D------------RIPGGARNLD------ 305 (750)
Q Consensus 252 ~GDiI~v~--~Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g------~------------~v~aGt~~~~------ 305 (750)
|||+|.|+ +|++|||||+|++|++.||||+|||||.|+.|.+. + .+|+||.+.+
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g 328 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG 328 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC
Confidence 99999999 99999999999999999999999999999999863 1 3899999984
Q ss_pred -eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHH
Q 004479 306 -GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYR 384 (750)
Q Consensus 306 -G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~ 384 (750)
|.+.++|++||.+|..|++.+.+...+..++++++...++...+..+ +++.+++..+. ... ....+...+.+
T Consensus 329 ~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~----a~i~~i~~~~~--~~~-~~~~~~~~~l~ 401 (1054)
T TIGR01657 329 DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL----ALIGFIYTIIE--LIK-DGRPLGKIILR 401 (1054)
T ss_pred CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHH----HHHHHHHHHHH--HHH-cCCcHHHHHHH
Confidence 88999999999999999999999888888888888877765544322 22222111111 111 12245677899
Q ss_pred HHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCC
Q 004479 385 ALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKK 463 (750)
Q Consensus 385 al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~ 463 (750)
+++++++++||+||++ +++++.|+.+|+|+||+||++.++|.+|++|++|||||||||+|+|+|.++++.+........
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~ 481 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI 481 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc
Confidence 9999999999999997 999999999999999999999999999999999999999999999999999865432110000
Q ss_pred ccccccCCCccHHHHHHHHHHHh-------cCCCCchHHHHHhhhcC-----CC-----------------CCCccccce
Q 004479 464 THDISCCIPNCEKEALAVAAAME-------KGTTHPIGRAVVDHSIG-----KD-----------------LPSVSIDRF 514 (750)
Q Consensus 464 ~~~~~~~~~~~~~~~l~~~a~~e-------~~s~hP~~~Ai~~~~~~-----~~-----------------~~~~~~~~~ 514 (750)
.... ........+...+.+. ....+|++.|++++... .. .....+..|
T Consensus 482 ~~~~---~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~ 558 (1054)
T TIGR01657 482 VTED---SSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558 (1054)
T ss_pred cccc---cccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEE
Confidence 0000 0011222233233322 23479999999987521 00 011224568
Q ss_pred eeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHh-cccCCCCcEEEEeecc-----------
Q 004479 515 EYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAV-NGSSYGRGFVHAALSV----------- 582 (750)
Q Consensus 515 ~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~----------- 582 (750)
+|.+.+++|+++.... ++++++.++|||||.|.++|......+.+.+.. .....|.+++.++...
T Consensus 559 pF~S~~krMsvvv~~~---~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~ 635 (1054)
T TIGR01657 559 QFSSALQRMSVIVSTN---DERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD 635 (1054)
T ss_pred eecCCCCEEEEEEEEc---CCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh
Confidence 8888998888876432 245678999999999999998532222222211 1234466665544210
Q ss_pred ---------CceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc------------------
Q 004479 583 ---------NEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------------------ 635 (750)
Q Consensus 583 ---------~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------------------ 635 (750)
-..+|+++|+||+||+++++|++||+ +|++++|+||||+.||.+||+++||.
T Consensus 636 ~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~-agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~ 714 (1054)
T TIGR01657 636 LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGK 714 (1054)
T ss_pred ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCC
Confidence 11389999999999999999999999 89999999999999999999999992
Q ss_pred -----------------------------------------------------------------eEEecCCHhhHHHHH
Q 004479 636 -----------------------------------------------------------------EVYCSLKPEDKLNHV 650 (750)
Q Consensus 636 -----------------------------------------------------------------~v~a~~~P~~K~~~V 650 (750)
.||||++|+||.++|
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV 794 (1054)
T TIGR01657 715 PNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLV 794 (1054)
T ss_pred CceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHH
Confidence 299999999999999
Q ss_pred HHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 651 KRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALS 730 (750)
Q Consensus 651 ~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~ 730 (750)
+.||+. |++|+|||||+||+||||+||||||||+ +|++ .+||+++++|+|+.++++|++||+++.++++.+.|.+.
T Consensus 795 ~~lq~~-g~~V~m~GDG~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~ 870 (1054)
T TIGR01657 795 ELLQKL-DYTVGMCGDGANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMAL 870 (1054)
T ss_pred HHHHhC-CCeEEEEeCChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 9999999999999999999999999986 3544 88999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 004479 731 CIILASLP 738 (750)
Q Consensus 731 ~~~~~~i~ 738 (750)
|+++..+.
T Consensus 871 ~~~~~~~~ 878 (1054)
T TIGR01657 871 YSLIQFYS 878 (1054)
T ss_pred HHHHHHHH
Confidence 88765443
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.9e-81 Score=715.72 Aligned_cols=478 Identities=31% Similarity=0.431 Sum_probs=413.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEE
Q 004479 193 AMFNLAHIAEEFFTSRAMVDVKELKE--NYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEV 270 (750)
Q Consensus 193 ~~~~l~~~~e~~~~~ra~~~l~~L~~--~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~v 270 (750)
++..++.+++.+.++++.+.+++|.+ +.|++++|+|+| +++|++++|+|||+|.+++||+|||||+|
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-----------~~~V~~~~l~~GDiv~v~~G~~iP~Dg~v 72 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-----------WKEIPASDLVPGDIVLVKSGEIVPADGVL 72 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-----------eEEEEHHHCCCCCEEEECCCCEeeeeEEE
Confidence 34556778899999999999999998 899999999853 57899999999999999999999999999
Q ss_pred EeceeeeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHH-hHH
Q 004479 271 YQGTATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFG-EQY 349 (750)
Q Consensus 271 l~G~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a-~~~ 349 (750)
++|++.||||+|||||.|+.|.+|+.+++|+.+.+|.+.++|+++|.+|+.++|..++++++..|+++|+..++++ .++
T Consensus 73 l~g~~~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~ 152 (499)
T TIGR01494 73 LSGSCFVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIF 152 (499)
T ss_pred EEccEEEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988999999999999 788
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhc
Q 004479 350 SKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALA 428 (750)
Q Consensus 350 ~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg 428 (750)
++++++++++++++..+. .+ ....+..++.+++++++++|||+|+++ |+++..+..+++++|+++|+++++|+||
T Consensus 153 ~~~~~~la~~~~~~~~~~-~~---~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~ 228 (499)
T TIGR01494 153 ILFVLLIALAVFLFWAIG-LW---DPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELG 228 (499)
T ss_pred HHHHHHHHHHHHHHHHHH-Hc---ccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhcc
Confidence 888877777664432111 11 100255689999999999999999997 9999999999999999999999999999
Q ss_pred cccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCC
Q 004479 429 SCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPS 508 (750)
Q Consensus 429 ~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~ 508 (750)
++|++|||||||||+|+|+|+++++.++ |+.+.||+++|++++++.+..
T Consensus 229 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------------------------~~~s~hp~~~ai~~~~~~~~~-- 277 (499)
T TIGR01494 229 KVDYICSDKTGTLTKNEMSFKKVSVLGG-----------------------------EYLSGHPDERALVKSAKWKIL-- 277 (499)
T ss_pred CCcEEEeeCCCccccCceEEEEEEecCC-----------------------------CcCCCChHHHHHHHHhhhcCc--
Confidence 9999999999999999999999875321 356899999999999865432
Q ss_pred ccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEE
Q 004479 509 VSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTL 588 (750)
Q Consensus 509 ~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~ 588 (750)
...+|+..+ +|+.+.+.+. ++ .++||+++++.+.|...++ ...+ . ...|.+.++++. .+..+|+
T Consensus 278 -~~~~f~~~~-~~~~~~~~~~-----~~---~~~~G~~~~i~~~~~~~~~--~~~~-~--~~~g~~~~~~a~-~~~~~g~ 341 (499)
T TIGR01494 278 -NVFEFSSVR-KRMSVIVRGP-----DG---TYVKGAPEFVLSRVKDLEE--KVKE-L--AQSGLRVLAVAS-KETLLGL 341 (499)
T ss_pred -ceeccCCCC-ceEEEEEecC-----Cc---EEEeCCHHHHHHhhHHHHH--HHHH-H--HhCCCEEEEEEE-CCeEEEE
Confidence 345677776 7887777641 12 3689999999988753211 1111 1 124556666553 3567999
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCc
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGI 668 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~ 668 (750)
+.++|++|++++++|+.|++ +|++++|+|||++.+|.++|+++|| |++++|+||.++|+.+|++ |+.|+|+|||+
T Consensus 342 i~l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~lgi---~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ 416 (499)
T TIGR01494 342 LGLEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKELGI---FARVTPEEKAALVEALQKK-GRVVAMTGDGV 416 (499)
T ss_pred EEecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCc---eeccCHHHHHHHHHHHHHC-CCEEEEECCCh
Confidence 99999999999999999999 7999999999999999999999997 8999999999999999988 99999999999
Q ss_pred cCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 004479 669 NDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPSVLGF 743 (750)
Q Consensus 669 NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~~~G~ 743 (750)
||+|||++|||||+|| |+++||++|+++++..++.++++||+++++++||+.|+++||++.++++++++
T Consensus 417 nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 417 NDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred hhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 68999999999999999999999999999999999999999988766655543
No 25
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.4e-68 Score=654.73 Aligned_cols=525 Identities=18% Similarity=0.194 Sum_probs=394.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCc
Q 004479 189 GLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDC 268 (750)
Q Consensus 189 ~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg 268 (750)
++++++..+.+++|++.++|+++.+ .++.++|+|+++ ++++++++||+|||+|.|++||+|||||
T Consensus 58 ~~v~~~~~~~~~~ed~~r~~~d~~~------n~~~~~v~~~~~---------~~~~i~~~~l~~GDiv~l~~g~~iPaD~ 122 (1057)
T TIGR01652 58 AFVLIVTAIKEAIEDIRRRRRDKEV------NNRLTEVLEGHG---------QFVEIPWKDLRVGDIVKVKKDERIPADL 122 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHH------hCcEEEEECCCC---------cEEEeeeecccCCCEEEEcCCCcccceE
Confidence 4455566788999999999998654 467899998632 7899999999999999999999999999
Q ss_pred EEEe-----ceeeeeeccccCCcceEeeccC------------------------------------------------C
Q 004479 269 EVYQ-----GTATITIEHLTGEVKPLEAKVG------------------------------------------------D 295 (750)
Q Consensus 269 ~vl~-----G~~~Vdes~LTGEs~pv~k~~g------------------------------------------------~ 295 (750)
+|++ |.+.||||.|||||.|+.|++. +
T Consensus 123 ~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N 202 (1057)
T TIGR01652 123 LLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDN 202 (1057)
T ss_pred EEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHH
Confidence 9997 7799999999999999999742 2
Q ss_pred ccCCCceecc-eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhh------
Q 004479 296 RIPGGARNLD-GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLF------ 368 (750)
Q Consensus 296 ~v~aGt~~~~-G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~------ 368 (750)
.++.||.+.+ |.+.+.|++||.+|.+++ .......+++++|+.++++..++..+.++++++.+++..++.
T Consensus 203 ~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~ 279 (1057)
T TIGR01652 203 ILLRGCTLRNTDWVIGVVVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKD 279 (1057)
T ss_pred hHhcCCEecCCCeEEEEEEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCC
Confidence 3567888887 999999999999998765 344556678999999999998887777777776666543322
Q ss_pred hhccc-c------cchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHH------HHHHHc----CccccCchHHHhhccc
Q 004479 369 KWSFI-G------TSVCRGSVYRALGLMVAASPCALAVA-PLAYATAI------SSCARK----GILLKGGQVLDALASC 430 (750)
Q Consensus 369 ~~~~~-~------~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~------~~~~~~----gilvk~~~~lE~lg~v 430 (750)
.|+.. . ...+...+.+++.++...+|.+|++. .++...+. .+|.++ ++++|+.+.+|+||++
T Consensus 280 ~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v 359 (1057)
T TIGR01652 280 LWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQV 359 (1057)
T ss_pred ccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCe
Confidence 12110 0 00112256678888899999999875 77766666 567764 5999999999999999
Q ss_pred cEEEEcCCCCCcCCceEEEEEEecCCcccccCCc----------c----------cccc--------------CCCcc--
Q 004479 431 HTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT----------H----------DISC--------------CIPNC-- 474 (750)
Q Consensus 431 ~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~----------~----------~~~~--------------~~~~~-- 474 (750)
++||+|||||||+|+|+++++... |..+..... . .... .....
T Consensus 360 ~~I~sDKTGTLT~N~M~~~~~~i~-g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1057)
T TIGR01652 360 EYIFSDKTGTLTQNIMEFKKCSIA-GVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAK 438 (1057)
T ss_pred eEEEEcCCCceeeeeEEEEEEEEC-CEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhH
Confidence 999999999999999999999743 322211000 0 0000 00000
Q ss_pred -HHHHHHHHHHH-----h---cC-------CCCchHHHHHhhhcCCCCCC---------------------ccccceeee
Q 004479 475 -EKEALAVAAAM-----E---KG-------TTHPIGRAVVDHSIGKDLPS---------------------VSIDRFEYF 517 (750)
Q Consensus 475 -~~~~l~~~a~~-----e---~~-------s~hP~~~Ai~~~~~~~~~~~---------------------~~~~~~~~~ 517 (750)
..+.+...+.+ + .. +.+|.+.|+++++...++.. ..+..+++.
T Consensus 439 ~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 518 (1057)
T TIGR01652 439 RINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFN 518 (1057)
T ss_pred HHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccC
Confidence 11222222211 1 11 46899999999875544321 112235667
Q ss_pred cCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChh--HHHHHHHHh-cccCCCCcEEEEeec-------------
Q 004479 518 PGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSED--ESRKIKEAV-NGSSYGRGFVHAALS------------- 581 (750)
Q Consensus 518 ~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~--~~~~~~~~~-~~~~~g~~~~~~~~~------------- 581 (750)
+.|++|+++...+ +++++.++||+++.|.++|...+ ..+.+.+.. .....|.+++..+..
T Consensus 519 s~rKrmSviv~~~----~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~ 594 (1057)
T TIGR01652 519 SDRKRMSVIVRNP----DGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEE 594 (1057)
T ss_pred CCCCeEEEEEEeC----CCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHH
Confidence 7787787776432 45688999999999999997421 122222222 123345555443311
Q ss_pred ------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--
Q 004479 582 ------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-- 635 (750)
Q Consensus 582 ------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-- 635 (750)
+-..+|+++++||+|++++++|+.||+ |||++||+|||+.+||.+||++|||.
T Consensus 595 ~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~~ii~~ 673 (1057)
T TIGR01652 595 YNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSCRLLSR 673 (1057)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 011389999999999999999999999 89999999999999999999999872
Q ss_pred ----------------------------------------------------------------------e--EEecCCH
Q 004479 636 ----------------------------------------------------------------------E--VYCSLKP 643 (750)
Q Consensus 636 ----------------------------------------------------------------------~--v~a~~~P 643 (750)
+ ||||++|
T Consensus 674 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP 753 (1057)
T TIGR01652 674 NMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753 (1057)
T ss_pred CCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCH
Confidence 0 8999999
Q ss_pred hhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHH-HHHHHHHHHHH
Q 004479 644 EDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCV-AKSRQTTSLVK 722 (750)
Q Consensus 644 ~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i-~~~R~~~~~i~ 722 (750)
+||.++|+.+|+..|++|+|+|||+||+|||++|||||++.+.+..+|+++||++|. +|+.|.+++ .+||.++++++
T Consensus 754 ~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~ 831 (1057)
T TIGR01652 754 SQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRIS 831 (1057)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHH
Confidence 999999999998558999999999999999999999999865444479999999995 599999998 67999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004479 723 QNVALALSCIILASLPS 739 (750)
Q Consensus 723 ~ni~~al~~~~~~~i~~ 739 (750)
+.+.|.+..|++..++.
T Consensus 832 ~~i~~~~~kn~~~~~~~ 848 (1057)
T TIGR01652 832 KMILYFFYKNLIFAIIQ 848 (1057)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998776663
No 26
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-70 Score=604.89 Aligned_cols=526 Identities=22% Similarity=0.272 Sum_probs=410.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEE
Q 004479 192 LAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVY 271 (750)
Q Consensus 192 ~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl 271 (750)
...+.+...+..|+..++.+-++...++.|..++|+|+| +...+..+|+++||++.++-|++||||.+++
T Consensus 133 ~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg----------~k~~i~~eelVvGD~v~vk~GdrVPADiRii 202 (1019)
T KOG0203|consen 133 AAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDG----------EKMTINAEELVVGDLVEVKGGDRVPADIRII 202 (1019)
T ss_pred EEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecc----------eeEEechhhcccccceeeccCCcccceeEEE
Confidence 333344455677888999999999999999999999998 7899999999999999999999999999999
Q ss_pred ecee-eeeeccccCCcceEeeccC----------CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHH
Q 004479 272 QGTA-TITIEHLTGEVKPLEAKVG----------DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQR 340 (750)
Q Consensus 272 ~G~~-~Vdes~LTGEs~pv~k~~g----------~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~ 340 (750)
++.. ++|+|+|||||.|..+.+. +.-+.+|...+|..+..|.++|.+|.+|+|..+...-...++|+++
T Consensus 203 s~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ 282 (1019)
T KOG0203|consen 203 SATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAK 282 (1019)
T ss_pred EecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchh
Confidence 9985 9999999999999998763 2246688888999999999999999999999999988899999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCcccc
Q 004479 341 WLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLK 419 (750)
Q Consensus 341 ~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk 419 (750)
.+++|..++..+.+.+++..+++...+ . ..+..++...+.++|+.+|.+|+.. +..+....++|+++++++|
T Consensus 283 ei~~fi~~it~vAi~~~i~fF~~~~~~-g------y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vk 355 (1019)
T KOG0203|consen 283 EIEHFIHIITGVAIFLGISFFILALIL-G------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVK 355 (1019)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhh-c------chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEe
Confidence 999999988887777766665444322 1 2345567778899999999999875 8888889999999999999
Q ss_pred CchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccC--CccccccCC-CccHHHHHHHHHHHhc---------
Q 004479 420 GGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSK--KTHDISCCI-PNCEKEALAVAAAMEK--------- 487 (750)
Q Consensus 420 ~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~--~~~~~~~~~-~~~~~~~l~~~a~~e~--------- 487 (750)
+.++.|+||+..+||.|||||||+|+|+|..+|..+.....+. +......+. ...-.++++.+.-+.+
T Consensus 356 nLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~d 435 (1019)
T KOG0203|consen 356 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDD 435 (1019)
T ss_pred eeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccC
Confidence 9999999999999999999999999999999986443221111 000111111 1112233333332221
Q ss_pred -------CCCCchHHHHHhhhcCC---------CCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhh
Q 004479 488 -------GTTHPIGRAVVDHSIGK---------DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITS 551 (750)
Q Consensus 488 -------~s~hP~~~Ai~~~~~~~---------~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~ 551 (750)
-..++.+.|+++++..- ..+.....+|++.....++....... ++.++.+..||+||.+++
T Consensus 436 vPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~---~~~~~~l~mKGape~il~ 512 (1019)
T KOG0203|consen 436 VPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDP---SDPRFLLVMKGAPERILD 512 (1019)
T ss_pred CceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCC---CCccceeeecCChHHHHh
Confidence 13367778888877321 11111223444444444433322211 356778889999999999
Q ss_pred hccChh-----------HHHHHHHHh-ccc-----------------CCCCcEEEEe----e--ccCceEEEEEecCCCc
Q 004479 552 LCKSED-----------ESRKIKEAV-NGS-----------------SYGRGFVHAA----L--SVNEKVTLIHLEDRPR 596 (750)
Q Consensus 552 ~~~~~~-----------~~~~~~~~~-~~~-----------------~~g~~~~~~~----~--~~~~~lG~i~~~D~lr 596 (750)
+|+... ..+.+.+.. ... .++.+..+-. + ....++|++.+-||+|
T Consensus 513 ~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR 592 (1019)
T KOG0203|consen 513 RCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPR 592 (1019)
T ss_pred hccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCc
Confidence 998620 011111111 111 1122221110 0 0112399999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----------------------------------------
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE---------------------------------------- 636 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~---------------------------------------- 636 (750)
..+++++..||. |||+++|+|||++.||.++|+++||..
T Consensus 593 ~~vP~Av~~Crs-AGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~ 671 (1019)
T KOG0203|consen 593 AAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSS 671 (1019)
T ss_pred ccCchhhhhhhh-hCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCH
Confidence 999999999999 899999999999999999999999741
Q ss_pred -------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 637 -------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 637 -------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
||||.||+||+-+|+..|++ |.+|+.+|||+||+||||.||||||||..|+|+++++||++|+|||
T Consensus 672 ~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDN 750 (1019)
T KOG0203|consen 672 EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 750 (1019)
T ss_pred HHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCc
Confidence 99999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 704 ISGVPFCVAKSRQTTSLVKQNVALALSCIILASLPS 739 (750)
Q Consensus 704 l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i~~ 739 (750)
|++|+.-+.+||-++.|.|+.|+|.++.|+--+.|.
T Consensus 751 FASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 751 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred chhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 999999999999999999999999999887766664
No 27
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-68 Score=557.10 Aligned_cols=477 Identities=24% Similarity=0.379 Sum_probs=377.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-ceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEec
Q 004479 195 FNLAHIAEEFFTSRAMVDVKELKENYPD-SVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQG 273 (750)
Q Consensus 195 ~~l~~~~e~~~~~ra~~~l~~L~~~~p~-~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G 273 (750)
+.+..+.|.+.+.|....-..|++.+.+ .++++++++ +++.|+..+|+.||+|+|+.||.||+||.|++|
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g---------~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG 146 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADG---------SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG 146 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCC---------CeeeccccccccCCEEEEecCCCccCCCeEEee
Confidence 3456677888888877777777665443 567776643 899999999999999999999999999999999
Q ss_pred eeeeeeccccCCcceEeeccC---CccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHH
Q 004479 274 TATITIEHLTGEVKPLEAKVG---DRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYS 350 (750)
Q Consensus 274 ~~~Vdes~LTGEs~pv~k~~g---~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~ 350 (750)
.++||||.+||||.||-|++| +.|-.||.+++..+++++|....+|.+.|++.++|.++.+|+|-+--++-+-.-++
T Consensus 147 ~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT 226 (681)
T COG2216 147 VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT 226 (681)
T ss_pred eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH
Confidence 999999999999999999998 78999999999999999999999999999999999999999998776654433222
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhhhhhhhh-hHHHHHHHHHHHHHHcCccccCchHHHhhcc
Q 004479 351 KVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAASPCALA-VAPLAYATAISSCARKGILLKGGQVLDALAS 429 (750)
Q Consensus 351 ~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a~P~aL~-lap~a~~~~~~~~~~~gilvk~~~~lE~lg~ 429 (750)
.+ ++++++..+-+..+..+ -.-.+...++++|..+|..++ +.+.-=..|+.|+.+.+++-++++++|..|.
T Consensus 227 li-----FL~~~~Tl~p~a~y~~g---~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGD 298 (681)
T COG2216 227 LI-----FLLAVATLYPFAIYSGG---GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGD 298 (681)
T ss_pred HH-----HHHHHHhhhhHHHHcCC---CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCC
Confidence 22 11111111111111101 112466778899999999885 3344446688999999999999999999999
Q ss_pred ccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCc
Q 004479 430 CHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSV 509 (750)
Q Consensus 430 v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~ 509 (750)
+|+++.|||||+|.|+-.-+++.|.+|.+ .+++...+....-..+.|-.++|+..+++.+....
T Consensus 299 vdtliLDKTGTIT~GnR~A~~f~p~~gv~----------------~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~ 362 (681)
T COG2216 299 VDTLLLDKTGTITLGNRQASEFIPVPGVS----------------EEELADAAQLASLADETPEGRSIVELAKKLGIELR 362 (681)
T ss_pred ccEEEecccCceeecchhhhheecCCCCC----------------HHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCC
Confidence 99999999999999999999999988875 67776666666666788999999999876543221
Q ss_pred --cc---cceeeecCC-eEEEEEeCeeeccCCCceeeeccCchHHHhhhccC-----hhHHHHHHHHhcccCCCCcEEEE
Q 004479 510 --SI---DRFEYFPGR-GLTATVNGIESGTEGGKELKASLGSVDFITSLCKS-----EDESRKIKEAVNGSSYGRGFVHA 578 (750)
Q Consensus 510 --~~---~~~~~~~g~-g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~ 578 (750)
.. .+|-.++.+ +++++ + . .++ ..+.||+.+.+.+...+ ..+.+...+... ..|.+...+
T Consensus 363 ~~~~~~~~~fvpFtA~TRmSGv-d---~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs--~~GGTPL~V 432 (681)
T COG2216 363 EDDLQSHAEFVPFTAQTRMSGV-D---L--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVS--RLGGTPLVV 432 (681)
T ss_pred cccccccceeeecceecccccc-c---C--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHH--hcCCCceEE
Confidence 11 123222232 33322 1 1 122 45789999988765442 122222222222 234444443
Q ss_pred eeccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC
Q 004479 579 ALSVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 579 ~~~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g 658 (750)
. .+++.+|++.++|-+||+.+|-+++||+ .|+|++|+||||+.||.+||++.|+|++.|+++||||.++|++-|.+ |
T Consensus 433 ~-~~~~~~GVI~LkDivK~Gi~ERf~elR~-MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAeatPEdK~~~I~~eQ~~-g 509 (681)
T COG2216 433 V-ENGRILGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAE-G 509 (681)
T ss_pred E-ECCEEEEEEEehhhcchhHHHHHHHHHh-cCCeEEEEeCCCHHHHHHHHHHhCchhhhhcCChHHHHHHHHHHHhc-C
Confidence 3 3466799999999999999999999999 59999999999999999999999999999999999999999999998 9
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTT 718 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~ 718 (750)
+-|+|+|||+||||||++||||+||.+ ||.+|+|++.+|=+|.|..++.+.+.+|++..
T Consensus 510 rlVAMtGDGTNDAPALAqAdVg~AMNs-GTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 510 RLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred cEEEEcCCCCCcchhhhhcchhhhhcc-ccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999986 89999999999999999999999999999875
No 28
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-67 Score=587.88 Aligned_cols=548 Identities=20% Similarity=0.226 Sum_probs=399.7
Q ss_pred CCCCChHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCc
Q 004479 163 GGKVNIHVLMAFAAFASIFMGNS-LEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLA 241 (750)
Q Consensus 163 ~~~~~~~~L~~la~~~a~~~g~~-~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~ 241 (750)
+..+|...+..+-.++-|....| +.+..|+++...+..+..|..+++...++++.+. +..++|+|+| .
T Consensus 191 ~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g----------~ 259 (1140)
T KOG0208|consen 191 KEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDG----------F 259 (1140)
T ss_pred HhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECC----------E
Confidence 34455555555444444444444 4455555555566777788888888888888764 4678999987 8
Q ss_pred EEEEecCCcCCCCEEEEcC-CCccccCcEEEeceeeeeeccccCCcceEeeccC-------------------CccCCCc
Q 004479 242 YRSVPVHDVEVGSYILVGA-GEAVPVDCEVYQGTATITIEHLTGEVKPLEAKVG-------------------DRIPGGA 301 (750)
Q Consensus 242 ~~~V~~~~l~~GDiI~v~~-Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~g-------------------~~v~aGt 301 (750)
+++|.++||+|||++.+.+ |-..|||++|++|+|.||||+|||||+|+.|.|- +.+|.||
T Consensus 260 ~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT 339 (1140)
T KOG0208|consen 260 WETVDSSELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGT 339 (1140)
T ss_pred EEEEeccccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccc
Confidence 9999999999999999998 9999999999999999999999999999999873 3478899
Q ss_pred eec------ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhccccc
Q 004479 302 RNL------DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGT 375 (750)
Q Consensus 302 ~~~------~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~ 375 (750)
.++ .+...+.|++||..|+-|++++.+-.+.....++-|..-+ |...+..+|++.++...+.+. . ..
T Consensus 340 ~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~----fi~~l~~ia~~gfiy~~i~l~--~-~g 412 (1140)
T KOG0208|consen 340 KVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFK----FILFLVIIALIGFIYTAIVLN--L-LG 412 (1140)
T ss_pred eEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHH----HHHHHHHHHHHHHHHHhHhHH--H-cC
Confidence 876 5789999999999999999999887766544333333333 222323333333222211111 1 12
Q ss_pred chhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEec
Q 004479 376 SVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPI 454 (750)
Q Consensus 376 ~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~ 454 (750)
......+.+++.++.+.+|.|||.+ +++...+.+|+.|+||.|-+++.+...|++|++|||||||||++.+.+..+.+.
T Consensus 413 ~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~ 492 (1140)
T KOG0208|consen 413 VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPV 492 (1140)
T ss_pred CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEec
Confidence 2456689999999999999999987 999999999999999999999999999999999999999999999999999875
Q ss_pred CCcccccCCc------c-------ccccCCCccHHHHHHHHHHH---hc----CCCCchHHHHHhhh-----c-------
Q 004479 455 YGHWIRSKKT------H-------DISCCIPNCEKEALAVAAAM---EK----GTTHPIGRAVVDHS-----I------- 502 (750)
Q Consensus 455 ~~~~~~~~~~------~-------~~~~~~~~~~~~~l~~~a~~---e~----~s~hP~~~Ai~~~~-----~------- 502 (750)
.+........ . ....+.. ....+..-.+.+ .. ...+|++.-..+.. +
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~ 571 (1140)
T KOG0208|consen 493 ERNVDDGPELKVVTEDSLQLFYKLSLRSSSL-PMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEA 571 (1140)
T ss_pred cccccccchhhhhhhhhccceeeccccccCC-chHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchh
Confidence 4321111000 0 0000000 001111111111 11 11234443222211 0
Q ss_pred -----------------------CCCC-CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH
Q 004479 503 -----------------------GKDL-PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE 558 (750)
Q Consensus 503 -----------------------~~~~-~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~ 558 (750)
+.+. ....+..|++.+...+|+++.... ++++.+.|+|||||.|.+.|+.+..
T Consensus 572 ~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~---~e~~~~~ftKGaPE~I~~ic~p~tv 648 (1140)
T KOG0208|consen 572 TREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTG---GEDKMMVFTKGAPESIAEICKPETV 648 (1140)
T ss_pred hhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecC---CCCceEeeccCCHHHHHHhcCcccC
Confidence 0000 122345677877777777765432 4688999999999999999997632
Q ss_pred HHHHHHHhc-ccCCCCcEEEEee--------------------ccCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEe
Q 004479 559 SRKIKEAVN-GSSYGRGFVHAAL--------------------SVNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMML 617 (750)
Q Consensus 559 ~~~~~~~~~-~~~~g~~~~~~~~--------------------~~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~ml 617 (750)
.....+..+ ....|.+++..+- ++-+.+|++.|++++|++++.+|++|.+ |+||++|+
T Consensus 649 P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~-AnIRtVMc 727 (1140)
T KOG0208|consen 649 PADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNR-ANIRTVMC 727 (1140)
T ss_pred CccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHh-hcceEEEE
Confidence 222222221 1233445544321 1122499999999999999999999999 89999999
Q ss_pred cCCCHHHHHHHHHHcCCce-------------------------------------------------------------
Q 004479 618 TGDHESSAQRVANAVGINE------------------------------------------------------------- 636 (750)
Q Consensus 618 TGD~~~tA~~iA~~~GI~~------------------------------------------------------------- 636 (750)
||||..||..|||+|||.+
T Consensus 728 TGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~ 807 (1140)
T KOG0208|consen 728 TGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAM 807 (1140)
T ss_pred cCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEe
Confidence 9999999999999999952
Q ss_pred ------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHH
Q 004479 637 ------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAI 692 (750)
Q Consensus 637 ------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~ 692 (750)
|||||+|+||.++|++||+. |++|+|||||.||+.|||+|||||+++. ..|.
T Consensus 808 sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEAS 883 (1140)
T KOG0208|consen 808 SGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEAS 883 (1140)
T ss_pred cCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHh
Confidence 99999999999999999998 9999999999999999999999999986 3467
Q ss_pred hhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 693 AVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL 737 (750)
Q Consensus 693 ~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i 737 (750)
-+|.+.---.+++.++++|++||..+-.-...++|...|.++..+
T Consensus 884 vAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFi 928 (1140)
T KOG0208|consen 884 VAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFI 928 (1140)
T ss_pred hcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 789999888899999999999999988888888777777665544
No 29
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-67 Score=561.84 Aligned_cols=505 Identities=21% Similarity=0.249 Sum_probs=395.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCc
Q 004479 184 NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEA 263 (750)
Q Consensus 184 ~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~ 263 (750)
+|.+...|..++.+...+....++.+-+...+|++....++.|+||| +|.++++.+|+||||+.++.|++
T Consensus 96 DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDG----------kw~E~eAs~lVPGDIlsik~GdI 165 (942)
T KOG0205|consen 96 DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDG----------KWSEQEASILVPGDILSIKLGDI 165 (942)
T ss_pred chhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecC----------eeeeeeccccccCceeeeccCCE
Confidence 46665555555555544444555666667778888777889999998 99999999999999999999999
Q ss_pred cccCcEEEecee-eeeeccccCCcceEeeccCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHH
Q 004479 264 VPVDCEVYQGTA-TITIEHLTGEVKPLEAKVGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWL 342 (750)
Q Consensus 264 VPaDg~vl~G~~-~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~ 342 (750)
|||||++++|.- .||+|.|||||.||.|.+||++|+||.+.+|.+.++|++||..|..||-..++.. ..+...+|+.+
T Consensus 166 iPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVL 244 (942)
T KOG0205|consen 166 IPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVL 244 (942)
T ss_pred ecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHH
Confidence 999999999986 8999999999999999999999999999999999999999999999999999988 55668899999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhHHHHHHHHHHhh-hhhhhhhH-HHHHHHHHHHHHHcCccccC
Q 004479 343 DEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCRGSVYRALGLMVAA-SPCALAVA-PLAYATAISSCARKGILLKG 420 (750)
Q Consensus 343 ~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~~~~~~al~vlv~a-~P~aL~la-p~a~~~~~~~~~~~gilvk~ 420 (750)
+.+..+....+.+.-++..++ ..+.. . ...+.....+.++++. +|.|+|-+ ++.++.|..+++++|.++|.
T Consensus 245 t~IGn~ci~si~~g~lie~~v----my~~q--~-R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkr 317 (942)
T KOG0205|consen 245 TGIGNFCICSIALGMLIEITV----MYPIQ--H-RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (942)
T ss_pred HhhhhHHHHHHHHHHHHHHHh----hhhhh--h-hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHH
Confidence 999887654432222221111 11111 1 1122334455666665 99999875 88999999999999999999
Q ss_pred chHHHhhccccEEEEcCCCCCcCCceEEEE--EE-ecCCcccccCCccccccCCCccHHHHHHHHHHH-hcCCCCchHHH
Q 004479 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKA--IE-PIYGHWIRSKKTHDISCCIPNCEKEALAVAAAM-EKGTTHPIGRA 496 (750)
Q Consensus 421 ~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~--i~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~-e~~s~hP~~~A 496 (750)
..++|.|+.+|++|+|||||||.|+++|.+ +. ...|. ++++++-.|+.. .....+.+++|
T Consensus 318 mtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv----------------~~D~~~L~A~rAsr~en~DAID~A 381 (942)
T KOG0205|consen 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV----------------DKDDVLLTAARASRKENQDAIDAA 381 (942)
T ss_pred HHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC----------------ChHHHHHHHHHHhhhcChhhHHHH
Confidence 999999999999999999999999999987 31 12232 255555554433 33345788899
Q ss_pred HHhhhcCC-----CCCCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-HHHHHHHh-ccc
Q 004479 497 VVDHSIGK-----DLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-SRKIKEAV-NGS 569 (750)
Q Consensus 497 i~~~~~~~-----~~~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~~~~~~~~-~~~ 569 (750)
++....+. ++...+..+|+.++ ++...++.. ++++.+...||+|+++++.|....+ .++..+.. +..
T Consensus 382 ~v~~L~dPKeara~ikevhF~PFnPV~-Krta~ty~d-----~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~A 455 (942)
T KOG0205|consen 382 IVGMLADPKEARAGIKEVHFLPFNPVD-KRTALTYID-----PDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFA 455 (942)
T ss_pred HHHhhcCHHHHhhCceEEeeccCCccc-cceEEEEEC-----CCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHH
Confidence 98876432 23333334444443 445555544 4788889999999999999986433 22222222 112
Q ss_pred CCCCcEEEEeecc---------C---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--
Q 004479 570 SYGRGFVHAALSV---------N---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-- 635 (750)
Q Consensus 570 ~~g~~~~~~~~~~---------~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-- 635 (750)
++|.+-..++... . +.+|++-+-||+|.+..++|++-.+ .|++|.|+|||....+...++++|+-
T Consensus 456 eRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~-lGv~VkmitgdqlaI~keTgrrlgmgtn 534 (942)
T KOG0205|consen 456 ERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTN 534 (942)
T ss_pred HhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHh-ccceeeeecchHHHHHHhhhhhhccccC
Confidence 3333322222111 1 1389999999999999999999988 69999999999999999999999983
Q ss_pred ----------------------------eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCC
Q 004479 636 ----------------------------EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRA 687 (750)
Q Consensus 636 ----------------------------~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~ 687 (750)
+=||.+.||+|.++|+.||++ |+.|+|+|||+||+|||+.||+||++.. +
T Consensus 535 mypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi~gmtgdgvndapaLKkAdigiava~-a 612 (942)
T KOG0205|consen 535 MYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHIVGMTGDGVNDAPALKKADIGIAVAD-A 612 (942)
T ss_pred cCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-CceecccCCCcccchhhcccccceeecc-c
Confidence 268999999999999999999 9999999999999999999999999986 8
Q ss_pred cHHHHhhcCEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004479 688 SATAIAVADVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSC 731 (750)
Q Consensus 688 s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~ 731 (750)
+|.|+.+||+||+.+.++.+..++..||.++++++..-.++++.
T Consensus 613 tdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 613 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred hhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehh
Confidence 99999999999999999999999999999999999987777654
No 30
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.4e-63 Score=602.75 Aligned_cols=535 Identities=15% Similarity=0.145 Sum_probs=389.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccC
Q 004479 188 GGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVD 267 (750)
Q Consensus 188 ~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaD 267 (750)
-++++++..+++++|+|.++|+++.++ ++.++|++++ ++++++++||+|||+|+|++||+||||
T Consensus 143 L~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~~~~----------~~~~i~~~~i~vGDiv~v~~ge~iPaD 206 (1178)
T PLN03190 143 LAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVLVDD----------QFQEKKWKDIRVGEIIKIQANDTLPCD 206 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEEECC----------eEEEEeHHHCCCCCEEEECCCCEeeee
Confidence 356677778899999999999988653 5789999876 789999999999999999999999999
Q ss_pred cEEEe-----ceeeeeeccccCCcceEeeccCCcc-------------------------CCCceecc------------
Q 004479 268 CEVYQ-----GTATITIEHLTGEVKPLEAKVGDRI-------------------------PGGARNLD------------ 305 (750)
Q Consensus 268 g~vl~-----G~~~Vdes~LTGEs~pv~k~~g~~v-------------------------~aGt~~~~------------ 305 (750)
|+|++ |.++||||+|||||.|+.|.+++.. |.|++..+
T Consensus 207 ~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~l 286 (1178)
T PLN03190 207 MVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNII 286 (1178)
T ss_pred EEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCcccee
Confidence 99998 8899999999999999999876321 12222221
Q ss_pred ---------eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhh-------
Q 004479 306 ---------GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK------- 369 (750)
Q Consensus 306 ---------G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~------- 369 (750)
..+.+.|+++|.||. ++.....+..+++++|+.++++..+++.+.++++++++++..++..
T Consensus 287 lRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~ 363 (1178)
T PLN03190 287 LRGCELKNTAWAIGVAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363 (1178)
T ss_pred eccceecCCceEEEEEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 268899999999998 3333344556789999999999988888777777776665433211
Q ss_pred ---hcccc------c-----chh-hh---HHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHc----------CccccC
Q 004479 370 ---WSFIG------T-----SVC-RG---SVYRALGLMVAASPCALAVA-PLAYATAISSCARK----------GILLKG 420 (750)
Q Consensus 370 ---~~~~~------~-----~~~-~~---~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~----------gilvk~ 420 (750)
|+... . ..+ .. .+...+.++-..+|.+|.+. .+........+.+. ++.+|+
T Consensus 364 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~ 443 (1178)
T PLN03190 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRA 443 (1178)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceecc
Confidence 11000 0 000 01 12223445557899999774 55553323333322 367999
Q ss_pred chHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCcccccCCc-------------ccc--c-----------------
Q 004479 421 GQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT-------------HDI--S----------------- 468 (750)
Q Consensus 421 ~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~-------------~~~--~----------------- 468 (750)
.+..|+||+|++||+|||||||+|+|+++++.. +|..|..... ... .
T Consensus 444 snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i-~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1178)
T PLN03190 444 LNINEDLGQIKYVFSDKTGTLTENKMEFQCASI-WGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKS 522 (1178)
T ss_pred CcchhhhccceEEEEcCCCccccceEEEEEEEE-CCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhc
Confidence 999999999999999999999999999999964 2332221100 000 0
Q ss_pred cCCCcc---HHHHHHHHHHH--------h-----------cCCCCchHHHHHhhhcCCCC-------------------C
Q 004479 469 CCIPNC---EKEALAVAAAM--------E-----------KGTTHPIGRAVVDHSIGKDL-------------------P 507 (750)
Q Consensus 469 ~~~~~~---~~~~l~~~a~~--------e-----------~~s~hP~~~Ai~~~~~~~~~-------------------~ 507 (750)
...... ..+.+...+.+ + ..+.+|.+.|++.++...|+ .
T Consensus 523 ~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~ 602 (1178)
T PLN03190 523 GKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQR 602 (1178)
T ss_pred cccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceec
Confidence 000000 01222222211 1 12348999999999865543 1
Q ss_pred CccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccCh---hHHHHHHHHh-cccCCCCcEEEEeec--
Q 004479 508 SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSE---DESRKIKEAV-NGSSYGRGFVHAALS-- 581 (750)
Q Consensus 508 ~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~-- 581 (750)
...+..++|.+.|++|+++... +++++++++|||++.|+++|... ...++..+.. +....|.+++.++..
T Consensus 603 ~~il~~~pF~S~rKrMSvIv~~----~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l 678 (1178)
T PLN03190 603 FNVLGLHEFDSDRKRMSVILGC----PDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678 (1178)
T ss_pred ceeEEEecccccccEEEEEEEc----CCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeC
Confidence 1123356777888888887542 25678899999999999999742 1122222221 122335444433210
Q ss_pred -----------------------------------cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH
Q 004479 582 -----------------------------------VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ 626 (750)
Q Consensus 582 -----------------------------------~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~ 626 (750)
+-..+|+++++|++|++++++|++|++ +|+++||+|||+++||.
T Consensus 679 ~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi 757 (1178)
T PLN03190 679 NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRT-AGIKVWVLTGDKQETAI 757 (1178)
T ss_pred CHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHH
Confidence 011289999999999999999999999 89999999999999999
Q ss_pred HHHHHcCCc-----------------------------------------------------------------e-----
Q 004479 627 RVANAVGIN-----------------------------------------------------------------E----- 636 (750)
Q Consensus 627 ~iA~~~GI~-----------------------------------------------------------------~----- 636 (750)
+||++|||. +
T Consensus 758 ~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~ 837 (1178)
T PLN03190 758 SIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEE 837 (1178)
T ss_pred HHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHH
Confidence 999977661 0
Q ss_pred ------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCC
Q 004479 637 ------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNI 704 (750)
Q Consensus 637 ------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l 704 (750)
||||++|+||+++|+.+|+..+++|+|+|||+||+|||++|||||++.+.+..+|..+||+++ +.|
T Consensus 838 ~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI--~~F 915 (1178)
T PLN03190 838 QLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAM--GQF 915 (1178)
T ss_pred HHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccch--hhh
Confidence 699999999999999999874579999999999999999999999987666669999999999 789
Q ss_pred CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccccc
Q 004479 705 SGVPFCVA-KSRQTTSLVKQNVALALSCIILASLP-SVLGFLPLWLT 749 (750)
Q Consensus 705 ~~l~~~i~-~~R~~~~~i~~ni~~al~~~~~~~i~-~~~G~l~~~~a 749 (750)
+.|.+++. .||..|+++.+-+.|.+..|+++.++ +++++++.|.+
T Consensus 916 r~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg 962 (1178)
T PLN03190 916 RFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTL 962 (1178)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999987 69999999999999999999888777 67777766543
No 31
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-54 Score=474.96 Aligned_cols=478 Identities=20% Similarity=0.251 Sum_probs=343.4
Q ss_pred HHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEE
Q 004479 179 SIFMGN-SLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYIL 257 (750)
Q Consensus 179 a~~~g~-~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~ 257 (750)
-|.+.+ |+.+.+-++|+..-+.--.+++-|+...++.+ ...|.++.|.|++ +|+.+..+||.|||+|.
T Consensus 210 LWCLDeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v~R~k----------KW~~l~seeLlPgDvVS 278 (1160)
T KOG0209|consen 210 LWCLDEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINVYRNK----------KWVKLMSEELLPGDVVS 278 (1160)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEecC----------cceeccccccCCCceEE
Confidence 344444 45555555555444444456666666666655 3467788999987 89999999999999999
Q ss_pred EcC---CCccccCcEEEeceeeeeeccccCCcceEeecc-------------C----CccCCCceec-------------
Q 004479 258 VGA---GEAVPVDCEVYQGTATITIEHLTGEVKPLEAKV-------------G----DRIPGGARNL------------- 304 (750)
Q Consensus 258 v~~---Ge~VPaDg~vl~G~~~Vdes~LTGEs~pv~k~~-------------g----~~v~aGt~~~------------- 304 (750)
|.. ...||||.+++.|+|.|||++|||||.|..|.+ + ..+|+||.++
T Consensus 279 I~r~~ed~~vPCDllLL~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~p 358 (1160)
T KOG0209|consen 279 IGRGAEDSHVPCDLLLLRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTP 358 (1160)
T ss_pred eccCcccCcCCceEEEEecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCC
Confidence 977 668999999999999999999999999999986 1 2478999876
Q ss_pred ceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhcccccchhh----h
Q 004479 305 DGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWSFIGTSVCR----G 380 (750)
Q Consensus 305 ~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~~~~~~~~~----~ 380 (750)
+|.+...|++||.+|..|++++.+--...+-+.-. .+.| +|..+.+++|++.+ .+.|.- +..+.. .
T Consensus 359 Dggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn--~Etf--~FILFLlVFAiaAa-----~Yvwv~-Gskd~~RsrYK 428 (1160)
T KOG0209|consen 359 DGGCVAYVLRTGFETSQGKLVRTILFSAERVTANN--RETF--IFILFLLVFAIAAA-----GYVWVE-GSKDPTRSRYK 428 (1160)
T ss_pred CCCeEEEEEeccccccCCceeeeEEecceeeeecc--HHHH--HHHHHHHHHHHHhh-----heEEEe-cccCcchhhhh
Confidence 78899999999999999999987655443333211 1222 23333333333321 222321 111221 2
Q ss_pred HHHHHHHHHHhhhhhhhhh-HHHHHHHHHHHHHHcCccccCchHHHhhccccEEEEcCCCCCcCCceEEEEEEecCCccc
Q 004479 381 SVYRALGLMVAASPCALAV-APLAYATAISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHWI 459 (750)
Q Consensus 381 ~~~~al~vlv~a~P~aL~l-ap~a~~~~~~~~~~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~ 459 (750)
-+.-...++...+|.-||+ .++|+-.++..++|.||+|..+-.+.-.|++|..|||||||||+..|.|.++.-......
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~ 508 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG 508 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc
Confidence 2344555666778999999 499999999999999999999999999999999999999999999999999853221110
Q ss_pred ccCCccccccCCCccHHHHHHHHHHH---h-cCCCCchHHHHHhhhcC----CC---------CCCccccceeeecCCeE
Q 004479 460 RSKKTHDISCCIPNCEKEALAVAAAM---E-KGTTHPIGRAVVDHSIG----KD---------LPSVSIDRFEYFPGRGL 522 (750)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~l~~~a~~---e-~~s~hP~~~Ai~~~~~~----~~---------~~~~~~~~~~~~~g~g~ 522 (750)
...+.++. +...-.+|+-+.++ | .-..+|+++|.+++... .+ .+...+..|.+.+..++
T Consensus 509 ~~~~~s~~----p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKR 584 (1160)
T KOG0209|consen 509 ALTPASKA----PNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKR 584 (1160)
T ss_pred cccchhhC----CchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHH
Confidence 00001000 00112233333332 3 34579999999987621 11 12233567888888888
Q ss_pred EEEEeCeeeccCCCceeeeccCchHHHhhhccChhH-HHHHHHHhcccCCCCcEEEEeec--------------------
Q 004479 523 TATVNGIESGTEGGKELKASLGSVDFITSLCKSEDE-SRKIKEAVNGSSYGRGFVHAALS-------------------- 581 (750)
Q Consensus 523 ~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~-------------------- 581 (750)
|+++.+.+..-++.+++...||+||.+.++....+. .+++.... ..+|.++......
T Consensus 585 msvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~y--tR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEs 662 (1160)
T KOG0209|consen 585 MSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRY--TRQGSRVLALGYKPLGDMMVSQVRDLKREDVES 662 (1160)
T ss_pred HHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHH--hhccceEEEEecccccccchhhhhhhhhhhhhh
Confidence 888877665445567889999999999887654322 22222111 1234444332211
Q ss_pred cCceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------
Q 004479 582 VNEKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------- 636 (750)
Q Consensus 582 ~~~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------- 636 (750)
+-.+.|++.|.-|+|+|++++|++|++ ...+++|+||||+.||.+||+++||.+
T Consensus 663 dLtFaGFlif~CPlK~Ds~~~I~el~~-SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t 741 (1160)
T KOG0209|consen 663 DLTFAGFLIFSCPLKPDSKKTIKELNN-SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGT 741 (1160)
T ss_pred cceeeeeEEEeCCCCccHHHHHHHHhc-cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCc
Confidence 111389999999999999999999998 799999999999999999999999942
Q ss_pred --------------------------------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHH
Q 004479 637 --------------------------------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAP 672 (750)
Q Consensus 637 --------------------------------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDap 672 (750)
||||+.|.||..++..|++. |+.++|||||+||+.
T Consensus 742 ~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVG 820 (1160)
T KOG0209|consen 742 IVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVG 820 (1160)
T ss_pred eeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchh
Confidence 99999999999999999998 999999999999999
Q ss_pred HHHhCCccEEeCC
Q 004479 673 ALAAATVGIVLAQ 685 (750)
Q Consensus 673 AL~~AdVGIamg~ 685 (750)
|||+||||||+-.
T Consensus 821 ALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 821 ALKQAHVGVALLN 833 (1160)
T ss_pred hhhhcccceehhc
Confidence 9999999999754
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-51 Score=442.40 Aligned_cols=505 Identities=21% Similarity=0.209 Sum_probs=359.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCc
Q 004479 184 NSLEGGLLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEA 263 (750)
Q Consensus 184 ~~~~~~~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~ 263 (750)
+|...++++.+....++++++.+++.++..+ .+...++..+ .....|+++|++||+|.+..+++
T Consensus 131 y~~pl~fvl~itl~keavdd~~r~~rd~~~N------se~y~~ltr~----------~~~~~~Ss~i~vGDvi~v~K~~R 194 (1051)
T KOG0210|consen 131 YWGPLGFVLTITLIKEAVDDLKRRRRDRELN------SEKYTKLTRD----------GTRREPSSDIKVGDVIIVHKDER 194 (1051)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------hhhheeeccC----------CcccccccccccccEEEEecCCc
Confidence 3445567777788889999999888776544 3333444222 23344999999999999999999
Q ss_pred cccCcEEE-----eceeeeeeccccCCcceEeecc---------------------------------------------
Q 004479 264 VPVDCEVY-----QGTATITIEHLTGEVKPLEAKV--------------------------------------------- 293 (750)
Q Consensus 264 VPaDg~vl-----~G~~~Vdes~LTGEs~pv~k~~--------------------------------------------- 293 (750)
||||.+++ +|++.+-+..|+||+..+.|-|
T Consensus 195 VPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~L 274 (1051)
T KOG0210|consen 195 VPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESL 274 (1051)
T ss_pred CCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcc
Confidence 99999999 5789999999999998877632
Q ss_pred --CCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhc
Q 004479 294 --GDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFKWS 371 (750)
Q Consensus 294 --g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~~~ 371 (750)
.+.++++|++.+|.+...|.++|.||+- +.....++.+-..++..++.+.+++...+++++++...+-.+-
T Consensus 275 sventLWanTVvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~---- 347 (1051)
T KOG0210|consen 275 SVENTLWANTVVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG---- 347 (1051)
T ss_pred cccceeeeeeeEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----
Confidence 1347889999999999999999999872 2222234444456788889999988888888877764332221
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhhhh----HHHHHHHHHHHHH-HcCccccCchHHHhhccccEEEEcCCCCCcCCce
Q 004479 372 FIGTSVCRGSVYRALGLMVAASPCALAV----APLAYATAISSCA-RKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 446 (750)
Q Consensus 372 ~~~~~~~~~~~~~al~vlv~a~P~aL~l----ap~a~~~~~~~~~-~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~ 446 (750)
+.|...++|++.++...+|..|-+ +.+.+.--+++-. -.|.++|+...-|+||++.++.+|||||||+|+|
T Consensus 348 ----~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM 423 (1051)
T KOG0210|consen 348 ----SDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEM 423 (1051)
T ss_pred ----CchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchh
Confidence 234556889999999999999854 2222332333222 2578999999999999999999999999999999
Q ss_pred EEEEEEecCCcccccCC-----------cc----c----cc---cCCCcc-HHHH--HHHHHHH----h------cCCCC
Q 004479 447 MFKAIEPIYGHWIRSKK-----------TH----D----IS---CCIPNC-EKEA--LAVAAAM----E------KGTTH 491 (750)
Q Consensus 447 ~v~~i~~~~~~~~~~~~-----------~~----~----~~---~~~~~~-~~~~--l~~~a~~----e------~~s~h 491 (750)
++++++.. ...+..+. +. . .. ...+.. .+.+ |+++... | .+..+
T Consensus 424 ~~KKiHLG-Tv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaS 502 (1051)
T KOG0210|consen 424 EFKKIHLG-TVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAAS 502 (1051)
T ss_pred eeeeeeee-eeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCC
Confidence 99999742 11111000 00 0 00 000000 1112 2222211 1 23446
Q ss_pred chHHHHHhhhcCCCC--------------------CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhh
Q 004479 492 PIGRAVVDHSIGKDL--------------------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITS 551 (750)
Q Consensus 492 P~~~Ai~~~~~~~~~--------------------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~ 551 (750)
|.+-||+++-+..|+ ......-|++.+..++|+.+...+ ..+++..|.||++-.|..
T Consensus 503 PDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e---~~~evtfylKGAD~VMs~ 579 (1051)
T KOG0210|consen 503 PDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDE---TTEEVTFYLKGADVVMSG 579 (1051)
T ss_pred CCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecC---CCceEEEEEecchHHHhc
Confidence 999999988643221 111223466667777788776543 257888899999887765
Q ss_pred hccChhHHHHHHHHhcccCCCCcEEEEe-------------------------------------ec-cCceEEEEEecC
Q 004479 552 LCKSEDESRKIKEAVNGSSYGRGFVHAA-------------------------------------LS-VNEKVTLIHLED 593 (750)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------------------------~~-~~~~lG~i~~~D 593 (750)
.....+..++.. .+..-.|.+...++ +. +-+.+|+.++||
T Consensus 580 iVq~NdWleEE~--gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 580 IVQYNDWLEEEC--GNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred ccccchhhhhhh--hhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 443322111000 00001122211111 00 112389999999
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
+++++++.+++.||+ ||+++||||||+.+||+.||+..++..
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~ 736 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGE 736 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCc
Confidence 999999999999999 899999999999999999999999852
Q ss_pred -----------------------EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHh
Q 004479 637 -----------------------VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIA 693 (750)
Q Consensus 637 -----------------------v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~ 693 (750)
|+||++|+||+++++.+|++.|++|+.+|||.||..|+++||+||++-+++..+|.-
T Consensus 737 Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL 816 (1051)
T KOG0210|consen 737 SLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL 816 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccch
Confidence 899999999999999999987999999999999999999999999988888899999
Q ss_pred hcCEEEecCCCCCHHHHHHH-HHHHHHHHHHH
Q 004479 694 VADVLLLRNNISGVPFCVAK-SRQTTSLVKQN 724 (750)
Q Consensus 694 aADivL~~~~l~~l~~~i~~-~R~~~~~i~~n 724 (750)
+||+.+ ..|+.+.+++.+ ||..|++--+-
T Consensus 817 AADfSI--tqF~Hv~rLLl~HGR~SYkrsa~l 846 (1051)
T KOG0210|consen 817 AADFSI--TQFSHVSRLLLWHGRNSYKRSAKL 846 (1051)
T ss_pred hccccH--HHHHHHHHHhhccccchHHHHHHH
Confidence 999999 579999999886 99888765443
No 33
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.7e-48 Score=456.09 Aligned_cols=532 Identities=17% Similarity=0.202 Sum_probs=379.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 190 LLLAMFNLAHIAEEFFTSRAMVDVKELKENYPDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 190 ~i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++....+.+.+|+|.++++++.++ ..+++|.++++ .+++..|++|++||+|.+..++.+|||.+
T Consensus 89 ~vl~~t~iKd~~eD~rR~~~D~~iN------~~~~~v~~~~~---------~~~~~~wk~~~vGd~v~v~~~~~~paD~l 153 (1151)
T KOG0206|consen 89 FVLGITAIKDAIEDYRRHKQDKEVN------NRKVEVLRGDG---------CFVEKKWKDVRVGDIVRVEKDEFVPADLL 153 (1151)
T ss_pred eeehHHHHHHHHhhhhhhhccHHhh------cceeEEecCCc---------eeeeeccceeeeeeEEEeccCCccccceE
Confidence 4556667889999999999988765 45678887642 48899999999999999999999999999
Q ss_pred EEe-----ceeeeeeccccCCcceEeeccC-----------------------------------------------Ccc
Q 004479 270 VYQ-----GTATITIEHLTGEVKPLEAKVG-----------------------------------------------DRI 297 (750)
Q Consensus 270 vl~-----G~~~Vdes~LTGEs~pv~k~~g-----------------------------------------------~~v 297 (750)
+++ |.|+|++++|+||+..+.|+.- ..+
T Consensus 154 lLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~L 233 (1151)
T KOG0206|consen 154 LLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLL 233 (1151)
T ss_pred EecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcc
Confidence 994 5689999999999999888630 012
Q ss_pred CCCceecc-eeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhh-------
Q 004479 298 PGGARNLD-GRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSLAIALIGPFLFK------- 369 (750)
Q Consensus 298 ~aGt~~~~-G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~~~a~~~~~~vl~~a~~~~ii~~~~~~------- 369 (750)
+-|+...+ -.+...|+.+|.+|.+ ++....+..++++++|..+++...++.+++.++++.++...++..
T Consensus 234 lrg~~lrNT~~v~G~vv~tG~dtK~---~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 310 (1151)
T KOG0206|consen 234 LRGSRLRNTEWVYGVVVFTGHDTKL---MQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG 310 (1151)
T ss_pred cCCceeccCcEEEEEEEEcCCcchH---HHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC
Confidence 22444443 3577889999999985 445556888899999999999888888888887777665433322
Q ss_pred -hcccccch----hhhHHHHHHHHHHhhhhhhhhhH-H---HHHHHHHH---HHH----HcCccccCchHHHhhccccEE
Q 004479 370 -WSFIGTSV----CRGSVYRALGLMVAASPCALAVA-P---LAYATAIS---SCA----RKGILLKGGQVLDALASCHTI 433 (750)
Q Consensus 370 -~~~~~~~~----~~~~~~~al~vlv~a~P~aL~la-p---~a~~~~~~---~~~----~~gilvk~~~~lE~lg~v~~i 433 (750)
|++..... ....+..++.++...+|..|.+. - .....-+. .|. .....+|+.+..|.||++++|
T Consensus 311 ~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yI 390 (1151)
T KOG0206|consen 311 EWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYI 390 (1151)
T ss_pred chhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEE
Confidence 11221111 11234445556666788888542 2 11111111 222 357789999999999999999
Q ss_pred EEcCCCCCcCCceEEEEEEecCCcccccCCc------------------------cccc------c--CCCccHHHHHHH
Q 004479 434 AFDKTGTLTTGGLMFKAIEPIYGHWIRSKKT------------------------HDIS------C--CIPNCEKEALAV 481 (750)
Q Consensus 434 ~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~------------------------~~~~------~--~~~~~~~~~l~~ 481 (750)
+.|||||||+|.|++.++.. +|..|..... .+.. . ....+..+....
T Consensus 391 fSDKTGTLT~N~M~F~kCsi-~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~ 469 (1151)
T KOG0206|consen 391 FSDKTGTLTQNSMEFKKCSI-NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRA 469 (1151)
T ss_pred EEcCcCccccceeeeecccc-cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhH
Confidence 99999999999999999964 3433322110 0000 0 011111122222
Q ss_pred HHH--------------HhcCCCCchHHHHHhhhcCCCCCCcc-------------------ccceeeecCCeEEEEEeC
Q 004479 482 AAA--------------MEKGTTHPIGRAVVDHSIGKDLPSVS-------------------IDRFEYFPGRGLTATVNG 528 (750)
Q Consensus 482 ~a~--------------~e~~s~hP~~~Ai~~~~~~~~~~~~~-------------------~~~~~~~~g~g~~~~v~~ 528 (750)
.+. +...+..|.+.|++..+++.++.... ..-.++.+.|++|+++..
T Consensus 470 la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR 549 (1151)
T KOG0206|consen 470 LALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVR 549 (1151)
T ss_pred HhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEE
Confidence 221 12235689999999998654431110 111234556777777655
Q ss_pred eeeccCCCceeeeccCchHHHhhhccChhH--HHH-HHHHhcccCCCCcEEEEee----------------------c--
Q 004479 529 IESGTEGGKELKASLGSVDFITSLCKSEDE--SRK-IKEAVNGSSYGRGFVHAAL----------------------S-- 581 (750)
Q Consensus 529 ~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~----------------------~-- 581 (750)
. +++++.+|+||++..|.+++..... .++ ..+.......|.+..+++. .
T Consensus 550 ~----p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~R 625 (1151)
T KOG0206|consen 550 D----PDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDR 625 (1151)
T ss_pred c----CCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCH
Confidence 3 3679999999999999998874211 010 0111111122222211110 0
Q ss_pred ----------cC---ceEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------
Q 004479 582 ----------VN---EKVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------ 636 (750)
Q Consensus 582 ----------~~---~~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------ 636 (750)
.+ ..+|..++||+++++++++|+.|++ ||||+||||||+.+||.+||..|++.+
T Consensus 626 e~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~-AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~ 704 (1151)
T KOG0206|consen 626 EELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQ-AGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTET 704 (1151)
T ss_pred HHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHH-cCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCC
Confidence 01 1289999999999999999999999 899999999999999999999998731
Q ss_pred --------------------------------------------------------------------EEecCCHhhHHH
Q 004479 637 --------------------------------------------------------------------VYCSLKPEDKLN 648 (750)
Q Consensus 637 --------------------------------------------------------------------v~a~~~P~~K~~ 648 (750)
++||++|.||+.
T Consensus 705 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~ 784 (1151)
T KOG0206|consen 705 SEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKAL 784 (1151)
T ss_pred hhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHH
Confidence 899999999999
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH-HHHHHHHHHHHHHHH
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA-KSRQTTSLVKQNVAL 727 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~ni~~ 727 (750)
+|+..++..+..++.||||.||.+|+++|||||++++.+..+|..+||+.+ ..|+-+.+++. .||..|.++.+.+.+
T Consensus 785 Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLVHGhW~Y~R~a~~ily 862 (1151)
T KOG0206|consen 785 VVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLVHGHWSYIRLAKMILY 862 (1151)
T ss_pred HHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhheeecceeHHHHHHHHHH
Confidence 999998766899999999999999999999999999999999999999999 56777777655 599999999999999
Q ss_pred HHHHHHHHHHH-HHhhccccc
Q 004479 728 ALSCIILASLP-SVLGFLPLW 747 (750)
Q Consensus 728 al~~~~~~~i~-~~~G~l~~~ 747 (750)
.+..|+.+.+. +++.+.+.+
T Consensus 863 fFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 863 FFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred HHHHHHHHHHHHHHhhhcCCC
Confidence 99998877655 566655543
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=4.2e-35 Score=301.43 Aligned_cols=220 Identities=27% Similarity=0.421 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcE
Q 004479 191 LLAMFNLAHIAEEFFTSRAMVDVKELKENYPDS-VLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCE 269 (750)
Q Consensus 191 i~~~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~-~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~ 269 (750)
+++++.++.+++.+.++|+++.++++.+..+++ ++|+|++ ++++++++||+|||+|.+++||++||||+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~----------~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ 71 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDG----------RWQKIPSSELVPGDIIILKAGDIVPADGI 71 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETT----------EEEEEEGGGT-TTSEEEEETTEBESSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecc----------ccccchHhhccceeeeecccccccccCcc
Confidence 566777888899999999999999999988887 8899987 89999999999999999999999999999
Q ss_pred EEe-ceeeeeeccccCCcceEeec-----cCCccCCCceecceeEEEEEEEeccccHHHHHHHHHHHhhcCCchhHHHHH
Q 004479 270 VYQ-GTATITIEHLTGEVKPLEAK-----VGDRIPGGARNLDGRMILKATKTWNESTLNRIVQLTEEAQLNKPKLQRWLD 343 (750)
Q Consensus 270 vl~-G~~~Vdes~LTGEs~pv~k~-----~g~~v~aGt~~~~G~~~v~v~~~g~~t~~~~i~~~v~~a~~~k~~~q~~~~ 343 (750)
|++ |.+.||||.+|||+.|+.|. +|+.+|+||.+.+|.+.++|+++|.+|..+++.+.+.+++.+++++++.++
T Consensus 72 ll~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 72 LLESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EEESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred ceeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999 99999999999999999999 999999999999999999999999999999999999999988899999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHhhhhhhhcc-cccchhhhHHHHHHHHHHhhhhhhhhhH-HHHHHHHHHHHHHcCccccCc
Q 004479 344 EFGEQYSKVVVVLSLAIALIGPFLFKWSF-IGTSVCRGSVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGG 421 (750)
Q Consensus 344 ~~a~~~~~~vl~~a~~~~ii~~~~~~~~~-~~~~~~~~~~~~al~vlv~a~P~aL~la-p~a~~~~~~~~~~~gilvk~~ 421 (750)
++..++.+++++++++++++. .+ ....++...+..++++++.+|||+|+++ |+++..++.+++++|+++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIW------FFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------HTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred HHHHHHHhcccccchhhhccc------eecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 999999998887777664332 11 2234566789999999999999999997 999999999999999999999
Q ss_pred hHHHh
Q 004479 422 QVLDA 426 (750)
Q Consensus 422 ~~lE~ 426 (750)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.96 E-value=3.8e-30 Score=261.11 Aligned_cols=209 Identities=40% Similarity=0.632 Sum_probs=164.3
Q ss_pred ccEEEEcCCCCCcCCceEEEEEEecCCcccccCCccccccCCCccHHHHHHHHHHHhcCCCCchHHHHHhhhcCCCCCCc
Q 004479 430 CHTIAFDKTGTLTTGGLMFKAIEPIYGHWIRSKKTHDISCCIPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPSV 509 (750)
Q Consensus 430 v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~e~~s~hP~~~Ai~~~~~~~~~~~~ 509 (750)
|++||||||||||+|++.+ .+ .+....+.++...+..+.||++.+++.++...... .
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~-------------------~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~ 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP-------------------PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-K 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES-------------------CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEecCCCcccCeEEE---Ee-------------------ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-h
Confidence 6899999999999999998 11 12678889999999999999999999887542111 1
Q ss_pred cccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccChhHHHHHHHHhcccCCCCcEEEEeeccCceEEEE
Q 004479 510 SIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNGSSYGRGFVHAALSVNEKVTLI 589 (750)
Q Consensus 510 ~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lG~i 589 (750)
.+.+|....++|..+.+.+. +. |+++++.+............... ...+...+..+. ....+|.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~-----------~~-g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~ 122 (215)
T PF00702_consen 58 SLESFSEFIGRGISGDVDGI-----------YL-GSPEWIHELGIRVISPDLVEEIQ--ESQGRTVIVLAV-NLIFLGLF 122 (215)
T ss_dssp CCEEEEEETTTEEEEEEHCH-----------EE-HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHCEEEEE-SHEEEEEE
T ss_pred hhhhheeeeecccccccccc-----------cc-ccchhhhhccccccccchhhhHH--HhhCCcccceee-cCeEEEEE
Confidence 16789999999999988762 23 88888876544321111111100 111222233221 34458999
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC--CHhhH--HHHHHHHHhhcCCeEEE
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL--KPEDK--LNHVKRTSRDMGGGLIM 663 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~--~P~~K--~~~V~~l~~~~g~~Vam 663 (750)
.+.|++||+++++|++|++ .|++++|+|||+..+|.++++++||.+ +|+++ +|++| .++++.|+.+ ++.|+|
T Consensus 123 ~~~d~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~ 200 (215)
T PF00702_consen 123 GLRDPLRPGAKEALQELKE-AGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVK-PGEVAM 200 (215)
T ss_dssp EEEEEBHTTHHHHHHHHHH-TTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCT-GGGEEE
T ss_pred eecCcchhhhhhhhhhhhc-cCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcC-CCEEEE
Confidence 9999999999999999999 699999999999999999999999987 99999 99999 9999999966 569999
Q ss_pred EcCCccCHHHHHhCC
Q 004479 664 VGEGINDAPALAAAT 678 (750)
Q Consensus 664 vGDG~NDapAL~~Ad 678 (750)
||||+||++|+++||
T Consensus 201 vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 201 VGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSGGHHHHHHHSS
T ss_pred EccCHHHHHHHHhCc
Confidence 999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.67 E-value=3.1e-16 Score=138.31 Aligned_cols=112 Identities=30% Similarity=0.432 Sum_probs=100.4
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEecCCHhhHHHHHHHHHhhcCCeEE
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCSLKPEDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~~~P~~K~~~V~~l~~~~g~~Va 662 (750)
..+.++-.-++=++++++|++|++ . +++++.|||...+-...|+-+||+ ++++..-|+.|.+++++|++. +++|.
T Consensus 21 v~~tiatgGklf~ev~e~iqeL~d-~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~-~~k~v 97 (152)
T COG4087 21 VLYTIATGGKLFSEVSETIQELHD-M-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVV 97 (152)
T ss_pred EEEEEccCcEEcHhhHHHHHHHHH-h-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCC-CcEEE
Confidence 366777778888999999999998 4 999999999999999999999996 699999999999999999988 89999
Q ss_pred EEcCCccCHHHHHhCCccEEeCC--CCcHHHHhhcCEEE
Q 004479 663 MVGEGINDAPALAAATVGIVLAQ--RASATAIAVADVLL 699 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIamg~--~~s~~A~~aADivL 699 (750)
|||||+||.+||++||+||..=+ +...-+.++||+++
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi 136 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh
Confidence 99999999999999999997432 23445679999998
No 37
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.15 E-value=1.6e-10 Score=116.04 Aligned_cols=116 Identities=17% Similarity=0.234 Sum_probs=96.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe--------c-------CCHhhHHHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC--------S-------LKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a--------~-------~~P~~K~~~V~~l~~~~g 658 (750)
+++|++.+.|+.||+ .+ ++.++||-....+..+++++|++++|+ + ..|++|...++.+++. |
T Consensus 68 ~l~pga~ell~~lk~-~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~-~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRE-RF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL-Y 144 (203)
T ss_pred CCCccHHHHHHHHHh-CC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh-C
Confidence 689999999999998 45 999999999999999999999998776 2 4578999999999876 7
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~ 714 (750)
..+.|+|||.||.||++.||+||++.. .+..++.||=.=.-.+.+.+..++..+
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~a--k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFHA--PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEecC--CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 789999999999999999999999985 455555554433335667777776665
No 38
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.05 E-value=9.9e-10 Score=117.67 Aligned_cols=116 Identities=19% Similarity=0.364 Sum_probs=100.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
++.|++.+.++.|++ .|+++.++||.....+..+.+++|++.++++ +..+.|.+.++.+.++
T Consensus 181 ~l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~ 259 (322)
T PRK11133 181 PLMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE 259 (322)
T ss_pred CCChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence 588999999999999 6999999999999899999999999876652 2356899999998876
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
.| ..+.++|||.||.+|++.|++||||. +.+..++.||.++-..++..+..++.
T Consensus 260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~n--Akp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 260 YEIPLAQTVAIGDGANDLPMIKAAGLGIAYH--AKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCCChhhEEEEECCHHHHHHHHHCCCeEEeC--CCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 44 57999999999999999999999994 67888999999998888888877653
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.98 E-value=1.4e-09 Score=110.75 Aligned_cols=114 Identities=20% Similarity=0.368 Sum_probs=96.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
+++|++++.++.|++ .|+++.++||.....+..+.+.+|+..+|+. ..+..|..+++.+.++
T Consensus 85 ~~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 85 PLTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CcCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 589999999999999 5999999999999999999999999887752 1234488888877665
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
.| ..+.|+||+.||.+|++.|+++++++ +.+..++.||.+|.+++|..+..+
T Consensus 164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 164 EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 23 35889999999999999999999996 467788999999999988776543
No 40
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.87 E-value=2.4e-08 Score=95.85 Aligned_cols=109 Identities=17% Similarity=0.268 Sum_probs=89.5
Q ss_pred eEEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeE
Q 004479 585 KVTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGL 661 (750)
Q Consensus 585 ~lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~V 661 (750)
.++.+.+.|.. +|++|++ .|+++.++||+....+..+.+++|+..+|... ..|.+.++.+.++.| +.+
T Consensus 25 ~~~~~~~~~~~------~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~--~~k~~~~~~~~~~~~~~~~~~ 95 (154)
T TIGR01670 25 EIKAFNVRDGY------GIRCALK-SGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ--SNKLIAFSDILEKLALAPENV 95 (154)
T ss_pred EEEEEechhHH------HHHHHHH-CCCEEEEEECCCCHHHHHHHHHcCCCEEEecc--cchHHHHHHHHHHcCCCHHHE
Confidence 35555555442 8999999 59999999999999999999999999887765 456777777765423 579
Q ss_pred EEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
.|+||+.||.++++.|.+++++.. +.+..+..||+++..+.
T Consensus 96 ~~vGDs~~D~~~~~~ag~~~~v~~-~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 96 AYIGDDLIDWPVMEKVGLSVAVAD-AHPLLIPRADYVTRIAG 136 (154)
T ss_pred EEECCCHHHHHHHHHCCCeEecCC-cCHHHHHhCCEEecCCC
Confidence 999999999999999999999986 66788889999996554
No 41
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.8e-08 Score=100.35 Aligned_cols=104 Identities=27% Similarity=0.417 Sum_probs=86.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----------------Eec-CCHhhHHHHHHHHHh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----------------YCS-LKPEDKLNHVKRTSR 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----------------~a~-~~P~~K~~~V~~l~~ 655 (750)
.+++|++.+.++.+|+ .|.+|+++||-...-+..+|+++|++.+ ... +..+.|.+.++++.+
T Consensus 76 ~~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 6899999999999999 6999999999999999999999999742 222 344789999988887
Q ss_pred hcCCe---EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEE
Q 004479 656 DMGGG---LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLL 699 (750)
Q Consensus 656 ~~g~~---VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL 699 (750)
..|.. +.++|||.||.|+|+.|+.+++++.. ..-...|+...
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~--~~l~~~a~~~~ 199 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK--PKLRALADVRI 199 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC--HHHHHHHHHhc
Confidence 54554 89999999999999999999999853 33444455544
No 42
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.75 E-value=6.3e-08 Score=94.00 Aligned_cols=101 Identities=14% Similarity=0.174 Sum_probs=83.2
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
..|+.|++ .|+++.++|+.+...++.+.+.+|+..+|....| |.+.++.+.++.| ..++|+||+.||.++++.|
T Consensus 41 ~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~a 117 (169)
T TIGR02726 41 MGVIVLQL-CGIDVAIITSKKSGAVRHRAEELKIKRFHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRV 117 (169)
T ss_pred HHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCCCcEEEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHC
Confidence 57889999 6999999999999999999999999998887643 3444554444323 5699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEecCCCC
Q 004479 678 TVGIVLAQRASATAIAVADVLLLRNNIS 705 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~~~~l~ 705 (750)
+++++|+. +.+..++.||+|...++=.
T Consensus 118 g~~~am~n-A~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 118 GLAVAVGD-AVADVKEAAAYVTTARGGH 144 (169)
T ss_pred CCeEECcC-chHHHHHhCCEEcCCCCCC
Confidence 99999996 7788899999988654433
No 43
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.70 E-value=6.6e-08 Score=97.42 Aligned_cols=112 Identities=20% Similarity=0.370 Sum_probs=89.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec---------------CCHhhHHHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------------LKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------------~~P~~K~~~V~~l~~~~g 658 (750)
++.|++.+.++.|++ . +++.++|+-....+..+.+++|+.++|+. ..|+.|...++.++.. +
T Consensus 68 ~~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~-~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSL-G 144 (205)
T ss_pred CCCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHh-C
Confidence 468999999999998 6 89999999999999999999999765432 2578899999988877 7
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCE-EEecCCCCCHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADV-LLLRNNISGVPFCV 711 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADi-vL~~~~l~~l~~~i 711 (750)
..+.|||||.||.++.+.|++|+..+. ..+...+.++. ++ +++..+...+
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFRP-PANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEECC-CHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999999999999999999875 33333445565 33 4555554443
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.66 E-value=9.7e-08 Score=94.47 Aligned_cols=96 Identities=18% Similarity=0.279 Sum_probs=83.0
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
.+|+.|++ .|+++.++||.....+..+++++|+..+|.. .++|...++.+.++.| ..++||||+.||.++++.|
T Consensus 55 ~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~a 131 (183)
T PRK09484 55 YGIRCLLT-SGIEVAIITGRKSKLVEDRMTTLGITHLYQG--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKV 131 (183)
T ss_pred HHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCceeecC--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHC
Confidence 68999998 5999999999999999999999999988874 3568888877766534 4699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEe
Q 004479 678 TVGIVLAQRASATAIAVADVLLL 700 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~ 700 (750)
.++++++. +.+..+..||+++-
T Consensus 132 G~~~~v~~-~~~~~~~~a~~v~~ 153 (183)
T PRK09484 132 GLSVAVAD-AHPLLLPRADYVTR 153 (183)
T ss_pred CCeEecCC-hhHHHHHhCCEEec
Confidence 99999875 66778888999984
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.64 E-value=1.8e-07 Score=95.07 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=94.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
++.+++.++|++|++ .|+++++.||-+...+..++++++++.
T Consensus 18 ~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 18 MISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred ccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 488999999999999 699999999999999999999999851
Q ss_pred ----------------------------------------EEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCH
Q 004479 637 ----------------------------------------VYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDA 671 (750)
Q Consensus 637 ----------------------------------------v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDa 671 (750)
.+.+++| -+|...++.+.+..| ..++++||+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 1123233 367777777766433 3599999999999
Q ss_pred HHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 672 PALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 672 pAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
+|++.|+.|++|++ +.+..++.||++..+++=.++.++
T Consensus 177 ~ml~~ag~~vam~n-a~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 177 DLFRVVGFKVAVAN-ADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHHhCCCeEEcCC-ccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999996 889999999999977666666554
No 46
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.60 E-value=2.1e-07 Score=93.23 Aligned_cols=101 Identities=23% Similarity=0.363 Sum_probs=82.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----------------CCHhhHHHHHHHHHhh
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----------------LKPEDKLNHVKRTSRD 656 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----------------~~P~~K~~~V~~l~~~ 656 (750)
+++|++.+.++.|++ .|+++.++|+-....+..+.+.+|+..+|+. ..|..|.+.++.+.++
T Consensus 80 ~~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~ 158 (201)
T TIGR01491 80 SLRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE 158 (201)
T ss_pred CCCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence 589999999999999 5999999999999999999999999876642 2345677787777654
Q ss_pred cC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC
Q 004479 657 MG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD 696 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD 696 (750)
.| +.+.|+||+.||.++++.|+++++++.. ......++|
T Consensus 159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~-~~~~~~a~~ 200 (201)
T TIGR01491 159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDE-GHADYLAKD 200 (201)
T ss_pred hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC-ccchhhccc
Confidence 22 3599999999999999999999999763 334555555
No 47
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.60 E-value=2.9e-07 Score=94.46 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=92.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------------------------------------
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-------------------------------------- 636 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 636 (750)
+.+.+.++|++|++ .|+++++.||-....+..+.+++|+..
T Consensus 21 i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 21 LSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred cCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 78999999999999 699999999999999999999999851
Q ss_pred -----------------------------------------------EEecCCHhh--HHHHHHHHHhhcC---CeEEEE
Q 004479 637 -----------------------------------------------VYCSLKPED--KLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 637 -----------------------------------------------v~a~~~P~~--K~~~V~~l~~~~g---~~Vamv 664 (750)
.+.+..|.. |..-++.+.+..| ..++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001122221 4444444444322 358999
Q ss_pred cCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 665 GEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 665 GDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
||+.||.+|++.|++|++|++ +.+..++.||++..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~N-a~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVAN-ADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEecC-ccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999996 88999999999998888888887764
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.54 E-value=5.5e-07 Score=94.59 Aligned_cols=117 Identities=21% Similarity=0.384 Sum_probs=96.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------------------------------------
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-------------------------------------- 636 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 636 (750)
+.+.++++|+++++ .|+++++.||-....+..+.+++|+..
T Consensus 21 i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 21 ISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred cCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 89999999999999 599999999999999999999999961
Q ss_pred -------------------------------------------------------------------------------E
Q 004479 637 -------------------------------------------------------------------------------V 637 (750)
Q Consensus 637 -------------------------------------------------------------------------------v 637 (750)
.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 0
Q ss_pred EecCCHh--hHHHHHHHHHhhcCCe---EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 638 YCSLKPE--DKLNHVKRTSRDMGGG---LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 638 ~a~~~P~--~K~~~V~~l~~~~g~~---VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+-+..|. +|..-++.+.+..|-. |+++||+.||.+||+.|+.|+|||. +.+.+++.||++...++=.++..+++
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N-a~~~~k~~A~~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN-ADEELKELADYVTTSNDEDGVAEALE 258 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC-CCHHHHhhCCcccCCccchHHHHHHH
Confidence 0122222 3555566666644544 9999999999999999999999997 69999999998888888888888776
Q ss_pred H
Q 004479 713 K 713 (750)
Q Consensus 713 ~ 713 (750)
.
T Consensus 259 ~ 259 (264)
T COG0561 259 K 259 (264)
T ss_pred H
Confidence 4
No 49
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.50 E-value=9.1e-07 Score=93.21 Aligned_cols=53 Identities=25% Similarity=0.391 Sum_probs=48.0
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
..|+++|||.||.+||+.|+.|+||++ +.+..++.||+|..+++=.++.++++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~N-A~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGN-AIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecC-ccHHHHHhcCeeccCCCcchHHHHHH
Confidence 469999999999999999999999996 89999999999998888888887774
No 50
>PLN02954 phosphoserine phosphatase
Probab=98.48 E-value=8.4e-07 Score=90.71 Aligned_cols=113 Identities=20% Similarity=0.361 Sum_probs=86.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEec-------------------CCHhhHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCS-------------------LKPEDKLNHVKR 652 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~-------------------~~P~~K~~~V~~ 652 (750)
+++|++++.++.|++ .|+++.++||.....+..+.+.+|+. ++|+. ..+..|.+.++.
T Consensus 84 ~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 84 RLSPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 478999999999999 59999999999999999999999996 46642 112458888888
Q ss_pred HHhhcC-CeEEEEcCCccCHHHHHh--CCccEEeCCCC-cHHHHhhcCEEEecCCCCCHHH
Q 004479 653 TSRDMG-GGLIMVGEGINDAPALAA--ATVGIVLAQRA-SATAIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 653 l~~~~g-~~VamvGDG~NDapAL~~--AdVGIamg~~~-s~~A~~aADivL~~~~l~~l~~ 709 (750)
++++.| ..+.|+||+.||..|.++ ++++++.|... .+.....+|+++ +++..+..
T Consensus 163 ~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 163 IKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred HHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 876533 468999999999999777 57777766422 233345689988 45555544
No 51
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.48 E-value=1.9e-07 Score=89.04 Aligned_cols=91 Identities=21% Similarity=0.389 Sum_probs=77.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC-------------------CHhhHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL-------------------KPEDKLNHVKR 652 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~-------------------~P~~K~~~V~~ 652 (750)
++-|++++.+..|+++ |.++.++||--..-+..||.++||+. +||+. ....|.++++.
T Consensus 88 ~lT~Gi~eLv~~L~~~-~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHAR-GTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred ccCCCHHHHHHHHHHc-CCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 4679999999999995 99999999999999999999999985 66653 23569999999
Q ss_pred HHhh-cCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 653 TSRD-MGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 653 l~~~-~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
+++. .-+.++|||||.||.+|++.||-=|+.|+
T Consensus 167 lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 167 LRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGG 200 (227)
T ss_pred HHhCCChheeEEecCCccccccCCchhhhhccCC
Confidence 9874 23679999999999999999887777664
No 52
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.48 E-value=6e-07 Score=94.77 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=45.4
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCE--EEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADV--LLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADi--vL~~~~l~~l~~~i~ 712 (750)
..|+.+|||-||.+||+.|+.|+|||+ +.+.+++.||. +..+++=.++.++++
T Consensus 205 ~~v~afGD~~NDi~Ml~~ag~~vAm~N-a~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 205 ADCMAFGDAMNDREMLGSVGRGFIMGN-AMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred HHeEEecCCHHHHHHHHHcCCceeccC-ChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 469999999999999999999999996 88999999996 555667777777664
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.46 E-value=1.3e-06 Score=89.33 Aligned_cols=116 Identities=19% Similarity=0.275 Sum_probs=93.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
.+.+.+.++|++|++ .|+++++.||-+...+..+.+++|+..
T Consensus 15 ~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 15 AINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred ccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 477899999999999 699999999999999999999999631
Q ss_pred --------------------------------------E-------EecCCH--hhHHHHHHHHHhhcC---CeEEEEcC
Q 004479 637 --------------------------------------V-------YCSLKP--EDKLNHVKRTSRDMG---GGLIMVGE 666 (750)
Q Consensus 637 --------------------------------------v-------~a~~~P--~~K~~~V~~l~~~~g---~~VamvGD 666 (750)
+ +.+..| -.|..-++.+.++.| ..++++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0 112223 257777777765433 46999999
Q ss_pred CccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCC----HHHHH
Q 004479 667 GINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISG----VPFCV 711 (750)
Q Consensus 667 G~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~----l~~~i 711 (750)
+.||.+|++.|++|+||++ +.+..++.||.|..+++-.+ +...+
T Consensus 174 ~~NDi~m~~~ag~~vam~N-a~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVAN-AQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred CHhhHHHHHhcCceEEcCC-hhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 9999999999999999996 88899999999987777777 55544
No 54
>PRK10976 putative hydrolase; Provisional
Probab=98.42 E-value=1.2e-06 Score=91.97 Aligned_cols=53 Identities=25% Similarity=0.342 Sum_probs=44.9
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC--EEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD--VLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD--ivL~~~~l~~l~~~i~ 712 (750)
..|+++|||.||.+||+.|+.|+||++ +.+..++.|| .|..+++=.++.++++
T Consensus 207 ~~viafGD~~NDi~Ml~~ag~~vAm~N-A~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 207 KDCIAFGDGMNDAEMLSMAGKGCIMGN-AHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHeEEEcCCcccHHHHHHcCCCeeecC-CcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 459999999999999999999999996 8999999988 6666666667776664
No 55
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.38 E-value=8.1e-07 Score=88.23 Aligned_cols=77 Identities=29% Similarity=0.500 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--EEecC-------------CHh-h--HHHHHHHH-----
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--VYCSL-------------KPE-D--KLNHVKRT----- 653 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--v~a~~-------------~P~-~--K~~~V~~l----- 653 (750)
+++.+.|+.+++ .|++++++||+....++.+++.+|++. +++.- +|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence 788899999999 699999999999999999999999985 44432 222 3 99999999
Q ss_pred -HhhcCCeEEEEcCCccCHHHHH
Q 004479 654 -SRDMGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 654 -~~~~g~~VamvGDG~NDapAL~ 675 (750)
+.. ...+.++|||.||.|||+
T Consensus 171 ~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 EDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HTHT-CCEEEEEESSGGGHHHHH
T ss_pred cCCC-CCeEEEEECCHHHHHHhC
Confidence 233 688999999999999986
No 56
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.35 E-value=2.1e-06 Score=86.25 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=78.9
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec------------------CCHhhHHHHHHHH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS------------------LKPEDKLNHVKRT 653 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~------------------~~P~~K~~~V~~l 653 (750)
..+++|++.+.++.+++ .|++++++||-....+..+++.+|++++++. +.++.|.+.++++
T Consensus 85 ~~~~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~ 163 (202)
T TIGR01490 85 ESILYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAEL 163 (202)
T ss_pred HHhccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHH
Confidence 45789999999999999 5999999999999999999999999876643 2346788888887
Q ss_pred HhhcC---CeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 654 SRDMG---GGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 654 ~~~~g---~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
.++.+ ..+.++||+.||.|+++.|+.++++..
T Consensus 164 ~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 164 LAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 65423 268899999999999999999999874
No 57
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.35 E-value=4.6e-06 Score=87.88 Aligned_cols=53 Identities=23% Similarity=0.376 Sum_probs=47.4
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
..++++||+.||.+|++.|++|++||. +.+..++.||++..+++=.++.++++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vamgn-a~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAMGN-ADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEecC-chHHHHHhCCEEEecCCCCcHHHHHH
Confidence 359999999999999999999999996 67778999999998888888888775
No 58
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.33 E-value=2e-06 Score=87.45 Aligned_cols=90 Identities=14% Similarity=0.285 Sum_probs=75.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC-ceEEec-C----------CH------------hhHHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI-NEVYCS-L----------KP------------EDKLN 648 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI-~~v~a~-~----------~P------------~~K~~ 648 (750)
-+++|++.+.++.|++ .|+++.++||........+.+.++. ..+++. + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 5799999999999999 5999999999999999999988743 445441 1 13 35899
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEEeC
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIamg 684 (750)
+++.++.. ...+.|+|||.||.+|++.||+.++=+
T Consensus 148 ~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 99998876 678899999999999999999977754
No 59
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.31 E-value=1.5e-06 Score=85.08 Aligned_cols=83 Identities=28% Similarity=0.461 Sum_probs=70.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe-------------------cCCHhhHHHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC-------------------SLKPEDKLNHVKRTS 654 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a-------------------~~~P~~K~~~V~~l~ 654 (750)
+++|++.+.++.|++ .|++++++||.....++.+++.+|+..+++ ...+..|...++.++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 368999999999999 599999999999999999999999986554 134578999999877
Q ss_pred hhcC---CeEEEEcCCccCHHHHHhC
Q 004479 655 RDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 655 ~~~g---~~VamvGDG~NDapAL~~A 677 (750)
++.| ..+.|+|||.||.||++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6422 4689999999999999875
No 60
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.30 E-value=5.7e-06 Score=85.39 Aligned_cols=116 Identities=23% Similarity=0.377 Sum_probs=94.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------------------------------
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------ 636 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------ 636 (750)
..+.+++.+++++|++ .|+++++.||-....+..+.+++++..
T Consensus 14 ~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 14 GKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 4577999999999999 699999999999999999999999851
Q ss_pred --------------------------------------------------------------------------------
Q 004479 637 -------------------------------------------------------------------------------- 636 (750)
Q Consensus 637 -------------------------------------------------------------------------------- 636 (750)
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence
Q ss_pred ---EEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHH
Q 004479 637 ---VYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 637 ---v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~ 708 (750)
-+-+++| -.|..-++.+.+..| ..++++||+-||.+||+.++.|+||+. +++..++.||.+....+=.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~n-a~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGN-ATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETT-S-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcC-CCHHHHHhCCEEecCCCCChHH
Confidence 1223344 468888888876433 578999999999999999999999996 8899999999998765446665
Q ss_pred HH
Q 004479 709 FC 710 (750)
Q Consensus 709 ~~ 710 (750)
++
T Consensus 252 ~~ 253 (254)
T PF08282_consen 252 KA 253 (254)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 61
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.29 E-value=3.5e-06 Score=88.03 Aligned_cols=51 Identities=33% Similarity=0.485 Sum_probs=44.5
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
..++++||+.||.+|++.|+.|++|+. +.+..++.||++..+++=.++.++
T Consensus 205 ~~~~~~GD~~nD~~m~~~~~~~~a~~n-a~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 205 EDVIAFGDGMNDIEMLEAAGYGVAMGN-ADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred HHEEEeCCcHHhHHHHHhCCceeEecC-chHHHHHhCCEEecCCCCcchhhh
Confidence 469999999999999999999999985 788899999999987776666553
No 62
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.20 E-value=3.6e-06 Score=77.92 Aligned_cols=113 Identities=19% Similarity=0.305 Sum_probs=89.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC
Q 004479 601 DVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 601 ~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A 677 (750)
-.|+.|.+ +|+++-++||-+....+.=|+++||..+|-. -++|....+.|.++.+ .-|+++||-.||-|+|++.
T Consensus 42 ~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~v 118 (170)
T COG1778 42 HGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGIKHLYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKV 118 (170)
T ss_pred HHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCCceeeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHc
Confidence 35778888 7999999999999999999999999988876 4689999998887533 4699999999999999999
Q ss_pred CccEEeCCCCcHHHHhhcCEEEecCC----CCCHHHHHHHHHHH
Q 004479 678 TVGIVLAQRASATAIAVADVLLLRNN----ISGVPFCVAKSRQT 717 (750)
Q Consensus 678 dVGIamg~~~s~~A~~aADivL~~~~----l~~l~~~i~~~R~~ 717 (750)
..+++... +-.--++.||+|+-... +..+.++|..++..
T Consensus 119 Gls~a~~d-Ah~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~ 161 (170)
T COG1778 119 GLSVAVAD-AHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGK 161 (170)
T ss_pred CCcccccc-cCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCc
Confidence 99999976 66677788898875432 33344444444433
No 63
>PLN02887 hydrolase family protein
Probab=98.18 E-value=9.9e-06 Score=93.22 Aligned_cols=52 Identities=31% Similarity=0.501 Sum_probs=47.2
Q ss_pred eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 660 GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
.|+++|||.||.+||+.|+.|||||+ +.+..++.||+|..+++=.++.++++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgN-A~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSN-GAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCC-CCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 58999999999999999999999996 89999999999988888888887765
No 64
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.14 E-value=6.6e-06 Score=81.33 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=73.2
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec---------------------CCH--hh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS---------------------LKP--ED 645 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~---------------------~~P--~~ 645 (750)
-+++|++.+.++.|++ .|+++.++|+.+......+.+..|+.. +++. ..| ..
T Consensus 71 ~~l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 4789999999999998 599999999999999999999999864 4431 111 24
Q ss_pred HHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 646 KLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 646 K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
|.++++.++++....+.|+|||.||..|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999876424789999999999999999987554
No 65
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.13 E-value=1e-05 Score=82.71 Aligned_cols=118 Identities=22% Similarity=0.338 Sum_probs=86.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec---------CCHhh--HHHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS---------LKPED--KLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~---------~~P~~--K~~~V~~l~~~~g~~V 661 (750)
.++.|++.+.++.|++ .|+++.++||........+.+..|+.+.|.. ..|+. -...++.++.. ...+
T Consensus 92 ~~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~ 169 (226)
T PRK13222 92 SRLYPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-PEEM 169 (226)
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-hhhe
Confidence 5688999999999999 5999999999999999999999999653321 22321 13334444333 4679
Q ss_pred EEEcCCccCHHHHHhCCc-cEEeCC--C-CcHHHHhhcCEEEecCCCCCHHHHHHHH
Q 004479 662 IMVGEGINDAPALAAATV-GIVLAQ--R-ASATAIAVADVLLLRNNISGVPFCVAKS 714 (750)
Q Consensus 662 amvGDG~NDapAL~~AdV-GIamg~--~-~s~~A~~aADivL~~~~l~~l~~~i~~~ 714 (750)
.|+||+.||..+.+.|++ +|.+.. . ..+.....+|+++ +++..+...+..+
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 999999999999999988 555432 1 2344455788888 7888888776543
No 66
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.06 E-value=1.1e-05 Score=82.24 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=72.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--eEEec---C--------C--H----------hhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--EVYCS---L--------K--P----------EDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~v~a~---~--------~--P----------~~K~~ 648 (750)
+++|++.+.++.|++ .|+++.++||-....+..+.+.+ +. .+++. . . | ..|..
T Consensus 74 ~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 74 EIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 689999999999999 59999999999999999999988 64 36543 1 1 1 24888
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 649 HVKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 649 ~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
.++.++.. ...+.|+|||.||.+|.++||+.++
T Consensus 152 ~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 99888776 6789999999999999999999777
No 67
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.97 E-value=2.9e-05 Score=79.27 Aligned_cols=116 Identities=28% Similarity=0.369 Sum_probs=89.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----Ee-cCC------HhhHHHHHHHHHhhcCCe
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----YC-SLK------PEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~a-~~~------P~~K~~~V~~l~~~~g~~ 660 (750)
...+-|+++++++.|++ .|++..++|+++...+..+.+..|+... ++ +-. |+.....++.+... .+.
T Consensus 87 ~~~~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~~~ 164 (220)
T COG0546 87 ESRLFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-PEE 164 (220)
T ss_pred cCccCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-hhh
Confidence 45678999999999999 6999999999999999999999999753 33 323 33344444444333 346
Q ss_pred EEEEcCCccCHHHHHhCC---ccEEeCCC-CcHHHHhhcCEEEecCCCCCHHHHH
Q 004479 661 LIMVGEGINDAPALAAAT---VGIVLAQR-ASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 661 VamvGDG~NDapAL~~Ad---VGIamg~~-~s~~A~~aADivL~~~~l~~l~~~i 711 (750)
+.||||..||..|=++|+ ||+..|.. ........+|+++ +++..|...+
T Consensus 165 ~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 165 ALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred eEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 999999999999999998 77888753 4556677799999 6677766554
No 68
>PRK08238 hypothetical protein; Validated
Probab=97.88 E-value=9.6e-05 Score=83.62 Aligned_cols=89 Identities=26% Similarity=0.330 Sum_probs=75.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC-ceEEe-----cCCHhhHHHHHHHHHhhcCCeEEEEcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI-NEVYC-----SLKPEDKLNHVKRTSRDMGGGLIMVGEG 667 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI-~~v~a-----~~~P~~K~~~V~~l~~~~g~~VamvGDG 667 (750)
|++|++.+.++++|+ .|+++.++|+-++..++.+++.+|+ +.+.+ ++.|+.|.+.+++...+ +.+.|+||.
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~~~~kg~~K~~~l~~~l~~--~~~~yvGDS 148 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDGTTNLKGAAKAAALVEAFGE--RGFDYAGNS 148 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCccccCCchHHHHHHHHhCc--cCeeEecCC
Confidence 588999999999999 5999999999999999999999997 66664 35778887766643322 236889999
Q ss_pred ccCHHHHHhCCccEEeCC
Q 004479 668 INDAPALAAATVGIVLAQ 685 (750)
Q Consensus 668 ~NDapAL~~AdVGIamg~ 685 (750)
.||.|+++.|+-.++++.
T Consensus 149 ~~Dlp~~~~A~~av~Vn~ 166 (479)
T PRK08238 149 AADLPVWAAARRAIVVGA 166 (479)
T ss_pred HHHHHHHHhCCCeEEECC
Confidence 999999999999999986
No 69
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.85 E-value=6.7e-05 Score=69.15 Aligned_cols=91 Identities=23% Similarity=0.396 Sum_probs=68.3
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC----ceEEe-----------------------cCC
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI----NEVYC-----------------------SLK 642 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI----~~v~a-----------------------~~~ 642 (750)
....++++++.+.+++|++ .|++++++||.....+..+.+++|+ ..+++ +-.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 3456899999999999999 5999999999999999999999998 33443 223
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHh-CCccEE
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA-ATVGIV 682 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~-AdVGIa 682 (750)
|+.+..+.+.+... ...+.|+||+.||..+++. ..-+|+
T Consensus 99 ~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 99 PDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceee
Confidence 33333444443333 4679999999999999998 444443
No 70
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.77 E-value=0.00011 Score=74.05 Aligned_cols=114 Identities=24% Similarity=0.343 Sum_probs=80.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec--C-CHhhHHHHHHHHHhhc---CCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS--L-KPEDKLNHVKRTSRDM---GGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~--~-~P~~K~~~V~~l~~~~---g~~Vam 663 (750)
++.|++.+++++|++ .|+++.++|+.+...+..+-+..|+.+ +++. . .|.-|.+..+...++. ...+.|
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 678999999999999 599999999999999999999999954 3321 1 1122333333333221 356999
Q ss_pred EcCCccCHHHHHhCCccE---EeCC-CCcHHHHhhcCEEEecCCCCCHHHH
Q 004479 664 VGEGINDAPALAAATVGI---VLAQ-RASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGI---amg~-~~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
|||+.+|..+-+++++.. .-|. ...+...+.+|+++ +++..+..+
T Consensus 154 igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~ 202 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLAL 202 (205)
T ss_pred EcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHH
Confidence 999999999999998753 2332 12334566799987 555555443
No 71
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.72 E-value=0.00019 Score=74.99 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=42.2
Q ss_pred CeEEEEcCCccCHHHHHhCCccEEeCCCCc---HHHHhh--c-CEEEecCCCCCHHHHHH
Q 004479 659 GGLIMVGEGINDAPALAAATVGIVLAQRAS---ATAIAV--A-DVLLLRNNISGVPFCVA 712 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVGIamg~~~s---~~A~~a--A-DivL~~~~l~~l~~~i~ 712 (750)
..+.++||+.||.+||+.|+.|+||++ +. +..++. | ++|-.+++=.++.++++
T Consensus 195 ~~~~a~GD~~ND~~Ml~~ag~~vam~N-a~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 195 IKVVGLGDSPNDLPLLEVVDLAVVVPG-PNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred ceEEEEcCCHhhHHHHHHCCEEEEeCC-CCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 359999999999999999999999997 54 356665 4 47766777777777664
No 72
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.65 E-value=0.00018 Score=73.01 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=79.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE----e-cCCHhhH--HHHHHHHHhhc---CCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY----C-SLKPEDK--LNHVKRTSRDM---GGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~----a-~~~P~~K--~~~V~~l~~~~---g~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+.....+..+-+..|+.+.| + +..+..| .+.++.+.++. ...+.|
T Consensus 82 ~~~~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 160 (214)
T PRK13288 82 TEYETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM 160 (214)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence 477999999999999 59999999999999999999999997643 2 1111112 22333333221 356899
Q ss_pred EcCCccCHHHHHhCCc---cEEeCCCCc-HHHHhhcCEEEecCCCCCHHHHH
Q 004479 664 VGEGINDAPALAAATV---GIVLAQRAS-ATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 664 vGDG~NDapAL~~AdV---GIamg~~~s-~~A~~aADivL~~~~l~~l~~~i 711 (750)
|||..+|..|-++|++ |+.-|.... +.....+|+++ +++..+...+
T Consensus 161 iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 161 VGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 9999999999999987 344443222 23344688887 5666666544
No 73
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.62 E-value=0.00027 Score=74.54 Aligned_cols=40 Identities=10% Similarity=0.285 Sum_probs=36.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
+-+.++++|++|++ .|+++++.||-....+..+.+++|++
T Consensus 25 i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 45789999999999 59999999999999999999999884
No 74
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.61 E-value=0.0002 Score=75.53 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=83.2
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----E-ecCCHhhH--HHHHHHHHhhc---CCeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----Y-CSLKPEDK--LNHVKRTSRDM---GGGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~-a~~~P~~K--~~~V~~l~~~~---g~~Va 662 (750)
.++.|++.++++.|++ .|+++.++|+-+...+..+.++.|+... + ++..|..| .+.++.+.++. ...+.
T Consensus 100 ~~~~~g~~e~L~~Lk~-~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKK-QGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 4788999999999998 5999999999999999999999998653 2 22233333 23344433322 35699
Q ss_pred EEcCCccCHHHHHhCCcc-EEe--CCC-CcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 663 MVGEGINDAPALAAATVG-IVL--AQR-ASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG-Iam--g~~-~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
||||+.||..+.+.|++- +++ |.. ..+.....+|.++ +++..+..++.
T Consensus 179 ~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 999999999999999973 333 321 2233445799988 66777765543
No 75
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.48 E-value=0.00028 Score=74.47 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=69.2
Q ss_pred HHHHhcCCcEEEEe---cCCCHHHHHHHHHHcCCc----eEEecCCHh-hHHHHHHHHHhhc---C-CeEEEEcCCccCH
Q 004479 604 AELKDHARLRVMML---TGDHESSAQRVANAVGIN----EVYCSLKPE-DKLNHVKRTSRDM---G-GGLIMVGEGINDA 671 (750)
Q Consensus 604 ~~Lk~~agi~v~ml---TGD~~~tA~~iA~~~GI~----~v~a~~~P~-~K~~~V~~l~~~~---g-~~VamvGDG~NDa 671 (750)
+.+++ .++...++ +...........+..|+. ..+-+..|. .|..-++.+.+.. . ..|+++||+.||.
T Consensus 142 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi 220 (273)
T PRK00192 142 RLAKD-REFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDL 220 (273)
T ss_pred HHHHh-cccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhH
Confidence 34444 34544433 444444444545566764 223343333 7888888877542 3 7899999999999
Q ss_pred HHHHhCCccEEeCCCCcHHHH----hhc-CEEEe--cCCCCCHHHHHH
Q 004479 672 PALAAATVGIVLAQRASATAI----AVA-DVLLL--RNNISGVPFCVA 712 (750)
Q Consensus 672 pAL~~AdVGIamg~~~s~~A~----~aA-DivL~--~~~l~~l~~~i~ 712 (750)
+|++.|++|++|++ +.+..+ +.| +.+.. .++=.++.++++
T Consensus 221 ~m~~~ag~~vam~N-A~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 221 PMLEAADIAVVVPG-PDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred HHHHhCCeeEEeCC-CCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 99999999999996 777777 555 56663 444556666554
No 76
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.48 E-value=0.00029 Score=71.87 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=77.9
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC-------CHhhHHHHHHHHHhhcC---CeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL-------KPEDKLNHVKRTSRDMG---GGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~-------~P~~K~~~V~~l~~~~g---~~Va 662 (750)
-++.|++.++++.|++ .|+++.++|+........+.++.||...|... .+.-+.+..+.+.++.| ..+.
T Consensus 91 ~~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKA-QGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4678999999999999 59999999999999999999999997533221 11122234444443323 4689
Q ss_pred EEcCCccCHHHHHhCCccEEeCCCCc---HHHHhhcCEEEecCCCCCHH
Q 004479 663 MVGEGINDAPALAAATVGIVLAQRAS---ATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIamg~~~s---~~A~~aADivL~~~~l~~l~ 708 (750)
|+||..||..+-+.|++....-..+. +.-...+|+++ .++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 99999999999999997654322121 11123577776 4555443
No 77
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.37 E-value=0.00048 Score=69.57 Aligned_cols=112 Identities=22% Similarity=0.331 Sum_probs=77.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-CCHhhH--HHHHHHHHhhcC---CeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-LKPEDK--LNHVKRTSRDMG---GGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-~~P~~K--~~~V~~l~~~~g---~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+-+...+..+.+..|+.. +++. -.+..| .+.+..+.++.| ..+.|
T Consensus 85 ~~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 85 SVFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence 588999999999999 599999999999999999999999854 3332 111112 233333333222 56999
Q ss_pred EcCCccCHHHHHhCCccEE-e--CCCC-cHHHHhhcCEEEecCCCCCHH
Q 004479 664 VGEGINDAPALAAATVGIV-L--AQRA-SATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGIa-m--g~~~-s~~A~~aADivL~~~~l~~l~ 708 (750)
+||..||..+.++|++-.. + |... .......+|+++ +++..+.
T Consensus 164 igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 9999999999999997643 3 2211 123334688887 5555544
No 78
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.28 E-value=0.0011 Score=69.74 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=80.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------- 636 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------- 636 (750)
.+-+++.++|+.|++..|+.++++||-.......+.+.+++.-
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 4558899999999873489999999999999998887776420
Q ss_pred ------------------------------------------------EEecCCHh--hHHHHHHHHHhhcC---CeEEE
Q 004479 637 ------------------------------------------------VYCSLKPE--DKLNHVKRTSRDMG---GGLIM 663 (750)
Q Consensus 637 ------------------------------------------------v~a~~~P~--~K~~~V~~l~~~~g---~~Vam 663 (750)
.+-++.|. +|..-++.+.+..| ..+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 11223332 45555655554433 56899
Q ss_pred EcCCccCHHHHHhC----CccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 664 VGEGINDAPALAAA----TVGIVLAQRASATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 664 vGDG~NDapAL~~A----dVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+||+.||-+|++.+ +.||+||... ..|++.| ++...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeC--CCHHHHHHHHH
Confidence 99999999999999 9999999632 4478877 45666655543
No 79
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.18 E-value=0.002 Score=67.87 Aligned_cols=114 Identities=19% Similarity=0.277 Sum_probs=81.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC---CH-hhHHHHHHHHHhhc---CCeEEEEcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL---KP-EDKLNHVKRTSRDM---GGGLIMVGE 666 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~---~P-~~K~~~V~~l~~~~---g~~VamvGD 666 (750)
++.|++.+.++.|++ .|+++.++|+.+...+..+-+..|+.+.|..+ .| ..|.+..+.+.++. ...++||||
T Consensus 142 ~l~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECC
Confidence 578999999999999 59999999999999999999999997533211 11 12444444443321 346999999
Q ss_pred CccCHHHHHhCCccEE---eCCCCcH--HHHhhcCEEEecCCCCCHHHHH
Q 004479 667 GINDAPALAAATVGIV---LAQRASA--TAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 667 G~NDapAL~~AdVGIa---mg~~~s~--~A~~aADivL~~~~l~~l~~~i 711 (750)
..+|..|-++|.+-.. -|. .+. .....+|+++ +++..|+.++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~-~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGF-NDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCC-CCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 9999999999987532 332 222 2234589988 6777776654
No 80
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.18 E-value=0.0027 Score=64.24 Aligned_cols=91 Identities=12% Similarity=0.082 Sum_probs=72.0
Q ss_pred CCchhHHHHHH-HHHhcCCcEEEEecCCCHHHHHHHHHHc---CCceEEe--------------cCCHhhHHHHHHHHHh
Q 004479 594 RPRPGVSDVIA-ELKDHARLRVMMLTGDHESSAQRVANAV---GINEVYC--------------SLKPEDKLNHVKRTSR 655 (750)
Q Consensus 594 ~lr~~a~~~I~-~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI~~v~a--------------~~~P~~K~~~V~~l~~ 655 (750)
.++|++.+.|+ .+++ .|.+++++|+=....++.+|+.. |++++.| .+.-++|+..+++.-.
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 47899999996 7887 59999999999999999999884 4344322 2555889988876542
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
......-+-||..||.|+|+.||-.++++.
T Consensus 173 ~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 173 SPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 212445578999999999999999999974
No 81
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.16 E-value=0.0047 Score=64.49 Aligned_cols=119 Identities=13% Similarity=0.220 Sum_probs=83.1
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc----eEEecC-----------C--H----hhHHHHHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----EVYCSL-----------K--P----EDKLNHVK 651 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----~v~a~~-----------~--P----~~K~~~V~ 651 (750)
-++||++.+.++.|++ .|+++.++||=....+..+.+++|+. .++|+. . | ..|.+.+.
T Consensus 120 l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4689999999999999 69999999999999999999999994 342211 1 2 34665544
Q ss_pred H-HHhhc-----CCeEEEEcCCccCHHHHHhC---CccEEeC--CCCcH----HHHhhcCEEEecCCCCCHHHHHH
Q 004479 652 R-TSRDM-----GGGLIMVGEGINDAPALAAA---TVGIVLA--QRASA----TAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 652 ~-l~~~~-----g~~VamvGDG~NDapAL~~A---dVGIamg--~~~s~----~A~~aADivL~~~~l~~l~~~i~ 712 (750)
. ..+.. ...|.|+|||.||.+|-.-. .-=|.+| ..--+ .=.++=||||.+|.=-.++..+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~il 274 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSIL 274 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHHH
Confidence 2 22211 35799999999999996433 1123333 21112 23467899999998877777653
No 82
>PRK11590 hypothetical protein; Provisional
Probab=97.14 E-value=0.0034 Score=63.53 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=73.0
Q ss_pred CCchhHHHHH-HHHHhcCCcEEEEecCCCHHHHHHHHHHcCC---ceEEe--------------cCCHhhHHHHHHHHHh
Q 004479 594 RPRPGVSDVI-AELKDHARLRVMMLTGDHESSAQRVANAVGI---NEVYC--------------SLKPEDKLNHVKRTSR 655 (750)
Q Consensus 594 ~lr~~a~~~I-~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI---~~v~a--------------~~~P~~K~~~V~~l~~ 655 (750)
.++|++.+.| +.|++ .|.+++++|+-....+..+++.+|+ +++.| .+.-++|+..+++.-.
T Consensus 95 ~~~pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 4589999999 56887 6999999999999999999999994 54322 2566899988876532
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccEEeCC
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGIVLAQ 685 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGIamg~ 685 (750)
......-+-||..||.|+|+.|+-.++++.
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 213445578999999999999999999975
No 83
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.98 E-value=0.0014 Score=67.56 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhhcCC---eEEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcC----EEEecCCCCCHHHHHH
Q 004479 645 DKLNHVKRTSRDMGG---GLIMVGEGINDAPALAAATVGIVLAQRASATAIAVAD----VLLLRNNISGVPFCVA 712 (750)
Q Consensus 645 ~K~~~V~~l~~~~g~---~VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aAD----ivL~~~~l~~l~~~i~ 712 (750)
.|...++.+.++.|. .++++||+.||.+|++.++.||+|++ +.+..++.|| ++.-.++=.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n-a~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN-HDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC-CcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 788888888776442 58999999999999999999999996 7788889999 6654455556666654
No 84
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.98 E-value=0.0029 Score=64.96 Aligned_cols=113 Identities=20% Similarity=0.125 Sum_probs=77.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----Ee-cC----CHhh--HHHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----YC-SL----KPED--KLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----~a-~~----~P~~--K~~~V~~l~~~~g~~Va 662 (750)
++.|++.+.++.|++ .|+++.++|+.+...+..+-+..|+.+. ++ .. .|.- =...++.+.-. ...+.
T Consensus 95 ~~~pg~~~~L~~L~~-~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p~~~l 172 (229)
T PRK13226 95 QLFDGVEGMLQRLEC-AGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-PTDCV 172 (229)
T ss_pred eeCCCHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-hhhEE
Confidence 578999999999999 5999999999999999988899998642 22 21 2221 12333333322 35699
Q ss_pred EEcCCccCHHHHHhCCccE---EeCCC--CcHHHHhhcCEEEecCCCCCHHHH
Q 004479 663 MVGEGINDAPALAAATVGI---VLAQR--ASATAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGI---amg~~--~s~~A~~aADivL~~~~l~~l~~~ 710 (750)
||||..||..+-++|.+-. .-|.. ........+|+++ +++..|...
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 9999999999999998763 23321 1112234689988 555555443
No 85
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.94 E-value=0.0042 Score=69.68 Aligned_cols=161 Identities=19% Similarity=0.274 Sum_probs=122.0
Q ss_pred EEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----------------------------
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----------------------------- 636 (750)
Q Consensus 586 lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----------------------------- 636 (750)
.|++...-+.|++....|+.|-+ +-+|.+-.+-.++...+-.|+++||..
T Consensus 818 ~GlVs~~Yea~ldiVriIdgL~n-aCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~q 896 (1354)
T KOG4383|consen 818 CGLVSLHYEAILDIVRIIDGLDN-ACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQ 896 (1354)
T ss_pred hhhhhhhccchhhHHHHHHHhhh-hheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhcc
Confidence 79999999999999999999998 899999999999999999999999951
Q ss_pred --------------------------------------------------------------------------EEecCC
Q 004479 637 --------------------------------------------------------------------------VYCSLK 642 (750)
Q Consensus 637 --------------------------------------------------------------------------v~a~~~ 642 (750)
.|..++
T Consensus 897 kpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcn 976 (1354)
T KOG4383|consen 897 KPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCN 976 (1354)
T ss_pred CcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCC
Confidence 799999
Q ss_pred HhhHHHHHHHHHhhcCCeEEEEcCCccCHHH--HHhCCccEEeCCC------------CcHHH-Hhhc------------
Q 004479 643 PEDKLNHVKRTSRDMGGGLIMVGEGINDAPA--LAAATVGIVLAQR------------ASATA-IAVA------------ 695 (750)
Q Consensus 643 P~~K~~~V~~l~~~~g~~VamvGDG~NDapA--L~~AdVGIamg~~------------~s~~A-~~aA------------ 695 (750)
|+.--++|+-+|+. |++++.+|.-.|-... .-+||++|++-.- ++.+. .++.
T Consensus 977 peamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqL 1055 (1354)
T KOG4383|consen 977 PEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQL 1055 (1354)
T ss_pred HHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccc
Confidence 99999999999988 9999999998886553 3688999887421 11111 1122
Q ss_pred -----CEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhcccccc
Q 004479 696 -----DVLLLRNNISGVPFCVAKSRQTTSLVKQNVALALSCIILASL---PSVLGFLPLWL 748 (750)
Q Consensus 696 -----DivL~~~~l~~l~~~i~~~R~~~~~i~~ni~~al~~~~~~~i---~~~~G~l~~~~ 748 (750)
|+-+-...+-++.++|.-+|..+..+|..+.|.+...+...+ +.-+-++|+.+
T Consensus 1056 naL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~ 1116 (1354)
T KOG4383|consen 1056 NALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIF 1116 (1354)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 333333334456688888999999999999888754333322 23334566543
No 86
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.93 E-value=0.004 Score=64.73 Aligned_cols=101 Identities=11% Similarity=0.219 Sum_probs=75.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce------------------------------------
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE------------------------------------ 636 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~------------------------------------ 636 (750)
.+..|...++++++++ .|+.++..||-.....+.+.+++++..
T Consensus 20 ~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 20 NQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred hHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567888999999998 488999999999999999988888631
Q ss_pred -----------------------------------------------------EEe-----cCCH--hhHHHHHHHHHhh
Q 004479 637 -----------------------------------------------------VYC-----SLKP--EDKLNHVKRTSRD 656 (750)
Q Consensus 637 -----------------------------------------------------v~a-----~~~P--~~K~~~V~~l~~~ 656 (750)
+++ +..| -.|..-++.++++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 111 2233 2466666666654
Q ss_pred cC---CeEEEEcCCccCHHHHHh-CCccEEeCCCCcHHHHhhc
Q 004479 657 MG---GGLIMVGEGINDAPALAA-ATVGIVLAQRASATAIAVA 695 (750)
Q Consensus 657 ~g---~~VamvGDG~NDapAL~~-AdVGIamg~~~s~~A~~aA 695 (750)
.| ..|+++||+.||.+|++. ++.|++|++ +.+..++.+
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n-a~~~~k~~~ 220 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN-AQEELLQWY 220 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECC-CHHHHHHHH
Confidence 33 569999999999999998 789999996 666556543
No 87
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.85 E-value=0.0046 Score=65.04 Aligned_cols=115 Identities=21% Similarity=0.295 Sum_probs=78.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----EEec-CCHhhH---HHHHHHHHhhcC----Ce
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-----VYCS-LKPEDK---LNHVKRTSRDMG----GG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-----v~a~-~~P~~K---~~~V~~l~~~~g----~~ 660 (750)
++-|++.++++.|++ .|+++.++||.....+..+-+..|+.. +++. -.+..| .-+.+.+++. | ..
T Consensus 101 ~~~pg~~elL~~L~~-~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l-~~~~~~e 178 (267)
T PRK13478 101 TPIPGVLEVIAALRA-RGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIEL-GVYDVAA 178 (267)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHc-CCCCCcc
Confidence 567999999999999 599999999999998888777766532 3322 111112 2233333332 3 45
Q ss_pred EEEEcCCccCHHHHHhCCc---cEEeCCCC------------------------cHHHHhhcCEEEecCCCCCHHHHHH
Q 004479 661 LIMVGEGINDAPALAAATV---GIVLAQRA------------------------SATAIAVADVLLLRNNISGVPFCVA 712 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdV---GIamg~~~------------------------s~~A~~aADivL~~~~l~~l~~~i~ 712 (750)
+.||||..+|..|-+.|.+ |+.-|... .......+|+++ +++..+...+.
T Consensus 179 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 179 CVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred eEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 8999999999999999986 55544321 122334588888 77777776653
No 88
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.83 E-value=0.0033 Score=62.82 Aligned_cols=84 Identities=20% Similarity=0.251 Sum_probs=63.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe----------cCCHhhHHHHHHHHHhhcCCeE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC----------SLKPEDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a----------~~~P~~K~~~V~~l~~~~g~~V 661 (750)
.+++.+++.++++.|++ .|+++.++||-....+..+-+.+|+...|. .-.|+--...++.+.-. ...+
T Consensus 104 ~~~~~~~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~-~~~~ 181 (197)
T TIGR01548 104 EDETLLTPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVE-ACHA 181 (197)
T ss_pred ccccccCHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcC-cccE
Confidence 45577788999999998 599999999999999999999999975331 11233334444444433 4579
Q ss_pred EEEcCCccCHHHHHhC
Q 004479 662 IMVGEGINDAPALAAA 677 (750)
Q Consensus 662 amvGDG~NDapAL~~A 677 (750)
.||||+.+|..|-++|
T Consensus 182 i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 182 AMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEeCCHHHHHHHHhC
Confidence 9999999999887664
No 89
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.78 E-value=0.0069 Score=61.97 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=37.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.+..-+++.++|++|++ .|+++++.||-....+..+.+++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 45566789999999999 5999999999999999999999997
No 90
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.71 E-value=0.0067 Score=63.18 Aligned_cols=84 Identities=23% Similarity=0.272 Sum_probs=63.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ec-----CCHhhHHHHHHHHHhhcC----C
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CS-----LKPEDKLNHVKRTSRDMG----G 659 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~-----~~P~~K~~~V~~l~~~~g----~ 659 (750)
++.|++.+.++.|++ .|+++.++|+.....+..+-++.|+...| +. ..|. ..-+.+.+++. | .
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l-~~~~~~ 175 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIEL-GVYDVA 175 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHc-CCCCch
Confidence 567999999999999 59999999999999999998888875532 21 1232 22333444433 3 3
Q ss_pred eEEEEcCCccCHHHHHhCCcc
Q 004479 660 GLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVG 680 (750)
.+.||||..+|..|-+.|.+-
T Consensus 176 ~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 176 ACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred heEEECCcHHHHHHHHHCCCe
Confidence 489999999999999999854
No 91
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.71 E-value=0.0084 Score=55.64 Aligned_cols=86 Identities=21% Similarity=0.257 Sum_probs=63.1
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCC--------HHHHHHHHHHcCCceEEe---cCCHhhHHHHHHHHHhhc----
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDH--------ESSAQRVANAVGINEVYC---SLKPEDKLNHVKRTSRDM---- 657 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~--------~~tA~~iA~~~GI~~v~a---~~~P~~K~~~V~~l~~~~---- 657 (750)
-++.|++.++++.|++ .|+++.++|+.. ......+.+++|+...+. .-.+.-|.+..+.+.++.
T Consensus 24 ~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 3678999999999999 699999999998 788889999999863222 111122334444443332
Q ss_pred CCeEEEEcC-CccCHHHHHhCCc
Q 004479 658 GGGLIMVGE-GINDAPALAAATV 679 (750)
Q Consensus 658 g~~VamvGD-G~NDapAL~~AdV 679 (750)
...+.|||| -.+|..+-+.+.+
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred hhheEEEcCCCcccHHHHHHCCC
Confidence 367999999 5999999988875
No 92
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.67 E-value=0.011 Score=61.80 Aligned_cols=42 Identities=5% Similarity=0.143 Sum_probs=37.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
+..-+.+.++|++|++ .|+.+++.||-.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4466789999999999 59999999999999999999999984
No 93
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.65 E-value=0.0084 Score=62.73 Aligned_cols=110 Identities=16% Similarity=0.303 Sum_probs=75.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-----CCHhhHHHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPEDKLNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~P~~K~~~V~~l~~~~---g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-....+..+-+.+|+.. +++. -.|. .++.....++. ...+
T Consensus 109 ~l~pg~~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~--Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 109 RLRPGSREFVQALKK-HEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPD--PEMFMYAAERLGFIPERC 185 (260)
T ss_pred ccCCCHHHHHHHHHH-CCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCC--HHHHHHHHHHhCCChHHe
Confidence 578999999999999 599999999999999999999999964 3221 1232 22333222221 3569
Q ss_pred EEEcCCccCHHHHHhCCccE-EeCCCCcHHHHhhcCEEEecCCCCCHH
Q 004479 662 IMVGEGINDAPALAAATVGI-VLAQRASATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGI-amg~~~s~~A~~aADivL~~~~l~~l~ 708 (750)
.||||..+|..|-++|.+-. ++.+..+......+|.++ ++++.+.
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 99999999999999999743 333222232334578876 4555443
No 94
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.62 E-value=0.0093 Score=62.00 Aligned_cols=109 Identities=16% Similarity=0.210 Sum_probs=75.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ecC----CHhh--HHHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CSL----KPED--KLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~~----~P~~--K~~~V~~l~~~~g~~Va 662 (750)
++.|++.++++.|++ .|+++.++|+-....+..+-+.+|+.+.| ++- .|.- =....+.+.-. ...+.
T Consensus 108 ~l~pgv~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~l 185 (248)
T PLN02770 108 KPLNGLYKLKKWIED-RGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS-KDHTF 185 (248)
T ss_pred CcCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCC-hhHEE
Confidence 578999999999999 59999999999999999999999986422 222 2222 12223333222 35699
Q ss_pred EEcCCccCHHHHHhCCcc---EEeCCCCcHHHHhhcCEEEecCCCCC
Q 004479 663 MVGEGINDAPALAAATVG---IVLAQRASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG---Iamg~~~s~~A~~aADivL~~~~l~~ 706 (750)
||||..+|..|-++|.+- +.-|....+.....+|.++ +++..
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 999999999999999864 3223211222234688887 56665
No 95
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.61 E-value=0.0071 Score=61.44 Aligned_cols=113 Identities=20% Similarity=0.328 Sum_probs=78.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--e----EEec-----CCHhhHHHHHHHHHhhcC---
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN--E----VYCS-----LKPEDKLNHVKRTSRDMG--- 658 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~--~----v~a~-----~~P~~K~~~V~~l~~~~g--- 658 (750)
.++.||+.+.++.|++ .|+++.++|+-.......+-+..|+. + +++. -.|. .++.....++.|
T Consensus 86 ~~l~~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~--p~~~~~a~~~~~~~~ 162 (220)
T TIGR03351 86 PVALPGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPA--PDLILRAMELTGVQD 162 (220)
T ss_pred CccCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCC--HHHHHHHHHHcCCCC
Confidence 4799999999999999 59999999999999999999999986 4 3332 2232 233333222213
Q ss_pred -CeEEEEcCCccCHHHHHhCCccE--EeCCC-CcH--HHHhhcCEEEecCCCCCHHHH
Q 004479 659 -GGLIMVGEGINDAPALAAATVGI--VLAQR-ASA--TAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 659 -~~VamvGDG~NDapAL~~AdVGI--amg~~-~s~--~A~~aADivL~~~~l~~l~~~ 710 (750)
..+.||||+.+|..|-++|++.. ++..+ .+. .....+|.++ ++++.+..+
T Consensus 163 ~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 163 VQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred hhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 46999999999999999999986 23221 121 1223577777 556555443
No 96
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.55 E-value=0.0071 Score=68.84 Aligned_cols=117 Identities=13% Similarity=0.167 Sum_probs=81.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec------CCHhhHHHHHHHHHhh-cCCeEEEEcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS------LKPEDKLNHVKRTSRD-MGGGLIMVGE 666 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~------~~P~~K~~~V~~l~~~-~g~~VamvGD 666 (750)
++.|++.+.++.||+ .|+++.++|+-....+..+-+.+|+...|.. ..+..|-+.+....++ .-..+.||||
T Consensus 330 ~l~pG~~e~L~~Lk~-~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGD 408 (459)
T PRK06698 330 ALYPNVKEIFTYIKE-NNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGD 408 (459)
T ss_pred CcCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeC
Confidence 688999999999999 5999999999999999999999999643221 1111232333333322 1356999999
Q ss_pred CccCHHHHHhCCcc-EEeCCC-CcHHHHhhcCEEEecCCCCCHHHHHHH
Q 004479 667 GINDAPALAAATVG-IVLAQR-ASATAIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 667 G~NDapAL~~AdVG-Iamg~~-~s~~A~~aADivL~~~~l~~l~~~i~~ 713 (750)
..+|..|-+.|.+- |++... ..+.....+|+++ ++++.+..++..
T Consensus 409 s~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 409 RLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred CHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 99999999999973 344221 1222234588887 667766665543
No 97
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.55 E-value=0.0068 Score=62.22 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=63.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecC----CCHHHHHHHHHHcCC--c----eEEecCCH--hhHHHHHHHHHhhcCCe
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTG----DHESSAQRVANAVGI--N----EVYCSLKP--EDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTG----D~~~tA~~iA~~~GI--~----~v~a~~~P--~~K~~~V~~l~~~~g~~ 660 (750)
-.+.|++++.++.|++ .|+++.++|| -...|+..+.+..|+ . .+++.-++ .+|... +++. +.
T Consensus 113 a~p~~Ga~elL~~L~~-~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~---l~~~--~i 186 (237)
T PRK11009 113 SIPKEVARQLIDMHVK-RGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQW---LKKK--NI 186 (237)
T ss_pred CcchHHHHHHHHHHHH-CCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHH---HHhc--CC
Confidence 3477889999999998 5999999999 457799999999999 4 34444333 445553 3433 35
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.|+||..+|..+-+.|++-
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCc
Confidence 89999999999999998864
No 98
>PLN02382 probable sucrose-phosphatase
Probab=96.50 E-value=0.016 Score=64.67 Aligned_cols=72 Identities=14% Similarity=0.284 Sum_probs=49.1
Q ss_pred cCCHh--hHHHHHHHHHhhc---C---CeEEEEcCCccCHHHHHhCC-ccEEeCCCCcHHHHhh--------cCEEEec-
Q 004479 640 SLKPE--DKLNHVKRTSRDM---G---GGLIMVGEGINDAPALAAAT-VGIVLAQRASATAIAV--------ADVLLLR- 701 (750)
Q Consensus 640 ~~~P~--~K~~~V~~l~~~~---g---~~VamvGDG~NDapAL~~Ad-VGIamg~~~s~~A~~a--------ADivL~~- 701 (750)
++.|. .|..-++.|+++. | ..+..+||+.||.+||+.++ .||+|++ +.+..++. ++++..+
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N-A~~elk~~a~~~~~~~~~~~~a~~ 246 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN-AQEELLQWYAENAKDNPKIIHATE 246 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC-CcHHHHHHHHhhccCCCcEEEcCC
Confidence 34444 3777777776653 2 36899999999999999999 6999997 66666653 2555442
Q ss_pred CCCCCHHHHHH
Q 004479 702 NNISGVPFCVA 712 (750)
Q Consensus 702 ~~l~~l~~~i~ 712 (750)
.+-.++.++++
T Consensus 247 ~~~~GI~~al~ 257 (413)
T PLN02382 247 RCAAGIIQAIG 257 (413)
T ss_pred CCccHHHHHHH
Confidence 34455555553
No 99
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.43 E-value=0.0069 Score=62.18 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC----CHHHHHHHHHHcCCceE----EecCC-H---hhHHHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD----HESSAQRVANAVGINEV----YCSLK-P---EDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD----~~~tA~~iA~~~GI~~v----~a~~~-P---~~K~~~V~~l~~~~g~~V 661 (750)
.+.+++++.++.|++ .|+++.++|+- ...++..+.+.+|+.+. ++.-. + .+|. ..+++. | .+
T Consensus 114 ~p~~~a~elL~~l~~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~-~-i~ 187 (237)
T TIGR01672 114 IPKEVARQLIDMHQR-RGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDK-N-IR 187 (237)
T ss_pred cchhHHHHHHHHHHH-CCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhC-C-Ce
Confidence 455569999999999 59999999996 77899999999999753 33211 0 1243 344443 4 57
Q ss_pred EEEcCCccCHHHHHhCCcc
Q 004479 662 IMVGEGINDAPALAAATVG 680 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVG 680 (750)
.|+||..||..+-+.|.+-
T Consensus 188 i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 188 IHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred EEEeCCHHHHHHHHHCCCC
Confidence 9999999999999888753
No 100
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=96.42 E-value=0.0044 Score=53.68 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=45.3
Q ss_pred CCCCchHHHHHhhhcCCCC---------CCccccceeeecCCeEEEEEeCeeeccCCCceeeeccCchHHHhhhccC
Q 004479 488 GTTHPIGRAVVDHSIGKDL---------PSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKS 555 (750)
Q Consensus 488 ~s~hP~~~Ai~~~~~~~~~---------~~~~~~~~~~~~g~g~~~~v~~~~~~~~~~~~~~~~kGs~~~i~~~~~~ 555 (750)
....|.+.||+.++...+. ....+..++|.+.+++|+++.. +++.++.++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-----~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-----NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-----CCCEEEEEcCCChHHHHHhcCC
Confidence 3566888888887755422 2234556777888888888874 2345777999999999999974
No 101
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.36 E-value=0.014 Score=58.43 Aligned_cols=40 Identities=13% Similarity=0.360 Sum_probs=35.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
++.+++.+++++|+++ |++++++||-.......+.++++.
T Consensus 17 ~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~ 56 (204)
T TIGR01484 17 ELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPL 56 (204)
T ss_pred cCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCC
Confidence 4778999999999994 899999999999999999887553
No 102
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.36 E-value=0.022 Score=56.26 Aligned_cols=118 Identities=20% Similarity=0.314 Sum_probs=91.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc--------------------------------------
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-------------------------------------- 635 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-------------------------------------- 635 (750)
++-|++.++.+.|++. ...+++|---.+-++++|..+|+.
T Consensus 83 ~lvPgA~etm~~l~~~--~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER--WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc--CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4669999999999863 678888888999999999999994
Q ss_pred ------eEEecCCHhhHHHHHHHHH---------------hhc--CCeEEEEcCCccCHHHHHhCC-cc-EEeCCCCcHH
Q 004479 636 ------EVYCSLKPEDKLNHVKRTS---------------RDM--GGGLIMVGEGINDAPALAAAT-VG-IVLAQRASAT 690 (750)
Q Consensus 636 ------~v~a~~~P~~K~~~V~~l~---------------~~~--g~~VamvGDG~NDapAL~~Ad-VG-Iamg~~~s~~ 690 (750)
++|.|+.|.+-.+++...+ ... ....+.|||.+.|..+|+.+. -| +|+.-+|..-
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1788888876555555443 211 234688999999999999874 22 4444456788
Q ss_pred HHhhcCEEEecCCCCCHHHHHHH
Q 004479 691 AIAVADVLLLRNNISGVPFCVAK 713 (750)
Q Consensus 691 A~~aADivL~~~~l~~l~~~i~~ 713 (750)
|..-||+.+..++.+++..+|.+
T Consensus 241 al~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccccceEEeccchhhhhHHHHH
Confidence 89999999999999998888875
No 103
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.35 E-value=0.016 Score=67.15 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=35.2
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.-+.+.++|++|++ .|+.+++.||-.......+++++|+
T Consensus 434 i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 44678999999999 6999999999999999999999986
No 104
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.33 E-value=0.02 Score=56.31 Aligned_cols=114 Identities=28% Similarity=0.350 Sum_probs=67.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCC--ceEEec----------CCH--h
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGI--NEVYCS----------LKP--E 644 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI--~~v~a~----------~~P--~ 644 (750)
.+.|++.+++++|++ .|+++.++|..+. .....+-+..|+ +.++.. ..| +
T Consensus 29 ~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~ 107 (181)
T PRK08942 29 IPIPGSIEAIARLKQ-AGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPG 107 (181)
T ss_pred EECCCHHHHHHHHHH-CCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHH
Confidence 357999999999999 5999999998763 112233345665 444421 122 2
Q ss_pred hHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCccE-EeCCCCcH--HHHhhc--CEEEecCCCCCHHHHH
Q 004479 645 DKLNHVKRTSRDMGGGLIMVGEGINDAPALAAATVGI-VLAQRASA--TAIAVA--DVLLLRNNISGVPFCV 711 (750)
Q Consensus 645 ~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~AdVGI-amg~~~s~--~A~~aA--DivL~~~~l~~l~~~i 711 (750)
-=...++.+.-. ...+.||||..+|..+-++|++-. .+..+... .....+ |+++ +++..+..++
T Consensus 108 ~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l 176 (181)
T PRK08942 108 MLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQAL 176 (181)
T ss_pred HHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHH
Confidence 223333333322 367999999999999999998642 22211111 112235 7776 5565555543
No 105
>PRK11587 putative phosphatase; Provisional
Probab=96.32 E-value=0.019 Score=58.41 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=73.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc---eEEec-----CCHhhHHHHHHHHHhh--cCCeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN---EVYCS-----LKPEDKLNHVKRTSRD--MGGGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~---~v~a~-----~~P~~K~~~V~~l~~~--~g~~Vam 663 (750)
++.|++.+.++.|++ .|+++.++|+.+...+...-+..|+. .+.+. ..|+- .-+...+++. ....+.|
T Consensus 83 ~~~pg~~e~L~~L~~-~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p-~~~~~~~~~~g~~p~~~l~ 160 (218)
T PRK11587 83 TALPGAIALLNHLNK-LGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEP-DAYLLGAQLLGLAPQECVV 160 (218)
T ss_pred eeCcCHHHHHHHHHH-cCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCc-HHHHHHHHHcCCCcccEEE
Confidence 578999999999999 59999999998877777776777874 22221 12321 1122222222 1367999
Q ss_pred EcCCccCHHHHHhCCcc-EEeCCCCcHHHHhhcCEEEecCCCCCH
Q 004479 664 VGEGINDAPALAAATVG-IVLAQRASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 664 vGDG~NDapAL~~AdVG-Iamg~~~s~~A~~aADivL~~~~l~~l 707 (750)
|||..+|..|-+.|.+- |++...........+|+++ ++++.+
T Consensus 161 igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 161 VEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred EecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe--cchhhe
Confidence 99999999999999974 5554322223344678877 445543
No 106
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.27 E-value=0.012 Score=58.66 Aligned_cols=85 Identities=15% Similarity=0.250 Sum_probs=63.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhH--HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDK--LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K--~~~V~~l~~~~g~~Va 662 (750)
++.|++.+++++|++ .|+++.++|+-+......+.+.+|+.+ +++ ...|.-. ....+.+.-. -..+.
T Consensus 92 ~~~~~~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p~~~~ 169 (198)
T TIGR01428 92 PPHPDVPAGLRALKE-RGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-PDEVL 169 (198)
T ss_pred CCCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-hhhEE
Confidence 578999999999999 599999999999999999999999853 332 2234322 2222222222 35689
Q ss_pred EEcCCccCHHHHHhCCcc
Q 004479 663 MVGEGINDAPALAAATVG 680 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG 680 (750)
||||+.+|..+-++|.+-
T Consensus 170 ~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFK 187 (198)
T ss_pred EEeCCHHHHHHHHHCCCc
Confidence 999999999998888765
No 107
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.15 E-value=0.019 Score=58.28 Aligned_cols=90 Identities=22% Similarity=0.316 Sum_probs=65.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhh--cCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRD--MGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~--~g~~Va 662 (750)
++.|++.++++.|++ .|+++.++|+=+.......-+.+|+.. +++ +..|... -+.+.+++. ....+.
T Consensus 94 ~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 94 RVYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPK-IFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHH-HHHHHHHHcCCChhhEE
Confidence 578999999999999 599999999988888888889999964 222 2234322 122223322 135699
Q ss_pred EEcCCc-cCHHHHHhCCcc-EEeCC
Q 004479 663 MVGEGI-NDAPALAAATVG-IVLAQ 685 (750)
Q Consensus 663 mvGDG~-NDapAL~~AdVG-Iamg~ 685 (750)
||||.. +|..+-++|++- |.+..
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECC
Confidence 999998 999999999863 44443
No 108
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.03 E-value=0.018 Score=61.56 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=70.2
Q ss_pred ecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-EE----e--------------cCCHhhHHHHHH
Q 004479 591 LEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-VY----C--------------SLKPEDKLNHVK 651 (750)
Q Consensus 591 ~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-v~----a--------------~~~P~~K~~~V~ 651 (750)
..+++.|++.++++.|++ .|+++.++||-...++..+.+.+|+.. .| + +-.|+-|...++
T Consensus 184 ~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~ 262 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFW 262 (300)
T ss_pred ccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHH
Confidence 468899999999999999 599999999999999999999998875 11 1 223445555555
Q ss_pred HHHhhcCCeEEEEcCCccCHHHHHhCCccE
Q 004479 652 RTSRDMGGGLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 652 ~l~~~~g~~VamvGDG~NDapAL~~AdVGI 681 (750)
++....-..+.||||..+|+-+-+.|.+-.
T Consensus 263 ~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 263 EKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 543211267999999999999999998763
No 109
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.98 E-value=0.033 Score=61.06 Aligned_cols=109 Identities=15% Similarity=0.260 Sum_probs=76.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-----CCHhhH--HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-----LKPEDK--LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-----~~P~~K--~~~V~~l~~~~g~~Va 662 (750)
++.||+.+.++.|++ .|+++.++|+-....+..+-+..||.+ +++. -.|+.. ...++.+.-. ...+.
T Consensus 216 ~l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~-Peecl 293 (381)
T PLN02575 216 RLRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI-PERCI 293 (381)
T ss_pred CcCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC-cccEE
Confidence 477999999999999 599999999999999999999999964 3222 133322 2233333322 46799
Q ss_pred EEcCCccCHHHHHhCCccEE-eCCCCcHHH-HhhcCEEEecCCCCCH
Q 004479 663 MVGEGINDAPALAAATVGIV-LAQRASATA-IAVADVLLLRNNISGV 707 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVGIa-mg~~~s~~A-~~aADivL~~~~l~~l 707 (750)
||||..+|..|-+.|.+-.. +.. +.+.. ...+|+++ +++..+
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECC-CCChhHhcCCCEEE--CCHHHH
Confidence 99999999999999987533 332 22222 23588887 566655
No 110
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.96 E-value=0.024 Score=55.28 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=64.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCC-HHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhc---CCeEEEEcCCc
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDH-ESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDM---GGGLIMVGEGI 668 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~-~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~---g~~VamvGDG~ 668 (750)
..+-|++.++++.|++ .|+++.++|+-+ ...+..+.+.+|+...+....|... ..+...++. ...+.||||..
T Consensus 42 ~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~~~~KP~p~--~~~~~l~~~~~~~~~~l~IGDs~ 118 (170)
T TIGR01668 42 NEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGIPVLPHAVKPPGC--AFRRAHPEMGLTSEQVAVVGDRL 118 (170)
T ss_pred CCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCCEEEcCCCCCChH--HHHHHHHHcCCCHHHEEEECCcc
Confidence 3578999999999999 599999999988 6788889999998765444455433 333332221 35699999998
Q ss_pred -cCHHHHHhCCcc
Q 004479 669 -NDAPALAAATVG 680 (750)
Q Consensus 669 -NDapAL~~AdVG 680 (750)
.|..+-+.|++-
T Consensus 119 ~~Di~aA~~aGi~ 131 (170)
T TIGR01668 119 FTDVMGGNRNGSY 131 (170)
T ss_pred hHHHHHHHHcCCe
Confidence 799999998873
No 111
>PRK06769 hypothetical protein; Validated
Probab=95.85 E-value=0.023 Score=55.63 Aligned_cols=86 Identities=16% Similarity=0.252 Sum_probs=59.5
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHH--------HHHHHHHHcCCceEEec----------CCHhhH--HHHHHHHH
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHES--------SAQRVANAVGINEVYCS----------LKPEDK--LNHVKRTS 654 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~--------tA~~iA~~~GI~~v~a~----------~~P~~K--~~~V~~l~ 654 (750)
+.|++++++++|++ .|+++.++|+.... .....-+..|++.++-. ..|.-. ...++++.
T Consensus 29 ~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~ 107 (173)
T PRK06769 29 LFPFTKASLQKLKA-NHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG 107 (173)
T ss_pred ECCCHHHHHHHHHH-CCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999999999 59999999987641 23444567889886632 123221 23333332
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
-. -+.+.||||..+|..|-++|++-..
T Consensus 108 ~~-p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 108 LD-LTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CC-HHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 22 2569999999999999999987544
No 112
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.80 E-value=0.016 Score=56.92 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=60.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhhc---CCe
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRDM---GGG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~~---g~~ 660 (750)
-++.|++.++++.|++ .|+++.++|+- ..+..+-+.+|+.+ +++ ...|.. ++.+...++. .+.
T Consensus 87 ~~~~~g~~~~l~~l~~-~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~--~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 87 AEVLPGIENFLKRLKK-KGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHP--ETFLLAAELLGVSPNE 161 (185)
T ss_pred CCCCcCHHHHHHHHHH-cCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCCh--HHHHHHHHHcCCCHHH
Confidence 4689999999999999 59999999986 56788888899853 333 123332 2333333221 356
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.||||..+|..+-+.|++-
T Consensus 162 ~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 162 CVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred eEEEeCcHhhHHHHHHCCCe
Confidence 89999999999999998774
No 113
>PRK09449 dUMP phosphatase; Provisional
Probab=95.76 E-value=0.039 Score=56.19 Aligned_cols=111 Identities=16% Similarity=0.298 Sum_probs=73.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cC----CHhhHHHHHHHHHhhcC----Ce
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SL----KPEDKLNHVKRTSRDMG----GG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~----~P~~K~~~V~~l~~~~g----~~ 660 (750)
++.|++.++++.|++ |+++.++|......+...-++.|+.+ +++ +- .|. .++.+...++.| ..
T Consensus 95 ~~~~g~~~~L~~L~~--~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~--p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 95 TPLPGAVELLNALRG--KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPD--VAIFDYALEQMGNPDRSR 170 (224)
T ss_pred ccCccHHHHHHHHHh--CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCC--HHHHHHHHHHcCCCCccc
Confidence 478999999999994 69999999999998888888999853 332 22 342 233333322223 46
Q ss_pred EEEEcCCc-cCHHHHHhCCcc-EEeCCCCcH-HHHhhcCEEEecCCCCCHHHH
Q 004479 661 LIMVGEGI-NDAPALAAATVG-IVLAQRASA-TAIAVADVLLLRNNISGVPFC 710 (750)
Q Consensus 661 VamvGDG~-NDapAL~~AdVG-Iamg~~~s~-~A~~aADivL~~~~l~~l~~~ 710 (750)
+.||||.. +|..+-++|.+- |.+...+.. .....+|+++ +++..+..+
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 221 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQL 221 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHH
Confidence 99999998 799999999975 444321211 1112467776 556555544
No 114
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.76 E-value=0.025 Score=57.32 Aligned_cols=111 Identities=13% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEecC-----CHhhH--HHHHHHH-HhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCSL-----KPEDK--LNHVKRT-SRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~~-----~P~~K--~~~V~~l-~~~~g~~V 661 (750)
++.|++.+.+++|++ . +++.++|+-.......+-+++|+.. +++.- .|+.. ...++.+ .-. -..+
T Consensus 97 ~~~~g~~~~L~~l~~-~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~~~ 173 (224)
T TIGR02254 97 QLLPGAFELMENLQQ-K-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS-KEEV 173 (224)
T ss_pred eeCccHHHHHHHHHh-c-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-chhe
Confidence 578999999999998 6 8999999999999999999999953 44321 24332 2223333 212 2569
Q ss_pred EEEcCCc-cCHHHHHhCCcc-EEeCCC-CcHHHHhhcCEEEecCCCCCHHH
Q 004479 662 IMVGEGI-NDAPALAAATVG-IVLAQR-ASATAIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 662 amvGDG~-NDapAL~~AdVG-Iamg~~-~s~~A~~aADivL~~~~l~~l~~ 709 (750)
.||||.. +|..+-+.+++- |..... .+......+|.++ ++++.|..
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 9999998 899999999863 333211 1211223456665 45555543
No 115
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.67 E-value=0.038 Score=53.94 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=65.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecC-CCHHHHHHHHHHcCCc---------e----EEecCCH-hhH--HHHHHHHHh
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTG-DHESSAQRVANAVGIN---------E----VYCSLKP-EDK--LNHVKRTSR 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTG-D~~~tA~~iA~~~GI~---------~----v~a~~~P-~~K--~~~V~~l~~ 655 (750)
-+++|++.+.++.|++ .|+++.++|+ |....+..+-+.+|+. . +++.-.| ..| ..+.+.+.+
T Consensus 44 ~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 3578999999999999 6999999996 4899999999999986 3 2222222 222 233444432
Q ss_pred hc-----CCeEEEEcCCccCHHHHHhCCccEEe
Q 004479 656 DM-----GGGLIMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 656 ~~-----g~~VamvGDG~NDapAL~~AdVGIam 683 (750)
.. -..+.||||...|..|-++|.+-...
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 21 25799999999999999988875543
No 116
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.66 E-value=0.025 Score=57.87 Aligned_cols=92 Identities=12% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cCCHhhH--HHHHHHHHhhc---CCeEE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SLKPEDK--LNHVKRTSRDM---GGGLI 662 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~~P~~K--~~~V~~l~~~~---g~~Va 662 (750)
-++.|++.+.++.|++ .|+++.++|.-+...+...-+..|+.+ +++ .-....| .++.+...++. ...+.
T Consensus 92 ~~~~~g~~e~L~~Lk~-~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKA-SGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHh-CCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 3578999999999999 599999999999999888888899853 332 2111122 33444333322 34699
Q ss_pred EEcCCccCHHHHHhCCcc--EEeCC
Q 004479 663 MVGEGINDAPALAAATVG--IVLAQ 685 (750)
Q Consensus 663 mvGDG~NDapAL~~AdVG--Iamg~ 685 (750)
||||..+|..+-++|++. +++..
T Consensus 171 ~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 999999999999999885 44443
No 117
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.66 E-value=0.027 Score=53.99 Aligned_cols=87 Identities=14% Similarity=0.254 Sum_probs=68.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcC----Cce------------------EEec--CCHhhHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVG----INE------------------VYCS--LKPEDKLNH 649 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~G----I~~------------------v~a~--~~P~~K~~~ 649 (750)
.++|+-++.++.++++ +++++++|+--..--..+=++++ |.. ++-. .---+|...
T Consensus 73 ~Idp~fKef~e~ike~-di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~v 151 (220)
T COG4359 73 KIDPGFKEFVEWIKEH-DIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV 151 (220)
T ss_pred ccCccHHHHHHHHHHc-CCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchh
Confidence 4789999999999995 99999999877777777777766 421 1111 112479999
Q ss_pred HHHHHhhcCCeEEEEcCCccCHHHHHhCCccEE
Q 004479 650 VKRTSRDMGGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 650 V~~l~~~~g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
|+.+++. ...+-|+|||+.|..|-+.+|+=.|
T Consensus 152 I~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 152 IHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred HHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 9999987 7889999999999999888887555
No 118
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.54 E-value=0.021 Score=56.02 Aligned_cols=83 Identities=17% Similarity=0.315 Sum_probs=58.3
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-----cCCHhhHHHHHHHHHhhcC---Ce
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-----SLKPEDKLNHVKRTSRDMG---GG 660 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-----~~~P~~K~~~V~~l~~~~g---~~ 660 (750)
.++.|++.++++.|++ .|+++.++|+... +..+-+.+|+.. ++. +..|+ .++.+...++.| ..
T Consensus 86 ~~~~pg~~~~L~~L~~-~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~--p~~~~~~~~~~~~~~~~ 160 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKK-NNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPD--PEIFLAAAEGLGVSPSE 160 (185)
T ss_pred cccCccHHHHHHHHHH-CCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCC--hHHHHHHHHHcCCCHHH
Confidence 3678999999999999 5999999997432 456788899864 221 12332 333333322212 46
Q ss_pred EEEEcCCccCHHHHHhCCcc
Q 004479 661 LIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVG 680 (750)
+.||||..+|..+-+.|++-
T Consensus 161 ~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 161 CIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred eEEEecCHHHHHHHHHcCCE
Confidence 99999999999999999873
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.50 E-value=0.039 Score=53.86 Aligned_cols=83 Identities=19% Similarity=0.295 Sum_probs=58.7
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-cCCHhhH------HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-SLKPEDK------LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~~~P~~K------~~~V~~l~~~~g~~Va 662 (750)
++.|++.+.++.|++ .|+++.++|+-.... ..+.+++|+.+ +++ +-....| ..+.+.+.-. ...+.
T Consensus 85 ~~~~g~~~~l~~l~~-~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~~~~ 161 (183)
T TIGR01509 85 KPLPGVEPLLEALRA-RGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PEECL 161 (183)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cceEE
Confidence 678999999999999 599999999988877 66666689853 333 2211222 2222222222 46799
Q ss_pred EEcCCccCHHHHHhCCc
Q 004479 663 MVGEGINDAPALAAATV 679 (750)
Q Consensus 663 mvGDG~NDapAL~~AdV 679 (750)
|+||...|..+-+++.+
T Consensus 162 ~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGM 178 (183)
T ss_pred EEcCCHHHHHHHHHcCC
Confidence 99999999988888876
No 120
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.50 E-value=0.018 Score=55.48 Aligned_cols=86 Identities=21% Similarity=0.425 Sum_probs=64.8
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc----eEEec-----CCHhhH--HHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN----EVYCS-----LKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~----~v~a~-----~~P~~K--~~~V~~l~~~~g~~V 661 (750)
.++.|++.+.++.|++ .|++++++|+-+......+.+++|+. .+++. ..|+.. ..+++++.-. .+.+
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-p~~~ 153 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP-PEEI 153 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-GGGE
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCC-cceE
Confidence 4678999999999998 59999999999999999999999986 34432 122221 2233333222 4679
Q ss_pred EEEcCCccCHHHHHhCCcc
Q 004479 662 IMVGEGINDAPALAAATVG 680 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVG 680 (750)
.||||..+|..+-++|++-
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999999999888763
No 121
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.46 E-value=0.032 Score=52.91 Aligned_cols=86 Identities=19% Similarity=0.368 Sum_probs=60.8
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCCc---eEEecC-------CHhhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGIN---EVYCSL-------KPEDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI~---~v~a~~-------~P~~K~~ 648 (750)
++.|++.++++.|++ .|+++.++|..+. .....+.+.+|+. .+++.. ...-|.+
T Consensus 27 ~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRA-AGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHH-CCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 468999999999999 5999999998762 4566777889986 233211 1122344
Q ss_pred HHHHHHhhcC---CeEEEEcCCccCHHHHHhCCcc
Q 004479 649 HVKRTSRDMG---GGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 649 ~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVG 680 (750)
+.+...++.| +.+.||||...|..+-+.+.+-
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 4444443323 5699999999999998888764
No 122
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.35 E-value=0.067 Score=56.86 Aligned_cols=112 Identities=18% Similarity=0.296 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc------eEE-ecCCHhhH--HHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN------EVY-CSLKPEDK--LNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~------~v~-a~~~P~~K--~~~V~~l~~~~---g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-+......+-+..++. .++ +...+..| .++.....++. ...+
T Consensus 144 ~l~pGv~elL~~L~~-~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 222 (286)
T PLN02779 144 PLRPGVLRLMDEALA-AGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRC 222 (286)
T ss_pred CchhhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHE
Confidence 578999999999999 59999999999888887776655321 232 11111112 22333222221 3569
Q ss_pred EEEcCCccCHHHHHhCCccEEeCCCC--cHHHHhhcCEEEecCCCCCHH
Q 004479 662 IMVGEGINDAPALAAATVGIVLAQRA--SATAIAVADVLLLRNNISGVP 708 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIamg~~~--s~~A~~aADivL~~~~l~~l~ 708 (750)
.||||..+|..|-++|++....-..+ +.-....+|+++ +++..+.
T Consensus 223 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 223 VVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 99999999999999999765433222 111224588887 6666655
No 123
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.35 E-value=0.059 Score=51.17 Aligned_cols=79 Identities=24% Similarity=0.411 Sum_probs=64.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhh--cCCeEEEEcCCc-c
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRD--MGGGLIMVGEGI-N 669 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~--~g~~VamvGDG~-N 669 (750)
...-|++++=++++|. +|+++.++|--++..+...++.+|++-++--..|--+. +-+.+++. .-+.|+||||-. -
T Consensus 45 ~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~-fr~Al~~m~l~~~~vvmVGDqL~T 122 (175)
T COG2179 45 PDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRA-FRRALKEMNLPPEEVVMVGDQLFT 122 (175)
T ss_pred CCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCceeecccCccHHH-HHHHHHHcCCChhHEEEEcchhhh
Confidence 4567899999999999 79999999999999999999999999999999998875 55555553 136799999973 4
Q ss_pred CHHH
Q 004479 670 DAPA 673 (750)
Q Consensus 670 DapA 673 (750)
|.-+
T Consensus 123 DVlg 126 (175)
T COG2179 123 DVLG 126 (175)
T ss_pred hhhc
Confidence 5443
No 124
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.25 E-value=0.05 Score=55.29 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=40.8
Q ss_pred HHHHHcCCc----eEEecCCHh--hHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEEe
Q 004479 627 RVANAVGIN----EVYCSLKPE--DKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 627 ~iA~~~GI~----~v~a~~~P~--~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIam 683 (750)
..-++.|+. ..+-+..|. .|..-++.+.+..| ..|+++||+.||.+||+.|+.|+|+
T Consensus 155 ~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 155 ALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 333444654 233445543 48888887766533 5699999999999999999999996
No 125
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.94 E-value=0.06 Score=51.16 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=57.6
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEecCC--HhhHHHHHHHHHhhcCC--eEEEEc
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCSLK--PEDKLNHVKRTSRDMGG--GLIMVG 665 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~~~--P~~K~~~V~~l~~~~g~--~VamvG 665 (750)
+..+++.+.++.|++ .|+++.++|+-....+....+.. +.. +++.-. +.-+.+....+.++.|- .+.|||
T Consensus 64 ~~~~g~~e~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iG 141 (154)
T TIGR01549 64 AYIRGAADLLKRLKE-AGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVG 141 (154)
T ss_pred eeccCHHHHHHHHHH-CcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEe
Confidence 345899999999998 59999999999999988887775 432 332211 12223444444333222 799999
Q ss_pred CCccCHHHHHhCC
Q 004479 666 EGINDAPALAAAT 678 (750)
Q Consensus 666 DG~NDapAL~~Ad 678 (750)
|..+|..|-++|.
T Consensus 142 Ds~~Di~aa~~aG 154 (154)
T TIGR01549 142 DNLNDIEGARNAG 154 (154)
T ss_pred CCHHHHHHHHHcc
Confidence 9999998877763
No 126
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.68 E-value=0.13 Score=50.32 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCH---------------HHHHHHHHHcCC--ceEEe-c---------------C
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHE---------------SSAQRVANAVGI--NEVYC-S---------------L 641 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~---------------~tA~~iA~~~GI--~~v~a-~---------------~ 641 (750)
+.|++.+++++|++ .|+++.++|.-+. .....+-.+.|+ +.++. - .
T Consensus 27 ~~pgv~e~L~~Lk~-~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 105 (176)
T TIGR00213 27 FIDGVIDALRELKK-MGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQVCDCR 105 (176)
T ss_pred ECCCHHHHHHHHHH-CCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccCCCCCC
Confidence 56899999999999 6999999997663 122233344444 34432 1 1
Q ss_pred CHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccE--EeCCCC--cHHHHhhcCEEEecCCCCCH
Q 004479 642 KPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAATVGI--VLAQRA--SATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 642 ~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGI--amg~~~--s~~A~~aADivL~~~~l~~l 707 (750)
.|+ .++++...++.| ..+.||||..+|..|-++|++.. ....+. .......+|.++ +++..|
T Consensus 106 KP~--p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~el 174 (176)
T TIGR00213 106 KPK--PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLADL 174 (176)
T ss_pred CCC--HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHHHh
Confidence 332 333333322212 56889999999999999999853 333211 111123488888 555544
No 127
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.60 E-value=0.42 Score=45.90 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=63.9
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH---HHHHH-----cCCc--eEEe--------------cCCHhh-H
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ---RVANA-----VGIN--EVYC--------------SLKPED-K 646 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~---~iA~~-----~GI~--~v~a--------------~~~P~~-K 646 (750)
+|.+.|+++++++++++ .|++++.+||-....+. ...++ .++. .++. .-.|+. |
T Consensus 25 ~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K 103 (157)
T smart00775 25 KDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFK 103 (157)
T ss_pred cCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHH
Confidence 47889999999999999 59999999999888774 44445 2342 1211 234554 8
Q ss_pred HHHHHHHHhh----cCCeEEEEcCCccCHHHHHhCCc
Q 004479 647 LNHVKRTSRD----MGGGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 647 ~~~V~~l~~~----~g~~VamvGDG~NDapAL~~AdV 679 (750)
.+.++.+++. ....++..||+.+|+.+-+++.|
T Consensus 104 ~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 104 IACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 8888888762 13567778999999999887765
No 128
>PLN02940 riboflavin kinase
Probab=94.57 E-value=0.1 Score=57.88 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=71.7
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-HcCCce----EEec-----CCHhhH--HHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN-AVGINE----VYCS-----LKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~-~~GI~~----v~a~-----~~P~~K--~~~V~~l~~~~g~~V 661 (750)
++.|++.+.++.|++ .|+++.++|+-....+...-+ ..|+.+ +++. ..|.-. ...++.+.-. .+.+
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~-p~~~ 170 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE-PSNC 170 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC-hhHE
Confidence 467999999999999 599999999999888887665 678743 3321 233222 2222222222 4669
Q ss_pred EEEcCCccCHHHHHhCCccE-EeCCC-CcHHHHhhcCEEEecCCCCC
Q 004479 662 IMVGEGINDAPALAAATVGI-VLAQR-ASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGI-amg~~-~s~~A~~aADivL~~~~l~~ 706 (750)
.||||..+|..|-+.|++.. ++... ........+|.++ +++..
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 99999999999999998763 33321 1222334567766 44444
No 129
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.49 E-value=0.11 Score=56.59 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=62.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCC---------------CHHHHHHHHHHcCCc--eEEecC--------CHhhHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGD---------------HESSAQRVANAVGIN--EVYCSL--------KPEDKL 647 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD---------------~~~tA~~iA~~~GI~--~v~a~~--------~P~~K~ 647 (750)
-++.|++.+.+++|++ .|+++.++|.= .......+.+..|+. .++... ...-|.
T Consensus 29 ~~l~pGV~e~L~~Lk~-~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p 107 (354)
T PRK05446 29 LAFEPGVIPALLKLQK-AGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKT 107 (354)
T ss_pred ceECcCHHHHHHHHHh-CCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCH
Confidence 4678999999999998 69999999982 244567788888875 333211 112234
Q ss_pred HHHHHHHhhc---CCeEEEEcCCccCHHHHHhCCccEE
Q 004479 648 NHVKRTSRDM---GGGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 648 ~~V~~l~~~~---g~~VamvGDG~NDapAL~~AdVGIa 682 (750)
.++..+.++. ...+.||||+.+|..+-+.|.+-..
T Consensus 108 ~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 108 GLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 4555444431 2679999999999999999887633
No 130
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.47 E-value=0.1 Score=48.33 Aligned_cols=80 Identities=9% Similarity=0.130 Sum_probs=58.0
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC-CHHHHHHHHHHcC-------Cce-----EEecCCHhhHHHHHHHHHhhcC--
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD-HESSAQRVANAVG-------INE-----VYCSLKPEDKLNHVKRTSRDMG-- 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD-~~~tA~~iA~~~G-------I~~-----v~a~~~P~~K~~~V~~l~~~~g-- 658 (750)
++.|++.+.++.|++ .|+++.++|+- .+..+..+-+..| +.. +.++-.|. .+.+....++.|
T Consensus 29 ~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pk--p~~~~~a~~~lg~~ 105 (128)
T TIGR01681 29 VTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPK--SPRLVEIALKLNGV 105 (128)
T ss_pred HHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcH--HHHHHHHHHHhcCC
Confidence 789999999999999 59999999999 8888888878777 443 22223453 333333333324
Q ss_pred ---CeEEEEcCCccCHHHHHh
Q 004479 659 ---GGLIMVGEGINDAPALAA 676 (750)
Q Consensus 659 ---~~VamvGDG~NDapAL~~ 676 (750)
..+.|+||...|.-+.+.
T Consensus 106 ~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 106 LKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCcceEEEECCCHhHHHHHHh
Confidence 679999999888776653
No 131
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.45 E-value=0.19 Score=51.99 Aligned_cols=90 Identities=13% Similarity=0.213 Sum_probs=62.4
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH--HHHHHcCCce-EEec-CCHhh-HHHHHHHHHhh---cC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ--RVANAVGINE-VYCS-LKPED-KLNHVKRTSRD---MG 658 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~--~iA~~~GI~~-v~a~-~~P~~-K~~~V~~l~~~---~g 658 (750)
|.+.-.+.+-|++++++++|++ .|+++.++|.-....+. ...+++|+.. .+-. +++.+ -...++...++ .+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~ 95 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDIRN 95 (242)
T ss_pred cccccCCccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccCCC
Confidence 5556678889999999999999 69999999996655444 5668899975 3333 23332 12333333222 14
Q ss_pred CeEEEEcCCccCHHHHHhC
Q 004479 659 GGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~A 677 (750)
..+.|+||+.+|...+...
T Consensus 96 ~~~~~vGd~~~d~~~~~~~ 114 (242)
T TIGR01459 96 GIIYLLGHLENDIINLMQC 114 (242)
T ss_pred ceEEEeCCcccchhhhcCC
Confidence 6799999999999988644
No 132
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.30 E-value=0.21 Score=48.30 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=60.6
Q ss_pred cCCCchhHHHHHHHHHhcCCc-EEEEecCC-------CHHHHHHHHHHcCCceE-EecCCHhhHHHHHHHHHhh----cC
Q 004479 592 EDRPRPGVSDVIAELKDHARL-RVMMLTGD-------HESSAQRVANAVGINEV-YCSLKPEDKLNHVKRTSRD----MG 658 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi-~v~mlTGD-------~~~tA~~iA~~~GI~~v-~a~~~P~~K~~~V~~l~~~----~g 658 (750)
++++-|+..+.+++|++..+. +++++|-- +...|..+++.+||.-+ |....|.-..++.+.++.+ .-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~~kKP~~~~~i~~~~~~~~~~~~p 136 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHRAKKPGCFREILKYFKCQKVVTSP 136 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeCCCCCccHHHHHHHHhhccCCCCc
Confidence 688899999999999995444 69999875 48899999999999854 5567997777777777643 13
Q ss_pred CeEEEEcCC
Q 004479 659 GGLIMVGEG 667 (750)
Q Consensus 659 ~~VamvGDG 667 (750)
+.++||||-
T Consensus 137 ~eiavIGDr 145 (168)
T PF09419_consen 137 SEIAVIGDR 145 (168)
T ss_pred hhEEEEcch
Confidence 569999996
No 133
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=94.04 E-value=0.2 Score=60.51 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=34.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.+-+++.+++++|++..|+.|+++||-............++
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l 554 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI 554 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe
Confidence 36789999999999845999999999999998887765654
No 134
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.89 E-value=0.17 Score=51.76 Aligned_cols=79 Identities=16% Similarity=0.346 Sum_probs=61.8
Q ss_pred CCchhHHHHHHHHHh-cCCcEEEEecCCCHHHHHHHHHHcCCce----EE----------------------ecCCH-hh
Q 004479 594 RPRPGVSDVIAELKD-HARLRVMMLTGDHESSAQRVANAVGINE----VY----------------------CSLKP-ED 645 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~-~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~----------------------a~~~P-~~ 645 (750)
|+.|+.++.++.|.+ ..|..+.++|-=|..--..+=+.-|+.. || .++.| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 577899999999932 2599999999999999999999999853 12 12233 35
Q ss_pred HHHHHHHHHhh---cC---CeEEEEcCCccCHH
Q 004479 646 KLNHVKRTSRD---MG---GGLIMVGEGINDAP 672 (750)
Q Consensus 646 K~~~V~~l~~~---~g---~~VamvGDG~NDap 672 (750)
|..+++++++. .| .+|.+||||.||--
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 99999988864 13 68999999999954
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.85 E-value=0.22 Score=52.07 Aligned_cols=82 Identities=10% Similarity=0.240 Sum_probs=60.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCC---HHHHHHHHHHcCCc-----eEEecCCHhhHHHHHHHHHhhcCCeEEE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDH---ESSAQRVANAVGIN-----EVYCSLKPEDKLNHVKRTSRDMGGGLIM 663 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~---~~tA~~iA~~~GI~-----~v~a~~~P~~K~~~V~~l~~~~g~~Vam 663 (750)
..++-|++.+.++.|++ .|+++.++|+-. .+.+...-+..|+. .++.+-....|....+.+.+. ..+++|
T Consensus 116 ~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~-y~Ivl~ 193 (266)
T TIGR01533 116 QAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKD-YEIVLL 193 (266)
T ss_pred CCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhc-CCEEEE
Confidence 35577999999999999 599999999955 34444566778984 466654444566666666555 567999
Q ss_pred EcCCccCHHHHH
Q 004479 664 VGEGINDAPALA 675 (750)
Q Consensus 664 vGDG~NDapAL~ 675 (750)
+||-.+|-....
T Consensus 194 vGD~~~Df~~~~ 205 (266)
T TIGR01533 194 FGDNLLDFDDFF 205 (266)
T ss_pred ECCCHHHhhhhh
Confidence 999999986543
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.58 E-value=0.18 Score=50.30 Aligned_cols=82 Identities=17% Similarity=0.259 Sum_probs=57.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEe-c----CCHhhHHHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYC-S----LKPEDKLNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a-~----~~P~~K~~~V~~l~~~~---g~~V 661 (750)
++-|++.++++.|++ .|+++.++|+-... ...+-+.+|+.. ++. . ..|+- ++.+...++. ...+
T Consensus 105 ~~~~g~~~~l~~L~~-~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~--~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 105 QVYPDAIKLLKDLRE-RGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDP--KIFQEALERAGISPEEA 180 (203)
T ss_pred eeCcCHHHHHHHHHH-CCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCH--HHHHHHHHHcCCChhHE
Confidence 577999999999998 59999999976554 577778889853 332 1 13332 2333322221 3579
Q ss_pred EEEcCCc-cCHHHHHhCCc
Q 004479 662 IMVGEGI-NDAPALAAATV 679 (750)
Q Consensus 662 amvGDG~-NDapAL~~AdV 679 (750)
.||||.. +|..+-++|.+
T Consensus 181 ~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred EEECCCchHHHHHHHHcCC
Confidence 9999997 89988888765
No 137
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.50 E-value=0.06 Score=51.17 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=63.7
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----EEe-cCCHhhHHHHHHHHHhh--cCCeEEE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-----VYC-SLKPEDKLNHVKRTSRD--MGGGLIM 663 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-----v~a-~~~P~~K~~~V~~l~~~--~g~~Vam 663 (750)
.-++||++.+.++.|++ ++++.+.|.=+...+..+-+.+|+.. +++ +-....|-.+.+.+++- .-..+.|
T Consensus 43 ~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEE
Confidence 34579999999999985 69999999999999999999998843 222 12222232255555432 1367999
Q ss_pred EcCCccCHHHHHhCCccE
Q 004479 664 VGEGINDAPALAAATVGI 681 (750)
Q Consensus 664 vGDG~NDapAL~~AdVGI 681 (750)
|||..+|..+-+++.|-|
T Consensus 121 i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPENLIPI 138 (148)
T ss_pred EECCHHHhhcCccCEEEe
Confidence 999999999876665544
No 138
>PLN02811 hydrolase
Probab=93.43 E-value=0.1 Score=53.01 Aligned_cols=87 Identities=17% Similarity=0.285 Sum_probs=56.8
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH-HHHHHcCCc----eEEecC-------CHhhH--HHHHHHHH---h
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ-RVANAVGIN----EVYCSL-------KPEDK--LNHVKRTS---R 655 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~-~iA~~~GI~----~v~a~~-------~P~~K--~~~V~~l~---~ 655 (750)
-++.|++.+.++.|++ .|+++.++||-+..... ..-+..|+. .+++.- .|+-. ...++.+. -
T Consensus 77 ~~l~~gv~e~l~~L~~-~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHA-KGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHH-CCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 3578999999999999 69999999998765433 233333443 233322 12211 22223331 1
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCccE
Q 004479 656 DMGGGLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 656 ~~g~~VamvGDG~NDapAL~~AdVGI 681 (750)
. .+.+.||||...|..|-++|++-.
T Consensus 156 ~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 156 D-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred C-ccceEEEeccHhhHHHHHHCCCeE
Confidence 1 256999999999999999998754
No 139
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.08 E-value=0.38 Score=46.63 Aligned_cols=84 Identities=10% Similarity=0.130 Sum_probs=56.4
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCH------------HHHHHHHHHcCCce--EEe-cC--CHhhHHHHHHHHHhhcC
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHE------------SSAQRVANAVGINE--VYC-SL--KPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~------------~tA~~iA~~~GI~~--v~a-~~--~P~~K~~~V~~l~~~~g 658 (750)
-|++.++++.|++ .|+++.++|.-.. .....+-+.+|+.. +++ +- .+.-+.+.++.+.++.|
T Consensus 44 ~pgv~e~L~~Lk~-~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~ 122 (166)
T TIGR01664 44 YPEIPAKLQELDD-EGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAGLYRKPMTGMWEYLQSQYN 122 (166)
T ss_pred cCCHHHHHHHHHH-CCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCccHHHHHHHHHcC
Confidence 4899999999999 6999999997544 24567788899863 221 11 11112334444433324
Q ss_pred -----CeEEEEcCCc--------cCHHHHHhCCcc
Q 004479 659 -----GGLIMVGEGI--------NDAPALAAATVG 680 (750)
Q Consensus 659 -----~~VamvGDG~--------NDapAL~~AdVG 680 (750)
..+.||||.. +|..+-++|++-
T Consensus 123 ~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 123 SPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 5699999986 688888887663
No 140
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.00 E-value=4.1 Score=46.73 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.7
Q ss_pred cCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEEece
Q 004479 237 VSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVYQGT 274 (750)
Q Consensus 237 ~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl~G~ 274 (750)
+|||...++|..-++.||||-++||+.-||.++=++|.
T Consensus 161 fRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 161 FRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred hccCeeeecceeEEEeccEEEecCCccccccccccCCC
Confidence 57889999999999999999999999999998877764
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.88 E-value=0.33 Score=46.87 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=61.5
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCC---------------CHHHHHHHHHHcCCc--eEE-e-----cCCH--hhHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGD---------------HESSAQRVANAVGIN--EVY-C-----SLKP--EDKLN 648 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD---------------~~~tA~~iA~~~GI~--~v~-a-----~~~P--~~K~~ 648 (750)
++-|++.+++++|++ .|+++.++|-- .......+.+..|+. .++ + .... .-|..
T Consensus 29 ~~~pgv~e~L~~L~~-~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~ 107 (161)
T TIGR01261 29 RFEKGVIPALLKLKK-AGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIK 107 (161)
T ss_pred eECCCHHHHHHHHHH-CCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 356899999999999 59999999974 245677888888886 333 2 1111 12234
Q ss_pred HHHHHHhhcC---CeEEEEcCCccCHHHHHhCCccEE
Q 004479 649 HVKRTSRDMG---GGLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 649 ~V~~l~~~~g---~~VamvGDG~NDapAL~~AdVGIa 682 (750)
+++.+.++.| ..+.||||+.+|..+-+.|.+-..
T Consensus 108 ~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 108 LLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 4444443323 459999999999999998887643
No 142
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.72 E-value=0.33 Score=52.47 Aligned_cols=90 Identities=10% Similarity=0.179 Sum_probs=72.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH----cCCceEEec--CCHhhHHHHHHHHHhhcC---CeEEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA----VGINEVYCS--LKPEDKLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~----~GI~~v~a~--~~P~~K~~~V~~l~~~~g---~~Vamv 664 (750)
++.+++.++++.|++ .|+.+.++|.-+...|..+-++ +|+.+.|.. ..++.|.+.++.+.++.| ..++||
T Consensus 31 ~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfi 109 (320)
T TIGR01686 31 PLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFI 109 (320)
T ss_pred ccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEE
Confidence 458999999999999 5999999999999999999999 888653322 345567776666655423 679999
Q ss_pred cCCccCHHHHHhCCccEEeC
Q 004479 665 GEGINDAPALAAATVGIVLA 684 (750)
Q Consensus 665 GDG~NDapAL~~AdVGIamg 684 (750)
||-..|..+.+++..++.+-
T Consensus 110 dD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 110 DDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CCCHHHHHHHHHHCCCCccC
Confidence 99999999999998886553
No 143
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.57 E-value=0.45 Score=47.31 Aligned_cols=96 Identities=21% Similarity=0.383 Sum_probs=69.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE----------------------E----ecCCHhh-
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV----------------------Y----CSLKPED- 645 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v----------------------~----a~~~P~~- 645 (750)
=|+-|+..++|+.+++.+-..++++|--|..--..+-+..||.+. + |...|..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence 367799999999999964359999999999999999999998521 1 2334433
Q ss_pred -HHHHHHHHHhhc---C---CeEEEEcCCccC-HHHHHhCCccEEeCCCCc
Q 004479 646 -KLNHVKRTSRDM---G---GGLIMVGEGIND-APALAAATVGIVLAQRAS 688 (750)
Q Consensus 646 -K~~~V~~l~~~~---g---~~VamvGDG~ND-apAL~~AdVGIamg~~~s 688 (750)
|..++..++... | .++-++|||.|| +|.++...--++|-..|=
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCC
Confidence 777777776531 1 379999999999 577766655567765443
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.48 E-value=0.62 Score=47.40 Aligned_cols=89 Identities=12% Similarity=0.163 Sum_probs=62.1
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHc---CC----ceEEe---cCCHhhH--HHHHHHHHhhcCC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV---GI----NEVYC---SLKPEDK--LNHVKRTSRDMGG 659 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI----~~v~a---~~~P~~K--~~~V~~l~~~~g~ 659 (750)
+-++.||+.+++++|++ .|+++.++|..+......+-+.. ++ +.+|. ...|+-. ..+.+++.-. ..
T Consensus 93 ~~~lypgv~e~L~~Lk~-~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~ 170 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQ-LGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PR 170 (220)
T ss_pred ccCcCcCHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hh
Confidence 45789999999999999 69999999999888777776665 33 22222 1223222 2223333222 25
Q ss_pred eEEEEcCCccCHHHHHhCCccEE
Q 004479 660 GLIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGIa 682 (750)
.+.|+||...|..|-++|++-..
T Consensus 171 e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 171 EILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEE
Confidence 69999999999999999988643
No 145
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.04 E-value=0.83 Score=45.42 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 598 GVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 598 ~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
.+...+.+|++ +|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCC
Confidence 57788999999 79999999998888888888888874
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.64 E-value=0.16 Score=52.62 Aligned_cols=69 Identities=19% Similarity=0.096 Sum_probs=49.2
Q ss_pred EecCCHhhHHHHHHHHHhhcC---CeEEEEcCCccCHHHHHhC--------CccEEeCCCCcHHHHhhcCEEEecCCCCC
Q 004479 638 YCSLKPEDKLNHVKRTSRDMG---GGLIMVGEGINDAPALAAA--------TVGIVLAQRASATAIAVADVLLLRNNISG 706 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~~g---~~VamvGDG~NDapAL~~A--------dVGIamg~~~s~~A~~aADivL~~~~l~~ 706 (750)
..+-.+-+|...++.+.++.+ ..++|+||+.||.+|++.+ ..||+|+. +. .+..|++++ ++...
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~-g~--~~~~A~~~~--~~~~~ 234 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS-GS--KKTVAKFHL--TGPQQ 234 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEec-CC--cCCCceEeC--CCHHH
Confidence 334446689998888876533 4699999999999999988 47888853 21 245688888 45555
Q ss_pred HHHHH
Q 004479 707 VPFCV 711 (750)
Q Consensus 707 l~~~i 711 (750)
+...+
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 55444
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.24 E-value=0.57 Score=58.75 Aligned_cols=110 Identities=17% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc-e----EE-e----cCCHhhH--HHHHHHHHhhcCCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN-E----VY-C----SLKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~-~----v~-a----~~~P~~K--~~~V~~l~~~~g~~V 661 (750)
.+.|++.+.+++|++ .|+++.++|+-....+..+-++.|+. . ++ + +..|+.. ....+++.-. ...+
T Consensus 161 ~~~pG~~elL~~Lk~-~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~-p~e~ 238 (1057)
T PLN02919 161 IGFPGALELITQCKN-KGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVP-TSEC 238 (1057)
T ss_pred ccCccHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcC-cccE
Confidence 467999999999999 69999999999999999888999984 2 22 1 2233322 2222332222 3569
Q ss_pred EEEcCCccCHHHHHhCCc-cEEeCCC--CcHHHHhhcCEEEecCCCCCH
Q 004479 662 IMVGEGINDAPALAAATV-GIVLAQR--ASATAIAVADVLLLRNNISGV 707 (750)
Q Consensus 662 amvGDG~NDapAL~~AdV-GIamg~~--~s~~A~~aADivL~~~~l~~l 707 (750)
.||||..+|+.|-++|.+ -|.+... ..+.....+|+++ +++..+
T Consensus 239 v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 239 VVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 999999999999999987 3334322 2223345678887 555554
No 148
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.90 E-value=0.45 Score=47.30 Aligned_cols=86 Identities=17% Similarity=0.224 Sum_probs=57.3
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce--------EE-ecCCHhhHHHHHHHHHhhcC-CeEEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE--------VY-CSLKPEDKLNHVKRTSRDMG-GGLIM 663 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~--------v~-a~~~P~~K~~~V~~l~~~~g-~~Vam 663 (750)
++.|++.++++.|++ .+ +.+++|.-+..+....-+.+|+.. ++ ++... -|.++++...++.| ..++|
T Consensus 74 ~~~pG~~e~L~~L~~-~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~ 150 (197)
T PHA02597 74 SAYDDALDVINKLKE-DY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCF 150 (197)
T ss_pred cCCCCHHHHHHHHHh-cC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEE
Confidence 468999999999998 45 566677655555554556666642 21 33332 24555555544434 35889
Q ss_pred EcCCccCHHHHHhC--CccEE
Q 004479 664 VGEGINDAPALAAA--TVGIV 682 (750)
Q Consensus 664 vGDG~NDapAL~~A--dVGIa 682 (750)
|||-.+|..|-++| ++-..
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEE
Confidence 99999999999999 88543
No 149
>PTZ00174 phosphomannomutase; Provisional
Probab=90.63 E-value=0.21 Score=51.77 Aligned_cols=59 Identities=19% Similarity=0.238 Sum_probs=46.6
Q ss_pred EecCCH--hhHHHHHHHHHhhcCCeEEEEcC----CccCHHHHHhC-CccEEeCCCCcHHHHhhcCEE
Q 004479 638 YCSLKP--EDKLNHVKRTSRDMGGGLIMVGE----GINDAPALAAA-TVGIVLAQRASATAIAVADVL 698 (750)
Q Consensus 638 ~a~~~P--~~K~~~V~~l~~~~g~~VamvGD----G~NDapAL~~A-dVGIamg~~~s~~A~~aADiv 698 (750)
+-+..| -+|..-++.|.++ -..|+.+|| |-||.+||+.| -.|+++++ +.+..+..+.++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n-~~~~~~~~~~~~ 244 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN-PEDTIKILKELF 244 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC-HHHHHHHHHHHh
Confidence 335555 4799999999887 678999999 99999999976 68888884 777777666544
No 150
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.80 E-value=0.39 Score=48.31 Aligned_cols=86 Identities=16% Similarity=0.219 Sum_probs=56.0
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHH--HHHHHHHcCC----ceEEec-----CCHhhHH--HHHHHHHhhcCC
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESS--AQRVANAVGI----NEVYCS-----LKPEDKL--NHVKRTSRDMGG 659 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t--A~~iA~~~GI----~~v~a~-----~~P~~K~--~~V~~l~~~~g~ 659 (750)
-++.|++.+.++.|++ .|+++.++|...... ........|+ +.+++. ..|+-.. ...+++.-. ..
T Consensus 93 ~~~~~~~~~~L~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~-~~ 170 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRA-KGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA-PE 170 (211)
T ss_pred cccChhHHHHHHHHHH-CCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC-HH
Confidence 4578999999999999 599999999865433 3322333454 334432 2344322 222222212 35
Q ss_pred eEEEEcCCccCHHHHHhCCcc
Q 004479 660 GLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVG 680 (750)
.+.||||...|..+-++|++-
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCE
Confidence 689999999999999999874
No 151
>PLN02580 trehalose-phosphatase
Probab=88.32 E-value=0.64 Score=51.06 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=49.5
Q ss_pred EecCCHh---hHHHHHHHHHhhcC-----C-eEEEEcCCccCHHHHHh-----CCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 638 YCSLKPE---DKLNHVKRTSRDMG-----G-GLIMVGEGINDAPALAA-----ATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 638 ~a~~~P~---~K~~~V~~l~~~~g-----~-~VamvGDG~NDapAL~~-----AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
+-++.|. +|..-|+.+.+..| . .+.++||+.||-.|++. +++||+||. +.. .-.|++.| ++
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~--~t~A~y~L--~d 365 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPK--ESNAFYSL--RD 365 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCC--CccceEEc--CC
Confidence 3456664 89999999887643 1 25899999999999996 689999985 322 22577877 55
Q ss_pred CCCHHHHHH
Q 004479 704 ISGVPFCVA 712 (750)
Q Consensus 704 l~~l~~~i~ 712 (750)
...+...++
T Consensus 366 p~eV~~~L~ 374 (384)
T PLN02580 366 PSEVMEFLK 374 (384)
T ss_pred HHHHHHHHH
Confidence 555555443
No 152
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=88.08 E-value=1.8 Score=44.93 Aligned_cols=74 Identities=20% Similarity=0.349 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCcEEEEe-cCCCHHHHHHHHHHcCCceEEecCCH--hhHHHHHHHHHhhcC---CeEEEEcCCccCHH
Q 004479 599 VSDVIAELKDHARLRVMML-TGDHESSAQRVANAVGINEVYCSLKP--EDKLNHVKRTSRDMG---GGLIMVGEGINDAP 672 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~ml-TGD~~~tA~~iA~~~GI~~v~a~~~P--~~K~~~V~~l~~~~g---~~VamvGDG~NDap 672 (750)
..+.-+.|++ .|+++.++ +++. +-...| ..|..-|+.++++.| ..|..+||..||.+
T Consensus 133 ~~~i~~~l~~-~~l~~~~i~s~~~----------------~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~ 195 (247)
T PF05116_consen 133 LEEIRARLRQ-RGLRVNVIYSNGR----------------DLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLE 195 (247)
T ss_dssp HHHHHHHHHC-CTCEEEEEECTCC----------------EEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHH
T ss_pred HHHHHHHHHH-cCCCeeEEEccce----------------eEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHH
Confidence 3444444555 79998766 3432 233334 469999999887643 35777999999999
Q ss_pred HHHhCCccEEeCCCCcHH
Q 004479 673 ALAAATVGIVLAQRASAT 690 (750)
Q Consensus 673 AL~~AdVGIamg~~~s~~ 690 (750)
||..++-||.+|+ +.+.
T Consensus 196 mL~~~~~~vvV~N-a~~e 212 (247)
T PF05116_consen 196 MLEGGDHGVVVGN-AQPE 212 (247)
T ss_dssp HHCCSSEEEE-TT-S-HH
T ss_pred HHcCcCCEEEEcC-CCHH
Confidence 9999999999997 4444
No 153
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=87.54 E-value=1.3 Score=44.81 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=60.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ec-CCHhhH--HHHHHHHHhhcC---CeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CS-LKPEDK--LNHVKRTSRDMG---GGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~-~~P~~K--~~~V~~l~~~~g---~~V 661 (750)
-++.|++.+.++.| ++++.++|+.....+...=+..|+...| +. -....| -++.....++.| ..+
T Consensus 87 ~~~~~gv~~~L~~L----~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 87 LEPIAGANALLESI----TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred CCcCCCHHHHHHHc----CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 35668999998887 3789999999988888888888986433 21 111112 233333333223 569
Q ss_pred EEEcCCccCHHHHHhCCccEEe
Q 004479 662 IMVGEGINDAPALAAATVGIVL 683 (750)
Q Consensus 662 amvGDG~NDapAL~~AdVGIam 683 (750)
+||||..+|..+=++|.+-...
T Consensus 163 l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEEEE
Confidence 9999999999999999877653
No 154
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=87.33 E-value=0.56 Score=41.38 Aligned_cols=85 Identities=20% Similarity=0.289 Sum_probs=53.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH---HHcCCc----eEEecCCHhhHHHHHHHHHh-hcC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA---NAVGIN----EVYCSLKPEDKLNHVKRTSR-DMG 658 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA---~~~GI~----~v~a~~~P~~K~~~V~~l~~-~~g 658 (750)
|++...+++=|++.++|+.|++ .|++++++|-....+...++ +.+|+. +++.... ...+.|++ ..+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~-----~~~~~l~~~~~~ 80 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM-----AAAEYLKEHKGG 80 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-----HHHHHHHHHTTS
T ss_pred cEeEeCCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-----HHHHHHHhcCCC
Confidence 4455577888999999999999 69999999998755544444 667885 2322211 12333443 237
Q ss_pred CeEEEEcCCccCHHHHHhCC
Q 004479 659 GGLIMVGEGINDAPALAAAT 678 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~Ad 678 (750)
++|.++|.. .....|+.++
T Consensus 81 ~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 81 KKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp SEEEEES-H-HHHHHHHHTT
T ss_pred CEEEEEcCH-HHHHHHHHcC
Confidence 899999975 5555565554
No 155
>PLN02645 phosphoglycolate phosphatase
Probab=87.06 E-value=1.4 Score=47.47 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=59.4
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH---HHcCCc----eEEecCCHhhHHHHHHHHHhhcCC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA---NAVGIN----EVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA---~~~GI~----~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
|++.-.+.+=|++.++|+.||+ .|++++++|+....+...++ +++|+. +|+....+ ....++...-..++
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~~--~~~~l~~~~~~~~~ 113 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFA--AAAYLKSINFPKDK 113 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHHH--HHHHHHhhccCCCC
Confidence 5666667777999999999999 59999999999977766666 568874 23332221 11222211111134
Q ss_pred eEEEEcCCccCHHHHHhCCccE
Q 004479 660 GLIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~AdVGI 681 (750)
+ .++++...|..+++.+++=.
T Consensus 114 ~-V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 114 K-VYVIGEEGILEELELAGFQY 134 (311)
T ss_pred E-EEEEcCHHHHHHHHHCCCEE
Confidence 5 45555568899999887643
No 156
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=86.90 E-value=2.6 Score=41.96 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=56.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH-HHcCC----ceEEec-----CCHhhHHHHHHHHHhhc---CCe
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVA-NAVGI----NEVYCS-----LKPEDKLNHVKRTSRDM---GGG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA-~~~GI----~~v~a~-----~~P~~K~~~V~~l~~~~---g~~ 660 (750)
++.|++.++++.|++ .|+++.++|.-+.......- +..|+ +.+++. ..|+ .++.+...++. ...
T Consensus 84 ~~~~g~~e~L~~l~~-~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~--p~~~~~~~~~~~~~p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLRE-QGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPE--ARIYQHVLQAEGFSAAD 160 (199)
T ss_pred ccCHHHHHHHHHHHh-CCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCC--HHHHHHHHHHcCCChhH
Confidence 478999999999999 59999999997766554432 22344 233321 2342 33333332221 356
Q ss_pred EEEEcCCccCHHHHHhCCccE
Q 004479 661 LIMVGEGINDAPALAAATVGI 681 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGI 681 (750)
+.||||...|..+-++|++-.
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITS 181 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEE
Confidence 899999999998888888743
No 157
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=86.52 E-value=3.3 Score=42.27 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=54.4
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHH---HHHHHHHcCCce---EEecC-CHhh------HHHHHHHHHhhcC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESS---AQRVANAVGINE---VYCSL-KPED------KLNHVKRTSRDMG 658 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t---A~~iA~~~GI~~---v~a~~-~P~~------K~~~V~~l~~~~g 658 (750)
+-|.-|++.+.++.|++ .|++|+++||-.+.. +..--++.|+.. ++-|- .... |.+.=+++.++.-
T Consensus 118 ~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GY 196 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGY 196 (229)
T ss_pred CCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCc
Confidence 34778999999999999 599999999988655 323334568763 34442 1112 6666666666523
Q ss_pred CeEEEEcCCccCH
Q 004479 659 GGLIMVGEGINDA 671 (750)
Q Consensus 659 ~~VamvGDG~NDa 671 (750)
++++.+||-.+|-
T Consensus 197 rIv~~iGDq~sDl 209 (229)
T TIGR01675 197 RIWGNIGDQWSDL 209 (229)
T ss_pred eEEEEECCChHHh
Confidence 5678899988885
No 158
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=85.82 E-value=1.8 Score=42.36 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=57.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec-CC--HhhHHHHHHHHHhhcC---CeEEEE
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS-LK--PEDKLNHVKRTSRDMG---GGLIMV 664 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~-~~--P~~K~~~V~~l~~~~g---~~Vamv 664 (750)
+-|+ .+.++.|++ ++++.++||.....+..+-+..|+.. +++. -. +.-+.++.+...++.| ..+.||
T Consensus 89 ~~~~-~e~L~~L~~--~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 165 (188)
T PRK10725 89 PLPL-IEVVKAWHG--RRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVF 165 (188)
T ss_pred CccH-HHHHHHHHh--CCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 3354 689999986 37999999999999999999999964 3322 11 1112233333332223 458899
Q ss_pred cCCccCHHHHHhCCcc
Q 004479 665 GEGINDAPALAAATVG 680 (750)
Q Consensus 665 GDG~NDapAL~~AdVG 680 (750)
||..+|..+-+.|++-
T Consensus 166 gDs~~di~aA~~aG~~ 181 (188)
T PRK10725 166 EDADFGIQAARAAGMD 181 (188)
T ss_pred eccHhhHHHHHHCCCE
Confidence 9999999999998864
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=85.25 E-value=2 Score=42.03 Aligned_cols=82 Identities=21% Similarity=0.423 Sum_probs=57.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EEec---------CCHhhH--HHHHHHHHhhcC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VYCS---------LKPEDK--LNHVKRTSRDMG 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~a~---------~~P~~K--~~~V~~l~~~~g 658 (750)
++.+++.+++++|+ .++.++|.-+...+..+-+++|+.. +++. ..|+.. ...++.+... .
T Consensus 84 ~~~~g~~~~L~~L~----~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~-~ 158 (184)
T TIGR01993 84 KPDPELRNLLLRLP----GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD-P 158 (184)
T ss_pred CCCHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC-c
Confidence 46789999999886 2588999999999999999999953 4432 244322 2222333222 3
Q ss_pred CeEEEEcCCccCHHHHHhCCcc
Q 004479 659 GGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdVG 680 (750)
..+.||||...|..+=++|.+-
T Consensus 159 ~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 159 ERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred cceEEEeCCHHHHHHHHHcCCE
Confidence 5689999999998888887764
No 160
>PRK10444 UMP phosphatase; Provisional
Probab=83.60 E-value=3.1 Score=43.15 Aligned_cols=84 Identities=21% Similarity=0.345 Sum_probs=58.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHc---CCc----eEEecCCHhhHHHHHHHHHhhcCC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV---GIN----EVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~---GI~----~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
|.+.-.+.+=|++.++++.|++ .|++++++|+....+...+++++ |++ +++ +|.. ...+.|++..+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~~~~~L~~~~~~ 83 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY---TSAM--ATADFLRRQEGK 83 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe---cHHH--HHHHHHHhCCCC
Confidence 6666778889999999999999 59999999999998888888774 762 342 3433 333445443256
Q ss_pred eEEEEcCCccCHHHHHhC
Q 004479 660 GLIMVGEGINDAPALAAA 677 (750)
Q Consensus 660 ~VamvGDG~NDapAL~~A 677 (750)
+|.++|.. --...|+.+
T Consensus 84 ~v~~~g~~-~l~~~l~~~ 100 (248)
T PRK10444 84 KAYVIGEG-ALIHELYKA 100 (248)
T ss_pred EEEEEcCH-HHHHHHHHC
Confidence 78888873 223344443
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.59 E-value=8.1 Score=44.29 Aligned_cols=109 Identities=13% Similarity=0.164 Sum_probs=74.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCceEEec-------------------CCHhhHHHHHHHHH
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGINEVYCS-------------------LKPEDKLNHVKRTS 654 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~~v~a~-------------------~~P~~K~~~V~~l~ 654 (750)
+++++.+.+ ++ .|. ++++|+=...-++.+|++ +|++.|.|. +.=++|.+-+++..
T Consensus 111 l~~~a~~~~---~~-~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWRVF---NS-FGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHHHH---Hh-CCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 777766654 45 364 499999999999999987 899865321 23356888887543
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCccEEeCCCCcH-HH--HhhcCEEEecCCCCCHHH
Q 004479 655 RDMGGGLIMVGEGINDAPALAAATVGIVLAQRASA-TA--IAVADVLLLRNNISGVPF 709 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~AdVGIamg~~~s~-~A--~~aADivL~~~~l~~l~~ 709 (750)
.. ....-..||..||.|+|+.||-...++...-. .. +--..+|.-|..|..-|.
T Consensus 186 g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~p~ 242 (497)
T PLN02177 186 GD-ALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQRPT 242 (497)
T ss_pred CC-CCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCCCC
Confidence 21 11225789999999999999999999862200 11 113467777777666554
No 162
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=76.61 E-value=1.2 Score=43.03 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=58.1
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-----EEec-CCHhhHHHHHHHHHhh--cCCeEEE
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-----VYCS-LKPEDKLNHVKRTSRD--MGGGLIM 663 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-----v~a~-~~P~~K~~~V~~l~~~--~g~~Vam 663 (750)
.=..||++.+.+++|++ . .++++.|--.+..|..+.+.++... +++| .....|-.+++.|..- .-..|.|
T Consensus 40 ~v~~RPgl~eFL~~l~~-~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIi 117 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSK-W-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVII 117 (162)
T ss_pred EEEECCCHHHHHHHHHh-c-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEE
Confidence 33589999999999987 3 8999999999999999999999753 2222 1111122244545432 1257999
Q ss_pred EcCCccCHHHHHhC
Q 004479 664 VGEGINDAPALAAA 677 (750)
Q Consensus 664 vGDG~NDapAL~~A 677 (750)
|||...|..+=.++
T Consensus 118 VDD~~~~~~~~~~N 131 (162)
T TIGR02251 118 IDNSPYSYSLQPDN 131 (162)
T ss_pred EeCChhhhccCccC
Confidence 99988776544333
No 163
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=75.70 E-value=4.1 Score=41.74 Aligned_cols=78 Identities=15% Similarity=0.288 Sum_probs=53.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCC---HHHHHHHHHHcCCc---eEEecCCH--------hhHHHHHHHHHhhcC-
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDH---ESSAQRVANAVGIN---EVYCSLKP--------EDKLNHVKRTSRDMG- 658 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~---~~tA~~iA~~~GI~---~v~a~~~P--------~~K~~~V~~l~~~~g- 658 (750)
+.=|++.+.++.+++ .|++|+.+||-+ ...+..=-++.|+. .++-|... +-|...-+.++++ |
T Consensus 115 ~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-Gy 192 (229)
T PF03767_consen 115 PAIPGALELYNYARS-RGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKK-GY 192 (229)
T ss_dssp EEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHT-TE
T ss_pred cccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHc-CC
Confidence 444789999999999 599999999943 33334444566773 33333222 2377777777776 4
Q ss_pred CeEEEEcCCccCHHH
Q 004479 659 GGLIMVGEGINDAPA 673 (750)
Q Consensus 659 ~~VamvGDG~NDapA 673 (750)
++++++||-.+|-..
T Consensus 193 ~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 193 RIIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEEESSGGGCHC
T ss_pred cEEEEeCCCHHHhhc
Confidence 568889999999765
No 164
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=75.56 E-value=12 Score=37.79 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=58.2
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceE---------EecCCHhhHHHHHHHHHhh--cCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEV---------YCSLKPEDKLNHVKRTSRD--MGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v---------~a~~~P~~K~~~V~~l~~~--~g~~Va 662 (750)
++-+++.+++++|+++ .++.++|--.........+++|+... .....|+-+. +-..+++. ....+.
T Consensus 99 ~~~~~~~~~L~~l~~~--~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~-f~~~~~~~g~~p~~~l 175 (229)
T COG1011 99 PDYPEALEALKELGKK--YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEI-FEYALEKLGVPPEEAL 175 (229)
T ss_pred ccChhHHHHHHHHHhh--ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHH-HHHHHHHcCCCcceEE
Confidence 5668889999999883 88999998788888899999998531 2334554443 33334333 024699
Q ss_pred EEcCC-ccC-HHHHHhCCccEEeC
Q 004479 663 MVGEG-IND-APALAAATVGIVLA 684 (750)
Q Consensus 663 mvGDG-~ND-apAL~~AdVGIamg 684 (750)
||||. .|| .+|.+.-=-++-+.
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEEC
Confidence 99996 788 45544332334444
No 165
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=74.96 E-value=13 Score=38.43 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=56.2
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecC---CCHHHHHHHHHHcCCce----EEecCCHhhHHHHHHHHHhh-cC
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTG---DHESSAQRVANAVGINE----VYCSLKPEDKLNHVKRTSRD-MG 658 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTG---D~~~tA~~iA~~~GI~~----v~a~~~P~~K~~~V~~l~~~-~g 658 (750)
|.+.-.+.+=|++.++|++|++ .|++++++|| -..+......+++|++. ++.... ..++.+++. .+
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~-----~~~~~l~~~~~~ 83 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASM-----ATADYMNDLKLE 83 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHH-----HHHHHHHhcCCC
Confidence 4555567777899999999999 5999999997 55777777778888852 221111 122223322 24
Q ss_pred CeEEEEcCCccCHHHHHhCCc
Q 004479 659 GGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 659 ~~VamvGDG~NDapAL~~AdV 679 (750)
++|..+|.. .....+..+++
T Consensus 84 ~~v~~lg~~-~l~~~l~~~g~ 103 (249)
T TIGR01457 84 KTVYVIGEE-GLKEAIKEAGY 103 (249)
T ss_pred CEEEEEcCh-hHHHHHHHcCC
Confidence 678888875 34556665543
No 166
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.59 E-value=4.4 Score=41.62 Aligned_cols=81 Identities=14% Similarity=0.265 Sum_probs=53.4
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce----EE-ec----CCHhhHHHHHHHHHhhc---CCeE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE----VY-CS----LKPEDKLNHVKRTSRDM---GGGL 661 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~----v~-a~----~~P~~K~~~V~~l~~~~---g~~V 661 (750)
++-|++.++++.|++ ++++.++|.-+.. .+..|+.. ++ +. ..|. .++.+...++. ...+
T Consensus 113 ~~~~gv~~~L~~L~~--~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~--p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 113 DVPQATHDTLKQLAK--KWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPF--SDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred CCCccHHHHHHHHHc--CCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCc--HHHHHHHHHHcCCChhHE
Confidence 466899999999986 3788889886554 26678753 33 21 1232 33333322221 3569
Q ss_pred EEEcCC-ccCHHHHHhCCccEEe
Q 004479 662 IMVGEG-INDAPALAAATVGIVL 683 (750)
Q Consensus 662 amvGDG-~NDapAL~~AdVGIam 683 (750)
.||||. ..|..+-++|++-...
T Consensus 184 ~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 184 LHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred EEEcCCcHHHHHHHHHCCCeEEE
Confidence 999999 5999998888876543
No 167
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=73.90 E-value=5.9 Score=41.79 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=37.8
Q ss_pred Cc-hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce
Q 004479 595 PR-PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE 636 (750)
Q Consensus 595 lr-~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~ 636 (750)
+| |++.+++++|++ .|+++.+.|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999 599999999988889999999999985
No 168
>PLN03017 trehalose-phosphatase
Probab=72.92 E-value=24 Score=38.72 Aligned_cols=62 Identities=19% Similarity=0.157 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhhcC------CeEEEEcCCccCHHHHHhC-----CccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHH
Q 004479 645 DKLNHVKRTSRDMG------GGLIMVGEGINDAPALAAA-----TVGIVLAQRASATAIAVADVLLLRNNISGVPFCV 711 (750)
Q Consensus 645 ~K~~~V~~l~~~~g------~~VamvGDG~NDapAL~~A-----dVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i 711 (750)
+|...++.+.+..| ..+.++||...|-.|++.. ++||.+|.... ...|++.| ++...+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeC--CCHHHHHHHH
Confidence 66666666665322 2589999999999998855 47788874211 24578877 5566665544
No 169
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=72.38 E-value=6.6 Score=41.47 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=36.6
Q ss_pred Cc-hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce
Q 004479 595 PR-PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE 636 (750)
Q Consensus 595 lr-~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~ 636 (750)
+| |++.+++++|++ .|+++.++|+-+...+..+.+++|+..
T Consensus 148 irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999 699999999877888899999999974
No 170
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=72.36 E-value=12 Score=39.39 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=56.5
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHH---HHHHcCCceEEecC-CHhhHHHHHHHHHhh--cCCe
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQR---VANAVGINEVYCSL-KPEDKLNHVKRTSRD--MGGG 660 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~---iA~~~GI~~v~a~~-~P~~K~~~V~~l~~~--~g~~ 660 (750)
|.+.-.+.+=|++.++|++|++ .|++++.+|+....+... --+++|+..-..+. +|..- ..+.|++. .+.+
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~--~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALC--AARLLRQPPDAPKA 87 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHH--HHHHHHhhCcCCCE
Confidence 4555567778899999999999 599999999965333322 23567885211111 11111 22333331 2578
Q ss_pred EEEEcCCccCHHHHHhCCccEE
Q 004479 661 LIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGIa 682 (750)
|.++|+. .....++.+++-+.
T Consensus 88 v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCH-HHHHHHHHCCCEEe
Confidence 9999985 35567776665543
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=71.11 E-value=9 Score=39.92 Aligned_cols=48 Identities=19% Similarity=0.396 Sum_probs=37.2
Q ss_pred EEEEecCC----CchhHHHHHHHHHhcCCcEEEEecCCCHHH---HHHHHHHcCCc
Q 004479 587 TLIHLEDR----PRPGVSDVIAELKDHARLRVMMLTGDHESS---AQRVANAVGIN 635 (750)
Q Consensus 587 G~i~~~D~----lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t---A~~iA~~~GI~ 635 (750)
|.+.-.+. +=|++.++|++||+ .|++++++||.+..+ ....-+++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55556666 78899999999999 599999999976665 44444567875
No 172
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=70.28 E-value=15 Score=37.65 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=25.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI 634 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI 634 (750)
.+-+++.++++.|.+..+..|+++||-+.........--+|
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i 59 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNI 59 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCc
Confidence 45689999999999865556999999999886665444344
No 173
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=67.31 E-value=9 Score=40.21 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=38.9
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
.+.+.+++.++|+.|++ .|+++++.||-....+..+.+++|+.
T Consensus 19 ~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 19 HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 34577889999999999 59999999999999999999999985
No 174
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=66.75 E-value=5.2 Score=38.62 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=50.1
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEE-----ecC----CHhhH--HHHHHHHHhhcCCeEE
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVY-----CSL----KPEDK--LNHVKRTSRDMGGGLI 662 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~-----a~~----~P~~K--~~~V~~l~~~~g~~Va 662 (750)
++.|++.++++. +.++|.-+.......-+..|+...| ++. .|+-. ....+.+.-. ...+.
T Consensus 90 ~~~~g~~~~L~~--------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p~~~l 160 (175)
T TIGR01493 90 PPWPDSAAALAR--------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-PDRVL 160 (175)
T ss_pred CCCCchHHHHHH--------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-HHHeE
Confidence 578899988872 5688998888888889999986422 221 33322 2333333222 35699
Q ss_pred EEcCCccCHHHHHhC
Q 004479 663 MVGEGINDAPALAAA 677 (750)
Q Consensus 663 mvGDG~NDapAL~~A 677 (750)
||||...|..+-+++
T Consensus 161 ~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 161 MVAAHQWDLIGARKF 175 (175)
T ss_pred eEecChhhHHHHhcC
Confidence 999999998876543
No 175
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=65.43 E-value=15 Score=35.96 Aligned_cols=85 Identities=22% Similarity=0.379 Sum_probs=54.3
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecC---CC--HHHH----------HHHHHHcC--Cce-EEecCCHhh-------HHHH
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTG---DH--ESSA----------QRVANAVG--INE-VYCSLKPED-------KLNH 649 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTG---D~--~~tA----------~~iA~~~G--I~~-v~a~~~P~~-------K~~~ 649 (750)
+.|++.+++..|++ +|.+++|+|- .. ..+. ..+=++.| |+. .+|.-.|++ |-.+
T Consensus 32 ~~~g~i~al~~l~~-~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm 110 (181)
T COG0241 32 FIPGVIPALLKLQR-AGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGM 110 (181)
T ss_pred cCccHHHHHHHHHh-CCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHH
Confidence 56899999999998 7999999985 11 1111 11112233 222 456666665 3333
Q ss_pred HHHHHhhcC---CeEEEEcCCccCHHHHHhCCcc
Q 004479 650 VKRTSRDMG---GGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 650 V~~l~~~~g---~~VamvGDG~NDapAL~~AdVG 680 (750)
++...++.+ ..--||||-..|..+-..++++
T Consensus 111 ~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 111 LLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 333333323 5788999999999998888877
No 176
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=64.71 E-value=46 Score=31.87 Aligned_cols=88 Identities=18% Similarity=0.182 Sum_probs=61.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHH---HHHHc-----CCc-----------------eEEecCCHhhH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQR---VANAV-----GIN-----------------EVYCSLKPEDK 646 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~---iA~~~-----GI~-----------------~v~a~~~P~~K 646 (750)
+|..++++.+..+.+++ .|++++-||+-..--|.. --++. ++. ++..+-.-+.|
T Consensus 25 ~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK 103 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFK 103 (157)
T ss_pred chhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHH
Confidence 47999999999999999 599999999976443332 22222 332 23334345679
Q ss_pred HHHHHHHHhh----cCCeEEEEcCCccCHHHHHhCCcc
Q 004479 647 LNHVKRTSRD----MGGGLIMVGEGINDAPALAAATVG 680 (750)
Q Consensus 647 ~~~V~~l~~~----~g~~VamvGDG~NDapAL~~AdVG 680 (750)
...++.+++. ....++-.|.-.+|+.|-+++.|-
T Consensus 104 ~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 104 IACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 9999998864 234566677778898888876653
No 177
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.52 E-value=42 Score=35.45 Aligned_cols=63 Identities=17% Similarity=0.314 Sum_probs=38.0
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcC-CccCHH---HHHhCCccEEe-CCCCcHH--HHhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGE-GINDAP---ALAAATVGIVL-AQRASAT--AIAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGD-G~NDap---AL~~AdVGIam-g~~~s~~--A~~aADivL~ 700 (750)
|.-+||..=.++++...-. .|+.|+++|- |+-=.| .|.+++.-+.+ .+...+. ....||+++.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 5667777766666655321 3899999999 666666 34444444333 2223322 3467999885
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=60.53 E-value=10 Score=39.44 Aligned_cols=109 Identities=11% Similarity=0.130 Sum_probs=60.6
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHHHHH-------------HHHHcCCceEEecCCHhhH--HHHHHHHHhhcCCe
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESSAQR-------------VANAVGINEVYCSLKPEDK--LNHVKRTSRDMGGG 660 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~-------------iA~~~GI~~v~a~~~P~~K--~~~V~~l~~~~g~~ 660 (750)
-++..++++.|++ .+....+.|+........ +....|...++. -.|+.. ....+.+... ...
T Consensus 122 y~~l~~a~~~L~~-~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~-gKP~p~~~~~~~~~~~~~-~~~ 198 (257)
T TIGR01458 122 YQILNQAFRLLLD-GAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVV-GKPSKTFFLEALRATGCE-PEE 198 (257)
T ss_pred HHHHHHHHHHHHc-CCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceee-cCCCHHHHHHHHHHhCCC-hhh
Confidence 3688899999998 588888888765443322 222223222211 134322 2233333222 367
Q ss_pred EEEEcCCc-cCHHHHHhCCccE-EeCCCC-cHH----HHhhcCEEEecCCCCCHHH
Q 004479 661 LIMVGEGI-NDAPALAAATVGI-VLAQRA-SAT----AIAVADVLLLRNNISGVPF 709 (750)
Q Consensus 661 VamvGDG~-NDapAL~~AdVGI-amg~~~-s~~----A~~aADivL~~~~l~~l~~ 709 (750)
+.||||.. +|..+-+.+.+-- .+..+. +.. ....+|.++ +++..+..
T Consensus 199 ~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~ 252 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVD 252 (257)
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHH
Confidence 99999996 8999888887643 333211 111 122367776 55555544
No 179
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=60.00 E-value=15 Score=36.98 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=36.0
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCc
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
.-+.++++|+.|++ .|+++++.||-....+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 33458999999999 69999999999999999999999975
No 180
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=59.26 E-value=26 Score=40.47 Aligned_cols=80 Identities=10% Similarity=0.254 Sum_probs=52.8
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCH------------HHHHHHHHHcCCc-eEEecCCH----hhHHHHHHHHHhhc
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHE------------SSAQRVANAVGIN-EVYCSLKP----EDKLNHVKRTSRDM 657 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~------------~tA~~iA~~~GI~-~v~a~~~P----~~K~~~V~~l~~~~ 657 (750)
+-|++.+.++.|++ .|++++++|.=.. ..+..+.+++|+. .++..... .-+-..+..+.++.
T Consensus 198 l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~~~~~RKP~pGm~~~a~~~~ 276 (526)
T TIGR01663 198 IFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIGAGFYRKPLTGMWDHLKEEA 276 (526)
T ss_pred cccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCCCCCCCCCCHHHHHHHHHhc
Confidence 46999999999999 6999999997443 4577888999884 23321111 11123344433322
Q ss_pred C-------CeEEEEcCCccCHHHHH
Q 004479 658 G-------GGLIMVGEGINDAPALA 675 (750)
Q Consensus 658 g-------~~VamvGDG~NDapAL~ 675 (750)
+ ....||||-..|..+-+
T Consensus 277 ~~~~~Id~~~S~~VGDaagr~~~g~ 301 (526)
T TIGR01663 277 NDGTEIQEDDCFFVGDAAGRPANGK 301 (526)
T ss_pred CcccCCCHHHeEEeCCcccchHHHH
Confidence 2 35889999999976643
No 181
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=58.93 E-value=28 Score=35.28 Aligned_cols=89 Identities=21% Similarity=0.314 Sum_probs=67.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-----C------CHhhHHHHHHHHHhhcCCe
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-----L------KPEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-----~------~P~~K~~~V~~l~~~~g~~ 660 (750)
..++.|++.+.+++|+++ |+.+.+.|+-....+..+.+.+|+.+.|.- - .|+-=+.-.++|.-. -..
T Consensus 84 ~~~~~pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~-P~~ 161 (221)
T COG0637 84 GLKPIPGVVELLEQLKAR-GIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD-PEE 161 (221)
T ss_pred CCCCCccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC-hHH
Confidence 357899999999999994 899999999999999999999999764432 1 222223334443223 467
Q ss_pred EEEEcCCccCHHHHHhCCccEE
Q 004479 661 LIMVGEGINDAPALAAATVGIV 682 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGIa 682 (750)
+..+.|..|...|-++|..-+-
T Consensus 162 CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 162 CVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred eEEEecchhHHHHHHHCCCEEE
Confidence 8999999999999999986543
No 182
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=58.43 E-value=13 Score=45.71 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhh---cC---CeEEEEcCCccCHHHHHhCC--------------ccEEeCCCCcHHHHhhcCEEEecCCC
Q 004479 645 DKLNHVKRTSRD---MG---GGLIMVGEGINDAPALAAAT--------------VGIVLAQRASATAIAVADVLLLRNNI 704 (750)
Q Consensus 645 ~K~~~V~~l~~~---~g---~~VamvGDG~NDapAL~~Ad--------------VGIamg~~~s~~A~~aADivL~~~~l 704 (750)
+|...++.+.+. .| ..|+++||+.||-+|++.++ ++|.+|.+.| .|.+-| ++.
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S-----~A~y~L--~d~ 834 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPS-----KAKYYL--DDT 834 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCc-----cCeEec--CCH
Confidence 698888887531 13 36899999999999999875 6677876433 355655 444
Q ss_pred CCHHHHH
Q 004479 705 SGVPFCV 711 (750)
Q Consensus 705 ~~l~~~i 711 (750)
..+..++
T Consensus 835 ~eV~~lL 841 (854)
T PLN02205 835 AEIVRLM 841 (854)
T ss_pred HHHHHHH
Confidence 5555444
No 183
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=57.84 E-value=21 Score=34.60 Aligned_cols=79 Identities=19% Similarity=0.411 Sum_probs=54.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEec-CCCHHHHHHHHHHcCCc----------eEE--ecCCHhhHHHHHHHHHhhcC---
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLT-GDHESSAQRVANAVGIN----------EVY--CSLKPEDKLNHVKRTSRDMG--- 658 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlT-GD~~~tA~~iA~~~GI~----------~v~--a~~~P~~K~~~V~~l~~~~g--- 658 (750)
+-|+++++++.|++ .|+++.+.| =|.++.|+.+=+.++|. ++| -+.-|..|....+.++++.|
T Consensus 46 lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y 124 (169)
T PF12689_consen 46 LYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPY 124 (169)
T ss_dssp --TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---G
T ss_pred eCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCCh
Confidence 55899999999999 699999999 58999999999999998 443 46678899999999987522
Q ss_pred CeEEEEcCCccCHHHH
Q 004479 659 GGLIMVGEGINDAPAL 674 (750)
Q Consensus 659 ~~VamvGDG~NDapAL 674 (750)
..+++.=|-..-....
T Consensus 125 ~eMlFFDDe~~N~~~v 140 (169)
T PF12689_consen 125 EEMLFFDDESRNIEVV 140 (169)
T ss_dssp GGEEEEES-HHHHHHH
T ss_pred hHEEEecCchhcceee
Confidence 3466766654433333
No 184
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=56.34 E-value=1.2e+02 Score=31.90 Aligned_cols=110 Identities=19% Similarity=0.241 Sum_probs=71.9
Q ss_pred EEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhH----HHHHHHHHhh-cCCe
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDK----LNHVKRTSRD-MGGG 660 (750)
Q Consensus 586 lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K----~~~V~~l~~~-~g~~ 660 (750)
=|.+.-.+++=|++.++|+.|++ .|++++.+|--...+...+++++.=. ..-+.+|++= ......++++ .+.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~~-~~~~~~~~~i~TS~~at~~~l~~~~~~~k 93 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSSL-GGVDVTPDDIVTSGDATADYLAKQKPGKK 93 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHhh-cCCCCCHHHeecHHHHHHHHHHhhCCCCE
Confidence 37888889999999999999999 69999999998888887666553210 0111222221 1112233332 2479
Q ss_pred EEEEcCCccCHHHHHhCCccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 661 LIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 661 VamvGDG~NDapAL~~AdVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
|-++|.+ .+-..|+.+++-+.-... + ...|++++..|
T Consensus 94 v~viG~~-~l~~~l~~~G~~~~~~~~--~---~~~d~Vv~g~d 130 (269)
T COG0647 94 VYVIGEE-GLKEELEGAGFELVDEEE--P---ARVDAVVVGLD 130 (269)
T ss_pred EEEECCc-chHHHHHhCCcEEeccCC--C---CcccEEEEecC
Confidence 9999965 677889998887765431 1 11677776544
No 185
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=56.09 E-value=1.1e+02 Score=31.87 Aligned_cols=94 Identities=15% Similarity=0.247 Sum_probs=58.1
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEE-EecCCC-HHHHHHHHHHcC-CceEEe-----cC---CHhhHHHHHHHHHhhc
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVM-MLTGDH-ESSAQRVANAVG-INEVYC-----SL---KPEDKLNHVKRTSRDM 657 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~-mlTGD~-~~tA~~iA~~~G-I~~v~a-----~~---~P~~K~~~V~~l~~~~ 657 (750)
+.+-|.+-++..+.++.+|+ .|++.+ +++-.. .+....+++... ..-+.+ .. .+.+=.+.++.+++..
T Consensus 119 viipDlp~ee~~~~~~~~~~-~gl~~i~lv~P~T~~eri~~i~~~~~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~~ 197 (256)
T TIGR00262 119 VLVADLPLEESGDLVEAAKK-HGVKPIFLVAPNADDERLKQIAEKSQGFVYLVSRAGVTGARNRAASALNELVKRLKAYS 197 (256)
T ss_pred EEECCCChHHHHHHHHHHHH-CCCcEEEEECCCCCHHHHHHHHHhCCCCEEEEECCCCCCCcccCChhHHHHHHHHHhhc
Confidence 33456677899999999999 598854 666655 456667777764 543322 11 2233456666776652
Q ss_pred CCeEEEEcCCcc---CHHHHHh--CCccEEeCC
Q 004479 658 GGGLIMVGEGIN---DAPALAA--ATVGIVLAQ 685 (750)
Q Consensus 658 g~~VamvGDG~N---DapAL~~--AdVGIamg~ 685 (750)
+. -.++|=|+| |+..+.+ || |+-+|+
T Consensus 198 ~~-pi~vgfGI~~~e~~~~~~~~GAD-gvVvGS 228 (256)
T TIGR00262 198 AK-PVLVGFGISKPEQVKQAIDAGAD-GVIVGS 228 (256)
T ss_pred CC-CEEEeCCCCCHHHHHHHHHcCCC-EEEECH
Confidence 33 356799998 5555443 56 566653
No 186
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.01 E-value=62 Score=34.52 Aligned_cols=63 Identities=21% Similarity=0.353 Sum_probs=35.6
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCC-ccCHH---HHHhCCccEEeC-CCCcH--HHHhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEG-INDAP---ALAAATVGIVLA-QRASA--TAIAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG-~NDap---AL~~AdVGIamg-~~~s~--~A~~aADivL~ 700 (750)
|.-+||..=.++++...-. .|+.|+++|-| +==.| .|.+++.-+.+- ....+ .+...||+++.
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 4566777766666655421 38999999997 44444 344455444432 11111 22356788775
No 187
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=55.31 E-value=24 Score=34.20 Aligned_cols=83 Identities=20% Similarity=0.269 Sum_probs=59.1
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCH----HHHHHHHHHcCCce----EEecCCH----hhHHHHHHHHHhhcCCeEE
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHE----SSAQRVANAVGINE----VYCSLKP----EDKLNHVKRTSRDMGGGLI 662 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~----~tA~~iA~~~GI~~----v~a~~~P----~~K~~~V~~l~~~~g~~Va 662 (750)
+++-+++.|+.=++ -|-+++.+||-.+ .++..+|+...|.+ +|+.-.| -+|.. .+|++ ..-.
T Consensus 115 PKevA~qLI~MHq~-RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~---~i~~~--~~~I 188 (237)
T COG3700 115 PKEVARQLIDMHQR-RGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQ---WIQDK--NIRI 188 (237)
T ss_pred hHHHHHHHHHHHHh-cCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCCcccccccH---HHHhc--CceE
Confidence 56677788877666 5889999999764 46677788888864 5666655 23444 44544 4456
Q ss_pred EEcCCccCHHHHHhCCc-cEEe
Q 004479 663 MVGEGINDAPALAAATV-GIVL 683 (750)
Q Consensus 663 mvGDG~NDapAL~~AdV-GIam 683 (750)
.-||.-||..|-++|.+ ||-+
T Consensus 189 hYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 189 HYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred EecCCchhhhHHHhcCccceeE
Confidence 78999999999998875 4543
No 188
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=55.05 E-value=23 Score=35.23 Aligned_cols=49 Identities=22% Similarity=0.513 Sum_probs=41.4
Q ss_pred EEEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH---HcCCc
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN---AVGIN 635 (750)
Q Consensus 586 lG~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~---~~GI~ 635 (750)
-|.+.++|..-|++.++++.||. .+.+|.-+|--.+++-+.+.+ +||++
T Consensus 15 SGtLh~e~~avpga~eAl~rLr~-~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 15 SGTLHIEDAAVPGAVEALKRLRD-QHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cceEecccccCCCHHHHHHHHHh-cCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 48999999999999999999998 599999998877777666665 46764
No 189
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=53.92 E-value=48 Score=36.08 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=34.2
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHc-C
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAV-G 633 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~-G 633 (750)
-|++.+.++.|++ .|+++.++|.-....+..+-+.+ |
T Consensus 186 ~pgl~elL~~Lr~-~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKE-HGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4699999999999 69999999999999999999996 7
No 190
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=52.94 E-value=72 Score=33.44 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=51.3
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHH----HHHHHHHHcCCc---eEEecCCH--------hhHHHHHHHHHhh
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHES----SAQRVANAVGIN---EVYCSLKP--------EDKLNHVKRTSRD 656 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~----tA~~iA~~~GI~---~v~a~~~P--------~~K~~~V~~l~~~ 656 (750)
+.|.=|++.+..+.+++ .|++|+.+||-.+. |..++ ++.|.. +++-|-.. +-|...=+++.++
T Consensus 143 ~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 35666899999999999 59999999997753 44444 346874 34444221 2244444444455
Q ss_pred cCCeEEEEcCCccCH
Q 004479 657 MGGGLIMVGEGINDA 671 (750)
Q Consensus 657 ~g~~VamvGDG~NDa 671 (750)
.-++++.+||--+|-
T Consensus 221 GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 221 GYNIVGIIGDQWNDL 235 (275)
T ss_pred CceEEEEECCCHHhc
Confidence 235688899998886
No 191
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=52.75 E-value=55 Score=35.30 Aligned_cols=83 Identities=18% Similarity=0.328 Sum_probs=54.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcC----CcEEEEecCCC---HH-HHHHHHHHcCCceEEecCCHhh----HHHHHHHHH
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHA----RLRVMMLTGDH---ES-SAQRVANAVGINEVYCSLKPED----KLNHVKRTS 654 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~a----gi~v~mlTGD~---~~-tA~~iA~~~GI~~v~a~~~P~~----K~~~V~~l~ 654 (750)
|++.-.+++-|++.++++.|++ . |+++..+|-.. .. .+..+.+++|+. ..|++ .... ..+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~-----~~~~~i~~s~~~~-~~ll 81 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD-----VSPLQVIQSHSPY-KSLV 81 (321)
T ss_pred CceECCccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC-----CCHHHHHhhhHHH-HHHH
Confidence 6777788999999999999997 6 89999998544 33 467777888984 23333 1222 2333
Q ss_pred hhcCCeEEEEcCCccCHHHHHhC
Q 004479 655 RDMGGGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 655 ~~~g~~VamvGDG~NDapAL~~A 677 (750)
++.+.+|.++|.+. -...++.+
T Consensus 82 ~~~~~~v~viG~~~-~~~~l~~~ 103 (321)
T TIGR01456 82 NKYEKRILAVGTGS-VRGVAEGY 103 (321)
T ss_pred HHcCCceEEEeChH-HHHHHHHc
Confidence 32245788898763 34444433
No 192
>PLN02423 phosphomannomutase
Probab=49.90 E-value=21 Score=36.95 Aligned_cols=45 Identities=22% Similarity=0.330 Sum_probs=36.9
Q ss_pred ecCCHh--hHHHHHHHHHhhcCCeEEEEcC----CccCHHHHHh-CCccEEeCC
Q 004479 639 CSLKPE--DKLNHVKRTSRDMGGGLIMVGE----GINDAPALAA-ATVGIVLAQ 685 (750)
Q Consensus 639 a~~~P~--~K~~~V~~l~~~~g~~VamvGD----G~NDapAL~~-AdVGIamg~ 685 (750)
-+..|. +|..-++.|+ . ..-|++.|| |-||.+||+. --.||.+.+
T Consensus 181 iDi~~~gvnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 344544 6999999999 4 578899999 8999999996 778898875
No 193
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=49.53 E-value=44 Score=35.45 Aligned_cols=83 Identities=25% Similarity=0.444 Sum_probs=60.3
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-HcCCc-----------------------eEEecCCHh
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN-AVGIN-----------------------EVYCSLKPE 644 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~-~~GI~-----------------------~v~a~~~P~ 644 (750)
+.+-|.+|.+ +.|+++|+ +|.+|.++|--....|.+.+. ..|++ ++.+|+-|+
T Consensus 161 V~vLdRpRH~--~lI~eiR~-~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~mqgRL~~~ 237 (319)
T PRK09479 161 VVVLDRPRHE--ELIAEIRE-AGARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLAAAALKCLGGEMQGRLLPR 237 (319)
T ss_pred EEEEcCchHH--HHHHHHHH-cCCeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHHHHHHHhcCceeEEeECCC
Confidence 3456777775 89999999 799999998666666666662 34554 488999887
Q ss_pred hHHHHHHHHHhh---------------cCCeEEEEcCCccCHHHHH
Q 004479 645 DKLNHVKRTSRD---------------MGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 645 ~K~~~V~~l~~~---------------~g~~VamvGDG~NDapAL~ 675 (750)
+..+.-++.+ . .|.-|.|+.-|+-|...|+
T Consensus 238 ~~~e~~r~~~-~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 238 NEEERARAKK-MGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred CHHHHHHHHH-cCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 7665544332 2 1347999999999998886
No 194
>PHA02669 hypothetical protein; Provisional
Probab=47.95 E-value=39 Score=31.93 Aligned_cols=48 Identities=17% Similarity=0.317 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhh
Q 004479 168 IHVLMAFAAFASIFMGNSLEGGLLLAMFNLAHIAEEFFT-SRAMVDVKELKE 218 (750)
Q Consensus 168 ~~~L~~la~~~a~~~g~~~~~~~i~~~~~l~~~~e~~~~-~ra~~~l~~L~~ 218 (750)
|..|+.++++.+.+ |+++++|.+++-++-+.|...+ .|..+.+++|..
T Consensus 1 m~~LVii~iIvavi---~LTgAaiYlLiEiGLAaERanKrsRvK~nMRkLat 49 (210)
T PHA02669 1 MMALVLIGIIVAVI---YLTGAAIYLLIEIGLAAERANKRSRVKANMRKLAT 49 (210)
T ss_pred CceeehhHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34566667666654 5677888888888877765443 355566676654
No 195
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=47.74 E-value=69 Score=34.00 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC---CHhhHHHHHHHHHhh----cCCeEEEEcCCcc
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL---KPEDKLNHVKRTSRD----MGGGLIMVGEGIN 669 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~---~P~~K~~~V~~l~~~----~g~~VamvGDG~N 669 (750)
+..+++-+-|-++ +..+|.=|...++....|+..++.-+=+-. -|-|=+.=+..+++. .|.++++||||.|
T Consensus 87 Esi~DTArVLsr~--~D~I~~R~~~~~~ve~lA~~s~VPViNgLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNN 164 (310)
T COG0078 87 ESIKDTARVLSRM--VDAIMIRGFSHETLEELAKYSGVPVINGLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNN 164 (310)
T ss_pred CcHHHHHHHHHhh--hheEEEecccHHHHHHHHHhCCCceEcccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcch
Confidence 3444555555553 678899999999999999999997332221 344433322233322 3689999999966
Q ss_pred CHHHH
Q 004479 670 DAPAL 674 (750)
Q Consensus 670 DapAL 674 (750)
=+..|
T Consensus 165 v~nSl 169 (310)
T COG0078 165 VANSL 169 (310)
T ss_pred HHHHH
Confidence 55544
No 196
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=44.60 E-value=1.6e+02 Score=28.60 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcCCcEE-EEecCCCHHHHHHHHHHcCCceEE-ecCCHhhHHHHHHHHHhhcCCeEEEEcCCc--cCHHHH
Q 004479 599 VSDVIAELKDHARLRV-MMLTGDHESSAQRVANAVGINEVY-CSLKPEDKLNHVKRTSRDMGGGLIMVGEGI--NDAPAL 674 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v-~mlTGD~~~tA~~iA~~~GI~~v~-a~~~P~~K~~~V~~l~~~~g~~VamvGDG~--NDapAL 674 (750)
..++++.+|+...-+. +.+=.|+.+-+.... +.|.+-|. -+++|++=.+.++.++...++....+.-|+ +..+.+
T Consensus 66 i~~av~~~~~~~~~~~~I~VEv~~~ee~~ea~-~~g~d~I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~y 144 (169)
T PF01729_consen 66 IEEAVKAARQAAPEKKKIEVEVENLEEAEEAL-EAGADIIMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEY 144 (169)
T ss_dssp HHHHHHHHHHHSTTTSEEEEEESSHHHHHHHH-HTT-SEEEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEcCCHHHHHHHH-HhCCCEEEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHH
Confidence 6677777777544333 777788887777644 47887664 578999999999988875455666666665 467777
Q ss_pred HhCCc-cEEeCC
Q 004479 675 AAATV-GIVLAQ 685 (750)
Q Consensus 675 ~~AdV-GIamg~ 685 (750)
++.+| .|++|.
T Consensus 145 a~~gvD~isvg~ 156 (169)
T PF01729_consen 145 AKTGVDVISVGS 156 (169)
T ss_dssp HHTT-SEEEECH
T ss_pred HhcCCCEEEcCh
Confidence 77775 567763
No 197
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=43.24 E-value=13 Score=36.29 Aligned_cols=13 Identities=46% Similarity=0.687 Sum_probs=12.3
Q ss_pred EEEcCCCCCcCCc
Q 004479 433 IAFDKTGTLTTGG 445 (750)
Q Consensus 433 i~fDKTGTLT~g~ 445 (750)
+|||++||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999998
No 198
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=42.93 E-value=1.9e+02 Score=29.75 Aligned_cols=89 Identities=22% Similarity=0.336 Sum_probs=55.4
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEE-ecCC-CHHHHHHHHH-HcCCceEEe------cCC--HhhHHHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMM-LTGD-HESSAQRVAN-AVGINEVYC------SLK--PEDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~m-lTGD-~~~tA~~iA~-~~GI~~v~a------~~~--P~~K~~~V~~l~~~~g~~V 661 (750)
|-+=++..+.++.+|+ .|++..+ ++-. ..+..+.+++ ..|..-+.+ ..+ +.+-.+.|+.+++. ...-
T Consensus 112 Dl~~ee~~~~~~~~~~-~g~~~i~~i~P~T~~~~i~~i~~~~~~~vy~~s~~g~tG~~~~~~~~~~~~i~~lr~~-~~~p 189 (242)
T cd04724 112 DLPPEEAEEFREAAKE-YGLDLIFLVAPTTPDERIKKIAELASGFIYYVSRTGVTGARTELPDDLKELIKRIRKY-TDLP 189 (242)
T ss_pred CCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHhhCCCCEEEEeCCCCCCCccCCChhHHHHHHHHHhc-CCCc
Confidence 4344688899999999 6997666 4443 3455677777 677654332 222 23445666777765 4556
Q ss_pred EEEcCCccC---HHHHHh-CCccEEeC
Q 004479 662 IMVGEGIND---APALAA-ATVGIVLA 684 (750)
Q Consensus 662 amvGDG~ND---apAL~~-AdVGIamg 684 (750)
.++|=|+|+ +..+.. || |+.+|
T Consensus 190 I~vggGI~~~e~~~~~~~~AD-gvVvG 215 (242)
T cd04724 190 IAVGFGISTPEQAAEVAKYAD-GVIVG 215 (242)
T ss_pred EEEEccCCCHHHHHHHHccCC-EEEEC
Confidence 778999994 445544 44 56665
No 199
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=42.60 E-value=93 Score=31.78 Aligned_cols=86 Identities=17% Similarity=0.369 Sum_probs=51.9
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEec---CCCHHHH-HHHHHHcCCceEEecCCHhhH----HHHHHHHHhh-c
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLT---GDHESSA-QRVANAVGINEVYCSLKPEDK----LNHVKRTSRD-M 657 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlT---GD~~~tA-~~iA~~~GI~~v~a~~~P~~K----~~~V~~l~~~-~ 657 (750)
|++.-.+.+=|++.++|+.|++ .|++++++| |-..... ..+.+..|+. ++|++= ....+.++++ .
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-----~~~~~iits~~~~~~~l~~~~~ 80 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSSLLGVD-----VSPDQIITSGSVTKDLLRQRFE 80 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHHhcCCC-----CCHHHeeeHHHHHHHHHHHhCC
Confidence 3444456666799999999999 599999998 5444443 3444436763 333331 1122333322 2
Q ss_pred CCeEEEEcCCccCHHHHHhCCc
Q 004479 658 GGGLIMVGEGINDAPALAAATV 679 (750)
Q Consensus 658 g~~VamvGDG~NDapAL~~AdV 679 (750)
+++|.++|.. .....++.+++
T Consensus 81 ~~~v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 81 GEKVYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred CCEEEEECCH-HHHHHHHHcCC
Confidence 5679999964 45566665543
No 200
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=41.85 E-value=1.1e+02 Score=29.06 Aligned_cols=73 Identities=18% Similarity=0.310 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec--CCHhhHH---HHHHHHHhhcCCeE-EEEcCCccCHHH
Q 004479 600 SDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS--LKPEDKL---NHVKRTSRDMGGGL-IMVGEGINDAPA 673 (750)
Q Consensus 600 ~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~--~~P~~K~---~~V~~l~~~~g~~V-amvGDG~NDapA 673 (750)
.+.=++|++ .|+..+++.||..+.-..+++++|+..||+. ..|+++. ++.+.+++. |-.+ .+-++..-+...
T Consensus 56 ~~L~~~L~~-~g~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~-~i~~~~~~~~~L~~~~~ 133 (165)
T PF00875_consen 56 ADLQESLRK-LGIPLLVLRGDPEEVLPELAKEYGATAVYFNEEYTPYERRRDERVRKALKKH-GIKVHTFDDHTLVPPDD 133 (165)
T ss_dssp HHHHHHHHH-TTS-EEEEESSHHHHHHHHHHHHTESEEEEE---SHHHHHHHHHHHHHHHHT-TSEEEEE--SSSS-HHH
T ss_pred HHHHHHHHh-cCcceEEEecchHHHHHHHHHhcCcCeeEeccccCHHHHHHHHHHHHHHHhc-ceEEEEECCcEEEeccc
Confidence 344456677 4999999999999999999999999999985 4555543 233344443 4443 334444444443
Q ss_pred H
Q 004479 674 L 674 (750)
Q Consensus 674 L 674 (750)
+
T Consensus 134 i 134 (165)
T PF00875_consen 134 I 134 (165)
T ss_dssp C
T ss_pred c
Confidence 3
No 201
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=41.81 E-value=14 Score=31.21 Aligned_cols=22 Identities=32% Similarity=0.690 Sum_probs=16.4
Q ss_pred EecCCcCCCCEEEE-cCCCcccc
Q 004479 245 VPVHDVEVGSYILV-GAGEAVPV 266 (750)
Q Consensus 245 V~~~~l~~GDiI~v-~~Ge~VPa 266 (750)
+.-.+|.+||.|.| +.||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34578999999998 68999995
No 202
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=40.67 E-value=76 Score=33.57 Aligned_cols=84 Identities=23% Similarity=0.423 Sum_probs=58.6
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCc-----------------------eEEecCCHh
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGIN-----------------------EVYCSLKPE 644 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~-----------------------~v~a~~~P~ 644 (750)
+.+-|.+|.+ +.|+++|+ +|.+|.+++--....|.+.+.. .|++ ++.+|+-|+
T Consensus 158 V~vLdRpRH~--~lI~eiR~-~Gari~Li~DGDV~~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~~qgrL~~~ 234 (309)
T cd01516 158 VVVLDRPRHA--ALIEEIRE-AGARIKLIPDGDVAAAIATALPGSGVDVLMGIGGAPEGVLAAAALKCLGGEMQGRLLPR 234 (309)
T ss_pred EEEEcCchHH--HHHHHHHH-cCCeEEEeccccHHHHHHHhCCCCCeeEEEECCCChHHHHHHHHHHhCCceeEEEECCC
Confidence 3456777775 89999999 7999999986556666665533 5554 488888887
Q ss_pred hHHHHHHHHHhh--------------cCCeEEEEcCCccCHHHHH
Q 004479 645 DKLNHVKRTSRD--------------MGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 645 ~K~~~V~~l~~~--------------~g~~VamvGDG~NDapAL~ 675 (750)
+..+.-++.+.- .|..|.|+.-|+-|..-|+
T Consensus 235 ~~~e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 235 NEEERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred CHHHHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 655544333210 1467899999999988886
No 203
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.12 E-value=1.2e+02 Score=32.40 Aligned_cols=61 Identities=23% Similarity=0.252 Sum_probs=36.3
Q ss_pred ecCCHhhHHHHHHHHHhh-cCCeEEEEcCCccC-HH---HHH------hCCccEEeCCCCcHH--HHhhcCEEEe
Q 004479 639 CSLKPEDKLNHVKRTSRD-MGGGLIMVGEGIND-AP---ALA------AATVGIVLAQRASAT--AIAVADVLLL 700 (750)
Q Consensus 639 a~~~P~~K~~~V~~l~~~-~g~~VamvGDG~ND-ap---AL~------~AdVGIamg~~~s~~--A~~aADivL~ 700 (750)
.-+||..=.++++.+.-. .|+.|+++|.+..= -| +|. .|.|-+.... ..+. ....||+++.
T Consensus 139 ~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~-t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 139 VSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSA-TKDIPSYTRQADILIA 212 (295)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCC-chhHHHHHHhCCEEEE
Confidence 347777666666555321 38999999998322 11 332 3666666654 2332 3467999875
No 204
>PLN02151 trehalose-phosphatase
Probab=39.92 E-value=40 Score=36.81 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=47.1
Q ss_pred EecCCHh---hHHHHHHHHHhhcC------CeEEEEcCCccCHHHHHhC-----CccEEeCCCCcHHHHhhcCEEEecCC
Q 004479 638 YCSLKPE---DKLNHVKRTSRDMG------GGLIMVGEGINDAPALAAA-----TVGIVLAQRASATAIAVADVLLLRNN 703 (750)
Q Consensus 638 ~a~~~P~---~K~~~V~~l~~~~g------~~VamvGDG~NDapAL~~A-----dVGIamg~~~s~~A~~aADivL~~~~ 703 (750)
.-++.|. +|...|+.+.++.+ ..+.|+||-..|-.|++.. ++||-+|.... .-.|++.| ++
T Consensus 259 VvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L--~d 333 (354)
T PLN02151 259 VLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSL--QE 333 (354)
T ss_pred EEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeC--CC
Confidence 3455563 89999999886533 2489999999999998753 67777773111 12578887 55
Q ss_pred CCCHHHHH
Q 004479 704 ISGVPFCV 711 (750)
Q Consensus 704 l~~l~~~i 711 (750)
...+..++
T Consensus 334 p~eV~~~L 341 (354)
T PLN02151 334 PDEVMEFL 341 (354)
T ss_pred HHHHHHHH
Confidence 56665544
No 205
>PLN02591 tryptophan synthase
Probab=39.68 E-value=2.1e+02 Score=29.70 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=60.8
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEE-EecCCC-HHHHHHHHHHc-CCceEEec--------CCHhhHHHHHHHHHh
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVM-MLTGDH-ESSAQRVANAV-GINEVYCS--------LKPEDKLNHVKRTSR 655 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~-mlTGD~-~~tA~~iA~~~-GI~~v~a~--------~~P~~K~~~V~~l~~ 655 (750)
|++.- |-+=++..+..+.+++ .|+..+ ++|-.. ++..+.+++.. |.....++ -.|++=.+.++.+++
T Consensus 109 Gviip-DLP~ee~~~~~~~~~~-~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~ 186 (250)
T PLN02591 109 GLVVP-DLPLEETEALRAEAAK-NGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGARASVSGRVESLLQELKE 186 (250)
T ss_pred EEEeC-CCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCCcCCchhHHHHHHHHHh
Confidence 44433 4444889999999999 588654 555555 35677777776 55433332 236666677888887
Q ss_pred hcCCeEEEEcCCcc---CHHHHHhC-CccEEeC
Q 004479 656 DMGGGLIMVGEGIN---DAPALAAA-TVGIVLA 684 (750)
Q Consensus 656 ~~g~~VamvGDG~N---DapAL~~A-dVGIamg 684 (750)
. ...-.++|-|++ |+..+.+. -=|+-+|
T Consensus 187 ~-~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 187 V-TDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred c-CCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 6 456677899999 55555443 2255665
No 206
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=39.20 E-value=3.1e+02 Score=28.66 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=60.6
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcE-EEEecCCC-HHHHHHHHHHcC-CceEEec--------CCHhhHHHHHHHHHhhc
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLR-VMMLTGDH-ESSAQRVANAVG-INEVYCS--------LKPEDKLNHVKRTSRDM 657 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~-v~mlTGD~-~~tA~~iA~~~G-I~~v~a~--------~~P~~K~~~V~~l~~~~ 657 (750)
+.+-|-+=++..+.++.+++ .|+. +.+++=.. .+.-..+++... ..-+.++ ..|++=.++++.+++..
T Consensus 123 viipDLP~ee~~~~~~~~~~-~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t 201 (263)
T CHL00200 123 LIIPDLPYEESDYLISVCNL-YNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMT 201 (263)
T ss_pred EEecCCCHHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhc
Confidence 34567777899999999999 5886 55666554 567778888875 4332222 23455567788888763
Q ss_pred CCeEEEEcCCccCH---HHHHhCCc-cEEeCC
Q 004479 658 GGGLIMVGEGINDA---PALAAATV-GIVLAQ 685 (750)
Q Consensus 658 g~~VamvGDG~NDa---pAL~~AdV-GIamg~ 685 (750)
..-.++|=|+|+. ..+..+.. |+-+|+
T Consensus 202 -~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGS 232 (263)
T CHL00200 202 -NKPIILGFGISTSEQIKQIKGWNINGIVIGS 232 (263)
T ss_pred -CCCEEEECCcCCHHHHHHHHhcCCCEEEECH
Confidence 4445579999954 44444322 566653
No 207
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=39.03 E-value=3e+02 Score=25.00 Aligned_cols=87 Identities=8% Similarity=0.061 Sum_probs=53.8
Q ss_pred EecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCcc
Q 004479 590 HLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGIN 669 (750)
Q Consensus 590 ~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~N 669 (750)
.+-+++.++..+.+ ++ |+.+.....-..+...... -+.+-+++...+.=-.++++.+.+- +-|...|-|.|
T Consensus 2 li~~~~~~~~~~~l---~~--~~~v~~~~~~~~~~~~~~l--~~~d~ii~~~~~~~~~~~l~~~~~L--k~I~~~~~G~d 72 (133)
T PF00389_consen 2 LITDPLPDEEIERL---EE--GFEVEFCDSPSEEELAERL--KDADAIIVGSGTPLTAEVLEAAPNL--KLISTAGAGVD 72 (133)
T ss_dssp EESSS-SHHHHHHH---HH--TSEEEEESSSSHHHHHHHH--TTESEEEESTTSTBSHHHHHHHTT---SEEEESSSSCT
T ss_pred EEeccCCHHHHHHH---HC--CceEEEeCCCCHHHHHHHh--CCCeEEEEcCCCCcCHHHHhcccee--EEEEEcccccC
Confidence 45567766666655 44 5688887744444333333 3345566766663335566777543 78999999998
Q ss_pred --CHHHHHhCCccEEeCC
Q 004479 670 --DAPALAAATVGIVLAQ 685 (750)
Q Consensus 670 --DapAL~~AdVGIamg~ 685 (750)
|..++++-+|-++=..
T Consensus 73 ~id~~~a~~~gI~V~n~~ 90 (133)
T PF00389_consen 73 NIDLEAAKERGIPVTNVP 90 (133)
T ss_dssp TB-HHHHHHTTSEEEE-T
T ss_pred cccHHHHhhCeEEEEEeC
Confidence 7888899888888654
No 208
>PF15584 Imm44: Immunity protein 44
Probab=38.45 E-value=16 Score=31.20 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.5
Q ss_pred CCCEEEEcCCCccccCcEE
Q 004479 252 VGSYILVGAGEAVPVDCEV 270 (750)
Q Consensus 252 ~GDiI~v~~Ge~VPaDg~v 270 (750)
+.+-.+|+.|++|||||+=
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4455678999999999986
No 209
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=37.47 E-value=89 Score=33.36 Aligned_cols=84 Identities=19% Similarity=0.334 Sum_probs=58.6
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCc-----------------------eEEecCCHh
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGIN-----------------------EVYCSLKPE 644 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~-----------------------~v~a~~~P~ 644 (750)
+.+-|.+|.+ +.|+++|+ +|.+|.+++--....|.+.|.. .|++ ++.+|+-|+
T Consensus 159 V~vLdRpRH~--~lI~eir~-~Gari~Li~DGDV~~ai~~~~~~~~vD~~~GiGGaPEGVlaAaAlkclGG~~q~rL~~~ 235 (322)
T PRK12415 159 VIVQERERHQ--DIIDRVRA-KGARVKLFGDGDVGASIATALPGTGIDLFVGIGGAPEGVISAAALKCLGGEMQARLVPM 235 (322)
T ss_pred EEEEcCchHH--HHHHHHHH-cCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHHHHHHHhCCceeEEEECCC
Confidence 3455777765 89999999 7999999986555555555532 5554 488888877
Q ss_pred hHHHHHHHHHhh--------------cCCeEEEEcCCccCHHHHH
Q 004479 645 DKLNHVKRTSRD--------------MGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 645 ~K~~~V~~l~~~--------------~g~~VamvGDG~NDapAL~ 675 (750)
+..+.-+..+.- .|.-|.|+.-|+-|...|+
T Consensus 236 ~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~ 280 (322)
T PRK12415 236 NEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLD 280 (322)
T ss_pred CHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 655543333210 2568999999999998886
No 210
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=36.79 E-value=1.8e+02 Score=29.92 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=51.6
Q ss_pred hhHHHHHHHHHhcCCcEEEEecCC--CHHHHHHHHHHcCCceE------EecCCHhhHHHHHHHHHhhcCCeEEEEcCCc
Q 004479 597 PGVSDVIAELKDHARLRVMMLTGD--HESSAQRVANAVGINEV------YCSLKPEDKLNHVKRTSRDMGGGLIMVGEGI 668 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~mlTGD--~~~tA~~iA~~~GI~~v------~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~ 668 (750)
++..+.++.+++ .|+++.++-.. ..+..+.+++...-.-+ +....+.+-.+.++++++........+|=|+
T Consensus 116 ~~~~~~~~~~~~-~Gl~~~~~v~p~T~~e~l~~~~~~~~~~l~msv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~gGI 194 (244)
T PRK13125 116 DDLEKYVEIIKN-KGLKPVFFTSPKFPDLLIHRLSKLSPLFIYYGLRPATGVPLPVSVERNIKRVRNLVGNKYLVVGFGL 194 (244)
T ss_pred HHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHhCCCEEEEEeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEeCCc
Confidence 578889999999 69987666443 35666777776543222 2222344444555556553222346689999
Q ss_pred ---cCHHHHHhCCc-cEEeC
Q 004479 669 ---NDAPALAAATV-GIVLA 684 (750)
Q Consensus 669 ---NDapAL~~AdV-GIamg 684 (750)
+|+..+..+.+ |+-+|
T Consensus 195 ~~~e~i~~~~~~gaD~vvvG 214 (244)
T PRK13125 195 DSPEDARDALSAGADGVVVG 214 (244)
T ss_pred CCHHHHHHHHHcCCCEEEEC
Confidence 46666544433 45554
No 211
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=36.69 E-value=1.5e+02 Score=30.36 Aligned_cols=63 Identities=19% Similarity=0.274 Sum_probs=45.2
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHH----------HHHHHHHcCCceE-----EecCCHhhHHHHHHHHHhhcCCe
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESS----------AQRVANAVGINEV-----YCSLKPEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~t----------A~~iA~~~GI~~v-----~a~~~P~~K~~~V~~l~~~~g~~ 660 (750)
++-.++-|+.+|+ .|+. +-||+.... -..-|+++|++.| +-.+++++|+++|+..++. |-+
T Consensus 40 ~~~l~eki~la~~-~~V~--v~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~-g~~ 115 (237)
T TIGR03849 40 RDIVKEKIEMYKD-YGIK--VYPGGTLFEIAHSKGKFDEYLNECDELGFEAVEISDGSMEISLEERCNLIERAKDN-GFM 115 (237)
T ss_pred HHHHHHHHHHHHH-cCCe--EeCCccHHHHHHHhhhHHHHHHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhC-CCe
Confidence 3457788988888 6765 458973222 2236788898754 5678999999999999987 655
Q ss_pred EE
Q 004479 661 LI 662 (750)
Q Consensus 661 Va 662 (750)
|.
T Consensus 116 v~ 117 (237)
T TIGR03849 116 VL 117 (237)
T ss_pred Ee
Confidence 54
No 212
>PTZ00174 phosphomannomutase; Provisional
Probab=35.89 E-value=1.3e+02 Score=31.01 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=30.9
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN 630 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~ 630 (750)
++-|...++|++|++ .|+++++.||-.........+
T Consensus 22 ~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHh
Confidence 588999999999999 599999999998887665444
No 213
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.57 E-value=53 Score=31.39 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=38.3
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE 636 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~ 636 (750)
.=.+||++.+.+++|++ ++++.+.|.=.+..|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~--~yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASK--LYEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHh--hcEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 34589999999999996 49999999999999999999998763
No 214
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=33.02 E-value=52 Score=30.25 Aligned_cols=33 Identities=9% Similarity=0.153 Sum_probs=28.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHH
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQ 626 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~ 626 (750)
+++.+++.+++++|++ .|++++.+||-......
T Consensus 23 ~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6688999999999988 59999999998876644
No 215
>PRK04302 triosephosphate isomerase; Provisional
Probab=31.74 E-value=2.4e+02 Score=28.52 Aligned_cols=89 Identities=20% Similarity=0.262 Sum_probs=55.7
Q ss_pred CCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEec-------------CCHhhHHHHHHHHHhhcCCe
Q 004479 594 RPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCS-------------LKPEDKLNHVKRTSRDMGGG 660 (750)
Q Consensus 594 ~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~-------------~~P~~K~~~V~~l~~~~g~~ 660 (750)
.+-++..+.++.+++ .|+.+++.+|+..+ +..+ .+.|-+-++.+ .+|++=.++++.+++...+.
T Consensus 98 ~~~~e~~~~v~~a~~-~Gl~~I~~v~~~~~-~~~~-~~~~~~~I~~~p~~~igt~~~~~~~~~~~i~~~~~~ir~~~~~~ 174 (223)
T PRK04302 98 LTLADIEAVVERAKK-LGLESVVCVNNPET-SAAA-AALGPDYVAVEPPELIGTGIPVSKAKPEVVEDAVEAVKKVNPDV 174 (223)
T ss_pred cCHHHHHHHHHHHHH-CCCeEEEEcCCHHH-HHHH-hcCCCCEEEEeCccccccCCCCCcCCHHHHHHHHHHHHhccCCC
Confidence 344568889999998 69999999998544 3443 34454433321 35777677777777631344
Q ss_pred EEEEcCCccCHHHHHh---CC-ccEEeCC
Q 004479 661 LIMVGEGINDAPALAA---AT-VGIVLAQ 685 (750)
Q Consensus 661 VamvGDG~NDapAL~~---Ad-VGIamg~ 685 (750)
-...|=|+|+....+. ++ =|+.+|+
T Consensus 175 pvi~GggI~~~e~~~~~~~~gadGvlVGs 203 (223)
T PRK04302 175 KVLCGAGISTGEDVKAALELGADGVLLAS 203 (223)
T ss_pred EEEEECCCCCHHHHHHHHcCCCCEEEEeh
Confidence 5567889876655443 43 3566654
No 216
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.38 E-value=2.1e+02 Score=30.27 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=36.7
Q ss_pred EecCCHhhHHHHHHHHHh-hcCCeEEEEcCCcc-C---HHHHHh--CCccEEeCCCCcHH--HHhhcCEEEec
Q 004479 638 YCSLKPEDKLNHVKRTSR-DMGGGLIMVGEGIN-D---APALAA--ATVGIVLAQRASAT--AIAVADVLLLR 701 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~-~~g~~VamvGDG~N-D---apAL~~--AdVGIamg~~~s~~--A~~aADivL~~ 701 (750)
|.-+||..=.++++.+.- -.|+.|..+|.|.- = +..|.. |.|-+.-.. ..+. ....|||++.-
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-TRDLAAHTRQADIVVAA 208 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-CCCHHHHhhhCCEEEEc
Confidence 456677766666665532 13899999999844 2 234444 444444332 2333 34679998863
No 217
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=31.26 E-value=1.2e+02 Score=29.52 Aligned_cols=103 Identities=12% Similarity=0.174 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCcEEEEecCCCHHH-HHHHHHHcCCc-eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHhC
Q 004479 600 SDVIAELKDHARLRVMMLTGDHESS-AQRVANAVGIN-EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAAA 677 (750)
Q Consensus 600 ~~~I~~Lk~~agi~v~mlTGD~~~t-A~~iA~~~GI~-~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~A 677 (750)
-++++.+++ .+-++.+++=.+... ...+.+.+|+. ..|.=-+|++=...++++++. | .-+.+|++.-
T Consensus 67 l~al~~a~~-~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~-G-~~viVGg~~~-------- 135 (176)
T PF06506_consen 67 LRALAKAKK-YGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAE-G-VDVIVGGGVV-------- 135 (176)
T ss_dssp HHHHHHCCC-CTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHT-T---EEEESHHH--------
T ss_pred HHHHHHHHh-cCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHc-C-CcEEECCHHH--------
Confidence 334444443 233444443333332 44445555553 234445677777788888877 5 5677887631
Q ss_pred CccEEeCCCCcHHHH-hhcCEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 004479 678 TVGIVLAQRASATAI-AVADVLLLRNNISGVPFCVAKSRQTTSLVKQ 723 (750)
Q Consensus 678 dVGIamg~~~s~~A~-~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ 723 (750)
.+.|. .--..++...+-.++..++..++++.+..++
T Consensus 136 ----------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 136 ----------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp ----------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 11222 2344567777888999999999999888765
No 218
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=31.17 E-value=4.6e+02 Score=32.75 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCceE-----------EEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCC
Q 004479 194 MFNLAHIAEEFFTSRAMVDVKELKENYPDSVL-----------VLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGE 262 (750)
Q Consensus 194 ~~~l~~~~e~~~~~ra~~~l~~L~~~~p~~~~-----------v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge 262 (750)
+..+.++++++..+++.++++++........+ .+.. .++.-|-...+...|..|-|.+.++. +
T Consensus 123 l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~-----~eLv~GDiV~l~~Gd~IPaDg~li~g-~ 196 (903)
T PRK15122 123 LSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPM-----RELVPGDIVHLSAGDMIPADVRLIES-R 196 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEH-----HHCCCCCEEEECCCCEEeeeEEEEEc-C
Confidence 33445678899999999999998754432222 1211 11222357888899999999888863 3
Q ss_pred ccccCcEEEecee
Q 004479 263 AVPVDCEVYQGTA 275 (750)
Q Consensus 263 ~VPaDg~vl~G~~ 275 (750)
-+=+|=-.+.|++
T Consensus 197 ~l~VDES~LTGES 209 (903)
T PRK15122 197 DLFISQAVLTGEA 209 (903)
T ss_pred ceEEEccccCCCC
Confidence 3455655666665
No 219
>TIGR00330 glpX fructose-1,6-bisphosphatase, class II. In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase.
Probab=30.66 E-value=1.5e+02 Score=31.54 Aligned_cols=84 Identities=18% Similarity=0.310 Sum_probs=56.2
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCc-----------------------eEEecCCHh
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGIN-----------------------EVYCSLKPE 644 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~-----------------------~v~a~~~P~ 644 (750)
+.+-|.+|.+ +.|+++|+ +|.+|.++|--....+.+.|.. .|++ ++.+|+-|+
T Consensus 158 V~vLdRpRH~--~lI~eiR~-~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGAPEGVlaAaAlkclGG~mqgrL~~~ 234 (321)
T TIGR00330 158 VTILAKPRHD--AVIAEMQQ-LGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAAIRALGGDMQGRLLPR 234 (321)
T ss_pred EEEEcCchHH--HHHHHHHH-cCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHHHHHHHhcCceeEEEEccc
Confidence 3445777765 88999999 7999999986455555554532 4554 478888777
Q ss_pred -------------hHHHHHHHHHh------h-------cCCeEEEEcCCccCHHHHH
Q 004479 645 -------------DKLNHVKRTSR------D-------MGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 645 -------------~K~~~V~~l~~------~-------~g~~VamvGDG~NDapAL~ 675 (750)
+..+.-++.+. - .|.-|.|+.-|+-|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~e~~r~~~~GiD~~kv~~~ddLv~gddv~FaATGVTdG~lL~ 291 (321)
T TIGR00330 235 HDVKGDNEENRRIAEQEIARCKAMGVDVNKVLRLEDLVRGDNVIFSATGITKGDLLK 291 (321)
T ss_pred cccccccccccCCCHHHHHHHHHcCCChhhEeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 33322222210 0 2568999999999998886
No 220
>TIGR00603 rad25 DNA repair helicase rad25. All proteins in this family for which functions are known are DNA-DNA helicases used for the initiation of nucleotide excision repair and transacription as part of the TFIIH complex.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=30.48 E-value=2.1e+02 Score=34.53 Aligned_cols=53 Identities=9% Similarity=0.221 Sum_probs=43.3
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCC-eEEEE
Q 004479 610 ARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGG-GLIMV 664 (750)
Q Consensus 610 agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~-~Vamv 664 (750)
.|-++.+.+ |+...+..+++.+|..-+++++++++..++++.+++. +. .|.++
T Consensus 495 ~g~kiLVF~-~~~~~l~~~a~~L~~~~I~G~ts~~ER~~il~~Fr~~-~~i~vLv~ 548 (732)
T TIGR00603 495 RGDKIIVFS-DNVFALKEYAIKLGKPFIYGPTSQQERMQILQNFQHN-PKVNTIFL 548 (732)
T ss_pred cCCeEEEEe-CCHHHHHHHHHHcCCceEECCCCHHHHHHHHHHHHhC-CCccEEEE
Confidence 477888886 6677899999999998899999999999999999854 33 44444
No 221
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=30.34 E-value=1.8e+02 Score=30.84 Aligned_cols=89 Identities=20% Similarity=0.362 Sum_probs=57.9
Q ss_pred EEEEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH---HcCCceEEecCCHhhHHHHHHHHHhh--cCCeE
Q 004479 587 TLIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVAN---AVGINEVYCSLKPEDKLNHVKRTSRD--MGGGL 661 (750)
Q Consensus 587 G~i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~---~~GI~~v~a~~~P~~K~~~V~~l~~~--~g~~V 661 (750)
|++...+.+=|++.++++.|++ .|.++..+|--+-.+-+..++ ++|+.++--+--+.-=..+...|++. .+++|
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~-~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa~~~a~ylk~~~~~~k~V 109 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKS-LGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSAYAIADYLKKRKPFGKKV 109 (306)
T ss_pred cceeecCCCCCChHHHHHHHHH-cCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChHHHHHHHHHHhCcCCCeE
Confidence 7788899999999999999999 699999999988777766654 56776432222222222334444332 13555
Q ss_pred EEEc-CCccCHHHHHhCC
Q 004479 662 IMVG-EGINDAPALAAAT 678 (750)
Q Consensus 662 amvG-DG~NDapAL~~Ad 678 (750)
-.+| +|+++- |++|.
T Consensus 110 yvig~~gi~~e--L~~aG 125 (306)
T KOG2882|consen 110 YVIGEEGIREE--LDEAG 125 (306)
T ss_pred EEecchhhhHH--HHHcC
Confidence 5554 566653 55555
No 222
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=30.32 E-value=1.2e+02 Score=27.39 Aligned_cols=64 Identities=20% Similarity=0.357 Sum_probs=41.7
Q ss_pred cCCCchhHHHHHHHHHhcCCcEE---EEecCCCHHHHHH------HHHHcCCceEE----ecCCHhhHHHHHHHHHhh
Q 004479 592 EDRPRPGVSDVIAELKDHARLRV---MMLTGDHESSAQR------VANAVGINEVY----CSLKPEDKLNHVKRTSRD 656 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v---~mlTGD~~~tA~~------iA~~~GI~~v~----a~~~P~~K~~~V~~l~~~ 656 (750)
...++++.++-++.|++. |+++ +++-||++.+..+ .|+++||.-.. ...+.++=.+.|+.+-+.
T Consensus 9 a~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D 85 (117)
T PF00763_consen 9 AKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNED 85 (117)
T ss_dssp HHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCC
Confidence 356788999999999985 7763 4668999887654 48899997433 344666667777777654
No 223
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=29.99 E-value=4e+02 Score=25.46 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=55.6
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe-------cCCHhhHHHHHHHHHhhcCCeEEEEc
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC-------SLKPEDKLNHVKRTSRDMGGGLIMVG 665 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a-------~~~P~~K~~~V~~l~~~~g~~VamvG 665 (750)
+.+++-+.+.+..-++.++--+.++.|++......-+...|.++++. +..|+.-.+.+..+-++.+..+..+|
T Consensus 11 g~l~~~s~el~~~A~~l~~~v~~v~~G~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~a~al~~~i~~~~p~~Vl~~ 90 (168)
T cd01715 11 GELRELTLEAVTAARKLGGEVTALVIGSGAEAVAAALKAYGADKVLVAEDPALAHYLAEPYAPALVALAKKEKPSHILAG 90 (168)
T ss_pred CChHHHHHHHHHHHHHhCCCEEEEEECCChHHHHHHHHhcCCCEEEEecChhhcccChHHHHHHHHHHHHhcCCCEEEEC
Confidence 56888888999887774344455666877654444445679988764 35677777777776443356677777
Q ss_pred CCcc--CHHHHHhCCcc
Q 004479 666 EGIN--DAPALAAATVG 680 (750)
Q Consensus 666 DG~N--DapAL~~AdVG 680 (750)
...+ |.++.-++-.|
T Consensus 91 ~t~~g~~la~rlAa~L~ 107 (168)
T cd01715 91 ATSFGKDLAPRVAAKLD 107 (168)
T ss_pred CCccccchHHHHHHHhC
Confidence 7643 44444444333
No 224
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=29.87 E-value=2.7e+02 Score=27.57 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCcEEEEec------C-------CCHHHHHHHHHHcCCceEEecCC
Q 004479 599 VSDVIAELKDHARLRVMMLT------G-------DHESSAQRVANAVGINEVYCSLK 642 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~mlT------G-------D~~~tA~~iA~~~GI~~v~a~~~ 642 (750)
+.-++..+++ .|.+|.-++ + .+.+.++.+|+.+||..+..+..
T Consensus 12 S~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~ 67 (194)
T cd01994 12 SCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEIS 67 (194)
T ss_pred HHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCC
Confidence 3444555555 366655444 1 25678899999999987666543
No 225
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=29.47 E-value=3.4e+02 Score=31.74 Aligned_cols=49 Identities=16% Similarity=0.064 Sum_probs=30.3
Q ss_pred HHHHHHHHhHHHHH-HHHHHHHCCCCChHHHHHHHHHHHHHHhhhHHHHH
Q 004479 142 LAVAFPLVGVSASL-DALTDIAGGKVNIHVLMAFAAFASIFMGNSLEGGL 190 (750)
Q Consensus 142 ~~~~~~~~g~~~~~-~a~~~l~~~~~~~~~L~~la~~~a~~~g~~~~~~~ 190 (750)
...+.++.||..+. ..++.++++....|+++.+.++....+-+...|..
T Consensus 351 Laavli~v~~~l~~~~~~~~~~~~~~~~e~~v~~~t~~~tv~~~l~~GV~ 400 (554)
T COG0659 351 LAAVLILVGWGLLDWSLLKPLLRKLPRGELLVLLTTALLTVFFDLVIGVV 400 (554)
T ss_pred HHHHHHHHHHHhccHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777665 55666555556777887777776665555554433
No 226
>PRK12388 fructose-1,6-bisphosphatase II-like protein; Reviewed
Probab=29.44 E-value=1.6e+02 Score=31.40 Aligned_cols=84 Identities=14% Similarity=0.186 Sum_probs=56.0
Q ss_pred EEecCCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHH-cCCc-----------------------eEEecCCHh
Q 004479 589 IHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANA-VGIN-----------------------EVYCSLKPE 644 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~-~GI~-----------------------~v~a~~~P~ 644 (750)
+.+-|.+|.+ +.|+++|+ +|.+|.++|--....|...|.. .|++ ++.+|+-|.
T Consensus 158 V~vLdRpRH~--~lI~eiR~-~GarI~Li~DGDVa~ai~~~~~~s~vD~~~GiGGAPEGVlaAaAlkclGG~mqgRL~~~ 234 (321)
T PRK12388 158 MVTLDKPRLS--AAIEEATQ-LGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDF 234 (321)
T ss_pred EEEEcCchHH--HHHHHHHH-cCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHHHHHHHhCCceeEEEEccC
Confidence 3455777775 89999999 7999999986455555555532 5554 488888776
Q ss_pred hH------------HHHHHHHHhh--------------cCCeEEEEcCCccCHHHHH
Q 004479 645 DK------------LNHVKRTSRD--------------MGGGLIMVGEGINDAPALA 675 (750)
Q Consensus 645 ~K------------~~~V~~l~~~--------------~g~~VamvGDG~NDapAL~ 675 (750)
+. .+-.++.++. .|.-|.|+.-|+-|...|+
T Consensus 235 ~~~~g~~~~~~~~~~~e~~r~~~~GiD~~kv~~~ddLv~gddv~FaATGVTdG~lL~ 291 (321)
T PRK12388 235 CQAKGDYTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVN 291 (321)
T ss_pred cccccccccccccCHHHHHHHHHcCCChhhEeEHHHccCCCCEEEEEeCCCCCCccC
Confidence 61 1111222211 2567899999999998886
No 227
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=29.03 E-value=4.6e+02 Score=32.03 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-----CCceEEEEcCCCCCCCcCCCcEEEEecCCcCCCCEEEEcCCCccccCcEEE
Q 004479 197 LAHIAEEFFTSRAMVDVKELKENY-----PDSVLVLNVDDDNLPDVSDLAYRSVPVHDVEVGSYILVGAGEAVPVDCEVY 271 (750)
Q Consensus 197 l~~~~e~~~~~ra~~~l~~L~~~~-----p~~~~v~r~~~~~~~~~~~~~~~~V~~~~l~~GDiI~v~~Ge~VPaDg~vl 271 (750)
.-.+++++..+++.+.++++.... ..+...+... ++.-|-...+...|.+|-|-+.++ |+..-+|=-.+
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~-----~Lv~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~L 143 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPAS-----ELVPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhh-----hCcCCCEEEECCCCEEeceEEEEe-cCceEEEcccc
Confidence 345678899999999998875322 1221222111 122235778888888899988875 33333444444
Q ss_pred ecee
Q 004479 272 QGTA 275 (750)
Q Consensus 272 ~G~~ 275 (750)
.|++
T Consensus 144 TGES 147 (755)
T TIGR01647 144 TGES 147 (755)
T ss_pred cCCc
Confidence 4544
No 228
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=28.08 E-value=91 Score=25.34 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCeEEEEcCC-ccCHHHHHhCCccEE-e--CCCCcHHHH---hhcCEEEecCCCC
Q 004479 658 GGGLIMVGEG-INDAPALAAATVGIV-L--AQRASATAI---AVADVLLLRNNIS 705 (750)
Q Consensus 658 g~~VamvGDG-~NDapAL~~AdVGIa-m--g~~~s~~A~---~aADivL~~~~l~ 705 (750)
...+.||||. ..|..+=+++++--. + |....+... ..+|+|+ ++|.
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv--~~l~ 73 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV--DDLK 73 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE--SSGG
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE--CCHH
Confidence 3579999999 999999999986432 2 221222222 4788987 5554
No 229
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=27.65 E-value=1.2e+02 Score=24.67 Aligned_cols=22 Identities=55% Similarity=0.774 Sum_probs=15.9
Q ss_pred cEEEEe---cCCcCCCCEEEEcCCC
Q 004479 241 AYRSVP---VHDVEVGSYILVGAGE 262 (750)
Q Consensus 241 ~~~~V~---~~~l~~GDiI~v~~Ge 262 (750)
..++|+ +.++.|||.|++..|-
T Consensus 26 ~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 26 VRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp EEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred cEEEEEEEEeCCCCCCCEEEEecCh
Confidence 677775 4678999999999984
No 230
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=27.18 E-value=4.6e+02 Score=30.55 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCC-HHHHHHHHHHcCCc-eEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCcc
Q 004479 598 GVSDVIAELKDHARLRVMMLTGDH-ESSAQRVANAVGIN-EVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGIN 669 (750)
Q Consensus 598 ~a~~~I~~Lk~~agi~v~mlTGD~-~~tA~~iA~~~GI~-~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~N 669 (750)
|+-++++..++ .+-++.+++=.+ ...+..++.-+|++ +.+.-.+++|=...|+.++++ |. -+.|||++-
T Consensus 95 Dil~al~~a~~-~~~~iavv~~~~~~~~~~~~~~~l~~~i~~~~~~~~~e~~~~v~~lk~~-G~-~~vvG~~~~ 165 (538)
T PRK15424 95 DVMQALARARK-LTSSIGVVTYQETIPALVAFQKTFNLRIEQRSYVTEEDARGQINELKAN-GI-EAVVGAGLI 165 (538)
T ss_pred HHHHHHHHHHh-cCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHC-CC-CEEEcCchH
Confidence 56677777777 466777777655 44567788888885 578888999999999999987 65 456799853
No 231
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=26.82 E-value=2.5e+02 Score=23.17 Aligned_cols=47 Identities=26% Similarity=0.275 Sum_probs=31.8
Q ss_pred EEEecCCCchhHHHHHHHHHhcCCcEEEE-ecCCCHHHHHHHHHHcCCc
Q 004479 588 LIHLEDRPRPGVSDVIAELKDHARLRVMM-LTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 588 ~i~~~D~lr~~a~~~I~~Lk~~agi~v~m-lTGD~~~tA~~iA~~~GI~ 635 (750)
++.+.+..++.+.+..+.||+ .|+++.+ ..+.+..--..-|++.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~-~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSD-AGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 344556778888899999998 6998877 4555555555555555553
No 232
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.69 E-value=1.3e+02 Score=31.99 Aligned_cols=62 Identities=23% Similarity=0.278 Sum_probs=36.9
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCCccC----HHHHHh------CCccEEeCCCCcHH--HHhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEGIND----APALAA------ATVGIVLAQRASAT--AIAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG~ND----apAL~~------AdVGIamg~~~s~~--A~~aADivL~ 700 (750)
|.-+||..=.++++.+.-. .|+.|..+|.+..= +-+|.. |.|-++... ..+. ....||+++.
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~-t~~l~~~~~~ADIVI~ 210 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSR-TPDLAEECREADFLFV 210 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCC-chhHHHHHHhCCEEEE
Confidence 4567777666666665421 38999999987221 223333 666666543 3333 3467888874
No 233
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=26.61 E-value=1.8e+02 Score=30.38 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=46.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEe---------cCCC---HHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCC
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMML---------TGDH---ESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGG 659 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~ml---------TGD~---~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~ 659 (750)
++....+.++..+.+++ .|+.++++ ++.+ ...+..+|.++|.+-+-....+ ..+.++++.+...-
T Consensus 121 ~~~~~~~~~~v~~~~~~-~g~pl~vi~~~~g~~~e~~~~~~~i~~a~~~a~e~GAD~vKt~~~~--~~~~l~~~~~~~~i 197 (267)
T PRK07226 121 EAEMLEDLGEVAEECEE-WGMPLLAMMYPRGPGIKNEYDPEVVAHAARVAAELGADIVKTNYTG--DPESFREVVEGCPV 197 (267)
T ss_pred HHHHHHHHHHHHHHHHH-cCCcEEEEEecCCCccCCCccHHHHHHHHHHHHHHCCCEEeeCCCC--CHHHHHHHHHhCCC
Confidence 44567788888888887 68887775 3322 2334577888999877665443 23445555432135
Q ss_pred eEEEEcCCcc
Q 004479 660 GLIMVGEGIN 669 (750)
Q Consensus 660 ~VamvGDG~N 669 (750)
.|.+.| |++
T Consensus 198 pV~a~G-Gi~ 206 (267)
T PRK07226 198 PVVIAG-GPK 206 (267)
T ss_pred CEEEEe-CCC
Confidence 677778 777
No 234
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.24 E-value=3.1e+02 Score=25.54 Aligned_cols=67 Identities=10% Similarity=0.209 Sum_probs=42.3
Q ss_pred EEEEEecCCCchhHHHHHHHHHhcCCc--EEEEecCCC------HHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHh
Q 004479 586 VTLIHLEDRPRPGVSDVIAELKDHARL--RVMMLTGDH------ESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSR 655 (750)
Q Consensus 586 lG~i~~~D~lr~~a~~~I~~Lk~~agi--~v~mlTGD~------~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~ 655 (750)
+|+=.+.=.--+..+++++.|++ .|. ..+|+-|-- ...-+.-++++|++.+|..-+|-+ +++..+++
T Consensus 56 VglS~l~~~~~~~~~~~~~~l~~-~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~~vF~pgt~~~--~iv~~l~~ 130 (134)
T TIGR01501 56 ILVSSLYGHGEIDCKGLRQKCDE-AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFDRVFAPGTPPE--VVIADLKK 130 (134)
T ss_pred EEEecccccCHHHHHHHHHHHHH-CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCCEEECcCCCHH--HHHHHHHH
Confidence 44444444555678889999998 576 356676631 111244579999999998766553 35555544
No 235
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=26.12 E-value=4e+02 Score=30.74 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=59.2
Q ss_pred CceEEEEEecCCCchhH-HHHHHHHHhcCCcEEEEecCCCH---HHHHHHHHHcCCceEEecC---CHhhHHHHHHHHHh
Q 004479 583 NEKVTLIHLEDRPRPGV-SDVIAELKDHARLRVMMLTGDHE---SSAQRVANAVGINEVYCSL---KPEDKLNHVKRTSR 655 (750)
Q Consensus 583 ~~~lG~i~~~D~lr~~a-~~~I~~Lk~~agi~v~mlTGD~~---~tA~~iA~~~GI~~v~a~~---~P~~K~~~V~~l~~ 655 (750)
+..+|++..+|-++... +.+... +++.+.|-..-|.++ +.+.++. +.|++-+.-.. ....-.+.|+++++
T Consensus 202 g~liGIIT~~DIl~~~~~p~a~~D--~~GrL~Vgaavg~~~~~~~~~~~l~-~ag~d~i~id~a~G~s~~~~~~i~~ik~ 278 (495)
T PTZ00314 202 GELVALVSRSDLKKNRGYPNASLD--SNGQLLVGAAISTRPEDIERAAALI-EAGVDVLVVDSSQGNSIYQIDMIKKLKS 278 (495)
T ss_pred CcEEEEEEehHhhhcccCchhhhc--cCCCEEEEEEECCCHHHHHHHHHHH-HCCCCEEEEecCCCCchHHHHHHHHHHh
Confidence 45699999999887643 222211 224566756666554 4455544 35887776554 33444678888887
Q ss_pred hcCCeEEEEcCCc--cCHHHHHhCCcc
Q 004479 656 DMGGGLIMVGEGI--NDAPALAAATVG 680 (750)
Q Consensus 656 ~~g~~VamvGDG~--NDapAL~~AdVG 680 (750)
.......+.|+.. +|+-.+.+|.+-
T Consensus 279 ~~~~~~v~aG~V~t~~~a~~~~~aGad 305 (495)
T PTZ00314 279 NYPHVDIIAGNVVTADQAKNLIDAGAD 305 (495)
T ss_pred hCCCceEEECCcCCHHHHHHHHHcCCC
Confidence 6445667778876 577777777543
No 236
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.93 E-value=1.5e+02 Score=31.18 Aligned_cols=63 Identities=22% Similarity=0.312 Sum_probs=37.7
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCCccC----HHHHHh--CCccEEeCCCCcHHH--HhhcCEEEec
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEGIND----APALAA--ATVGIVLAQRASATA--IAVADVLLLR 701 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG~ND----apAL~~--AdVGIamg~~~s~~A--~~aADivL~~ 701 (750)
|.-+||..=.++++.+.-. .|+.|+++|.+..= +-+|.+ |.|-++-.. ..+.. ...|||++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~-T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK-TKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC-CCCHHHHHhhCCEEEEc
Confidence 4567887777777766421 38999999998321 224444 445444432 33332 3569998853
No 237
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.83 E-value=1.5e+02 Score=31.42 Aligned_cols=63 Identities=17% Similarity=0.321 Sum_probs=38.0
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCC-ccCHH---HH--HhCCccEEeCCCCcHH--HHhhcCEEEec
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEG-INDAP---AL--AAATVGIVLAQRASAT--AIAVADVLLLR 701 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG-~NDap---AL--~~AdVGIamg~~~s~~--A~~aADivL~~ 701 (750)
|.-+||..=.++++.+.-. .|++|..+|.| +==-| .| +.|.|-+.-.. ..+. ....||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~-t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL-TKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHhCCEEEEe
Confidence 4557787777777665431 38999999998 22222 33 23566665443 3333 34678988753
No 238
>COG1585 Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=25.81 E-value=3.6e+02 Score=25.32 Aligned_cols=19 Identities=21% Similarity=0.330 Sum_probs=13.5
Q ss_pred cEEEEecCCcCCCCEEEEc
Q 004479 241 AYRSVPVHDVEVGSYILVG 259 (750)
Q Consensus 241 ~~~~V~~~~l~~GDiI~v~ 259 (750)
.|+-..-+++.+||.|.|-
T Consensus 110 ~Wra~~~~~l~~G~~V~Vv 128 (140)
T COG1585 110 SWRARSDEDLPAGDRVEVV 128 (140)
T ss_pred EeEEecCCCCCCCCEEEEE
Confidence 5555555888888888764
No 239
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.75 E-value=1.5e+02 Score=31.40 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=47.2
Q ss_pred ecCCCchhHHHHHHHHHhcCCcE---EEEecCCCHHHHHHH------HHHcCCceEEecC----CHhhHHHHHHHHHhh
Q 004479 591 LEDRPRPGVSDVIAELKDHARLR---VMMLTGDHESSAQRV------ANAVGINEVYCSL----KPEDKLNHVKRTSRD 656 (750)
Q Consensus 591 ~~D~lr~~a~~~I~~Lk~~agi~---v~mlTGD~~~tA~~i------A~~~GI~~v~a~~----~P~~K~~~V~~l~~~ 656 (750)
+.+++|++.++-|+.|+++.|++ .+++-||++....++ |+++||+-.|-++ ++++=.+.++.|.+.
T Consensus 11 ~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d 89 (283)
T PRK14192 11 LAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNAN 89 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 35678899999999998643554 366789998876654 6889998766655 455556677777654
No 240
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=24.94 E-value=3e+02 Score=24.62 Aligned_cols=73 Identities=23% Similarity=0.217 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCcEEEEec-CCCH-----HH--HHHHHHHcCCceEE-----ecCCHhhHHHHHHHHHhhcCCeEEEEcC
Q 004479 600 SDVIAELKDHARLRVMMLT-GDHE-----SS--AQRVANAVGINEVY-----CSLKPEDKLNHVKRTSRDMGGGLIMVGE 666 (750)
Q Consensus 600 ~~~I~~Lk~~agi~v~mlT-GD~~-----~t--A~~iA~~~GI~~v~-----a~~~P~~K~~~V~~l~~~~g~~VamvGD 666 (750)
++-+++|++ .|++.++-= .|++ .. -.+.|+++||.-+| ...++++=..+.+.+.+..+.+.++|.-
T Consensus 17 ~~d~~~la~-~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~~~~~~~v~~f~~~l~~~~~Pvl~hC~s 95 (110)
T PF04273_consen 17 PEDLAQLAA-QGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGGAITEEDVEAFADALESLPKPVLAHCRS 95 (110)
T ss_dssp HHHHHHHHH-CT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TTT--HHHHHHHHHHHHTTTTSEEEE-SC
T ss_pred HHHHHHHHH-CCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCCCCCHHHHHHHHHHHHhCCCCEEEECCC
Confidence 456778898 699877753 3422 22 34789999997654 4566776677777777654566777887
Q ss_pred CccCHHHH
Q 004479 667 GINDAPAL 674 (750)
Q Consensus 667 G~NDapAL 674 (750)
| |.+.+|
T Consensus 96 G-~Ra~~l 102 (110)
T PF04273_consen 96 G-TRASAL 102 (110)
T ss_dssp S-HHHHHH
T ss_pred C-hhHHHH
Confidence 7 455544
No 241
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=24.56 E-value=1.2e+02 Score=23.27 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=29.2
Q ss_pred cCCCceEEEEcCCCCCCCcCCCcEEEEec-CCcCCCCEEEEcCCCcccc
Q 004479 219 NYPDSVLVLNVDDDNLPDVSDLAYRSVPV-HDVEVGSYILVGAGEAVPV 266 (750)
Q Consensus 219 ~~p~~~~v~r~~~~~~~~~~~~~~~~V~~-~~l~~GDiI~v~~Ge~VPa 266 (750)
...+++.|+.++| ++..|+. .+..+||.|.+.+.+..+.
T Consensus 3 i~~~~aiVlT~dG---------eF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDG---------EFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCC---------cEEEEeCCCCCcccCEEEEechhhccc
Confidence 3456777887654 7888764 3699999999998887653
No 242
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=24.40 E-value=1.5e+02 Score=32.32 Aligned_cols=58 Identities=26% Similarity=0.405 Sum_probs=46.1
Q ss_pred EEecCCCHHHHHHHHHHcCCce--EEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHHHHHh
Q 004479 615 MMLTGDHESSAQRVANAVGINE--VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAPALAA 676 (750)
Q Consensus 615 ~mlTGD~~~tA~~iA~~~GI~~--v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDapAL~~ 676 (750)
.-=+|.+-+-...-|+.+||.- |.-..+|++|.+-++.+ |..|...||--+|+-+.+.
T Consensus 79 aaSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~----GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 79 AASAGNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRGY----GAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred EecCCcHHHHHHHHHHHhCCCEEEEecCCCcHHHHHHHHhc----CCEEEEECCCHHHHHHHHH
Confidence 3345777777778889999975 56789999999987653 7789999999999887765
No 243
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.18 E-value=1.4e+02 Score=31.59 Aligned_cols=63 Identities=17% Similarity=0.234 Sum_probs=37.4
Q ss_pred EecCCHhhHHHHHHHHHh-hcCCeEEEEcCCc-c---CHHHHH--hCCccEEeCCCCcHH--HHhhcCEEEec
Q 004479 638 YCSLKPEDKLNHVKRTSR-DMGGGLIMVGEGI-N---DAPALA--AATVGIVLAQRASAT--AIAVADVLLLR 701 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~-~~g~~VamvGDG~-N---DapAL~--~AdVGIamg~~~s~~--A~~aADivL~~ 701 (750)
|.-+||..=.++++.+.- -.|++|+.+|-|. = =+.+|. .|.|-+.-.. ..+. ....||+++.-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~-t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR-SKDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC-chhHHHHHhhCCEEEEC
Confidence 456777776677666531 1389999999984 1 122332 2566666543 3333 34578998853
No 244
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=24.04 E-value=1.3e+02 Score=27.03 Aligned_cols=40 Identities=20% Similarity=0.330 Sum_probs=29.6
Q ss_pred CchhHHHHHHHHHhcCCc-EEEEecCCCHHHHHHHHHHcCCc
Q 004479 595 PRPGVSDVIAELKDHARL-RVMMLTGDHESSAQRVANAVGIN 635 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi-~v~mlTGD~~~tA~~iA~~~GI~ 635 (750)
..+.+.+.++++.+. |+ .+|+.+|...+.+...|++.||.
T Consensus 64 ~~~~~~~~v~~~~~~-g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAAL-GVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHH-T-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 456788999999985 66 69999999999999999999885
No 245
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=22.79 E-value=2e+02 Score=25.72 Aligned_cols=42 Identities=10% Similarity=0.186 Sum_probs=31.6
Q ss_pred CchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEe
Q 004479 595 PRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYC 639 (750)
Q Consensus 595 lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a 639 (750)
--+++.++++.+|+ .|.+++.+|++.+ -...+.+-|+..++.
T Consensus 55 ~t~e~i~~~~~a~~-~g~~iI~IT~~~~--l~~~~~~~~~~~~~~ 96 (119)
T cd05017 55 NTEETLSAVEQAKE-RGAKIVAITSGGK--LLEMAREHGVPVIII 96 (119)
T ss_pred CCHHHHHHHHHHHH-CCCEEEEEeCCch--HHHHHHHcCCcEEEC
Confidence 34688999999999 5999999999875 334566667665553
No 246
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=22.79 E-value=5.4e+02 Score=25.28 Aligned_cols=87 Identities=10% Similarity=0.212 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHhcCCcEEE--EecCCCHHHHHHHHHHcCCceEEe------cCCHhhHHHHHHHHHhhcCCeEEE-EcCC
Q 004479 597 PGVSDVIAELKDHARLRVM--MLTGDHESSAQRVANAVGINEVYC------SLKPEDKLNHVKRTSRDMGGGLIM-VGEG 667 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~--mlTGD~~~tA~~iA~~~GI~~v~a------~~~P~~K~~~V~~l~~~~g~~Vam-vGDG 667 (750)
....+.++.+++ .|+++. +.+.+.......-+.++|.+-+-. +..+....+.++.+++.......+ .| |
T Consensus 89 ~~~~~~i~~~~~-~g~~~~~~~~~~~t~~~~~~~~~~~g~d~v~~~pg~~~~~~~~~~~~~i~~l~~~~~~~~i~v~G-G 166 (206)
T TIGR03128 89 ATIKGAVKAAKK-HGKEVQVDLINVKDKVKRAKELKELGADYIGVHTGLDEQAKGQNPFEDLQTILKLVKEARVAVAG-G 166 (206)
T ss_pred HHHHHHHHHHHH-cCCEEEEEecCCCChHHHHHHHHHcCCCEEEEcCCcCcccCCCCCHHHHHHHHHhcCCCcEEEEC-C
Q ss_pred cc--CHHHHHhCCcc-EEeCC
Q 004479 668 IN--DAPALAAATVG-IVLAQ 685 (750)
Q Consensus 668 ~N--DapAL~~AdVG-Iamg~ 685 (750)
+| +++.+.++++. +++|+
T Consensus 167 I~~~n~~~~~~~Ga~~v~vGs 187 (206)
T TIGR03128 167 INLDTIPDVIKLGPDIVIVGG 187 (206)
T ss_pred cCHHHHHHHHHcCCCEEEEee
No 247
>TIGR03882 cyclo_dehyd_2 bacteriocin biosynthesis cyclodehydratase domain. This model describes a ThiF-like domain of a fusion protein found in clusters associated with the production of TOMMs (thiazole/oxazole-modified microcins), small bacteriocins with characteristic heterocycle modifications. This domain is presumed to act as a cyclodehydratase, as do members of the SagC family modeled by TIGR03603.
Probab=22.46 E-value=2.8e+02 Score=27.50 Aligned_cols=100 Identities=18% Similarity=0.103 Sum_probs=55.4
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecCCHhhHHHHHHHHHhhcCCeEEEEcCCccCHH---
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKRTSRDMGGGLIMVGEGINDAP--- 672 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG~NDap--- 672 (750)
.+++.+++.+|.+ .|+=+---.+.+... ...-..+ ..++...-+++++. +|...|.|.+-..
T Consensus 58 ~~~v~~~L~~L~~-~G~l~~~~~~~~~~~-~~f~~~~----------g~~~~~a~~~l~~~---~V~V~~~G~~~~~~l~ 122 (193)
T TIGR03882 58 AEEVLYALDRLER-RGYLVEDAPELPPAA-AAFWSGL----------GVDPAAALERLRQL---TVTVLSFGEGGAAALA 122 (193)
T ss_pred HHHHHHHHHHHHH-CCCEeccCCCCCHHH-HHHHHHc----------CCCHHHHHHHHhcC---cEEEEecCCCcHHHHH
Confidence 6679999999998 585332211112222 2222223 33555566667643 6777777743322
Q ss_pred -HHHhCCccEEeCCCCcHHHHhhcCEEEecCCCCCHHHHHHHHHHHHH
Q 004479 673 -ALAAATVGIVLAQRASATAIAVADVLLLRNNISGVPFCVAKSRQTTS 719 (750)
Q Consensus 673 -AL~~AdVGIamg~~~s~~A~~aADivL~~~~l~~l~~~i~~~R~~~~ 719 (750)
+|+.+.||+.-. ...-++|+.+|-+ -+++-.+.|+..+
T Consensus 123 ~aLaa~Gv~~~~~-------~a~l~vVl~~Dyl--~p~L~~~n~~~l~ 161 (193)
T TIGR03882 123 AALAAAGIRIAPS-------EADLTVVLTDDYL--DPELAAINQRALA 161 (193)
T ss_pred HHHHHcCCCccCC-------CCCEEEEEeCCCC--ChHHHHHHHHHHH
Confidence 467777776541 1235777887766 4555555555443
No 248
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.44 E-value=1.7e+02 Score=31.02 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=36.3
Q ss_pred EecCCHhhHHHHHHHHHh-hcCCeEEEEcCCccC----HHHHHh--CCccEEeCCCCcHH--HHhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSR-DMGGGLIMVGEGIND----APALAA--ATVGIVLAQRASAT--AIAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~-~~g~~VamvGDG~ND----apAL~~--AdVGIamg~~~s~~--A~~aADivL~ 700 (750)
|.-+||..=.++++.+.- -.|+.|.++|.+..= +.+|.. |.|-++-.. ..+. ....|||++.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~-T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK-TRNLKQLTKEADILVV 205 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC-CCCHHHHHhhCCEEEE
Confidence 456777777777766542 138999999987221 223433 444454432 3333 2356898875
No 249
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=22.38 E-value=7.3e+02 Score=24.16 Aligned_cols=85 Identities=13% Similarity=0.234 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHhcCCcEEEE--ecCCCHHHHHHHHHHcCCceEEecC--CHhhH-----HHHHHHHHhhcCCeEEEEcCC
Q 004479 597 PGVSDVIAELKDHARLRVMM--LTGDHESSAQRVANAVGINEVYCSL--KPEDK-----LNHVKRTSRDMGGGLIMVGEG 667 (750)
Q Consensus 597 ~~a~~~I~~Lk~~agi~v~m--lTGD~~~tA~~iA~~~GI~~v~a~~--~P~~K-----~~~V~~l~~~~g~~VamvGDG 667 (750)
....+.++.+|+ .|+++.+ ++=+++..+.. +.+.|.+.+.... .++.+ .+.++.+++.....+...| |
T Consensus 90 ~~~~~~i~~~~~-~g~~~~v~~~~~~t~~e~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~G-G 166 (202)
T cd04726 90 STIKKAVKAAKK-YGKEVQVDLIGVEDPEKRAK-LLKLGVDIVILHRGIDAQAAGGWWPEDDLKKVKKLLGVKVAVAG-G 166 (202)
T ss_pred HHHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHH-HHHCCCCEEEEcCcccccccCCCCCHHHHHHHHhhcCCCEEEEC-C
Confidence 356788999998 5998885 78888888877 7777887654321 12222 3455555542133454444 7
Q ss_pred cc--CHHHHHhCC-ccEEeC
Q 004479 668 IN--DAPALAAAT-VGIVLA 684 (750)
Q Consensus 668 ~N--DapAL~~Ad-VGIamg 684 (750)
+| ++..+.++. -|+.+|
T Consensus 167 I~~~~i~~~~~~Gad~vvvG 186 (202)
T cd04726 167 ITPDTLPEFKKAGADIVIVG 186 (202)
T ss_pred cCHHHHHHHHhcCCCEEEEe
Confidence 76 343443332 245555
No 250
>cd00210 PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Probab=22.30 E-value=96 Score=28.47 Aligned_cols=53 Identities=26% Similarity=0.379 Sum_probs=38.8
Q ss_pred CCCEEEEcCCC---ccccCcEEEe----cee---------------eeeeccccCCcceEeeccCCccCCCceec
Q 004479 252 VGSYILVGAGE---AVPVDCEVYQ----GTA---------------TITIEHLTGEVKPLEAKVGDRIPGGARNL 304 (750)
Q Consensus 252 ~GDiI~v~~Ge---~VPaDg~vl~----G~~---------------~Vdes~LTGEs~pv~k~~g~~v~aGt~~~ 304 (750)
.||=+-+.|-+ .=|+||+|.. +++ -+|+-.|.||..-...+.||.|-+|+.+.
T Consensus 25 lG~GvaI~P~~~~v~AP~~G~v~~i~~T~HA~~i~~~~G~eiLiHiGidTv~l~g~gF~~~vk~Gd~V~~G~~l~ 99 (124)
T cd00210 25 MGDGFAIKPSDGKVVAPVDGTIVQIFPTKHAIGIESDSGVEILIHIGIDTVKLNGEGFTSHVEEGQRVKQGDKLL 99 (124)
T ss_pred ccceEEEEccCCeEECcCCeEEEEEccCCCEEEEEeCCCcEEEEEeeeeeeecCCCceEEEecCCCEEcCCCEEE
Confidence 45555555533 2499999872 222 36888999999988899999999998765
No 251
>TIGR00830 PTBA PTS system, glucose subfamily, IIA component. These are part of the The PTS Glucose-Glucoside (Glc) SuperFamily. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). The IIA, IIB and IIC domains of all of the permeases listed below are demonstrably homologous. These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-c
Probab=22.14 E-value=94 Score=28.38 Aligned_cols=53 Identities=25% Similarity=0.299 Sum_probs=38.0
Q ss_pred CCCEEEEcCCC---ccccCcEEEe----ce---------------eeeeeccccCCcceEeeccCCccCCCceec
Q 004479 252 VGSYILVGAGE---AVPVDCEVYQ----GT---------------ATITIEHLTGEVKPLEAKVGDRIPGGARNL 304 (750)
Q Consensus 252 ~GDiI~v~~Ge---~VPaDg~vl~----G~---------------~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~ 304 (750)
.||=+-+.|-+ .-|+||+|.. ++ .=+|+-.|.||-.-...+.||.|-+|..+.
T Consensus 25 ~G~G~aI~P~~~~v~AP~~G~v~~v~~T~HA~gi~~~~G~evLiHiGidTV~L~G~gF~~~v~~Gd~V~~G~~l~ 99 (121)
T TIGR00830 25 VGDGFAILPTDGKVVAPVDGKIGKIFPTKHAFGIESDSGVEILIHIGIDTVKLNGEGFTSHVEEGQRVKKGDPLL 99 (121)
T ss_pred ccceEEEEcCCCeEEccCCeEEEEEccCCCEEEEEeCCCcEEEEEeeeceeecCCCceEEEecCCCEEcCCCEEE
Confidence 34555554433 3599999872 22 237889999999988889999998888765
No 252
>PLN02527 aspartate carbamoyltransferase
Probab=21.94 E-value=3.7e+02 Score=28.78 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=48.3
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC----CHhhHHHHHHHHHh----hcCCeEEEEcCC
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL----KPEDKLNHVKRTSR----DMGGGLIMVGEG 667 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~----~P~~K~~~V~~l~~----~~g~~VamvGDG 667 (750)
++.++++++-|-+. ..++++=.-...+...+|+...+.-|=|.. -|-|=+.=+-.+++ -.|.+|++|||+
T Consensus 83 gEs~~Dta~vls~y--~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~ 160 (306)
T PLN02527 83 GETLEDTIRTVEGY--SDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDL 160 (306)
T ss_pred CcCHHHHHHHHHHh--CcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCC
Confidence 57788888888874 567777777777889999998887555543 24443222222222 136799999999
Q ss_pred cc
Q 004479 668 IN 669 (750)
Q Consensus 668 ~N 669 (750)
.|
T Consensus 161 ~~ 162 (306)
T PLN02527 161 AN 162 (306)
T ss_pred CC
Confidence 66
No 253
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.94 E-value=1.8e+02 Score=31.03 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=37.8
Q ss_pred EecCCHhhHHHHHHHHHh-hcCCeEEEEcCCccC----HHHHH------hCCccEEeCCCCcHH--HHhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSR-DMGGGLIMVGEGIND----APALA------AATVGIVLAQRASAT--AIAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~-~~g~~VamvGDG~ND----apAL~------~AdVGIamg~~~s~~--A~~aADivL~ 700 (750)
|.-+||..=.++++.++- -.|+.|+++|-+..= +-+|. .|.|-++-.. ..+. ....|||++.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~-T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR-TDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC-CCCHHHHHhhCCEEEE
Confidence 445788777777766542 138999999997321 22343 2556665543 3333 3467999986
No 254
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.84 E-value=2e+02 Score=30.41 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=35.7
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCCccC----HHHHH--hCCccEEeCCCCcHHH--HhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEGIND----APALA--AATVGIVLAQRASATA--IAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG~ND----apAL~--~AdVGIamg~~~s~~A--~~aADivL~ 700 (750)
|.-+||..=.++++...-. .|+.|.++|-+..= +.+|. .|.|-+.-.. ..+.. ...|||++.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~-T~~l~~~~~~ADIvI~ 206 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR-TKDLPQVAKEADILVV 206 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-CCCHHHHHhhCCEEEE
Confidence 4566777666666554321 38999999998321 22333 2555555543 33332 356888875
No 255
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.33 E-value=1.8e+02 Score=30.78 Aligned_cols=64 Identities=20% Similarity=0.377 Sum_probs=41.9
Q ss_pred ecCCCchhHHHHHHHHHhcCCc---EEEEecCCCHHHHH------HHHHHcCCceEEecC----CHhhHHHHHHHHH
Q 004479 591 LEDRPRPGVSDVIAELKDHARL---RVMMLTGDHESSAQ------RVANAVGINEVYCSL----KPEDKLNHVKRTS 654 (750)
Q Consensus 591 ~~D~lr~~a~~~I~~Lk~~agi---~v~mlTGD~~~tA~------~iA~~~GI~~v~a~~----~P~~K~~~V~~l~ 654 (750)
+.+++|++.++.++.|+++.|. =..++-||++.+.. ..|+++||....-++ +.++=.+.++.|-
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN 87 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLN 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3567889999999999874344 24667788877654 457888997544333 4444455555553
No 256
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=21.22 E-value=7.3e+02 Score=25.82 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=53.7
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEE-ecCCC-HHHHHHHHHHc-CCceEEec--------CCHhhHHHHHHHHHhhcCCeE
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMM-LTGDH-ESSAQRVANAV-GINEVYCS--------LKPEDKLNHVKRTSRDMGGGL 661 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~m-lTGD~-~~tA~~iA~~~-GI~~v~a~--------~~P~~K~~~V~~l~~~~g~~V 661 (750)
|=+=++..+.++.+++ .|+..+. +|-.. .+..+.+++.. |...+.++ ..|.+=.+.++.+++. ...-
T Consensus 125 DLp~ee~~~~~~~~~~-~gl~~I~lvap~t~~eri~~i~~~s~gfIY~vs~~GvTG~~~~~~~~~~~~i~~vk~~-~~~p 202 (258)
T PRK13111 125 DLPPEEAEELRAAAKK-HGLDLIFLVAPTTTDERLKKIASHASGFVYYVSRAGVTGARSADAADLAELVARLKAH-TDLP 202 (258)
T ss_pred CCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCcccCCCccHHHHHHHHHhc-CCCc
Confidence 5455788899999998 5886555 77666 46677777765 33222111 2334445677777775 3455
Q ss_pred EEEcCCccC---HHHHHhCCccEEeC
Q 004479 662 IMVGEGIND---APALAAATVGIVLA 684 (750)
Q Consensus 662 amvGDG~ND---apAL~~AdVGIamg 684 (750)
.++|=|+++ +..+...-=|+.+|
T Consensus 203 v~vGfGI~~~e~v~~~~~~ADGviVG 228 (258)
T PRK13111 203 VAVGFGISTPEQAAAIAAVADGVIVG 228 (258)
T ss_pred EEEEcccCCHHHHHHHHHhCCEEEEc
Confidence 567999954 44443322245554
No 257
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.92 E-value=2e+02 Score=30.62 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=34.7
Q ss_pred EecCCHhhHHHHHHHHHhh-cCCeEEEEcCCccC----HHHHHh------CCccEEeCCCCcHHH--HhhcCEEEe
Q 004479 638 YCSLKPEDKLNHVKRTSRD-MGGGLIMVGEGIND----APALAA------ATVGIVLAQRASATA--IAVADVLLL 700 (750)
Q Consensus 638 ~a~~~P~~K~~~V~~l~~~-~g~~VamvGDG~ND----apAL~~------AdVGIamg~~~s~~A--~~aADivL~ 700 (750)
|.-+||..=.++++.+.-. .|+.|..+|-+.-= +.+|.+ |.|-++-.. ..+.. ...|||++.
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~-T~nl~~~~~~ADIvIs 210 (293)
T PRK14185 136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSR-SKNLKKECLEADIIIA 210 (293)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCC-CCCHHHHHhhCCEEEE
Confidence 4566777766666665421 38999999987211 223332 455555443 23322 346788774
No 258
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=20.84 E-value=6.5e+02 Score=25.35 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCCcEEE-Eec------------CCCHHHHHHHHHHcCCceEEecCC---HhhHH---HHHHHHHhhcCC
Q 004479 599 VSDVIAELKDHARLRVM-MLT------------GDHESSAQRVANAVGINEVYCSLK---PEDKL---NHVKRTSRDMGG 659 (750)
Q Consensus 599 a~~~I~~Lk~~agi~v~-mlT------------GD~~~tA~~iA~~~GI~~v~a~~~---P~~K~---~~V~~l~~~~g~ 659 (750)
+.-++..+++ .|.+|. ++| +...+.++.+|+.+||......++ +..-. ..++.++++ |.
T Consensus 10 S~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~~~l~~~l~~~~~~-g~ 87 (218)
T TIGR03679 10 SNYALYKALE-EGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEVEDLKGALKELKRE-GV 87 (218)
T ss_pred HHHHHHHHHH-cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHHHHHHHHHHHHHHc-CC
Confidence 3344555666 366663 333 456788999999999987666655 33322 333444444 65
Q ss_pred eEEEEcC
Q 004479 660 GLIMVGE 666 (750)
Q Consensus 660 ~VamvGD 666 (750)
.....||
T Consensus 88 ~~vv~G~ 94 (218)
T TIGR03679 88 EGIVTGA 94 (218)
T ss_pred CEEEECC
Confidence 5555565
No 259
>KOG3167 consensus Box H/ACA snoRNP component, involved in ribosomal RNA pseudouridinylation [RNA processing and modification]
Probab=20.71 E-value=77 Score=29.26 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.6
Q ss_pred cCCCchhHHHHHHHHHhcCCcEEEEecCCCHHH
Q 004479 592 EDRPRPGVSDVIAELKDHARLRVMMLTGDHESS 624 (750)
Q Consensus 592 ~D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~t 624 (750)
++.+|.+++++.+.+++ +-.-+++|+||-.-.
T Consensus 57 ~k~lrrGvKevqK~vrk-GeKGl~VlAgd~sPi 88 (153)
T KOG3167|consen 57 QKGLRRGVKEVQKRVRK-GEKGLCVLAGDTSPI 88 (153)
T ss_pred hhhHHHHHHHHHHHHhc-CCcceEEEecCCccH
Confidence 35689999999999998 677799999996543
No 260
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=20.65 E-value=1.3e+02 Score=33.92 Aligned_cols=48 Identities=17% Similarity=0.355 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCceEEecC--CHhhH
Q 004479 598 GVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSL--KPEDK 646 (750)
Q Consensus 598 ~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~v~a~~--~P~~K 646 (750)
...+.=++|++ .|++.++..||..+.-..++++.++..||+.. .|..+
T Consensus 62 sL~~L~~~L~~-~g~~L~v~~G~~~~vl~~L~~~~~~~~V~~~~~~~~~~~ 111 (429)
T TIGR02765 62 SLKDLRTSLRK-LGSDLLVRSGKPEDVLPELIKELGVRTVFLHQEVGSEEK 111 (429)
T ss_pred HHHHHHHHHHH-cCCCeEEEeCCHHHHHHHHHHHhCCCEEEEeccCCHHHH
Confidence 34455567777 59999999999999999999999999999875 44444
No 261
>COG3742 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.64 E-value=1.4e+02 Score=27.36 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=53.5
Q ss_pred CCCchhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCCce-EEecCCHhhHHHHHHHHHhhcCCeEEEEcCC
Q 004479 593 DRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINE-VYCSLKPEDKLNHVKRTSRDMGGGLIMVGEG 667 (750)
Q Consensus 593 D~lr~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI~~-v~a~~~P~~K~~~V~~l~~~~g~~VamvGDG 667 (750)
-.-.|.+.+.++.|...++.++.++|+|....|..--++-|=-. =-|+++=-|=...-- -|-. |...++-||.
T Consensus 47 rr~~p~a~~~vd~~l~~~~~~v~~i~~~~~~~A~~A~~rfGKg~~HpA~LN~GDCfsYA~-A~~~-~~pLL~KGnD 120 (131)
T COG3742 47 RRGGPEARRLVDLLLSEAGAQVVAVTADQARAALRAYRRFGKGRGHPAGLNFGDCFSYAL-AKLS-GQPLLYKGND 120 (131)
T ss_pred hhcCcHHHHHHHHHHHhcCCeEEeecHHHHHHHHHHHHHhCcCCCCcccccchhHHHHHH-HHhc-CCceEeecCC
Confidence 35566888999999988999999999999999999988888654 234444444433321 1223 7889999985
No 262
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=20.45 E-value=89 Score=32.00 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHcCC------------ceEEecCCHhhH--HHHHHHHHhhcCCeE
Q 004479 596 RPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGI------------NEVYCSLKPEDK--LNHVKRTSRDMGGGL 661 (750)
Q Consensus 596 r~~a~~~I~~Lk~~agi~v~mlTGD~~~tA~~iA~~~GI------------~~v~a~~~P~~K--~~~V~~l~~~~g~~V 661 (750)
-++..++++.|++ .|++. ++|......+.......|. ..+ ..-.|+.. ....+.+.......+
T Consensus 140 ~~~~~~~l~~l~~-~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~-~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 140 LDEFDELFAPIVA-RKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVI-YSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred HHHHHHHHHHHHh-CCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEe-cCCCCCHHHHHHHHHHcCCCCcccE
Confidence 4789999999987 58886 6677554444333333332 221 12233322 222233321102469
Q ss_pred EEEcCC-ccCHHHHHhCCcc
Q 004479 662 IMVGEG-INDAPALAAATVG 680 (750)
Q Consensus 662 amvGDG-~NDapAL~~AdVG 680 (750)
.||||. .+|..+=+.|.+-
T Consensus 217 ~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 217 LMVGDSFYTDILGANRLGID 236 (242)
T ss_pred EEECCCcHHHHHHHHHCCCe
Confidence 999999 5999988887764
No 263
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=20.08 E-value=5.2e+02 Score=26.76 Aligned_cols=80 Identities=15% Similarity=0.151 Sum_probs=54.1
Q ss_pred EEecCCCchhHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHHHcCCceEE-------ecCCHhhHHHHHHHHHhhcC
Q 004479 589 IHLEDRPRPGVSDVIAELKDHA---RLRVMMLTGDHESSAQRVANAVGINEVY-------CSLKPEDKLNHVKRTSRDMG 658 (750)
Q Consensus 589 i~~~D~lr~~a~~~I~~Lk~~a---gi~v~mlTGD~~~tA~~iA~~~GI~~v~-------a~~~P~~K~~~V~~l~~~~g 658 (750)
+.=.+.+-||..++++..+. . |..++-.+-|++..|+++++- |-+-|. .+.... ..++++.+++. -
T Consensus 99 i~d~~~Llpd~~~tv~aa~~-L~~~Gf~vlpyc~dd~~~ar~l~~~-G~~~vmPlg~pIGsg~Gi~-~~~~I~~I~e~-~ 174 (248)
T cd04728 99 IGDDKTLLPDPIETLKAAEI-LVKEGFTVLPYCTDDPVLAKRLEDA-GCAAVMPLGSPIGSGQGLL-NPYNLRIIIER-A 174 (248)
T ss_pred ecCccccccCHHHHHHHHHH-HHHCCCEEEEEeCCCHHHHHHHHHc-CCCEeCCCCcCCCCCCCCC-CHHHHHHHHHh-C
Confidence 33356678999999999887 7 998887889999999999865 655431 111111 25677777765 3
Q ss_pred CeEEEEcCCccCHH
Q 004479 659 GGLIMVGEGINDAP 672 (750)
Q Consensus 659 ~~VamvGDG~NDap 672 (750)
..-.+++=|++-..
T Consensus 175 ~vpVI~egGI~tpe 188 (248)
T cd04728 175 DVPVIVDAGIGTPS 188 (248)
T ss_pred CCcEEEeCCCCCHH
Confidence 44556676665544
Done!